<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-27 13:44:09"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E540619" ref_strand="+" ref_description="SGN-E540619 [TUS-60-P21](-)">
      <seq>ttgggacaacttcaacacacattgatgggataagaatatgcgaggacaacggagagttgactcatgtagatacagaaatgatagagatcagctcgccagaagttccacgaaaaagagtaagatttctggtgcctgagagcccacaaatggatgcaagtgttcgcgaagagttgcaagaacttatggaagctagggaagcagggatggcatttatacttggtcattgttatgttagagctaaaaggggttcaagtttgataaaaaagctggtgattaacataggatatgactttttaagaagaaattgtcgtggaccaacatatgcattgagcttccctcaagcttcaacattggaggttggaatgatctaccatgtataatttatgctttactttttttctaattaaaggatagaattgtagcatatgttttttgtttttttttgtatttcaaattcgaaaagctttgtaaatgttgtaatggtacacgagtttttgctttatacaaggcaataaattaaaaggaaatactgaactttagaggcaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="3409" stop="2265"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3109" g_stop="2564" g_length="546"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="546" r_length="546" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="547" polyA_stop="558"/>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E540619" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E540619" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3109" e_stop="2564"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGGACAACTTCAACACACATTGATGGGATAAGAATATGCGAGGACAACGGAGAGTTGACTCATGTAGATACAGAAATGATAGAGATCAGCTCGCCAGAAGTTCCACGAAAAAGAGTAAGATTTCTGGTGCCTGAGAGCCCACAAATGGATGCAAGTGTTCGCGAAGAGTTGCAAGAACTTATGGAAGCTAGGGAAGCAGGGATGGCATTTATACTTGGTCATTGTTATGTTAGAGCTAAAAGGGGTTCAAGTTTGATAAAAAAGCTGGTGATTAACATAGGATATGACTTTTTAAGAAGAAATTGTCGTGGACCAACATATGCATTGAGCTTCCCTCAAGCTTCAACATTGGAGGTTGGAATGATCTACCATGTATAATTTATGCTTTACTTTTTTTCTAATTAAAGGATAGAATTGTAGCATATGTTTTTTGTTTTTTTTTGTATTTCAAATTCGAAAAGCTTTGTAAATGTTGTAATGGTACACGAGTTTTTGCTTTATACAAGGCAATAAATTAAAAGGAAATACTGAACTTTAGAGGCAT</genome_strand>
        <mrna_strand>TTGGGACAACTTCAACACACATTGATGGGATAAGAATATGCGAGGACAACGGAGAGTTGACTCATGTAGATACAGAAATGATAGAGATCAGCTCGCCAGAAGTTCCACGAAAAAGAGTAAGATTTCTGGTGCCTGAGAGCCCACAAATGGATGCAAGTGTTCGCGAAGAGTTGCAAGAACTTATGGAAGCTAGGGAAGCAGGGATGGCATTTATACTTGGTCATTGTTATGTTAGAGCTAAAAGGGGTTCAAGTTTGATAAAAAAGCTGGTGATTAACATAGGATATGACTTTTTAAGAAGAAATTGTCGTGGACCAACATATGCATTGAGCTTCCCTCAAGCTTCAACATTGGAGGTTGGAATGATCTACCATGTATAATTTATGCTTTACTTTTTTTCTAATTAAAGGATAGAATTGTAGCATATGTTTTTTGTTTTTTTTTGTATTTCAAATTCGAAAAGCTTTGTAAATGTTGTAATGGTACACGAGTTTTTGCTTTATACAAGGCAATAAATTAAAAGGAAATACTGAACTTTAGAGGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E540621" ref_strand="+" ref_description="SGN-E540621 [TUS-60-P21]">
      <seq>ttgggacaacttcaacacacattgatgggataagaatatgcgaggacaacggagagttgactcatgtagatacagaaatgatagagatcagctcgccagaagttccacgaaaaagagtaagatttctggtgcctgagagcccacaaatggatgcaagtgttcgcgaagagttgcaagaacttatggaagctagggaagcagggatggcatttatacttggtcattgttatgttagagctaaaaggggttcaagtttgataaaaaagctggtgattaacataggatatgactttttaagaagaaattgtcgtggaccaacatatgcattgagcttccctcaagcttcaacattggaggttggaatgatctaccatgtataatttatgctttactttttttctaattaaaggatagaattgtagcatatgttttttgtttttttttgtatttcaaattcgaaaagctttgtaaatgttgtaatggtacacgagtttttgctttatacaaggcaataaattaaaaggaaatactgaactttagaggcaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="3409" stop="2265"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3109" g_stop="2564" g_length="546"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="546" r_length="546" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="547" polyA_stop="558"/>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E540621" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E540621" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3109" e_stop="2564"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGGACAACTTCAACACACATTGATGGGATAAGAATATGCGAGGACAACGGAGAGTTGACTCATGTAGATACAGAAATGATAGAGATCAGCTCGCCAGAAGTTCCACGAAAAAGAGTAAGATTTCTGGTGCCTGAGAGCCCACAAATGGATGCAAGTGTTCGCGAAGAGTTGCAAGAACTTATGGAAGCTAGGGAAGCAGGGATGGCATTTATACTTGGTCATTGTTATGTTAGAGCTAAAAGGGGTTCAAGTTTGATAAAAAAGCTGGTGATTAACATAGGATATGACTTTTTAAGAAGAAATTGTCGTGGACCAACATATGCATTGAGCTTCCCTCAAGCTTCAACATTGGAGGTTGGAATGATCTACCATGTATAATTTATGCTTTACTTTTTTTCTAATTAAAGGATAGAATTGTAGCATATGTTTTTTGTTTTTTTTTGTATTTCAAATTCGAAAAGCTTTGTAAATGTTGTAATGGTACACGAGTTTTTGCTTTATACAAGGCAATAAATTAAAAGGAAATACTGAACTTTAGAGGCAT</genome_strand>
        <mrna_strand>TTGGGACAACTTCAACACACATTGATGGGATAAGAATATGCGAGGACAACGGAGAGTTGACTCATGTAGATACAGAAATGATAGAGATCAGCTCGCCAGAAGTTCCACGAAAAAGAGTAAGATTTCTGGTGCCTGAGAGCCCACAAATGGATGCAAGTGTTCGCGAAGAGTTGCAAGAACTTATGGAAGCTAGGGAAGCAGGGATGGCATTTATACTTGGTCATTGTTATGTTAGAGCTAAAAGGGGTTCAAGTTTGATAAAAAAGCTGGTGATTAACATAGGATATGACTTTTTAAGAAGAAATTGTCGTGGACCAACATATGCATTGAGCTTCCCTCAAGCTTCAACATTGGAGGTTGGAATGATCTACCATGTATAATTTATGCTTTACTTTTTTTCTAATTAAAGGATAGAATTGTAGCATATGTTTTTTGTTTTTTTTTGTATTTCAAATTCGAAAAGCTTTGTAAATGTTGTAATGGTACACGAGTTTTTGCTTTATACAAGGCAATAAATTAAAAGGAAATACTGAACTTTAGAGGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E289621" ref_strand="+" ref_description="SGN-E289621 [cLET-4-H1]">
      <seq>tgggacaacttcaacacacattgatgggataagaatatgcgaggacaacggagagttgactcatgtagatacagaaatgatagagatcagctcgccagaagttccacgaaaaagagtaagatttctggtgcctgagagcccacaaatggatgcaagtgttcgcgaagagttgcaagaacttatggaagctagggaagcagggatggcatttatacttggtcattgttatgttagagctaaaaggggttcaagtttgataaaaaagctggtgattaacataggatatgactttttaagaagaaattgtcgtggaccaacatatgcattgagcttccctcaagcttcaacattggaggttggaatgatctaccatgtataatttatgctttactttttttctaattaaaggatagaattgtagcatatgttttttgtttttttttgtatttcaaattcgaaaagctttgtaaatgttgtaatggtacacgagtttttgctttatacaaggcaataaattaaaaggaaatactgaactttagaggcaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="3408" stop="2265"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3108" g_stop="2564" g_length="545"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="545" r_length="545" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="546" polyA_stop="557"/>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E289621" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>545</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E289621" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3108" e_stop="2564"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGACAACTTCAACACACATTGATGGGATAAGAATATGCGAGGACAACGGAGAGTTGACTCATGTAGATACAGAAATGATAGAGATCAGCTCGCCAGAAGTTCCACGAAAAAGAGTAAGATTTCTGGTGCCTGAGAGCCCACAAATGGATGCAAGTGTTCGCGAAGAGTTGCAAGAACTTATGGAAGCTAGGGAAGCAGGGATGGCATTTATACTTGGTCATTGTTATGTTAGAGCTAAAAGGGGTTCAAGTTTGATAAAAAAGCTGGTGATTAACATAGGATATGACTTTTTAAGAAGAAATTGTCGTGGACCAACATATGCATTGAGCTTCCCTCAAGCTTCAACATTGGAGGTTGGAATGATCTACCATGTATAATTTATGCTTTACTTTTTTTCTAATTAAAGGATAGAATTGTAGCATATGTTTTTTGTTTTTTTTTGTATTTCAAATTCGAAAAGCTTTGTAAATGTTGTAATGGTACACGAGTTTTTGCTTTATACAAGGCAATAAATTAAAAGGAAATACTGAACTTTAGAGGCAT</genome_strand>
        <mrna_strand>TGGGACAACTTCAACACACATTGATGGGATAAGAATATGCGAGGACAACGGAGAGTTGACTCATGTAGATACAGAAATGATAGAGATCAGCTCGCCAGAAGTTCCACGAAAAAGAGTAAGATTTCTGGTGCCTGAGAGCCCACAAATGGATGCAAGTGTTCGCGAAGAGTTGCAAGAACTTATGGAAGCTAGGGAAGCAGGGATGGCATTTATACTTGGTCATTGTTATGTTAGAGCTAAAAGGGGTTCAAGTTTGATAAAAAAGCTGGTGATTAACATAGGATATGACTTTTTAAGAAGAAATTGTCGTGGACCAACATATGCATTGAGCTTCCCTCAAGCTTCAACATTGGAGGTTGGAATGATCTACCATGTATAATTTATGCTTTACTTTTTTTCTAATTAAAGGATAGAATTGTAGCATATGTTTTTTGTTTTTTTTTGTATTTCAAATTCGAAAAGCTTTGTAAATGTTGTAATGGTACACGAGTTTTTGCTTTATACAAGGCAATAAATTAAAAGGAAATACTGAACTTTAGAGGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E294278" ref_strand="+" ref_description="SGN-E294278 [cLET-14-B22](-)">
      <seq>tcatcagtggacatacaagctctatcgctgacgaaaggtacgtagaagtagagtggatcgatgaaaagagagatgagacaggtaaggaggaagacatagttccagcgattgacgatatcgctgtttggatcgagaatttggcgccaccatggcacatcgttcgaaaatgatttgttcttcaaagattgctgtaaatgacggaggtgagacgccggctttgcaaatattctagtcatcttccatggcggagtccgatatcaaaatcggattccggaagattgtctctcttctggaaaacacaacagattccaataatttttttgtattatgaatgaaacagtgagtgaaaattagcgctagaaaagaaggaagaatgaattaagagtgttccattgaagctccttttttcatcaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="18502" stop="17488"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18202" g_stop="17788" g_length="415"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="415" r_length="415" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E294278" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>415</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E294278" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18202" e_stop="17788"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATCAGTGGACATACAAGCTCTATCGCTGACGAAAGGTACGTAGAAGTAGAGTGGATCGATGAAAAGAGAGATGAGACAGGTAAGGAGGAAGACATAGTTCCAGCGATTGACGATATCGCTGTTTGGATCGAGAATTTGGCGCCACCATGGCACATCGTTCGAAAATGATTTGTTCTTCAAAGATTGCTGTAAATGACGGAGGTGAGACGCCGGCTTTGCAAATATTCTAGTCATCTTCCATGGCGGAGTCCGATATCAAAATCGGATTCCGGAAGATTGTCTCTCTTCTGGAAAACACAACAGATTCCAATAATTTTTTTGTATTATGAATGAAACAGTGAGTGAAAATTAGCGCTAGAAAAGAAGGAAGAATGAATTAAGAGTGTTCCATTGAAGCTCCTTTTTTCATCAAA</genome_strand>
        <mrna_strand>TCATCAGTGGACATACAAGCTCTATCGCTGACGAAAGGTACGTAGAAGTAGAGTGGATCGATGAAAAGAGAGATGAGACAGGTAAGGAGGAAGACATAGTTCCAGCGATTGACGATATCGCTGTTTGGATCGAGAATTTGGCGCCACCATGGCACATCGTTCGAAAATGATTTGTTCTTCAAAGATTGCTGTAAATGACGGAGGTGAGACGCCGGCTTTGCAAATATTCTAGTCATCTTCCATGGCGGAGTCCGATATCAAAATCGGATTCCGGAAGATTGTCTCTCTTCTGGAAAACACAACAGATTCCAATAATTTTTTTGTATTATGAATGAAACAGTGAGTGAAAATTAGCGCTAGAAAAGAAGGAAGAATGAATTAAGAGTGTTCCATTGAAGCTCCTTTTTTCATCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E294277" ref_strand="+" ref_description="SGN-E294277 [cLET-14-B22]">
      <seq>tttgatgaaaaaaggagcttcaatggaacactcttaattcattcttccttcttttctagcgctaattttcactcactgtttcattcataatacaaaaaaattattggaatctgttgtgttttccagaagagagacaatcttccggaatccgattttgatatcggactccgccatggaagatgactagaatatttgcaaagccggcgtctcacctccgtcatttacagcaatctttgaagaacaaatcattttcgaacgatgtgccatggtggcgccaaattctcgatccaaacagcgatatcgtcaatcgctggaactatgtcttcctccttacctgtctcatctctcttttcatcgatccactctacttctacgtacctttcgtcagcgatagagcttgtatgtccactgatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="17488" stop="18502"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17788" g_stop="18202" g_length="415"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="415" r_length="415" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E294277" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>415</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E294277" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17788" e_stop="18202"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGATGAAAAAAGGAGCTTCAATGGAACACTCTTAATTCATTCTTCCTTCTTTTCTAGCGCTAATTTTCACTCACTGTTTCATTCATAATACAAAAAAATTATTGGAATCTGTTGTGTTTTCCAGAAGAGAGACAATCTTCCGGAATCCGATTTTGATATCGGACTCCGCCATGGAAGATGACTAGAATATTTGCAAAGCCGGCGTCTCACCTCCGTCATTTACAGCAATCTTTGAAGAACAAATCATTTTCGAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGATATCGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTCTTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATAGAGCTTGTATGTCCACTGATGA</genome_strand>
        <mrna_strand>TTTGATGAAAAAAGGAGCTTCAATGGAACACTCTTAATTCATTCTTCCTTCTTTTCTAGCGCTAATTTTCACTCACTGTTTCATTCATAATACAAAAAAATTATTGGAATCTGTTGTGTTTTCCAGAAGAGAGACAATCTTCCGGAATCCGATTTTGATATCGGACTCCGCCATGGAAGATGACTAGAATATTTGCAAAGCCGGCGTCTCACCTCCGTCATTTACAGCAATCTTTGAAGAACAAATCATTTTCGAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGATATCGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTCTTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATAGAGCTTGTATGTCCACTGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E374139" ref_strand="+" ref_description="SGN-E374139 [TUS-33-L1]">
      <seq>ttttcactcactgtttcattcataatacaaaaaaattattggaatctgttgtgttttccagaagagagataatcttccggaatccgattttgatatcggactccgccatggaagatgagtagaatatttgcaaagccggcgtctcacctccgtcatttacagcaatctttgaagaacaaatcattttcgaacgatgtgccatggtggcgccaaattctcgatccaaacagcgatatcgtcaatcgctggaactatgtcttcctccttacctgtctcatctctcttttcatcgatccactctacttctacgtacctttcgtcagcgatagagcttgtatgtccactgatgacgaagccgcccgtgaaattaccatctatcgttctctcaccgacatcttttacttccttcacattgccatgaagttccgcacagcttttgttgctccgagctctagggttttcggccggggtgagcttgttatggacccccgtgaaattgctatacgatatctcaaaactgatttcatcgttgattttacagctgctcttcccctgcctcaaattgttattcgctatgtaatcccagcagcaaaaagaaatggttcgggtcattccaaaagtacacttgcacttatcgttctcatacaatatgtgccaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="17553" stop="18882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17853" g_stop="18413" g_length="561"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="561" r_length="561" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18414" i_stop="18485" i_length="72">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18486" g_stop="18582" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="562" r_stop="658" r_length="97" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E374139" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>658</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E374139" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17853" e_stop="18413"/>
          <exon e_start="18486" e_stop="18582"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCACTCACTGTTTCATTCATAATACAAAAAAATTATTGGAATCTGTTGTGTTTTCCAGAAGAGAGACAATCTTCCGGAATCCGATTTTGATATCGGACTCCGCCATGGAAGATGACTAGAATATTTGCAAAGCCGGCGTCTCACCTCCGTCATTTACAGCAATCTTTGAAGAACAAATCATTTTCGAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGATATCGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTCTTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATAGAGCTTGTATGTCCACTGATGACGAAGCCGCCCGTGAAATTACCATCTATCGTTCTCTCACCGACATCTTTTACTTCCTTCACATTGCCATGAAGTTCCGCACAGCTTTTGTTGCTCCTAGCTCTAGGGTTTTCGGCCGGGGTGAGCTTGTTATGGATCCCCGTGAAATTGCTATACGATATCTCAAAACTGATTTCATCGTTGATTTTACAGCTGCTCTTCCCCTGCCTCAAGTCAGTACATATCCATTTAGTTTAATACTCTACTTTTATTATTGTTATTTTTAATTAATAGTGCCATTGCAGATTGTTATTCGCTATGTAATCCCAGCAGCCAAAAGAAATGGTTCGGGTCATTCCAAAAGTACACTTGCACTTATCGTTCTCATACAATATGTGCCAA</genome_strand>
        <mrna_strand>TTTTCACTCACTGTTTCATTCATAATACAAAAAAATTATTGGAATCTGTTGTGTTTTCCAGAAGAGAGATAATCTTCCGGAATCCGATTTTGATATCGGACTCCGCCATGGAAGATGAGTAGAATATTTGCAAAGCCGGCGTCTCACCTCCGTCATTTACAGCAATCTTTGAAGAACAAATCATTTTCGAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGATATCGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTCTTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATAGAGCTTGTATGTCCACTGATGACGAAGCCGCCCGTGAAATTACCATCTATCGTTCTCTCACCGACATCTTTTACTTCCTTCACATTGCCATGAAGTTCCGCACAGCTTTTGTTGCTCCGAGCTCTAGGGTTTTCGGCCGGGGTGAGCTTGTTATGGACCCCCGTGAAATTGCTATACGATATCTCAAAACTGATTTCATCGTTGATTTTACAGCTGCTCTTCCCCTGCCTCAA........................................................................ATTGTTATTCGCTATGTAATCCCAGCAGCAAAAAGAAATGGTTCGGGTCATTCCAAAAGTACACTTGCACTTATCGTTCTCATACAATATGTGCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E363008" ref_strand="+" ref_description="SGN-E363008 [cLPP-2-D5]">
      <seq>ttttcactcactgtttcattcataatacaaaaaaattattggaatctgttgtgttttccagaagagagataatcttccggaatccgattttgatatcggactccgccatggaagatgagtagaatatttgcaaagccggcgtctcacctccgtcatttacagcaatctttgaagaacaaatcattttcgaacgatgtgccatggtggcgccaaattctcgatccaaacagcgatatcgtcaatcgctggaactatgtcttcctccttacctgtctcatctctcttttcatcgatccactctacttctacgtacctttcgtcagcgatagagcttgtatgtccactgatgacgaagccgcccgtgaaattaccatctatcgttctctcaccgacatcttttacttccttcacattgccatgaagttccgcacagcttttgttgctccgagctctagggttttcggccggggtgagcttgttatggacccccgtgaaattgctatacgatatctcaaaactgatttcatcgttgattttacagctgctcttcccctgcctcaaattgttattcgctatgtaatcccagcagcaaaaagaaatggttcgggtcattccaaaagtacacttgcacttatcgttctcatacaatatgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="17553" stop="18878"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17853" g_stop="18413" g_length="561"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="561" r_length="561" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18414" i_stop="18485" i_length="72">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18486" g_stop="18578" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="562" r_stop="654" r_length="93" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E363008" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>654</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E363008" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17853" e_stop="18413"/>
          <exon e_start="18486" e_stop="18578"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCACTCACTGTTTCATTCATAATACAAAAAAATTATTGGAATCTGTTGTGTTTTCCAGAAGAGAGACAATCTTCCGGAATCCGATTTTGATATCGGACTCCGCCATGGAAGATGACTAGAATATTTGCAAAGCCGGCGTCTCACCTCCGTCATTTACAGCAATCTTTGAAGAACAAATCATTTTCGAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGATATCGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTCTTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATAGAGCTTGTATGTCCACTGATGACGAAGCCGCCCGTGAAATTACCATCTATCGTTCTCTCACCGACATCTTTTACTTCCTTCACATTGCCATGAAGTTCCGCACAGCTTTTGTTGCTCCTAGCTCTAGGGTTTTCGGCCGGGGTGAGCTTGTTATGGATCCCCGTGAAATTGCTATACGATATCTCAAAACTGATTTCATCGTTGATTTTACAGCTGCTCTTCCCCTGCCTCAAGTCAGTACATATCCATTTAGTTTAATACTCTACTTTTATTATTGTTATTTTTAATTAATAGTGCCATTGCAGATTGTTATTCGCTATGTAATCCCAGCAGCCAAAAGAAATGGTTCGGGTCATTCCAAAAGTACACTTGCACTTATCGTTCTCATACAATATGTG</genome_strand>
        <mrna_strand>TTTTCACTCACTGTTTCATTCATAATACAAAAAAATTATTGGAATCTGTTGTGTTTTCCAGAAGAGAGATAATCTTCCGGAATCCGATTTTGATATCGGACTCCGCCATGGAAGATGAGTAGAATATTTGCAAAGCCGGCGTCTCACCTCCGTCATTTACAGCAATCTTTGAAGAACAAATCATTTTCGAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGATATCGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTCTTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATAGAGCTTGTATGTCCACTGATGACGAAGCCGCCCGTGAAATTACCATCTATCGTTCTCTCACCGACATCTTTTACTTCCTTCACATTGCCATGAAGTTCCGCACAGCTTTTGTTGCTCCGAGCTCTAGGGTTTTCGGCCGGGGTGAGCTTGTTATGGACCCCCGTGAAATTGCTATACGATATCTCAAAACTGATTTCATCGTTGATTTTACAGCTGCTCTTCCCCTGCCTCAA........................................................................ATTGTTATTCGCTATGTAATCCCAGCAGCAAAAAGAAATGGTTCGGGTCATTCCAAAAGTACACTTGCACTTATCGTTCTCATACAATATGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E334656" ref_strand="+" ref_description="SGN-E334656 [cTOD-23-F7]">
      <seq>tttcattcataatacaaaaaaattattggaatctgttgtgttttccagaagagagacaatcttccggaatccgattttgatatcggactccgccatggaagatgactagaatatttgcaaagccggcgtctcacctccgtcatttacagcaatctttgaagaacaaatcattttcgaacgatgtgccatggtggcgccaaattctcgatccaaacagcgatatcgtcaatcgctggaactatgtcttcctccttacctgtctcatctctcttttcatcgatccactctacttctacgtacctttcgtcagcgatagagcttgtatgtccactgatgacgaagccgcccgtgaaattaccatctatcgttctctcaccgacatcttttacttccttcacattgccatgaagttccgcacagcttttgttgctcctagctctagggttttcggccggggtgagcttgttatggatccccgtgaaattgctatacgatatctcaaaactgatttcatcgttgattttacagctgctcttcccctgcctcaaattgttattcgctatgtaatcccagcagccaaaagaaatgtntcgggtcattccaaaagtacacttgcacttatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="17566" stop="18860"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17866" g_stop="18413" g_length="548"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="548" r_length="548" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18414" i_stop="18485" i_length="72">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18486" g_stop="18560" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="549" r_stop="623" r_length="75" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E334656" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>623</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E334656" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17866" e_stop="18413"/>
          <exon e_start="18486" e_stop="18560"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCATTCATAATACAAAAAAATTATTGGAATCTGTTGTGTTTTCCAGAAGAGAGACAATCTTCCGGAATCCGATTTTGATATCGGACTCCGCCATGGAAGATGACTAGAATATTTGCAAAGCCGGCGTCTCACCTCCGTCATTTACAGCAATCTTTGAAGAACAAATCATTTTCGAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGATATCGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTCTTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATAGAGCTTGTATGTCCACTGATGACGAAGCCGCCCGTGAAATTACCATCTATCGTTCTCTCACCGACATCTTTTACTTCCTTCACATTGCCATGAAGTTCCGCACAGCTTTTGTTGCTCCTAGCTCTAGGGTTTTCGGCCGGGGTGAGCTTGTTATGGATCCCCGTGAAATTGCTATACGATATCTCAAAACTGATTTCATCGTTGATTTTACAGCTGCTCTTCCCCTGCCTCAAGTCAGTACATATCCATTTAGTTTAATACTCTACTTTTATTATTGTTATTTTTAATTAATAGTGCCATTGCAGATTGTTATTCGCTATGTAATCCCAGCAGCCAAAAGAAATGGTTCGGGTCATTCCAAAAGTACACTTGCACTTATC</genome_strand>
        <mrna_strand>TTTCATTCATAATACAAAAAAATTATTGGAATCTGTTGTGTTTTCCAGAAGAGAGACAATCTTCCGGAATCCGATTTTGATATCGGACTCCGCCATGGAAGATGACTAGAATATTTGCAAAGCCGGCGTCTCACCTCCGTCATTTACAGCAATCTTTGAAGAACAAATCATTTTCGAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGATATCGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTCTTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATAGAGCTTGTATGTCCACTGATGACGAAGCCGCCCGTGAAATTACCATCTATCGTTCTCTCACCGACATCTTTTACTTCCTTCACATTGCCATGAAGTTCCGCACAGCTTTTGTTGCTCCTAGCTCTAGGGTTTTCGGCCGGGGTGAGCTTGTTATGGATCCCCGTGAAATTGCTATACGATATCTCAAAACTGATTTCATCGTTGATTTTACAGCTGCTCTTCCCCTGCCTCAA........................................................................ATTGTTATTCGCTATGTAATCCCAGCAGCCAAAAGAAATGTNTCGGGTCATTCCAAAAGTACACTTGCACTTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E330736" ref_strand="+" ref_description="SGN-E330736 [cTOD-8-F11]">
      <seq>aaaaaattattggaatctgttgtgttttccagaagagagacgatcttccggaatccgattttgatatcggactccgccatggaagatgactagaatatttgcaaagccggcgtctgacctccgtcatttacagcaatctttgaagaacaaatcattttcgaacgatgtgccatggtggcgccaaattctcgatccaaacagcgatatcgtcaatcgctggaactatgtcttgctccttacctgtctcatgtctcttttcatcgatccactctacttctacgtacctttcgtcagcgatcgagcttgtatgtccactgatgacgaagccgcccgtgaaattaccatctatcgttctctcaccgacatcttttacttgcttcacattgccatgaagttccgcacagctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="17582" stop="18590"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17882" g_stop="18290" g_length="409"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="409" r_length="409" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E330736" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>409</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E330736" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17882" e_stop="18290"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAATTATTGGAATCTGTTGTGTTTTCCAGAAGAGAGACAATCTTCCGGAATCCGATTTTGATATCGGACTCCGCCATGGAAGATGACTAGAATATTTGCAAAGCCGGCGTCTCACCTCCGTCATTTACAGCAATCTTTGAAGAACAAATCATTTTCGAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGATATCGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTCTTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATAGAGCTTGTATGTCCACTGATGACGAAGCCGCCCGTGAAATTACCATCTATCGTTCTCTCACCGACATCTTTTACTTCCTTCACATTGCCATGAAGTTCCGCACAGCTTTT</genome_strand>
        <mrna_strand>AAAAAATTATTGGAATCTGTTGTGTTTTCCAGAAGAGAGACGATCTTCCGGAATCCGATTTTGATATCGGACTCCGCCATGGAAGATGACTAGAATATTTGCAAAGCCGGCGTCTGACCTCCGTCATTTACAGCAATCTTTGAAGAACAAATCATTTTCGAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGATATCGTCAATCGCTGGAACTATGTCTTGCTCCTTACCTGTCTCATGTCTCTTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATCGAGCTTGTATGTCCACTGATGACGAAGCCGCCCGTGAAATTACCATCTATCGTTCTCTCACCGACATCTTTTACTTGCTTCACATTGCCATGAAGTTCCGCACAGCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E363811" ref_strand="+" ref_description="SGN-E363811 [cLPP-3-B20]">
      <seq>ttattggaatctgttgtgttttccagaagagagataatcttccggaatccgattttgatatcggactccgccatggaagatgagtagaatatttgcaaagccggcgtctcacctccgtcatttacagcaatctttgaagaacaaatcattttcgaacgatgtgccatggtggcgccaaattctcgatccaaacagcgatatcgtcaatcgctggaactatgtcttcctccttacctgtctcatctctcttttcatcgatccactctacttctacgtacctttcgtcagcgatagagcttgtatgtccactgatgacgaagccgcccgtgaaattaccatctatcgttctctcaccgacatcttttacttccttcacattgccatgaagttccgcacagcttttgttgctccgagctctagggttttcggccggggtgagcttgttatggacccccgtgaaattgctatacgatatctcaaaactgatttcatcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="17588" stop="18681"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17888" g_stop="18381" g_length="494"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="494" r_length="494" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E363811" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>494</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E363811" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17888" e_stop="18381"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTGGAATCTGTTGTGTTTTCCAGAAGAGAGACAATCTTCCGGAATCCGATTTTGATATCGGACTCCGCCATGGAAGATGACTAGAATATTTGCAAAGCCGGCGTCTCACCTCCGTCATTTACAGCAATCTTTGAAGAACAAATCATTTTCGAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGATATCGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTCTTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATAGAGCTTGTATGTCCACTGATGACGAAGCCGCCCGTGAAATTACCATCTATCGTTCTCTCACCGACATCTTTTACTTCCTTCACATTGCCATGAAGTTCCGCACAGCTTTTGTTGCTCCTAGCTCTAGGGTTTTCGGCCGGGGTGAGCTTGTTATGGATCCCCGTGAAATTGCTATACGATATCTCAAAACTGATTTCATCG</genome_strand>
        <mrna_strand>TTATTGGAATCTGTTGTGTTTTCCAGAAGAGAGATAATCTTCCGGAATCCGATTTTGATATCGGACTCCGCCATGGAAGATGAGTAGAATATTTGCAAAGCCGGCGTCTCACCTCCGTCATTTACAGCAATCTTTGAAGAACAAATCATTTTCGAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGATATCGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTCTTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATAGAGCTTGTATGTCCACTGATGACGAAGCCGCCCGTGAAATTACCATCTATCGTTCTCTCACCGACATCTTTTACTTCCTTCACATTGCCATGAAGTTCCGCACAGCTTTTGTTGCTCCGAGCTCTAGGGTTTTCGGCCGGGGTGAGCTTGTTATGGACCCCCGTGAAATTGCTATACGATATCTCAAAACTGATTTCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E330304" ref_strand="+" ref_description="SGN-E330304 [cTOD-4-N9]">
      <seq>ttgtgttttccagaagagagacaatcttccggaatccgattttgatatcggactccgccatggaagatgactagaatatttgcaaagccggcgtctcacctccgtcatttacagcaatctttgaagaacaaatcattttcgaacgatgtgccatggtggcgccaaattctcgatccaaacagcgatatcgtcaatcgctggaactatgtcttcctccttacctgtctcatctctcttttcatcgatccactctacttctacgtacctttcgtcagcgatagagcttgtatgtccactgatgacgaagccgcccgtgaaattaccatctatcgttctctcaccgacatcttttacttccttcacattgccatgaagttccgcacagcttttgttgctcctagctctagggttttcggccggggtgagcttgttatggatccccgtgaaattgctatacgatatctcaaaactgatttcatcgttgattttacagctgctcttcccctgcctcaaattgttattcgctatgtaatcccagcagccaaaagaaatggttcgggtcattccaaaagtacacttgcacttatcgttctcatacaatatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="17601" stop="18877"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17901" g_stop="18413" g_length="513"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="513" r_length="513" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18414" i_stop="18485" i_length="72">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18486" g_stop="18577" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="605" r_length="92" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E330304" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>605</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E330304" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17901" e_stop="18413"/>
          <exon e_start="18486" e_stop="18577"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTGTTTTCCAGAAGAGAGACAATCTTCCGGAATCCGATTTTGATATCGGACTCCGCCATGGAAGATGACTAGAATATTTGCAAAGCCGGCGTCTCACCTCCGTCATTTACAGCAATCTTTGAAGAACAAATCATTTTCGAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGATATCGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTCTTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATAGAGCTTGTATGTCCACTGATGACGAAGCCGCCCGTGAAATTACCATCTATCGTTCTCTCACCGACATCTTTTACTTCCTTCACATTGCCATGAAGTTCCGCACAGCTTTTGTTGCTCCTAGCTCTAGGGTTTTCGGCCGGGGTGAGCTTGTTATGGATCCCCGTGAAATTGCTATACGATATCTCAAAACTGATTTCATCGTTGATTTTACAGCTGCTCTTCCCCTGCCTCAAGTCAGTACATATCCATTTAGTTTAATACTCTACTTTTATTATTGTTATTTTTAATTAATAGTGCCATTGCAGATTGTTATTCGCTATGTAATCCCAGCAGCCAAAAGAAATGGTTCGGGTCATTCCAAAAGTACACTTGCACTTATCGTTCTCATACAATATGT</genome_strand>
        <mrna_strand>TTGTGTTTTCCAGAAGAGAGACAATCTTCCGGAATCCGATTTTGATATCGGACTCCGCCATGGAAGATGACTAGAATATTTGCAAAGCCGGCGTCTCACCTCCGTCATTTACAGCAATCTTTGAAGAACAAATCATTTTCGAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGATATCGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTCTTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATAGAGCTTGTATGTCCACTGATGACGAAGCCGCCCGTGAAATTACCATCTATCGTTCTCTCACCGACATCTTTTACTTCCTTCACATTGCCATGAAGTTCCGCACAGCTTTTGTTGCTCCTAGCTCTAGGGTTTTCGGCCGGGGTGAGCTTGTTATGGATCCCCGTGAAATTGCTATACGATATCTCAAAACTGATTTCATCGTTGATTTTACAGCTGCTCTTCCCCTGCCTCAA........................................................................ATTGTTATTCGCTATGTAATCCCAGCAGCCAAAAGAAATGGTTCGGGTCATTCCAAAAGTACACTTGCACTTATCGTTCTCATACAATATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E357653" ref_strand="+" ref_description="SGN-E357653 [cTOS-24-A18]">
      <seq>tccactgatgagaatagtacctaaatgcatgctgtagcttcatgctgtgaagacgtttaaattgaactgcaaaaaatttcaggtcttcagctcgaagtgcaaatgcttcaacttcagtaagtgttctcactgttcgagttgaagctggcaactgcgttgagttaggcagtaaggcccaagtcagcaattcttcaccacaaaaatcattaggtccaagggtgattgaattgaagaatccagatcttcccccatttgtcgtggagctctctagttgtcccctgatgataaagagcatctcactcactggatcatcttctagaacaacatatgtgcccattatgctcagggtcgacactaggcgttcacatattgcatcaagcaactggtcatccatttgctcaaaaaatggaacctgcgcagtcaggagattttggggtctctaaagcttagcaaacaaaagtggatgggtttaggcatttacagagtaaaaatacaactccaaacatgtggctgatgcaaatacaaaacgtaaggtacatcacaagacaagtcaaagcttaaattgatgactgaagagatggaactattttatttattcattcactaatacttattagtacttatttcttttgctcaaatctttaactactggcaaatatttctgcctgcagctcttttccttaatggttgcctccctgaagtatttcattnccagagaaagtgaatactgcnaacaccacatattacatcatctggctatgccatatatatatatatatctaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="22293" stop="20910"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21993" g_stop="21210" g_length="784"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="783" r_length="783" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E357653" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>784</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E357653" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21993" e_stop="21210"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCACTGATGAGAATAGTACCTAAATGCATGCTGTAGCTTCATGCTGTGAAGACGTTTAAATTGAACTGCAAAAAATTTCAGGTCTTCAGCTCGAAGTGCAAATGCTTCAACTTCAGTAAGTGTTCTCACTGTTCGAGTTGAAGCTGGCAACTGCGTTGAGTTAGGCAGTAAGGCCCAAGTCAGCAATTCTTCACCACAAAAATCATTAGGTCCAAGGGTGATTGAATTGAAGAATCCAGATCTTCCCCCATTTGTCGTGGAGCTCTCTAGTTGTCCCCTGATGATAAAGAGCATCTCACTCACTGGATCATCTTCTAGAACAACATATGTGCCCATTATGCTCAGGGTCGACACTAGGCGTTCACATATTGCATCAAGCAACTGGTCATCCATTTGCTCAAAAAATGGAACCTGCGCAGTCAGGAGATTTTGGGGTCTCTAAAGCTTAGCAAACAAAAGTGGATGGGTTTAGGCATTTACAGAGTAAAAATACAACTCCAAACATGTGGCTGATGCAAATACAAAACGTAAGGTACATCACAAGACAAGTCAAAGCTTAAATTGATGACTGAAGAGATGGAACTATTTTATTTATTCATTCACTAATACTTATTAGTACTTATTTCTTTTGCTCAAATCTTTAACTACTGGCAAATATTTCTGCCTGCAGCTCTTTTCCTTAATGTTTGCCTCCTGAAAGTATTTCAATTCCAAGAGAAGTGAAATACTGCAAACACCACATATTACATCATCTGGCTATGCCATATATATATATATATCTAA</genome_strand>
        <mrna_strand>TCCACTGATGAGAATAGTACCTAAATGCATGCTGTAGCTTCATGCTGTGAAGACGTTTAAATTGAACTGCAAAAAATTTCAGGTCTTCAGCTCGAAGTGCAAATGCTTCAACTTCAGTAAGTGTTCTCACTGTTCGAGTTGAAGCTGGCAACTGCGTTGAGTTAGGCAGTAAGGCCCAAGTCAGCAATTCTTCACCACAAAAATCATTAGGTCCAAGGGTGATTGAATTGAAGAATCCAGATCTTCCCCCATTTGTCGTGGAGCTCTCTAGTTGTCCCCTGATGATAAAGAGCATCTCACTCACTGGATCATCTTCTAGAACAACATATGTGCCCATTATGCTCAGGGTCGACACTAGGCGTTCACATATTGCATCAAGCAACTGGTCATCCATTTGCTCAAAAAATGGAACCTGCGCAGTCAGGAGATTTTGGGGTCTCTAAAGCTTAGCAAACAAAAGTGGATGGGTTTAGGCATTTACAGAGTAAAAATACAACTCCAAACATGTGGCTGATGCAAATACAAAACGTAAGGTACATCACAAGACAAGTCAAAGCTTAAATTGATGACTGAAGAGATGGAACTATTTTATTTATTCATTCACTAATACTTATTAGTACTTATTTCTTTTGCTCAAATCTTTAACTACTGGCAAATATTTCTGCCTGCAGCTCTTTTCCTTAATGGTTGCCTCCCTGAAGTATTTC-ATTNCCAGAGAAAGTGAATACTGCNAACACCACATATTACATCATCTGGCTATGCCATATATATATATATATCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E318767" ref_strand="+" ref_description="SGN-E318767 [cTOB-11-K13]">
      <seq>tttttactaataagtattagtgaatgaataaataaaatagttccatctcttcagtcatcaatttaagctttgacttgtcttgtgatgtaccttacgttttgtatttgcatcagccacatgtttggagttgtatttttactctgtaaatgcctaaacccatccacttttgtttgctaagctttagagaccccaaaatctcctgactgcgcaggttccattttttgagcaaatggatgaccagttgcttgatgcaatatgtgaacgcctagtgtcgaccctgagcataatgggcacatatgttgttctagaagatgatccagtgagtgagatgctctttatcatcaggggacaactagagagctccacgacaaatgggggaagatctggattcttcaattcaatcacccttggacctaatgatttttgcggtgaagaattgctgacttgggccttactgcctaactcaacgcagttgccagcttcaactcgaacagtgagaacacttactgaagttgaagcatttgcacttcgagctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="21075" stop="22206"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21371" g_stop="21906" g_length="536"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="536" r_length="536" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E318767" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E318767" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21371" e_stop="21906"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGTACTAATAAGTATTAGTGAATGAATAAATAAAATAGTTCCATCTCTTCAGTCATCAATTTAAGCTTTGACTTGTCTTGTGATGTACCTTACGTTTTGTATTTGCATCAGCCACATGTTTGGAGTTGTATTTTTACTCTGTAAATGCCTAAACCCATCCACTTTTGTTTGCTAAGCTTTAGAGACCCCAAAATCTCCTGACTGCGCAGGTTCCATTTTTTGAGCAAATGGATGACCAGTTGCTTGATGCAATATGTGAACGCCTAGTGTCGACCCTGAGCATAATGGGCACATATGTTGTTCTAGAAGATGATCCAGTGAGTGAGATGCTCTTTATCATCAGGGGACAACTAGAGAGCTCCACGACAAATGGGGGAAGATCTGGATTCTTCAATTCAATCACCCTTGGACCTAATGATTTTTGTGGTGAAGAATTGCTGACTTGGGCCTTACTGCCTAACTCAACGCAGTTGCCAGCTTCAACTCGAACAGTGAGAACACTTACTGAAGTTGAAGCATTTGCACTTCGAGCTG</genome_strand>
        <mrna_strand>TTTTTACTAATAAGTATTAGTGAATGAATAAATAAAATAGTTCCATCTCTTCAGTCATCAATTTAAGCTTTGACTTGTCTTGTGATGTACCTTACGTTTTGTATTTGCATCAGCCACATGTTTGGAGTTGTATTTTTACTCTGTAAATGCCTAAACCCATCCACTTTTGTTTGCTAAGCTTTAGAGACCCCAAAATCTCCTGACTGCGCAGGTTCCATTTTTTGAGCAAATGGATGACCAGTTGCTTGATGCAATATGTGAACGCCTAGTGTCGACCCTGAGCATAATGGGCACATATGTTGTTCTAGAAGATGATCCAGTGAGTGAGATGCTCTTTATCATCAGGGGACAACTAGAGAGCTCCACGACAAATGGGGGAAGATCTGGATTCTTCAATTCAATCACCCTTGGACCTAATGATTTTTGCGGTGAAGAATTGCTGACTTGGGCCTTACTGCCTAACTCAACGCAGTTGCCAGCTTCAACTCGAACAGTGAGAACACTTACTGAAGTTGAAGCATTTGCACTTCGAGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E308495" ref_strand="+" ref_description="SGN-E308495 [cLEY-21-O22]">
      <seq>tggagacgagaaaattaaatagagatggagaagaagagataagaatcggagcaacgtcaagaattcagatacagagtaatttttggacagagacagatttgctgctgctaaaaatgcagaggtcttcagctcgaagtgcaaatgcttcaacttcagtaagtgttctcactgttcgagttgaagctggcaactgcgttgagttaggcagtaaggcccaagtcagcaattcttcaccacaaaaatcattaggtccaagggtgattgaattgaagaatccagatcttcccccatttgtcgtggagctctctagttgtcccctgatgataaagagcatctcactcactggatcatcttctagaacaacatatgtgcccattatgctcagggtcgacactaggcgttcacatattgcatcaagcaactggtcatccatttgctcaaaaaatggaacctgcgcagtcaggagattttggggtctctaaagcttagcaaacaaaagtggatgggtttaggcatttacagagtaaaaatacaactccaaacatgtggctgatgcaaatacaaaacgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="23194" stop="21164"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22894" g_stop="22774" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22773" i_stop="21912" i_length="862">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.821" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21911" g_stop="21464" g_length="448"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="569" r_length="448" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E308495" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E308495" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22894" e_stop="22774"/>
          <exon e_start="21911" e_stop="21464"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGACGAGAAAATTAAATAGAGATGGAGAAGAAGAGATAAGAATCGGAGCAACGTCAAGAATTCAGATACAGAGTAATTTTTGGACAGAGACAGATTTGCTGCTGCTAAAAATGCAGAGGTAGTCTAACTACTTGCACGTCATCAATTAGCTGATTCATTAGATATAAGCTTATCCCTTTTCTTCTCTGTGTTCCATTCCACTATTCCTTTCCTGAACCCTATGAAAAAAATATTGCCTTCTTTTTTTTCTGTCCAATCAAAAACAATCTAATATGTACAGGTAAAACTTACCCACAATATGTTTGGCGTAAACATCCGGTACGGGTAAGTTTTTTCCAATATTACCTTTGGAACTAGATAACTTTTAGGCACAATCAACTAGAAAAGAAGGTTGTATTTCACATGATTGAAAAGGGAATAATGTTGTAATCAAAAAGGCCTATAGTTCCTGAAATTTACAAAAAAGTTTTAAAAAAAAGGGTACTAGCTTTGTCATTACTCACCAGTCACCAGTACCTTTCAGTAATGCAAGGTGTTCTAACTAATTACATATGATGTGGCCTTCATTCTGCAGAAAAATCAGGCTCATCTGGCTTAAACAGCTTGGGCATTTTTAAGCTAGAAGAAGAATCAGCCATCTTCTGTTCTATTCCTCTTCTCGTATTAGTAGCAAATCGTTTGGCCAAAATTGTAGCTCCAAGTTGTTGGGAACCACGAGAACCACTGGCTACTAACGGTTGCTCAGGACCAGCGTCATCAAAACTTTGCTCATTGTAGTTACCCTCATCATTAGGATCTTGATTATAATAATAGCTCTCTTGTAGAGCCAACTCGTATTCCATCTTTTTCTTCTTATACCTTCTCCATGCAGCCTGTATAAAACAAGCACCCCATGTTCTCCACTGATGAGAATAGTACCTAAATGCATGCTGTAGCTTCATGCTGTGAAGACGTTTAAATTGAACTGCAAAAAATTTCAGGTCTTCAGCTCGAAGTGCAAATGCTTCAACTTCAGTAAGTGTTCTCACTGTTCGAGTTGAAGCTGGCAACTGCGTTGAGTTAGGCAGTAAGGCCCAAGTCAGCAATTCTTCACCACAAAAATCATTAGGTCCAAGGGTGATTGAATTGAAGAATCCAGATCTTCCCCCATTTGTCGTGGAGCTCTCTAGTTGTCCCCTGATGATAAAGAGCATCTCACTCACTGGATCATCTTCTAGAACAACATATGTGCCCATTATGCTCAGGGTCGACACTAGGCGTTCACATATTGCATCAAGCAACTGGTCATCCATTTGCTCAAAAAATGGAACCTGCGCAGTCAGGAGATTTTGGGGTCTCTAAAGCTTAGCAAACAAAAGTGGATGGGTTTAGGCATTTACAGAGTAAAAATACAACTCCAAACATGTGGCTGATGCAAATACAAAACGT</genome_strand>
        <mrna_strand>TGGAGACGAGAAAATTAAATAGAGATGGAGAAGAAGAGATAAGAATCGGAGCAACGTCAAGAATTCAGATACAGAGTAATTTTTGGACAGAGACAGATTTGCTGCTGCTAAAAATGCAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTCAGCTCGAAGTGCAAATGCTTCAACTTCAGTAAGTGTTCTCACTGTTCGAGTTGAAGCTGGCAACTGCGTTGAGTTAGGCAGTAAGGCCCAAGTCAGCAATTCTTCACCACAAAAATCATTAGGTCCAAGGGTGATTGAATTGAAGAATCCAGATCTTCCCCCATTTGTCGTGGAGCTCTCTAGTTGTCCCCTGATGATAAAGAGCATCTCACTCACTGGATCATCTTCTAGAACAACATATGTGCCCATTATGCTCAGGGTCGACACTAGGCGTTCACATATTGCATCAAGCAACTGGTCATCCATTTGCTCAAAAAATGGAACCTGCGCAGTCAGGAGATTTTGGGGTCTCTAAAGCTTAGCAAACAAAAGTGGATGGGTTTAGGCATTTACAGAGTAAAAATACAACTCCAAACATGTGGCTGATGCAAATACAAAACGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E374138" ref_strand="+" ref_description="SGN-E374138 [TUS-33-L1](-)">
      <seq>attcaatcacccttggacctaatattttttgtgggaagaaatgctgacatgggccttactgcctaactcaacgcagttgccagcttcaactcgaacagtgagaacacttactgaagttgaagcatttgcacttcgagctgaagacctgaaattttttgcagttcaatttaaacgtcttcacagcatgaagctacagcatgcatttaggtactattctcatcagtggagaacatggggtgcttgttttatagaggctgcatggagaaggtataagaagaaaaagatggaacacgagttggctctacaagagagctattattataatcaagatcctaatgatgagggtaactacaatgagcaaagttttgatgacgctggtcctgagcaaccgttagtagccagtggttctcgtggttcccaacaacttggagctacaattttggccaaacgatttgctactaatacgagacgaggaatagaacagaagatggctgattcttcttctagcttaaaaatgcccaagctgtttaagccagatgagcctgatttttctgcagaatgaaggccacattatatgtaattagttagaacaccttgcattactgaaaggtactggtgactggtgagtaatgacaaagctagtacccttttttttaaaacttttttgtaaatttcaggaactataggcctttttgattacaacattattcccttttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="21466" stop="22785"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21766" g_stop="22489" g_length="724"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="723" r_length="723" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E374138" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>724</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E374138" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21766" e_stop="22489"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCAATCACCCTTGGACCTAATGATTTTTGTGGTGAAGAATTGCTGACTTGGGCCTTACTGCCTAACTCAACGCAGTTGCCAGCTTCAACTCGAACAGTGAGAACACTTACTGAAGTTGAAGCATTTGCACTTCGAGCTGAAGACCTGAAATTTTTTGCAGTTCAATTTAAACGTCTTCACAGCATGAAGCTACAGCATGCATTTAGGTACTATTCTCATCAGTGGAGAACATGGGGTGCTTGTTTTATACAGGCTGCATGGAGAAGGTATAAGAAGAAAAAGATGGAATACGAGTTGGCTCTACAAGAGAGCTATTATTATAATCAAGATCCTAATGATGAGGGTAACTACAATGAGCAAAGTTTTGATGACGCTGGTCCTGAGCAACCGTTAGTAGCCAGTGGTTCTCGTGGTTCCCAACAACTTGGAGCTACAATTTTGGCCAAACGATTTGCTACTAATACGAGAAGAGGAATAGAACAGAAGATGGCTGATTCTTCTTCTAGCTTAAAAATGCCCAAGCTGTTTAAGCCAGATGAGCCTGATTTTTCTGCAGAATGAAGGCCACATCATATGTAATTAGTTAGAACACCTTGCATTACTGAAAGGTACTGGTGACTGGTGAGTAATGACAAAGCTAGTACCCTTTTTTTTAAAACTTTTTTGTAAATTTCAGGAACTATAGGCCTTTTTGATTACAACATTATTCCCTTTTCAATCAT</genome_strand>
        <mrna_strand>ATTCAATCACCCTTGGACCTAATATTTTTTGTGG-GAAGAAATGCTGACATGGGCCTTACTGCCTAACTCAACGCAGTTGCCAGCTTCAACTCGAACAGTGAGAACACTTACTGAAGTTGAAGCATTTGCACTTCGAGCTGAAGACCTGAAATTTTTTGCAGTTCAATTTAAACGTCTTCACAGCATGAAGCTACAGCATGCATTTAGGTACTATTCTCATCAGTGGAGAACATGGGGTGCTTGTTTTATAGAGGCTGCATGGAGAAGGTATAAGAAGAAAAAGATGGAACACGAGTTGGCTCTACAAGAGAGCTATTATTATAATCAAGATCCTAATGATGAGGGTAACTACAATGAGCAAAGTTTTGATGACGCTGGTCCTGAGCAACCGTTAGTAGCCAGTGGTTCTCGTGGTTCCCAACAACTTGGAGCTACAATTTTGGCCAAACGATTTGCTACTAATACGAGACGAGGAATAGAACAGAAGATGGCTGATTCTTCTTCTAGCTTAAAAATGCCCAAGCTGTTTAAGCCAGATGAGCCTGATTTTTCTGCAGAATGAAGGCCACATTATATGTAATTAGTTAGAACACCTTGCATTACTGAAAGGTACTGGTGACTGGTGAGTAATGACAAAGCTAGTACCCTTTTTTTTAAAACTTTTTTGTAAATTTCAGGAACTATAGGCCTTTTTGATTACAACATTATTCCCTTTTCAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E279612" ref_strand="+" ref_description="SGN-E279612 [cLER-5-C15]">
      <seq>acaagagagctattattataatcaagatcctaatgatgagggtaactacaatgagcaaagttttgatgacgctggtcctgagcaaccgttagtagccagtggttctcgtggttcccaacaacttggagctacaattttggccaaacgatttgctactaatacgagaagaggaatagaacagaagatggctgattcttcttctagcttaaaaatgcccaagctgtttaagccagatgagcctgatttttctgcagaatgaaggccacatcatatgtaattagttagaacaccttgcattactgaaaggtactggtgactggtgagtaatgacaaagctagtacccttttttttaaaacttttttgtaaatttcaggaactataggcctttttgattacaacattattcccttttcaatcatgtgaaatacaaccttcttttctagttgattgtgcctaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="21770" stop="22829"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22070" g_stop="22529" g_length="460"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="460" r_length="460" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22530" i_stop="22643" i_length="114">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.898" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22644" g_stop="22649" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="466" r_length="6" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E279612" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>466</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E279612" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22070" e_stop="22529"/>
          <exon e_start="22644" e_stop="22649"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAGAGAGCTATTATTATAATCAAGATCCTAATGATGAGGGTAACTACAATGAGCAAAGTTTTGATGACGCTGGTCCTGAGCAACCGTTAGTAGCCAGTGGTTCTCGTGGTTCCCAACAACTTGGAGCTACAATTTTGGCCAAACGATTTGCTACTAATACGAGAAGAGGAATAGAACAGAAGATGGCTGATTCTTCTTCTAGCTTAAAAATGCCCAAGCTGTTTAAGCCAGATGAGCCTGATTTTTCTGCAGAATGAAGGCCACATCATATGTAATTAGTTAGAACACCTTGCATTACTGAAAGGTACTGGTGACTGGTGAGTAATGACAAAGCTAGTACCCTTTTTTTTAAAACTTTTTTGTAAATTTCAGGAACTATAGGCCTTTTTGATTACAACATTATTCCCTTTTCAATCATGTGAAATACAACCTTCTTTTCTAGTTGATTGTGCCTAAAAGTTATCTAGTTCCAAAGGTAATATTGGAAAAAACTTACCCGTACCGGATGTTTACGCCAAACATATTGTGGGTAAGTTTTACCTGTACATATTAGATTGTTTTTGATTGGACAGAAAAAA</genome_strand>
        <mrna_strand>ACAAGAGAGCTATTATTATAATCAAGATCCTAATGATGAGGGTAACTACAATGAGCAAAGTTTTGATGACGCTGGTCCTGAGCAACCGTTAGTAGCCAGTGGTTCTCGTGGTTCCCAACAACTTGGAGCTACAATTTTGGCCAAACGATTTGCTACTAATACGAGAAGAGGAATAGAACAGAAGATGGCTGATTCTTCTTCTAGCTTAAAAATGCCCAAGCTGTTTAAGCCAGATGAGCCTGATTTTTCTGCAGAATGAAGGCCACATCATATGTAATTAGTTAGAACACCTTGCATTACTGAAAGGTACTGGTGACTGGTGAGTAATGACAAAGCTAGTACCCTTTTTTTTAAAACTTTTTTGTAAATTTCAGGAACTATAGGCCTTTTTGATTACAACATTATTCCCTTTTCAATCATGTGAAATACAACCTTCTTTTCTAGTTGATTGTGCCTAAAA..................................................................................................................AAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E253442" ref_strand="+" ref_description="SGN-E253442 [cLEG-24-D6]">
      <seq>acctatcatttttttgaaaaattaactttaatgaaagtgaaatccaaaccaggtgagagatataaaaaaaaaaaaaggaaaagagagagtacctaaattaagatgccagtccattcttttgcacataaacagtagtaaagaccgtagtataaataccttgaagtgcgaagctgagaaatgatccgtcgtgtatgagtattcattgctggagaccgagaaaattaaatagagatggagaagaagagataagaatcggagcaacgtcaagaattcagataccagagtaatttttggaccagagaccagatttgctgctgctaaaaatgcagagaaaaatcaggctcatctggcttaaacagcttgggcatttttaagctagaagaagaatcagccatcttctgttctattcctcttctcgtattagtagcaaatcgtttggccaaaattgtagctccaagttgttgggaaccacgagaaccactggctactaacggttgctcaggaccagcgtcatcaaaactttgctcattgtagttaccctcatcattaggatcttgattataataatagctctctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="23395" stop="21772"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23095" g_stop="22774" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22773" i_stop="22318" i_length="456">
            <donor d_prob="0.967" d_score="0.92"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22317" g_stop="22072" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="577" r_length="246" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E253442" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E253442" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23095" e_stop="22774"/>
          <exon e_start="22317" e_stop="22072"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTATCATTTTTTTGAAAAATTAACTTTAATGAAAGTGAAATCCAAA-CAGGTGAGAGATATAAAAAAAAAAAAAGGAAAAGAGAGAGTA-CTAAATTAAGATG-CAGTCCATTCTTTTGCACATAAACAGTAGTAAAGA-CGTAGTATAAATA-CTTGAAGTGCGAAGCTGAGAAATGATCCGTCGTGTATGAGTATTCATTGCTGGAGA-CGAGAAAATTAAATAGAGATGGAGAAGAAGAGATAAGAATCGGAGCAACGTCAAGAATTCAGATA-CAGAGTAATTTTTGGA-CAGAGA-CAGATTTGCTGCTGCTAAAAATGCAGAGGTAGTCTAACTACTTGCACGTCATCAATTAGCTGATTCATTAGATATAAGCTTATCCCTTTTCTTCTCTGTGTTCCATTCCACTATTCCTTTCCTGAACCCTATGAAAAAAATATTGCCTTCTTTTTTTTCTGTCCAATCAAAAACAATCTAATATGTACAGGTAAAACTTACCCACAATATGTTTGGCGTAAACATCCGGTACGGGTAAGTTTTTTCCAATATTACCTTTGGAACTAGATAACTTTTAGGCACAATCAACTAGAAAAGAAGGTTGTATTTCACATGATTGAAAAGGGAATAATGTTGTAATCAAAAAGGCCTATAGTTCCTGAAATTTACAAAAAAGTTTTAAAAAAAAGGGTACTAGCTTTGTCATTACTCACCAGTCACCAGTACCTTTCAGTAATGCAAGGTGTTCTAACTAATTACATATGATGTGGCCTTCATTCTGCAGAAAAATCAGGCTCATCTGGCTTAAACAGCTTGGGCATTTTTAAGCTAGAAGAAGAATCAGCCATCTTCTGTTCTATTCCTCTTCTCGTATTAGTAGCAAATCGTTTGGCCAAAATTGTAGCTCCAAGTTGTTGGGAACCACGAGAACCACTGGCTACTAACGGTTGCTCAGGACCAGCGTCATCAAAACTTTGCTCATTGTAGTTACCCTCATCATTAGGATCTTGATTATAATAATAGCTCTCTT</genome_strand>
        <mrna_strand>ACCTATCATTTTTTTGAAAAATTAACTTTAATGAAAGTGAAATCCAAACCAGGTGAGAGATATAAAAAAAAAAAAAGGAAAAGAGAGAGTACCTAAATTAAGATGCCAGTCCATTCTTTTGCACATAAACAGTAGTAAAGACCGTAGTATAAATACCTTGAAGTGCGAAGCTGAGAAATGATCCGTCGTGTATGAGTATTCATTGCTGGAGACCGAGAAAATTAAATAGAGATGGAGAAGAAGAGATAAGAATCGGAGCAACGTCAAGAATTCAGATACCAGAGTAATTTTTGGACCAGAGACCAGATTTGCTGCTGCTAAAAATGCAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAATCAGGCTCATCTGGCTTAAACAGCTTGGGCATTTTTAAGCTAGAAGAAGAATCAGCCATCTTCTGTTCTATTCCTCTTCTCGTATTAGTAGCAAATCGTTTGGCCAAAATTGTAGCTCCAAGTTGTTGGGAACCACGAGAACCACTGGCTACTAACGGTTGCTCAGGACCAGCGTCATCAAAACTTTGCTCATTGTAGTTACCCTCATCATTAGGATCTTGATTATAATAATAGCTCTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E727424" ref_strand="+" ref_description="SGN-E727424 [LA14CF05]">
      <seq>cggttcaattttgaatgctctctctttatgtaaacattatgctttgtatgaaataaaggtcctctaagatttctgtaagcaactttgaaaatttctttaggtactccaactactggagaaagggtatcagaaggttttgtagcagtgccgtggtgcatgaagagccaatcactccacctgttgaggttaaatataatcagcttctcattaatggacagtttgttgatgcagcctcagggaagacatttcctacatttgaccctcgaacaggcgaagctattactacggttgcggaggccgacactgaagatgtcaaccgtgcagtctttgctgcccgtaaagcatttgatgaaggaccatggcctaaaatgacttgaaaggtcatgtataatgttgcagtttgctgatttgcttgagaggcacagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttaagaaaataagaaaaatggcgttatgtttccttttgacagtttaataaccacttattgtatatcaattgacgttctaatgtttgctgaatcaccctaaatgcttttctaagtatttctgcttacatttcttattcaggttgggctgataaaattcatggtcttacagctcctgctgacagtttgcaccatgttcagaccctgcatgagccaattggtgttgcaggacagataataccctggaattttccgttattaatgttcgcctggaaagttggccctgcacttgcttgtggtaacacggtcgtactaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="26119" stop="29776"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26419" g_stop="26514" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26515" i_stop="28196" i_length="1682">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.901" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28197" g_stop="28337" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="237" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28338" i_stop="28416" i_length="79">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.750" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28417" g_stop="28554" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="375" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28555" i_stop="29006" i_length="452">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.922" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29007" g_stop="29476" g_length="470"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="845" r_length="470" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E727424" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>845</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E727424" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26419" e_stop="26514"/>
          <exon e_start="28197" e_stop="28337"/>
          <exon e_start="28417" e_stop="28554"/>
          <exon e_start="29007" e_stop="29476"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAACAATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCTGTAAGTTCTTCTTTATTTAAATTCCGCAACTATGAAAATGGTAAGGAAAGAGTATGATTGTAGCTTCTCTTGTTCACTGATGACATGACAGTGTGAATAATTTTGATCAACTATGATTTAATCAGTTAAAAGTAATCTATTTATCTTATTTTTGAAATGACTAGTTTGGCTTTAGATGGTACTATAAAGTAGACCTCATTATTTTAGGTTACGCAGAGTGTTTACTTGATTGTCTAAACAAAATTTAGAAATAAATTTTGAACCTAAGCTAAACACAGAGTTAAAGGGTTTCATTTAATCATTAAATTTGTCCTCCGTTATAGTTCTTTTAAGGGAAAGCTCCGAATCAACCCATTTTATCCAAAAATGAAAAGATAAAACCACCCGCCCCTAATATAACCCGCATCCGACCAACTAACATGTAAAACCCACCCAAGTCCAAAGAAAGCAAAACTAACCCTTTAACGGCGGCGGCGGCGGCAGCGACGGCGCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTATTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAGGTGACATAGTACTTTGCTGGGTTTTGAGGAAACTGGAACAGTATTTGTTTTTTAATCATAATGTTGAGTTTATTTAATTTGGTTCGGATTTTAATTTGATGGGTTTGCGGTCGGATTCATTCTAACCAATAAAAGAATGTTGATGGTTATTTTATCTCCAATAACTATATTGCAAGTACTTGTAAACCAAAAATACATTCACAGATTATAATTAAAGTAGTCTTTTTCTAATCAGAAGAATTATTTTCACCCGTGTTTTCTTTCTTTGGTATCTTGATGATTGAACAAGCTAACTGTGTCTTGATATTACCCCACTTGATTTGTTTGATATTTTAACTGATTTTCTTGAGAAAGGAGCTAGCTAATTATAGGTTCTGCAATTTCAATCTACAGTTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAGGTTGACCTAAAGTCTTTTCATTTATATGTTATTTCTTCTATAAATCTCAAGTGTAATATGGAGAATTCTACGTCTTCAGGGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAA</genome_strand>
        <mrna_strand>CGGTTCAATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG...............................................................................GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACGGTCGTACTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E726097" ref_strand="+" ref_description="SGN-E726097 [LA10BC03]">
      <seq>gaacaattttgaatgctctctctttatgtaaacattatgctttgtatgaaataaaggtcctctaagatttctgtaagcaactttgaaaatttctttaggtactccaactactggagaaagggtatcagaaggttttgtagcagtgccgtggtgcatgaagagccaatcactccacctgttgaggttaaatataatcagcttctcattaatggacagtttgttgatgcagcctcagggaagacatttcctacatttgaccctcgaacaggcgaagctattactacggttgcggaggccgacactgaagatgtcaaccgtgcagtctttgctgcccgtaaagcatttgatgaaggaccatggcctaaaatgacttgaaaggtcatgtataatgttgcagtttgctgatttgcttgagaggcacagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcaatactat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="26121" stop="29456"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26421" g_stop="26514" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26515" i_stop="28196" i_length="1682">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.901" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28197" g_stop="28337" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="235" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28338" i_stop="28416" i_length="79">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.750" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28417" g_stop="28554" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="373" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28555" i_stop="29006" i_length="452">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.922" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29007" g_stop="29156" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="522" r_length="149" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E726097" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>523</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E726097" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26421" e_stop="26514"/>
          <exon e_start="28197" e_stop="28337"/>
          <exon e_start="28417" e_stop="28554"/>
          <exon e_start="29007" e_stop="29156"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACAATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCTGTAAGTTCTTCTTTATTTAAATTCCGCAACTATGAAAATGGTAAGGAAAGAGTATGATTGTAGCTTCTCTTGTTCACTGATGACATGACAGTGTGAATAATTTTGATCAACTATGATTTAATCAGTTAAAAGTAATCTATTTATCTTATTTTTGAAATGACTAGTTTGGCTTTAGATGGTACTATAAAGTAGACCTCATTATTTTAGGTTACGCAGAGTGTTTACTTGATTGTCTAAACAAAATTTAGAAATAAATTTTGAACCTAAGCTAAACACAGAGTTAAAGGGTTTCATTTAATCATTAAATTTGTCCTCCGTTATAGTTCTTTTAAGGGAAAGCTCCGAATCAACCCATTTTATCCAAAAATGAAAAGATAAAACCACCCGCCCCTAATATAACCCGCATCCGACCAACTAACATGTAAAACCCACCCAAGTCCAAAGAAAGCAAAACTAACCCTTTAACGGCGGCGGCGGCGGCAGCGACGGCGCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTATTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAGGTGACATAGTACTTTGCTGGGTTTTGAGGAAACTGGAACAGTATTTGTTTTTTAATCATAATGTTGAGTTTATTTAATTTGGTTCGGATTTTAATTTGATGGGTTTGCGGTCGGATTCATTCTAACCAATAAAAGAATGTTGATGGTTATTTTATCTCCAATAACTATATTGCAAGTACTTGTAAACCAAAAATACATTCACAGATTATAATTAAAGTAGTCTTTTTCTAATCAGAAGAATTATTTTCACCCGTGTTTTCTTTCTTTGGTATCTTGATGATTGAACAAGCTAACTGTGTCTTGATATTACCCCACTTGATTTGTTTGATATTTTAACTGATTTTCTTGAGAAAGGAGCTAGCTAATTATAGGTTCTGCAATTTCAATCTACAGTTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAGGTTGACCTAAAGTCTTTTCATTTATATGTTATTTCTTCTATAAATCTCAAGTGTAATATGGAGAATTCTACGTCTTCAGGGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTAT</genome_strand>
        <mrna_strand>GAACAATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG...............................................................................GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCA-ATACTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E256721" ref_strand="+" ref_description="SGN-E256721 [cLEG-40-D22]">
      <seq>aattttgaatgctctctctttatgtaaacattatgctttgtatgaaataaaggtcctctaagatttctgtaagcaactttgaaaatttctttaggtactccaactactggagaaagggtatcagaaggttttgtagcagtgccgtggtgcatgaagagccaatcactccacctgttgaggttaaatataatcagcttctcattaatggacagtttgttgatgcagcctcagggaagacatttcctacatttgaccctcgaacaggcgaagctattactacggttgcggaggccgacactgaagatgtcaaccgtgcagtctttgctgcccgtaaagcatttgatgaaggaccatggcctaaaatgacttgtgcagtaaccgaactttcttatctttccatatcctcttccttgtcccaacagtgagaggcggatttagaatttgaacttaacatgttcaacctttaaggttcttatcgctgaacacattgatctatcggacatacgtgtttagattttaatattctctcattttagtactttcacatatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="26125" stop="29036"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26425" g_stop="26514" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="90" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26515" i_stop="28196" i_length="1682">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.901" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28197" g_stop="28337" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="231" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28338" i_stop="28416" i_length="79">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.750" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28417" g_stop="28736" g_length="320"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="551" r_length="320" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E256721" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E256721" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26425" e_stop="26514"/>
          <exon e_start="28197" e_stop="28337"/>
          <exon e_start="28417" e_stop="28736"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCTGTAAGTTCTTCTTTATTTAAATTCCGCAACTATGAAAATGGTAAGGAAAGAGTATGATTGTAGCTTCTCTTGTTCACTGATGACATGACAGTGTGAATAATTTTGATCAACTATGATTTAATCAGTTAAAAGTAATCTATTTATCTTATTTTTGAAATGACTAGTTTGGCTTTAGATGGTACTATAAAGTAGACCTCATTATTTTAGGTTACGCAGAGTGTTTACTTGATTGTCTAAACAAAATTTAGAAATAAATTTTGAACCTAAGCTAAACACAGAGTTAAAGGGTTTCATTTAATCATTAAATTTGTCCTCCGTTATAGTTCTTTTAAGGGAAAGCTCCGAATCAACCCATTTTATCCAAAAATGAAAAGATAAAACCACCCGCCCCTAATATAACCCGCATCCGACCAACTAACATGTAAAACCCACCCAAGTCCAAAGAAAGCAAAACTAACCCTTTAACGGCGGCGGCGGCGGCAGCGACGGCGCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTATTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAGGTGACATAGTACTTTGCTGGGTTTTGAGGAAACTGGAACAGTATTTGTTTTTTAATCATAATGTTGAGTTTATTTAATTTGGTTCGGATTTTAATTTGATGGGTTTGCGGTCGGATTCATTCTAACCAATAAAAGAATGTTGATGGTTATTTTATCTCCAATAACTATATTGCAAGTACTTGTAAACCAAAAATACATTCACAGATTATAATTAAAGTAGTCTTTTTCTAATCAGAAGAATTATTTTCACCCGTGTTTTCTTTCTTTGGTATCTTGATGATTGAACAAGCTAACTGTGTCTTGATATTACCCCACTTGATTTGTTTGATATTTTAACTGATTTTCTTGAGAAAGGAGCTAGCTAATTATAGGTTCTGCAATTTCAATCTACAGTTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAGGTTGACCTAAAGTCTTTTCATTTATATGTTATTTCTTCTATAAATCTCAAGTGTAATATGGAGAATTCTACGTCTTCAGGGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATAT</genome_strand>
        <mrna_strand>AATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG...............................................................................GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E271992" ref_strand="+" ref_description="SGN-E271992 [cLEM-8-K22]">
      <seq>attttgaatgctctctctttatgtaaacattatgctttgtgtgaaataaaggtcctctaagatttctgtaagcaactttgaaaatttctttaggtactccaactactggagaaagggtatcataaggttttgtagcagtgccgtggtgcatgaagagccaatcactccacctgttgaggttaaatataatcaacttctcattaatggacagtttgttgatgcatcctcaaggaagacatttcctacatttgaccctcgaacaggcgaagctattactacggttgcggaggccgacactgaatatgtcaaccgtgcagtctttgctgcccgtaaagcatttgatgaaagaccatggcctaaaatgacttgtgcagtaaccgaactttcttatctttccatatcctcttccttgtcccaacagtgagaggcggatttagaatttgaacttaacatgttcaacctttaaagttcttatcgctgaacacattgatctatctgacatacgtgtttagattttaatattctctcattttagtactttcacatatatatttatttcctgtattata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="26126" stop="29055"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26426" g_stop="26514" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26515" i_stop="28196" i_length="1682">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.901" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28197" g_stop="28337" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="230" r_length="141" r_score="0.972"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28338" i_stop="28416" i_length="79">
            <donor d_prob="0.986" d_score="0.94"/>
            <acceptor a_prob="0.750" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28417" g_stop="28755" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="569" r_length="339" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E271992" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E271992" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26426" e_stop="26514"/>
          <exon e_start="28197" e_stop="28337"/>
          <exon e_start="28417" e_stop="28755"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCTGTAAGTTCTTCTTTATTTAAATTCCGCAACTATGAAAATGGTAAGGAAAGAGTATGATTGTAGCTTCTCTTGTTCACTGATGACATGACAGTGTGAATAATTTTGATCAACTATGATTTAATCAGTTAAAAGTAATCTATTTATCTTATTTTTGAAATGACTAGTTTGGCTTTAGATGGTACTATAAAGTAGACCTCATTATTTTAGGTTACGCAGAGTGTTTACTTGATTGTCTAAACAAAATTTAGAAATAAATTTTGAACCTAAGCTAAACACAGAGTTAAAGGGTTTCATTTAATCATTAAATTTGTCCTCCGTTATAGTTCTTTTAAGGGAAAGCTCCGAATCAACCCATTTTATCCAAAAATGAAAAGATAAAACCACCCGCCCCTAATATAACCCGCATCCGACCAACTAACATGTAAAACCCACCCAAGTCCAAAGAAAGCAAAACTAACCCTTTAACGGCGGCGGCGGCGGCAGCGACGGCGCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTATTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAGGTGACATAGTACTTTGCTGGGTTTTGAGGAAACTGGAACAGTATTTGTTTTTTAATCATAATGTTGAGTTTATTTAATTTGGTTCGGATTTTAATTTGATGGGTTTGCGGTCGGATTCATTCTAACCAATAAAAGAATGTTGATGGTTATTTTATCTCCAATAACTATATTGCAAGTACTTGTAAACCAAAAATACATTCACAGATTATAATTAAAGTAGTCTTTTTCTAATCAGAAGAATTATTTTCACCCGTGTTTTCTTTCTTTGGTATCTTGATGATTGAACAAGCTAACTGTGTCTTGATATTACCCCACTTGATTTGTTTGATATTTTAACTGATTTTCTTGAGAAAGGAGCTAGCTAATTATAGGTTCTGCAATTTCAATCTACAGTTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAGGTTGACCTAAAGTCTTTTCATTTATATGTTATTTCTTCTATAAATCTCAAGTGTAATATGGAGAATTCTACGTCTTCAGGGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATA</genome_strand>
        <mrna_strand>ATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTGTGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTACTCCAACTACTGGAGAAAGGGTATCATAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAACTTCTCATTAATGGACAGTTTGTTGATGCATCCTCAA...............................................................................GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAATATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAAGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAAGTTCTTATCGCTGAACACATTGATCTATCTGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E258160" ref_strand="+" ref_description="SGN-E258160 [cLEG-49-K13]">
      <seq>ttttgaatgctctctctttatgtaaacattatgctttgtatgaaataaaggtcctctaagatttctgtaagcaactttgaaaatttctttaggtactccaactactggagaaagggtatcagaaggttttgtagcagtgccgtggtgcatgaaaagccaatcactccacctgttgagggtaaatataatcagcttctcattaatggacagtttgttgatgcaggctcagggaaagactttcctacatttggacctcgaacacgcgaagctattactacggttgcggaggccgacactgaagatgtcaaccgtgcagtctttgctgcccgtaaagcatttgatgaacgaccatggcctaaaatgacttgtgcagtaaccgaactttcttatctttccatatcctcttccttgtccccaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="26127" stop="28906"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26427" g_stop="26514" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26515" i_stop="28196" i_length="1682">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.901" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28197" g_stop="28337" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="229" r_length="141" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28338" i_stop="28416" i_length="79">
            <donor d_prob="0.986" d_score="0.98"/>
            <acceptor a_prob="0.750" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28417" g_stop="28606" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="419" r_length="190" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E258160" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>419</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E258160" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26427" e_stop="26514"/>
          <exon e_start="28197" e_stop="28337"/>
          <exon e_start="28417" e_stop="28606"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCTGTAAGTTCTTCTTTATTTAAATTCCGCAACTATGAAAATGGTAAGGAAAGAGTATGATTGTAGCTTCTCTTGTTCACTGATGACATGACAGTGTGAATAATTTTGATCAACTATGATTTAATCAGTTAAAAGTAATCTATTTATCTTATTTTTGAAATGACTAGTTTGGCTTTAGATGGTACTATAAAGTAGACCTCATTATTTTAGGTTACGCAGAGTGTTTACTTGATTGTCTAAACAAAATTTAGAAATAAATTTTGAACCTAAGCTAAACACAGAGTTAAAGGGTTTCATTTAATCATTAAATTTGTCCTCCGTTATAGTTCTTTTAAGGGAAAGCTCCGAATCAACCCATTTTATCCAAAAATGAAAAGATAAAACCACCCGCCCCTAATATAACCCGCATCCGACCAACTAACATGTAAAACCCACCCAAGTCCAAAGAAAGCAAAACTAACCCTTTAACGGCGGCGGCGGCGGCAGCGACGGCGCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTATTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAGGTGACATAGTACTTTGCTGGGTTTTGAGGAAACTGGAACAGTATTTGTTTTTTAATCATAATGTTGAGTTTATTTAATTTGGTTCGGATTTTAATTTGATGGGTTTGCGGTCGGATTCATTCTAACCAATAAAAGAATGTTGATGGTTATTTTATCTCCAATAACTATATTGCAAGTACTTGTAAACCAAAAATACATTCACAGATTATAATTAAAGTAGTCTTTTTCTAATCAGAAGAATTATTTTCACCCGTGTTTTCTTTCTTTGGTATCTTGATGATTGAACAAGCTAACTGTGTCTTGATATTACCCCACTTGATTTGTTTGATATTTTAACTGATTTTCTTGAGAAAGGAGCTAGCTAATTATAGGTTCTGCAATTTCAATCTACAGTTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAGGTTGACCTAAAGTCTTTTCATTTATATGTTATTTCTTCTATAAATCTCAAGTGTAATATGGAGAATTCTACGTCTTCAGGG-AAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACA</genome_strand>
        <mrna_strand>TTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAAAGCCAATCACTCCACCTGTTGAGGGTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGGCTCAG...............................................................................GGAAAGAC-TTTCCTACATTTGGACCTCGAACACGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAACGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E217486" ref_strand="-" ref_description="SGN-E217486 [cLEL-21-F2](-)">
      <seq>tttggaatgctctctctttatgtgaacattatgctttgtatgaaataaaggtcctctaagatttctgtaagcaactttgaaaatttctttaggaactccaactactggagaaagggtatcagaaggttttgtagcaatgccgtggtgcatgaagagccaatcactccacctgttgaggttaaatataatcagcttctcattaatggacagtttgttgatgcagcctcagggaagacatttcctacatttgaccctcgaacaggcgaagctattactacggttgcggaggccgacactgaatatgtaaaccgtgcagtctttgctgcccgtaaagcatttgatgaaggaccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="26127" stop="28839"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26427" g_stop="26514" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26515" i_stop="28196" i_length="1682">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.901" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28197" g_stop="28337" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="229" r_length="141" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28338" i_stop="28416" i_length="79">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.750" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28417" g_stop="28539" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="352" r_length="123" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E217486" ref_strand="-">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>352</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E217486" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="26427" e_stop="26514"/>
          <exon e_start="28197" e_stop="28337"/>
          <exon e_start="28417" e_stop="28539"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCTGTAAGTTCTTCTTTATTTAAATTCCGCAACTATGAAAATGGTAAGGAAAGAGTATGATTGTAGCTTCTCTTGTTCACTGATGACATGACAGTGTGAATAATTTTGATCAACTATGATTTAATCAGTTAAAAGTAATCTATTTATCTTATTTTTGAAATGACTAGTTTGGCTTTAGATGGTACTATAAAGTAGACCTCATTATTTTAGGTTACGCAGAGTGTTTACTTGATTGTCTAAACAAAATTTAGAAATAAATTTTGAACCTAAGCTAAACACAGAGTTAAAGGGTTTCATTTAATCATTAAATTTGTCCTCCGTTATAGTTCTTTTAAGGGAAAGCTCCGAATCAACCCATTTTATCCAAAAATGAAAAGATAAAACCACCCGCCCCTAATATAACCCGCATCCGACCAACTAACATGTAAAACCCACCCAAGTCCAAAGAAAGCAAAACTAACCCTTTAACGGCGGCGGCGGCGGCAGCGACGGCGCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTATTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAGGTGACATAGTACTTTGCTGGGTTTTGAGGAAACTGGAACAGTATTTGTTTTTTAATCATAATGTTGAGTTTATTTAATTTGGTTCGGATTTTAATTTGATGGGTTTGCGGTCGGATTCATTCTAACCAATAAAAGAATGTTGATGGTTATTTTATCTCCAATAACTATATTGCAAGTACTTGTAAACCAAAAATACATTCACAGATTATAATTAAAGTAGTCTTTTTCTAATCAGAAGAATTATTTTCACCCGTGTTTTCTTTCTTTGGTATCTTGATGATTGAACAAGCTAACTGTGTCTTGATATTACCCCACTTGATTTGTTTGATATTTTAACTGATTTTCTTGAGAAAGGAGCTAGCTAATTATAGGTTCTGCAATTTCAATCTACAGTTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAGGTTGACCTAAAGTCTTTTCATTTATATGTTATTTCTTCTATAAATCTCAAGTGTAATATGGAGAATTCTACGTCTTCAGGGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCAT</genome_strand>
        <mrna_strand>TTTGGAATGCTCTCTCTTTATGTGAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGAACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAATGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG...............................................................................GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAATATGTAAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E542979" ref_strand="+" ref_description="SGN-E542979 [TUS-64-I23]">
      <seq>acattatgctttgtatgaaataaaggtcctctaagatttctgtaagcaactttgaaaatttctttaggtactccaactactggagaaagggtatcagaaggttttgtagcagtgccgtggtgcatgaagagccaatcactccacctgttgaggttaaatataatcagcttctcattaatggacagtttgttgatgcagcctcagggaagacatttcctacatttgaccctcgaacaggcgaagctattactacggttgcggaggccgacactgaagatgtcaaccgtgcagtctttgctgcccgtaaagcatttgatgaaggaccatggcctaaaatgacttgtgcagaaaggtcatgtataatgttgcagtttgctgatttgcttgagaggcacagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttgggctgataaaattcatggtcttacagctcctgctgacagtttgcaccatgttcagaccctgcatgagccaattggtgttgcaggacagataataccctggaattttccgttattaatgttcgcctggaaagttggccctgcacttgcttgtggtaacactgtcgtactaaaaccagcagaacaaacaccactctctgccctgtatgtgtcaaagttattccatgaggttggacttccccctggagtcttaaatgtcattcctggatccggtagtgcaggtgcagatcttgccagtcatatggatgtcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="26152" stop="30131"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26452" g_stop="26514" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26515" i_stop="28196" i_length="1682">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.901" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28197" g_stop="28337" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="204" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28338" i_stop="28416" i_length="79">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.750" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28417" g_stop="28559" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="347" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28560" i_stop="29006" i_length="447">
            <donor d_prob="0.793" d_score="1.00"/>
            <acceptor a_prob="0.922" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29007" g_stop="29160" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="501" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="29161" i_stop="29300" i_length="140">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="29301" g_stop="29530" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="502" r_stop="731" r_length="230" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="29531" i_stop="29749" i_length="219">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="29750" g_stop="29831" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="732" r_stop="813" r_length="82" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E542979" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>813</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E542979" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26452" e_stop="26514"/>
          <exon e_start="28197" e_stop="28337"/>
          <exon e_start="28417" e_stop="28559"/>
          <exon e_start="29007" e_stop="29160"/>
          <exon e_start="29301" e_stop="29530"/>
          <exon e_start="29750" e_stop="29831"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCTGTAAGTTCTTCTTTATTTAAATTCCGCAACTATGAAAATGGTAAGGAAAGAGTATGATTGTAGCTTCTCTTGTTCACTGATGACATGACAGTGTGAATAATTTTGATCAACTATGATTTAATCAGTTAAAAGTAATCTATTTATCTTATTTTTGAAATGACTAGTTTGGCTTTAGATGGTACTATAAAGTAGACCTCATTATTTTAGGTTACGCAGAGTGTTTACTTGATTGTCTAAACAAAATTTAGAAATAAATTTTGAACCTAAGCTAAACACAGAGTTAAAGGGTTTCATTTAATCATTAAATTTGTCCTCCGTTATAGTTCTTTTAAGGGAAAGCTCCGAATCAACCCATTTTATCCAAAAATGAAAAGATAAAACCACCCGCCCCTAATATAACCCGCATCCGACCAACTAACATGTAAAACCCACCCAAGTCCAAAGAAAGCAAAACTAACCCTTTAACGGCGGCGGCGGCGGCAGCGACGGCGCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTATTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAGGTGACATAGTACTTTGCTGGGTTTTGAGGAAACTGGAACAGTATTTGTTTTTTAATCATAATGTTGAGTTTATTTAATTTGGTTCGGATTTTAATTTGATGGGTTTGCGGTCGGATTCATTCTAACCAATAAAAGAATGTTGATGGTTATTTTATCTCCAATAACTATATTGCAAGTACTTGTAAACCAAAAATACATTCACAGATTATAATTAAAGTAGTCTTTTTCTAATCAGAAGAATTATTTTCACCCGTGTTTTCTTTCTTTGGTATCTTGATGATTGAACAAGCTAACTGTGTCTTGATATTACCCCACTTGATTTGTTTGATATTTTAACTGATTTTCTTGAGAAAGGAGCTAGCTAATTATAGGTTCTGCAATTTCAATCTACAGTTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAGGTTGACCTAAAGTCTTTTCATTTATATGTTATTTCTTCTATAAATCTCAAGTGTAATATGGAGAATTCTACGTCTTCAGGGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAGGTATATAACCATTTTTAGTCTGCACCGGTCGTGAATTCACAGAATTCTAATGAGTACTCATTTGTACTTGTCATTTAGTTATTTCTAGTATGTTGTTTACAAATTTAGTAGTTTCAAATATAGAAGTGGAAACTTTCCACAATTATTGCAGCTCAAATCGAAGATTTCTCCATCTATACAAGATGATAGAATGTAATTTGTCTTCACTCCAACTGTCAGGTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCG</genome_strand>
        <mrna_strand>ACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG...............................................................................GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTG............................................................................................................................................GTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG...........................................................................................................................................................................................................................GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E302394" ref_strand="+" ref_description="SGN-E302394 [cLEW-27-D18]">
      <seq>cattatgctttgtatgaaataaaggtcctctaagatttctgtaagcaactttgaaaatttctttaggtactccaactactggagaaagggtatcagaaggttttgtagcagtgccgtggtgcatgaagagccaatcactccacctgttgaggttaaatataatcagcttctcattaatggacagtttgttgatgcagcctcagggaagacatttcctacatttgaccctcgaacaggcgaagctattactacggttgcggaggccgacactgaagatgtcaaccgtgcagtctttgctgcccgtaaagcatttgatgaaggaccatggcctaaaatgacttgtgcagaaaggtcatgtataatgttgcagtttgctgatttgcttgagaggcacagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttgggctgataaaattcatggtcttacagctcctgctgacagtttgcaccatgttcagaccctgcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="26153" stop="29669"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26453" g_stop="26514" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26515" i_stop="28196" i_length="1682">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.901" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28197" g_stop="28337" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="203" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28338" i_stop="28416" i_length="79">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.750" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28417" g_stop="28559" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="204" r_stop="346" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28560" i_stop="29006" i_length="447">
            <donor d_prob="0.793" d_score="1.00"/>
            <acceptor a_prob="0.922" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29007" g_stop="29160" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="500" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="29161" i_stop="29300" i_length="140">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="29301" g_stop="29369" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="501" r_stop="569" r_length="69" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E302394" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E302394" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26453" e_stop="26514"/>
          <exon e_start="28197" e_stop="28337"/>
          <exon e_start="28417" e_stop="28559"/>
          <exon e_start="29007" e_stop="29160"/>
          <exon e_start="29301" e_stop="29369"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCTGTAAGTTCTTCTTTATTTAAATTCCGCAACTATGAAAATGGTAAGGAAAGAGTATGATTGTAGCTTCTCTTGTTCACTGATGACATGACAGTGTGAATAATTTTGATCAACTATGATTTAATCAGTTAAAAGTAATCTATTTATCTTATTTTTGAAATGACTAGTTTGGCTTTAGATGGTACTATAAAGTAGACCTCATTATTTTAGGTTACGCAGAGTGTTTACTTGATTGTCTAAACAAAATTTAGAAATAAATTTTGAACCTAAGCTAAACACAGAGTTAAAGGGTTTCATTTAATCATTAAATTTGTCCTCCGTTATAGTTCTTTTAAGGGAAAGCTCCGAATCAACCCATTTTATCCAAAAATGAAAAGATAAAACCACCCGCCCCTAATATAACCCGCATCCGACCAACTAACATGTAAAACCCACCCAAGTCCAAAGAAAGCAAAACTAACCCTTTAACGGCGGCGGCGGCGGCAGCGACGGCGCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTATTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAGGTGACATAGTACTTTGCTGGGTTTTGAGGAAACTGGAACAGTATTTGTTTTTTAATCATAATGTTGAGTTTATTTAATTTGGTTCGGATTTTAATTTGATGGGTTTGCGGTCGGATTCATTCTAACCAATAAAAGAATGTTGATGGTTATTTTATCTCCAATAACTATATTGCAAGTACTTGTAAACCAAAAATACATTCACAGATTATAATTAAAGTAGTCTTTTTCTAATCAGAAGAATTATTTTCACCCGTGTTTTCTTTCTTTGGTATCTTGATGATTGAACAAGCTAACTGTGTCTTGATATTACCCCACTTGATTTGTTTGATATTTTAACTGATTTTCTTGAGAAAGGAGCTAGCTAATTATAGGTTCTGCAATTTCAATCTACAGTTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAGGTTGACCTAAAGTCTTTTCATTTATATGTTATTTCTTCTATAAATCTCAAGTGTAATATGGAGAATTCTACGTCTTCAGGGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATG</genome_strand>
        <mrna_strand>CATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG...............................................................................GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTG............................................................................................................................................GTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E371149" ref_strand="+" ref_description="SGN-E371149 [TUS-28-L13]">
      <seq>aaaggtcctctaagatttctgtaagcaactttgaaaatttctttaggtactccaactactggagaaagggtatcagaaggttttgtagcagtgccgtggtgcatgaagagccaatcactccacctgttgaggttaaatataatcagcttctcattaatggacagtttgttgatgcagcctcagggaagacatttcctacatttgaccctcgaacaggcgaagctattactacggttgcggaggccgacactgaagatgtcaaccgtgcagtctttgctgcccgtaaagcatttgatgaaggaccatggcctaaaatgacttgtgcagaaaggtcatgtataatgttgcagtttgctgatttgcttgagaggcacagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttaagaaaataagaaaaatggcgttatgtttccttttgacagtttaataaccacttattgtatatcaattgacgttctaatgtttgctgaatcaccctaaatgcttttctaagtatttctgcttacatttcttattcaggttgggctgataaaattcatggtcttacagctcctgctgacagtttgcaccatgttcagaccctgcatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="26173" stop="29670"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26473" g_stop="26514" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="42" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26515" i_stop="28196" i_length="1682">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.901" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28197" g_stop="28337" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="183" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28338" i_stop="28416" i_length="79">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.750" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28417" g_stop="28559" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="326" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28560" i_stop="29006" i_length="447">
            <donor d_prob="0.793" d_score="1.00"/>
            <acceptor a_prob="0.922" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29007" g_stop="29370" g_length="364"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="690" r_length="364" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E371149" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>690</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E371149" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26473" e_stop="26514"/>
          <exon e_start="28197" e_stop="28337"/>
          <exon e_start="28417" e_stop="28559"/>
          <exon e_start="29007" e_stop="29370"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCTGTAAGTTCTTCTTTATTTAAATTCCGCAACTATGAAAATGGTAAGGAAAGAGTATGATTGTAGCTTCTCTTGTTCACTGATGACATGACAGTGTGAATAATTTTGATCAACTATGATTTAATCAGTTAAAAGTAATCTATTTATCTTATTTTTGAAATGACTAGTTTGGCTTTAGATGGTACTATAAAGTAGACCTCATTATTTTAGGTTACGCAGAGTGTTTACTTGATTGTCTAAACAAAATTTAGAAATAAATTTTGAACCTAAGCTAAACACAGAGTTAAAGGGTTTCATTTAATCATTAAATTTGTCCTCCGTTATAGTTCTTTTAAGGGAAAGCTCCGAATCAACCCATTTTATCCAAAAATGAAAAGATAAAACCACCCGCCCCTAATATAACCCGCATCCGACCAACTAACATGTAAAACCCACCCAAGTCCAAAGAAAGCAAAACTAACCCTTTAACGGCGGCGGCGGCGGCAGCGACGGCGCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTATTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAGGTGACATAGTACTTTGCTGGGTTTTGAGGAAACTGGAACAGTATTTGTTTTTTAATCATAATGTTGAGTTTATTTAATTTGGTTCGGATTTTAATTTGATGGGTTTGCGGTCGGATTCATTCTAACCAATAAAAGAATGTTGATGGTTATTTTATCTCCAATAACTATATTGCAAGTACTTGTAAACCAAAAATACATTCACAGATTATAATTAAAGTAGTCTTTTTCTAATCAGAAGAATTATTTTCACCCGTGTTTTCTTTCTTTGGTATCTTGATGATTGAACAAGCTAACTGTGTCTTGATATTACCCCACTTGATTTGTTTGATATTTTAACTGATTTTCTTGAGAAAGGAGCTAGCTAATTATAGGTTCTGCAATTTCAATCTACAGTTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAGGTTGACCTAAAGTCTTTTCATTTATATGTTATTTCTTCTATAAATCTCAAGTGTAATATGGAGAATTCTACGTCTTCAGGGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGA</genome_strand>
        <mrna_strand>AAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG...............................................................................GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E271849" ref_strand="+" ref_description="SGN-E271849 [cLEM-8-F13]">
      <seq>aggtcctctaagatttctgtaagcaactgggaaaatttctttaggtactccaactactatggaaagggtatcagaaggttttgtatcactgccttggtgcatgaagagccaatcactccacctgttgaggttaaatataatcagcttctcattaatggacagtttgttgatgcagcctcagggaagacatttcctacatttgaccctcgaacaggcgaagctattactacggttgcggaggccgacactgaagatgtcaaccgtgcagtctttgctgcccgtaaagcatcctaacactgaccatggcctaaaatgacttgtgcagaaaggtcatgtataatgttgcagtttgctgatttgcttgagaggcacagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="26175" stop="29459"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26475" g_stop="26514" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="40" r_length="40" r_score="0.950"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26515" i_stop="28196" i_length="1682">
            <donor d_prob="0.000" d_score="0.95"/>
            <acceptor a_prob="0.901" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28197" g_stop="28337" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="181" r_length="141" r_score="0.957"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28338" i_stop="28416" i_length="79">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.750" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28417" g_stop="28559" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="324" r_length="143" r_score="0.951"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28560" i_stop="29006" i_length="447">
            <donor d_prob="0.793" d_score="0.86"/>
            <acceptor a_prob="0.922" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29007" g_stop="29159" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="477" r_length="153" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E271849" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E271849" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26475" e_stop="26514"/>
          <exon e_start="28197" e_stop="28337"/>
          <exon e_start="28417" e_stop="28559"/>
          <exon e_start="29007" e_stop="29159"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCTGTAAGTTCTTCTTTATTTAAATTCCGCAACTATGAAAATGGTAAGGAAAGAGTATGATTGTAGCTTCTCTTGTTCACTGATGACATGACAGTGTGAATAATTTTGATCAACTATGATTTAATCAGTTAAAAGTAATCTATTTATCTTATTTTTGAAATGACTAGTTTGGCTTTAGATGGTACTATAAAGTAGACCTCATTATTTTAGGTTACGCAGAGTGTTTACTTGATTGTCTAAACAAAATTTAGAAATAAATTTTGAACCTAAGCTAAACACAGAGTTAAAGGGTTTCATTTAATCATTAAATTTGTCCTCCGTTATAGTTCTTTTAAGGGAAAGCTCCGAATCAACCCATTTTATCCAAAAATGAAAAGATAAAACCACCCGCCCCTAATATAACCCGCATCCGACCAACTAACATGTAAAACCCACCCAAGTCCAAAGAAAGCAAAACTAACCCTTTAACGGCGGCGGCGGCGGCAGCGACGGCGCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTATTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAGGTGACATAGTACTTTGCTGGGTTTTGAGGAAACTGGAACAGTATTTGTTTTTTAATCATAATGTTGAGTTTATTTAATTTGGTTCGGATTTTAATTTGATGGGTTTGCGGTCGGATTCATTCTAACCAATAAAAGAATGTTGATGGTTATTTTATCTCCAATAACTATATTGCAAGTACTTGTAAACCAAAAATACATTCACAGATTATAATTAAAGTAGTCTTTTTCTAATCAGAAGAATTATTTTCACCCGTGTTTTCTTTCTTTGGTATCTTGATGATTGAACAAGCTAACTGTGTCTTGATATTACCCCACTTGATTTGTTTGATATTTTAACTGATTTTCTTGAGAAAGGAGCTAGCTAATTATAGGTTCTGCAATTTCAATCTACAGTTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAGGTTGACCTAAAGTCTTTTCATTTATATGTTATTTCTTCTATAAATCTCAAGTGTAATATGGAGAATTCTACGTCTTCAGGGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCT</genome_strand>
        <mrna_strand>AGGTCCTCTAAGATTTCTGTAAGCAACTGGGAAAATTTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTACTCCAACTACTATGGAAAGGGTATCAGAAGGTTTTGTATCACTGCCTTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG...............................................................................GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATCCTAACACTGACCATGGCCTAAAATGACTTGTGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E333396" ref_strand="+" ref_description="SGN-E333396 [cTOD-20-D23]">
      <seq>aacttttttccatgagttgatttccaagaaaatggaaataactttgcccgcattggatctaactaacaacttattgttctacccaagtccaagaaatcaaaaacaaacccatataatggtagcgtggcggcggcgcgtcttcttcaatggtttccaggagaaggggaaataactttacccacatccgacccaactaacaagtaaaccatctttcccgttatagttctacccaggtccaagaaggcaaatacaaacccctctgggcgtggcagcggcgcatcttcttccatgtcttccaagaaaagggaaaataactttgccttttcccatcttctacagttcccttaattttgcatttttttagaatctaactcaacagtccctttatggacttcatcacttctaaccaaacacaaatccaactaagaagagataaaactcaataaaatgaatagcgtcccagaggaaaatctcaacacctgagtagacataaaaaagaatcaacttagcagttaaataaaatatcacatcatcaacagcagaagttgccgcctgaatcgccacgaacccaaccacaaaagcagagacaaatttcccttgctgaaagaatcagcccaaatccactacattcttgtactgcaattccaattacacttgcctcgaaattgccgcaaatacagtaacttggtgacttttgangaagatggaaaaattgattcttttctat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="26707" stop="28033"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27007" g_stop="27733" g_length="727"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="727" r_length="727" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E333396" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>727</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E333396" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27007" e_stop="27733"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTAT</genome_strand>
        <mrna_strand>AACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGANGAAGATGGAAAAATTGATTCTTTTCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E246766" ref_strand="+" ref_description="SGN-E246766 [cLEF-45-H10]">
      <seq>taaatataatcagcttctcattaatggacagtttgttgatgcagcctcagggaagacatttcctacatttgaccctcgaacaggcgaagctattactacggttgcggaggccgacactgaagatgtcaaccgtgcagtctttgctgcccgtaaagcatttgatgaaggaccatggcctaaaatgacttgtgcagtaaccgaactttcttatctttccatatcctcttccttgtcccaacagtgagaggcggatttagaatttgaacttaacatgttcaacctttaaggaaaggtcatgtataatgttgcagtttgctgatttgcttgagaggcacagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttaagaaaataagaaaaatggcgttatgtttccttttgacagtttaataaccacttattgtatatcaattgacgttctaatgtttgctgaatcaccctaaatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="27988" stop="29566"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28288" g_stop="28337" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28338" i_stop="28416" i_length="79">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.750" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28417" g_stop="28653" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="287" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28654" i_stop="29006" i_length="353">
            <donor d_prob="0.177" d_score="1.00"/>
            <acceptor a_prob="0.922" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29007" g_stop="29266" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="547" r_length="260" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E246766" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E246766" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28288" e_stop="28337"/>
          <exon e_start="28417" e_stop="28653"/>
          <exon e_start="29007" e_stop="29266"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAGGTTGACCTAAAGTCTTTTCATTTATATGTTATTTCTTCTATAAATCTCAAGTGTAATATGGAGAATTCTACGTCTTCAGGGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCT</genome_strand>
        <mrna_strand>TAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG...............................................................................GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAG.................................................................................................................................................................................................................................................................................................................................................................GAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E336972" ref_strand="+" ref_description="SGN-E336972 [cTOE-5-D2]">
      <seq>acggttgcggaggccgacactgaagatgtcaaccgtgcagtctttgctgcccgtaaagcatttgatgaaggaccatggcctaaaatgacttgtgcagtaaccgaactttcttatctttccatatcctcttccttgtcccaacagtgagaggcggatttagaatttgaacttaacatgttcaacctttaaggttcttatcgctgaacacattgatctatcggacatacgtgtttagattttaatattctctcattttagtactttcacatatatatttatttcctgtattatatggtccctctaccgaagttaatttctcagttggtcgttcaactaatagtaattatttgagtaatataagtcactttctttgttgaagaaaattggaatcaagttgaaaaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="28164" stop="29168"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28464" g_stop="28868" g_length="405"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="405" r_length="405" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E336972" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>405</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E336972" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28464" e_stop="28868"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGA</genome_strand>
        <mrna_strand>ACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E324375" ref_strand="+" ref_description="SGN-E324375 [cTOC-6-H13]">
      <seq>gaccatggcctaaaatgggtggtgcagtaaccgaactttctggggtttccatatcctcttccttggcccaacagtgagaggcggatttagaatttgaacttaacatgttcaacctttaaggttcttatcgctgaacacattgatctatcggacatacgtgtttagattttaatattctctcattttagtactttcacatatatatttatttcctgtattatatggtccctctaccgaagttaatttctcagttggtcgttcaactaatagtaattatttgagtgatataagtcactttctttgttgaagaaaattggaatcaagttgaaaaatgacttcttgagataataactatttagcaaagtgaccatatgagaaatcaatccgcctctgcagacaactacagcttgtttaaactcccagtcttacttaagcatgtacaataatgtacttacttaaccaaatatttccaggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="28234" stop="29309"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28534" g_stop="29009" g_length="476"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="476" r_length="476" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E324375" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>476</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E324375" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28534" e_stop="29009"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAA</genome_strand>
        <mrna_strand>GACCATGGCCTAAAATGGGTGGTGCAGTAACCGAACTTTCTGGGGTTTCCATATCCTCTTCCTTGGCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTGATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E334199" ref_strand="+" ref_description="SGN-E334199 [cTOD-21-L15]">
      <seq>aggcggatttagaatttgaacttaacatgttcaacctttaaggttcttatcgctgaacacattgatctatcggacatacgtgtttagattttaatattctctcattttagtactttcacatatatatttatttcctgtattatatggtccctctaccgaagttaatttctcagttggtcgttcaactaatagtaattatttgagtaatataagtcactttctttgttgaagaaaattggaatcaagttgaaaaatgacttcttgagataataactatttagcaaagtgaccatatgagaaatcaatccgcctctgcagacaactacagcttgtttaaactcccagtcttacttaagcatgtacaataatgtacttacttaaccaaatatttccaggaaaggtcatgtataatgttgcagtttgctgatttgcttgagaggcacagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctgggttaagaaaataagaaaaatggcgttatgtttcccttttgacagtttaataaccacttattgtatnatcatttgacgttctaatggtttgctgaatcaccctaaatgcttttctaagtatttctgctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="28312" stop="29586"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28612" g_stop="29286" g_length="675"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="679" r_length="679" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E334199" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>675</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E334199" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28612" e_stop="29286"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCT-GGTTAAGAAAATAAGAAAAATGGCGTTATGTTT-CCTTTTGACAGTTTAATAACCACTTATTGTAT-ATCAATTGACGTTCTAAT-GTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTA</genome_strand>
        <mrna_strand>AGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCCTTTTGACAGTTTAATAACCACTTATTGTATNATCATTTGACGTTCTAATGGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E329876" ref_strand="+" ref_description="SGN-E329876 [cTOD-3-H18]">
      <seq>ggatttagaatttgaacttaacatgttcaacctttaaggttcttagcgctgaacacattgatctatcggacatacgtgtttagattttaatattctctcattttagtactttcacatatatatttatttcctgtattatatggtccctctaccgaagttaatttctcagttggtcgttcaactaatagtaattatttgagtaatataagtcactttctttgttgaagaaaattggaatcaagttgaaaaatgacttcttgagataataactatttagcaaagtgaccatatgagaaatcaatccgcctctgcagacaactacagcttgtttaaactcccagtcttacttaagcatgtacaataatgtacttacttaaccaaatatttccaggaaaggtcatgtataatgttgcagtttgctgatttgcttgagaggcacagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttaagaaaataagaaaaatggcgttatgtttccttttgacagtttaataaccacttattgtatatcaattgacgttctaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="28316" stop="29542"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28616" g_stop="29242" g_length="627"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="627" r_length="627" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E329876" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>627</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E329876" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28616" e_stop="29242"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAAT</genome_strand>
        <mrna_strand>GGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTAGCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E302285" ref_strand="+" ref_description="SGN-E302285 [cLEW-19-P1]">
      <seq>cgaagttaatttctcagttggtcgttcaactaatagtaattatttgagtaatataagtcactttctttgttgaagaaaattggaatcaagttgaaaaatgacttcttgagataataactatttagcaaagtgaccatatgagaaatcaatccgcctctgcagacaactacagcttgtttaaactcccagtcttacttaagcatgtacaataatgtacttacttaaccaaatatttccaggaaaggtcatgtataatgttgcagtttgctgatttgcttgagaggcacagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttaagaaaataagaaaaatggcgttatgtttccttttgacagtttaataaccacttattgtatatcaattgacgttctaatgtttgctgaatcaccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="28468" stop="29559"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28768" g_stop="29259" g_length="492"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="492" r_length="492" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E302285" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E302285" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28768" e_stop="29259"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCT</genome_strand>
        <mrna_strand>CGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E261296" ref_strand="+" ref_description="SGN-E261296 [cLEG-68-O17]">
      <seq>aatcaagctgaaaaatgacttcttgagataatagctatttagcaaagtgaccatatgagaaatcaatccgcctctgcagacaactacagcttgtttaaactcccagtcttacttaagcatgtacaataatgtacttacttaaccaaatatttccaggaaaggtcatgtataatgttgcagtttgctgatttgcttgagaggcacagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgatcaacctgcaaacgaagaaatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="28551" stop="29427"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28851" g_stop="29127" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="277" r_length="277" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E261296" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>277</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E261296" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28851" e_stop="29127"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATAC</genome_strand>
        <mrna_strand>AATCAAGCTGAAAAATGACTTCTTGAGATAATAGCTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGATCAACCTGCAAACGAAGAAATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E264189" ref_strand="+" ref_description="SGN-E264189 [cLEG-64-J18]">
      <seq>aaccaaatatttccaggaaaggtcatgtataatgttgcagtttgctgatttgcttgagaggcacagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttaagaaaataagaaaaatggcgttatgtttccttttgacagtttaataaccacttattgtatatcaattgacgttctaatgtttgctgaatcaccctaaatgcttttctaagtatttctgcttacatttcttattcaggttgggctgataaaattcatggtcttacagctcctgctgacagtttgcaccatgttcagaccctgcatgagccaattggtgttgcaggacagataataccctggaattttccgttattaatgttcgcctggaaagttggccctgcacttgcttgtggtaacactgtcgtactaaaaccagcagaacaaacaccactctctgccctgtatgtgtcaaagttattccatgaagttggacttccccctggagtcttaaatgtcattcctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="28691" stop="30087"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28991" g_stop="29530" g_length="540"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="540" r_length="540" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29531" i_stop="29749" i_length="219">
            <donor d_prob="0.959" d_score="0.98"/>
            <acceptor a_prob="0.980" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29750" g_stop="29787" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="541" r_stop="578" r_length="38" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E264189" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>578</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E264189" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28991" e_stop="29530"/>
          <exon e_start="29750" e_stop="29787"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAGGTATATAACCATTTTTAGTCTGCACCGGTCGTGAATTCACAGAATTCTAATGAGTACTCATTTGTACTTGTCATTTAGTTATTTCTAGTATGTTGTTTACAAATTTAGTAGTTTCAAATATAGAAGTGGAAACTTTCCACAATTATTGCAGCTCAAATCGAAGATTTCTCCATCTATACAAGATGATAGAATGTAATTTGTCTTCACTCCAACTGTCAGGTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGG</genome_strand>
        <mrna_strand>AACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAA...........................................................................................................................................................................................................................GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E245989" ref_strand="+" ref_description="SGN-E245989 [cLEF-54-E10]">
      <seq>aaaggtcatgtataatgttgcagtttgctgatttgcttgagaggcacgagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttaagaaaataagaaaaatggcgttgggctgataaaattcatggtcttacagctcctgctgacagtttgcaccatgttcagaccctgcatgagccaattggtgttgcaggacagataataccctggaattttccgttattaatgttcgcctggaaagttggccctgcacttgcttgtggtaacactgtcgtactaaaaccagcagaacaaacaccactctctgccctgtatgtgtcaaagttattccatgaggttggacttccccctggagtcttaaatgtcattcctggatccggtagtgcaggtgcagatcttgccagtcatatggatgtcgataagattgcttttacagggtccacagaaactggtaaagctgtcgtatgtgcagctgcaaagagcaacctaaaacctgtgacattggagctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="28708" stop="30866"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29008" g_stop="29183" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29184" i_stop="29300" i_length="117">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29301" g_stop="29530" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="407" r_length="230" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29531" i_stop="29749" i_length="219">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29750" g_stop="29836" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="494" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29837" i_stop="30479" i_length="643">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30480" g_stop="30566" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="495" r_stop="581" r_length="87" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E245989" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>580</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E245989" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29008" e_stop="29183"/>
          <exon e_start="29301" e_stop="29530"/>
          <exon e_start="29750" e_stop="29836"/>
          <exon e_start="30480" e_stop="30566"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCAC-AGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAGGTATATAACCATTTTTAGTCTGCACCGGTCGTGAATTCACAGAATTCTAATGAGTACTCATTTGTACTTGTCATTTAGTTATTTCTAGTATGTTGTTTACAAATTTAGTAGTTTCAAATATAGAAGTGGAAACTTTCCACAATTATTGCAGCTCAAATCGAAGATTTCTCCATCTATACAAGATGATAGAATGTAATTTGTCTTCACTCCAACTGTCAGGTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAGGTATTTTCTGAGTTTTGGCTTTAGTTCCTGAATAGGAATTTACAGAAGAAATGGCTTATGTTTCTTCTGATAAACCTACACGACAAAGTCCAAGGCAGTTTCAGTATCAAATTTGAAATGTTGGATTGTATAAAGGAGTGTCAGAACACGGTATTTCAGTTTCAACATATCTCTAGGTAGCAATGAAGCTATCCGTCGCTAATTCTACCCCCTCTTCCATCCCAAAGAAGATTAAAAGAAGTAAATAGCCTAATTATAGTGTCTCATTAGATAGTATAATCCACATGTAGAAAATGAAGAAAATCATATCTTTTTCTTCCAGCTTCCCCATTAAAAGTCAATAAACAACATAAAGAGGTTATGCATCCTGATGTCCTTTCAGCTTTTGTATTTCATGCTTGCTTTTATTGATGCAGCTGTGATGTGTAAAGTTTTCTGAGTGAATACTCTGGAATAGATGAGGGAGACTGAAGGAGCACTGACATCTTCTACTACTTGTTTTCGTATAGATTTAAACAGCTTGGTCCTCGACATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTC</genome_strand>
        <mrna_strand>AAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACGAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGC.....................................................................................................................GTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG...........................................................................................................................................................................................................................GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTATGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E248945" ref_strand="+" ref_description="SGN-E248945 [cLEF-49-D24]">
      <seq>aaaggtcatgtataatgttgcagtttgctgatttgcttgagaggcacagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttaagaaaataagaaaaatggcgttgggctgataaaattcatggtcttacagctcctgctgacagtttgcaccatgttcagaccctgcatgagccaattggtgttgcaggacagataataccctggaattttccgttattaatgttcgcctggaaagttggccctgcacttgcttgtggtaacactgtcgtactaaaaccagcagaacaaacaccactctctgccctgtatgtgtcaaagttattccatgaggttggacttccccctggagtcttaaatgtcattcctggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="28708" stop="30089"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29008" g_stop="29183" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="176" r_length="176" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29184" i_stop="29300" i_length="117">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29301" g_stop="29530" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="406" r_length="230" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29531" i_stop="29749" i_length="219">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29750" g_stop="29789" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="446" r_length="40" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E248945" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>446</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E248945" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29008" e_stop="29183"/>
          <exon e_start="29301" e_stop="29530"/>
          <exon e_start="29750" e_stop="29789"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAGGTATATAACCATTTTTAGTCTGCACCGGTCGTGAATTCACAGAATTCTAATGAGTACTCATTTGTACTTGTCATTTAGTTATTTCTAGTATGTTGTTTACAAATTTAGTAGTTTCAAATATAGAAGTGGAAACTTTCCACAATTATTGCAGCTCAAATCGAAGATTTCTCCATCTATACAAGATGATAGAATGTAATTTGTCTTCACTCCAACTGTCAGGTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGAT</genome_strand>
        <mrna_strand>AAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGC.....................................................................................................................GTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG...........................................................................................................................................................................................................................GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E370665" ref_strand="+" ref_description="SGN-E370665 [TUS-27-M20]">
      <seq>ttgcagtttgctgatttgcttgagaggcacagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttaagaaaataagaaaaatggcgttatgtttccttttgacagtttaataaccacttattgtatatcaattgacgttctaatgtttgctgaatcaccctaaatgcttttctaagtatttctgcttacatttcttattcaggttgggctgataaaattcatggtcttacagctcctgctgacagtttgcaccatgttcagaccctgcatgagccaattggtgttgcaggacagataataccctggaattttccgttattaatgttcgcctggaaagttggccctgcacttgcttgtggtaacactgtcgtactaaaaccagcagaacaaacaccactctctgccctgtatgtgtcaaagttattccatgaggttggacttccccctggagtcttaaatgtcattcctggatccggtagtgcaggtgcagatcttgccagtcatatggatgtcgataagattgcttttacagggtccacagaaactggtaaagctgtcgtaggtgcagctgcaaagagcaacctaaacctgtgacattnggagctcgaggaaaatctccttcatcatttgtgagatgcagacgttgataaagctgttgagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="28725" stop="30924"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29025" g_stop="29530" g_length="506"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="506" r_length="506" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29531" i_stop="29749" i_length="219">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29750" g_stop="29836" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="507" r_stop="593" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29837" i_stop="30479" i_length="643">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30480" g_stop="30624" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="594" r_stop="735" r_length="142" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E370665" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>738</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E370665" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29025" e_stop="29530"/>
          <exon e_start="29750" e_stop="29836"/>
          <exon e_start="30480" e_stop="30624"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAGGTATATAACCATTTTTAGTCTGCACCGGTCGTGAATTCACAGAATTCTAATGAGTACTCATTTGTACTTGTCATTTAGTTATTTCTAGTATGTTGTTTACAAATTTAGTAGTTTCAAATATAGAAGTGGAAACTTTCCACAATTATTGCAGCTCAAATCGAAGATTTCTCCATCTATACAAGATGATAGAATGTAATTTGTCTTCACTCCAACTGTCAGGTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAGGTATTTTCTGAGTTTTGGCTTTAGTTCCTGAATAGGAATTTACAGAAGAAATGGCTTATGTTTCTTCTGATAAACCTACACGACAAAGTCCAAGGCAGTTTCAGTATCAAATTTGAAATGTTGGATTGTATAAAGGAGTGTCAGAACACGGTATTTCAGTTTCAACATATCTCTAGGTAGCAATGAAGCTATCCGTCGCTAATTCTACCCCCTCTTCCATCCCAAAGAAGATTAAAAGAAGTAAATAGCCTAATTATAGTGTCTCATTAGATAGTATAATCCACATGTAGAAAATGAAGAAAATCATATCTTTTTCTTCCAGCTTCCCCATTAAAAGTCAATAAACAACATAAAGAGGTTATGCATCCTGATGTCCTTTCAGCTTTTGTATTTCATGCTTGCTTTTATTGATGCAGCTGTGATGTGTAAAGTTTTCTGAGTGAATACTCTGGAATAGATGAGGGAGACTGAAGGAGCACTGACATCTTCTACTACTTGTTTTCGTATAGATTTAAACAGCTTGGTCCTCGACATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATT-GGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGT</genome_strand>
        <mrna_strand>TTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG...........................................................................................................................................................................................................................GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCT-AAACCTGTGACATTNGGAGCTC-GAGGAAAATCTCC-TTCATCATTTGTG-AGATGCAGACGTTGATAAAGCTGTTGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E271439" ref_strand="+" ref_description="SGN-E271439 [cLEM-5-J13]">
      <seq>ttgcagtttgctgatttgcttgagaggcacagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttaagaaaataagaaaaatggcgttatgtttccttttgacagtttaataaccacttattgtatatcaattgacgttctaatgtttgctgaatcaccctaaatgcttttctaagtatttctgcttacatttcttattcaggttgggctgataaaattcatggtcttacagctcctgctgacagtttgcaccatgttcagaccctgcatgagccaattggtgttgcaggacagataataccctggaattttccgttattaatgttcgcctggaaagttggccctgcacttgcttgtggtaacactgtcgtactaaaaccagcagaacaaacaccactctctgccctgtatgtgtcaaagttattccatgaggttggacttccccctggagtcttaaatgtcattcctggatccggtagtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="28725" stop="30099"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29025" g_stop="29530" g_length="506"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="506" r_length="506" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29531" i_stop="29749" i_length="219">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29750" g_stop="29799" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="507" r_stop="556" r_length="50" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E271439" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E271439" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29025" e_stop="29530"/>
          <exon e_start="29750" e_stop="29799"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAGGTATATAACCATTTTTAGTCTGCACCGGTCGTGAATTCACAGAATTCTAATGAGTACTCATTTGTACTTGTCATTTAGTTATTTCTAGTATGTTGTTTACAAATTTAGTAGTTTCAAATATAGAAGTGGAAACTTTCCACAATTATTGCAGCTCAAATCGAAGATTTCTCCATCTATACAAGATGATAGAATGTAATTTGTCTTCACTCCAACTGTCAGGTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGC</genome_strand>
        <mrna_strand>TTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG...........................................................................................................................................................................................................................GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E249362" ref_strand="+" ref_description="SGN-E249362 [cLEF-50-K4]">
      <seq>acttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttaagaaaataagaaaaatggcgttatgtttccttttgacagtttaataaccacttattgtatatcaattgacgttctaatgtttgctgaatcaccctaaatgcttttctaagtatttctgcttacatttcttattcaggttgggctgataaaattcatggtcttacagctcctgctgacagtttgcaccatgttcagaccctgcatgagccaattggtgttgcaggacagataataccctggaattttccgttattaatgttcgcctggaaagttggccctgcacttgcttgtggtaacactgtcgtactaaaaccagcagaacaaacaccactctctgccctgtatgtgtcaaagttattccatgaggttggacttccccctggagtcttaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="28763" stop="30076"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29063" g_stop="29530" g_length="468"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="468" r_length="468" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29531" i_stop="29749" i_length="219">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29750" g_stop="29776" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="495" r_length="27" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E249362" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>495</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E249362" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29063" e_stop="29530"/>
          <exon e_start="29750" e_stop="29776"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAGGTATATAACCATTTTTAGTCTGCACCGGTCGTGAATTCACAGAATTCTAATGAGTACTCATTTGTACTTGTCATTTAGTTATTTCTAGTATGTTGTTTACAAATTTAGTAGTTTCAAATATAGAAGTGGAAACTTTCCACAATTATTGCAGCTCAAATCGAAGATTTCTCCATCTATACAAGATGATAGAATGTAATTTGTCTTCACTCCAACTGTCAGGTTGGACTTCCCCCTGGAGTCTTAAAT</genome_strand>
        <mrna_strand>ACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG...........................................................................................................................................................................................................................GTTGGACTTCCCCCTGGAGTCTTAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E314892" ref_strand="+" ref_description="SGN-E314892 [cTOA-31-M1]">
      <seq>tgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttaagaaaataagaaaaatggcgttatgtttccttttgacagtttaataaccacttattgtatatcaattgacgttctaatgtttgctgaatcaccctaaatgcttttctaagtatttctgcttacatttcttattcaggttgggctgataaaattcatggtcttacagctcctgctgacagtttgcaccatgttcagaccctgcatgagccaattggtgttgcaggacagataataccctggaattttccgttattaatgttcgcctggaaagttggccctgcacttgcttgtggtaacactgtcgtactaaaaccagcagaacaaacaccactctctgccctgtatgtgtcaaagttattccatgaggttggacttccccctggagtcttaaatgtcattcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="28775" stop="30085"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29075" g_stop="29530" g_length="456"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="456" r_length="456" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29531" i_stop="29749" i_length="219">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29750" g_stop="29785" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="492" r_length="36" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E314892" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E314892" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29075" e_stop="29530"/>
          <exon e_start="29750" e_stop="29785"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAGGTATATAACCATTTTTAGTCTGCACCGGTCGTGAATTCACAGAATTCTAATGAGTACTCATTTGTACTTGTCATTTAGTTATTTCTAGTATGTTGTTTACAAATTTAGTAGTTTCAAATATAGAAGTGGAAACTTTCCACAATTATTGCAGCTCAAATCGAAGATTTCTCCATCTATACAAGATGATAGAATGTAATTTGTCTTCACTCCAACTGTCAGGTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCT</genome_strand>
        <mrna_strand>TGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG...........................................................................................................................................................................................................................GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E314995" ref_strand="+" ref_description="SGN-E314995 [cTOA-31-M2]">
      <seq>tgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttaagaaaataagaaaaatggcgttatgtttccttttgacagtttaataaccacttattgtatatcaattgacgttctaatgtttgctgaatcaccctaaatgcttttctaagtatttctgcttacatttcttattcaggttgggctgataaaattcatggtcttacagctcctgctgacagtttgcaccatgttcagaccctgcatgagccaattggtgttgcaggacagataataccctggaattttccgttattaatgttcgcctggaaagttggccctgcacttgcttgtggtaacactgtcgtactaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="28775" stop="29776"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29075" g_stop="29476" g_length="402"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="402" r_length="402" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E314995" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>402</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E314995" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29075" e_stop="29476"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAA</genome_strand>
        <mrna_strand>TGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E277810" ref_strand="+" ref_description="SGN-E277810 [cLEL-5-M19](-)">
      <seq>agagagtggtgtttgttctgctggttttagtacgacangtgttaccacaagcaagtgcagggccaactttccaggcgaacattaataacggaaaattccagggtattatctgtcctgcaacaccaattggctcatgcagggtctgaacatggtgcaaactgtcagcaggagctgtaagaccatgaattttatcagcccaacctgaataagaaatgtaagcagaaatacttagaaaagcatttagggtgattcagcaaacattagaacgtcaattgatatacaataagtggttattaaactgtcaaaaggaaacataacgccattttctcgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="29800" stop="28872"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29500" g_stop="29168" g_length="333"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="333" r_length="333" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E277810" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>333</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E277810" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29500" e_stop="29168"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAGTGGTGTTTGTTCTGCTGGTTTTAGTACGACA-GTGTTACCACAAGCAAGTGCAGGGCCAACTTTCCAGGCGAACATTAATAACGGAAAATTCCAGGGTATTATCTGTCCTGCAACACCAATTGGCTCATGCAGGGTCTGAACATGGTGCAAACTGTCAGCAGGAGCTGTAAGACCATGAATTTTATCAGCCCAACCTGAATAAGAAATGTAAGCAGAAATACTTAGAAAAGCATTTAGGGTGATTCAGCAAACATTAGAACGTCAATTGATATACAATAAGTGGTTATTAAACTGTCAAAAGGAAACATAACGCCATTTTTCTTATTT</genome_strand>
        <mrna_strand>AGAGAGTGGTGTTTGTTCTGCTGGTTTTAGTACGACANGTGTTACCACAAGCAAGTGCAGGGCCAACTTTCCAGGCGAACATTAATAACGGAAAATTCCAGGGTATTATCTGTCCTGCAACACCAATTGGCTCATGCAGGGTCTGAACATGGTGCAAACTGTCAGCAGGAGCTGTAAGACCATGAATTTTATCAGCCCAACCTGAATAAGAAATGTAAGCAGAAATACTTAGAAAAGCATTTAGGGTGATTCAGCAAACATTAGAACGTCAATTGATATACAATAAGTGGTTATTAAACTGTCAAAAGGAAACATAACGCCA-TTTTCTCGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E257422" ref_strand="+" ref_description="SGN-E257422 [cLEG-45-M8]">
      <seq>aaaatggcgttatgtttccttttgacagtttaataaccacttattgtatatcaattgacgttctaatgtttgctgaatcaccctaaatgcttttctaagtatttctgcttacatttcttattcaaggtgggctgataaaattcatggtcttacagctcctgctgacagtttgcaccatgttcagaccctgcatgagccaattggtgttgccggacagataataacctggaaatttcccctattaatgttcgcctggaaagatggccctgcactttcttgtggtaacactgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="28876" stop="29766"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29176" g_stop="29466" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E257422" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>291</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E257422" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29176" e_stop="29466"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGT</genome_strand>
        <mrna_strand>AAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAAGGTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCCGGACAGATAATAACCTGGAAATTTCCCCTATTAATGTTCGCCTGGAAAGATGGCCCTGCACTTTCTTGTGGTAACACTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E249288" ref_strand="+" ref_description="SGN-E249288 [cLEF-50-L24]">
      <seq>caattggtgttgcaagacagataataccctggaattttccgttattaatgttcgcctggaaagttggccctgcacttgcttgtggtaacactgtcgtactaaaaccagcagaacaaacaccactctctgccctgtatgtgtcaaagttattccatgaagttggacttccccctggagtcttaaatgtcattcctggatccggtagtgcaggtgcagatcttgccagtcatatggatgtcgataagattgcttttacagggtccacagaaactggtaaagctgtcgtaggtgcagctgcaaagagcaacctaaaacctgtgacattggagctcggaggaaaatctcctttcatcatttgtgaagatgcagacgttgataaagctgttgagttggctcattctgctgttttctttaaccagggacaatgctgctgtgctggatctcggacattcgtacatgaaagagtatatgatgaatttgtggagaaagccaaagctcgtgctttaaaacgcattgttggagaccctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="29073" stop="31141"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29373" g_stop="29530" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="158" r_length="158" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29531" i_stop="29749" i_length="219">
            <donor d_prob="0.959" d_score="0.98"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29750" g_stop="29836" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="159" r_stop="245" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29837" i_stop="30479" i_length="643">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30480" g_stop="30653" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="419" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="30654" i_stop="30732" i_length="79">
            <donor d_prob="0.933" d_score="1.00"/>
            <acceptor a_prob="0.857" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30733" g_stop="30841" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="528" r_length="109" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E249288" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>528</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E249288" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29373" e_stop="29530"/>
          <exon e_start="29750" e_stop="29836"/>
          <exon e_start="30480" e_stop="30653"/>
          <exon e_start="30733" e_stop="30841"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAGGTATATAACCATTTTTAGTCTGCACCGGTCGTGAATTCACAGAATTCTAATGAGTACTCATTTGTACTTGTCATTTAGTTATTTCTAGTATGTTGTTTACAAATTTAGTAGTTTCAAATATAGAAGTGGAAACTTTCCACAATTATTGCAGCTCAAATCGAAGATTTCTCCATCTATACAAGATGATAGAATGTAATTTGTCTTCACTCCAACTGTCAGGTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAGGTATTTTCTGAGTTTTGGCTTTAGTTCCTGAATAGGAATTTACAGAAGAAATGGCTTATGTTTCTTCTGATAAACCTACACGACAAAGTCCAAGGCAGTTTCAGTATCAAATTTGAAATGTTGGATTGTATAAAGGAGTGTCAGAACACGGTATTTCAGTTTCAACATATCTCTAGGTAGCAATGAAGCTATCCGTCGCTAATTCTACCCCCTCTTCCATCCCAAAGAAGATTAAAAGAAGTAAATAGCCTAATTATAGTGTCTCATTAGATAGTATAATCCACATGTAGAAAATGAAGAAAATCATATCTTTTTCTTCCAGCTTCCCCATTAAAAGTCAATAAACAACATAAAGAGGTTATGCATCCTGATGTCCTTTCAGCTTTTGTATTTCATGCTTGCTTTTATTGATGCAGCTGTGATGTGTAAAGTTTTCTGAGTGAATACTCTGGAATAGATGAGGGAGACTGAAGGAGCACTGACATCTTCTACTACTTGTTTTCGTATAGATTTAAACAGCTTGGTCCTCGACATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAGGTAGCAAAAATTTCCACTCTTGGAAAATTGCAACCTCTGATGCTTGCTCCAGAATGGAATAAATTTCAAGTATCTGCAGGGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTT</genome_strand>
        <mrna_strand>CAATTGGTGTTGCAAGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAA...........................................................................................................................................................................................................................GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAG...............................................................................GGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E275091" ref_strand="+" ref_description="SGN-E275091 [cLEN-9-O9]">
      <seq>ttaatgttagcttggaaagttggccctgcacttgcttgtggtaacactgtcgtactaaaaccagcagaacaaacaccactctctgccctgtatgtgtcaaagttattccatgaggttggacttccccctggagtcttaaatgtcattcctggatccggtagtgcaggtgcagatcttgccagtcatatggatgtcgataagattgcttttacagggtccacagaaactggtaaagctgtcgtaggtgcagctgcaaagagcaacctaaaacctgtgacattggagctcggaggaaaatctcctttcatcatttgtgaagatgcagacgttgataaagctgttgagttggctcattctgctgttttctttaaccagggacaatgctgctgtgctggatctcggacattcgtacatgaaagagtatatgatgaatttgtggagaaagccaaagctcgtgctttaaaacgcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="29117" stop="31128"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29417" g_stop="29530" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29531" i_stop="29749" i_length="219">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29750" g_stop="29836" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="201" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29837" i_stop="30479" i_length="643">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30480" g_stop="30653" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="375" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="30654" i_stop="30732" i_length="79">
            <donor d_prob="0.933" d_score="1.00"/>
            <acceptor a_prob="0.857" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30733" g_stop="30828" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="471" r_length="96" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E275091" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>471</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E275091" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29417" e_stop="29530"/>
          <exon e_start="29750" e_stop="29836"/>
          <exon e_start="30480" e_stop="30653"/>
          <exon e_start="30733" e_stop="30828"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAGGTATATAACCATTTTTAGTCTGCACCGGTCGTGAATTCACAGAATTCTAATGAGTACTCATTTGTACTTGTCATTTAGTTATTTCTAGTATGTTGTTTACAAATTTAGTAGTTTCAAATATAGAAGTGGAAACTTTCCACAATTATTGCAGCTCAAATCGAAGATTTCTCCATCTATACAAGATGATAGAATGTAATTTGTCTTCACTCCAACTGTCAGGTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAGGTATTTTCTGAGTTTTGGCTTTAGTTCCTGAATAGGAATTTACAGAAGAAATGGCTTATGTTTCTTCTGATAAACCTACACGACAAAGTCCAAGGCAGTTTCAGTATCAAATTTGAAATGTTGGATTGTATAAAGGAGTGTCAGAACACGGTATTTCAGTTTCAACATATCTCTAGGTAGCAATGAAGCTATCCGTCGCTAATTCTACCCCCTCTTCCATCCCAAAGAAGATTAAAAGAAGTAAATAGCCTAATTATAGTGTCTCATTAGATAGTATAATCCACATGTAGAAAATGAAGAAAATCATATCTTTTTCTTCCAGCTTCCCCATTAAAAGTCAATAAACAACATAAAGAGGTTATGCATCCTGATGTCCTTTCAGCTTTTGTATTTCATGCTTGCTTTTATTGATGCAGCTGTGATGTGTAAAGTTTTCTGAGTGAATACTCTGGAATAGATGAGGGAGACTGAAGGAGCACTGACATCTTCTACTACTTGTTTTCGTATAGATTTAAACAGCTTGGTCCTCGACATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAGGTAGCAAAAATTTCCACTCTTGGAAAATTGCAACCTCTGATGCTTGCTCCAGAATGGAATAAATTTCAAGTATCTGCAGGGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATT</genome_strand>
        <mrna_strand>TTAATGTTAGCTTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG...........................................................................................................................................................................................................................GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAG...............................................................................GGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E261730" ref_strand="+" ref_description="SGN-E261730 [cLEG-61-P21]">
      <seq>atgaggttggacttccccctggagtcttaaatgtcattcctggatccggtagtgcaggtgcagatcttgccagtcatatggatgtcgataagattgcttttacagggtccacagaaactggtaaagctgtcgtaggtgcagctgcaaagagcaacctaaaacctgtgacattggagctcggaggaaaatctcctttcatcatttgtgaagatgcagacgttgataaagctgttgagttggctcattctgctgttttctttaaccagggacaatgctgctgtgctggatctcggacattcgtacatgaaagagtatatgatgaatttgtggagaaagccaaagctcgtgctttaaaacgcattgttggagaccctttcaagaagggagttgaacaaggtccgcagattgatacagagcaatttgagaagatcctgaagtacataaaatctggtactgaaagcggggctactctcgagtctggaggggaaaaattgggttccaagggcttctatgtccaacctactgtcttctcaaatgtccaggataacatgctgattgccagagatgagatatttggaccagtgcagtccctcttgaaattcaaggatgttgaagaggtcatccgaagggcaaactcgtcacattatgggttggcagcgggtgtttttacccagaatatagatgcagccaacacaatatctcgagcccttagagtnaggacagtgtgggttaactgctttaacatctttgatgctgcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="29446" stop="31993"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29526" g_stop="29530" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="5" r_length="5" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29531" i_stop="29749" i_length="219">
            <donor d_prob="0.959" d_score="0.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29750" g_stop="29836" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="6" r_stop="92" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29837" i_stop="30479" i_length="643">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30480" g_stop="30653" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="266" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="30654" i_stop="30732" i_length="79">
            <donor d_prob="0.933" d_score="1.00"/>
            <acceptor a_prob="0.857" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30733" g_stop="30870" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="404" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="30871" i_stop="31150" i_length="280">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="31151" g_stop="31288" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="542" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="31289" i_stop="31397" i_length="109">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="31398" g_stop="31459" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="543" r_stop="604" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="31460" i_stop="31538" i_length="79">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="31539" g_stop="31693" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="605" r_stop="759" r_length="155" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E261730" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>759</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E261730" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29526" e_stop="29530"/>
          <exon e_start="29750" e_stop="29836"/>
          <exon e_start="30480" e_stop="30653"/>
          <exon e_start="30733" e_stop="30870"/>
          <exon e_start="31151" e_stop="31288"/>
          <exon e_start="31398" e_stop="31459"/>
          <exon e_start="31539" e_stop="31693"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAGGTATATAACCATTTTTAGTCTGCACCGGTCGTGAATTCACAGAATTCTAATGAGTACTCATTTGTACTTGTCATTTAGTTATTTCTAGTATGTTGTTTACAAATTTAGTAGTTTCAAATATAGAAGTGGAAACTTTCCACAATTATTGCAGCTCAAATCGAAGATTTCTCCATCTATACAAGATGATAGAATGTAATTTGTCTTCACTCCAACTGTCAGGTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAGGTATTTTCTGAGTTTTGGCTTTAGTTCCTGAATAGGAATTTACAGAAGAAATGGCTTATGTTTCTTCTGATAAACCTACACGACAAAGTCCAAGGCAGTTTCAGTATCAAATTTGAAATGTTGGATTGTATAAAGGAGTGTCAGAACACGGTATTTCAGTTTCAACATATCTCTAGGTAGCAATGAAGCTATCCGTCGCTAATTCTACCCCCTCTTCCATCCCAAAGAAGATTAAAAGAAGTAAATAGCCTAATTATAGTGTCTCATTAGATAGTATAATCCACATGTAGAAAATGAAGAAAATCATATCTTTTTCTTCCAGCTTCCCCATTAAAAGTCAATAAACAACATAAAGAGGTTATGCATCCTGATGTCCTTTCAGCTTTTGTATTTCATGCTTGCTTTTATTGATGCAGCTGTGATGTGTAAAGTTTTCTGAGTGAATACTCTGGAATAGATGAGGGAGACTGAAGGAGCACTGACATCTTCTACTACTTGTTTTCGTATAGATTTAAACAGCTTGGTCCTCGACATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAGGTAGCAAAAATTTCCACTCTTGGAAAATTGCAACCTCTGATGCTTGCTCCAGAATGGAATAAATTTCAAGTATCTGCAGGGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAGGTACTGTTTTTTCGTGTATCGCTGTCCCCTCTGTCATGGATAATATATAAAAAGAGAATAGTTAAACAAATTCTTTGCCAACTTAAGGACAAGAAGGAATAATATATGTTCACCAATTTGGATGTAGCCAACTTTTCAGGCAATGGTACCTTTATTATTTCCTTTTCAGCATCTTACACAAACTTAAATCATGAATTTCCAGCAAAGAGAAGTAGTAATTACGGACTTCCATTTACATTTCTGAAGTAGTTGTAACATGAATGTTTTGTGTTATCAATAGATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAGGTATAACTGCCATTGTCCATAGAATATATCCATACGTAAGGTGAAAAAGATGAGCATCGTACTGATGACATTTAATTGTTTTGTTTAAAATTATTTTTCAACTATTTAGGATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAAGTGAGATTACATTTCATTTGTATTGTATCTGTGCTTGTATTTTGTTTATTAACACTGAACCTGACCTTGAAACAAACAGGGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCA</genome_strand>
        <mrna_strand>ATGAG...........................................................................................................................................................................................................................GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAG...............................................................................GGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAG........................................................................................................................................................................................................................................................................................ATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAG.............................................................................................................GATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAA...............................................................................GGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTNAGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E255543" ref_strand="+" ref_description="SGN-E255543 [cLEG-30-F8]">
      <seq>tgtcattcctggatccggtagtgcaggtgcagatcttgccagtcatatggatgtccataagattgcttttacagggtccacagaaactggtaaagctgtcgtaggtgcagctgcaaagagcaacctaaaacctgtgacattggagctcggaggaaaatctcctttcatcatttgtgaagatgcagacgttgataaagctgttgagttggctcattctgctgttttctttaaccagggacaatgctgctgtgctggatctcggacattcgtacatgaaagagtatatgatgaatttgtggagaaagccaaagctcgtgctttaaaacgcattgttggagaccctttcaagaagggagttgaacaacgtccgcagattgatacagagcaatttgagaagatcctgaagtacataaaatctggtactgaaagcggggctactctcgagtctggaggggaaaaattgggttccaagggcttctatgtccaacctactgtcttctcaaatgtccaagataacatgctgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="29476" stop="31598"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29776" g_stop="29836" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29837" i_stop="30479" i_length="643">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30480" g_stop="30653" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="235" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30654" i_stop="30732" i_length="79">
            <donor d_prob="0.933" d_score="1.00"/>
            <acceptor a_prob="0.857" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30733" g_stop="30870" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="373" r_length="138" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="30871" i_stop="31150" i_length="280">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31151" g_stop="31288" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="511" r_length="138" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31289" i_stop="31397" i_length="109">
            <donor d_prob="0.961" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="31398" g_stop="31411" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="512" r_stop="525" r_length="14" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E255543" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E255543" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29776" e_stop="29836"/>
          <exon e_start="30480" e_stop="30653"/>
          <exon e_start="30733" e_stop="30870"/>
          <exon e_start="31151" e_stop="31288"/>
          <exon e_start="31398" e_stop="31411"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAGGTATTTTCTGAGTTTTGGCTTTAGTTCCTGAATAGGAATTTACAGAAGAAATGGCTTATGTTTCTTCTGATAAACCTACACGACAAAGTCCAAGGCAGTTTCAGTATCAAATTTGAAATGTTGGATTGTATAAAGGAGTGTCAGAACACGGTATTTCAGTTTCAACATATCTCTAGGTAGCAATGAAGCTATCCGTCGCTAATTCTACCCCCTCTTCCATCCCAAAGAAGATTAAAAGAAGTAAATAGCCTAATTATAGTGTCTCATTAGATAGTATAATCCACATGTAGAAAATGAAGAAAATCATATCTTTTTCTTCCAGCTTCCCCATTAAAAGTCAATAAACAACATAAAGAGGTTATGCATCCTGATGTCCTTTCAGCTTTTGTATTTCATGCTTGCTTTTATTGATGCAGCTGTGATGTGTAAAGTTTTCTGAGTGAATACTCTGGAATAGATGAGGGAGACTGAAGGAGCACTGACATCTTCTACTACTTGTTTTCGTATAGATTTAAACAGCTTGGTCCTCGACATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAGGTAGCAAAAATTTCCACTCTTGGAAAATTGCAACCTCTGATGCTTGCTCCAGAATGGAATAAATTTCAAGTATCTGCAGGGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAGGTACTGTTTTTTCGTGTATCGCTGTCCCCTCTGTCATGGATAATATATAAAAAGAGAATAGTTAAACAAATTCTTTGCCAACTTAAGGACAAGAAGGAATAATATATGTTCACCAATTTGGATGTAGCCAACTTTTCAGGCAATGGTACCTTTATTATTTCCTTTTCAGCATCTTACACAAACTTAAATCATGAATTTCCAGCAAAGAGAAGTAGTAATTACGGACTTCCATTTACATTTCTGAAGTAGTTGTAACATGAATGTTTTGTGTTATCAATAGATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAGGTATAACTGCCATTGTCCATAGAATATATCCATACGTAAGGTGAAAAAGATGAGCATCGTACTGATGACATTTAATTGTTTTGTTTAAAATTATTTTTCAACTATTTAGGATAACATGCTGAT</genome_strand>
        <mrna_strand>TGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCCATAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAG...............................................................................GGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAACGTCCGCAG........................................................................................................................................................................................................................................................................................ATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAA.............................................................................................................GATAACATGCTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E211596" ref_strand="+" ref_description="SGN-E211596 [cLEC-67-E18]">
      <seq>ccaaggcagtttcagtatcaaatttgaaatgttggattgtataaaggagtgtcagaacacggtatttcagtttcaacatatctctaggtagcaatgaagctatccgtcgctaattctaccccctcttccatcccaaagaagattaaaagaagtaaatagcctaattatagtgtctcattagatagtataatccacatgtagaaaatgaagaaaatcatatctttttcttccagcttccccattaaaagtcaataaacaacataaagaggttatgcatcctgatgtcctttcagcttttgtatttcatgcttgcttttattgatgcagctgtgatgtgtaaagttttctgagtgaatactctggaatagatgagggagactgaaggagcactgacatcttctactacttgttttcgtatagatttaaacagcttggtcctcgacattacttgcatcttttccccctgtaaaatgtttttttttggtgattttttaatttttctgtgatgtctaaattgcgatgtgtctctacatcactccttttggtgtctacagattgcttttacagggtccacagaaactggtaaagctgtcgtaggtgcagctgcaaagagcaacctaaaacctgtgacattggagctcggaggaaaatctcctttcatcattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="29626" stop="30891"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29926" g_stop="30591" g_length="666"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="666" r_length="666" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E211596" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>666</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E211596" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29926" e_stop="30591"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAGGCAGTTTCAGTATCAAATTTGAAATGTTGGATTGTATAAAGGAGTGTCAGAACACGGTATTTCAGTTTCAACATATCTCTAGGTAGCAATGAAGCTATCCGTCGCTAATTCTACCCCCTCTTCCATCCCAAAGAAGATTAAAAGAAGTAAATAGCCTAATTATAGTGTCTCATTAGATAGTATAATCCACATGTAGAAAATGAAGAAAATCATATCTTTTTCTTCCAGCTTCCCCATTAAAAGTCAATAAACAACATAAAGAGGTTATGCATCCTGATGTCCTTTCAGCTTTTGTATTTCATGCTTGCTTTTATTGATGCAGCTGTGATGTGTAAAGTTTTCTGAGTGAATACTCTGGAATAGATGAGGGAGACTGAAGGAGCACTGACATCTTCTACTACTTGTTTTCGTATAGATTTAAACAGCTTGGTCCTCGACATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTT</genome_strand>
        <mrna_strand>CCAAGGCAGTTTCAGTATCAAATTTGAAATGTTGGATTGTATAAAGGAGTGTCAGAACACGGTATTTCAGTTTCAACATATCTCTAGGTAGCAATGAAGCTATCCGTCGCTAATTCTACCCCCTCTTCCATCCCAAAGAAGATTAAAAGAAGTAAATAGCCTAATTATAGTGTCTCATTAGATAGTATAATCCACATGTAGAAAATGAAGAAAATCATATCTTTTTCTTCCAGCTTCCCCATTAAAAGTCAATAAACAACATAAAGAGGTTATGCATCCTGATGTCCTTTCAGCTTTTGTATTTCATGCTTGCTTTTATTGATGCAGCTGTGATGTGTAAAGTTTTCTGAGTGAATACTCTGGAATAGATGAGGGAGACTGAAGGAGCACTGACATCTTCTACTACTTGTTTTCGTATAGATTTAAACAGCTTGGTCCTCGACATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E550826" ref_strand="+" ref_description="SGN-E550826 [TUS-50-O16]">
      <seq>tcaaatttgaaatgttggattgtataaaggagtgtcagaacacggtatttcagtttcaacatatctctaggtagcaatgaagctatccgtcgctaattctaccccctcttccatcccaaagaagattaaaagaagtaaatagcctaattatagtgtctcattagatagtataatccacatgtagaaaatgaagaaaatcatatctttttcttccagcttccccattaaaagtcaataaacaacataaagaggttatgcatcctgatgtcctttcagcttttgtatttcatgcttgcttttattgatgcagctgtgatgtgtaaagttttctgagtgaatactctggaatagatgagggagactgaaggagcactgacatcttctactacttgttttcgtatagatttaaacagcttggtcctcgacattacttgcatcttttccccctgtaaaatgtttttttttggtgattttttaatttttctgtgatgtctaaattgcgatgtgtctctacatcactccttttggtgtctacagattgcttttacagggtccacagaaactggtaaagctgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="29643" stop="30817"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29943" g_stop="30517" g_length="575"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="575" r_length="575" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E550826" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E550826" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29943" e_stop="30517"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAATTTGAAATGTTGGATTGTATAAAGGAGTGTCAGAACACGGTATTTCAGTTTCAACATATCTCTAGGTAGCAATGAAGCTATCCGTCGCTAATTCTACCCCCTCTTCCATCCCAAAGAAGATTAAAAGAAGTAAATAGCCTAATTATAGTGTCTCATTAGATAGTATAATCCACATGTAGAAAATGAAGAAAATCATATCTTTTTCTTCCAGCTTCCCCATTAAAAGTCAATAAACAACATAAAGAGGTTATGCATCCTGATGTCCTTTCAGCTTTTGTATTTCATGCTTGCTTTTATTGATGCAGCTGTGATGTGTAAAGTTTTCTGAGTGAATACTCTGGAATAGATGAGGGAGACTGAAGGAGCACTGACATCTTCTACTACTTGTTTTCGTATAGATTTAAACAGCTTGGTCCTCGACATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGT</genome_strand>
        <mrna_strand>TCAAATTTGAAATGTTGGATTGTATAAAGGAGTGTCAGAACACGGTATTTCAGTTTCAACATATCTCTAGGTAGCAATGAAGCTATCCGTCGCTAATTCTACCCCCTCTTCCATCCCAAAGAAGATTAAAAGAAGTAAATAGCCTAATTATAGTGTCTCATTAGATAGTATAATCCACATGTAGAAAATGAAGAAAATCATATCTTTTTCTTCCAGCTTCCCCATTAAAAGTCAATAAACAACATAAAGAGGTTATGCATCCTGATGTCCTTTCAGCTTTTGTATTTCATGCTTGCTTTTATTGATGCAGCTGTGATGTGTAAAGTTTTCTGAGTGAATACTCTGGAATAGATGAGGGAGACTGAAGGAGCACTGACATCTTCTACTACTTGTTTTCGTATAGATTTAAACAGCTTGGTCCTCGACATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E688547" ref_strand="+" ref_description="SGN-E688547 [t3_tus_50_o16]">
      <seq>tcaaatttgaaatgttggattgtataaaggagtgtcagaacacggtatttcagtttcaacatatctctaggtagcaatgaagctatccgtcgctaattctaccccctcttccatcccaaagaagattaaaagaagtaaatagcctaattatagtgtctcattagatagtataatccacatgtagaaaatgaagaaaatcatatctttttcttccagcttccccattaaaagtcaataaacaacataaagaggttatgcatcctgatgtcctttcagcttttgtatttcatgcttgcttttattgatgcagctgtgatgtgtaaagttttctgagtgaatactctggaatagatgagggagactgaaggagcactgacatcttctactacttgttttcgtatagatttaaacagcttggtcctcgacattacttgcatcttttccccctgtaaaatgtttttttttggtgattttttaatttttctgtgatgtctaaattgcgatgtgtctctacatcactccttttggtgtctacagattgcttttacagggtccacagaaactggtaaagctgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="29643" stop="30817"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29943" g_stop="30517" g_length="575"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="575" r_length="575" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E688547" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E688547" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29943" e_stop="30517"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAATTTGAAATGTTGGATTGTATAAAGGAGTGTCAGAACACGGTATTTCAGTTTCAACATATCTCTAGGTAGCAATGAAGCTATCCGTCGCTAATTCTACCCCCTCTTCCATCCCAAAGAAGATTAAAAGAAGTAAATAGCCTAATTATAGTGTCTCATTAGATAGTATAATCCACATGTAGAAAATGAAGAAAATCATATCTTTTTCTTCCAGCTTCCCCATTAAAAGTCAATAAACAACATAAAGAGGTTATGCATCCTGATGTCCTTTCAGCTTTTGTATTTCATGCTTGCTTTTATTGATGCAGCTGTGATGTGTAAAGTTTTCTGAGTGAATACTCTGGAATAGATGAGGGAGACTGAAGGAGCACTGACATCTTCTACTACTTGTTTTCGTATAGATTTAAACAGCTTGGTCCTCGACATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGT</genome_strand>
        <mrna_strand>TCAAATTTGAAATGTTGGATTGTATAAAGGAGTGTCAGAACACGGTATTTCAGTTTCAACATATCTCTAGGTAGCAATGAAGCTATCCGTCGCTAATTCTACCCCCTCTTCCATCCCAAAGAAGATTAAAAGAAGTAAATAGCCTAATTATAGTGTCTCATTAGATAGTATAATCCACATGTAGAAAATGAAGAAAATCATATCTTTTTCTTCCAGCTTCCCCATTAAAAGTCAATAAACAACATAAAGAGGTTATGCATCCTGATGTCCTTTCAGCTTTTGTATTTCATGCTTGCTTTTATTGATGCAGCTGTGATGTGTAAAGTTTTCTGAGTGAATACTCTGGAATAGATGAGGGAGACTGAAGGAGCACTGACATCTTCTACTACTTGTTTTCGTATAGATTTAAACAGCTTGGTCCTCGACATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E246306" ref_strand="+" ref_description="SGN-E246306 [cLEF-40-J19]">
      <seq>cattacttgcatcttttccccctgtaaaatgtttttttttggtgattttttaatttttctgtgatgtctaaattgcgatgtgtctctacatcactccttttggtgtctacagattgcttttacagggtccacagaaactggtaaagctgtcgtaggtgcagctgcaaagagcaacctaaaacctgtgacattggagctcggaggaaaatctcctttcatcatttgtgaagatgcagacgttgataaagctgttgagttggctcattctgctgttttctttaaccagggacaatgctgctgtgctggatctcggacattcgtacatgaaagagtatatgatgaatttgtggagaaagccaaagctcgtgctttaaaacgcattgttggagaccctttcaagaagggagttgaacaaggtccgcagattgatacagagcaatttgagaagatcctgaagtacataaaatctggtactgaaagcggggctactctcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="30068" stop="31520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30368" g_stop="30653" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30654" i_stop="30732" i_length="79">
            <donor d_prob="0.933" d_score="1.00"/>
            <acceptor a_prob="0.857" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30733" g_stop="30870" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="424" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30871" i_stop="31150" i_length="280">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31151" g_stop="31220" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="494" r_length="70" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E246306" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>494</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E246306" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30368" e_stop="30653"/>
          <exon e_start="30733" e_stop="30870"/>
          <exon e_start="31151" e_stop="31220"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAGGTAGCAAAAATTTCCACTCTTGGAAAATTGCAACCTCTGATGCTTGCTCCAGAATGGAATAAATTTCAAGTATCTGCAGGGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAGGTACTGTTTTTTCGTGTATCGCTGTCCCCTCTGTCATGGATAATATATAAAAAGAGAATAGTTAAACAAATTCTTTGCCAACTTAAGGACAAGAAGGAATAATATATGTTCACCAATTTGGATGTAGCCAACTTTTCAGGCAATGGTACCTTTATTATTTCCTTTTCAGCATCTTACACAAACTTAAATCATGAATTTCCAGCAAAGAGAAGTAGTAATTACGGACTTCCATTTACATTTCTGAAGTAGTTGTAACATGAATGTTTTGTGTTATCAATAGATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCG</genome_strand>
        <mrna_strand>CATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAG...............................................................................GGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAG........................................................................................................................................................................................................................................................................................ATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E338365" ref_strand="+" ref_description="SGN-E338365 [cTOE-13-N12]">
      <seq>gataagattgcttttacagggtccacagaaactggtaaagctgtcgtaggtgcagctgcaaagagcaacctaaaacctgtgacattggagctcggaggaaaatctcctttcatcatttgtgaagatgcagacgttgataaagctgttgagttggctcattctgctgttttctttaaccagggacaatgctgctgtgctggatctcggacattcgtacatgaaagagtatatgatgaatttgtggagaaagccaaagctcgtgctttaaaacgcattgttggagaccctttcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="30175" stop="31146"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30473" g_stop="30653" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="180" r_length="180" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30654" i_stop="30732" i_length="79">
            <donor d_prob="0.933" d_score="1.00"/>
            <acceptor a_prob="0.857" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30733" g_stop="30846" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="294" r_length="114" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E338365" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>295</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E338365" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30473" e_stop="30653"/>
          <exon e_start="30733" e_stop="30846"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAGGTAGCAAAAATTTCCACTCTTGGAAAATTGCAACCTCTGATGCTTGCTCCAGAATGGAATAAATTTCAAGTATCTGCAGGGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAG</genome_strand>
        <mrna_strand>GATA-AGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAG...............................................................................GGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E229381" ref_strand="+" ref_description="SGN-E229381 [cLEL-4-J9](-)">
      <seq>aagctgtcgtaggtgcagctgcaaagagcaacctaaaacctgtgacattggagctcggaggaaaatctcctttcatcatttgtgaagatgcagacgttgataaagctgttgagttggctcattctgctgttttctttaaccagggacaatgctgctgtgctggatctcggacattcgtacatgaaagagtatatgatgaatttgtggagaaagccaaagctcgtgctttaaaacgcattgttggagaccctttcaagaagggagttgaacaaggtccgcagattgatacagagcaatttgagaagatcctgaagtacataaaatctggtactaaaagcggggca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="30211" stop="31512"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30511" g_stop="30653" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="143" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30654" i_stop="30732" i_length="79">
            <donor d_prob="0.933" d_score="1.00"/>
            <acceptor a_prob="0.857" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30733" g_stop="30870" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="281" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30871" i_stop="31150" i_length="280">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31151" g_stop="31213" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="344" r_length="63" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E229381" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>344</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E229381" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30511" e_stop="30653"/>
          <exon e_start="30733" e_stop="30870"/>
          <exon e_start="31151" e_stop="31213"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAGGTAGCAAAAATTTCCACTCTTGGAAAATTGCAACCTCTGATGCTTGCTCCAGAATGGAATAAATTTCAAGTATCTGCAGGGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAGGTACTGTTTTTTCGTGTATCGCTGTCCCCTCTGTCATGGATAATATATAAAAAGAGAATAGTTAAACAAATTCTTTGCCAACTTAAGGACAAGAAGGAATAATATATGTTCACCAATTTGGATGTAGCCAACTTTTCAGGCAATGGTACCTTTATTATTTCCTTTTCAGCATCTTACACAAACTTAAATCATGAATTTCCAGCAAAGAGAAGTAGTAATTACGGACTTCCATTTACATTTCTGAAGTAGTTGTAACATGAATGTTTTGTGTTATCAATAGATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCT</genome_strand>
        <mrna_strand>AAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAG...............................................................................GGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAG........................................................................................................................................................................................................................................................................................ATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTAAAAGCGGGGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E229740" ref_strand="+" ref_description="SGN-E229740 [cLEL-4-J9](-)">
      <seq>caacctaaaacctgtgacattgaagctcgaaggaaaatctcctttcatcatttgtgaagatgcagacgttgataaagctgttgagttggctcattctgctgttttctttaaccagggacaatgctgctgtgctggatctcggacattcgtacatgaaagagtatatgatgaatttgtggagaaagccaaagctcgtgctttaaaacgcattgttggagaccctttcaagaagggagttgaacaaggtccgcagattgatacagagcaatttgagaagatcctgaagtacataaaatctggtactgaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="30239" stop="31506"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30539" g_stop="30653" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30654" i_stop="30732" i_length="79">
            <donor d_prob="0.933" d_score="1.00"/>
            <acceptor a_prob="0.857" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30733" g_stop="30870" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="253" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30871" i_stop="31150" i_length="280">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31151" g_stop="31206" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="309" r_length="56" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E229740" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>309</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E229740" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30539" e_stop="30653"/>
          <exon e_start="30733" e_stop="30870"/>
          <exon e_start="31151" e_stop="31206"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAGGTAGCAAAAATTTCCACTCTTGGAAAATTGCAACCTCTGATGCTTGCTCCAGAATGGAATAAATTTCAAGTATCTGCAGGGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAGGTACTGTTTTTTCGTGTATCGCTGTCCCCTCTGTCATGGATAATATATAAAAAGAGAATAGTTAAACAAATTCTTTGCCAACTTAAGGACAAGAAGGAATAATATATGTTCACCAATTTGGATGTAGCCAACTTTTCAGGCAATGGTACCTTTATTATTTCCTTTTCAGCATCTTACACAAACTTAAATCATGAATTTCCAGCAAAGAGAAGTAGTAATTACGGACTTCCATTTACATTTCTGAAGTAGTTGTAACATGAATGTTTTGTGTTATCAATAGATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAG</genome_strand>
        <mrna_strand>CAACCTAAAACCTGTGACATTGAAGCTCGAAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAG...............................................................................GGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAG........................................................................................................................................................................................................................................................................................ATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E542978" ref_strand="+" ref_description="SGN-E542978 [TUS-64-I23](-)">
      <seq>ttgatgaatttgtggagaaagccaaagctcgtgctttaaaacgcattgttggagacccttcaaagaagggagttgaacaaggtccgcagattgatacagagcaatttgagaagatcctgaagtacataaaatctggtactgaaagcggggctactctcgagtctggaggggaaaaattgggttccaagggcttctatgtccaacctactgtcttctcaaatgtccaggataacatgctgattgccagagatgagatatttggaccagtgcagtccctcttgaaattcaaggatgttgaagaggtcatccgaagggcaaactcgtcacattatgggttggcagcgggtgtttttacccagaatatagatgcagccaacacaatatctcgagcccttagagtagggacagtgtgggttaactgctttaacatctttgatgctgccattccgtttggtggttataagatgagtggacatggaagagagaagggagtctacagcctaagtaactacttgcaagtcaaagctattgttacccctctgaagaatccagcatggctgtagttttcccccctgctttctggtactcctgagatgtcgtgcaacacggcaatcttgtcttttagaggtcacttgtatacagtgtagataagaccaaaacgctgtattgtgtgtgtgttattgtttgttactaacttcttatgatttgataacaatatgcaaacttgtttgtgtgagacctttcttgatttctgtagctctgatgcaaaataggatcttgtgtttgagttttgtgggaatgtaatgaattatatatagatgtaatgttataattcaaaaaaaaaaaaagaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="30483" stop="32388"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30782" g_stop="30870" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30871" i_stop="31150" i_length="280">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31151" g_stop="31288" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="227" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31289" i_stop="31397" i_length="109">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31398" g_stop="31459" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="289" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31460" i_stop="31538" i_length="79">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31539" g_stop="32085" g_length="547"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="836" r_length="547" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="837" polyA_stop="852"/>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E542978" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>836</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E542978" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30782" e_stop="30870"/>
          <exon e_start="31151" e_stop="31288"/>
          <exon e_start="31398" e_stop="31459"/>
          <exon e_start="31539" e_stop="32085"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAGGTACTGTTTTTTCGTGTATCGCTGTCCCCTCTGTCATGGATAATATATAAAAAGAGAATAGTTAAACAAATTCTTTGCCAACTTAAGGACAAGAAGGAATAATATATGTTCACCAATTTGGATGTAGCCAACTTTTCAGGCAATGGTACCTTTATTATTTCCTTTTCAGCATCTTACACAAACTTAAATCATGAATTTCCAGCAAAGAGAAGTAGTAATTACGGACTTCCATTTACATTTCTGAAGTAGTTGTAACATGAATGTTTTGTGTTATCAATAGATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAGGTATAACTGCCATTGTCCATAGAATATATCCATACGTAAGGTGAAAAAGATGAGCATCGTACTGATGACATTTAATTGTTTTGTTTAAAATTATTTTTCAACTATTTAGGATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAAGTGAGATTACATTTCATTTGTATTGTATCTGTGCTTGTATTTTGTTTATTAACACTGAACCTGACCTTGAAACAAACAGGGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTTAGAGGTCACTTGTATACAGTGTAGATAAGACCAAAACGCTGTATTGTGTGTGTGTTATTGTTTGTTACTAACTTCTTATGATTTGATAACAATATGCAAACTTGTTTGTGTGAGACCTTTCTTGATTTCTGTAGCTCTGATGCAAAATAGGATCTTGTGTTTGAGTTTTGTGGGAATGTAATGAATTATATATAGATGTAATGTTATAATTCT</genome_strand>
        <mrna_strand>TTGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTCAAAGAAGGGAGTTGAACAAGGTCCGCAG........................................................................................................................................................................................................................................................................................ATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAG.............................................................................................................GATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAA...............................................................................GGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTTAGAGGTCACTTGTATACAGTGTAGATAAGACCAAAACGCTGTATTGTGTGTGTGTTATTGTTTGTTACTAACTTCTTATGATTTGATAACAATATGCAAACTTGTTTGTGTGAGACCTTTCTTGATTTCTGTAGCTCTGATGCAAAATAGGATCTTGTGTTTGAGTTTTGTGGGAATGTAATGAATTATATATAGATGTAATGTTATAATTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E271494" ref_strand="+" ref_description="SGN-E271494 [cLEM-5-P20]">
      <seq>agaaagccaaagctcgtgctttaaaacgcattgttggagacccttgtaagaagggagttgaacaagattgatacagagcaatttgagaagatcctgaagtacataaaatctggtactgaaagcggggctactctcgagtctggaggggaaaaattgggttccaagggcttctatgtccaacctactgtcttctcaaatgtccaggataacatgctgattgccagagatgagatatttggaccagtgcagtccctcttgaaattcaaggatgttgaagaggtcatccgaagggcaaactcgtcacattatgggttggcagcgggtgtttttacccagaatatagatgcagccaacacaatatctcgagcccttagagtagggacagtgtgggttaactgctttaacatctttgatgctgccattccgtttggtggttataagatgagtggacatggaagagagaagggagtctacagcctaagtaactacttgcaagtcaaagctattgttacccctctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="30497" stop="32091"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30797" g_stop="30862" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30863" i_stop="31150" i_length="288">
            <donor d_prob="0.597" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31151" g_stop="31288" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="204" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31289" i_stop="31397" i_length="109">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31398" g_stop="31459" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="266" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31460" i_stop="31538" i_length="79">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31539" g_stop="31791" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="519" r_length="253" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E271494" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E271494" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30797" e_stop="30862"/>
          <exon e_start="31151" e_stop="31288"/>
          <exon e_start="31398" e_stop="31459"/>
          <exon e_start="31539" e_stop="31791"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAGGTACTGTTTTTTCGTGTATCGCTGTCCCCTCTGTCATGGATAATATATAAAAAGAGAATAGTTAAACAAATTCTTTGCCAACTTAAGGACAAGAAGGAATAATATATGTTCACCAATTTGGATGTAGCCAACTTTTCAGGCAATGGTACCTTTATTATTTCCTTTTCAGCATCTTACACAAACTTAAATCATGAATTTCCAGCAAAGAGAAGTAGTAATTACGGACTTCCATTTACATTTCTGAAGTAGTTGTAACATGAATGTTTTGTGTTATCAATAGATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAGGTATAACTGCCATTGTCCATAGAATATATCCATACGTAAGGTGAAAAAGATGAGCATCGTACTGATGACATTTAATTGTTTTGTTTAAAATTATTTTTCAACTATTTAGGATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAAGTGAGATTACATTTCATTTGTATTGTATCTGTGCTTGTATTTTGTTTATTAACACTGAACCTGACCTTGAAACAAACAGGGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTG</genome_strand>
        <mrna_strand>AGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTGTAAGAAGGGAGTTGAACAAG................................................................................................................................................................................................................................................................................................ATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAG.............................................................................................................GATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAA...............................................................................GGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E245692" ref_strand="+" ref_description="SGN-E245692 [cLEF-48-M15]">
      <seq>gccaaagctcgtgctttaaaacgcattgttggagaccctttcaagaagggagttgaacaagattgatacagagcaatttgagaagatcctgaagtacataaaatctggtactgaaagcggggctactctcgagtctggaggggaaaaattgggttccaagggcttctatgtccaacctactgtcttctcaaatgtccaggataacatgctgattgccagagatgagatatttggaccagtgcagtccctcttgaaattcaaggatgttgaagaggtcatccgaaaggcaaactcgtcacattatgggttggcagcgggtgtttttacccagaatatagatgcagccaacacaatatctcgagcccttagagtagggacagtgtgggttaactgctttaacatctttgatgctgccattccgtttggtggttataagatgagtggacatggaagagagaagggagtctacagcctaaataactacttgcaagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="30502" stop="32070"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30802" g_stop="30862" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30863" i_stop="31150" i_length="288">
            <donor d_prob="0.597" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31151" g_stop="31288" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="199" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31289" i_stop="31397" i_length="109">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31398" g_stop="31459" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="261" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31460" i_stop="31538" i_length="79">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31539" g_stop="31770" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="493" r_length="232" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E245692" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>493</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E245692" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30802" e_stop="30862"/>
          <exon e_start="31151" e_stop="31288"/>
          <exon e_start="31398" e_stop="31459"/>
          <exon e_start="31539" e_stop="31770"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAGGTACTGTTTTTTCGTGTATCGCTGTCCCCTCTGTCATGGATAATATATAAAAAGAGAATAGTTAAACAAATTCTTTGCCAACTTAAGGACAAGAAGGAATAATATATGTTCACCAATTTGGATGTAGCCAACTTTTCAGGCAATGGTACCTTTATTATTTCCTTTTCAGCATCTTACACAAACTTAAATCATGAATTTCCAGCAAAGAGAAGTAGTAATTACGGACTTCCATTTACATTTCTGAAGTAGTTGTAACATGAATGTTTTGTGTTATCAATAGATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAGGTATAACTGCCATTGTCCATAGAATATATCCATACGTAAGGTGAAAAAGATGAGCATCGTACTGATGACATTTAATTGTTTTGTTTAAAATTATTTTTCAACTATTTAGGATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAAGTGAGATTACATTTCATTTGTATTGTATCTGTGCTTGTATTTTGTTTATTAACACTGAACCTGACCTTGAAACAAACAGGGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTC</genome_strand>
        <mrna_strand>GCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAG................................................................................................................................................................................................................................................................................................ATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAG.............................................................................................................GATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAA...............................................................................GGATGTTGAAGAGGTCATCCGAAAGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAATAACTACTTGCAAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E264242" ref_strand="+" ref_description="SGN-E264242 [cLEG-70-D3]">
      <seq>ccgcagattgatacagagcaatttgagaagatcctgaagtacataaaatctggtactgaaagcggggctactctcgagtctggaggggaaaaattgggttccaagggcttctatgtccaacctactgtcttctcaaatgtccaggataacatgctgattgccagagatgagatatttggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="30849" stop="31734"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30865" g_stop="30870" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="6" r_length="6" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30871" i_stop="31150" i_length="280">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31151" g_stop="31288" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="144" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31289" i_stop="31397" i_length="109">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31398" g_stop="31434" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="181" r_length="37" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E264242" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>181</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E264242" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30865" e_stop="30870"/>
          <exon e_start="31151" e_stop="31288"/>
          <exon e_start="31398" e_stop="31434"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGCAGGTACTGTTTTTTCGTGTATCGCTGTCCCCTCTGTCATGGATAATATATAAAAAGAGAATAGTTAAACAAATTCTTTGCCAACTTAAGGACAAGAAGGAATAATATATGTTCACCAATTTGGATGTAGCCAACTTTTCAGGCAATGGTACCTTTATTATTTCCTTTTCAGCATCTTACACAAACTTAAATCATGAATTTCCAGCAAAGAGAAGTAGTAATTACGGACTTCCATTTACATTTCTGAAGTAGTTGTAACATGAATGTTTTGTGTTATCAATAGATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAGGTATAACTGCCATTGTCCATAGAATATATCCATACGTAAGGTGAAAAAGATGAGCATCGTACTGATGACATTTAATTGTTTTGTTTAAAATTATTTTTCAACTATTTAGGATAACATGCTGATTGCCAGAGATGAGATATTTGGAC</genome_strand>
        <mrna_strand>CCGCAG........................................................................................................................................................................................................................................................................................ATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAG.............................................................................................................GATAACATGCTGATTGCCAGAGATGAGATATTTGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E264163" ref_strand="+" ref_description="SGN-E264163 [cLEG-64-P1]">
      <seq>aaatctggtactgaaagcggggctactctcgagtctggaggggaaaaattgggttccaagggcttctatgtccaacctactgtcttctcaaatgtccaggataacatgctgattgccagagatgagatatttggaccagtgcagtccctcttgaaattcaaggatgttgaagaggtcatccgaagggcaaactcgtcacattatgggttggcagcgggtgtttttacccagaatatagatgcagccaacacaatatctcgagcccttagagtagggacagtgtgggttaactgctttaacatctttgatgctgccattccgtttggtggttataagatgagtggacatggaagagagaagggagtctacagcctaagtaactacttgcaagtcaaagctattgttacccctctgaagaatccagcatggctgtagttttcccccctgctttctggtactcctgagatgtcgtgcaacacggcaatcttgtctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="30890" stop="32172"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31190" g_stop="31288" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31289" i_stop="31397" i_length="109">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31398" g_stop="31459" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="161" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31460" i_stop="31538" i_length="79">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31539" g_stop="31872" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="495" r_length="334" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E264163" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>495</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E264163" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31190" e_stop="31288"/>
          <exon e_start="31398" e_stop="31459"/>
          <exon e_start="31539" e_stop="31872"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAGGTATAACTGCCATTGTCCATAGAATATATCCATACGTAAGGTGAAAAAGATGAGCATCGTACTGATGACATTTAATTGTTTTGTTTAAAATTATTTTTCAACTATTTAGGATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAAGTGAGATTACATTTCATTTGTATTGTATCTGTGCTTGTATTTTGTTTATTAACACTGAACCTGACCTTGAAACAAACAGGGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTT</genome_strand>
        <mrna_strand>AAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAG.............................................................................................................GATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAA...............................................................................GGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E355126" ref_strand="+" ref_description="SGN-E355126 [cTOS-18-N12]">
      <seq>tcgagtctggaggggaaaaattgggttccaagggcttctatgtccaacctactgtcttctcaaatgtccaggataacatgctgattgccagagatgagatatttggaccagtgcagtccctcttgaaattcaaggatgttgaagaggtcatccgaagggcaaactcgtcacattatgggttggcagcgggtgtttttacccagaatatagatgcagccaacacaatatctcgagcccttagagtagggacagtgtgggttaactgctttaacatctttgatgctgccattccgtttggtggttataagatgagtggacatggaagagagaagggagtctacagcctaagtaactacttgcaagtcaaagctattgttacccctctgaagaatccagcatggctgtagttttcccccctgctttctggtactcctgagatgtcgtgcaacacggcaatcttgtcttttagaggtcacttgtatacagtgtagataagaccaaaacgctgtattgtgtgtgtgttattgtttgttactaacttcttatgatttgataacaatatgcaaacttgtttgtgtgagacctttcttgatttctgtagctctgatgcaaaataggatcttgtgtttgagttttgtgggaaaatgtatgattatatatagatgtaatgttataattctatattactaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="30918" stop="32394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31218" g_stop="31288" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31289" i_stop="31397" i_length="109">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31398" g_stop="31459" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="133" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31460" i_stop="31538" i_length="79">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31539" g_stop="32103" g_length="565"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="698" r_length="565" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E355126" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355126" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31218" e_stop="31288"/>
          <exon e_start="31398" e_stop="31459"/>
          <exon e_start="31539" e_stop="32103"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAGGTATAACTGCCATTGTCCATAGAATATATCCATACGTAAGGTGAAAAAGATGAGCATCGTACTGATGACATTTAATTGTTTTGTTTAAAATTATTTTTCAACTATTTAGGATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAAGTGAGATTACATTTCATTTGTATTGTATCTGTGCTTGTATTTTGTTTATTAACACTGAACCTGACCTTGAAACAAACAGGGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTTAGAGGTCACTTGTATACAGTGTAGATAAGACCAAAACGCTGTATTGTGTGTGTGTTATTGTTTGTTACTAACTTCTTATGATTTGATAACAATATGCAAACTTGTTTGTGTGAGACCTTTCTTGATTTCTGTAGCTCTGATGCAAAATAGGATCTTGTGTTTGAGTTTTGTGGGAATGTAATGAATTATATATAGATGTAATGTTATAATTCTATATTACTACGGTATATA</genome_strand>
        <mrna_strand>TCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAG.............................................................................................................GATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAA...............................................................................GGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTTAGAGGTCACTTGTATACAGTGTAGATAAGACCAAAACGCTGTATTGTGTGTGTGTTATTGTTTGTTACTAACTTCTTATGATTTGATAACAATATGCAAACTTGTTTGTGTGAGACCTTTCTTGATTTCTGTAGCTCTGATGCAAAATAGGATCTTGTGTTTGAGTTTTGTGGGAAAATGTATGATTATATATAGATGTAATGTTATAATTCTATATTACTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E349395" ref_strand="+" ref_description="SGN-E349395 [cTOS-1-F5]">
      <seq>tcgagtctggaggggaaaaattgggttccaagggcttctatgtccaacctactgtcttctcaaatgtccaggataacatgctgattgccagagatgagatatttggaccagtgcagtccctcttgaaattcaaggatgttgaagaggtcatccgaagggcaaactcgtcacattatgggttggcagcgggtgtttttacccagaatatagatgcagccaacacaatatctcgagcccttagagtagggacagtgtgggttaactgctttaacatctttgatgctgccattccgtttggtggttataagatgagtggacatggaagagagaagggagtctacagcctaagtaactacttgcaagtcaaagctattgttacccctctgaagaatccagcatggctgtagttttcccccctgctttctggtactcctgagatgtcgtgcaacacggcaatcttgtcttttagaggtcacttgtatacagtgtagataagaccaaaacgctgtattgtgtgtgtgttattgtttgttactaacttcttatgatttgataacaatatgcaaacttgtttgtgtgagacctttcttgatttctgtagctctgatgcaaaataggatcttgtgtttgagttttgtgggaatgtaatgaattatatatagatgtaatgttataattctatattactaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="30918" stop="32394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31218" g_stop="31288" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31289" i_stop="31397" i_length="109">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31398" g_stop="31459" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="133" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31460" i_stop="31538" i_length="79">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31539" g_stop="32103" g_length="565"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="698" r_length="565" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E349395" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E349395" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31218" e_stop="31288"/>
          <exon e_start="31398" e_stop="31459"/>
          <exon e_start="31539" e_stop="32103"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAGGTATAACTGCCATTGTCCATAGAATATATCCATACGTAAGGTGAAAAAGATGAGCATCGTACTGATGACATTTAATTGTTTTGTTTAAAATTATTTTTCAACTATTTAGGATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAAGTGAGATTACATTTCATTTGTATTGTATCTGTGCTTGTATTTTGTTTATTAACACTGAACCTGACCTTGAAACAAACAGGGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTTAGAGGTCACTTGTATACAGTGTAGATAAGACCAAAACGCTGTATTGTGTGTGTGTTATTGTTTGTTACTAACTTCTTATGATTTGATAACAATATGCAAACTTGTTTGTGTGAGACCTTTCTTGATTTCTGTAGCTCTGATGCAAAATAGGATCTTGTGTTTGAGTTTTGTGGGAATGTAATGAATTATATATAGATGTAATGTTATAATTCTATATTACTACGGTATATA</genome_strand>
        <mrna_strand>TCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAG.............................................................................................................GATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAA...............................................................................GGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTTAGAGGTCACTTGTATACAGTGTAGATAAGACCAAAACGCTGTATTGTGTGTGTGTTATTGTTTGTTACTAACTTCTTATGATTTGATAACAATATGCAAACTTGTTTGTGTGAGACCTTTCTTGATTTCTGTAGCTCTGATGCAAAATAGGATCTTGTGTTTGAGTTTTGTGGGAATGTAATGAATTATATATAGATGTAATGTTATAATTCTATATTACTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E202862" ref_strand="+" ref_description="SGN-E202862 [cLEB-1-B3]">
      <seq>gcacgaggctgattgccagagatgagatatttggaccagtgcagtccctcttgaaattcaaggatgttgaagaggtcatccgaagggcaaactcgtcacattatgggttggcagcgggtgtttttacccagaatatagatgcagccaacacaatatctcgagcccttagagtagggacagtgtgggttaactgctttaacatctttgatgctgccattccgtttggtggttataagatgagtggacatggaagagagaagggagtctacagcctaagtaactacttgcaagtcaaagctattgttacccctctgaagaatccagcatggctgtagttttcccccctgctttctggtactcctgagatgtcgtgcaacacggcaatcttgtcttttagaggtcacttgtatacagtgtagataagaccaaaacgctgtattgtgtgtgtgttattgcttgttactaacttcttatgatttgataacaatatgcaaacttgtttgtgtgagacctttcttgatttctgtagctctgatgcaaaataggaacttgtgtttgagttttgtggggca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="31102" stop="32346"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31399" g_stop="31459" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.918"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31460" i_stop="31538" i_length="79">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31539" g_stop="32049" g_length="511"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="572" r_length="511" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E202862" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>572</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E202862" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31399" e_stop="31459"/>
          <exon e_start="31539" e_stop="32049"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAAGTGAGATTACATTTCATTTGTATTGTATCTGTGCTTGTATTTTGTTTATTAACACTGAACCTGACCTTGAAACAAACAGGGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTTAGAGGTCACTTGTATACAGTGTAGATAAGACCAAAACGCTGTATTGTGTGTGTGTTATTGTTTGTTACTAACTTCTTATGATTTGATAACAATATGCAAACTTGTTTGTGTGAGACCTTTCTTGATTTCTGTAGCTCTGATGCAAAATAGGATCTTGTGTTTGAGTTTTGTGGGAAT</genome_strand>
        <mrna_strand>GCACGAGGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAA...............................................................................GGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTTAGAGGTCACTTGTATACAGTGTAGATAAGACCAAAACGCTGTATTGTGTGTGTGTTATTGCTTGTTACTAACTTCTTATGATTTGATAACAATATGCAAACTTGTTTGTGTGAGACCTTTCTTGATTTCTGTAGCTCTGATGCAAAATAGGAACTTGTGTTTGAGTTTTGTGGGGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E281400" ref_strand="-" ref_description="SGN-E281400 [cLEL-1-A19](-)">
      <seq>gcacgaggctgattgccagagatgagatatttggaccagtgcagtccctcttgaaattcaaggatgttgaagaggtcatccgaagggcacactcgtcacattatgggttggcagcgggtgtttttacccagaatatagatgcagccaacacaatatctcgagcccttagagtagggacagtgtgggttaactgctttaacatctttgatgctgccattccgtttggtggttataagatgagtggacatggaagagagaagggagtctacagcctaagtaactacttgcaagtcaaagctattgttacccctctgaagaatccagcatggctgtagttttcccccctgctatctggtactcctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="31102" stop="32140"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31399" g_stop="31459" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.918"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31460" i_stop="31538" i_length="79">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31539" g_stop="31840" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="363" r_length="302" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E281400" ref_strand="-">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>363</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E281400" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="31399" e_stop="31459"/>
          <exon e_start="31539" e_stop="31840"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAAGTGAGATTACATTTCATTTGTATTGTATCTGTGCTTGTATTTTGTTTATTAACACTGAACCTGACCTTGAAACAAACAGGGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTG</genome_strand>
        <mrna_strand>GCACGAGGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAA...............................................................................GGATGTTGAAGAGGTCATCCGAAGGGCACACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTATCTGGTACTCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E733861" ref_strand="+" ref_description="SGN-E733861 [LB11AE12]">
      <seq>cgatagtgcagtccctcttgaaattcaaggatgttgaagaggtcatccgaagggcaaactcgtcacattatgggttggcagcgggtgtttttacccagaatatagatgcagccaacacaatatctcgagcccttagagtagggacagtgtgggttaactgctttaacatctttgatgctgccattccgtttggtggttataagatgagtggacatggaagagagaagggagtctacagcctaagtaactacttgcaagtcaaagctattgttacccctctgaagaatccagcatggctgtagttttcccccctgctttctggtactcctgagatgtcgtgcaacacggcaatcttgtcttttagaggtcacttgtatacagtgtagataagaccaaaacgctgtattgtgtgtgtgttattgtttgttactaacttcttatgatttgataacaatatgcaaacttgtttgtgtgaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="31136" stop="32287"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31431" g_stop="31459" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="28" r_length="28" r_score="0.897"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31460" i_stop="31538" i_length="79">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31539" g_stop="31981" g_length="443"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="471" r_length="443" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="475" polyA_stop="498"/>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E733861" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E733861" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31431" e_stop="31459"/>
          <exon e_start="31539" e_stop="31981"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGACCAGTGCAGTCCCTCTTGAAATTCAAGTGAGATTACATTTCATTTGTATTGTATCTGTGCTTGTATTTTGTTTATTAACACTGAACCTGACCTTGAAACAAACAGGGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTTAGAGGTCACTTGTATACAGTGTAGATAAGACCAAAACGCTGTATTGTGTGTGTGTTATTGTTTGTTACTAACTTCTTATGATTTGATAACAATATGCAAACTTGTTTGT</genome_strand>
        <mrna_strand>CGAT-AGTGCAGTCCCTCTTGAAATTCAA...............................................................................GGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTTAGAGGTCACTTGTATACAGTGTAGATAAGACCAAAACGCTGTATTGTGTGTGTGTTATTGTTTGTTACTAACTTCTTATGATTTGATAACAATATGCAAACTTGTTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E256282" ref_strand="+" ref_description="SGN-E256282 [cLEG-37-J12]">
      <seq>gatgttgaaaaggtcatccgaagggcaaactcgtcacattatgggttggcagcgggtgtttttacccacaatatagatgcagccaacacaatatctcgagcccttagagtagggacagtgtgggttaactgctttaacatctttgatgctgccattccgtttggtggttataagatgagtggacatggaagagagaagggagtctacagcctaagtaactacttgcaagtcaaagctattgttacccctctgaataatccagcatggctgtagttttcccccctgctttctggtactcctgagatgtcgtgcaacacggcaatcttgtcttttagaggtcacttgtctacagtgtagataagaccaaaacgctgtattgcgtgtgtgttattgtttgttactaacttcttatgattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="31240" stop="32256"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31540" g_stop="31956" g_length="417"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="417" r_length="417" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E256282" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E256282" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31540" e_stop="31956"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTTAGAGGTCACTTGTATACAGTGTAGATAAGACCAAAACGCTGTATTGTGTGTGTGTTATTGTTTGTTACTAACTTCTTATGATTT</genome_strand>
        <mrna_strand>GATGTTGAAAAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCACAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAATAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTTAGAGGTCACTTGTCTACAGTGTAGATAAGACCAAAACGCTGTATTGCGTGTGTGTTATTGTTTGTTACTAACTTCTTATGATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E300805" ref_strand="+" ref_description="SGN-E300805 [cLEW-8-E8]">
      <seq>ttttttgaacaagatatataccgtagtaatatagaattataacattacatctatatataattcattacattcccacaaaactcaaacacaagatcctattttgcatcagagctacagaaatcaagaaaggtctcacacaaacaagtttgcatattgttatcaaatcataagaagttagtaacaaacaagtaacacacacacaatacagcgttttggtcttatctacactgtatacaagtgacctctaaaagacaagattgccgtgttgcacgacatctcaggagtaccagaaagcaggggggaaaactacagccatgctggattcttcagaggggtaacaatagctttgacttgcaagtagttacttaggctgtagactcccttctctcttgcatgtccactcatcttataaccaccaaacggaatggcagcatcaaagatgttaaagcagttgacccacactgtccctactctaagggctcgagatattgtgtaggctgcatctatattctgggtaaaaacacccgctgccaacccataatgtgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="32417" stop="31272"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32117" g_stop="31572" g_length="546"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="547" r_length="547" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E300805" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E300805" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32117" e_stop="31572"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTGAACAAGATATATACCGTAGTAATATAGAATTATAACATTACATCTATATATAATTCATTACATTCCCACAAAACTCAAACACAAGATCCTATTTTGCATCAGAGCTACAGAAATCAAGAAAGGTCTCACACAAACAAGTTTGCATATTGTTATCAAATCATAAGAAGTTAGTAACAAACAA-TAACACACACACAATACAGCGTTTTGGTCTTATCTACACTGTATACAAGTGACCTCTAAAAGACAAGATTGCCGTGTTGCACGACATCTCAGGAGTACCAGAAAGCAGGGGGGAAAACTACAGCCATGCTGGATTCTTCAGAGGGGTAACAATAGCTTTGACTTGCAAGTAGTTACTTAGGCTGTAGACTCCCTTCTCTCTTCCATGTCCACTCATCTTATAACCACCAAACGGAATGGCAGCATCAAAGATGTTAAAGCAGTTAACCCACACTGTCCCTACTCTAAGGGCTCGAGATATTGTGTTGGCTGCATCTATATTCTGGGTAAAAACACCCGCTGCCAACCCATAATGTGAC</genome_strand>
        <mrna_strand>TTTTTTGAACAAGATATATACCGTAGTAATATAGAATTATAACATTACATCTATATATAATTCATTACATTCCCACAAAACTCAAACACAAGATCCTATTTTGCATCAGAGCTACAGAAATCAAGAAAGGTCTCACACAAACAAGTTTGCATATTGTTATCAAATCATAAGAAGTTAGTAACAAACAAGTAACACACACACAATACAGCGTTTTGGTCTTATCTACACTGTATACAAGTGACCTCTAAAAGACAAGATTGCCGTGTTGCACGACATCTCAGGAGTACCAGAAAGCAGGGGGGAAAACTACAGCCATGCTGGATTCTTCAGAGGGGTAACAATAGCTTTGACTTGCAAGTAGTTACTTAGGCTGTAGACTCCCTTCTCTCTTGCATGTCCACTCATCTTATAACCACCAAACGGAATGGCAGCATCAAAGATGTTAAAGCAGTTGACCCACACTGTCCCTACTCTAAGGGCTCGAGATATTGTGTAGGCTGCATCTATATTCTGGGTAAAAACACCCGCTGCCAACCCATAATGTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E281199" ref_strand="+" ref_description="SGN-E281199 [cLEL-1-A19]">
      <seq>gccccacaaaactcaaacacaagatcctattttgcatcagagctacagaaatcaagaacggtctcacacaaacaagtttgcatattgttatcaaatcataagaagttagtaacaaacaataacacacacacaatacagcgttttggtcttatctacactgtatacaagtgacctctaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="32346" stop="31568"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32048" g_stop="31868" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E281199" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>181</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E281199" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32048" e_stop="31868"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCCACAAAACTCAAACACAAGATCCTATTTTGCATCAGAGCTACAGAAATCAAGAAAGGTCTCACACAAACAAGTTTGCATATTGTTATCAAATCATAAGAAGTTAGTAACAAACAATAACACACACACAATACAGCGTTTTGGTCTTATCTACACTGTATACAAGTGACCTCTAAAAG</genome_strand>
        <mrna_strand>GCCCCACAAAACTCAAACACAAGATCCTATTTTGCATCAGAGCTACAGAAATCAAGAACGGTCTCACACAAACAAGTTTGCATATTGTTATCAAATCATAAGAAGTTAGTAACAAACAATAACACACACACAATACAGCGTTTTGGTCTTATCTACACTGTATACAAGTGACCTCTAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E253024" ref_strand="-" ref_description="SGN-E253024 [cLEG-25-N10]">
      <seq>gttgttagaactgcaaaatatttacgaaaaagcattcaatgttatccccccaccagtagtgaatgaagacccagaaacaattcccgtgagtgaggacccagaaacaatatcctgggagcatttctgtcaatcaaagctctcacctttgagtgctcaagcagttcttcgtgtaaccaatctcactagggagggtattgttttaggttcatagtatttgttcaagcaatgagctataattcaccattgtcctccattttttggtttggtttcttatacctgtatataccatgaaaggtttcaggtgtttgcgaggcagttagaccatatatagagctatagttctatagtttcttgaaatatggtttagattacgtttgcattatacttaaagtcattcatgaatgcttgctttgcattgcagtatacatgtaattgtgctcgttcatttttcccatggtatgttaatgattgaaaagcaaaaaaaaaaaaaaaaaaaattaactcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="37684" stop="36605"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37384" g_stop="36906" g_length="479"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="479" r_length="479" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="480" polyA_stop="498"/>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E253024" ref_strand="-">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="0.949" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E253024" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="37384" e_stop="36906"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGTTAGAACTGCAAAATATCTACGAAAAAGCATTCAATGTTATCCCCCCACCAGTAGTGAATGAAGACCCAGAAACAATTACCGTGAGTGAGGACCCAGAAACAATATCCTGGGAGCATTTCTGTCAATCAAAGCTCTCACCTTTGAGTGCTCAAGCAGTTCTTCGTGTAACCAATCTCACTAGGGAGGGTATTGTTTTAGGTTCATAGTATTTGTTCAAGCAATGAGCTATAATTCACCATTGTCCTCCATTTTTTGGTTTGGTTTCTTATACCTGTATATACCATGAAAGGTTTCAGGTGTTTGCGAGGCAGTTAGACCATATATAGAGCTATAGTTCTATAGTTTCTTGAAATATGGTTTAGATTACGTTTGCATTATACTTAAAGTCATTCATGAATGCTTGCTTTGCATTGCAGTATACATGTAATTGTGCTCGTTCATTTTTCCCATGGTATGTTAATGATTGAAAAGCAA</genome_strand>
        <mrna_strand>GTTGTTAGAACTGCAAAATATTTACGAAAAAGCATTCAATGTTATCCCCCCACCAGTAGTGAATGAAGACCCAGAAACAATTCCCGTGAGTGAGGACCCAGAAACAATATCCTGGGAGCATTTCTGTCAATCAAAGCTCTCACCTTTGAGTGCTCAAGCAGTTCTTCGTGTAACCAATCTCACTAGGGAGGGTATTGTTTTAGGTTCATAGTATTTGTTCAAGCAATGAGCTATAATTCACCATTGTCCTCCATTTTTTGGTTTGGTTTCTTATACCTGTATATACCATGAAAGGTTTCAGGTGTTTGCGAGGCAGTTAGACCATATATAGAGCTATAGTTCTATAGTTTCTTGAAATATGGTTTAGATTACGTTTGCATTATACTTAAAGTCATTCATGAATGCTTGCTTTGCATTGCAGTATACATGTAATTGTGCTCGTTCATTTTTCCCATGGTATGTTAATGATTGAAAAGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E375973" ref_strand="+" ref_description="SGN-E375973 [TUS-40-I16](-)">
      <seq>cattttcaaagcatactgtgacaccatagttgacttgatggatccactgcttgtacaacttcttctgaagtcttcacaagacaagcgatttgtttgcgaggcagctgaaaaagctctaaaagcaatgacaatgtgggtttctccatcgctgttgttaccgaagttgcaaccaaatttgaaacacagaaatcctagaattcgagcaaaagcttcaagctgcttttctcgaagtgtaccacgtctgggagtagagggaattaaagcatatggaattgagaacttgatccgaatagctgcatcgcagctcagtgaccagcttcctgagtcgagggaggccgctcgttcactgttgttagaactgcaaaatatctacgaaaaagcattcaatgttatccccccaccagtagtgaatgaagacccagaaacaattaccgtgagtgaggacccagaaacaatatcctgggagcatttctgtcaatcaaagctctcacctttgagtgctcaagcagtttttcgtgtaaccaatctcactagggagggtattgttttaggttcatagtatttgttcaagcaatgagctataattcaccattgtcctccattttttggtttggtttcttatacctgtatataccatgaaaggtttcaggtgtttgcgaggcagttagaccatatatagagctatagttctatagtttcttgaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="38903" stop="36726"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38603" g_stop="38555" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38554" i_stop="38453" i_length="102">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.785" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38452" g_stop="38258" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="244" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="38257" i_stop="37489" i_length="769">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="37488" g_stop="37022" g_length="467"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="711" r_length="467" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E375973" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>711</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375973" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38603" e_stop="38555"/>
          <exon e_start="38452" e_stop="38258"/>
          <exon e_start="37488" e_stop="37022"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTTCAAAGCATACTGTGACACCATAGTTGACTTGATGGATCCACTGGTAACTTTTCTCTTTTGTGACTTGTGTGACTGCCTTGGCAATATATTTTCACCTAATTTTACCTTGTTCTTGTGCTTATTATGTGACTGTTTCCTTGCTTAGCTTGTACAACTTCTTCTGAAGTCTTCACAAGACAAGCGATTTGTTTGCGAGGCAGCTGAAAAAGCTCTAAAAGCAATGACAATGTGGGTTTCTCCATCGCTGTTGTTACCGAAGTTGCAACCAAATTTGAAACACAGAAATCCTAGAATTCGAGCAAAAGCTTCAAGCTGCTTTTCTCGAAGTGTACCACGTCTGGTGAGAGTTCAAAGTTCTAAAATCTCTTCCTTATGCACCCTGACTTGTGAATTTTAGTAATTACTATTTTCATTCTTACATTTTTTTCCTGCAATTGTTGTTAACGTAGTTTGTTTGTTATTTGCTGACTAATATCTTTTCCCTTGACTGTTTTATAGACAATATCTTGATACAAACTCCACCCTAGGAAACCCTTCTTGAGAGCGTTTTAAGAATTACTTCTTGAGAATGTTTACTAATTACTTTACTGGTTAAAGGAATGGATAGGTAATAATTTGTTTATCTGCTGACTCTGACTAAGATCTTTCCCTTGGCTATGTTTTATTGACAATGCCTTGATGCTGAACTCTACCCTAGTAGGACACCCTTCTTGAGAGCGTTTGAAGAATGAATTTTTCTGATTAAGGAAATGACTAGGTAACAATTTGTCAGTCATTTGAGTATATTAGGAACTTTTACATGGTTTCTCCAATAAGTTTTGTTCACAATGCTATAATTAACCGCTTTCAATACCCTTCTGGTGGTTATTTTATTATTCAGCAGTATAAATTTGTTCTTGTTGAATGAAACAAGAAAGATTACATATTAACGGCCCCTTAACATGGAAACATTTTCTGGCATTTGTGTCTTTTCATGTATGATCATATCACTGAAATGTGAAAGAGGAATAAACTTTGTCCTGTTCTTAGTTTTTGTTTTCTAGCTGGTTGCCCAATTCTCTTTTTACTACTAGATCTGGTCCTTACTAACAGAGTTGCATGTTTTACAGGGAGTAGAGGGAATTAAAGCATATGGAATTGAGAACTTGATCCGAATAGCTGCATCGCAGCTCAGTGACCAGCTTCCTGAGTCGAGGGAGGCCGCTCGTTCACTGTTGTTAGAACTGCAAAATATCTACGAAAAAGCATTCAATGTTATCCCCCCACCAGTAGTGAATGAAGACCCAGAAACAATTACCGTGAGTGAGGACCCAGAAACAATATCCTGGGAGCATTTCTGTCAATCAAAGCTCTCACCTTTGAGTGCTCAAGCAGTTCTTCGTGTAACCAATCTCACTAGGGAGGGTATTGTTTTAGGTTCATAGTATTTGTTCAAGCAATGAGCTATAATTCACCATTGTCCTCCATTTTTTGGTTTGGTTTCTTATACCTGTATATACCATGAAAGGTTTCAGGTGTTTGCGAGGCAGTTAGACCATATATAGAGCTATAGTTCTATAGTTTCTTGAAATATGGT</genome_strand>
        <mrna_strand>CATTTTCAAAGCATACTGTGACACCATAGTTGACTTGATGGATCCACTG......................................................................................................CTTGTACAACTTCTTCTGAAGTCTTCACAAGACAAGCGATTTGTTTGCGAGGCAGCTGAAAAAGCTCTAAAAGCAATGACAATGTGGGTTTCTCCATCGCTGTTGTTACCGAAGTTGCAACCAAATTTGAAACACAGAAATCCTAGAATTCGAGCAAAAGCTTCAAGCTGCTTTTCTCGAAGTGTACCACGTCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTAGAGGGAATTAAAGCATATGGAATTGAGAACTTGATCCGAATAGCTGCATCGCAGCTCAGTGACCAGCTTCCTGAGTCGAGGGAGGCCGCTCGTTCACTGTTGTTAGAACTGCAAAATATCTACGAAAAAGCATTCAATGTTATCCCCCCACCAGTAGTGAATGAAGACCCAGAAACAATTACCGTGAGTGAGGACCCAGAAACAATATCCTGGGAGCATTTCTGTCAATCAAAGCTCTCACCTTTGAGTGCTCAAGCAGTTTTTCGTGTAACCAATCTCACTAGGGAGGGTATTGTTTTAGGTTCATAGTATTTGTTCAAGCAATGAGCTATAATTCACCATTGTCCTCCATTTTTTGGTTTGGTTTCTTATACCTGTATATACCATGAAAGGTTTCAGGTGTTTGCGAGGCAGTTAGACCATATATAGAGCTATAGTTCTATAGTTTCTTGAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E689210" ref_strand="+" ref_description="SGN-E689210 [t3_tus_80_J09]">
      <seq>gtcgttgaagaggagagttcaaaatcatttcgatttgctgctttacccgatcatttcaccgcattttcctgatctaatccatatatgatgtctgaggaagctgctagagatctcattccactacctgaagctgggatgaacaatgagatccccagtaatgggagtgttccagcaataagggttgagagcattgataaaaattcaaaagataaggaaagagaaaatcctgccttactggttggaccttgccttaatggagacggtaaggtgaatactggggcagaggtgggaaattctgaagtggaatacatagaatctgagaatttgaatgatgtagaagatgttgacacaagtctcaagacactgttgactgggcttgactccnaggactgggttttagtctgtgaggcactcaatgacgttcggcgtctgtccctatttcacaaagaagcaatggttgatatgttgagaaatgtgatctcccttgttgtgaaatctttgaaaaatccgagaagtgctgtttgtaagactgctattatggcatcagctgacattttcaaagcatactgtgacaccatagttgacttgatggatccactgcttgtacaacttcttctgaagtcttcacaagacaagcgatttgtttgcgaggcagctgaaaaagctctaaaagcaatgacaatgtgggtttctccatcgctgttgttaccgaagttgcaaccaaatttgaaacacagaaatcctagaattcgagcaaaagcttcaagctgcttttctcgaagtgtaccacgtctgggagtagagggaattaaagcatatggaattgagaacttgatccgaatagctgcatcgcagctcaatgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="41162" stop="37120"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40862" g_stop="40792" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40791" i_stop="39339" i_length="1453">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="39338" g_stop="39050" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="360" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="39049" i_stop="38929" i_length="121">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="38928" g_stop="38822" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="467" r_length="107" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="38821" i_stop="38688" i_length="134">
            <donor d_prob="0.878" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="38687" g_stop="38555" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="468" r_stop="600" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="38554" i_stop="38453" i_length="102">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.785" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="38452" g_stop="38258" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="601" r_stop="795" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="38257" i_stop="37489" i_length="769">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="37488" g_stop="37420" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="796" r_stop="864" r_length="69" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E689210" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>864</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E689210" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40862" e_stop="40792"/>
          <exon e_start="39338" e_stop="39050"/>
          <exon e_start="38928" e_stop="38822"/>
          <exon e_start="38687" e_stop="38555"/>
          <exon e_start="38452" e_stop="38258"/>
          <exon e_start="37488" e_stop="37420"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCGTTGAAGAGGAGAGTTCAAAATCATTTCGATTTGCTGCTTTACCCGATCATTTCACCGCATTTTCCTGGTATGCTCAATCTTCGCTTACTCTGTTTATTTATTAGTTTATAGGTATGTTAAAGAGGTAGTATTGTACATTCGAATTACTAAAGCCCCTAAACATTGCATTTTTTGTAAATCGCTGATGGAGTAATCAAGTTGTATAGGTTTGTTGATTGTATTTGCTTTGAAGTTGCTAACTACGATCTGCGAAGGTTATTCTCTCTGAGATCTTGGCTATTCTACTTTAATACGTTTTGGATTGTTTTACTTTGTAGATAGTGCTTGTTGGAGTTGATTGTTCTGATCCTGTAATGTAGATGCGATTTTTTTGCCGTTACTATTATTAATACGAGGAATTTTTCCGTTAGTGATTATTTGTAAATAGTTTAATGGAGTTTGATGTGTCTAATCATTGTTATAATAGTGATTCGAAGTGCTTTGTTGCTAACTTGGATGGACAAAAATAAGCTAACTATTTCATTTGGGCTTAACTTAGGGTTTCGTTCTTTTTCTTAAAAGGTTTCTGCAGCATGATTTGAGTAAAAACTTGCGTGATTTGTACATTGGCAACATCTATTCTACTTAATTTACTGGCTGAAGGATTTTCACACCCAATGCTACCAATTGAAAACAAAGTAGTGTTGTCAAACCTTCAATCTTGAAGTTCATCAAATAAGAAATTGGATTGTTCATTCAGAAATATTAGATCACTATGTTACTTGTTCCTTTTTTTTCTTCTCAAAGGCATTAGATTATTGTGTGCGCTTTCCAGTTCTCCAGCCAATGCTACATCATTTACTTGATAATGTGAGTCCCCTAGTGGTGTCATGCCAGCTTAGGTACCTTGACTAATCCACTAGGTAACATTCTACACTGAAGCAAATCAGCTCTTTCCAGGTGTTATAACTGGTAGTTTGAACCTGGAATCTTCAGGTTGATACTTCTATGCCTAAACTATTCAGCTATCTTCAGGTGTTATAACTGGTAGTTTGAACCTGGAAGCCTTAATAGCTGTATTCTCTAGGATACTGTTCCGCTAAGAAAATTACAATTATCAGTGAAGCCTTGTGAGATTGATATTATCTTCCATCGATCATAAACAAAAACTTCAGTAGAAGAACTAAGTATTGATATGGAAAATTAGGTAAGGGACCTTGAAAGAAAAAAAAGTAAGTTACTGGAATGACCACAAATATGAAAAGGCATTACTGAGGTCCAAAAGTTAGTTCTAAAATCCCCGGAGTTCAAATATCTGTTTATTATGTTGTTTTCTCTTCTCCAGAGTTCACATATCAGTTTATTATATTGTTTTCTCCTCTTCTCTGGAGTTCACATATCTGTTTATTATGTTGCATTCTCCTCTTCTCCGGAGTTCACATATCTGTTTAGCTTTCTTCTCTTCTATTCGACCGGAAATGATTTCTTAAGTGCATTGCTGACGTGGCTCATAAAAACCCTTTACACTGCTGGTATTTCAGATCTAATCCATATATGATGTCTGAGGAAGCTGCTAGAGATCTCATTCCACTACCTGAAGCTGGGATGAACAATGAGATCCCCAGTAATGGGAGTGTTCCAGCAATAAGGGTTGAGAGCATTGATAAAAATTCAAAAGATAAGGAAAGAGAAAATCCTGCCTTACTGGTTGGACCTTGCCTTAATGGAGACGGTAAGGTGAATACTGGGGCAGAGGTGGGAAATTCTGAAGTGGAATACATAGAATCTGAGAATTTGAATGATGTAGAAGATGTTGACACAAGTCTCAAGGTAATGATTCCTGATATAGTTTGATGTTTCATTTTAGTATTTTGCATCTCGGTTTTGCTTCTTTATATTGGTTTACAAAAGTCTCTTTTCAATGTCTTTGCCTCTCCTTTTTCATTTGTAGACACTGTTGACTGGGCTTGACTCCAAGGACTGGGTTTTAGTCTGTGAGGCACTCAATGACGTTCGGCGTCTGTCCCTATTTCACAAAGAAGCAATGGTTGATATGTTGTAAGTCTTTGTCACCTAGGATATAACTTGAAAGATGTTTGATCATGATGTTCTAGCTGGTTAGACATATCTTTGTGTATGCTCCCCTTTTGTTCTGTCTGGTCTTACTTATGCTTATTACTTAAAATGAGCAGGAGAAATGTGATCTCCCTTGTTGTGAAATCTTTGAAAAATCCGAGAAGTGCTGTTTGTAAGACTGCTATTATGGCATCAGCTGACATTTTCAAAGCATACTGTGACACCATAGTTGACTTGATGGATCCACTGGTAACTTTTCTCTTTTGTGACTTGTGTGACTGCCTTGGCAATATATTTTCACCTAATTTTACCTTGTTCTTGTGCTTATTATGTGACTGTTTCCTTGCTTAGCTTGTACAACTTCTTCTGAAGTCTTCACAAGACAAGCGATTTGTTTGCGAGGCAGCTGAAAAAGCTCTAAAAGCAATGACAATGTGGGTTTCTCCATCGCTGTTGTTACCGAAGTTGCAACCAAATTTGAAACACAGAAATCCTAGAATTCGAGCAAAAGCTTCAAGCTGCTTTTCTCGAAGTGTACCACGTCTGGTGAGAGTTCAAAGTTCTAAAATCTCTTCCTTATGCACCCTGACTTGTGAATTTTAGTAATTACTATTTTCATTCTTACATTTTTTTCCTGCAATTGTTGTTAACGTAGTTTGTTTGTTATTTGCTGACTAATATCTTTTCCCTTGACTGTTTTATAGACAATATCTTGATACAAACTCCACCCTAGGAAACCCTTCTTGAGAGCGTTTTAAGAATTACTTCTTGAGAATGTTTACTAATTACTTTACTGGTTAAAGGAATGGATAGGTAATAATTTGTTTATCTGCTGACTCTGACTAAGATCTTTCCCTTGGCTATGTTTTATTGACAATGCCTTGATGCTGAACTCTACCCTAGTAGGACACCCTTCTTGAGAGCGTTTGAAGAATGAATTTTTCTGATTAAGGAAATGACTAGGTAACAATTTGTCAGTCATTTGAGTATATTAGGAACTTTTACATGGTTTCTCCAATAAGTTTTGTTCACAATGCTATAATTAACCGCTTTCAATACCCTTCTGGTGGTTATTTTATTATTCAGCAGTATAAATTTGTTCTTGTTGAATGAAACAAGAAAGATTACATATTAACGGCCCCTTAACATGGAAACATTTTCTGGCATTTGTGTCTTTTCATGTATGATCATATCACTGAAATGTGAAAGAGGAATAAACTTTGTCCTGTTCTTAGTTTTTGTTTTCTAGCTGGTTGCCCAATTCTCTTTTTACTACTAGATCTGGTCCTTACTAACAGAGTTGCATGTTTTACAGGGAGTAGAGGGAATTAAAGCATATGGAATTGAGAACTTGATCCGAATAGCTGCATCGCAGCTCAGTGAC</genome_strand>
        <mrna_strand>GTCGTTGAAGAGGAGAGTTCAAAATCATTTCGATTTGCTGCTTTACCCGATCATTTCACCGCATTTTCCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTAATCCATATATGATGTCTGAGGAAGCTGCTAGAGATCTCATTCCACTACCTGAAGCTGGGATGAACAATGAGATCCCCAGTAATGGGAGTGTTCCAGCAATAAGGGTTGAGAGCATTGATAAAAATTCAAAAGATAAGGAAAGAGAAAATCCTGCCTTACTGGTTGGACCTTGCCTTAATGGAGACGGTAAGGTGAATACTGGGGCAGAGGTGGGAAATTCTGAAGTGGAATACATAGAATCTGAGAATTTGAATGATGTAGAAGATGTTGACACAAGTCTCAAG.........................................................................................................................ACACTGTTGACTGGGCTTGACTCCNAGGACTGGGTTTTAGTCTGTGAGGCACTCAATGACGTTCGGCGTCTGTCCCTATTTCACAAAGAAGCAATGGTTGATATGTT......................................................................................................................................GAGAAATGTGATCTCCCTTGTTGTGAAATCTTTGAAAAATCCGAGAAGTGCTGTTTGTAAGACTGCTATTATGGCATCAGCTGACATTTTCAAAGCATACTGTGACACCATAGTTGACTTGATGGATCCACTG......................................................................................................CTTGTACAACTTCTTCTGAAGTCTTCACAAGACAAGCGATTTGTTTGCGAGGCAGCTGAAAAAGCTCTAAAAGCAATGACAATGTGGGTTTCTCCATCGCTGTTGTTACCGAAGTTGCAACCAAATTTGAAACACAGAAATCCTAGAATTCGAGCAAAAGCTTCAAGCTGCTTTTCTCGAAGTGTACCACGTCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTAGAGGGAATTAAAGCATATGGAATTGAGAACTTGATCCGAATAGCTGCATCGCAGCTCAATGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E348677" ref_strand="+" ref_description="SGN-E348677 [cTOF-30-L23]">
      <seq>gataaaatcctccattgtttagtaggttaaaatctgcttgtcgttgaagaggagagttcaaaatcatttcgatttgctgctttacccgatcatttcaccgcattttcctgatctaatccatatatgatgtctgaggaagctgctagagatctcattccactacctgaagctgggatgaacaatgagatccccagtaatgggagtgttccagcaataagggttgagagcattgataaaaattcaaaagataaggaaagagaaaatcctgccttactggttggaccttgccttaatggagacggtaaggtgaatactggggcagaggtgggaaattctgaagtggaatacatagaatctgagaatttgaatgatgtagaagatgttgacacaagtctcaagacactgttgactgggcttgactccaaggactgggttttagtctgtgaggcactcaatgacgttcggcgtctgtccctatttcacaaagaagcaatggttgatatgttgagaaatgtgatctcccttgttgtgaaatctttgaaaaaccgagaagtgctgtttgtaagactgctattatggcatcagctgacattttcaaagcatactgtgacaccatagttgacttgatggatccactgcttgtacaacttcttctgaagtcttacaagacaagcgatttgtttgcgaggcagctgaaaagctctaaagcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="41200" stop="38075"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40901" g_stop="40792" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40791" i_stop="39339" i_length="1453">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="39338" g_stop="39050" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="399" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="39049" i_stop="38929" i_length="121">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="38928" g_stop="38822" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="400" r_stop="506" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="38821" i_stop="38688" i_length="134">
            <donor d_prob="0.878" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="38687" g_stop="38555" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="507" r_stop="638" r_length="132" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="38554" i_stop="38453" i_length="102">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.785" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="38452" g_stop="38379" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="639" r_stop="709" r_length="71" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E348677" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E348677" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40901" e_stop="40792"/>
          <exon e_start="39338" e_stop="39050"/>
          <exon e_start="38928" e_stop="38822"/>
          <exon e_start="38687" e_stop="38555"/>
          <exon e_start="38452" e_stop="38379"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATAAAATCCTCCATTGTTTAGTAGGTTAAAATCTGCTTGTCGTTGAAGAGGAGAGTTCAAAATCATTTCGATTTGCTGCTTTACCCGATCATTTCACCGCATTTTCCTGGTATGCTCAATCTTCGCTTACTCTGTTTATTTATTAGTTTATAGGTATGTTAAAGAGGTAGTATTGTACATTCGAATTACTAAAGCCCCTAAACATTGCATTTTTTGTAAATCGCTGATGGAGTAATCAAGTTGTATAGGTTTGTTGATTGTATTTGCTTTGAAGTTGCTAACTACGATCTGCGAAGGTTATTCTCTCTGAGATCTTGGCTATTCTACTTTAATACGTTTTGGATTGTTTTACTTTGTAGATAGTGCTTGTTGGAGTTGATTGTTCTGATCCTGTAATGTAGATGCGATTTTTTTGCCGTTACTATTATTAATACGAGGAATTTTTCCGTTAGTGATTATTTGTAAATAGTTTAATGGAGTTTGATGTGTCTAATCATTGTTATAATAGTGATTCGAAGTGCTTTGTTGCTAACTTGGATGGACAAAAATAAGCTAACTATTTCATTTGGGCTTAACTTAGGGTTTCGTTCTTTTTCTTAAAAGGTTTCTGCAGCATGATTTGAGTAAAAACTTGCGTGATTTGTACATTGGCAACATCTATTCTACTTAATTTACTGGCTGAAGGATTTTCACACCCAATGCTACCAATTGAAAACAAAGTAGTGTTGTCAAACCTTCAATCTTGAAGTTCATCAAATAAGAAATTGGATTGTTCATTCAGAAATATTAGATCACTATGTTACTTGTTCCTTTTTTTTCTTCTCAAAGGCATTAGATTATTGTGTGCGCTTTCCAGTTCTCCAGCCAATGCTACATCATTTACTTGATAATGTGAGTCCCCTAGTGGTGTCATGCCAGCTTAGGTACCTTGACTAATCCACTAGGTAACATTCTACACTGAAGCAAATCAGCTCTTTCCAGGTGTTATAACTGGTAGTTTGAACCTGGAATCTTCAGGTTGATACTTCTATGCCTAAACTATTCAGCTATCTTCAGGTGTTATAACTGGTAGTTTGAACCTGGAAGCCTTAATAGCTGTATTCTCTAGGATACTGTTCCGCTAAGAAAATTACAATTATCAGTGAAGCCTTGTGAGATTGATATTATCTTCCATCGATCATAAACAAAAACTTCAGTAGAAGAACTAAGTATTGATATGGAAAATTAGGTAAGGGACCTTGAAAGAAAAAAAAGTAAGTTACTGGAATGACCACAAATATGAAAAGGCATTACTGAGGTCCAAAAGTTAGTTCTAAAATCCCCGGAGTTCAAATATCTGTTTATTATGTTGTTTTCTCTTCTCCAGAGTTCACATATCAGTTTATTATATTGTTTTCTCCTCTTCTCTGGAGTTCACATATCTGTTTATTATGTTGCATTCTCCTCTTCTCCGGAGTTCACATATCTGTTTAGCTTTCTTCTCTTCTATTCGACCGGAAATGATTTCTTAAGTGCATTGCTGACGTGGCTCATAAAAACCCTTTACACTGCTGGTATTTCAGATCTAATCCATATATGATGTCTGAGGAAGCTGCTAGAGATCTCATTCCACTACCTGAAGCTGGGATGAACAATGAGATCCCCAGTAATGGGAGTGTTCCAGCAATAAGGGTTGAGAGCATTGATAAAAATTCAAAAGATAAGGAAAGAGAAAATCCTGCCTTACTGGTTGGACCTTGCCTTAATGGAGACGGTAAGGTGAATACTGGGGCAGAGGTGGGAAATTCTGAAGTGGAATACATAGAATCTGAGAATTTGAATGATGTAGAAGATGTTGACACAAGTCTCAAGGTAATGATTCCTGATATAGTTTGATGTTTCATTTTAGTATTTTGCATCTCGGTTTTGCTTCTTTATATTGGTTTACAAAAGTCTCTTTTCAATGTCTTTGCCTCTCCTTTTTCATTTGTAGACACTGTTGACTGGGCTTGACTCCAAGGACTGGGTTTTAGTCTGTGAGGCACTCAATGACGTTCGGCGTCTGTCCCTATTTCACAAAGAAGCAATGGTTGATATGTTGTAAGTCTTTGTCACCTAGGATATAACTTGAAAGATGTTTGATCATGATGTTCTAGCTGGTTAGACATATCTTTGTGTATGCTCCCCTTTTGTTCTGTCTGGTCTTACTTATGCTTATTACTTAAAATGAGCAGGAGAAATGTGATCTCCCTTGTTGTGAAATCTTTGAAAAATCCGAGAAGTGCTGTTTGTAAGACTGCTATTATGGCATCAGCTGACATTTTCAAAGCATACTGTGACACCATAGTTGACTTGATGGATCCACTGGTAACTTTTCTCTTTTGTGACTTGTGTGACTGCCTTGGCAATATATTTTCACCTAATTTTACCTTGTTCTTGTGCTTATTATGTGACTGTTTCCTTGCTTAGCTTGTACAACTTCTTCTGAAGTCTTCACAAGACAAGCGATTTGTTTGCGAGGCAGCTGAAAAAGCTCTAAAAGC</genome_strand>
        <mrna_strand>GATAAAATCCTCCATTGTTTAGTAGGTTAAAATCTGCTTGTCGTTGAAGAGGAGAGTTCAAAATCATTTCGATTTGCTGCTTTACCCGATCATTTCACCGCATTTTCCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTAATCCATATATGATGTCTGAGGAAGCTGCTAGAGATCTCATTCCACTACCTGAAGCTGGGATGAACAATGAGATCCCCAGTAATGGGAGTGTTCCAGCAATAAGGGTTGAGAGCATTGATAAAAATTCAAAAGATAAGGAAAGAGAAAATCCTGCCTTACTGGTTGGACCTTGCCTTAATGGAGACGGTAAGGTGAATACTGGGGCAGAGGTGGGAAATTCTGAAGTGGAATACATAGAATCTGAGAATTTGAATGATGTAGAAGATGTTGACACAAGTCTCAAG.........................................................................................................................ACACTGTTGACTGGGCTTGACTCCAAGGACTGGGTTTTAGTCTGTGAGGCACTCAATGACGTTCGGCGTCTGTCCCTATTTCACAAAGAAGCAATGGTTGATATGTT......................................................................................................................................GAGAAATGTGATCTCCCTTGTTGTGAAATCTTTGAAAAA-CCGAGAAGTGCTGTTTGTAAGACTGCTATTATGGCATCAGCTGACATTTTCAAAGCATACTGTGACACCATAGTTGACTTGATGGATCCACTG......................................................................................................CTTGTACAACTTCTTCTGAAGTCTT-ACAAGACAAGCGATTTGTTTGCGAGGCAGCTG-AAAAGCTCT-AAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E687715" ref_strand="+" ref_description="SGN-E687715 [T3_tus_79_J09]">
      <seq>tttttacccgatcatttcaccgcattttcctgatctaatccatatatgatgtctgaggaagctgctagagatctcattccactacctgaagctgggatgaacaatgagatccccagtaatgggagtgttccagcaataagggttgagagcattgataaaaattcaaaagataaggaaagagaaaatcctgccttactggttggaccttgccttaatggagacggtaaggtgaatactggggcagaggtgggaaattctgaagtggaatacatagaatctgagaatttgaatgatttataagatgttgacacaagtctcaagacactgttgactgggcttgactccaaggactgggttttagtctgtgaggcactcaatgacgttcggcgtctgtccctatttcacaaagaagcaatggttgatatgttgagaaatgtgatctcccttgttgtgaaatctttgaaaaatccgagaagtgctgtttgtaaagactgctaatatggcatcagctgacattttcaaaagcataactgtgacaccatagttgacttgatggatccactgcttgtacaacttcttctgaagtcttcacaagacaagcgatttgtttgcgaggcacctgaaaaagctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="41121" stop="38086"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40823" g_stop="40792" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="0.938"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40791" i_stop="39339" i_length="1453">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="39338" g_stop="39050" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="321" r_length="289" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="39049" i_stop="38929" i_length="121">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="38928" g_stop="38822" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="428" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="38821" i_stop="38688" i_length="134">
            <donor d_prob="0.878" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="38687" g_stop="38555" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="564" r_length="136" r_score="0.947"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="38554" i_stop="38453" i_length="102">
            <donor d_prob="0.949" d_score="0.92"/>
            <acceptor a_prob="0.785" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="38452" g_stop="38386" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="565" r_stop="631" r_length="67" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E687715" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E687715" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40823" e_stop="40792"/>
          <exon e_start="39338" e_stop="39050"/>
          <exon e_start="38928" e_stop="38822"/>
          <exon e_start="38687" e_stop="38555"/>
          <exon e_start="38452" e_stop="38386"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTTACCCGATCATTTCACCGCATTTTCCTGGTATGCTCAATCTTCGCTTACTCTGTTTATTTATTAGTTTATAGGTATGTTAAAGAGGTAGTATTGTACATTCGAATTACTAAAGCCCCTAAACATTGCATTTTTTGTAAATCGCTGATGGAGTAATCAAGTTGTATAGGTTTGTTGATTGTATTTGCTTTGAAGTTGCTAACTACGATCTGCGAAGGTTATTCTCTCTGAGATCTTGGCTATTCTACTTTAATACGTTTTGGATTGTTTTACTTTGTAGATAGTGCTTGTTGGAGTTGATTGTTCTGATCCTGTAATGTAGATGCGATTTTTTTGCCGTTACTATTATTAATACGAGGAATTTTTCCGTTAGTGATTATTTGTAAATAGTTTAATGGAGTTTGATGTGTCTAATCATTGTTATAATAGTGATTCGAAGTGCTTTGTTGCTAACTTGGATGGACAAAAATAAGCTAACTATTTCATTTGGGCTTAACTTAGGGTTTCGTTCTTTTTCTTAAAAGGTTTCTGCAGCATGATTTGAGTAAAAACTTGCGTGATTTGTACATTGGCAACATCTATTCTACTTAATTTACTGGCTGAAGGATTTTCACACCCAATGCTACCAATTGAAAACAAAGTAGTGTTGTCAAACCTTCAATCTTGAAGTTCATCAAATAAGAAATTGGATTGTTCATTCAGAAATATTAGATCACTATGTTACTTGTTCCTTTTTTTTCTTCTCAAAGGCATTAGATTATTGTGTGCGCTTTCCAGTTCTCCAGCCAATGCTACATCATTTACTTGATAATGTGAGTCCCCTAGTGGTGTCATGCCAGCTTAGGTACCTTGACTAATCCACTAGGTAACATTCTACACTGAAGCAAATCAGCTCTTTCCAGGTGTTATAACTGGTAGTTTGAACCTGGAATCTTCAGGTTGATACTTCTATGCCTAAACTATTCAGCTATCTTCAGGTGTTATAACTGGTAGTTTGAACCTGGAAGCCTTAATAGCTGTATTCTCTAGGATACTGTTCCGCTAAGAAAATTACAATTATCAGTGAAGCCTTGTGAGATTGATATTATCTTCCATCGATCATAAACAAAAACTTCAGTAGAAGAACTAAGTATTGATATGGAAAATTAGGTAAGGGACCTTGAAAGAAAAAAAAGTAAGTTACTGGAATGACCACAAATATGAAAAGGCATTACTGAGGTCCAAAAGTTAGTTCTAAAATCCCCGGAGTTCAAATATCTGTTTATTATGTTGTTTTCTCTTCTCCAGAGTTCACATATCAGTTTATTATATTGTTTTCTCCTCTTCTCTGGAGTTCACATATCTGTTTATTATGTTGCATTCTCCTCTTCTCCGGAGTTCACATATCTGTTTAGCTTTCTTCTCTTCTATTCGACCGGAAATGATTTCTTAAGTGCATTGCTGACGTGGCTCATAAAAACCCTTTACACTGCTGGTATTTCAGATCTAATCCATATATGATGTCTGAGGAAGCTGCTAGAGATCTCATTCCACTACCTGAAGCTGGGATGAACAATGAGATCCCCAGTAATGGGAGTGTTCCAGCAATAAGGGTTGAGAGCATTGATAAAAATTCAAAAGATAAGGAAAGAGAAAATCCTGCCTTACTGGTTGGACCTTGCCTTAATGGAGACGGTAAGGTGAATACTGGGGCAGAGGTGGGAAATTCTGAAGTGGAATACATAGAATCTGAGAATTTGAATGATGTAGAAGATGTTGACACAAGTCTCAAGGTAATGATTCCTGATATAGTTTGATGTTTCATTTTAGTATTTTGCATCTCGGTTTTGCTTCTTTATATTGGTTTACAAAAGTCTCTTTTCAATGTCTTTGCCTCTCCTTTTTCATTTGTAGACACTGTTGACTGGGCTTGACTCCAAGGACTGGGTTTTAGTCTGTGAGGCACTCAATGACGTTCGGCGTCTGTCCCTATTTCACAAAGAAGCAATGGTTGATATGTTGTAAGTCTTTGTCACCTAGGATATAACTTGAAAGATGTTTGATCATGATGTTCTAGCTGGTTAGACATATCTTTGTGTATGCTCCCCTTTTGTTCTGTCTGGTCTTACTTATGCTTATTACTTAAAATGAGCAGGAGAAATGTGATCTCCCTTGTTGTGAAATCTTTGAAAAATCCGAGAAGTGCTGTTTGT-AAGACTGCTATTATGGCATCAGCTGACATTTTC-AAAGCAT-ACTGTGACACCATAGTTGACTTGATGGATCCACTGGTAACTTTTCTCTTTTGTGACTTGTGTGACTGCCTTGGCAATATATTTTCACCTAATTTTACCTTGTTCTTGTGCTTATTATGTGACTGTTTCCTTGCTTAGCTTGTACAACTTCTTCTGAAGTCTTCACAAGACAAGCGATTTGTTTGCGAGGCAGCTGAAAAAGCTC</genome_strand>
        <mrna_strand>TTTTTACCCGATCATTTCACCGCATTTTCCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTAATCCATATATGATGTCTGAGGAAGCTGCTAGAGATCTCATTCCACTACCTGAAGCTGGGATGAACAATGAGATCCCCAGTAATGGGAGTGTTCCAGCAATAAGGGTTGAGAGCATTGATAAAAATTCAAAAGATAAGGAAAGAGAAAATCCTGCCTTACTGGTTGGACCTTGCCTTAATGGAGACGGTAAGGTGAATACTGGGGCAGAGGTGGGAAATTCTGAAGTGGAATACATAGAATCTGAGAATTTGAATGATTTATAAGATGTTGACACAAGTCTCAAG.........................................................................................................................ACACTGTTGACTGGGCTTGACTCCAAGGACTGGGTTTTAGTCTGTGAGGCACTCAATGACGTTCGGCGTCTGTCCCTATTTCACAAAGAAGCAATGGTTGATATGTT......................................................................................................................................GAGAAATGTGATCTCCCTTGTTGTGAAATCTTTGAAAAATCCGAGAAGTGCTGTTTGTAAAGACTGCTAATATGGCATCAGCTGACATTTTCAAAAGCATAACTGTGACACCATAGTTGACTTGATGGATCCACTG......................................................................................................CTTGTACAACTTCTTCTGAAGTCTTCACAAGACAAGCGATTTGTTTGCGAGGCACCTGAAAAAGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E375974" ref_strand="+" ref_description="SGN-E375974 [TUS-40-I16]">
      <seq>cgtgctgccggcccaattttggtgtgaaatagcgccgtctcattctactgttctcgccggttacaaatatctcttttctactctctctgtctattactcttcactcactatacacataaaatcctccattgtttagtaggttaaaatctgcttgtcgttgaagaggagagttcaaaatcatttcgatttgctgctttacccgatcatttcaccgcattttcctgatctaatccatatatgatgtctgaggaagctgctagagatctcattccactacctgaagctgggatgaacaatgagatccccagtaatgggagtgttccagcaataagggttgagagcattgataaaaattcaaaagataaggaaagagaaaatcctgccttactggttggaccttgccttaatggagacggtaaggtgaatactggggcagaggtgggaaattctgaagtggaatacatagaatctgagaatttgaatgatgtagaagatgttgacacaagtctcaagacactgttgactgggcttgactccaaggactgggttttagtctgtgaggcactcaatgacgttcggcgtctgtccctatttcacaaagaagcaatggttgatatgttgagaaatgtgatctcccttgttgtgaaatctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="41315" stop="38356"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41015" g_stop="40792" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="224" r_length="224" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40791" i_stop="39339" i_length="1453">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="39338" g_stop="39050" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="513" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="39049" i_stop="38929" i_length="121">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="38928" g_stop="38822" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="620" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="38821" i_stop="38688" i_length="134">
            <donor d_prob="0.878" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="38687" g_stop="38656" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="621" r_stop="652" r_length="32" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E375974" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>652</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375974" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41015" e_stop="40792"/>
          <exon e_start="39338" e_stop="39050"/>
          <exon e_start="38928" e_stop="38822"/>
          <exon e_start="38687" e_stop="38656"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTGCTGCCGGCCCAATTTTGGTGTGAAATAGCGCCGTCTCATTCTACTGTTCTCGCCGGTTACAAATATCTCTTTTCTACTCTCTCTGTCTATTACTCTTCACTCACTATACACATAAAATCCTCCATTGTTTAGTAGGTTAAAATCTGCTTGTCGTTGAAGAGGAGAGTTCAAAATCATTTCGATTTGCTGCTTTACCCGATCATTTCACCGCATTTTCCTGGTATGCTCAATCTTCGCTTACTCTGTTTATTTATTAGTTTATAGGTATGTTAAAGAGGTAGTATTGTACATTCGAATTACTAAAGCCCCTAAACATTGCATTTTTTGTAAATCGCTGATGGAGTAATCAAGTTGTATAGGTTTGTTGATTGTATTTGCTTTGAAGTTGCTAACTACGATCTGCGAAGGTTATTCTCTCTGAGATCTTGGCTATTCTACTTTAATACGTTTTGGATTGTTTTACTTTGTAGATAGTGCTTGTTGGAGTTGATTGTTCTGATCCTGTAATGTAGATGCGATTTTTTTGCCGTTACTATTATTAATACGAGGAATTTTTCCGTTAGTGATTATTTGTAAATAGTTTAATGGAGTTTGATGTGTCTAATCATTGTTATAATAGTGATTCGAAGTGCTTTGTTGCTAACTTGGATGGACAAAAATAAGCTAACTATTTCATTTGGGCTTAACTTAGGGTTTCGTTCTTTTTCTTAAAAGGTTTCTGCAGCATGATTTGAGTAAAAACTTGCGTGATTTGTACATTGGCAACATCTATTCTACTTAATTTACTGGCTGAAGGATTTTCACACCCAATGCTACCAATTGAAAACAAAGTAGTGTTGTCAAACCTTCAATCTTGAAGTTCATCAAATAAGAAATTGGATTGTTCATTCAGAAATATTAGATCACTATGTTACTTGTTCCTTTTTTTTCTTCTCAAAGGCATTAGATTATTGTGTGCGCTTTCCAGTTCTCCAGCCAATGCTACATCATTTACTTGATAATGTGAGTCCCCTAGTGGTGTCATGCCAGCTTAGGTACCTTGACTAATCCACTAGGTAACATTCTACACTGAAGCAAATCAGCTCTTTCCAGGTGTTATAACTGGTAGTTTGAACCTGGAATCTTCAGGTTGATACTTCTATGCCTAAACTATTCAGCTATCTTCAGGTGTTATAACTGGTAGTTTGAACCTGGAAGCCTTAATAGCTGTATTCTCTAGGATACTGTTCCGCTAAGAAAATTACAATTATCAGTGAAGCCTTGTGAGATTGATATTATCTTCCATCGATCATAAACAAAAACTTCAGTAGAAGAACTAAGTATTGATATGGAAAATTAGGTAAGGGACCTTGAAAGAAAAAAAAGTAAGTTACTGGAATGACCACAAATATGAAAAGGCATTACTGAGGTCCAAAAGTTAGTTCTAAAATCCCCGGAGTTCAAATATCTGTTTATTATGTTGTTTTCTCTTCTCCAGAGTTCACATATCAGTTTATTATATTGTTTTCTCCTCTTCTCTGGAGTTCACATATCTGTTTATTATGTTGCATTCTCCTCTTCTCCGGAGTTCACATATCTGTTTAGCTTTCTTCTCTTCTATTCGACCGGAAATGATTTCTTAAGTGCATTGCTGACGTGGCTCATAAAAACCCTTTACACTGCTGGTATTTCAGATCTAATCCATATATGATGTCTGAGGAAGCTGCTAGAGATCTCATTCCACTACCTGAAGCTGGGATGAACAATGAGATCCCCAGTAATGGGAGTGTTCCAGCAATAAGGGTTGAGAGCATTGATAAAAATTCAAAAGATAAGGAAAGAGAAAATCCTGCCTTACTGGTTGGACCTTGCCTTAATGGAGACGGTAAGGTGAATACTGGGGCAGAGGTGGGAAATTCTGAAGTGGAATACATAGAATCTGAGAATTTGAATGATGTAGAAGATGTTGACACAAGTCTCAAGGTAATGATTCCTGATATAGTTTGATGTTTCATTTTAGTATTTTGCATCTCGGTTTTGCTTCTTTATATTGGTTTACAAAAGTCTCTTTTCAATGTCTTTGCCTCTCCTTTTTCATTTGTAGACACTGTTGACTGGGCTTGACTCCAAGGACTGGGTTTTAGTCTGTGAGGCACTCAATGACGTTCGGCGTCTGTCCCTATTTCACAAAGAAGCAATGGTTGATATGTTGTAAGTCTTTGTCACCTAGGATATAACTTGAAAGATGTTTGATCATGATGTTCTAGCTGGTTAGACATATCTTTGTGTATGCTCCCCTTTTGTTCTGTCTGGTCTTACTTATGCTTATTACTTAAAATGAGCAGGAGAAATGTGATCTCCCTTGTTGTGAAATCTT</genome_strand>
        <mrna_strand>CGTGCTGCCGGCCCAATTTTGGTGTGAAATAGCGCCGTCTCATTCTACTGTTCTCGCCGGTTACAAATATCTCTTTTCTACTCTCTCTGTCTATTACTCTTCACTCACTATACACATAAAATCCTCCATTGTTTAGTAGGTTAAAATCTGCTTGTCGTTGAAGAGGAGAGTTCAAAATCATTTCGATTTGCTGCTTTACCCGATCATTTCACCGCATTTTCCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTAATCCATATATGATGTCTGAGGAAGCTGCTAGAGATCTCATTCCACTACCTGAAGCTGGGATGAACAATGAGATCCCCAGTAATGGGAGTGTTCCAGCAATAAGGGTTGAGAGCATTGATAAAAATTCAAAAGATAAGGAAAGAGAAAATCCTGCCTTACTGGTTGGACCTTGCCTTAATGGAGACGGTAAGGTGAATACTGGGGCAGAGGTGGGAAATTCTGAAGTGGAATACATAGAATCTGAGAATTTGAATGATGTAGAAGATGTTGACACAAGTCTCAAG.........................................................................................................................ACACTGTTGACTGGGCTTGACTCCAAGGACTGGGTTTTAGTCTGTGAGGCACTCAATGACGTTCGGCGTCTGTCCCTATTTCACAAAGAAGCAATGGTTGATATGTT......................................................................................................................................GAGAAATGTGATCTCCCTTGTTGTGAAATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E324984" ref_strand="+" ref_description="SGN-E324984 [cTOC-11-H10]">
      <seq>tcgttgaagaggagagttcaaaatcatttcgatttgctgctttacccgatcatttcaccgcattttcctgatctaatccatatatgatgtctgaggaagctgctagagatctcattccactacctgaagctgggatgaacaatgagatccccagtaatgggagtgttccagcaataagggttgagagcattgataaaaattcaaaagataaggaaagagaaaatcctgccttactggttggaccttgccttaatggagacggtaaggtgaatactggggcagaggtgggaaattctgaagtggaatacatagaatctgagaatttgaatgatgtagaagatgttgacacaagtctcaagacactgttgactgggcttgactccaaggactgggttttagtctgtgaggcactcaatgacgttcggcgtctgtccctatttcacaaagaagcaatggttgatatgttgagaaatgtgatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="41161" stop="38521"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40861" g_stop="40792" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="70" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40791" i_stop="39339" i_length="1453">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="39338" g_stop="39050" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="359" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="39049" i_stop="38929" i_length="121">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="38928" g_stop="38822" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="360" r_stop="466" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="38821" i_stop="38688" i_length="134">
            <donor d_prob="0.878" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="38687" g_stop="38675" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="479" r_length="13" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E324984" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E324984" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40861" e_stop="40792"/>
          <exon e_start="39338" e_stop="39050"/>
          <exon e_start="38928" e_stop="38822"/>
          <exon e_start="38687" e_stop="38675"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGTTGAAGAGGAGAGTTCAAAATCATTTCGATTTGCTGCTTTACCCGATCATTTCACCGCATTTTCCTGGTATGCTCAATCTTCGCTTACTCTGTTTATTTATTAGTTTATAGGTATGTTAAAGAGGTAGTATTGTACATTCGAATTACTAAAGCCCCTAAACATTGCATTTTTTGTAAATCGCTGATGGAGTAATCAAGTTGTATAGGTTTGTTGATTGTATTTGCTTTGAAGTTGCTAACTACGATCTGCGAAGGTTATTCTCTCTGAGATCTTGGCTATTCTACTTTAATACGTTTTGGATTGTTTTACTTTGTAGATAGTGCTTGTTGGAGTTGATTGTTCTGATCCTGTAATGTAGATGCGATTTTTTTGCCGTTACTATTATTAATACGAGGAATTTTTCCGTTAGTGATTATTTGTAAATAGTTTAATGGAGTTTGATGTGTCTAATCATTGTTATAATAGTGATTCGAAGTGCTTTGTTGCTAACTTGGATGGACAAAAATAAGCTAACTATTTCATTTGGGCTTAACTTAGGGTTTCGTTCTTTTTCTTAAAAGGTTTCTGCAGCATGATTTGAGTAAAAACTTGCGTGATTTGTACATTGGCAACATCTATTCTACTTAATTTACTGGCTGAAGGATTTTCACACCCAATGCTACCAATTGAAAACAAAGTAGTGTTGTCAAACCTTCAATCTTGAAGTTCATCAAATAAGAAATTGGATTGTTCATTCAGAAATATTAGATCACTATGTTACTTGTTCCTTTTTTTTCTTCTCAAAGGCATTAGATTATTGTGTGCGCTTTCCAGTTCTCCAGCCAATGCTACATCATTTACTTGATAATGTGAGTCCCCTAGTGGTGTCATGCCAGCTTAGGTACCTTGACTAATCCACTAGGTAACATTCTACACTGAAGCAAATCAGCTCTTTCCAGGTGTTATAACTGGTAGTTTGAACCTGGAATCTTCAGGTTGATACTTCTATGCCTAAACTATTCAGCTATCTTCAGGTGTTATAACTGGTAGTTTGAACCTGGAAGCCTTAATAGCTGTATTCTCTAGGATACTGTTCCGCTAAGAAAATTACAATTATCAGTGAAGCCTTGTGAGATTGATATTATCTTCCATCGATCATAAACAAAAACTTCAGTAGAAGAACTAAGTATTGATATGGAAAATTAGGTAAGGGACCTTGAAAGAAAAAAAAGTAAGTTACTGGAATGACCACAAATATGAAAAGGCATTACTGAGGTCCAAAAGTTAGTTCTAAAATCCCCGGAGTTCAAATATCTGTTTATTATGTTGTTTTCTCTTCTCCAGAGTTCACATATCAGTTTATTATATTGTTTTCTCCTCTTCTCTGGAGTTCACATATCTGTTTATTATGTTGCATTCTCCTCTTCTCCGGAGTTCACATATCTGTTTAGCTTTCTTCTCTTCTATTCGACCGGAAATGATTTCTTAAGTGCATTGCTGACGTGGCTCATAAAAACCCTTTACACTGCTGGTATTTCAGATCTAATCCATATATGATGTCTGAGGAAGCTGCTAGAGATCTCATTCCACTACCTGAAGCTGGGATGAACAATGAGATCCCCAGTAATGGGAGTGTTCCAGCAATAAGGGTTGAGAGCATTGATAAAAATTCAAAAGATAAGGAAAGAGAAAATCCTGCCTTACTGGTTGGACCTTGCCTTAATGGAGACGGTAAGGTGAATACTGGGGCAGAGGTGGGAAATTCTGAAGTGGAATACATAGAATCTGAGAATTTGAATGATGTAGAAGATGTTGACACAAGTCTCAAGGTAATGATTCCTGATATAGTTTGATGTTTCATTTTAGTATTTTGCATCTCGGTTTTGCTTCTTTATATTGGTTTACAAAAGTCTCTTTTCAATGTCTTTGCCTCTCCTTTTTCATTTGTAGACACTGTTGACTGGGCTTGACTCCAAGGACTGGGTTTTAGTCTGTGAGGCACTCAATGACGTTCGGCGTCTGTCCCTATTTCACAAAGAAGCAATGGTTGATATGTTGTAAGTCTTTGTCACCTAGGATATAACTTGAAAGATGTTTGATCATGATGTTCTAGCTGGTTAGACATATCTTTGTGTATGCTCCCCTTTTGTTCTGTCTGGTCTTACTTATGCTTATTACTTAAAATGAGCAGGAGAAATGTGATC</genome_strand>
        <mrna_strand>TCGTTGAAGAGGAGAGTTCAAAATCATTTCGATTTGCTGCTTTACCCGATCATTTCACCGCATTTTCCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTAATCCATATATGATGTCTGAGGAAGCTGCTAGAGATCTCATTCCACTACCTGAAGCTGGGATGAACAATGAGATCCCCAGTAATGGGAGTGTTCCAGCAATAAGGGTTGAGAGCATTGATAAAAATTCAAAAGATAAGGAAAGAGAAAATCCTGCCTTACTGGTTGGACCTTGCCTTAATGGAGACGGTAAGGTGAATACTGGGGCAGAGGTGGGAAATTCTGAAGTGGAATACATAGAATCTGAGAATTTGAATGATGTAGAAGATGTTGACACAAGTCTCAAG.........................................................................................................................ACACTGTTGACTGGGCTTGACTCCAAGGACTGGGTTTTAGTCTGTGAGGCACTCAATGACGTTCGGCGTCTGTCCCTATTTCACAAAGAAGCAATGGTTGATATGTT......................................................................................................................................GAGAAATGTGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E323625" ref_strand="+" ref_description="SGN-E323625 [cTOC-2-J22]">
      <seq>cgtgctgccggcccaattttggtgtgaaatagcgccgtctcattctactgttctcgccggttacaaatatctcttttctactctctctgtctattactcttcactcactatacacataaaatcctccattgtttagtaggttaaaatctgcttgtcgttgaagaggagagttcaaaatcatttcgatttgctgctttacccgatcatttcaccgcattttcctgatctaatccatatatgatgtctgaggaagctgctagagatctcattccactacctgaagctgggatgaacaatgagatccccagtaatgggagtgttccagcaataagggttgagagcattgataaaaattcaaaagataaggaaagagaaaatcctgccttactggttggaccttgccttaatggagacggtaaggtgaatactggggcagaggtgggaaattctgaagtggaatacatagaatctgagaatttgaatgatgtagaagatgttgacacaagtctcaagacactgttgactgggcttgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="41315" stop="38608"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41015" g_stop="40792" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="224" r_length="224" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40791" i_stop="39339" i_length="1453">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="39338" g_stop="39050" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="513" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="39049" i_stop="38929" i_length="121">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="38928" g_stop="38908" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="534" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E323625" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E323625" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41015" e_stop="40792"/>
          <exon e_start="39338" e_stop="39050"/>
          <exon e_start="38928" e_stop="38908"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTGCTGCCGGCCCAATTTTGGTGTGAAATAGCGCCGTCTCATTCTACTGTTCTCGCCGGTTACAAATATCTCTTTTCTACTCTCTCTGTCTATTACTCTTCACTCACTATACACATAAAATCCTCCATTGTTTAGTAGGTTAAAATCTGCTTGTCGTTGAAGAGGAGAGTTCAAAATCATTTCGATTTGCTGCTTTACCCGATCATTTCACCGCATTTTCCTGGTATGCTCAATCTTCGCTTACTCTGTTTATTTATTAGTTTATAGGTATGTTAAAGAGGTAGTATTGTACATTCGAATTACTAAAGCCCCTAAACATTGCATTTTTTGTAAATCGCTGATGGAGTAATCAAGTTGTATAGGTTTGTTGATTGTATTTGCTTTGAAGTTGCTAACTACGATCTGCGAAGGTTATTCTCTCTGAGATCTTGGCTATTCTACTTTAATACGTTTTGGATTGTTTTACTTTGTAGATAGTGCTTGTTGGAGTTGATTGTTCTGATCCTGTAATGTAGATGCGATTTTTTTGCCGTTACTATTATTAATACGAGGAATTTTTCCGTTAGTGATTATTTGTAAATAGTTTAATGGAGTTTGATGTGTCTAATCATTGTTATAATAGTGATTCGAAGTGCTTTGTTGCTAACTTGGATGGACAAAAATAAGCTAACTATTTCATTTGGGCTTAACTTAGGGTTTCGTTCTTTTTCTTAAAAGGTTTCTGCAGCATGATTTGAGTAAAAACTTGCGTGATTTGTACATTGGCAACATCTATTCTACTTAATTTACTGGCTGAAGGATTTTCACACCCAATGCTACCAATTGAAAACAAAGTAGTGTTGTCAAACCTTCAATCTTGAAGTTCATCAAATAAGAAATTGGATTGTTCATTCAGAAATATTAGATCACTATGTTACTTGTTCCTTTTTTTTCTTCTCAAAGGCATTAGATTATTGTGTGCGCTTTCCAGTTCTCCAGCCAATGCTACATCATTTACTTGATAATGTGAGTCCCCTAGTGGTGTCATGCCAGCTTAGGTACCTTGACTAATCCACTAGGTAACATTCTACACTGAAGCAAATCAGCTCTTTCCAGGTGTTATAACTGGTAGTTTGAACCTGGAATCTTCAGGTTGATACTTCTATGCCTAAACTATTCAGCTATCTTCAGGTGTTATAACTGGTAGTTTGAACCTGGAAGCCTTAATAGCTGTATTCTCTAGGATACTGTTCCGCTAAGAAAATTACAATTATCAGTGAAGCCTTGTGAGATTGATATTATCTTCCATCGATCATAAACAAAAACTTCAGTAGAAGAACTAAGTATTGATATGGAAAATTAGGTAAGGGACCTTGAAAGAAAAAAAAGTAAGTTACTGGAATGACCACAAATATGAAAAGGCATTACTGAGGTCCAAAAGTTAGTTCTAAAATCCCCGGAGTTCAAATATCTGTTTATTATGTTGTTTTCTCTTCTCCAGAGTTCACATATCAGTTTATTATATTGTTTTCTCCTCTTCTCTGGAGTTCACATATCTGTTTATTATGTTGCATTCTCCTCTTCTCCGGAGTTCACATATCTGTTTAGCTTTCTTCTCTTCTATTCGACCGGAAATGATTTCTTAAGTGCATTGCTGACGTGGCTCATAAAAACCCTTTACACTGCTGGTATTTCAGATCTAATCCATATATGATGTCTGAGGAAGCTGCTAGAGATCTCATTCCACTACCTGAAGCTGGGATGAACAATGAGATCCCCAGTAATGGGAGTGTTCCAGCAATAAGGGTTGAGAGCATTGATAAAAATTCAAAAGATAAGGAAAGAGAAAATCCTGCCTTACTGGTTGGACCTTGCCTTAATGGAGACGGTAAGGTGAATACTGGGGCAGAGGTGGGAAATTCTGAAGTGGAATACATAGAATCTGAGAATTTGAATGATGTAGAAGATGTTGACACAAGTCTCAAGGTAATGATTCCTGATATAGTTTGATGTTTCATTTTAGTATTTTGCATCTCGGTTTTGCTTCTTTATATTGGTTTACAAAAGTCTCTTTTCAATGTCTTTGCCTCTCCTTTTTCATTTGTAGACACTGTTGACTGGGCTTGAC</genome_strand>
        <mrna_strand>CGTGCTGCCGGCCCAATTTTGGTGTGAAATAGCGCCGTCTCATTCTACTGTTCTCGCCGGTTACAAATATCTCTTTTCTACTCTCTCTGTCTATTACTCTTCACTCACTATACACATAAAATCCTCCATTGTTTAGTAGGTTAAAATCTGCTTGTCGTTGAAGAGGAGAGTTCAAAATCATTTCGATTTGCTGCTTTACCCGATCATTTCACCGCATTTTCCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTAATCCATATATGATGTCTGAGGAAGCTGCTAGAGATCTCATTCCACTACCTGAAGCTGGGATGAACAATGAGATCCCCAGTAATGGGAGTGTTCCAGCAATAAGGGTTGAGAGCATTGATAAAAATTCAAAAGATAAGGAAAGAGAAAATCCTGCCTTACTGGTTGGACCTTGCCTTAATGGAGACGGTAAGGTGAATACTGGGGCAGAGGTGGGAAATTCTGAAGTGGAATACATAGAATCTGAGAATTTGAATGATGTAGAAGATGTTGACACAAGTCTCAAG.........................................................................................................................ACACTGTTGACTGGGCTTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E319500" ref_strand="+" ref_description="SGN-E319500 [cTOB-15-K9]">
      <seq>aattttggtgtgaaatagcgccgtctcattctactgttctcgccggttacaaatatctcttttctactctctctgtctattactcttcactcactatacacataaaatcctccattgtttagtaggttaaaatctgcttgtcgttgaagaggagagttcaaaatcatttcgatttgctgctttacccgatcatttcaccgcattttcctgatctaatccatatatgatgtctgaggaagctgctagagatctcattccactacctgaagctgggatgaacaatgagatccccagtaatgggagtgttccagcaataagggttgagagcattgataaaaattcaaaagataaggaaagagaaaatcctgccttactggttggaccttgccttaatggagacggtaaggtgaatactggggcagaggtgggaaattctgaagtggaatacatagaatctgagaatttgaatgatgtagaagatgttgacacaagtctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="41301" stop="38753"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41001" g_stop="40792" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="210" r_length="210" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40791" i_stop="39339" i_length="1453">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="39338" g_stop="39053" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="496" r_length="286" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E319500" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E319500" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41001" e_stop="40792"/>
          <exon e_start="39338" e_stop="39053"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTGGTGTGAAATAGCGCCGTCTCATTCTACTGTTCTCGCCGGTTACAAATATCTCTTTTCTACTCTCTCTGTCTATTACTCTTCACTCACTATACACATAAAATCCTCCATTGTTTAGTAGGTTAAAATCTGCTTGTCGTTGAAGAGGAGAGTTCAAAATCATTTCGATTTGCTGCTTTACCCGATCATTTCACCGCATTTTCCTGGTATGCTCAATCTTCGCTTACTCTGTTTATTTATTAGTTTATAGGTATGTTAAAGAGGTAGTATTGTACATTCGAATTACTAAAGCCCCTAAACATTGCATTTTTTGTAAATCGCTGATGGAGTAATCAAGTTGTATAGGTTTGTTGATTGTATTTGCTTTGAAGTTGCTAACTACGATCTGCGAAGGTTATTCTCTCTGAGATCTTGGCTATTCTACTTTAATACGTTTTGGATTGTTTTACTTTGTAGATAGTGCTTGTTGGAGTTGATTGTTCTGATCCTGTAATGTAGATGCGATTTTTTTGCCGTTACTATTATTAATACGAGGAATTTTTCCGTTAGTGATTATTTGTAAATAGTTTAATGGAGTTTGATGTGTCTAATCATTGTTATAATAGTGATTCGAAGTGCTTTGTTGCTAACTTGGATGGACAAAAATAAGCTAACTATTTCATTTGGGCTTAACTTAGGGTTTCGTTCTTTTTCTTAAAAGGTTTCTGCAGCATGATTTGAGTAAAAACTTGCGTGATTTGTACATTGGCAACATCTATTCTACTTAATTTACTGGCTGAAGGATTTTCACACCCAATGCTACCAATTGAAAACAAAGTAGTGTTGTCAAACCTTCAATCTTGAAGTTCATCAAATAAGAAATTGGATTGTTCATTCAGAAATATTAGATCACTATGTTACTTGTTCCTTTTTTTTCTTCTCAAAGGCATTAGATTATTGTGTGCGCTTTCCAGTTCTCCAGCCAATGCTACATCATTTACTTGATAATGTGAGTCCCCTAGTGGTGTCATGCCAGCTTAGGTACCTTGACTAATCCACTAGGTAACATTCTACACTGAAGCAAATCAGCTCTTTCCAGGTGTTATAACTGGTAGTTTGAACCTGGAATCTTCAGGTTGATACTTCTATGCCTAAACTATTCAGCTATCTTCAGGTGTTATAACTGGTAGTTTGAACCTGGAAGCCTTAATAGCTGTATTCTCTAGGATACTGTTCCGCTAAGAAAATTACAATTATCAGTGAAGCCTTGTGAGATTGATATTATCTTCCATCGATCATAAACAAAAACTTCAGTAGAAGAACTAAGTATTGATATGGAAAATTAGGTAAGGGACCTTGAAAGAAAAAAAAGTAAGTTACTGGAATGACCACAAATATGAAAAGGCATTACTGAGGTCCAAAAGTTAGTTCTAAAATCCCCGGAGTTCAAATATCTGTTTATTATGTTGTTTTCTCTTCTCCAGAGTTCACATATCAGTTTATTATATTGTTTTCTCCTCTTCTCTGGAGTTCACATATCTGTTTATTATGTTGCATTCTCCTCTTCTCCGGAGTTCACATATCTGTTTAGCTTTCTTCTCTTCTATTCGACCGGAAATGATTTCTTAAGTGCATTGCTGACGTGGCTCATAAAAACCCTTTACACTGCTGGTATTTCAGATCTAATCCATATATGATGTCTGAGGAAGCTGCTAGAGATCTCATTCCACTACCTGAAGCTGGGATGAACAATGAGATCCCCAGTAATGGGAGTGTTCCAGCAATAAGGGTTGAGAGCATTGATAAAAATTCAAAAGATAAGGAAAGAGAAAATCCTGCCTTACTGGTTGGACCTTGCCTTAATGGAGACGGTAAGGTGAATACTGGGGCAGAGGTGGGAAATTCTGAAGTGGAATACATAGAATCTGAGAATTTGAATGATGTAGAAGATGTTGACACAAGTCTC</genome_strand>
        <mrna_strand>AATTTTGGTGTGAAATAGCGCCGTCTCATTCTACTGTTCTCGCCGGTTACAAATATCTCTTTTCTACTCTCTCTGTCTATTACTCTTCACTCACTATACACATAAAATCCTCCATTGTTTAGTAGGTTAAAATCTGCTTGTCGTTGAAGAGGAGAGTTCAAAATCATTTCGATTTGCTGCTTTACCCGATCATTTCACCGCATTTTCCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTAATCCATATATGATGTCTGAGGAAGCTGCTAGAGATCTCATTCCACTACCTGAAGCTGGGATGAACAATGAGATCCCCAGTAATGGGAGTGTTCCAGCAATAAGGGTTGAGAGCATTGATAAAAATTCAAAAGATAAGGAAAGAGAAAATCCTGCCTTACTGGTTGGACCTTGCCTTAATGGAGACGGTAAGGTGAATACTGGGGCAGAGGTGGGAAATTCTGAAGTGGAATACATAGAATCTGAGAATTTGAATGATGTAGAAGATGTTGACACAAGTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E745450" ref_strand="+" ref_description="SGN-E745450 [GI|47105628]">
      <seq>gagtcgcaaaataaacttacaaaacagcacatatatatagagacaaaatcacataatacgccctcgccggaatcttattttcactgtcgccggccgttaaaactttttttttctagttcggaggtcaaataattaacctccgatcggaagaagtagttattctaactgcttctatttaatctgaaaacgggaaaacccctgagctggttaaggtggatttcgtgatgggattttgtatttgtcctttggaaactcctgctagattactgtggagtactagtttcttccgccacaagcttatgctcttctaaaacttagtcaactctcttttttcatacacatccctgctaaaaaagaagaactctgtgctggagtttttgttttcctttttctgtttcgccggaaacatataaataatcttctgtgtgtaaataggcgattttccagatagttgaaaatatgggatctgggcatatatttttcgacccgtcgtcgtgtcacggcaacatgctgttccttgggagcggagatcctgttttccgaggaccaagatcgacgatgatgaagatggaggactcctcgaagaggcgacccttctttagctcgccggaggatctatatgacgaggaatactacgacgagcagtcaccggagaagaagcgccgtctcactcctgagcaggtgcacttgttggagaagagctttgagacagaaaacaagctggagcccgagcgcaaaacccagctggcctaaaagctggggctgcagcccagacaggtggctgtatggttccaaaaccgccgtgcccggtggaagaccaagcagctcgagagggattatgatcagctcaaatcctcttatgactcccttctctctgattttgactccgttcgcaaagataacgataagctcaaatctgaggttgtttcattgatggaaaagttacaggggaaagtggttggaggagcagggggaaatgaaaaatctgacatcttggaggtggatgctatgacgatccttcaagtgaaggtgaaggctggggaccggttgagcagtggcagtggtgggagcgcggtggtagatgagcatagttcacagctggtggacagtggggactcatattttcacactgatcatgaggagtatccagggcctggaggatgcaatgttcctccacccatggatggtttacaatcggaggaagatgatggtagtgatgatcatggcagttgccatggctacttctctaacgtctttgtggcagaagagcagcaccatgaacaaggagaagagcctattggatggttctggtcttaattgaattttagaatattatattacagtttttcttatctacgcgcgctttgtatgatgaaataagtgtcgtaattccaacttcttatttaaacatctattaatatgcttttgcagcttttattctcttgatttagcaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="48253" stop="44076"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47954" g_stop="47411" g_length="544"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="544" r_length="544" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47410" i_stop="46861" i_length="550">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46860" g_stop="46724" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="681" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46723" i_stop="46276" i_length="448">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46275" g_stop="46036" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="682" r_stop="921" r_length="240" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46035" i_stop="44906" i_length="1130">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44905" g_stop="44377" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="922" r_stop="1450" r_length="529" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1453" polyA_stop="1472"/>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E745450" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1450</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E745450" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47954" e_stop="47411"/>
          <exon e_start="46860" e_stop="46724"/>
          <exon e_start="46275" e_stop="46036"/>
          <exon e_start="44905" e_stop="44377"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTCGCAAAATAAACTTACAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAGGTATTCTCTAATCATTATGTTCTCTATTCCAATTACTTATATTACTATGAAAATATAATTTAAGAACTTTTTTGATGACTCAATTCCACTATTAAAATTGAAAGTAAAGTATGTATATGATATGAGTAACACTATCACTAGAAAGTGAAATTCGTCTTGATCTGATTTAATTTTTTTGAATGATGTAAATTTTATTATTCAAATTTACAACCAAAACAAGTATAGAAATATTTTGTCCAAGTTAATTTATTCTGAATCGTACAAGATGAAACGAAGCGGTTAACTTGTAGGGTAACCTGCGATAGATGATTTATAATTTCAGTGTACGAAGAGGTTAAGATATACGTAGATCCTTCGTACATATTTTTATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTTTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCATGTAAGTTCTAAGGGTGGCCTTTTATACTATTCTATTTTGAAGCTTGACTTATATTGATTGATACAGGACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAGGTTAGCATCCTGTTCCTCCTTTATCTACCCAAAAATATAAATTAAGTAAATGCGTTTTTTTAATAGTTCGATGGAGTAGTTATCAATTCAACATACTGTGACATATATCTCCTAGCTATCAAGATAGTTAAATTTTTTGGTTCAAATCTCACCATCACATATTTTTGGCAATTGGCCACTACATGTGAAACGATTTGTTTAGTCAAATTATAATTAAGTAACTAAAGAAGATTCCCTCTAAAGTGATTTAAGTTTTTAATTATATTGGAACATATTCACCACTATAGCATCAAATTCTTCACAATATCTACCTTTAAACCCTGAAAAGAAGAGAATTTCTTTTTTATCAACGAGCGTTTTCTTTAAGCAAAATTTTATAATTTTGTGGGATTCGATTACTTGCTGAGCAATAAGTGCATGTCCTGCGTTGTTGGGTACGTAAATGAAGGTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAAAGATAACGATAAGCTCAAATCTGAGGTATAACCATATAGTAATAGTGTTGTGATCATTTTATTTGCTTAGATTCTATTATACTTTGTACCAACCTCTTAACATCGATTTTTCTGGTCGATTTTTGGCATATCTATTAATACTATGTCCTTAAGGCCTTAGCTTTTGCAATACTCTATGAGAAAGAATTAACAAATCTTGGATAACACACCTGTCTTGCAACGATTTGATCAATGACAAAAAGCCGCCTTTCTTGTAACACTGGGGAGTCGGATATATATGTAGAATAATATGATGCCTTACTGAATAAAAACTAGCTAGGAGAGAGTCTATGATAATTTTTTTGTAGTATATAGTAGAATATTAAGATATGTTTGTTGACGAAATTTGTCGGCGAAGTTGGTAATTGGTAGAAATTTTAATCTGACTTTTAATTTGAGGTCATATTCTGTGTAACACCTGGCCATCAATATTAGTAGTGGGGAACCTCACAAACAATATTCTTCCTCACCTAGAATAGAAAATTATATCTGTCAATGTCCTTCTGAGTCATCTTGCATCAGAGTCAAATAAATAAAGTAGCATCTGTTCTAACCCCCCCACTTTCAATGTTTTTTTCTATTACTTGGATTTCAATTTCAAAAAAAGCGAATATACTTTTGATATATTGGGAAAACTTGCTTTAAAATATGCGTAGTGATGAAGACCTTACTATATAGATAGTGGATGTATCACTATCAGAGTTACGCTACTGTTATTTCTTAGTAAACTTTTACTAATTTATTCTTTTGCTTTTATTTTGCACCTTCGTTTTTTTAAAAGTGATGTAATAATAGGGTTATCAACAGCATATTTTTTTTTTTTACAATATTACGCTAAGTTGACTTATAACAATTGGCAACTCTTCATAATACGTCAAAGAGTTGGTATACATTGTAAGACTTGCGCATTTACGTCACACATCAAATCAAATTTTATATATAAGTTTATCACAACTTATTGTATAGTAGGTACACCTGACTTGGCTTGTATTCGAGGTTGCTAATCCCACTAAATGTGATTTTATCTTTTTAGCTTACATGATAGCGTGCAAGTAATTAAGTTGTTGTATATAGTAATAGATTTGAAACTATTTTGTTAATTGGGGAAAAATGCAGGTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTTATTCTCTTGATTTA</genome_strand>
        <mrna_strand>GAGTCGCAAAATAAACTTACAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCTAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAAAGATAACGATAAGCTCAAATCTGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGGGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTTCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTTATTCTCTTGATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E224406" ref_strand="+" ref_description="SGN-E224406 [cLEL-27-K5](-)">
      <seq>gtggggactcatattttcacactgatcatgaggagtatccagggcctggaggatgcaatgttcctccacccatggatggtttacaatcggaggaagatgatggtagtgatgatcatggcagttgccatggctacttctctaacgtctttgtggcagaagagcagcaccatgaacaaggagaagagcctattggatggttctggtcttaattgaattttagaatattatattacagtttttcttatctacgcgcgctttgtatgatgaaataagtgtcgtaattccaacttcttatttaaacatctattaatatgcttttgcagcttttattctcttgatttaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="45018" stop="44077"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44718" g_stop="44377" g_length="342"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="342" r_length="342" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="343" polyA_stop="361"/>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E224406" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>342</cumulative_length_of_scored_exons>
        <coverage percentage="0.947" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E224406" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44718" e_stop="44377"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTTATTCTCTTGATTTA</genome_strand>
        <mrna_strand>GTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTTATTCTCTTGATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E219978" ref_strand="+" ref_description="SGN-E219978 [cLEL-24-E16](-)">
      <seq>agggggaaatgaaaaatctgacatcttggaggtggatgctatgacgatccttcaagtgaaggtgaaggctgaggaccggttgagcagtggcagtggtgggagcgcggtggtagatgagcatagtccacagctggtggacagtggggactcatattttcacactgatcatgaggagtatccagggcctggaggatgcaatgttcctccacccatggatggtttacaatcggaggaagatgatggtagtgatgatcatggcagttgccatggctacttctctaacgtctttgtggcagaagagcagcaccatgaacaaggagaagagcctattggatggttctggtcttaattgaattttagaatattatattacagtttttcttatctacgcgcgctttgtatgatgaaataagtgtcgtaattccaacttcttatttaaacatctattaatatgcttttgcagcttttattctcttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="45158" stop="44081"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44858" g_stop="44382" g_length="477"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="477" r_length="477" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="478" polyA_stop="493"/>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E219978" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E219978" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44858" e_stop="44382"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTTATTCTCTTG</genome_strand>
        <mrna_strand>AGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTTATTCTCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E219738" ref_strand="+" ref_description="SGN-E219738 [cLEL-24-E16](-)">
      <seq>agcatagtccacagctggtggacagtggggactcatattttcacactgatcatgaggagtatccagggcctggaggatgcaatgttcctccacccatggatggtttacaatcggaggaagatgatggtagtgatgatcatggcagttgccatggctacttctctaacgtctttgtggcagaagagcagcaccatgaacaaggagaagagcctattggatggttctggtcttaattgaattttagaatattatattacagtttttcttatctacgcgcgctttgtatgatgaaataagtgtcgtaattccaacttcttatttaaacatctattaatatgcttttgcagcttttattctcttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="45042" stop="44081"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44742" g_stop="44382" g_length="361"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="361" r_length="361" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="362" polyA_stop="377"/>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E219738" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>361</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E219738" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44742" e_stop="44382"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTTATTCTCTTG</genome_strand>
        <mrna_strand>AGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTTATTCTCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E699978" ref_strand="+" ref_description="SGN-E699978 [FA11DA12]">
      <seq>gctgttccttgggagcggagatcctgttttccgaggaccaagatcgacgatgatgaagatggaggactcctcgaagaggcgacccttctttagctcgccggaggatctatatgacgaggaatactacgacgagcagtcaccggagaagaagcgccgtctcactcctgagcaggtgcacttgttggagaagagctttgagacagaaaacaagctggagcccgagcgcaaaacccagctggccaaaaagctggggctgcagcccagacaggtggctgtatggttccaaaaccgccgtgcccggtggaagaccaagcagctcgagagggattatgatcagctcaaatcctcttatgactcccttctctctgattttgactccgttcgcaaagataacgataagctcaaatctgaggttgtttcattgatggaaaagttacaggggaaagtggttggaggagcagggggaaatgaaaaatctgacatcttggaggtggatgctatgacgatccttcaagtgaaggtgaaggctgaggaccggttgagcagtggcagtggtgggagcgcggtggtagatgagcatagtccacagctggtggacagtggggactcatattttcacactgatcatgaggagtatccagggcctggaggatgcaatgttcctccacccatggatggtttacaatcggaggaagatgatggtagtgatgatcatggcagttgccatggctacttctctaacgtctttgtggcagaagagcagcaccatgaacaaggagaagagcctattggatggttctggtcttaattgaattttagaatattatattacagttttttctatctacgcgcgctttgtatgatgaaataagtgtcgtaattccaacttcttattttaacatctattaatatgcttttgcagcttttaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="47745" stop="44090"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47445" g_stop="47411" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="35" r_length="35" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47410" i_stop="46861" i_length="550">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46860" g_stop="46724" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="172" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46723" i_stop="46276" i_length="448">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46275" g_stop="46036" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="412" r_length="240" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46035" i_stop="44906" i_length="1130">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44905" g_stop="44385" g_length="521"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="933" r_length="521" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E699978" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>933</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E699978" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47445" e_stop="47411"/>
          <exon e_start="46860" e_stop="46724"/>
          <exon e_start="46275" e_stop="46036"/>
          <exon e_start="44905" e_stop="44385"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAGGTATTCTCTAATCATTATGTTCTCTATTCCAATTACTTATATTACTATGAAAATATAATTTAAGAACTTTTTTGATGACTCAATTCCACTATTAAAATTGAAAGTAAAGTATGTATATGATATGAGTAACACTATCACTAGAAAGTGAAATTCGTCTTGATCTGATTTAATTTTTTTGAATGATGTAAATTTTATTATTCAAATTTACAACCAAAACAAGTATAGAAATATTTTGTCCAAGTTAATTTATTCTGAATCGTACAAGATGAAACGAAGCGGTTAACTTGTAGGGTAACCTGCGATAGATGATTTATAATTTCAGTGTACGAAGAGGTTAAGATATACGTAGATCCTTCGTACATATTTTTATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTTTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCATGTAAGTTCTAAGGGTGGCCTTTTATACTATTCTATTTTGAAGCTTGACTTATATTGATTGATACAGGACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAGGTTAGCATCCTGTTCCTCCTTTATCTACCCAAAAATATAAATTAAGTAAATGCGTTTTTTTAATAGTTCGATGGAGTAGTTATCAATTCAACATACTGTGACATATATCTCCTAGCTATCAAGATAGTTAAATTTTTTGGTTCAAATCTCACCATCACATATTTTTGGCAATTGGCCACTACATGTGAAACGATTTGTTTAGTCAAATTATAATTAAGTAACTAAAGAAGATTCCCTCTAAAGTGATTTAAGTTTTTAATTATATTGGAACATATTCACCACTATAGCATCAAATTCTTCACAATATCTACCTTTAAACCCTGAAAAGAAGAGAATTTCTTTTTTATCAACGAGCGTTTTCTTTAAGCAAAATTTTATAATTTTGTGGGATTCGATTACTTGCTGAGCAATAAGTGCATGTCCTGCGTTGTTGGGTACGTAAATGAAGGTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAAAGATAACGATAAGCTCAAATCTGAGGTATAACCATATAGTAATAGTGTTGTGATCATTTTATTTGCTTAGATTCTATTATACTTTGTACCAACCTCTTAACATCGATTTTTCTGGTCGATTTTTGGCATATCTATTAATACTATGTCCTTAAGGCCTTAGCTTTTGCAATACTCTATGAGAAAGAATTAACAAATCTTGGATAACACACCTGTCTTGCAACGATTTGATCAATGACAAAAAGCCGCCTTTCTTGTAACACTGGGGAGTCGGATATATATGTAGAATAATATGATGCCTTACTGAATAAAAACTAGCTAGGAGAGAGTCTATGATAATTTTTTTGTAGTATATAGTAGAATATTAAGATATGTTTGTTGACGAAATTTGTCGGCGAAGTTGGTAATTGGTAGAAATTTTAATCTGACTTTTAATTTGAGGTCATATTCTGTGTAACACCTGGCCATCAATATTAGTAGTGGGGAACCTCACAAACAATATTCTTCCTCACCTAGAATAGAAAATTATATCTGTCAATGTCCTTCTGAGTCATCTTGCATCAGAGTCAAATAAATAAAGTAGCATCTGTTCTAACCCCCCCACTTTCAATGTTTTTTTCTATTACTTGGATTTCAATTTCAAAAAAAGCGAATATACTTTTGATATATTGGGAAAACTTGCTTTAAAATATGCGTAGTGATGAAGACCTTACTATATAGATAGTGGATGTATCACTATCAGAGTTACGCTACTGTTATTTCTTAGTAAACTTTTACTAATTTATTCTTTTGCTTTTATTTTGCACCTTCGTTTTTTTAAAAGTGATGTAATAATAGGGTTATCAACAGCATATTTTTTTTTTTTACAATATTACGCTAAGTTGACTTATAACAATTGGCAACTCTTCATAATACGTCAAAGAGTTGGTATACATTGTAAGACTTGCGCATTTACGTCACACATCAAATCAAATTTTATATATAAGTTTATCACAACTTATTGTATAGTAGGTACACCTGACTTGGCTTGTATTCGAGGTTGCTAATCCCACTAAATGTGATTTTATCTTTTTAGCTTACATGATAGCGTGCAAGTAATTAAGTTGTTGTATATAGTAATAGATTTGAAACTATTTTGTTAATTGGGGAAAAATGCAGGTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTTATTCTC</genome_strand>
        <mrna_strand>GCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAAAGATAACGATAAGCTCAAATCTGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTTCTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTTAACATCTATTAATATGCTTTTGCAGCTTTTAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E308350" ref_strand="+" ref_description="SGN-E308350 [cLEY-25-I11]">
      <seq>agagagaggaagatgatggtagtgatgatcatggcagttgccatggctacttctctaacgtctttgtggcagaagagcagcaccatgaacaaggagaagagcctattggatggttctggtcttaattgaattttagaatattatattacagtttttcttatctacgcgcgctttgtatgatgaaataagtgtcgtaattccaacttcttatttaaacatctattaatatgcttttgcagcttttattcaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="44929" stop="44087"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44634" g_stop="44387" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="248" r_length="248" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="249" polyA_stop="268"/>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E308350" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>248</cumulative_length_of_scored_exons>
        <coverage percentage="0.925" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E308350" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44634" e_stop="44387"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTTATTC</genome_strand>
        <mrna_strand>AGAGAGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTTATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E712125" ref_strand="+" ref_description="SGN-E712125 [FB03DH06]">
      <seq>ggagcagggggaaatgaaaaatctgacatcttggaggtggatgctatgacgatccttcaagtgaaggtgaaggctgaggaccggttgagcagtggcagtggtgggagcgcggtggtagatgagcatagtccacagctggtggacagtggggactcatattttcacactgatcatgaggagtatccagggcctggaggatgcaatgttcctccacccatggatggtttacaatcggaggaagatgatggtagtgatgatcatggcagttgccatggctacttctctaacgtctttgtggcagaagagcagcaccatgaacaaggagaagagcctattggatggttctggtcttaattgaattttagaatattatattacagtttttcttatctacgcgcgctttgtatgatgaaataagtgtcgtaattccaacttcttatttaaacatctattaatatgcttttgcagcttttaaaacaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="45163" stop="44090"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44863" g_stop="44391" g_length="473"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="473" r_length="473" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="474" polyA_stop="490"/>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E712125" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>473</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E712125" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44863" e_stop="44391"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTT</genome_strand>
        <mrna_strand>GGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E353979" ref_strand="+" ref_description="SGN-E353979 [cLHT-6-E19](-)">
      <seq>gtggtaaatgagcatagtccccagctggtggacagtggggactcatattttcacactgaacatgaggagtatccagggcctggaggatgcaatgttcctccacccatggatggtttacaatcagaggaagatgatggtagtgatgatcatggcagttgccatggaaacttctctaacgtctttgtggcagaagagcagcgccatgaacaaggagaagagcctattggatggttctggtctaaattgaattttagaatattatattacagtttttcttatctacgcgcgctttgtatgatgaaataagtgttgtaattcaaacttcttatttaaacatctattaatatgcttttgcagctttttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="45052" stop="44091"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44752" g_stop="44391" g_length="362"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="362" r_length="362" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="364" polyA_stop="374"/>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E353979" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>362</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E353979" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44752" e_stop="44391"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTT</genome_strand>
        <mrna_strand>GTGGTAAATGAGCATAGTCCCCAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGAACATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCAGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGAAACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCGCCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTAAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTTGTAATTCAAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E712774" ref_strand="+" ref_description="SGN-E712774 [FB05DB07]">
      <seq>ctctaatctgaggttgtttcattgatggaaaagttacaggggaaagtggttggaggagcagggggaaatgaaaaatctgacatcttggaggtggatgctatgacgatccttcaagtgaaggtgaaggctgaggaccggttgagcagtggcagtggtgggagcgcggtggtagatgagcatagtccacagctggtggacagtggggactcatattttcacactgatcatgaggagtatccagggcctggaggatgcaatgttcctccacccatggatggtttacaatcggaggaagatgatggtagtgatgatcatggcagttgccatggctacttctctaacgtctttgtggcagaagagcagcaccatgaacaaggagaagagcctattggatggttctggtcttaattgaattttagaatattatattacagtttttcttatctacgcgcgctttgtatgatgaaataagtgtcgtaattccaacttcttatttaaacatctattaatagnnaannaaaaataaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="45214" stop="44107"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44905" g_stop="44410" g_length="496"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="508" r_length="496" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="519" polyA_stop="529"/>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E712774" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="0.938" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E712774" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44905" e_stop="44410"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTA</genome_strand>
        <mrna_strand>GTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E704716" ref_strand="+" ref_description="SGN-E704716 [FA25AC05]">
      <seq>ccaagatcgacgatgatgaagatggaggactcctcgaagaggcgacccttctttagctcgccggaggatctatatgacgaggaatactacgacgagcagtcaccggagaagaagcgccgtctcactcctgagcaggtgcacttgttggagaagagctttgagacagaaaacaagctggagcccgagcgcaaaacccagctggccaaaaagctggggctgcagcccagacaggtggctgtatggttccaaaaccgccgtgcccggtggaagaccaagcagctcgagagggattatgatcagctcaaatcctcttatgactcccttctctctgattttgactccgttcgcaaagataacgataagctcaaatctgaggttgtttcattgatggaaaagttacaggggaaagtggttggaggagcagggggaaatgaaaaatctgacatcttggaggtggatgctatgacgatccttcaagtgaaggtgaaggctgaggaccggttgagcagtggcagtggtgggagcgcggtggtagatgagcatagtccacagctggtggacagtggggactcatattttcacactgatcatgaggagtatccagggcctggaggatgcaatgttcctccacccatggatggtttacaatcggaggaagatgatggtagtgatgatcatggcagttgccatggctacttctctaacgtcttttgtggcagaagagcaccaccatgatcaaggagaagagcctatcggatggttctggtcttaattgaattttacaatattatattacagtttttcttatctacgcgcgctttgtatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="47158" stop="44155"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46858" g_stop="46724" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="135" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46723" i_stop="46276" i_length="448">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46275" g_stop="46036" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="375" r_length="240" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46035" i_stop="44906" i_length="1130">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44905" g_stop="44455" g_length="451"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="827" r_length="452" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E704716" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>826</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E704716" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46858" e_stop="46724"/>
          <exon e_start="46275" e_stop="46036"/>
          <exon e_start="44905" e_stop="44455"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAGGTTAGCATCCTGTTCCTCCTTTATCTACCCAAAAATATAAATTAAGTAAATGCGTTTTTTTAATAGTTCGATGGAGTAGTTATCAATTCAACATACTGTGACATATATCTCCTAGCTATCAAGATAGTTAAATTTTTTGGTTCAAATCTCACCATCACATATTTTTGGCAATTGGCCACTACATGTGAAACGATTTGTTTAGTCAAATTATAATTAAGTAACTAAAGAAGATTCCCTCTAAAGTGATTTAAGTTTTTAATTATATTGGAACATATTCACCACTATAGCATCAAATTCTTCACAATATCTACCTTTAAACCCTGAAAAGAAGAGAATTTCTTTTTTATCAACGAGCGTTTTCTTTAAGCAAAATTTTATAATTTTGTGGGATTCGATTACTTGCTGAGCAATAAGTGCATGTCCTGCGTTGTTGGGTACGTAAATGAAGGTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAAAGATAACGATAAGCTCAAATCTGAGGTATAACCATATAGTAATAGTGTTGTGATCATTTTATTTGCTTAGATTCTATTATACTTTGTACCAACCTCTTAACATCGATTTTTCTGGTCGATTTTTGGCATATCTATTAATACTATGTCCTTAAGGCCTTAGCTTTTGCAATACTCTATGAGAAAGAATTAACAAATCTTGGATAACACACCTGTCTTGCAACGATTTGATCAATGACAAAAAGCCGCCTTTCTTGTAACACTGGGGAGTCGGATATATATGTAGAATAATATGATGCCTTACTGAATAAAAACTAGCTAGGAGAGAGTCTATGATAATTTTTTTGTAGTATATAGTAGAATATTAAGATATGTTTGTTGACGAAATTTGTCGGCGAAGTTGGTAATTGGTAGAAATTTTAATCTGACTTTTAATTTGAGGTCATATTCTGTGTAACACCTGGCCATCAATATTAGTAGTGGGGAACCTCACAAACAATATTCTTCCTCACCTAGAATAGAAAATTATATCTGTCAATGTCCTTCTGAGTCATCTTGCATCAGAGTCAAATAAATAAAGTAGCATCTGTTCTAACCCCCCCACTTTCAATGTTTTTTTCTATTACTTGGATTTCAATTTCAAAAAAAGCGAATATACTTTTGATATATTGGGAAAACTTGCTTTAAAATATGCGTAGTGATGAAGACCTTACTATATAGATAGTGGATGTATCACTATCAGAGTTACGCTACTGTTATTTCTTAGTAAACTTTTACTAATTTATTCTTTTGCTTTTATTTTGCACCTTCGTTTTTTTAAAAGTGATGTAATAATAGGGTTATCAACAGCATATTTTTTTTTTTTACAATATTACGCTAAGTTGACTTATAACAATTGGCAACTCTTCATAATACGTCAAAGAGTTGGTATACATTGTAAGACTTGCGCATTTACGTCACACATCAAATCAAATTTTATATATAAGTTTATCACAACTTATTGTATAGTAGGTACACCTGACTTGGCTTGTATTCGAGGTTGCTAATCCCACTAAATGTGATTTTATCTTTTTAGCTTACATGATAGCGTGCAAGTAATTAAGTTGTTGTATATAGTAATAGATTTGAAACTATTTTGTTAATTGGGGAAAAATGCAGGTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTC-TTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGA</genome_strand>
        <mrna_strand>CCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAAAGATAACGATAAGCTCAAATCTGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTTGTGGCAGAAGAGCACCACCATGATCAAGGAGAAGAGCCTATCGGATGGTTCTGGTCTTAATTGAATTTTACAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E705831" ref_strand="+" ref_description="SGN-E705831 [FA28BA10]">
      <seq>cggaaacatataaataatcttctgtgtgtaaataggcgattttccagatagttgaaaatatgggatctgggcatatatttttcgacccgtcgtcgtgtcacggcaacatgctgttccttgggagcggagatcctgttttccgaggaccaagatcgacgatgatgaagatggaggactcctcgaagaggcgacccttctttagctcgccggaggatctatatgacgaggaatactacgacgagcagtcaccggagaagaagcgccgtctcactcctgagcaggtgcacttgttggagaagagctttgagacagaaaacaagctggagcccgagcgcaaaacccagctggccaaaaagctggggctgcagcccagacaggtggctgtatggttccaaaaccgccgtgcccggtggaagaccaagcagctcgagagggattatgatcagctcaaatcctcttatgactcccttctctctgattttgactccgttcgcaaagataacgataagctcaaatctgaggttgtttcattgatggaaaagttacaggggaaagtggttggaggagcagggggaaatgaaaaatctgacatcttggaggtggatgctatgacgatccttcaagtgaaggtgaaggctgaggaccggttgagcagtggcagtggtgggagcgcggtggtaaatgagcatagtccacagctggtggacagtggggactcatattttcacactgatcatgaggagtatccagggcctggaggatgcaatgttcctccacccatggatggtttacaatcggaggaagatgatggtagtgatgatcatgggcattgccatggctacttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="47854" stop="44281"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47554" g_stop="47411" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47410" i_stop="46861" i_length="550">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46860" g_stop="46724" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="281" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46723" i_stop="46276" i_length="448">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46275" g_stop="46036" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="521" r_length="240" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46035" i_stop="44906" i_length="1130">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44905" g_stop="44581" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="522" r_stop="846" r_length="325" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E705831" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>846</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E705831" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47554" e_stop="47411"/>
          <exon e_start="46860" e_stop="46724"/>
          <exon e_start="46275" e_stop="46036"/>
          <exon e_start="44905" e_stop="44581"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAGGTATTCTCTAATCATTATGTTCTCTATTCCAATTACTTATATTACTATGAAAATATAATTTAAGAACTTTTTTGATGACTCAATTCCACTATTAAAATTGAAAGTAAAGTATGTATATGATATGAGTAACACTATCACTAGAAAGTGAAATTCGTCTTGATCTGATTTAATTTTTTTGAATGATGTAAATTTTATTATTCAAATTTACAACCAAAACAAGTATAGAAATATTTTGTCCAAGTTAATTTATTCTGAATCGTACAAGATGAAACGAAGCGGTTAACTTGTAGGGTAACCTGCGATAGATGATTTATAATTTCAGTGTACGAAGAGGTTAAGATATACGTAGATCCTTCGTACATATTTTTATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTTTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCATGTAAGTTCTAAGGGTGGCCTTTTATACTATTCTATTTTGAAGCTTGACTTATATTGATTGATACAGGACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAGGTTAGCATCCTGTTCCTCCTTTATCTACCCAAAAATATAAATTAAGTAAATGCGTTTTTTTAATAGTTCGATGGAGTAGTTATCAATTCAACATACTGTGACATATATCTCCTAGCTATCAAGATAGTTAAATTTTTTGGTTCAAATCTCACCATCACATATTTTTGGCAATTGGCCACTACATGTGAAACGATTTGTTTAGTCAAATTATAATTAAGTAACTAAAGAAGATTCCCTCTAAAGTGATTTAAGTTTTTAATTATATTGGAACATATTCACCACTATAGCATCAAATTCTTCACAATATCTACCTTTAAACCCTGAAAAGAAGAGAATTTCTTTTTTATCAACGAGCGTTTTCTTTAAGCAAAATTTTATAATTTTGTGGGATTCGATTACTTGCTGAGCAATAAGTGCATGTCCTGCGTTGTTGGGTACGTAAATGAAGGTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAAAGATAACGATAAGCTCAAATCTGAGGTATAACCATATAGTAATAGTGTTGTGATCATTTTATTTGCTTAGATTCTATTATACTTTGTACCAACCTCTTAACATCGATTTTTCTGGTCGATTTTTGGCATATCTATTAATACTATGTCCTTAAGGCCTTAGCTTTTGCAATACTCTATGAGAAAGAATTAACAAATCTTGGATAACACACCTGTCTTGCAACGATTTGATCAATGACAAAAAGCCGCCTTTCTTGTAACACTGGGGAGTCGGATATATATGTAGAATAATATGATGCCTTACTGAATAAAAACTAGCTAGGAGAGAGTCTATGATAATTTTTTTGTAGTATATAGTAGAATATTAAGATATGTTTGTTGACGAAATTTGTCGGCGAAGTTGGTAATTGGTAGAAATTTTAATCTGACTTTTAATTTGAGGTCATATTCTGTGTAACACCTGGCCATCAATATTAGTAGTGGGGAACCTCACAAACAATATTCTTCCTCACCTAGAATAGAAAATTATATCTGTCAATGTCCTTCTGAGTCATCTTGCATCAGAGTCAAATAAATAAAGTAGCATCTGTTCTAACCCCCCCACTTTCAATGTTTTTTTCTATTACTTGGATTTCAATTTCAAAAAAAGCGAATATACTTTTGATATATTGGGAAAACTTGCTTTAAAATATGCGTAGTGATGAAGACCTTACTATATAGATAGTGGATGTATCACTATCAGAGTTACGCTACTGTTATTTCTTAGTAAACTTTTACTAATTTATTCTTTTGCTTTTATTTTGCACCTTCGTTTTTTTAAAAGTGATGTAATAATAGGGTTATCAACAGCATATTTTTTTTTTTTACAATATTACGCTAAGTTGACTTATAACAATTGGCAACTCTTCATAATACGTCAAAGAGTTGGTATACATTGTAAGACTTGCGCATTTACGTCACACATCAAATCAAATTTTATATATAAGTTTATCACAACTTATTGTATAGTAGGTACACCTGACTTGGCTTGTATTCGAGGTTGCTAATCCCACTAAATGTGATTTTATCTTTTTAGCTTACATGATAGCGTGCAAGTAATTAAGTTGTTGTATATAGTAATAGATTTGAAACTATTTTGTTAATTGGGGAAAAATGCAGGTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCT</genome_strand>
        <mrna_strand>CGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAAAGATAACGATAAGCTCAAATCTGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAAATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGGCATTGCCATGGCTACTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E706629" ref_strand="+" ref_description="SGN-E706629 [FA30CA03]">
      <seq>tacaaaacagcacatatatatagagacaaaatcacataatacgccctcgccggaatcttattttcactgtcgccggccgttaaaactttttttttctagttcggaggtcaaataattaacctccgatcggaagaagtagttattctaactgcttctatttaatctgaaaacgggaaaacccctgagctggttaaggtggatttcgtgatgggattttgtatttgtcctttggaaactcctgctagattactgtggagtactagtttcttccgccacaagcttatgctcttctaaaacttagtcaactctcttttttcatacacatccctgctaaaaaagaagaactctgtgctggagtttttgttttcctttttctgtttcgccggaaacatataaataatcttctgtgtgtaaataggcgattttccagatagttgaaaatatgggatctgggcatatatttttcgacccgtcgtcgtgtcacggcaacatgctgttccttgggagcggagatcctgttttccgaggaccaagatcgacgatgatgaagatggaggactcctcgaagaggcgacccttctttagctcgccggaggatctatatgacgaggaatactacgacgagcagtcaccggagaagaagcgccgtctcactcctgagcaggttgtttcattgatggaaaagttacaggggaaagtggttggaggagcagggggaaatgaaaaatctgacatcttggaggtggatgctatgacgatccttcaagtgaaggtgaaggctgaggaccggttgagcagtggcagtggtgggagcgcggtggtaaatgagcatagtccacagctggtggacagtggggactcatattttcacactgatcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="48237" stop="44389"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47937" g_stop="47411" g_length="527"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="527" r_length="527" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47410" i_stop="46861" i_length="550">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46860" g_stop="46724" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="528" r_stop="664" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46723" i_stop="44906" i_length="1818">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44905" g_stop="44689" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="665" r_stop="881" r_length="217" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E706629" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>881</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E706629" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47937" e_stop="47411"/>
          <exon e_start="46860" e_stop="46724"/>
          <exon e_start="44905" e_stop="44689"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAGGTATTCTCTAATCATTATGTTCTCTATTCCAATTACTTATATTACTATGAAAATATAATTTAAGAACTTTTTTGATGACTCAATTCCACTATTAAAATTGAAAGTAAAGTATGTATATGATATGAGTAACACTATCACTAGAAAGTGAAATTCGTCTTGATCTGATTTAATTTTTTTGAATGATGTAAATTTTATTATTCAAATTTACAACCAAAACAAGTATAGAAATATTTTGTCCAAGTTAATTTATTCTGAATCGTACAAGATGAAACGAAGCGGTTAACTTGTAGGGTAACCTGCGATAGATGATTTATAATTTCAGTGTACGAAGAGGTTAAGATATACGTAGATCCTTCGTACATATTTTTATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTTTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCATGTAAGTTCTAAGGGTGGCCTTTTATACTATTCTATTTTGAAGCTTGACTTATATTGATTGATACAGGACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAGGTTAGCATCCTGTTCCTCCTTTATCTACCCAAAAATATAAATTAAGTAAATGCGTTTTTTTAATAGTTCGATGGAGTAGTTATCAATTCAACATACTGTGACATATATCTCCTAGCTATCAAGATAGTTAAATTTTTTGGTTCAAATCTCACCATCACATATTTTTGGCAATTGGCCACTACATGTGAAACGATTTGTTTAGTCAAATTATAATTAAGTAACTAAAGAAGATTCCCTCTAAAGTGATTTAAGTTTTTAATTATATTGGAACATATTCACCACTATAGCATCAAATTCTTCACAATATCTACCTTTAAACCCTGAAAAGAAGAGAATTTCTTTTTTATCAACGAGCGTTTTCTTTAAGCAAAATTTTATAATTTTGTGGGATTCGATTACTTGCTGAGCAATAAGTGCATGTCCTGCGTTGTTGGGTACGTAAATGAAGGTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAAAGATAACGATAAGCTCAAATCTGAGGTATAACCATATAGTAATAGTGTTGTGATCATTTTATTTGCTTAGATTCTATTATACTTTGTACCAACCTCTTAACATCGATTTTTCTGGTCGATTTTTGGCATATCTATTAATACTATGTCCTTAAGGCCTTAGCTTTTGCAATACTCTATGAGAAAGAATTAACAAATCTTGGATAACACACCTGTCTTGCAACGATTTGATCAATGACAAAAAGCCGCCTTTCTTGTAACACTGGGGAGTCGGATATATATGTAGAATAATATGATGCCTTACTGAATAAAAACTAGCTAGGAGAGAGTCTATGATAATTTTTTTGTAGTATATAGTAGAATATTAAGATATGTTTGTTGACGAAATTTGTCGGCGAAGTTGGTAATTGGTAGAAATTTTAATCTGACTTTTAATTTGAGGTCATATTCTGTGTAACACCTGGCCATCAATATTAGTAGTGGGGAACCTCACAAACAATATTCTTCCTCACCTAGAATAGAAAATTATATCTGTCAATGTCCTTCTGAGTCATCTTGCATCAGAGTCAAATAAATAAAGTAGCATCTGTTCTAACCCCCCCACTTTCAATGTTTTTTTCTATTACTTGGATTTCAATTTCAAAAAAAGCGAATATACTTTTGATATATTGGGAAAACTTGCTTTAAAATATGCGTAGTGATGAAGACCTTACTATATAGATAGTGGATGTATCACTATCAGAGTTACGCTACTGTTATTTCTTAGTAAACTTTTACTAATTTATTCTTTTGCTTTTATTTTGCACCTTCGTTTTTTTAAAAGTGATGTAATAATAGGGTTATCAACAGCATATTTTTTTTTTTTACAATATTACGCTAAGTTGACTTATAACAATTGGCAACTCTTCATAATACGTCAAAGAGTTGGTATACATTGTAAGACTTGCGCATTTACGTCACACATCAAATCAAATTTTATATATAAGTTTATCACAACTTATTGTATAGTAGGTACACCTGACTTGGCTTGTATTCGAGGTTGCTAATCCCACTAAATGTGATTTTATCTTTTTAGCTTACATGATAGCGTGCAAGTAATTAAGTTGTTGTATATAGTAATAGATTTGAAACTATTTTGTTAATTGGGGAAAAATGCAGGTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATG</genome_strand>
        <mrna_strand>TACAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAAATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E305045" ref_strand="+" ref_description="SGN-E305045 [cLEX-10-P11]">
      <seq>agatcctgttttccgaggaccaagatcgacgatgatgaagatggaggactcctcgaagaggcgacccttctttagctcgccggaggatctatatgacgaggaatactacgacgagcagtcaccggagaagaagcgccgtctcactcctgagcaggtgcacttgttggagaagagctttgagacagaaaacaagctggagcccgagcgcaaaacccagctggccaaaaagctggggctgcagcccagacaggtggctgtatggttccaaaaccgccgtgcccggtggaagaccaagcagctcgagagggattatgatcagctcaaatcctcttatgactcccttctctctgattttgactccgttcgcaaagataacgataagctcaaatctgaggttgtttcattgatggaaaagttacaggggaaagtggttggaggagcagggggaaatgaaaaatctgacatcttggaggtggatgctatgacgatccttcaagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="47176" stop="44501"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46860" g_stop="46724" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="154" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46723" i_stop="46276" i_length="448">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46275" g_stop="46036" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="394" r_length="240" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46035" i_stop="44906" i_length="1130">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44905" g_stop="44801" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="499" r_length="105" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E305045" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>482</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E305045" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46860" e_stop="46724"/>
          <exon e_start="46275" e_stop="46036"/>
          <exon e_start="44905" e_stop="44801"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAGGTTAGCATCCTGTTCCTCCTTTATCTACCCAAAAATATAAATTAAGTAAATGCGTTTTTTTAATAGTTCGATGGAGTAGTTATCAATTCAACATACTGTGACATATATCTCCTAGCTATCAAGATAGTTAAATTTTTTGGTTCAAATCTCACCATCACATATTTTTGGCAATTGGCCACTACATGTGAAACGATTTGTTTAGTCAAATTATAATTAAGTAACTAAAGAAGATTCCCTCTAAAGTGATTTAAGTTTTTAATTATATTGGAACATATTCACCACTATAGCATCAAATTCTTCACAATATCTACCTTTAAACCCTGAAAAGAAGAGAATTTCTTTTTTATCAACGAGCGTTTTCTTTAAGCAAAATTTTATAATTTTGTGGGATTCGATTACTTGCTGAGCAATAAGTGCATGTCCTGCGTTGTTGGGTACGTAAATGAAGGTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAAAGATAACGATAAGCTCAAATCTGAGGTATAACCATATAGTAATAGTGTTGTGATCATTTTATTTGCTTAGATTCTATTATACTTTGTACCAACCTCTTAACATCGATTTTTCTGGTCGATTTTTGGCATATCTATTAATACTATGTCCTTAAGGCCTTAGCTTTTGCAATACTCTATGAGAAAGAATTAACAAATCTTGGATAACACACCTGTCTTGCAACGATTTGATCAATGACAAAAAGCCGCCTTTCTTGTAACACTGGGGAGTCGGATATATATGTAGAATAATATGATGCCTTACTGAATAAAAACTAGCTAGGAGAGAGTCTATGATAATTTTTTTGTAGTATATAGTAGAATATTAAGATATGTTTGTTGACGAAATTTGTCGGCGAAGTTGGTAATTGGTAGAAATTTTAATCTGACTTTTAATTTGAGGTCATATTCTGTGTAACACCTGGCCATCAATATTAGTAGTGGGGAACCTCACAAACAATATTCTTCCTCACCTAGAATAGAAAATTATATCTGTCAATGTCCTTCTGAGTCATCTTGCATCAGAGTCAAATAAATAAAGTAGCATCTGTTCTAACCCCCCCACTTTCAATGTTTTTTTCTATTACTTGGATTTCAATTTCAAAAAAAGCGAATATACTTTTGATATATTGGGAAAACTTGCTTTAAAATATGCGTAGTGATGAAGACCTTACTATATAGATAGTGGATGTATCACTATCAGAGTTACGCTACTGTTATTTCTTAGTAAACTTTTACTAATTTATTCTTTTGCTTTTATTTTGCACCTTCGTTTTTTTAAAAGTGATGTAATAATAGGGTTATCAACAGCATATTTTTTTTTTTTACAATATTACGCTAAGTTGACTTATAACAATTGGCAACTCTTCATAATACGTCAAAGAGTTGGTATACATTGTAAGACTTGCGCATTTACGTCACACATCAAATCAAATTTTATATATAAGTTTATCACAACTTATTGTATAGTAGGTACACCTGACTTGGCTTGTATTCGAGGTTGCTAATCCCACTAAATGTGATTTTATCTTTTTAGCTTACATGATAGCGTGCAAGTAATTAAGTTGTTGTATATAGTAATAGATTTGAAACTATTTTGTTAATTGGGGAAAAATGCAGGTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTG</genome_strand>
        <mrna_strand>GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAAAGATAACGATAAGCTCAAATCTGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E718572" ref_strand="+" ref_description="SGN-E718572 [FC05AC04]">
      <seq>tattttcactgtcgccggccgttaaaactttttttttctagttcggaggtcaaataattaacctccgatcggaagaagtagttattctaactgcttctatttaatctgaaaacgggaaaacccctgagctggttaaggtggatttcgtgatgggattttgtatttgtcctttggaaactcctgctagattactgtggagtactagtttcttccgccacaagcttatgctcttctaaaacttagtcaactctcttttttcatacacatccctgctaaaaaagaaaaactctgtgctggagtttttgttttcctttttctgtttcgccggaaacatataaataatcttctgtgtgtaaataggcgattttccagatagttgaaaatatgggatctgggcatatatttttcgacccgtcgtcgtgtcacggcaacatgctgttccttgggagcggagatcctgttttccgaggaccaagatcgacgatgatgaagatggaggactcctcgaagaggcgacccttctttagctcgccggaggatctatatgacgaggaatactacgacgagcagtcaccggagaagaagcgccgtctcactcctgagcaggttgtttcattgatggaaaagttacaggggaaagtggttggaggagcagggggaaatgaaaaatctgacatcttggaggtggatgctatgacgatccttcaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="48179" stop="44502"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47879" g_stop="47411" g_length="469"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="469" r_length="469" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47410" i_stop="46861" i_length="550">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46860" g_stop="46724" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="470" r_stop="606" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46723" i_stop="44906" i_length="1818">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44905" g_stop="44802" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="607" r_stop="710" r_length="104" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E718572" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>710</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E718572" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47879" e_stop="47411"/>
          <exon e_start="46860" e_stop="46724"/>
          <exon e_start="44905" e_stop="44802"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAGGTATTCTCTAATCATTATGTTCTCTATTCCAATTACTTATATTACTATGAAAATATAATTTAAGAACTTTTTTGATGACTCAATTCCACTATTAAAATTGAAAGTAAAGTATGTATATGATATGAGTAACACTATCACTAGAAAGTGAAATTCGTCTTGATCTGATTTAATTTTTTTGAATGATGTAAATTTTATTATTCAAATTTACAACCAAAACAAGTATAGAAATATTTTGTCCAAGTTAATTTATTCTGAATCGTACAAGATGAAACGAAGCGGTTAACTTGTAGGGTAACCTGCGATAGATGATTTATAATTTCAGTGTACGAAGAGGTTAAGATATACGTAGATCCTTCGTACATATTTTTATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTTTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCATGTAAGTTCTAAGGGTGGCCTTTTATACTATTCTATTTTGAAGCTTGACTTATATTGATTGATACAGGACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAGGTTAGCATCCTGTTCCTCCTTTATCTACCCAAAAATATAAATTAAGTAAATGCGTTTTTTTAATAGTTCGATGGAGTAGTTATCAATTCAACATACTGTGACATATATCTCCTAGCTATCAAGATAGTTAAATTTTTTGGTTCAAATCTCACCATCACATATTTTTGGCAATTGGCCACTACATGTGAAACGATTTGTTTAGTCAAATTATAATTAAGTAACTAAAGAAGATTCCCTCTAAAGTGATTTAAGTTTTTAATTATATTGGAACATATTCACCACTATAGCATCAAATTCTTCACAATATCTACCTTTAAACCCTGAAAAGAAGAGAATTTCTTTTTTATCAACGAGCGTTTTCTTTAAGCAAAATTTTATAATTTTGTGGGATTCGATTACTTGCTGAGCAATAAGTGCATGTCCTGCGTTGTTGGGTACGTAAATGAAGGTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAAAGATAACGATAAGCTCAAATCTGAGGTATAACCATATAGTAATAGTGTTGTGATCATTTTATTTGCTTAGATTCTATTATACTTTGTACCAACCTCTTAACATCGATTTTTCTGGTCGATTTTTGGCATATCTATTAATACTATGTCCTTAAGGCCTTAGCTTTTGCAATACTCTATGAGAAAGAATTAACAAATCTTGGATAACACACCTGTCTTGCAACGATTTGATCAATGACAAAAAGCCGCCTTTCTTGTAACACTGGGGAGTCGGATATATATGTAGAATAATATGATGCCTTACTGAATAAAAACTAGCTAGGAGAGAGTCTATGATAATTTTTTTGTAGTATATAGTAGAATATTAAGATATGTTTGTTGACGAAATTTGTCGGCGAAGTTGGTAATTGGTAGAAATTTTAATCTGACTTTTAATTTGAGGTCATATTCTGTGTAACACCTGGCCATCAATATTAGTAGTGGGGAACCTCACAAACAATATTCTTCCTCACCTAGAATAGAAAATTATATCTGTCAATGTCCTTCTGAGTCATCTTGCATCAGAGTCAAATAAATAAAGTAGCATCTGTTCTAACCCCCCCACTTTCAATGTTTTTTTCTATTACTTGGATTTCAATTTCAAAAAAAGCGAATATACTTTTGATATATTGGGAAAACTTGCTTTAAAATATGCGTAGTGATGAAGACCTTACTATATAGATAGTGGATGTATCACTATCAGAGTTACGCTACTGTTATTTCTTAGTAAACTTTTACTAATTTATTCTTTTGCTTTTATTTTGCACCTTCGTTTTTTTAAAAGTGATGTAATAATAGGGTTATCAACAGCATATTTTTTTTTTTTACAATATTACGCTAAGTTGACTTATAACAATTGGCAACTCTTCATAATACGTCAAAGAGTTGGTATACATTGTAAGACTTGCGCATTTACGTCACACATCAAATCAAATTTTATATATAAGTTTATCACAACTTATTGTATAGTAGGTACACCTGACTTGGCTTGTATTCGAGGTTGCTAATCCCACTAAATGTGATTTTATCTTTTTAGCTTACATGATAGCGTGCAAGTAATTAAGTTGTTGTATATAGTAATAGATTTGAAACTATTTTGTTAATTGGGGAAAAATGCAGGTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGT</genome_strand>
        <mrna_strand>TATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAAAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E253438" ref_strand="+" ref_description="SGN-E253438 [cLEG-24-B22]">
      <seq>tataagttgtttcagatagatagttttaaattcaattcacttagggtattgtgtttatagattgattatctctagtacagtaaaaataatgataaaattgtaacaacctttttgcatgaccaagatcgacgatgatgaagatggaggactcctcgaagaggcgacccttctttagctcgccggaggatctatatgacgaggaatactaccacgagcagtcaccgtataagaagcgccgtctcactcctgagcaggtgcacttgttggagaagagctttgagacagaaaacaagctggagcccgagcgcaaaacccagctggccaaaaagctggggctgcagcccagacaggtggctgtatggttccaaaaccgccgtgcccggtggaagaccaagcagctcgagagggattatgatcagctcaaatcctcttatgactcccttctctctgattttgactccgttcgcaaagataacgatgagctcaaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="47343" stop="45740"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47043" g_stop="46927" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="117" r_length="117" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46926" i_stop="46861" i_length="66">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46860" g_stop="46724" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="254" r_length="137" r_score="0.978"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46723" i_stop="46276" i_length="448">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.784" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46275" g_stop="46040" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="490" r_length="236" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E253438" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>490</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E253438" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47043" e_stop="46927"/>
          <exon e_start="46860" e_stop="46724"/>
          <exon e_start="46275" e_stop="46040"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTTTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCATGTAAGTTCTAAGGGTGGCCTTTTATACTATTCTATTTTGAAGCTTGACTTATATTGATTGATACAGGACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAGGTTAGCATCCTGTTCCTCCTTTATCTACCCAAAAATATAAATTAAGTAAATGCGTTTTTTTAATAGTTCGATGGAGTAGTTATCAATTCAACATACTGTGACATATATCTCCTAGCTATCAAGATAGTTAAATTTTTTGGTTCAAATCTCACCATCACATATTTTTGGCAATTGGCCACTACATGTGAAACGATTTGTTTAGTCAAATTATAATTAAGTAACTAAAGAAGATTCCCTCTAAAGTGATTTAAGTTTTTAATTATATTGGAACATATTCACCACTATAGCATCAAATTCTTCACAATATCTACCTTTAAACCCTGAAAAGAAGAGAATTTCTTTTTTATCAACGAGCGTTTTCTTTAAGCAAAATTTTATAATTTTGTGGGATTCGATTACTTGCTGAGCAATAAGTGCATGTCCTGCGTTGTTGGGTACGTAAATGAAGGTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAAAGATAACGATAAGCTCAAATC</genome_strand>
        <mrna_strand>TATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTGTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCAT..................................................................GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACCACGAGCAGTCACCGTATAAGAAGCGCCGTCTCACTCCTGAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAAAGATAACGATGAGCTCAAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E736423" ref_strand="+" ref_description="SGN-E736423 [LC05CH06]">
      <seq>ccttattttcactgtcgccggccgttaaaactttttttttctagttcggaggtcaaataattaacctccgatcggaagaagtagttattctaactgcttctatttaatctgaaaacgggaaaacccctgagctggttaaggtggatttcgtgatgggattttgtatttgtcctttggaaactcctgctagattactgtggagtactagtttcttccgccacaagcttatgctcttctaaaacttagtcaactctcttttttcatacacatccctgctaaaaaagaagaactctgtgctggagtttttgttttcctttttctgtttcgccggaaacatataaataatcttctgtgtgtaaataggcgattttccagatagttgaaaatatgggatctgggcatatatttttcgacccgtcgtcgtgtcacggcaacatgctgttccttgggagcggagatcctgttttccgaggaccaagatcgacgatgatgaagatggaggactcctcgaagaggcgacccttctttagctcgccggaggatctatatgacgaggaatactacgacgagcagtcaccggagaagaagcgccgtctcactcctgagcaggtgcacttgttggagaagagctttgagacagaaaacaagctggagcccgagcgcaaaacccagctggccaaaaagctggggctgcagcccagacaggtggctgtatggttccaaaaccgccgtgcccggtggaagaccaagcagctcgagagggattatgatcagctcaaatcctcttatgactcccttctctctgattttgactccgttcgcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="48181" stop="45761"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47882" g_stop="47411" g_length="472"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="472" r_length="472" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47410" i_stop="46861" i_length="550">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46860" g_stop="46724" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="609" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46723" i_stop="46276" i_length="448">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46275" g_stop="46061" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="610" r_stop="824" r_length="215" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E736423" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>824</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E736423" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47882" e_stop="47411"/>
          <exon e_start="46860" e_stop="46724"/>
          <exon e_start="46275" e_stop="46061"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAGGTATTCTCTAATCATTATGTTCTCTATTCCAATTACTTATATTACTATGAAAATATAATTTAAGAACTTTTTTGATGACTCAATTCCACTATTAAAATTGAAAGTAAAGTATGTATATGATATGAGTAACACTATCACTAGAAAGTGAAATTCGTCTTGATCTGATTTAATTTTTTTGAATGATGTAAATTTTATTATTCAAATTTACAACCAAAACAAGTATAGAAATATTTTGTCCAAGTTAATTTATTCTGAATCGTACAAGATGAAACGAAGCGGTTAACTTGTAGGGTAACCTGCGATAGATGATTTATAATTTCAGTGTACGAAGAGGTTAAGATATACGTAGATCCTTCGTACATATTTTTATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTTTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCATGTAAGTTCTAAGGGTGGCCTTTTATACTATTCTATTTTGAAGCTTGACTTATATTGATTGATACAGGACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAGGTTAGCATCCTGTTCCTCCTTTATCTACCCAAAAATATAAATTAAGTAAATGCGTTTTTTTAATAGTTCGATGGAGTAGTTATCAATTCAACATACTGTGACATATATCTCCTAGCTATCAAGATAGTTAAATTTTTTGGTTCAAATCTCACCATCACATATTTTTGGCAATTGGCCACTACATGTGAAACGATTTGTTTAGTCAAATTATAATTAAGTAACTAAAGAAGATTCCCTCTAAAGTGATTTAAGTTTTTAATTATATTGGAACATATTCACCACTATAGCATCAAATTCTTCACAATATCTACCTTTAAACCCTGAAAAGAAGAGAATTTCTTTTTTATCAACGAGCGTTTTCTTTAAGCAAAATTTTATAATTTTGTGGGATTCGATTACTTGCTGAGCAATAAGTGCATGTCCTGCGTTGTTGGGTACGTAAATGAAGGTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAA</genome_strand>
        <mrna_strand>CCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E726372" ref_strand="+" ref_description="SGN-E726372 [LA11CE07]">
      <seq>cttattttcactgtcgccggccgttaaaactttttttttctagttcggaggtcaaataattaacctccgatcggaagaagtagttattctaactgcttctatttaatctgaaaacgggaaaacccctgagctggttaaggtggatttcgtgatgggattttgtatttgtcctttggaaactcctgctagattactgtggagtactagtttcttccgccacaagcttatgctcttctaaaacttagtcaactctcttttttcatacacatccctgctaaaaaagaagaactctgtgctggagtttttgttttcctttttctgtttcgccggaaacatataaataatcttctgtgtgtaaataggcgattttccagatagttgaaaatatgggatctgggcatatatttttcgacccgtcgtcgtgtcacggcaacatgctgttccttgggagcggagatcctgttttccgaggaccaagatcgacgatgatgaagatggaggactcctcgaagaggcgacccttctttagctcgccggaggatctatatgacgaggaatactacgacgagcagtcaccggagaagaagcgccgtctcactcctgagcaggtgcacttgttggagaagagctttgagacagaaaacaagctggagcccgagcgcaaaacccagctggccaaaaagctggggctgcagcccagacaggtggctgtatggttccaaaaccgccgtgcccggtggaagaccaagcagctcgagagggattatgatcagctcaaatcctcttatgactcccttctctctgattttgactccgttcgcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="48181" stop="45761"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47881" g_stop="47411" g_length="471"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="471" r_length="471" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47410" i_stop="46861" i_length="550">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46860" g_stop="46724" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="608" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46723" i_stop="46276" i_length="448">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46275" g_stop="46061" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="609" r_stop="823" r_length="215" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E726372" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>823</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E726372" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47881" e_stop="47411"/>
          <exon e_start="46860" e_stop="46724"/>
          <exon e_start="46275" e_stop="46061"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAGGTATTCTCTAATCATTATGTTCTCTATTCCAATTACTTATATTACTATGAAAATATAATTTAAGAACTTTTTTGATGACTCAATTCCACTATTAAAATTGAAAGTAAAGTATGTATATGATATGAGTAACACTATCACTAGAAAGTGAAATTCGTCTTGATCTGATTTAATTTTTTTGAATGATGTAAATTTTATTATTCAAATTTACAACCAAAACAAGTATAGAAATATTTTGTCCAAGTTAATTTATTCTGAATCGTACAAGATGAAACGAAGCGGTTAACTTGTAGGGTAACCTGCGATAGATGATTTATAATTTCAGTGTACGAAGAGGTTAAGATATACGTAGATCCTTCGTACATATTTTTATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTTTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCATGTAAGTTCTAAGGGTGGCCTTTTATACTATTCTATTTTGAAGCTTGACTTATATTGATTGATACAGGACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAGGTTAGCATCCTGTTCCTCCTTTATCTACCCAAAAATATAAATTAAGTAAATGCGTTTTTTTAATAGTTCGATGGAGTAGTTATCAATTCAACATACTGTGACATATATCTCCTAGCTATCAAGATAGTTAAATTTTTTGGTTCAAATCTCACCATCACATATTTTTGGCAATTGGCCACTACATGTGAAACGATTTGTTTAGTCAAATTATAATTAAGTAACTAAAGAAGATTCCCTCTAAAGTGATTTAAGTTTTTAATTATATTGGAACATATTCACCACTATAGCATCAAATTCTTCACAATATCTACCTTTAAACCCTGAAAAGAAGAGAATTTCTTTTTTATCAACGAGCGTTTTCTTTAAGCAAAATTTTATAATTTTGTGGGATTCGATTACTTGCTGAGCAATAAGTGCATGTCCTGCGTTGTTGGGTACGTAAATGAAGGTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAA</genome_strand>
        <mrna_strand>CTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E703216" ref_strand="+" ref_description="SGN-E703216 [FA20DE10]">
      <seq>acaaaacagcacatatatatagagacaaaatcacataatacgccctcgccggaatcttattttcactgtcgccggccgttaaaactttttttttctagttcggaggtcaaataattaacctccgatcggaagaagtagttattctaactgcttctatttaatctgaaaacgggaaaacccctgagctggttaaggtggatttcgtgatgggattttgtatttgtcctttggaaactcctgctagattactgtggagtactagtttcttccgccacaagcttatgctcttctaaaacttagtcaactctcttttttcatacacatccctgctaaaaaagaagaactctgtgctggagtttttgttttcctttttctgtttcgccggaaacatataaataatcttctgtgtgtaaataggcgattttccagatagttgaaaatatgggatctgggcatatatttttcgacccgtcgtcgtgtcacggcaacatgctgttccttgggagcggagatcctgttttccgaggaccaagatcgacgatgatgaagatggaggactcctcgaagaggcgacccttctttagctcgccggaggatctatatgacgaggaatactacgacgagcagtcaccggagaagaagcgccgtctcactcctgagcaggtgcacttgttggagaagagctttgagacagaaaacaagctggagcccgagcgcaaaacccagctggccaaaaagctggggctgcagcccagacaggtggctgtatggttccaaaaccgccgtgcccggtggaagaccaagcagctcgagagggattatgatcagcctcaatcctcttatgactcccctctctctgattttgactccgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="48236" stop="45767"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47936" g_stop="47411" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47410" i_stop="46861" i_length="550">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46860" g_stop="46724" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="663" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46723" i_stop="46276" i_length="448">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46275" g_stop="46067" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="664" r_stop="872" r_length="209" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E703216" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>872</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703216" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47936" e_stop="47411"/>
          <exon e_start="46860" e_stop="46724"/>
          <exon e_start="46275" e_stop="46067"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAGGTATTCTCTAATCATTATGTTCTCTATTCCAATTACTTATATTACTATGAAAATATAATTTAAGAACTTTTTTGATGACTCAATTCCACTATTAAAATTGAAAGTAAAGTATGTATATGATATGAGTAACACTATCACTAGAAAGTGAAATTCGTCTTGATCTGATTTAATTTTTTTGAATGATGTAAATTTTATTATTCAAATTTACAACCAAAACAAGTATAGAAATATTTTGTCCAAGTTAATTTATTCTGAATCGTACAAGATGAAACGAAGCGGTTAACTTGTAGGGTAACCTGCGATAGATGATTTATAATTTCAGTGTACGAAGAGGTTAAGATATACGTAGATCCTTCGTACATATTTTTATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTTTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCATGTAAGTTCTAAGGGTGGCCTTTTATACTATTCTATTTTGAAGCTTGACTTATATTGATTGATACAGGACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAGGTTAGCATCCTGTTCCTCCTTTATCTACCCAAAAATATAAATTAAGTAAATGCGTTTTTTTAATAGTTCGATGGAGTAGTTATCAATTCAACATACTGTGACATATATCTCCTAGCTATCAAGATAGTTAAATTTTTTGGTTCAAATCTCACCATCACATATTTTTGGCAATTGGCCACTACATGTGAAACGATTTGTTTAGTCAAATTATAATTAAGTAACTAAAGAAGATTCCCTCTAAAGTGATTTAAGTTTTTAATTATATTGGAACATATTCACCACTATAGCATCAAATTCTTCACAATATCTACCTTTAAACCCTGAAAAGAAGAGAATTTCTTTTTTATCAACGAGCGTTTTCTTTAAGCAAAATTTTATAATTTTGTGGGATTCGATTACTTGCTGAGCAATAAGTGCATGTCCTGCGTTGTTGGGTACGTAAATGAAGGTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGT</genome_strand>
        <mrna_strand>ACAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCCTCAATCCTCTTATGACTCCCCTCTCTCTGATTTTGACTCCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E735960" ref_strand="+" ref_description="SGN-E735960 [LC03DD05]">
      <seq>cgcttattttgcctgtcgccggccgataaaactttttttttctgatccggaggtcgaataattaacctccgatcggaagaagtagttattcaaacggcttctatttaatctgagaaacgggaaaacccctgatctggtgaaggtggatttcgcggtgggattttgtatttgtcctttggaaactcctgctagattactgaggagtactagtttcttccgccacaagcttatgctcttctaaaacttagtcaagtctcttttttcatacagatccctgctaaaaaagaagaactctgtgctggagtttttgttttcctttttctgtttcgccggagacatataaataatcttctgtgtgtaaataggcgattttccagatagttgaaaatatgggatctgggcatatatttttcgacccgtcgtcgtgtcacggcaacatgctgttccttgggagcggagatcctgttttccgaggaccaagatcgacgatgatgaagatggaggactcctcgaagaggcgacccttctttagctcgccggaggatctatatgacgaggaatactacgacgagcagtcaccggagaagaagcgccgtctcactcctgagcaggtgcacttgttggagaagagctttgagacagaaaacaagctggagcccgagcgcaaaacccagctggccaaaaagctggggctgcagcccagacaggtggctgtatggttccaaaaccgccgtgcccggtggaagaccaagcagctccagaggggattatgatcagctcaaatcctcttatgactcccttctctctgattttgactccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="48181" stop="45768"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47883" g_stop="47411" g_length="473"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="474" r_length="474" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47410" i_stop="46861" i_length="550">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46860" g_stop="46724" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="475" r_stop="611" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46723" i_stop="46276" i_length="448">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46275" g_stop="46068" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="612" r_stop="820" r_length="209" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E735960" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>818</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E735960" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47883" e_stop="47411"/>
          <exon e_start="46860" e_stop="46724"/>
          <exon e_start="46275" e_stop="46068"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGA-AAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAGGTATTCTCTAATCATTATGTTCTCTATTCCAATTACTTATATTACTATGAAAATATAATTTAAGAACTTTTTTGATGACTCAATTCCACTATTAAAATTGAAAGTAAAGTATGTATATGATATGAGTAACACTATCACTAGAAAGTGAAATTCGTCTTGATCTGATTTAATTTTTTTGAATGATGTAAATTTTATTATTCAAATTTACAACCAAAACAAGTATAGAAATATTTTGTCCAAGTTAATTTATTCTGAATCGTACAAGATGAAACGAAGCGGTTAACTTGTAGGGTAACCTGCGATAGATGATTTATAATTTCAGTGTACGAAGAGGTTAAGATATACGTAGATCCTTCGTACATATTTTTATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTTTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCATGTAAGTTCTAAGGGTGGCCTTTTATACTATTCTATTTTGAAGCTTGACTTATATTGATTGATACAGGACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAGGTTAGCATCCTGTTCCTCCTTTATCTACCCAAAAATATAAATTAAGTAAATGCGTTTTTTTAATAGTTCGATGGAGTAGTTATCAATTCAACATACTGTGACATATATCTCCTAGCTATCAAGATAGTTAAATTTTTTGGTTCAAATCTCACCATCACATATTTTTGGCAATTGGCCACTACATGTGAAACGATTTGTTTAGTCAAATTATAATTAAGTAACTAAAGAAGATTCCCTCTAAAGTGATTTAAGTTTTTAATTATATTGGAACATATTCACCACTATAGCATCAAATTCTTCACAATATCTACCTTTAAACCCTGAAAAGAAGAGAATTTCTTTTTTATCAACGAGCGTTTTCTTTAAGCAAAATTTTATAATTTTGTGGGATTCGATTACTTGCTGAGCAATAAGTGCATGTCCTGCGTTGTTGGGTACGTAAATGAAGGTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGA-GGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCG</genome_strand>
        <mrna_strand>CGCTTATTTTGCCTGTCGCCGGCCGATAAAACTTTTTTTTTCTGATCCGGAGGTCGAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCAAACGGCTTCTATTTAATCTGAGAAACGGGAAAACCCCTGATCTGGTGAAGGTGGATTTCGCGGTGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGAGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAAGTCTCTTTTTTCATACAGATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAGACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCCAGAGGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E727404" ref_strand="+" ref_description="SGN-E727404 [LA14CD06]">
      <seq>aaaacagcacatatatatagagacaaaatcacataatacgccctcgccggaatcttattttcactgtcgccggccgttaaaactttttttttctagttcggaggtcaaataattaacctccgatcggaagaagtagttattctaactgcttctatttaatctgaaaacgggaaaacccctgagctggttaaggtggatttcgtgatgggattttgtatttgtcctttggaaactcctgctagattactgtggagtactagtttcttccgccacaagcttatgctcttctaaaacttagtcaactctcttttttcatacacatccctgctaaaaaagaagaactctgtgctggagtttttgttttcctttttctgtttcgccggaaacatataaataatcttctgtgtgtaaataggcgattttccagatagttgaaaatatgggatctgggcatatatttttcgacccgtcgtcgtgtcacggcaacatgctgttccttgggagcggagatcctgttttccgaggaccaagatcgacgatgatgaagatggaggactcctcgaagaggcgacccttctttacctcgccggaggatctatatgacgaggaatactacgacgagcagtcaccggagaagaagcgccgtctcactcctgagcaggtgcacttgttggagaagagctttgagacagaaaacaagctggagcccgagcgcaaaacccagctggccaaaaagctggggctgcagcccagacaggtggctgtatggttccaaaaccgccgtgcccggtggaagaacaagcagctcgagagggattatgatcagctcaaatcctcttatgactcccttctctctgattttgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="48234" stop="45771"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47934" g_stop="47411" g_length="524"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="524" r_length="524" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47410" i_stop="46861" i_length="550">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46860" g_stop="46724" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="661" r_length="137" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46723" i_stop="46276" i_length="448">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46275" g_stop="46071" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="662" r_stop="866" r_length="205" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E727404" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>866</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E727404" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47934" e_stop="47411"/>
          <exon e_start="46860" e_stop="46724"/>
          <exon e_start="46275" e_stop="46071"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAGGTATTCTCTAATCATTATGTTCTCTATTCCAATTACTTATATTACTATGAAAATATAATTTAAGAACTTTTTTGATGACTCAATTCCACTATTAAAATTGAAAGTAAAGTATGTATATGATATGAGTAACACTATCACTAGAAAGTGAAATTCGTCTTGATCTGATTTAATTTTTTTGAATGATGTAAATTTTATTATTCAAATTTACAACCAAAACAAGTATAGAAATATTTTGTCCAAGTTAATTTATTCTGAATCGTACAAGATGAAACGAAGCGGTTAACTTGTAGGGTAACCTGCGATAGATGATTTATAATTTCAGTGTACGAAGAGGTTAAGATATACGTAGATCCTTCGTACATATTTTTATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTTTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCATGTAAGTTCTAAGGGTGGCCTTTTATACTATTCTATTTTGAAGCTTGACTTATATTGATTGATACAGGACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAGGTTAGCATCCTGTTCCTCCTTTATCTACCCAAAAATATAAATTAAGTAAATGCGTTTTTTTAATAGTTCGATGGAGTAGTTATCAATTCAACATACTGTGACATATATCTCCTAGCTATCAAGATAGTTAAATTTTTTGGTTCAAATCTCACCATCACATATTTTTGGCAATTGGCCACTACATGTGAAACGATTTGTTTAGTCAAATTATAATTAAGTAACTAAAGAAGATTCCCTCTAAAGTGATTTAAGTTTTTAATTATATTGGAACATATTCACCACTATAGCATCAAATTCTTCACAATATCTACCTTTAAACCCTGAAAAGAAGAGAATTTCTTTTTTATCAACGAGCGTTTTCTTTAAGCAAAATTTTATAATTTTGTGGGATTCGATTACTTGCTGAGCAATAAGTGCATGTCCTGCGTTGTTGGGTACGTAAATGAAGGTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACT</genome_strand>
        <mrna_strand>AAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTACCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGAACAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E700601" ref_strand="+" ref_description="SGN-E700601 [FA13CD06]">
      <seq>accaaacagcacatatatatagagacaaaatcacataatacgccctcgccggaatcttattttcactgtcgccggccgttaaaactttttttttctagttcggaggtcaaataattaacctccgatcggaagaagtagttattctaactgcttctatttaatctgaaaacgggaaaacccctgagctggttaaggtggatttcgtgatgggattttgtatttgtcctttggaaactcctgctagattactgtggagtactagtttcttccgccacaagcttatgctcttctaaaacttagtcaactctcttttttcatacacatccctgctaaaaaagaagaactctgtgctggagtttttgttttcctttttctgtttcgccggaaacatataaataatcttctgtgtgtaaataggcgattttccagatagttgaaaatatgggatctgggcatatatttttcgacccgtcgtcgtgtcacggcaacatgctgttccttgggagcggagatcctgttttccgaggaccaagatcgacgatgatgaagatggaggactcctcgaagaggcgacccttctttagctcgccggaggatctatatgacgaggaatactacgacgagcagtcaccggagaagaagcgccgtctcactcctgagcaggtgcacttgttggagaagagctttgagacagaaaacaagctggagcccgagcgcaaaacccagctggccaaaaagctggggctgcagcccagacaggtggctgtatggttcaaaaccgccgtgcccggtggaagacaagcagctcgagagggatatgatcagctcaaatcctcttatgactcccttctctctgattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="48236" stop="45776"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47936" g_stop="47411" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47410" i_stop="46861" i_length="550">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46860" g_stop="46724" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="663" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46723" i_stop="46276" i_length="448">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46275" g_stop="46076" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="664" r_stop="860" r_length="197" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E700601" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>863</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E700601" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47936" e_stop="47411"/>
          <exon e_start="46860" e_stop="46724"/>
          <exon e_start="46275" e_stop="46076"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAGGTATTCTCTAATCATTATGTTCTCTATTCCAATTACTTATATTACTATGAAAATATAATTTAAGAACTTTTTTGATGACTCAATTCCACTATTAAAATTGAAAGTAAAGTATGTATATGATATGAGTAACACTATCACTAGAAAGTGAAATTCGTCTTGATCTGATTTAATTTTTTTGAATGATGTAAATTTTATTATTCAAATTTACAACCAAAACAAGTATAGAAATATTTTGTCCAAGTTAATTTATTCTGAATCGTACAAGATGAAACGAAGCGGTTAACTTGTAGGGTAACCTGCGATAGATGATTTATAATTTCAGTGTACGAAGAGGTTAAGATATACGTAGATCCTTCGTACATATTTTTATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTTTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCATGTAAGTTCTAAGGGTGGCCTTTTATACTATTCTATTTTGAAGCTTGACTTATATTGATTGATACAGGACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAGGTTAGCATCCTGTTCCTCCTTTATCTACCCAAAAATATAAATTAAGTAAATGCGTTTTTTTAATAGTTCGATGGAGTAGTTATCAATTCAACATACTGTGACATATATCTCCTAGCTATCAAGATAGTTAAATTTTTTGGTTCAAATCTCACCATCACATATTTTTGGCAATTGGCCACTACATGTGAAACGATTTGTTTAGTCAAATTATAATTAAGTAACTAAAGAAGATTCCCTCTAAAGTGATTTAAGTTTTTAATTATATTGGAACATATTCACCACTATAGCATCAAATTCTTCACAATATCTACCTTTAAACCCTGAAAAGAAGAGAATTTCTTTTTTATCAACGAGCGTTTTCTTTAAGCAAAATTTTATAATTTTGTGGGATTCGATTACTTGCTGAGCAATAAGTGCATGTCCTGCGTTGTTGGGTACGTAAATGAAGGTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTT</genome_strand>
        <mrna_strand>ACCAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTT-CAAAACCGCCGTGCCCGGTGGAAGA-CAAGCAGCTCGAGAGGGA-TATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E319757" ref_strand="+" ref_description="SGN-E319757 [cTOB-12-K6]">
      <seq>ttagtcaactctcttttttcatacacatccctgctaaaaaagaagaactctgtgctggagtttttgttttcctttttctgtttcgccggaaacatataaataatcttctgtgtgtaaataggcgattttccagatagttgaaaatatgggatctgggcatatatttttcgacccgtcgtcgtgtcacggcaacatgctgttccttgggagcggagatcctgttttccgaggaccaagatcgacgatgatgaagatggaggactcctcgaagaggcgacccttctttagctcgccggaggatctatatgacgaggaatactacgacgagcagtcaccggagaagaagcgccgtctcactcctgagcaggtgcacttgttggagaagagctttgagacagaaaacaagctggagcccgagcgcaaaacccagctggccaaaaagctggggctgcagcccagacaggtggctgtatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="47940" stop="45869"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47640" g_stop="47411" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="230" r_length="230" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47410" i_stop="46861" i_length="550">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46860" g_stop="46724" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="367" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46723" i_stop="46276" i_length="448">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46275" g_stop="46169" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="474" r_length="107" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E319757" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>474</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E319757" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47640" e_stop="47411"/>
          <exon e_start="46860" e_stop="46724"/>
          <exon e_start="46275" e_stop="46169"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAGGTATTCTCTAATCATTATGTTCTCTATTCCAATTACTTATATTACTATGAAAATATAATTTAAGAACTTTTTTGATGACTCAATTCCACTATTAAAATTGAAAGTAAAGTATGTATATGATATGAGTAACACTATCACTAGAAAGTGAAATTCGTCTTGATCTGATTTAATTTTTTTGAATGATGTAAATTTTATTATTCAAATTTACAACCAAAACAAGTATAGAAATATTTTGTCCAAGTTAATTTATTCTGAATCGTACAAGATGAAACGAAGCGGTTAACTTGTAGGGTAACCTGCGATAGATGATTTATAATTTCAGTGTACGAAGAGGTTAAGATATACGTAGATCCTTCGTACATATTTTTATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTTTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCATGTAAGTTCTAAGGGTGGCCTTTTATACTATTCTATTTTGAAGCTTGACTTATATTGATTGATACAGGACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAGGTTAGCATCCTGTTCCTCCTTTATCTACCCAAAAATATAAATTAAGTAAATGCGTTTTTTTAATAGTTCGATGGAGTAGTTATCAATTCAACATACTGTGACATATATCTCCTAGCTATCAAGATAGTTAAATTTTTTGGTTCAAATCTCACCATCACATATTTTTGGCAATTGGCCACTACATGTGAAACGATTTGTTTAGTCAAATTATAATTAAGTAACTAAAGAAGATTCCCTCTAAAGTGATTTAAGTTTTTAATTATATTGGAACATATTCACCACTATAGCATCAAATTCTTCACAATATCTACCTTTAAACCCTGAAAAGAAGAGAATTTCTTTTTTATCAACGAGCGTTTTCTTTAAGCAAAATTTTATAATTTTGTGGGATTCGATTACTTGCTGAGCAATAAGTGCATGTCCTGCGTTGTTGGGTACGTAAATGAAGGTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATG</genome_strand>
        <mrna_strand>TTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E333531" ref_strand="+" ref_description="SGN-E333531 [cTOD-22-C19]">
      <seq>caaaacagcacatatatatagagacaaaatcacataatacgccctcgccggaatcttattttcactgtcgccggccgttaaaactttttttttctagttcggaggtcaaataattaacctccgatcggaagaagtagttattctaactgcttctatttaatctgaaaacgggaaaacccctgagctggttaaggtggatttcgtgatgggattttgtatttgtcctttggaaactcctgctagattactgtggagtactagtttcttccgccacaagcttatgctcttctaaaacttagtcaactctcttttttcatacacatccctgctaaaaaagaagaactctgtgctggagtttttgttttcctttttctgtttcgccggaaacatataaataatcttctgtgtgtaaataggcgattttccagatagttgaaaatatgggatctgggcatatatttttcgacccgtcgtcgtgtcacggcaacatgctgttccttgggagcggagatcctgttttccgaggaccaagatcgacgatgatgaagatggaggactcctcgaagaggcgacccttctttagctcgccggaggatctatatgacgaggaatactacgacgagcagtcaccggagaagaagcgccgtctcactcctgagcaggttagcatcctgttcctcctttatctacccaaaatataaattaagtaaatgcgttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="48235" stop="46363"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47935" g_stop="47411" g_length="525"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="525" r_length="525" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47410" i_stop="46861" i_length="550">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46860" g_stop="46663" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="526" r_stop="722" r_length="197" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E333531" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>723</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E333531" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47935" e_stop="47411"/>
          <exon e_start="46860" e_stop="46663"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAGGTATTCTCTAATCATTATGTTCTCTATTCCAATTACTTATATTACTATGAAAATATAATTTAAGAACTTTTTTGATGACTCAATTCCACTATTAAAATTGAAAGTAAAGTATGTATATGATATGAGTAACACTATCACTAGAAAGTGAAATTCGTCTTGATCTGATTTAATTTTTTTGAATGATGTAAATTTTATTATTCAAATTTACAACCAAAACAAGTATAGAAATATTTTGTCCAAGTTAATTTATTCTGAATCGTACAAGATGAAACGAAGCGGTTAACTTGTAGGGTAACCTGCGATAGATGATTTATAATTTCAGTGTACGAAGAGGTTAAGATATACGTAGATCCTTCGTACATATTTTTATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTTTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCATGTAAGTTCTAAGGGTGGCCTTTTATACTATTCTATTTTGAAGCTTGACTTATATTGATTGATACAGGACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAGGTTAGCATCCTGTTCCTCCTTTATCTACCCAAAAATATAAATTAAGTAAATGCGTTTTTTT</genome_strand>
        <mrna_strand>CAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAGGTTAGCATCCTGTTCCTCCTTTATCTACCC-AAAATATAAATTAAGTAAATGCGTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E321961" ref_strand="+" ref_description="SGN-E321961 [cTOB-29-K2]">
      <seq>acaaaacagcacatatatatagagacaaaatcacataatacgccctcgccggaatcttattttcactgtcgccggccgttaaaactttttttttctagttcggaggtcaaataattaacctccgatcggaagaagtagttattctaactgcttctatttaatctgaaaacgggaaaacccctgagctggttaaggtggatttcgtgatgggattttgtatttgtcctttggaaactcctgctagattactgtggagtactagtttcttccgccacaagcttatgctcttctaaaacttagtcaactctcttttttcatacacatccctgctaaaaaagaagaactctgtgctggagtttttgttttcctttttctgtttcgccggaaacatataaataatcttctgtgtgtaaataggcgattttccagatagttgaaaatatgggatctgggcatatatttttcgacccgtcgtcgtgtcacggcaacatgctgttccttgggagcggagatcctgttttccgaggaccaagatcgacgatgatgaagatggaggactcctcgaagaggcgacccttctttagctcgccggaggatctatatgacgaggaatactacgacgagcagtcaccggagaaagagcgccgtctcactcctgagcaggtgcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="48236" stop="46422"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47936" g_stop="47411" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47410" i_stop="46861" i_length="550">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46860" g_stop="46728" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="659" r_length="133" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E321961" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E321961" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47936" e_stop="47411"/>
          <exon e_start="46860" e_stop="46728"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAGGTATTCTCTAATCATTATGTTCTCTATTCCAATTACTTATATTACTATGAAAATATAATTTAAGAACTTTTTTGATGACTCAATTCCACTATTAAAATTGAAAGTAAAGTATGTATATGATATGAGTAACACTATCACTAGAAAGTGAAATTCGTCTTGATCTGATTTAATTTTTTTGAATGATGTAAATTTTATTATTCAAATTTACAACCAAAACAAGTATAGAAATATTTTGTCCAAGTTAATTTATTCTGAATCGTACAAGATGAAACGAAGCGGTTAACTTGTAGGGTAACCTGCGATAGATGATTTATAATTTCAGTGTACGAAGAGGTTAAGATATACGTAGATCCTTCGTACATATTTTTATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTTTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCATGTAAGTTCTAAGGGTGGCCTTTTATACTATTCTATTTTGAAGCTTGACTTATATTGATTGATACAGGACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGA</genome_strand>
        <mrna_strand>ACAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAAGAGCGCCGTCTCACTCCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E327132" ref_strand="+" ref_description="SGN-E327132 [cTOC-18-O19]">
      <seq>atatatatagagacaaaatcacataatacgccctcgccggaatcttattttcactgtcgccggccgttaaaactttttttttctagttcggaggtcaaataattaacctccgatcggaagaagtagttattctaactgcttctatttaatctgaaaacgggaaaacccctgagctggttaaggtggatttcgtgatgggattttgtatttgtcctttggaaactcctgctagattactgtggagtactagtttcttccgccacaagcttatgctcttctaaaacttagtcaactctcttttttcatacacatccctgctaaaaaagaagaactctgtgctggagtttttgttttcctttttctgtttcgccggaaacatataaataatcttctgtgtgtaaataggcgattttccagatagttgaaaatatgggatctgggcatatatttttcgacccgtcgtcgtgtcacggcaacatgctgttccttgggagcggagatcctgttttccgaggaccaagatcgacgatgatgaagatggaggactcctcgaagaggcgacccttctttagctcgccggaggatctatatgacgaggaatactacgacgagcagtcaccggagaagaagcgccgtctcactcctgagcaggtgcacttgttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="48224" stop="46422"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47924" g_stop="47411" g_length="514"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="514" r_length="514" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47410" i_stop="46861" i_length="550">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46860" g_stop="46728" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="515" r_stop="647" r_length="133" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E327132" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E327132" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47924" e_stop="47411"/>
          <exon e_start="46860" e_stop="46728"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAGGTATTCTCTAATCATTATGTTCTCTATTCCAATTACTTATATTACTATGAAAATATAATTTAAGAACTTTTTTGATGACTCAATTCCACTATTAAAATTGAAAGTAAAGTATGTATATGATATGAGTAACACTATCACTAGAAAGTGAAATTCGTCTTGATCTGATTTAATTTTTTTGAATGATGTAAATTTTATTATTCAAATTTACAACCAAAACAAGTATAGAAATATTTTGTCCAAGTTAATTTATTCTGAATCGTACAAGATGAAACGAAGCGGTTAACTTGTAGGGTAACCTGCGATAGATGATTTATAATTTCAGTGTACGAAGAGGTTAAGATATACGTAGATCCTTCGTACATATTTTTATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTTTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCATGTAAGTTCTAAGGGTGGCCTTTTATACTATTCTATTTTGAAGCTTGACTTATATTGATTGATACAGGACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGA</genome_strand>
        <mrna_strand>ATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E267132" ref_strand="+" ref_description="SGN-E267132 [cLEI-4-H8]">
      <seq>aaaacccctgagctggttaaggtggatttcgtgatgggattttgtatttgtcctttggaaactcctgctagattactgtggagtactagtttcttccgccacaagcttatgctcttctaaaacttagtcaactctcttttttcatacacatccctgctaaaaaagaagaactctgtgctggagtttttgttttcctttttctgtttcgccggaaacatataaataatcttctgtgtgtaaataggcgattttccagatagttgaaaatatgggatctgggcatatatttttcgacccgtcgtcgtgtcacggcaacatgctgttccttgggagcggagatcctgttttccgaggaccaagatcgacgatgatgaagatggaggactcctcgaagaggcgacccttctttagctcgccggaggatctatatgacgaggaatactacgacgagcagtcaccggagaagaagcgccgtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="48063" stop="46437"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47763" g_stop="47411" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="353" r_length="353" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47410" i_stop="46861" i_length="550">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46860" g_stop="46737" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="477" r_length="124" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E267132" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267132" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47763" e_stop="47411"/>
          <exon e_start="46860" e_stop="46737"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAGGTATTCTCTAATCATTATGTTCTCTATTCCAATTACTTATATTACTATGAAAATATAATTTAAGAACTTTTTTGATGACTCAATTCCACTATTAAAATTGAAAGTAAAGTATGTATATGATATGAGTAACACTATCACTAGAAAGTGAAATTCGTCTTGATCTGATTTAATTTTTTTGAATGATGTAAATTTTATTATTCAAATTTACAACCAAAACAAGTATAGAAATATTTTGTCCAAGTTAATTTATTCTGAATCGTACAAGATGAAACGAAGCGGTTAACTTGTAGGGTAACCTGCGATAGATGATTTATAATTTCAGTGTACGAAGAGGTTAAGATATACGTAGATCCTTCGTACATATTTTTATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTTTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCATGTAAGTTCTAAGGGTGGCCTTTTATACTATTCTATTTTGAAGCTTGACTTATATTGATTGATACAGGACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCT</genome_strand>
        <mrna_strand>AAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E207270" ref_strand="+" ref_description="SGN-E207270 [cLEC-30-I17]">
      <seq>caaaacagcacatatatatagagacaaaatcacataatacgccctcgccggaatcttattttcactgtcgccggccgttaaaactttttttttctagttcggaggtcaaataattaacctccgatcggaagaagtagttattctaactgcttctatttaatctgaaaacgggaaaacccctgagctggttaaggtggatttcgtgatgggattttgtatttgtcctttggaaactcctgctagattactgtggagtactagtttcttccgccacaagcttatgctcttctaaaacttagtcaactctcttttttcatacacatccctgctaaaaaagaagaactctgtgctggagtttttgttttcctttttctgtttcgccggaaacatataaataatcttctgtgtgtaaataggcgattttccagatagttgaaaatatgggatctgggcatatatttttcgacccgtcgtcgtgtcacggcaacatgctgttccttgggagcggagatcctgttttccgaggaccaagatcgacgatgatgaagatggaggactcctcgaagaggcgacccttctttagctcgccggaggatctatatgacgaggaatactacgacgagcagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="48235" stop="46459"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47935" g_stop="47411" g_length="525"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="525" r_length="525" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47410" i_stop="46861" i_length="550">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46860" g_stop="46759" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="526" r_stop="627" r_length="102" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E207270" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>627</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E207270" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47935" e_stop="47411"/>
          <exon e_start="46860" e_stop="46759"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAGGTATTCTCTAATCATTATGTTCTCTATTCCAATTACTTATATTACTATGAAAATATAATTTAAGAACTTTTTTGATGACTCAATTCCACTATTAAAATTGAAAGTAAAGTATGTATATGATATGAGTAACACTATCACTAGAAAGTGAAATTCGTCTTGATCTGATTTAATTTTTTTGAATGATGTAAATTTTATTATTCAAATTTACAACCAAAACAAGTATAGAAATATTTTGTCCAAGTTAATTTATTCTGAATCGTACAAGATGAAACGAAGCGGTTAACTTGTAGGGTAACCTGCGATAGATGATTTATAATTTCAGTGTACGAAGAGGTTAAGATATACGTAGATCCTTCGTACATATTTTTATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTTTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCATGTAAGTTCTAAGGGTGGCCTTTTATACTATTCTATTTTGAAGCTTGACTTATATTGATTGATACAGGACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGT</genome_strand>
        <mrna_strand>CAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E308767" ref_strand="+" ref_description="SGN-E308767 [cLEZ-11-K14]">
      <seq>caaaacagcacatatatatagagacaaaatcacataatacgccctcgccggaatcttattttcactgtcgccggccgttaaaactttttttttctagttcggaggtcaaataattaacctccgatcggaagaagtagttattctaactgcttctatttaatctgaaaacgggaaaacccctgagctggttaaagtggatttcgtgatgggattttgtatttgtcctttggaaactcctgctagattactggggagtactagtttcttccgccacaagcttatgctcttctaaaacttagtcaactctcttttttcatacacatccctgctaaaaaagaagaactctgtgctggagtttttgttttcctttttctgtttcgccggaaacatataaataatcttctgtgtgtaaataggcgattttccagatagttgaaaatatgggatctgggcatatatttttcgacccgtcgtcgagtcacggcaacatgctgttccttgggagcggagatcctgttttccgaggaccaagatcgacgatgatgaagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="48235" stop="46536"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47935" g_stop="47411" g_length="525"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="525" r_length="525" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47410" i_stop="46861" i_length="550">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46860" g_stop="46836" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="526" r_stop="550" r_length="25" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E308767" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>550</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E308767" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47935" e_stop="47411"/>
          <exon e_start="46860" e_stop="46836"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAGGTATTCTCTAATCATTATGTTCTCTATTCCAATTACTTATATTACTATGAAAATATAATTTAAGAACTTTTTTGATGACTCAATTCCACTATTAAAATTGAAAGTAAAGTATGTATATGATATGAGTAACACTATCACTAGAAAGTGAAATTCGTCTTGATCTGATTTAATTTTTTTGAATGATGTAAATTTTATTATTCAAATTTACAACCAAAACAAGTATAGAAATATTTTGTCCAAGTTAATTTATTCTGAATCGTACAAGATGAAACGAAGCGGTTAACTTGTAGGGTAACCTGCGATAGATGATTTATAATTTCAGTGTACGAAGAGGTTAAGATATACGTAGATCCTTCGTACATATTTTTATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTTTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCATGTAAGTTCTAAGGGTGGCCTTTTATACTATTCTATTTTGAAGCTTGACTTATATTGATTGATACAGGACCAAGATCGACGATGATGAAGAT</genome_strand>
        <mrna_strand>CAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAAGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGGGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGAGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAAGATCGACGATGATGAAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E697835" ref_strand="+" ref_description="SGN-E697835 [FA04BG03]">
      <seq>ctgcttctatttaatctgaaaacgggaaaacccctgagctggttaaggtggatttcgcgatgggattttgtatttgtcctttggaaactcctgctagattactgtggagtactactttcttccgccacaaccttatgctcttctaaaacttactcaactctcttttttcatacacatccctgctaaaaaagaacaactctgtgctggagtttttgttttcctttttctgtttccccggaaacatataaataatcttctgtgtgtaaataggcgattttccagatagttgaaaatatgggatctgggcttatatttttcgacccgtcgccccgccaccgcaacatgctgttccctgggagcggagatcctgctttccgacgaccaagatcgacgatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="48089" stop="46542"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47789" g_stop="47411" g_length="379"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="379" r_length="379" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47410" i_stop="46861" i_length="550">
            <donor d_prob="1.000" d_score="0.86"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46860" g_stop="46842" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="380" r_stop="398" r_length="19" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E697835" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>398</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E697835" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47789" e_stop="47411"/>
          <exon e_start="46860" e_stop="46842"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAGGTATTCTCTAATCATTATGTTCTCTATTCCAATTACTTATATTACTATGAAAATATAATTTAAGAACTTTTTTGATGACTCAATTCCACTATTAAAATTGAAAGTAAAGTATGTATATGATATGAGTAACACTATCACTAGAAAGTGAAATTCGTCTTGATCTGATTTAATTTTTTTGAATGATGTAAATTTTATTATTCAAATTTACAACCAAAACAAGTATAGAAATATTTTGTCCAAGTTAATTTATTCTGAATCGTACAAGATGAAACGAAGCGGTTAACTTGTAGGGTAACCTGCGATAGATGATTTATAATTTCAGTGTACGAAGAGGTTAAGATATACGTAGATCCTTCGTACATATTTTTATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTTTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCATGTAAGTTCTAAGGGTGGCCTTTTATACTATTCTATTTTGAAGCTTGACTTATATTGATTGATACAGGACCAAGATCGACGATGAT</genome_strand>
        <mrna_strand>CTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGCGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTACTTTCTTCCGCCACAACCTTATGCTCTTCTAAAACTTACTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAACAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCCCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCTTATATTTTTCGACCCGTCGCCCCGCCACCGCAACATGCTGTTCCCTGGGAGCGGAGATCCTGCTTTCCGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAAGATCGACGATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E365775" ref_strand="+" ref_description="SGN-E365775 [cLPT-8-A15]">
      <seq>gacaaaatcacataatacgccctcgccggaatcttattttcactgtcgccggccgttaaaacttcttttttttttctagttcggaggtcaaataattaacctccgatcggaagaagtagttattctaactgcttctatttaatctgaaaacgggaaaacccctgagctgggtaaggtggatttcgtgatgggattttgtatttgtcctttggaaactcctgctagattactgtggagtactagtttcttccgccacaagcttatgctcttctaaaacttagtcaactctcttttttcatacacatccctgctaaaaaagaagaactctgtgctggagtttttgttttcgttttctgtttcgccggaaacatatataaataatcttctgtgtgtaaataggcgattttccagatagttgaaaatatgggatctgggcatatatttttcgacccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="48213" stop="47166"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47913" g_stop="47466" g_length="448"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="453" r_length="453" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E365775" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>448</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E365775" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47913" e_stop="47466"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAA---C-TTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATAT--AAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCG</genome_strand>
        <mrna_strand>GACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTCTTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGGTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTT-CGTTTTCTGTTTCGCCGGAAACATATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E207269" ref_strand="+" ref_description="SGN-E207269 [cLEC-30-I13]">
      <seq>catatatatagagacaaaatcacataatacgccctcgccggaatcttattttcactgtcgccggccgttaaaactttttttttctagttcggaggtcaaataattaacctccgatcggaagaagtagttattctaactgcttctatttaatctgaaaacgggaaaacccctgagctggttaaggtggatttcgtgatgggattttgtatttgtcctttggaaactcctgctagattactgtggagtactagtttcttccgccacaagcttatgctcttctaaaacttagtcaactctcttttttcatacacatccctgctaaaaaagaagaactctgtgctggagtttttgttttcctttttctgtttcgccggaaacatataaataatcttctgggtgtaaataggcgattttccagatagttgaaaatatgggatctgggcatatatttttcgacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="48225" stop="47168"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47925" g_stop="47468" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="458" r_length="458" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E207269" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>458</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E207269" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47925" e_stop="47468"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACC</genome_strand>
        <mrna_strand>CATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGGGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E318784" ref_strand="+" ref_description="SGN-E318784 [cTOB-11-B23]">
      <seq>acaaaacatcacatatatatagagacagggtcacataatacgccctcgccggaatcttattttcactgtcgccggccgttaaaactttttttttctagttcggaggtcaaataattaacctccgatcggaagaagtagttattctaactgcttctatttaatctgaaaacgggaaaacccctgagctggttaaggtggatttcgtgatgggattttgtatttgtcctttggaaactcctgctagattactgtggagtactagtttcttccgccacaagcttatgctcttctaaaacttagtcaactctcttttttcatacacatccctgctaaaaaagaagaactctgtgctggagtttttgttttcctttttctgtttcgccggaaacatataaataatcttgtgtgtgtaaataggcgattttccagattgttgaaaatatgggatctgggcatatatttttcgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="48236" stop="47169"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47936" g_stop="47469" g_length="468"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="468" r_length="468" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E318784" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>468</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E318784" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47936" e_stop="47469"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGAC</genome_strand>
        <mrna_strand>ACAAAACATCACATATATATAGAGACAGGGTCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTGTGTGTGTAAATAGGCGATTTTCCAGATTGTTGAAAATATGGGATCTGGGCATATATTTTTCGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E267889" ref_strand="+" ref_description="SGN-E267889 [cLEI-12-J13]">
      <seq>cacatatatatagagacaaaatcacataatacgccctcgccggaatcttattttcactgtcgccggccgttaaaactttttttttctagttcggaggtcaaataattaacctccgatcggaagaagtagttattctaactgcttctatttaatctgaaaacgggaaaacccctgagctggttaaggtggatttcgtgatgggattttgtatttgtcctttggaaactcctgctagattactgtggagtactagtttcttccgccacaagcttatgctcttctaaaacttagtcaactctcttttttcatacacatccctgctaaaaaagaagaactctgtgctggagtttttgttttcctttttctgtttcgccggaaacatataaataatcttctgtgtgtaaatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="48227" stop="47220"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47927" g_stop="47520" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="408" r_length="408" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E267889" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>408</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267889" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47927" e_stop="47520"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAG</genome_strand>
        <mrna_strand>CACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E724262" ref_strand="+" ref_description="SGN-E724262 [FC23CC09]">
      <seq>cggaatcttattttcactgtcgccggccgttaaaactttttttttctagttcggaggtcaaataattaacctccgatcggaagaagtagttattctaactgcttctatttaatctgaaaacgggaaaacccctgagctggttaagggggatttcgtgatgggattttgtatttgtcctttggaaactcctgctagattactgtggagtactagtttcttccgccacaagcttatgctcttctaaaacttaatcaactctcttttttcatacacctccctgctaaaaaaaaagaactctgtgctggagtttttgttttcctttttctgtttcgccggaaacatataaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="48187" stop="47240"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47887" g_stop="47540" g_length="348"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="348" r_length="348" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E724262" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>348</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E724262" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47887" e_stop="47540"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAAT</genome_strand>
        <mrna_strand>CGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGGGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAATCAACTCTCTTTTTTCATACACCTCCCTGCTAAAAAAAAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E297411" ref_strand="+" ref_description="SGN-E297411 [cLEW-14-N22]">
      <seq>caaaacagcacatatatatagagacaaaatcacataatacgccctcgccggaatcttattttcactgtcgccggccgttaaaactttctttatttctagttcggaggtcaaataattaacctccgatcggaagaagtagttattctaactgcttctatttaatctgaaaacgggaaaacccctgagctggttaaggtggatttcgcgatgggattttgtatttgtcctttggaaactcctgctagattactgtggagtactagtttcttccgccacaagcttatgctcttctaaaacttagtcaactctcttttttcatacacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="48235" stop="47313"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47935" g_stop="47613" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="325" r_length="325" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E297411" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>323</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E297411" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47935" e_stop="47613"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTT-TTT-TTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACAT</genome_strand>
        <mrna_strand>CAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTCTTTATTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGCGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E365709" ref_strand="+" ref_description="SGN-E365709 [cLPT-8-A18]">
      <seq>agcatatatatatacggacaaaatcacataatacgccctcgccggaatcttattttcactgtcgccggccgttaaaacttcttttttttttctagttcggaggtcaaataattaacctccgatcggaagaagaagctattctaactgcttctatttaatctgaaaacgggaaaacccctgagctgggtaagggggatttcgtgatgggattttgtatttgtcctttggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="48229" stop="47403"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47929" g_stop="47703" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="231" r_length="231" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E365709" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>227</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E365709" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47929" e_stop="47703"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAA---C-TTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAA</genome_strand>
        <mrna_strand>AGCATATATATATACGGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTCTTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGAAGCTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGGTAAGGGGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E318321" ref_strand="+" ref_description="SGN-E318321 [cTOA-29-C9]">
      <seq>tctggtattccaattttatccttatctctttctactctcctcctgtccattacacctattttcaatctcaatttcttcattaataacagttgcattttgtcaatttttttccctccaaaccccaaatgtcctctagaattgcttgactgtgtaaacaaactagttgtaaattcatcaatggcagcatctgtttcctgccactatttttcttccccattaacaacttccaccaaatccatcaagcctaagctcaattacagccatttcgcacctgctcttagtaaaggatcgatccgccattttgttccactatgttcttcacaacgctcgcttccttctgaatcggaatgccaagacaaagagaaagattggtttttgtcattgaagaaatgtgcagctgcagtagcattgtcggttagtttgattagtggactacctggatcgcaatggttgggtcctgctcatgcgagcaccccagcattgccagatgtctctgtattgatctcagggccaccaattaaggatccaggggcgttattgaggtatgcattgcctat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="63469" stop="64941"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63769" g_stop="64131" g_length="363"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="363" r_length="363" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64132" i_stop="64447" i_length="316">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64448" g_stop="64641" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="557" r_length="194" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E318321" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E318321" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63769" e_stop="64131"/>
          <exon e_start="64448" e_stop="64641"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGGTATTCCAATTTTATCCTTATCTCTTTCTACTCTCCTCCTGTCCATTACACCTATTTTCAATCTCAATTTCTTCATTAATAACAGTTGCATTTTGTCAATTTTTTTCCCTCCAAACCCCAAATGTCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAGGCAAGTTCTATTATTCTCCTTCACTTTTTTTTTTATAAAAAAAATAGACGTTCATTAGTTCGAAATGAGTTAATGGAAATTCAAATATCTAAATGAGAAGTTTGAGTGTACAATTGCATCTATTACTTCGTACTTTAGTATAAAAAAATCGACTATATGCATATGTAGTTTAAGCCGAATCCACTGCCTCAGTTATACAATGTTAGCATTTGTAAGTAATGACAAGACTGCAGTTGGTAGTTCTTTCTAAAGTTCTCAAGTGTGTGTTCTTAATAAGTAGGAACTTATATGATGAAGATTTTTCCCAAACCTGCAGAAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTAT</genome_strand>
        <mrna_strand>TCTGGTATTCCAATTTTATCCTTATCTCTTTCTACTCTCCTCCTGTCCATTACACCTATTTTCAATCTCAATTTCTTCATTAATAACAGTTGCATTTTGTCAATTTTTTTCCCTCCAAACCCCAAATGTCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAG............................................................................................................................................................................................................................................................................................................................AAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E707272" ref_strand="+" ref_description="SGN-E707272 [FA32CB08]">
      <seq>ctctatttcttcattaataacagttgcattttgtcaatttttttccctccaaaccccaaatgtcctctagaattgcttgactgtgtaaacaaactagttgtaaattcatcaatggcagcatctgtttcctgccactatttttcttccccattaacaacttccaccaaatccatcaagcctaagctcaattacagccatttcgcacctgctcttagtaaaggatcgatccgccattttgttccactatgttcttcacaacgctcgcttccttctgaatcggaatgccaagacaaagagaaagattggtttttgtcattgaagaaatgtgcagctgcagtagcattgtcggttagtttgattagtggactacctggatcgcaatggttgggtcctgctcatgcgagcaccccagcattgccagatgtctctgtattgatctcagggccaccaattaaggatccaggggcgttattgaggtatgcattgcctatagacaacaaggcgataagagaagtccaaaaaccccttgaagatattactgatagtctcaagattgctggtgtcaaggcgcttgactctgttgaaagaaatacaagacaagcatctcgagctctcaaggaagggaaaaccttgattatttcaggagtagctaagtcaaagactgaccacgctattgaattgctaaacaaactagaagctgggttaggtgagcttcaacaaattgttgaagacaggactcgagatgctgttgcacctaaacagaaggaattgcttaactatgttggaggtgttgaagaggatatggtggatggattcccatatgaagtacctgaagaatatcaaaatatgcctttactgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="63535" stop="66072"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63835" g_stop="64131" g_length="297"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="297" r_length="297" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64132" i_stop="64447" i_length="316">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64448" g_stop="64738" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="588" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64739" i_stop="64847" i_length="109">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64848" g_stop="65047" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="589" r_stop="788" r_length="200" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65048" i_stop="65700" i_length="653">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.910" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65701" g_stop="65772" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="789" r_stop="860" r_length="72" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E707272" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>860</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E707272" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63835" e_stop="64131"/>
          <exon e_start="64448" e_stop="64738"/>
          <exon e_start="64848" e_stop="65047"/>
          <exon e_start="65701" e_stop="65772"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAATTTCTTCATTAATAACAGTTGCATTTTGTCAATTTTTTTCCCTCCAAACCCCAAATGTCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAGGCAAGTTCTATTATTCTCCTTCACTTTTTTTTTTATAAAAAAAATAGACGTTCATTAGTTCGAAATGAGTTAATGGAAATTCAAATATCTAAATGAGAAGTTTGAGTGTACAATTGCATCTATTACTTCGTACTTTAGTATAAAAAAATCGACTATATGCATATGTAGTTTAAGCCGAATCCACTGCCTCAGTTATACAATGTTAGCATTTGTAAGTAATGACAAGACTGCAGTTGGTAGTTCTTTCTAAAGTTCTCAAGTGTGTGTTCTTAATAAGTAGGAACTTATATGATGAAGATTTTTCCCAAACCTGCAGAAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGAGTAAGATGTCATTTGCTTAGTTGTTCCCACTTTGATAATTTATTGGCTTGAATCTACTTATTAATGTAGTTCTAGATTCGTAATGGTGGTTCGTATTTTAACTGTGTAGAATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACCTTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACGCTATTGAATTGCTAAACAAACTAGAAGCTGGGTTAGGTGAGCTTCAACAAATTGTTGAAGACAGGACTCGAGATGCTGTTGCACCTAAACAGAAGGAATTGCTTAACTATGTTGGAGGGTAAGTGTAGCTAGCTTAGTCTACTTCTAAAAACAGTATTGCTAGCTTAGTTTTCCATGTTCTTTGATGCACATTTTCATAAACCCTGCGAGTTGTAAAGAGTAATGAGTTGTCGGGCTTTGATTTTCTGCTTGATGATGCATCAATATGATGCTTTGTTACTGCTTCATGGACTTAATTTTATCTTCACATGAGACTGAAAAAGAGACCAATCATGCACATACTTAGCCGAAGTATCTGTTCTTCTGTCCTGAATATGTATTGGGTAGCTTGGTTTAGGCAAAGTCAATATCCATATAAAGTGTTGTATTTTCTGTGCTTTGTTACTGGAAATGTTCTAAAAGAAGGTGTCAAAACCTTAGTACAAAATAACTTTTTCTTCTGAAACTTTCACAAAGCAATTGCTTTGGTAGAATTTATGCCACAGAAGCACAGAAGTGTCATTGGACGGATGCATGTTTAAGTAGGCTACTTATTCCAGTTTGAATACCAAAATAAGATTTTTTGTTGACTATGGACCAATTCTATGAATAGAAAGTGAAGAGTGATGAAAACTTTTAAAAATGGTGAATTTCCAAAGTTATGCCTTTCTCATTTAGACCCCTTGTCATTGACTGCAGCTGAGATCTTCCTGGGGCATTCGATTTCTGCAGTGTTGAAGAGGATATGGTGGATGGATTCCCATATGAAGTACCTGAAGAATATCAAAATATGCCTTTACTGAA</genome_strand>
        <mrna_strand>CTCTATTTCTTCATTAATAACAGTTGCATTTTGTCAATTTTTTTCCCTCCAAACCCCAAATGTCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAG............................................................................................................................................................................................................................................................................................................................AAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGA.............................................................................................................AATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACCTTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACGCTATTGAATTGCTAAACAAACTAGAAGCTGGGTTAGGTGAGCTTCAACAAATTGTTGAAGACAGGACTCGAGATGCTGTTGCACCTAAACAGAAGGAATTGCTTAACTATGTTGGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGAAGAGGATATGGTGGATGGATTCCCATATGAAGTACCTGAAGAATATCAAAATATGCCTTTACTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E288511" ref_strand="+" ref_description="SGN-E288511 [cLES-8-N17]">
      <seq>tcttcattaataacagttgcattttgtcaatttttttccctccaaaccccaaatgtcctctagaattgcttgactgtgtaaacaaactagttgtaaattcatcaatggcagcatctgtttcctgccactatttttcttccccattaacaacttccaccaaatccatcaagcctaagctcaattacagccatttcgcacctgctcttagtaaaggatcgatccgccattttgttccactatgttcttcacaacgctcgcttccttctgaatcggaatgccaagacaaagagaaagattggtttttgtcattgaagaaatgtgcagctgcagtagcattgtcggttagtttgattagtggactacctggatcgcaatggttgggtcctgctcatgcgagcaccccagcattgccagatgtctctgtattgatctcagggccaccaattaaggatccaggggcgttattgaggtatgcattgcctatagacaacaaggcgataagagaagtccaaaaaccccttgaagatattactgatagtctcaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="63542" stop="65003"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63842" g_stop="64131" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="290" r_length="290" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64132" i_stop="64447" i_length="316">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64448" g_stop="64703" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="546" r_length="256" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E288511" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E288511" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63842" e_stop="64131"/>
          <exon e_start="64448" e_stop="64703"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCATTAATAACAGTTGCATTTTGTCAATTTTTTTCCCTCCAAACCCCAAATGTCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAGGCAAGTTCTATTATTCTCCTTCACTTTTTTTTTTATAAAAAAAATAGACGTTCATTAGTTCGAAATGAGTTAATGGAAATTCAAATATCTAAATGAGAAGTTTGAGTGTACAATTGCATCTATTACTTCGTACTTTAGTATAAAAAAATCGACTATATGCATATGTAGTTTAAGCCGAATCCACTGCCTCAGTTATACAATGTTAGCATTTGTAAGTAATGACAAGACTGCAGTTGGTAGTTCTTTCTAAAGTTCTCAAGTGTGTGTTCTTAATAAGTAGGAACTTATATGATGAAGATTTTTCCCAAACCTGCAGAAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGA</genome_strand>
        <mrna_strand>TCTTCATTAATAACAGTTGCATTTTGTCAATTTTTTTCCCTCCAAACCCCAAATGTCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAG............................................................................................................................................................................................................................................................................................................................AAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E335873" ref_strand="+" ref_description="SGN-E335873 [cTOE-6-F6]">
      <seq>ttgcattttgtcaatttttttccctccaaaccccaaatgtcctctagaattgcttgactgtgtaaacaaactagttgtaaattcatcaatggcagcatctgtttcctgccactatttttcttccccattaacaacttccaccaaatccatcaagcctaagctcaattacagccatttcgcacctgctcttagtaaaggatcgatccgccattttgttccactatgttcttcacaacgctcgcttccttctgaatcggaatgccaagacaaagagaaagattggtttttgtcattgaagaaatgtgcagctgcagtagcattgtcggttagtttgattagtggactacctggatcgcaatggttgggtcctgctcatgcgagcaccccagcattgccagatgtctctgtattgatctcagggccaccaattaaggatccaggggcgttattgaggtatgcattgcctatagacaacaaggcgataagagaagtccaaaaaccccttgaagatattactgatagtctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="63558" stop="64999"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63858" g_stop="64131" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64132" i_stop="64447" i_length="316">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64448" g_stop="64699" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="526" r_length="252" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E335873" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E335873" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63858" e_stop="64131"/>
          <exon e_start="64448" e_stop="64699"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCATTTTGTCAATTTTTTTCCCTCCAAACCCCAAATGTCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAGGCAAGTTCTATTATTCTCCTTCACTTTTTTTTTTATAAAAAAAATAGACGTTCATTAGTTCGAAATGAGTTAATGGAAATTCAAATATCTAAATGAGAAGTTTGAGTGTACAATTGCATCTATTACTTCGTACTTTAGTATAAAAAAATCGACTATATGCATATGTAGTTTAAGCCGAATCCACTGCCTCAGTTATACAATGTTAGCATTTGTAAGTAATGACAAGACTGCAGTTGGTAGTTCTTTCTAAAGTTCTCAAGTGTGTGTTCTTAATAAGTAGGAACTTATATGATGAAGATTTTTCCCAAACCTGCAGAAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTC</genome_strand>
        <mrna_strand>TTGCATTTTGTCAATTTTTTTCCCTCCAAACCCCAAATGTCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAG............................................................................................................................................................................................................................................................................................................................AAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E725499" ref_strand="+" ref_description="SGN-E725499 [LA03DC10]">
      <seq>aatttttttccctccaaaccccaaatgtcctctagaattgcttgactgtgtaaacaaactagttgtaaattcatcaatggcagcatctgtttcctgccactatttttcttccccattaacaacttccaccaaatccatcaagcctaagctcaattacagccatttcgcacctgctcttagtaaaggatcgatccgccattttgttccactatgttcttcacaacgctcgcttccttctgaatcggaatgccaagacaaagagaaagattggtttttgtcattgaagaaatgtgcagctgcagtagcattgtcggttagtttgattagtggactacctggatcgcaatggttgggtcctgctcatgcgagcaccccagcattgccagatgtctctgtattgatctcagggccaccaattaaggatccaggggcgttattgaggtatgcattgcctatagtacacanggcgataagagtagtccacaaaccccttgaagatattactgatagtctcaagattgctggtgtcaaggcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="63570" stop="65020"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63870" g_stop="64131" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="262" r_length="262" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64132" i_stop="64447" i_length="316">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64448" g_stop="64720" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="535" r_length="273" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E725499" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E725499" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63870" e_stop="64131"/>
          <exon e_start="64448" e_stop="64720"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTTTTCCCTCCAAACCCCAAATGTCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAGGCAAGTTCTATTATTCTCCTTCACTTTTTTTTTTATAAAAAAAATAGACGTTCATTAGTTCGAAATGAGTTAATGGAAATTCAAATATCTAAATGAGAAGTTTGAGTGTACAATTGCATCTATTACTTCGTACTTTAGTATAAAAAAATCGACTATATGCATATGTAGTTTAAGCCGAATCCACTGCCTCAGTTATACAATGTTAGCATTTGTAAGTAATGACAAGACTGCAGTTGGTAGTTCTTTCTAAAGTTCTCAAGTGTGTGTTCTTAATAAGTAGGAACTTATATGATGAAGATTTTTCCCAAACCTGCAGAAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCG</genome_strand>
        <mrna_strand>AATTTTTTTCCCTCCAAACCCCAAATGTCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAG............................................................................................................................................................................................................................................................................................................................AAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGTACACANGGCGATAAGAGTAGTCCACAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E320309" ref_strand="+" ref_description="SGN-E320309 [cTOB-21-J12]">
      <seq>ccaaatgtcctctagaattgcttgactgtgtaaacaaactagttgtaaattcatcaatggcagcatctgtttcctgccactatttttcttccccattaacaacttccaccaaatccatcaagcctaagctcaattacagccatttcgcacctgctcttagtaaaggatcgatccgccattttgttccactatgttcttcacaacgctcgcttccttctgaatcggaatgccaagacaaagagaaagattggtttttgtcattgaagaaatgtgcagctgcagtagcattgtcggttagtttgattagtggactacctggatcgcaatggttgggtcctgctcatgcgagcaccccagcattgccagatgtctctgtattgatctcagggccaccaattaaggatccaggggcgttattgaggtatgcattgcctatagacaacaaggcgataagagaagtccaaaaaccccttgaagatattactgatagtctcaagattgctggtgtcaaggcgcttgactctgttgaaagaatacaagacaagcatctcgagctctcaaggaaaggaaaaccnttgattattcangagtagctaagtcaaagactgaccacgctattgaattgctaaacaaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="63590" stop="65251"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63890" g_stop="64131" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="242" r_length="242" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64132" i_stop="64447" i_length="316">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64448" g_stop="64738" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="532" r_length="290" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64739" i_stop="64847" i_length="109">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.990" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64848" g_stop="64951" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="533" r_stop="636" r_length="104" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E320309" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>637</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E320309" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63890" e_stop="64131"/>
          <exon e_start="64448" e_stop="64738"/>
          <exon e_start="64848" e_stop="64951"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAATGTCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAGGCAAGTTCTATTATTCTCCTTCACTTTTTTTTTTATAAAAAAAATAGACGTTCATTAGTTCGAAATGAGTTAATGGAAATTCAAATATCTAAATGAGAAGTTTGAGTGTACAATTGCATCTATTACTTCGTACTTTAGTATAAAAAAATCGACTATATGCATATGTAGTTTAAGCCGAATCCACTGCCTCAGTTATACAATGTTAGCATTTGTAAGTAATGACAAGACTGCAGTTGGTAGTTCTTTCTAAAGTTCTCAAGTGTGTGTTCTTAATAAGTAGGAACTTATATGATGAAGATTTTTCCCAAACCTGCAGAAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGAGTAAGATGTCATTTGCTTAGTTGTTCCCACTTTGATAATTTATTGGCTTGAATCTACTTATTAATGTAGTTCTAGATTCGTAATGGTGGTTCGTATTTTAACTGTGTAGAATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACC-TTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACGCTATTGAATTGCTAAACAAACT</genome_strand>
        <mrna_strand>CCAAATGTCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAG............................................................................................................................................................................................................................................................................................................................AAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAG-.............................................................................................................AATACAAGACAAGCATCTCGAGCTCTCAAGGAAAGGAAAACCNTTGATTA-TTCANGAGTAGCTAAGTCAAAGACTGACCACGCTATTGAATTGCTAAACAAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E366821" ref_strand="+" ref_description="SGN-E366821 [cLPT-6-E18]">
      <seq>ccaaatgtcctctagaattgcttgactgtgtaaacaaactagttgtaaattcatcaatggcagcatctgtttcctgccactatttttcttccccattaacaacttccaccaaatccatcaagcctaagctcaattacagccatttcgcacctgctcttagtaaaggatcgatccgccattttgttccactatgttcttcacaaagctcgcttccttctgaatctgaatgccaagacaaagagaaagattggtttttgtcattgaagaaatgtgcagctgcagttgcattgtcagttagtttgattagtggactacctggatcgcaatggttgggtcctgctcatgcgagcaccccagcattgccagatgtctctgtattgatctcagggccaccgattaaggatccaggggcgttattgaggtatgcattgcctatagacaacaaggcgataagagaagtccaaaaaccccttgaagatattactgatagtctcaagattgctggtgtcaaggcgcttgactctgttgaaagaaatacaagacaagcatctcgagctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="63590" stop="65172"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63890" g_stop="64131" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="242" r_length="242" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64132" i_stop="64447" i_length="316">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.969" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64448" g_stop="64738" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="533" r_length="291" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64739" i_stop="64847" i_length="109">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64848" g_stop="64872" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="534" r_stop="558" r_length="25" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E366821" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E366821" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63890" e_stop="64131"/>
          <exon e_start="64448" e_stop="64738"/>
          <exon e_start="64848" e_stop="64872"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAATGTCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAGGCAAGTTCTATTATTCTCCTTCACTTTTTTTTTTATAAAAAAAATAGACGTTCATTAGTTCGAAATGAGTTAATGGAAATTCAAATATCTAAATGAGAAGTTTGAGTGTACAATTGCATCTATTACTTCGTACTTTAGTATAAAAAAATCGACTATATGCATATGTAGTTTAAGCCGAATCCACTGCCTCAGTTATACAATGTTAGCATTTGTAAGTAATGACAAGACTGCAGTTGGTAGTTCTTTCTAAAGTTCTCAAGTGTGTGTTCTTAATAAGTAGGAACTTATATGATGAAGATTTTTCCCAAACCTGCAGAAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGAGTAAGATGTCATTTGCTTAGTTGTTCCCACTTTGATAATTTATTGGCTTGAATCTACTTATTAATGTAGTTCTAGATTCGTAATGGTGGTTCGTATTTTAACTGTGTAGAATACAAGACAAGCATCTCGAGCTC</genome_strand>
        <mrna_strand>CCAAATGTCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAAAGCTCGCTTCCTTCTGAATCTGAATGCCAAGACAAAGAG............................................................................................................................................................................................................................................................................................................................AAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTTGCATTGTCAGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCGATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGA.............................................................................................................AATACAAGACAAGCATCTCGAGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E731269" ref_strand="+" ref_description="SGN-E731269 [LA26CE10]">
      <seq>caaatgtcctctagaattgcttgactgtgtaaacaaactagttgtaaattcatcaatggcagcatctgtttcctgccactatttttcttccccattaacaacttccaccaaatccatcaagcctaagctcaattacagccatttcgcacctgctcttagtaaaggatcgatccgccattttgttccactatgttcttcacaacgctcgcttccttctgaatcggaatgccaagacaaagagaaagattggtttttgtcattgaagaaatgtgcagctgcagtagcattgtcggttagtttgattagtggactacctggatcgcaatggttgggtcctgctcatgcgagcaccccagcattgccagatgtctctgtattgatctcagggccaccaattaaggatccaggggcgttattgaggtatgcattgcctatagacaacaaggcgataagagaagtccaaaaaccccttgaagatattactgatagtctcaagattgctggtgtcaaggcgcttgactctgttgaaagaaatacaagacaagcatctcgagctctcaaggaagggaaaaccttgattatttcaggagtagctaagtcaaagactgaccacgctattgaattgctaaacaaactagaagctgggttaggtgagcttcaacaaattgttgaagacaggactcgagatgctgttgcacctaaacagaangaattgcttaactatgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="63591" stop="65343"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63891" g_stop="64131" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="241" r_length="241" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64132" i_stop="64447" i_length="316">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64448" g_stop="64738" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="532" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64739" i_stop="64847" i_length="109">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64848" g_stop="65043" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="533" r_stop="728" r_length="196" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E731269" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>728</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E731269" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63891" e_stop="64131"/>
          <exon e_start="64448" e_stop="64738"/>
          <exon e_start="64848" e_stop="65043"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAATGTCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAGGCAAGTTCTATTATTCTCCTTCACTTTTTTTTTTATAAAAAAAATAGACGTTCATTAGTTCGAAATGAGTTAATGGAAATTCAAATATCTAAATGAGAAGTTTGAGTGTACAATTGCATCTATTACTTCGTACTTTAGTATAAAAAAATCGACTATATGCATATGTAGTTTAAGCCGAATCCACTGCCTCAGTTATACAATGTTAGCATTTGTAAGTAATGACAAGACTGCAGTTGGTAGTTCTTTCTAAAGTTCTCAAGTGTGTGTTCTTAATAAGTAGGAACTTATATGATGAAGATTTTTCCCAAACCTGCAGAAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGAGTAAGATGTCATTTGCTTAGTTGTTCCCACTTTGATAATTTATTGGCTTGAATCTACTTATTAATGTAGTTCTAGATTCGTAATGGTGGTTCGTATTTTAACTGTGTAGAATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACCTTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACGCTATTGAATTGCTAAACAAACTAGAAGCTGGGTTAGGTGAGCTTCAACAAATTGTTGAAGACAGGACTCGAGATGCTGTTGCACCTAAACAGAAGGAATTGCTTAACTATGTTG</genome_strand>
        <mrna_strand>CAAATGTCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAG............................................................................................................................................................................................................................................................................................................................AAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGA.............................................................................................................AATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACCTTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACGCTATTGAATTGCTAAACAAACTAGAAGCTGGGTTAGGTGAGCTTCAACAAATTGTTGAAGACAGGACTCGAGATGCTGTTGCACCTAAACAGAANGAATTGCTTAACTATGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E736433" ref_strand="+" ref_description="SGN-E736433 [LC05DA06]">
      <seq>cggttctctagaattgcttgactgtgtaaacaaactagttgtaaattcatcaatggcagcatctgtttcctgccactatttttcttccccattaacaacttccaccaaatccatcaagcctaagctcaattacagccatttcgcacctgctcttagtaaaggatcgatccgccattttgttccactatgttcttcacaacgctcgcttccttctgaatcggaatgccaagacaaagagaaagattggtttttgtcattgaagaaatgtgcagctgcagtagcattgtcggttagtttgattagtggactacctggatcgcaatggttgggtcctgctcatgcgagcaccccagcattgccagatgtctctgtattgatctcagggccaccaattaaggatccaggggcgttattgaggtatgcattgcctatagacaacaaggcgataagagaagtccaaaaaccccttgaagatattactgatagtctcaagattgctggtgtcaaggcgcttgactctgttgaaagaaatacaagacaagcatctcgagctctcaaggaagggaaaaccttgattatttcaggagtagctaagtcaaagactgaccacgctattgaattgctaaacaaactagaagctgggttaggtgagcttcaacaaattgttgaagacaggactcgagatgctgttgcacctaaacagaaggaattgcttaactatgttggaggtgttgaagaggatatggtggatggattcccatatgaagtacctgaagaatatcaaaatatgcctttactgaaggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="63596" stop="66076"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63894" g_stop="64131" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="238" r_length="238" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64132" i_stop="64447" i_length="316">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64448" g_stop="64738" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="529" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64739" i_stop="64847" i_length="109">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64848" g_stop="65047" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="530" r_stop="729" r_length="200" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65048" i_stop="65700" i_length="653">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.910" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65701" g_stop="65776" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="730" r_stop="805" r_length="76" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E736433" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>805</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E736433" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63894" e_stop="64131"/>
          <exon e_start="64448" e_stop="64738"/>
          <exon e_start="64848" e_stop="65047"/>
          <exon e_start="65701" e_stop="65776"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGTCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAGGCAAGTTCTATTATTCTCCTTCACTTTTTTTTTTATAAAAAAAATAGACGTTCATTAGTTCGAAATGAGTTAATGGAAATTCAAATATCTAAATGAGAAGTTTGAGTGTACAATTGCATCTATTACTTCGTACTTTAGTATAAAAAAATCGACTATATGCATATGTAGTTTAAGCCGAATCCACTGCCTCAGTTATACAATGTTAGCATTTGTAAGTAATGACAAGACTGCAGTTGGTAGTTCTTTCTAAAGTTCTCAAGTGTGTGTTCTTAATAAGTAGGAACTTATATGATGAAGATTTTTCCCAAACCTGCAGAAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGAGTAAGATGTCATTTGCTTAGTTGTTCCCACTTTGATAATTTATTGGCTTGAATCTACTTATTAATGTAGTTCTAGATTCGTAATGGTGGTTCGTATTTTAACTGTGTAGAATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACCTTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACGCTATTGAATTGCTAAACAAACTAGAAGCTGGGTTAGGTGAGCTTCAACAAATTGTTGAAGACAGGACTCGAGATGCTGTTGCACCTAAACAGAAGGAATTGCTTAACTATGTTGGAGGGTAAGTGTAGCTAGCTTAGTCTACTTCTAAAAACAGTATTGCTAGCTTAGTTTTCCATGTTCTTTGATGCACATTTTCATAAACCCTGCGAGTTGTAAAGAGTAATGAGTTGTCGGGCTTTGATTTTCTGCTTGATGATGCATCAATATGATGCTTTGTTACTGCTTCATGGACTTAATTTTATCTTCACATGAGACTGAAAAAGAGACCAATCATGCACATACTTAGCCGAAGTATCTGTTCTTCTGTCCTGAATATGTATTGGGTAGCTTGGTTTAGGCAAAGTCAATATCCATATAAAGTGTTGTATTTTCTGTGCTTTGTTACTGGAAATGTTCTAAAAGAAGGTGTCAAAACCTTAGTACAAAATAACTTTTTCTTCTGAAACTTTCACAAAGCAATTGCTTTGGTAGAATTTATGCCACAGAAGCACAGAAGTGTCATTGGACGGATGCATGTTTAAGTAGGCTACTTATTCCAGTTTGAATACCAAAATAAGATTTTTTGTTGACTATGGACCAATTCTATGAATAGAAAGTGAAGAGTGATGAAAACTTTTAAAAATGGTGAATTTCCAAAGTTATGCCTTTCTCATTTAGACCCCTTGTCATTGACTGCAGCTGAGATCTTCCTGGGGCATTCGATTTCTGCAGTGTTGAAGAGGATATGGTGGATGGATTCCCATATGAAGTACCTGAAGAATATCAAAATATGCCTTTACTGAAGGGA</genome_strand>
        <mrna_strand>CGGTTCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAG............................................................................................................................................................................................................................................................................................................................AAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGA.............................................................................................................AATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACCTTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACGCTATTGAATTGCTAAACAAACTAGAAGCTGGGTTAGGTGAGCTTCAACAAATTGTTGAAGACAGGACTCGAGATGCTGTTGCACCTAAACAGAAGGAATTGCTTAACTATGTTGGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGAAGAGGATATGGTGGATGGATTCCCATATGAAGTACCTGAAGAATATCAAAATATGCCTTTACTGAAGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E347481" ref_strand="+" ref_description="SGN-E347481 [cTOF-33-D22]">
      <seq>tcctctagaattgcttgactgtgtaaacaaactagttgtaaattcatcaatggcagcatctgtttcctgccactatttttcttccccattaacaacttccaccaaatccatcaagcctaagctcaattacagccatttcgcacctgctcttagtaaaggatcgatccgccattttgttccactatgttcttcacaacgctcgcttccttctgaatcggaatgccaagacaaagagaaagattggtttttgtcattgaagaaatgtgcagctgcagtagcattgtcggttagtttgattagtggactacctggatcgcaatggttgggtcctgctcatgcgagcaccccagcattgccagatgtctctgtattgatctcagggccaccaattaaggatccaggggcgttattgaggtatgcattgcctatagacaacaaggcgataagagaagtccaaaaaccccttgaagatattactgatagtctcaagattgctggtgtcaaggcgcttgactctgttgaaagaaatacaagacaagcatctcgagctctcaaggaagggaaaaccttgattatttcaggagtagctaagtcaaagactgaccacgctattgaattgctaaacaaactagaagctgggttaggtgagcttcaacaaattgttgaagacaggactcgagatgctgttgcacctaaacagaangaattgcttaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="63597" stop="65336"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63897" g_stop="64131" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="235" r_length="235" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64132" i_stop="64447" i_length="316">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64448" g_stop="64738" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="526" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64739" i_stop="64847" i_length="109">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64848" g_stop="65036" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="715" r_length="189" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E347481" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E347481" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63897" e_stop="64131"/>
          <exon e_start="64448" e_stop="64738"/>
          <exon e_start="64848" e_stop="65036"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAGGCAAGTTCTATTATTCTCCTTCACTTTTTTTTTTATAAAAAAAATAGACGTTCATTAGTTCGAAATGAGTTAATGGAAATTCAAATATCTAAATGAGAAGTTTGAGTGTACAATTGCATCTATTACTTCGTACTTTAGTATAAAAAAATCGACTATATGCATATGTAGTTTAAGCCGAATCCACTGCCTCAGTTATACAATGTTAGCATTTGTAAGTAATGACAAGACTGCAGTTGGTAGTTCTTTCTAAAGTTCTCAAGTGTGTGTTCTTAATAAGTAGGAACTTATATGATGAAGATTTTTCCCAAACCTGCAGAAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGAGTAAGATGTCATTTGCTTAGTTGTTCCCACTTTGATAATTTATTGGCTTGAATCTACTTATTAATGTAGTTCTAGATTCGTAATGGTGGTTCGTATTTTAACTGTGTAGAATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACCTTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACGCTATTGAATTGCTAAACAAACTAGAAGCTGGGTTAGGTGAGCTTCAACAAATTGTTGAAGACAGGACTCGAGATGCTGTTGCACCTAAACAGAAGGAATTGCTTAAC</genome_strand>
        <mrna_strand>TCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAG............................................................................................................................................................................................................................................................................................................................AAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGA.............................................................................................................AATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACCTTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACGCTATTGAATTGCTAAACAAACTAGAAGCTGGGTTAGGTGAGCTTCAACAAATTGTTGAAGACAGGACTCGAGATGCTGTTGCACCTAAACAGAANGAATTGCTTAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E339835" ref_strand="+" ref_description="SGN-E339835 [cTOF-3-G1]">
      <seq>tcctctagaattgcttgactgtgtaaacaaactagttgtaaattcatcaatggcagcatctgtttcctgccactatttttcttccccattaacaacttccaccaaatccatcaagcctaagctcaattacagccatttcgcacctgctcttagtaaaggatcgatccgccattttgttccactatgttcttcacaacgctcgcttccttctgaatcggaatgccaagacaaagagaaagattggtttttgtcattgaagaaatgtgcagctgcagtagcattgtcggttagtttgattagtggactacctggatcgcaatggttgggtcctgctcatgcgagcaccccagcattgccagatgtctctgtattgatctcagggccaccaattaaggatccaggggcgttattgaggtatgcattgcctatagacaacaaggcgataagagaagtccaaaaaccccttgaagatattactgatagtctcaagattgctggtgtcaaggcgcttgactctgttgaaagaaatacaagacaagcatctcgagctctcaaggaagggaaaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="63597" stop="65189"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63897" g_stop="64131" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="235" r_length="235" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64132" i_stop="64447" i_length="316">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64448" g_stop="64738" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="526" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64739" i_stop="64847" i_length="109">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64848" g_stop="64889" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="568" r_length="42" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E339835" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E339835" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63897" e_stop="64131"/>
          <exon e_start="64448" e_stop="64738"/>
          <exon e_start="64848" e_stop="64889"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAGGCAAGTTCTATTATTCTCCTTCACTTTTTTTTTTATAAAAAAAATAGACGTTCATTAGTTCGAAATGAGTTAATGGAAATTCAAATATCTAAATGAGAAGTTTGAGTGTACAATTGCATCTATTACTTCGTACTTTAGTATAAAAAAATCGACTATATGCATATGTAGTTTAAGCCGAATCCACTGCCTCAGTTATACAATGTTAGCATTTGTAAGTAATGACAAGACTGCAGTTGGTAGTTCTTTCTAAAGTTCTCAAGTGTGTGTTCTTAATAAGTAGGAACTTATATGATGAAGATTTTTCCCAAACCTGCAGAAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGAGTAAGATGTCATTTGCTTAGTTGTTCCCACTTTGATAATTTATTGGCTTGAATCTACTTATTAATGTAGTTCTAGATTCGTAATGGTGGTTCGTATTTTAACTGTGTAGAATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACC</genome_strand>
        <mrna_strand>TCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAG............................................................................................................................................................................................................................................................................................................................AAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGA.............................................................................................................AATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E342959" ref_strand="+" ref_description="SGN-E342959 [cTOF-11-B10]">
      <seq>tagaattgcttgactgtgtaaacaaactagttgtaaattcatcaatggcagcatctgtttcctgccactatttttcttccccattaacaacttccaccaaatccatcaagcctaagctcaattacagccatttcgcacctgctcttagtaaaggatcgatccgccattttgttccactatgttcttcacaacgctcgcttccttctgaatcggaatgccaagacaaagagaaagattggtttttgtcattgaagaaatgtgcagctgcagtagcattgtcggttagtttgattagtggactacctggatcgcaatggttgggtcctgctcatgcgagcaccccagcattgccagatgtctctgtattgatctcagggccaccaattaaggatccaggggcgttattgaggtatgcattgcctatagacaacaaggcgataagagaagtccaaaaaccccttgaagatattactgatagtctcaagattgctggtgtcaaggcgcttgactctgttgaaagaaatacaagacaagcatctcgagctctcaaggaagggaaaaccttgattatttcaggagtagctaagtcaaagactgaccacgctattgaattgctaaacaaactagaaagctggttaggtgagcttcaacaaattgttgaagacaggactcgagatgctgntgcacctaaacagaaggaattgcttaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="63602" stop="65336"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63902" g_stop="64131" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="230" r_length="230" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64132" i_stop="64447" i_length="316">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64448" g_stop="64738" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="521" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64739" i_stop="64847" i_length="109">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64848" g_stop="65036" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="522" r_stop="710" r_length="189" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E342959" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>710</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E342959" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63902" e_stop="64131"/>
          <exon e_start="64448" e_stop="64738"/>
          <exon e_start="64848" e_stop="65036"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAGGCAAGTTCTATTATTCTCCTTCACTTTTTTTTTTATAAAAAAAATAGACGTTCATTAGTTCGAAATGAGTTAATGGAAATTCAAATATCTAAATGAGAAGTTTGAGTGTACAATTGCATCTATTACTTCGTACTTTAGTATAAAAAAATCGACTATATGCATATGTAGTTTAAGCCGAATCCACTGCCTCAGTTATACAATGTTAGCATTTGTAAGTAATGACAAGACTGCAGTTGGTAGTTCTTTCTAAAGTTCTCAAGTGTGTGTTCTTAATAAGTAGGAACTTATATGATGAAGATTTTTCCCAAACCTGCAGAAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGAGTAAGATGTCATTTGCTTAGTTGTTCCCACTTTGATAATTTATTGGCTTGAATCTACTTATTAATGTAGTTCTAGATTCGTAATGGTGGTTCGTATTTTAACTGTGTAGAATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACCTTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACGCTATTGAATTGCTAAACAAACTAGAAGCTGGGTTAGGTGAGCTTCAACAAATTGTTGAAGACAGGACTCGAGATGCTGTTGCACCTAAACAGAAGGAATTGCTTAAC</genome_strand>
        <mrna_strand>TAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAG............................................................................................................................................................................................................................................................................................................................AAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGA.............................................................................................................AATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACCTTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACGCTATTGAATTGCTAAACAAACTAGAAAGCTGGTTAGGTGAGCTTCAACAAATTGTTGAAGACAGGACTCGAGATGCTGNTGCACCTAAACAGAAGGAATTGCTTAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E366126" ref_strand="+" ref_description="SGN-E366126 [cLPT-15-J9]">
      <seq>tagaattgcttgactgtgtaaacaaactagttgtaaattcatgaatggcagcatctgtttcctgccactatttttcttccccattaacaacttccaccaaatccatcaagcctaagctcaattacagccatttcgcacctgctcttaataaaggatcgatccgccattttgttccactatgttcttcacaaagctcgctttcttatgaatctgaatgccaagacaaagagaaagattggtttttgtcattgaagaaatgtgcagctgcagttgcattgtcagttagtttgattagtggactacctggatcgcaatggttgggtcctgctcatgcgagcaccccagcattgccagatgtctctggattgatctcagggccaccgattaaggatccacgggcgttattgaggtatgcattgcctatagacaacaaggcgataagagaagtccaaaaaccccttgaagatattactgatagtctcaagattgctggtgtcaaggcgcttgactctgctgaaagaaatacaagacaagcatctcgagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="63602" stop="65170"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63902" g_stop="64131" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="230" r_length="230" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64132" i_stop="64447" i_length="316">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="0.969" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64448" g_stop="64738" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="521" r_length="291" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64739" i_stop="64847" i_length="109">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.990" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64848" g_stop="64870" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="522" r_stop="544" r_length="23" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E366126" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>544</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E366126" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63902" e_stop="64131"/>
          <exon e_start="64448" e_stop="64738"/>
          <exon e_start="64848" e_stop="64870"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAGGCAAGTTCTATTATTCTCCTTCACTTTTTTTTTTATAAAAAAAATAGACGTTCATTAGTTCGAAATGAGTTAATGGAAATTCAAATATCTAAATGAGAAGTTTGAGTGTACAATTGCATCTATTACTTCGTACTTTAGTATAAAAAAATCGACTATATGCATATGTAGTTTAAGCCGAATCCACTGCCTCAGTTATACAATGTTAGCATTTGTAAGTAATGACAAGACTGCAGTTGGTAGTTCTTTCTAAAGTTCTCAAGTGTGTGTTCTTAATAAGTAGGAACTTATATGATGAAGATTTTTCCCAAACCTGCAGAAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGAGTAAGATGTCATTTGCTTAGTTGTTCCCACTTTGATAATTTATTGGCTTGAATCTACTTATTAATGTAGTTCTAGATTCGTAATGGTGGTTCGTATTTTAACTGTGTAGAATACAAGACAAGCATCTCGAGC</genome_strand>
        <mrna_strand>TAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATGAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAATAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAAAGCTCGCTTTCTTATGAATCTGAATGCCAAGACAAAGAG............................................................................................................................................................................................................................................................................................................................AAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTTGCATTGTCAGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGGATTGATCTCAGGGCCACCGATTAAGGATCCACGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGCTGAAAGA.............................................................................................................AATACAAGACAAGCATCTCGAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E725405" ref_strand="+" ref_description="SGN-E725405 [LA03AA07]">
      <seq>ggctgcaggaattcgcacgaggtgactgtgtaaacaaactagttgtaaattcatcaatggcagcatctgtttcctgccactatttttcttccccattaacaacttccaccaaatccatcaagcctaagctcaattacagccatttcgcacctgctcttagtaaaggatcgatccgccattttgttccactatgttcttcacaacgctcgcttccttctgaatcggaatgccaagacaaagagaaagattggtttttgtcattgaagaaatgtgcagctgcagtagcattgtcggttagtttgattagtggactacctggatcgcaatggttgggtcctgctcatgcgagcaccccagcattgccagatgtctctgtattgatctcagggccaccaattaaggatccaggggcgttattgaggtatgcattgcctatagacaacaagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="63612" stop="64952"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63912" g_stop="64131" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="242" r_length="220" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64132" i_stop="64447" i_length="316">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64448" g_stop="64652" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="447" r_length="205" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E725405" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>425</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E725405" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63912" e_stop="64131"/>
          <exon e_start="64448" e_stop="64652"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAGGCAAGTTCTATTATTCTCCTTCACTTTTTTTTTTATAAAAAAAATAGACGTTCATTAGTTCGAAATGAGTTAATGGAAATTCAAATATCTAAATGAGAAGTTTGAGTGTACAATTGCATCTATTACTTCGTACTTTAGTATAAAAAAATCGACTATATGCATATGTAGTTTAAGCCGAATCCACTGCCTCAGTTATACAATGTTAGCATTTGTAAGTAATGACAAGACTGCAGTTGGTAGTTCTTTCTAAAGTTCTCAAGTGTGTGTTCTTAATAAGTAGGAACTTATATGATGAAGATTTTTCCCAAACCTGCAGAAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGG</genome_strand>
        <mrna_strand>TGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAG............................................................................................................................................................................................................................................................................................................................AAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E279300" ref_strand="-" ref_description="SGN-E279300 [cLEL-4-H11](-)">
      <seq>gcacgagaaacaaactagttgtaaattcatcaatggcagcatctgtttcctgccactatttttcttccccattaacaacttccaccaaatccatcaagcctaagctcaattacagccatttcgcacctgctcttagtaaaggatcgatccgccattttgttccactatgttcttcacaacgctcgcttccttctgaatcggaatgccaagacaaagagaaagattggtttttgtcattgaagaaatgtgcagctgcagtagcattgtcggttagtttgattagtggactacctggatcgcaatggttgggtcctgctcatgcgagcaccccagcattgccagatgtctctgtattgatctcagggccaccaattaaggatccaggggcgttattgaggtatgcattgcctatagacaacaaggcgataagagaagtccaaaaaccccttgaagatattac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="63611" stop="64989"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63913" g_stop="64131" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="218" r_length="218" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64132" i_stop="64447" i_length="316">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64448" g_stop="64689" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="460" r_length="242" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E279300" ref_strand="-">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E279300" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="63913" e_stop="64131"/>
          <exon e_start="64448" e_stop="64689"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAGGCAAGTTCTATTATTCTCCTTCACTTTTTTTTTTATAAAAAAAATAGACGTTCATTAGTTCGAAATGAGTTAATGGAAATTCAAATATCTAAATGAGAAGTTTGAGTGTACAATTGCATCTATTACTTCGTACTTTAGTATAAAAAAATCGACTATATGCATATGTAGTTTAAGCCGAATCCACTGCCTCAGTTATACAATGTTAGCATTTGTAAGTAATGACAAGACTGCAGTTGGTAGTTCTTTCTAAAGTTCTCAAGTGTGTGTTCTTAATAAGTAGGAACTTATATGATGAAGATTTTTCCCAAACCTGCAGAAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTAC</genome_strand>
        <mrna_strand>GCACGAG-AAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAG............................................................................................................................................................................................................................................................................................................................AAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E728790" ref_strand="+" ref_description="SGN-E728790 [LA18DH03]">
      <seq>ctgtgtaaacaaactagttgtaaattcatcaatggcagcatctgtttcctgccactatttttcttccccattaacaacttccaccaaatccatcaagcctaagctcaattacagccatttcgcacctgctcttagtaaaggatcgatccgccattttgttccactatgttcttcacaacgctcgcttccttctgaatcggaatgccaagacaaagagaaagattggtttttgtcattgaagaaatgtgcagctgcagtagcattgtcggttagtttgattagtggactacctggatcgcaatggttgggtcctgctcatgcgagcaccccagcattgccagatgtctctgtattgatctcagggccaccaattaaggatccaggggcgttattgaggtatgcattgcctatagacaacaaggcgataagagaagtccaaaaaccccttgaagatattactgatagtctcaagattgctggtgtcaaggcgcttgactctgttgaaagaaatacaagacaagcatctcgagctctcaaggaagggaaaaccttgattatttcaggagtagctaagtcaaagactgaccacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="63615" stop="65229"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63915" g_stop="64131" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="217" r_length="217" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64132" i_stop="64447" i_length="316">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64448" g_stop="64738" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="508" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64739" i_stop="64847" i_length="109">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64848" g_stop="64929" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="509" r_stop="590" r_length="82" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E728790" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>590</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E728790" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63915" e_stop="64131"/>
          <exon e_start="64448" e_stop="64738"/>
          <exon e_start="64848" e_stop="64929"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAGGCAAGTTCTATTATTCTCCTTCACTTTTTTTTTTATAAAAAAAATAGACGTTCATTAGTTCGAAATGAGTTAATGGAAATTCAAATATCTAAATGAGAAGTTTGAGTGTACAATTGCATCTATTACTTCGTACTTTAGTATAAAAAAATCGACTATATGCATATGTAGTTTAAGCCGAATCCACTGCCTCAGTTATACAATGTTAGCATTTGTAAGTAATGACAAGACTGCAGTTGGTAGTTCTTTCTAAAGTTCTCAAGTGTGTGTTCTTAATAAGTAGGAACTTATATGATGAAGATTTTTCCCAAACCTGCAGAAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGAGTAAGATGTCATTTGCTTAGTTGTTCCCACTTTGATAATTTATTGGCTTGAATCTACTTATTAATGTAGTTCTAGATTCGTAATGGTGGTTCGTATTTTAACTGTGTAGAATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACCTTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACG</genome_strand>
        <mrna_strand>CTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAG............................................................................................................................................................................................................................................................................................................................AAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGA.............................................................................................................AATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACCTTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E739588" ref_strand="+" ref_description="SGN-E739588 [LC18AB10]">
      <seq>cacttcttccaccaaatccatcaagcctaagctcaattacagccatttcgcacctgctcttagtaaaggatcgatccgccattttgttccactatgttcttcacaacgctcgcttccttctgaatcggaatgccaagacaaagagaaagattggtttttgtcattgaagaaatgtgcagctgcagtagcattgtcggttagtttgattagtggactacctggatcgcaatggttgggtcctgctcatgcgagcaccccagcattgccagatgtctctgtattgatctcagggccaccaattaaggatccaggggcgttattgaggtatgcattgcctatagacaacaaggcgataagagaagtccaaaaaccccttgaagatattactgatagtctcaagattgctggtgtcaaggcgcttgactctgttgaaagaaatacaagacaagcatctcgagctctcaaggaagggaaaaccttgattatttcaggagtagctaagtcaaagactgaccacgctattgaattgctaaacaaactagaagctgggttaggtgagcttcaacaaattgttgaagacaggactcgagatgctgttgcacctaaacagaaggaattgcttaactatgttggaggctgagatcttcctggggcattcgatttctgcagtgttgaagaggatatggtggatggattcccatatgaagtacctgaagaatatcaaaatatgcctttactgaagggaagagcaactgtggatatgaaggtcaaagtcaaagacaatcccaacctggaggaatgcgtatttcgtattgttctagatgaatataatgctccagttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="63688" stop="66175"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63987" g_stop="64131" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="145" r_length="145" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64132" i_stop="64447" i_length="316">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64448" g_stop="64738" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="436" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64739" i_stop="64847" i_length="109">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64848" g_stop="65047" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="636" r_length="200" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65048" i_stop="65667" i_length="620">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.879" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65668" g_stop="65875" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="637" r_stop="844" r_length="208" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E739588" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>844</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E739588" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63987" e_stop="64131"/>
          <exon e_start="64448" e_stop="64738"/>
          <exon e_start="64848" e_stop="65047"/>
          <exon e_start="65668" e_stop="65875"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAGGCAAGTTCTATTATTCTCCTTCACTTTTTTTTTTATAAAAAAAATAGACGTTCATTAGTTCGAAATGAGTTAATGGAAATTCAAATATCTAAATGAGAAGTTTGAGTGTACAATTGCATCTATTACTTCGTACTTTAGTATAAAAAAATCGACTATATGCATATGTAGTTTAAGCCGAATCCACTGCCTCAGTTATACAATGTTAGCATTTGTAAGTAATGACAAGACTGCAGTTGGTAGTTCTTTCTAAAGTTCTCAAGTGTGTGTTCTTAATAAGTAGGAACTTATATGATGAAGATTTTTCCCAAACCTGCAGAAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGAGTAAGATGTCATTTGCTTAGTTGTTCCCACTTTGATAATTTATTGGCTTGAATCTACTTATTAATGTAGTTCTAGATTCGTAATGGTGGTTCGTATTTTAACTGTGTAGAATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACCTTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACGCTATTGAATTGCTAAACAAACTAGAAGCTGGGTTAGGTGAGCTTCAACAAATTGTTGAAGACAGGACTCGAGATGCTGTTGCACCTAAACAGAAGGAATTGCTTAACTATGTTGGAGGGTAAGTGTAGCTAGCTTAGTCTACTTCTAAAAACAGTATTGCTAGCTTAGTTTTCCATGTTCTTTGATGCACATTTTCATAAACCCTGCGAGTTGTAAAGAGTAATGAGTTGTCGGGCTTTGATTTTCTGCTTGATGATGCATCAATATGATGCTTTGTTACTGCTTCATGGACTTAATTTTATCTTCACATGAGACTGAAAAAGAGACCAATCATGCACATACTTAGCCGAAGTATCTGTTCTTCTGTCCTGAATATGTATTGGGTAGCTTGGTTTAGGCAAAGTCAATATCCATATAAAGTGTTGTATTTTCTGTGCTTTGTTACTGGAAATGTTCTAAAAGAAGGTGTCAAAACCTTAGTACAAAATAACTTTTTCTTCTGAAACTTTCACAAAGCAATTGCTTTGGTAGAATTTATGCCACAGAAGCACAGAAGTGTCATTGGACGGATGCATGTTTAAGTAGGCTACTTATTCCAGTTTGAATACCAAAATAAGATTTTTTGTTGACTATGGACCAATTCTATGAATAGAAAGTGAAGAGTGATGAAAACTTTTAAAAATGGTGAATTTCCAAAGTTATGCCTTTCTCATTTAGACCCCTTGTCATTGACTGCAGCTGAGATCTTCCTGGGGCATTCGATTTCTGCAGTGTTGAAGAGGATATGGTGGATGGATTCCCATATGAAGTACCTGAAGAATATCAAAATATGCCTTTACTGAAGGGAAGAGCAACTGTGGATATGAAGGTCAAAGTCAAAGACAATCCCAACCTGGAGGAATGCGTATTTCGTATTGTTCTAGATGGATATAATGCTCCAGTTACT</genome_strand>
        <mrna_strand>CACTTCTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAG............................................................................................................................................................................................................................................................................................................................AAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGA.............................................................................................................AATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACCTTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACGCTATTGAATTGCTAAACAAACTAGAAGCTGGGTTAGGTGAGCTTCAACAAATTGTTGAAGACAGGACTCGAGATGCTGTTGCACCTAAACAGAAGGAATTGCTTAACTATGTTGGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGATCTTCCTGGGGCATTCGATTTCTGCAGTGTTGAAGAGGATATGGTGGATGGATTCCCATATGAAGTACCTGAAGAATATCAAAATATGCCTTTACTGAAGGGAAGAGCAACTGTGGATATGAAGGTCAAAGTCAAAGACAATCCCAACCTGGAGGAATGCGTATTTCGTATTGTTCTAGATGAATATAATGCTCCAGTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E739084" ref_strand="+" ref_description="SGN-E739084 [LC16AC07]">
      <seq>ccttcttccaccaaatccatcaagcctaagctcaattacagccatttcgcacctgctcttagtaaaggatcgatccgccattttgttccactatgttcttcacaacgctcgcttccttctgaatcggaatgccaagacaaagagaaagattggtttttgtcattgaagaaatgtgcagctgcagtagcattgtcggttagtttgattagtggactacctggatcgcaatggttgggtcctgctcatgcgagcaccccagcattgccagatgtctctgtattgatctcagggccaccaattaaggatccaggggcgttattgaggtatgcattgcctatagacaacaaggcgataagagaagtccaaaaaccccttgaagatattactgatagtctcaagattgctggtgtcaaggcgcttgactctgttgaaagaaatacaagacaagcatctcgagctctcaaggaagggaaaaccttgattatttcaggagtagctaagtcaaagactgaccacgctattgaattgctaaacaaactagaagctgggttaggtgagcttcaacaaattgttgaagacaggactcgagatgctgttgcacctaaacagaaggaattgcttaactatgttggaggctgagatcttcctggggcattcgatttctgcagtgttgaagaggatatggtggatggattcccatatgaagtacctgaagaatatcaaaatatgcctttactgaagggaagagcaactgtggatatgaaggtcaaagtcaaagacaatcccaacctggaggaatgcgtatttcgtattgttctagatggatataatgctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="63692" stop="66167"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63988" g_stop="64131" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64132" i_stop="64447" i_length="316">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64448" g_stop="64738" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="435" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64739" i_stop="64847" i_length="109">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64848" g_stop="65047" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="436" r_stop="635" r_length="200" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65048" i_stop="65667" i_length="620">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.879" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65668" g_stop="65867" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="636" r_stop="835" r_length="200" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E739084" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>835</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E739084" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63988" e_stop="64131"/>
          <exon e_start="64448" e_stop="64738"/>
          <exon e_start="64848" e_stop="65047"/>
          <exon e_start="65668" e_stop="65867"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAGGCAAGTTCTATTATTCTCCTTCACTTTTTTTTTTATAAAAAAAATAGACGTTCATTAGTTCGAAATGAGTTAATGGAAATTCAAATATCTAAATGAGAAGTTTGAGTGTACAATTGCATCTATTACTTCGTACTTTAGTATAAAAAAATCGACTATATGCATATGTAGTTTAAGCCGAATCCACTGCCTCAGTTATACAATGTTAGCATTTGTAAGTAATGACAAGACTGCAGTTGGTAGTTCTTTCTAAAGTTCTCAAGTGTGTGTTCTTAATAAGTAGGAACTTATATGATGAAGATTTTTCCCAAACCTGCAGAAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGAGTAAGATGTCATTTGCTTAGTTGTTCCCACTTTGATAATTTATTGGCTTGAATCTACTTATTAATGTAGTTCTAGATTCGTAATGGTGGTTCGTATTTTAACTGTGTAGAATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACCTTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACGCTATTGAATTGCTAAACAAACTAGAAGCTGGGTTAGGTGAGCTTCAACAAATTGTTGAAGACAGGACTCGAGATGCTGTTGCACCTAAACAGAAGGAATTGCTTAACTATGTTGGAGGGTAAGTGTAGCTAGCTTAGTCTACTTCTAAAAACAGTATTGCTAGCTTAGTTTTCCATGTTCTTTGATGCACATTTTCATAAACCCTGCGAGTTGTAAAGAGTAATGAGTTGTCGGGCTTTGATTTTCTGCTTGATGATGCATCAATATGATGCTTTGTTACTGCTTCATGGACTTAATTTTATCTTCACATGAGACTGAAAAAGAGACCAATCATGCACATACTTAGCCGAAGTATCTGTTCTTCTGTCCTGAATATGTATTGGGTAGCTTGGTTTAGGCAAAGTCAATATCCATATAAAGTGTTGTATTTTCTGTGCTTTGTTACTGGAAATGTTCTAAAAGAAGGTGTCAAAACCTTAGTACAAAATAACTTTTTCTTCTGAAACTTTCACAAAGCAATTGCTTTGGTAGAATTTATGCCACAGAAGCACAGAAGTGTCATTGGACGGATGCATGTTTAAGTAGGCTACTTATTCCAGTTTGAATACCAAAATAAGATTTTTTGTTGACTATGGACCAATTCTATGAATAGAAAGTGAAGAGTGATGAAAACTTTTAAAAATGGTGAATTTCCAAAGTTATGCCTTTCTCATTTAGACCCCTTGTCATTGACTGCAGCTGAGATCTTCCTGGGGCATTCGATTTCTGCAGTGTTGAAGAGGATATGGTGGATGGATTCCCATATGAAGTACCTGAAGAATATCAAAATATGCCTTTACTGAAGGGAAGAGCAACTGTGGATATGAAGGTCAAAGTCAAAGACAATCCCAACCTGGAGGAATGCGTATTTCGTATTGTTCTAGATGGATATAATGCTC</genome_strand>
        <mrna_strand>CCTTCTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAG............................................................................................................................................................................................................................................................................................................................AAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGA.............................................................................................................AATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACCTTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACGCTATTGAATTGCTAAACAAACTAGAAGCTGGGTTAGGTGAGCTTCAACAAATTGTTGAAGACAGGACTCGAGATGCTGTTGCACCTAAACAGAAGGAATTGCTTAACTATGTTGGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGATCTTCCTGGGGCATTCGATTTCTGCAGTGTTGAAGAGGATATGGTGGATGGATTCCCATATGAAGTACCTGAAGAATATCAAAATATGCCTTTACTGAAGGGAAGAGCAACTGTGGATATGAAGGTCAAAGTCAAAGACAATCCCAACCTGGAGGAATGCGTATTTCGTATTGTTCTAGATGGATATAATGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E202299" ref_strand="+" ref_description="SGN-E202299 [cLEC-6-G14]">
      <seq>tccaggggcgttattgaggtatgcattgcctatagacaacaaggcgataagagaagtccaaaaaccccttgaagatattactgatagtctcaagattgctggtgtcaaggcgcttgactctgttgaaagaaatacaagacaagcatctcgagctctcaaggaagggaaaaccttgattatttcaggagtagctaagtcaaagactgaccacgctattgaattgctaaacaaactagaagctgggttaggtgagcttcaacaaattgttgaagacaggactcgagatgctgttgcacctaaacagaaggaattgcttaactatgttggaggctgagatcttcctggggcattcgatttctgcagtgttgaagaggatatggtggatggattcccatatgaagtacctgaagagtatcaaaatatgcctttactgaagggaagagcaactgtggatatgaaggtcaaagtcaaagacaatcccaacctggaggaatgcgtatttcgtattgttctagatggatataatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="64309" stop="66166"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64609" g_stop="64738" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="130" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64739" i_stop="64847" i_length="109">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64848" g_stop="65047" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="330" r_length="200" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65048" i_stop="65667" i_length="620">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.879" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65668" g_stop="65866" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="529" r_length="199" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E202299" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E202299" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64609" e_stop="64738"/>
          <exon e_start="64848" e_stop="65047"/>
          <exon e_start="65668" e_stop="65866"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGAGTAAGATGTCATTTGCTTAGTTGTTCCCACTTTGATAATTTATTGGCTTGAATCTACTTATTAATGTAGTTCTAGATTCGTAATGGTGGTTCGTATTTTAACTGTGTAGAATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACCTTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACGCTATTGAATTGCTAAACAAACTAGAAGCTGGGTTAGGTGAGCTTCAACAAATTGTTGAAGACAGGACTCGAGATGCTGTTGCACCTAAACAGAAGGAATTGCTTAACTATGTTGGAGGGTAAGTGTAGCTAGCTTAGTCTACTTCTAAAAACAGTATTGCTAGCTTAGTTTTCCATGTTCTTTGATGCACATTTTCATAAACCCTGCGAGTTGTAAAGAGTAATGAGTTGTCGGGCTTTGATTTTCTGCTTGATGATGCATCAATATGATGCTTTGTTACTGCTTCATGGACTTAATTTTATCTTCACATGAGACTGAAAAAGAGACCAATCATGCACATACTTAGCCGAAGTATCTGTTCTTCTGTCCTGAATATGTATTGGGTAGCTTGGTTTAGGCAAAGTCAATATCCATATAAAGTGTTGTATTTTCTGTGCTTTGTTACTGGAAATGTTCTAAAAGAAGGTGTCAAAACCTTAGTACAAAATAACTTTTTCTTCTGAAACTTTCACAAAGCAATTGCTTTGGTAGAATTTATGCCACAGAAGCACAGAAGTGTCATTGGACGGATGCATGTTTAAGTAGGCTACTTATTCCAGTTTGAATACCAAAATAAGATTTTTTGTTGACTATGGACCAATTCTATGAATAGAAAGTGAAGAGTGATGAAAACTTTTAAAAATGGTGAATTTCCAAAGTTATGCCTTTCTCATTTAGACCCCTTGTCATTGACTGCAGCTGAGATCTTCCTGGGGCATTCGATTTCTGCAGTGTTGAAGAGGATATGGTGGATGGATTCCCATATGAAGTACCTGAAGAATATCAAAATATGCCTTTACTGAAGGGAAGAGCAACTGTGGATATGAAGGTCAAAGTCAAAGACAATCCCAACCTGGAGGAATGCGTATTTCGTATTGTTCTAGATGGATATAATGCT</genome_strand>
        <mrna_strand>TCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGA.............................................................................................................AATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACCTTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACGCTATTGAATTGCTAAACAAACTAGAAGCTGGGTTAGGTGAGCTTCAACAAATTGTTGAAGACAGGACTCGAGATGCTGTTGCACCTAAACAGAAGGAATTGCTTAACTATGTTGGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGATCTTCCTGGGGCATTCGATTTCTGCAGTGTTGAAGAGGATATGGTGGATGGATTCCCATATGAAGTACCTGAAGAGTATCAAAATATGCCTTTACTGAAGGGAAGAGCAACTGTGGATATGAAGGTCAAAGTCAAAGACAATCCCAACCTGGAGGAATGCGTATTTCGTATTGTTCTAGATGGATATAATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E243184" ref_strand="+" ref_description="SGN-E243184 [cLEE-2-A15]">
      <seq>aacattccttgtttgatgcatagacagttttatttgtttcattgattcgcaagaacagagcaaaaatcataagctcacctctttgaatatccatgccatcatagaaatgcctctcgaccaagtctataaaatttccagcagtaactggagcattatatccatctagaacaatacgaaatacgcattcctccaggtacttcatatgggaatccatccaccatatcctcttcaacactgcagaaatcgaatgccccaggaagatctcagctgcagtcaatgacaaggggtctaaatgagaaaggcataactttggaaattcaccatttttaaaagttttcatcactcttcactttctattcatagaattggtccatagtcaacaaaaaatcttattttggtattcaaactggaataagtagcctacttaaacatgcatccgtccaatgacacttctgtgcttctgtggcataaattctaccaaagcaattgctttgtgaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="66314" stop="65136"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66014" g_stop="65822" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="193" r_length="193" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65821" i_stop="65742" i_length="80">
            <donor d_prob="0.794" d_score="1.00"/>
            <acceptor a_prob="0.917" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65741" g_stop="65436" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="499" r_length="306" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="500" polyA_stop="509"/>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E243184" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>499</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E243184" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66014" e_stop="65822"/>
          <exon e_start="65741" e_stop="65436"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACATTCCTTGTTTGATGCATAGACAGTTTTATTTGTTTCATTGATTCGCAAGAACAGAGCAAAAATCATAAGCTCACCTCTTTGAATATCCATGCCATCATAGAAATGCCTCTCGACCAAGTCTATAAAATTTCCAGCAGTAACTGGAGCATTATATCCATCTAGAACAATACGAAATACGCATTCCTCCAGGTTGGGATTGTCTTTGACTTTGACCTTCATATCCACAGTTGCTCTTCCCTTCAGTAAAGGCATATTTTGATATTCTTCAGGTACTTCATATGGGAATCCATCCACCATATCCTCTTCAACACTGCAGAAATCGAATGCCCCAGGAAGATCTCAGCTGCAGTCAATGACAAGGGGTCTAAATGAGAAAGGCATAACTTTGGAAATTCACCATTTTTAAAAGTTTTCATCACTCTTCACTTTCTATTCATAGAATTGGTCCATAGTCAACAAAAAATCTTATTTTGGTATTCAAACTGGAATAAGTAGCCTACTTAAACATGCATCCGTCCAATGACACTTCTGTGCTTCTGTGGCATAAATTCTACCAAAGCAATTGCTTTGTGAAA</genome_strand>
        <mrna_strand>AACATTCCTTGTTTGATGCATAGACAGTTTTATTTGTTTCATTGATTCGCAAGAACAGAGCAAAAATCATAAGCTCACCTCTTTGAATATCCATGCCATCATAGAAATGCCTCTCGACCAAGTCTATAAAATTTCCAGCAGTAACTGGAGCATTATATCCATCTAGAACAATACGAAATACGCATTCCTCCAG................................................................................GTACTTCATATGGGAATCCATCCACCATATCCTCTTCAACACTGCAGAAATCGAATGCCCCAGGAAGATCTCAGCTGCAGTCAATGACAAGGGGTCTAAATGAGAAAGGCATAACTTTGGAAATTCACCATTTTTAAAAGTTTTCATCACTCTTCACTTTCTATTCATAGAATTGGTCCATAGTCAACAAAAAATCTTATTTTGGTATTCAAACTGGAATAAGTAGCCTACTTAAACATGCATCCGTCCAATGACACTTCTGTGCTTCTGTGGCATAAATTCTACCAAAGCAATTGCTTTGTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E287750" ref_strand="+" ref_description="SGN-E287750 [cLES-9-P20]">
      <seq>ggatatgaaggtcaaagtcaaagacaatcccaacctggaggaatgcgtatttcgtattgttctagatggatataatgctccagttactgctggaaattttatagacttggtcgagaggcatttctatgatggcatggatattcaaagagcggatggatttgtggtacaaacaggagatcctgaaggtccagctgaaggttttattgaccccagtacagagaaaacccggacagtacctctagagattatggtggttggtgaaaaagcaccattctacggagaaactttggaagatcttggtctatacaaggctcaaacaagactacctttcaatgcttttggaacaatggccatggctagagaagaatttgagaataactctgcctcaagtcaggtgttttggttgctgaaagaaagtgaactgactcctagcaacgccaatatattggatggtcgatatgctgtgttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="65488" stop="67568"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65788" g_stop="65936" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65937" i_stop="66321" i_length="385">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66322" g_stop="66464" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="292" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66465" i_stop="66989" i_length="525">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66990" g_stop="67061" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="364" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67062" i_stop="67163" i_length="102">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67164" g_stop="67268" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="469" r_length="105" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E287750" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E287750" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65788" e_stop="65936"/>
          <exon e_start="66322" e_stop="66464"/>
          <exon e_start="66990" e_stop="67061"/>
          <exon e_start="67164" e_stop="67268"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATATGAAGGTCAAAGTCAAAGACAATCCCAACCTGGAGGAATGCGTATTTCGTATTGTTCTAGATGGATATAATGCTCCAGTTACTGCTGGAAATTTTATAGACTTGGTCGAGAGGCATTTCTATGATGGCATGGATATTCAAAGAGGTGAGCTTATGATTTTTGCTCTGTTCTTGCGAATCAATGAAACAAATAAAACTGTCTATGCATCAAACAAGGAATGTTGTCCGTGTATGGTCCAGTGGTTTGAGCTTGGAATTTCCATGTTGGAGGTCTCAAGTTCGAAACCCCTTGCCAGCAAAGCAAGGGGTTTGCCTTCTGGGTCGAGCTCGTTGCACCAGGCTTGCCTAGTGCGGGTTACCTCTCTTATGTGGTTTGCGAGCTATTGCATAGGAGCGGAGTTTTACCCTGTGCGCACCCAAAAGGGTAGCGGCTGCGGGTTTCCCTTGTCGTGTAAAAAAAAAAAAGGGATGTCCGTGTAGTTTGTGACCTGAATATGTTCTTGAAACTCATTATTGTGGATGTTCTGCAGCGGATGGATTTGTGGTACAAACAGGAGATCCTGAAGGTCCAGCTGAAGGTTTTATTGACCCCAGTACAGAGAAAACCCGGACAGTACCTCTAGAGATTATGGTGGTTGGTGAAAAAGCACCATTCTACGGAGAAACTTTGGAAGTAAGTTCATGTTATTGTCATTTTGCTGCCTCTAAATTTAACTTTTTGGTGTCCTACTCCTGATCACTTCTCTCCAATTGCTCAGTAGAAGCTATAAACAGTATAAGAGTAGACGTTGTCAGCCAGGCTATCATATATGGATTATACATTTATACCCAGTTTATTGAGATGGTCTTAGAAATTACCATAGACCTGTAATTGTGGAGAGAAAGATCACTTGCCCCAGCATTTGGGCCATTGGCATGCCTGCTCTTGCATAGATCTCACTCCTCAATTCATCCATAGAGTAGGACTCCATGTTGAGAAATGGATTTATATTCCCTCAGCACTAAACTTTCCCTACTTACGCCATCACAGATTCACAGCCTTAAACAAGAAAATTCTCCGTTATACTAAACCAGCGAAAATGTTTCTGATACACTCAACAAAGGTTTCATATTTGCCTTTATCATGGTATTCTTCTCTTCACTTTATATTCCTTGTTATTCCTTCTGTTTTAATAAGGCTCTGGAATTATTTCTACAGGATCTTGGTCTATACAAGGCTCAAACAAGACTACCTTTCAATGCTTTTGGAACAATGGCCATGGCTAGAGAAGTGAGATACCTTTACTTTTGATGTTGCATCTGCTTATTTCATGTAACTTTATTTGATGACCTTTATATTTGTTAAAACTCATTGGATTATGGGCGCTTACAGGAATTTGAGAATAACTCTGCCTCAAGTCAGGTGTTTTGGTTGTTGAAAGAAAGTGAACTGACTCCTAGCAACGCCAATATATTGGATGGTCGATATGCTGTGTTT</genome_strand>
        <mrna_strand>GGATATGAAGGTCAAAGTCAAAGACAATCCCAACCTGGAGGAATGCGTATTTCGTATTGTTCTAGATGGATATAATGCTCCAGTTACTGCTGGAAATTTTATAGACTTGGTCGAGAGGCATTTCTATGATGGCATGGATATTCAAAGAG.................................................................................................................................................................................................................................................................................................................................................................................................CGGATGGATTTGTGGTACAAACAGGAGATCCTGAAGGTCCAGCTGAAGGTTTTATTGACCCCAGTACAGAGAAAACCCGGACAGTACCTCTAGAGATTATGGTGGTTGGTGAAAAAGCACCATTCTACGGAGAAACTTTGGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTTGGTCTATACAAGGCTCAAACAAGACTACCTTTCAATGCTTTTGGAACAATGGCCATGGCTAGAGAA......................................................................................................GAATTTGAGAATAACTCTGCCTCAAGTCAGGTGTTTTGGTTGCTGAAAGAAAGTGAACTGACTCCTAGCAACGCCAATATATTGGATGGTCGATATGCTGTGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E538230" ref_strand="+" ref_description="SGN-E538230 [TUS-57-E12](-)">
      <seq>cgaaggagagatttgtcccagttctgtaatgagtatgctgtcccaagagacaaaatagagcatttcaaggatgtcacggcacatgatattgtctgttcgcagaaaagtagcagtgagacacttaatgaagaggatgttgctgtgaccaatgtcaggatagatctgacacgcgggaggcataatccgcttgaaagtatccattttttcaaggattatgaaagtgaggagaagttctctatacctgatgatcgcatcagccacttgctgccatcatcatatcaagatatgattgtgagagtctactccaaaaagccccacctggtggaagctatttctgatgcatttgaaaatttccagttaaagacttatggaataaaagcacaggttcatgcaacacctgagaagaaaaaacgccgtgtatgatatttccccagtcatcactacaaaatccacagtagatatatgtgattatagtatatctcaagcaacatattacagtccatttgtacagaagtctttaaatgacacgtgaaaggcctctcaagagttatactagagtttttgtagaaagttgctaccatttactggatatgataatatcctccgagtactctcaacaatttcttgtatcctagcattactcgaaaaatggatttcttggtataaccgacttctgaatattacagaagctgatgcttttataaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="69958" stop="53863"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69658" g_stop="69638" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="21" r_length="21" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69637" i_stop="69540" i_length="98">
            <donor d_prob="0.873" d_score="0.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69539" g_stop="69459" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="102" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69458" i_stop="69389" i_length="70">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="69388" g_stop="69297" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="194" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="69296" i_stop="69159" i_length="138">
            <donor d_prob="0.470" d_score="1.00"/>
            <acceptor a_prob="0.434" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="69158" g_stop="69143" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="210" r_length="16" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="69142" i_stop="69034" i_length="109">
            <donor d_prob="0.990" d_score="0.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="69033" g_stop="68923" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="321" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="68922" i_stop="68831" i_length="92">
            <donor d_prob="0.408" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="68830" g_stop="68448" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="704" r_length="383" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="68447" i_stop="68080" i_length="368">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="68079" g_stop="68052" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="705" r_stop="732" r_length="28" r_score="0.786"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E538230" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>732</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E538230" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69658" e_stop="69638"/>
          <exon e_start="69539" e_stop="69459"/>
          <exon e_start="69388" e_stop="69297"/>
          <exon e_start="69158" e_stop="69143"/>
          <exon e_start="69033" e_stop="68923"/>
          <exon e_start="68830" e_stop="68448"/>
          <exon e_start="68079" e_stop="68052"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAGGAGAGATTTGTACCAGGTACTGAGGTTATCTAATGGGTGTTGATTAAGCAGGTTATATGAGTATTATGGGATGTTTGAAGTTTACGGGTTAATTCTTGTTTTTGCACATTGCAGTTCTGTAATGAGTATGCTGTCCCAAGAGACAAAATAGAGCATTTCAAGGATGTCACGGCACATGATATTGTCTGTTCGCAGGTAGCTAACATATAGTAGTCTGTTTTTGGGAGTCTTTAATATTTCTATGGTAATAATCATTATCTTACAGAAAAGTAGCAGTGAGACACTTAATGAAGAGGATGTTGCTGTGACCAATGTCAGGATAGATCTGACACGCGGGAGGCATAATCCGCTTGAAAGGTTGGTCAAAATGGGTCATCCTATGCAGTTCTTGCACTTGCATGCAATTTCTCTATCCCTCTCCTCCACTTTTATTATCATTCTGAACCTTTCAATTTATTTTCTTTGTATGCTGGTTGGACGTGTTGCCTCTGCCAGTATCCATTTTTTCAAGGTACAGACTATGGGTTCTACAAGTTTGATCATCAAAATCTATTACTTTTCTTGTCTGCATGTTTTTCATCTTTCCCGACCTCACTCTTAATGATTTGATTGAAATTCAGGATTATGAAAGTGAGGAGAAGTTCTCTATACCTGATGATCGCATCAGCCACTTGCTGCCATCATCATATCAAGATATGATTGTGAGAGTCTACTCCAAAAAGCCCCACCTGGTCTGTCCAGATAACGAGTATGCATTTGTTTTTTGCGTTCTTCTCCATCAAAGTCTGATCTCAGTTTTTTTGTATCCTACTCAAATTTTCAGGTGGAAGCTATTTCTGATGCATTTGAAAATTTCCAGTTAAAGACTTATGGAATAAAAGCACAGGTTCATGCAACACCTGAGAAGAAAAAACGCCGTGTATGATATTTCCCCAGTCATCACTACAAAATCCACAGTAGATATATGTGATTATAGTATATCTCAAGCAACATATTACAGTCCATTTGTACAGAAGTCTTTAAATGACACGTGAAAGGCCTCTCAAGAGTTATACTAGAGTTTTTGTAGAAAGTTGCTACCATTTACTGGATATGATAATATCCTCCGAGTACTCTCAACAATTTCTTGTATCCTAGCATTACTCGAAAAATGGATTTCTTGGTATAACCGACTTCTGAATATTACAGAAGCTGATGCTTTTATAATACCTTCTCTTTCTACTTGGTGGTTGGTGAATGAATATATGTTAAGAGGATTTGATGTAGCTAAAGTTTGTTTATGTGCTGGTTTTTGAAGGAAAGAGCAACAGTTCTATTCATGATGAGTACCATCTATGAAAATAAAGTTGCAACTGCGAAAGGTAACTAAAACTCTGAGATTCATAACTTAGTGTTGTAGCAAGAAGCAATATTTGATGGAGGTTACGTATATTCTTGGCATTCTTTTATTTCTGCCGCATATAGAAAAGTATTCATCTCTATACTCGGTTATATTGTTTTTTTTATCTTCTTCGCTTCCTTATTTTTTCAGGGTTTTATAATTGTTGATCCTTCTAGATTCAGAATCCATTTTGATAAAAAGAAAAAAAAAAACAAATTGAA</genome_strand>
        <mrna_strand>CGAAGGAGAGATTTGTCCCAG..................................................................................................TTCTGTAATGAGTATGCTGTCCCAAGAGACAAAATAGAGCATTTCAAGGATGTCACGGCACATGATATTGTCTGTTCGCAG......................................................................AAAAGTAGCAGTGAGACACTTAATGAAGAGGATGTTGCTGTGACCAATGTCAGGATAGATCTGACACGCGGGAGGCATAATCCGCTTGAAAG..........................................................................................................................................TATCCATTTTTTCAAG.............................................................................................................GATTATGAAAGTGAGGAGAAGTTCTCTATACCTGATGATCGCATCAGCCACTTGCTGCCATCATCATATCAAGATATGATTGTGAGAGTCTACTCCAAAAAGCCCCACCTG............................................................................................GTGGAAGCTATTTCTGATGCATTTGAAAATTTCCAGTTAAAGACTTATGGAATAAAAGCACAGGTTCATGCAACACCTGAGAAGAAAAAACGCCGTGTATGATATTTCCCCAGTCATCACTACAAAATCCACAGTAGATATATGTGATTATAGTATATCTCAAGCAACATATTACAGTCCATTTGTACAGAAGTCTTTAAATGACACGTGAAAGGCCTCTCAAGAGTTATACTAGAGTTTTTGTAGAAAGTTGCTACCATTTACTGGATATGATAATATCCTCCGAGTACTCTCAACAATTTCTTGTATCCTAGCATTACTCGAAAAATGGATTTCTTGGTATAACCGACTTCTGAATATTACAGAAGCTGATGCTTTTATAA................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E745146" ref_strand="+" ref_description="SGN-E745146 [GI|47105982]">
      <seq>ggttgttttctctgtgctgtgtagagtggtgaagtagagagcccaagggtgagtatgggagctttttcaaatgaagaacttagtttctcttccaatttcgacttcgcttcctctcaggatctcagattctctaagcaaatccatgacaacgttcacggcaacatctacatcgacccgctctacttgaagttcattgacacagaacaatttcaaaggcttcgtgatcttaaacaactaggtgtgacacacatggtctatccaggagcagtgcattctagatttgagcattcccttggagtgtattggcttgccaatgaagctgtccataagcttaaaacccaccaaggtatggagcttggaattgatcactttgatatacaaacagtgaaacttgcaggtcttctacatgatattggacatggaccttttagccacttgtttgaacgcgagtttcttcctcaagtttgcaatggattggactggtctcatgagcaaatgtctgtggacatgattgatcacattgttgatgagcgtcgtattgatattgattctggaaccattaaaagggtcaaggaaatgatacttgctagttccaagtttacgttgacaaaaagctcaagggagaagcagttcttatatgatattgtggctaatggtcgaaatggagtcgatgttgacaagtttgattacattgtccgagatagccgtgcgtgtgcagtaggatgcaattttcaatttgagaggttgatggaaactatgagagtattgggagatgagatatgttatcgagccaaagattatttaaccatccacaagttatttgccacacgagctgatctacacagaactgtttatactcacgctaaagtgaaggcaatagagcttatgattgtagatgcactagtgaaagcaaatgattatctacacatatcatcacatatagagcatccttctcaatactggaaggtcggcatggtctttttgttagcttcaacctccttaattcatggaaccatgaaaataatttctctgtgtatgtggaagtagttagatgacaccattttaaaaaccatcgagactgctccagacccggaactgaaggaatctagggatttgatccttcgtgtccgaaggagagatttgtaccagttctgtaatgagtatgctgtcccaagagacaaaatagagcatttcaaggatgtcacggcacatgatattgtctgttcgcagaaaagtagcagtgagacacttaatgaagaggatgttgctgtgaccaatgtcaggatagatctgacacgcgggaggcataatccgcttgaaagtatccattttttcaaggattatgaaagtgaggagaagttctctatacctgatgatcgcatcagccacttgctgccatcatcatatcaagatatgattgtgagagtctactccaaaaagccccacctggtggaagctatttctgatgcatttgaaaatttccagttaaagacttatggaataaaagcacaggttcatgcaacacctgagaagaaaaaacgccgtgtatgatatttccccagtcatcactacaaaatccacagtagatatatgtgattatagtatatctcaagcaacatattacggtccatttgtacagaagtctttaaatgacacgtgaaaggcctctcaagagttatactagagtttttgtagaaagttgctaccatttactggatatgataatatcctccgagtactctcaacaatttcttgtatcctagcattactcgaaaaatggatttcttggtataaccgacttctgaatattacagaagctgatgcttttatagtaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75422" stop="53875"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75123" g_stop="74947" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74946" i_stop="73980" i_length="967">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.915" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73979" g_stop="73942" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="215" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73941" i_stop="73708" i_length="234">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.964" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73707" g_stop="73685" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="238" r_length="23" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="73684" i_stop="72820" i_length="865">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="0.908" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="72819" g_stop="72713" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="345" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="72712" i_stop="72627" i_length="86">
            <donor d_prob="0.864" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="72626" g_stop="72575" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="397" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="72574" i_stop="72489" i_length="86">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.938" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="72488" g_stop="72404" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="398" r_stop="482" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="72403" i_stop="71711" i_length="693">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="71710" g_stop="71620" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="573" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="71619" i_stop="70821" i_length="799">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="70820" g_stop="70782" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="574" r_stop="612" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="70781" i_stop="70585" i_length="197">
            <donor d_prob="0.822" d_score="0.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="70584" g_stop="70517" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="613" r_stop="680" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="70516" i_stop="70424" i_length="93">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="70423" g_stop="70361" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="681" r_stop="743" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="70360" i_stop="70256" i_length="105">
            <donor d_prob="0.939" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="70255" g_stop="70200" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="744" r_stop="799" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="70199" i_stop="70120" i_length="80">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="70119" g_stop="70046" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="800" r_stop="873" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="70045" i_stop="69914" i_length="132">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="69913" g_stop="69638" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="874" r_stop="1149" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="69637" i_stop="69540" i_length="98">
            <donor d_prob="0.873" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="69539" g_stop="69459" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1150" r_stop="1230" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="69458" i_stop="69389" i_length="70">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="69388" g_stop="69297" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1231" r_stop="1322" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="69296" i_stop="69159" i_length="138">
            <donor d_prob="0.470" d_score="1.00"/>
            <acceptor a_prob="0.434" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="69158" g_stop="69143" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="1323" r_stop="1338" r_length="16" r_score="1.000"/>
        </exon>
        <intron i_serial="16">
          <gDNA_intron_boundary i_start="69142" i_stop="69034" i_length="109">
            <donor d_prob="0.990" d_score="0.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="17">
          <gDNA_exon_boundary g_start="69033" g_stop="68923" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1339" r_stop="1449" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="17">
          <gDNA_intron_boundary i_start="68922" i_stop="68831" i_length="92">
            <donor d_prob="0.408" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="18">
          <gDNA_exon_boundary g_start="68830" g_stop="68447" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1450" r_stop="1833" r_length="384" r_score="0.995"/>
        </exon>
        <intron i_serial="18">
          <gDNA_intron_boundary i_start="68446" i_stop="68072" i_length="375">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="19">
          <gDNA_exon_boundary g_start="68071" g_stop="68057" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="1834" r_stop="1848" r_length="15" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E745146" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1848</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E745146" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75123" e_stop="74947"/>
          <exon e_start="73979" e_stop="73942"/>
          <exon e_start="73707" e_stop="73685"/>
          <exon e_start="72819" e_stop="72713"/>
          <exon e_start="72626" e_stop="72575"/>
          <exon e_start="72488" e_stop="72404"/>
          <exon e_start="71710" e_stop="71620"/>
          <exon e_start="70820" e_stop="70782"/>
          <exon e_start="70584" e_stop="70517"/>
          <exon e_start="70423" e_stop="70361"/>
          <exon e_start="70255" e_stop="70200"/>
          <exon e_start="70119" e_stop="70046"/>
          <exon e_start="69913" e_stop="69638"/>
          <exon e_start="69539" e_stop="69459"/>
          <exon e_start="69388" e_stop="69297"/>
          <exon e_start="69158" e_stop="69143"/>
          <exon e_start="69033" e_stop="68923"/>
          <exon e_start="68830" e_stop="68447"/>
          <exon e_start="68071" e_stop="68057"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTGTTTTCTCTGTGCTGTGTAGAGTGGTGAAGTAGAGAGCCCAAGGGTGAGTATGGGAGCTTTTTCAAATGAAGAACTTAGTTTCTCTTCCAATTTCGACTTCGCTTCCTCTCAGGATCTCAGATTCTCTAAGCAAATCCATGACAACGTTCACGGCAACATCTACATCGACCCGGTATGTTGCTGTCTCTCACTCTCTGCTGGCTAGTTAACTTTCTACATTTCTGTACATGCTTTGCTTATACCTGCACTGTTTGAATTTATAGGTAGTTAGTTTTTCTTTTGTTTTGGTTCTAAGAGCAATCACAAATGTGTATGCTACACTAGTTTTCTGTGCTATCTAATAGCCAAAAGTGTACTACTATTTTAAAGGAAATTGATAACTGTCAATGAGATAAATGAGAATTCAGAGCTATTTTAAGTTGCACTTCATACATTTTTATTATCCACAGTTTTCTATGGGTAAGTCAGTGCCGAAATTGTACTCGCAAATTAGCCAAAATTGTTAACCGTCAGACTGAATAAATGAGTTCAAAACTATTTTGAATATCAATTCATAAATTTTTGTTATCCACAATTTTCTTAAAATTTTTCAACAAATAAAAAAAAAGTTATCTAGAATGCTTGTGACTTCCAATGTTCAAAGAAAAAAGTTATCTAGAACGCTTGTGCCAAAATTTTGATTTTGTTTCATTTAATGAAACATTAGTGACCATGTGACCATAACAATTAACAAGAGAAGATGATTTTTTCTTCATTCATGATTTATTCGAGAAGCATATAAGGTCAAAATTCATAAGTTTGTTTTGCTGGTAAGAATGGATCGATCTTAAAAGAATGATAGCAACAAAGTGTTTTCCCACACTGTCCTTGGTTAACCTGTGACACAATCCTCTTTCAGCTTTCAGGCTAAAACATGTATTTTATCCAATAGATCAATGAGTTGTTATTCGCCCGTATTTATTTATTAGTATGTGATTGTTTACCAGGCAAGAGAGACACTGGGGTGTGGAGGTTACTGTTTTCTCATTGTGATATCAGATCTACACTCTTATTTTCACTATTCTTATACATTTTCTTTAACTTCTTATTGAGAGCTTTGTGCAAACTACTGGAAGTTTATTCTTTTCTGAACTTTGCAGCTCTACTTGAAGTTCATTGACACAGAACAATTTCAAAGGCAAGTTTCCTTATCATCTACTTCTAGTAGTGTAGTATTAGTGGTAGATCTCAGTTTATTGCATCCCTACTATAAATCTATGTACTTTTCGAGTATATGTTTTCATATTGGCTGCAATTTGCCTATGACCTGATAGTCATCTTTTATTTTCTTTTATTTTCGTTTGTATGTTCAACACTTTATCATGAGAGCTTTACTAGAATTATTGAACTGTTTTTTTCTTTTGTTTTCCAGGCTTCGTGATCTTAAACAACTAGGTAAGTTACTATCCTTGTTCCCTATTTGCATACCTGGTCGCAAGCTTGTTTATGCTAGAACATCAAATTTAGCCTTGTGATTCAAAATGGGATATGAAGAAGTTTTCTTATCTATCATCTACGTGTCCGCTGAAATGTGGCATTTAGTTCTTTCATATTGCAAAATTATTACTAGTAAAATGTGGGATGACATAAAAGATGTAACTAACCTGTATTTTATTTGTCTTAATGTGAGTTGTTTTGGTTATCAAAACTATGATAAAATTGATAACTATCTTTGCCTCTTAAATATGTTCTGACATTATCTGCAACTTTCAGCTTCACTTTGTGATTAGCGGTGACACTTGAACGTATAAATAGTCTGTTTCAACTTCAGTGGTATCTAAATTGTGGTTGCATTGGTGACTGTCGTCGGATCCTTGTAAGGTCTTACGATAATTGCAAAGATATCTTGTTTCTTAGTGTCCTATGAAGACATATCTATATAGGTTATTCAAATTCTGGATATTCGTGTAAATGATGACTTAAGAACTCAAAATTAGCTTTTAAAGCCCTGCATGCATATTTCCCATACAAGCCTCTTGCAGAGGCTGAAGCAAGCCCAAGGTTACAAGCCTAGATGCAAGTTACAAAAAGGCTATATGGTCTCCTATTGCTCAATGGGTAAATTTCACCCTCTCTTAAAATGAGATCCATGTTATCTGTTCAAGAAGTTTAAATCATCCATCTTCCAATCAGTACTTGATGCAGCCACTGGCTCTTACTGTTGTGCTCAATGTTGGTGGAAACATTGTAAGTCTAGGAGTTAACAGCCTGGTAGTGGCTTGAATTTGTTACTAATATGAGCTCTTGTATTCACTTTAAGGTGTGACACACATGGTCTATCCAGGAGCAGTGCATTCTAGATTTGAGCATTCCCTTGGAGTGTATTGGCTTGCCAATGAAGCTGTCCATAAGCTTAAAACCCACCAAGTATTAATTTGTTTATACTATTATTTTGGTTTCTCAACTTGACATACCTGAGGGGTTGTTATGTAATCCTAGTGTTCCTTTTACAGGGTATGGAGCTTGGAATTGATCACTTTGATATACAAACAGTGAAACTTGCAGGTAAGTGATATGGAATGCCTTGTGCATGGATGCTCTTCCTAATGCAGAATAATGAACTTCCATTCCATTGTGGTTGAATTTCTTAGGTCTTCTACATGATATTGGACATGGACCTTTTAGCCACTTGTTTGAACGCGAGTTTCTTCCTCAAGTTTGCAATGGATTGGACTGGTAATACTTTACTGTGGAATGAATTCTGTTATTTGGATACCTCTCAAGATATATGTCACATTCTCATGCTATTCAATTTTTTTTTTTTGAAATAGATGCTATTCAATTTTTTTTTTTTTTTTGAAATAGATGATATTCAATTTTTCTTGGCTAATAAGAGTTGAATTTTTGACATTTCCAATTCCCTGCAACGTACTTGATCTTAGCAAGAATCTTCTACTTTTAGTAAAGGCTTGAAGTGATCAAATAAGGAAGAAATGAATTTTTACTTTTTTAGAGTGGGAATGTTTTCATATTGGATTATTGGCAAGTCTTTAGGAAAGCTCTAGTTTTGCCCTTTTAACTTCAATAAATCAATATATTTCTATCCCAAACTAGTTGGACAGTTTTATCATTTAATCATAGAAAATAAAGTTATGCTTACAGCATACATTATGTGGTAGAAATCCTAAAGTTGTAATTAATCATGGTGGAGGACCTTGGCATATGATGATTTTGTTTAGTTGTTTCCAACTGTTTGTGTCTGCTCTTGCCTGCTGGTTGTAGTGTTGATATTGAGAAAATATTTCCTAGTTAACTATCTTAATGTTTTTGTTGTTCAAGTTTCTTTGAAGCTTCTTGCACTCATAATGAGGTGATGTCATTATTTTAGTATAGTGCATATTAATGACCTTGTCTTATGTTTTATTTTAGGTCTCATGAGCAAATGTCTGTGGACATGATTGATCACATTGTTGATGAGCGTCGTATTGATATTGATTCTGGAACCATTAAAAGGGTCAAGGTAAGATGAATTATTTTGATTTATGCTAGTTGATATCATACGAGATGAGAATGGTAATTTGCTTATAACATGTAGTATTTGTCAGTTTCAAAAAAAAAAAAAAATCCCTCTGTTTCAACTTGATTGTCCTATTTTGTAGAATGTACCAAATTGTCTTTTAAACTTGTGGTCTTAAACATGCTTTGTGAAAATTTATAATTAAAGAGTTGCCATAAAAGGGAAGAGTCATTTTTTTAAAAAATGGACTCAAACGGAAAGTAGGACTAACAAACTGAAATGGAGGGAGTATGAAGTATTTGTGCAAACTTGTATCGTCTCCAGAAGCAATTTGAATTTTAGGTGCTACTCAAGTATGGCAGACACGTGGAACTTTGTCAGCTATTGGCTGAAAGAGAATTTGTATGTGTGGAACTAAAACCTGCAAAGAGATAGCTTCTTTCATTAAATTCTCTTGAGCTACTAGTAAGAAAAAGCTTCTGCTGATTTGCAATGCTCTTCTTTACTATGCTTTTCAATGGTAACTAATGTCAAATTTTAGTGAACGAATTCTTTGACCAAAGTTATGACTATACGTTGGTTGAGATAATAAAGTTATTCACCATTCATGTGAGTTATTATTACTTCATGCAAATTCTATGACCAAGCTATGACTATGTTCGTTGAGATATTCATGTGAGTTACTATTCTTCATACAGCTAAAAGCAAATTGATTGTACATGCCACAAGTCATCATAAGACTTGTTTATATTGTAAGCAGGAAAAATTTTAAACGTGGCCTTTTGACCTCTATATTTGACAGGAAATGATACTTGCTAGTTCCAAGTTTACGTTGACAAAAGTAAGTCCTTCTCTTTCCATTTTCCAGCACATAGTTATCAGGAGGAAAAAAAACGTGATTCTTGCAATTTGACTGTTTTCATTTGACATGCATTTGCACTTCAATCTGGAATTTTTAGCTTTTTCTGCTCATCATTTCACATCATATTCCATTTTTGAAACTTGTGCACTGCTTCAATTTGATTGATTAATATGTAGAGCTCAAGGGAGAAGCAGTTCTTATATGATATTGTGGCTAATGGTCGAAATGGAGTCGATGTTGACAAGTTGGTTTCTAAACTATAGATTATTCTCTTCTCTTTTTTTTCCAACCTATTCTTTTCCAGCTTTCACCGGATGAAGCTTTCTTTGGTTTGCAGGTTTGATTACATTGTCCGAGATAGCCGTGCGTGTGCAGTAGGATGCAATTTTCAATTTGAGAGGTCTTCTCTTTCATCTTTTTGTCTATTGTGAATCGACATCTTTTCACAAATATCGAGAGAAAGGGAAAATAATTCTTTACCGTGAACTGTATTCATTTTCTGTAGGTTGATGGAAACTATGAGAGTATTGGGAGATGAGATATGTTATCGAGCCAAAGATTGTTAGTACTCAACTCTAACCAATATCTTATTTATTTTTGTTTGACTTCTGGTCTTATTATTTGTGTGGATAAATCCTCAGATTTAACCATCCACAAGTTATTTGCCACACGAGCTGATCTACACAGAACTGTTTATACTCACGCTAAAGTGAAGGTACATAGCTAATTTGACGAAGTTGTGCACTGATTTTCTCACCAGCATATCTGAAATGTGGAAGTTATCATTTTGTATGTCATATTTAAGTATGTACACATTTTCAATTTGTTTTCCCATATCATTGTACAGGCAATAGAGCTTATGATTGTAGATGCACTAGTGAAAGCAAATGATTATCTACACATATCATCACATATAGAGCATCCTTCTCAATACTGGAAGGTCGGCATGGTCTTTTTGTTAGCTTCAACCTCCTTAATTCATGGAACCATGAAAATAATTTCTCTGTGTATGTGGAAGTAGTTAGATGACACCATTTTAAAAACCATCGAGACTGCTCCAGACCCGGAACTGAAGGAATCTAGGGATTTGATCCTTCGTGTCCGAAGGAGAGATTTGTACCAGGTACTGAGGTTATCTAATGGGTGTTGATTAAGCAGGTTATATGAGTATTATGGGATGTTTGAAGTTTACGGGTTAATTCTTGTTTTTGCACATTGCAGTTCTGTAATGAGTATGCTGTCCCAAGAGACAAAATAGAGCATTTCAAGGATGTCACGGCACATGATATTGTCTGTTCGCAGGTAGCTAACATATAGTAGTCTGTTTTTGGGAGTCTTTAATATTTCTATGGTAATAATCATTATCTTACAGAAAAGTAGCAGTGAGACACTTAATGAAGAGGATGTTGCTGTGACCAATGTCAGGATAGATCTGACACGCGGGAGGCATAATCCGCTTGAAAGGTTGGTCAAAATGGGTCATCCTATGCAGTTCTTGCACTTGCATGCAATTTCTCTATCCCTCTCCTCCACTTTTATTATCATTCTGAACCTTTCAATTTATTTTCTTTGTATGCTGGTTGGACGTGTTGCCTCTGCCAGTATCCATTTTTTCAAGGTACAGACTATGGGTTCTACAAGTTTGATCATCAAAATCTATTACTTTTCTTGTCTGCATGTTTTTCATCTTTCCCGACCTCACTCTTAATGATTTGATTGAAATTCAGGATTATGAAAGTGAGGAGAAGTTCTCTATACCTGATGATCGCATCAGCCACTTGCTGCCATCATCATATCAAGATATGATTGTGAGAGTCTACTCCAAAAAGCCCCACCTGGTCTGTCCAGATAACGAGTATGCATTTGTTTTTTGCGTTCTTCTCCATCAAAGTCTGATCTCAGTTTTTTTGTATCCTACTCAAATTTTCAGGTGGAAGCTATTTCTGATGCATTTGAAAATTTCCAGTTAAAGACTTATGGAATAAAAGCACAGGTTCATGCAACACCTGAGAAGAAAAAACGCCGTGTATGATATTTCCCCAGTCATCACTACAAAATCCACAGTAGATATATGTGATTATAGTATATCTCAAGCAACATATTACAGTCCATTTGTACAGAAGTCTTTAAATGACACGTGAAAGGCCTCTCAAGAGTTATACTAGAGTTTTTGTAGAAAGTTGCTACCATTTACTGGATATGATAATATCCTCCGAGTACTCTCAACAATTTCTTGTATCCTAGCATTACTCGAAAAATGGATTTCTTGGTATAACCGACTTCTGAATATTACAGAAGCTGATGCTTTTATAATACCTTCTCTTTCTACTTGGTGGTTGGTGAATGAATATATGTTAAGAGGATTTGATGTAGCTAAAGTTTGTTTATGTGCTGGTTTTTGAAGGAAAGAGCAACAGTTCTATTCATGATGAGTACCATCTATGAAAATAAAGTTGCAACTGCGAAAGGTAACTAAAACTCTGAGATTCATAACTTAGTGTTGTAGCAAGAAGCAATATTTGATGGAGGTTACGTATATTCTTGGCATTCTTTTATTTCTGCCGCATATAGAAAAGTATTCATCTCTATACTCGGTTATATTGTTTTTTTTATCTTCTTCGCTTCCTTATTTTTTCAGGGTTTTATAATTGTTGATCCTTCTAGATTCAGAATCCATTTTGATAAAAAGAAAAAAAAAAACAAA</genome_strand>
        <mrna_strand>GGTTGTTTTCTCTGTGCTGTGTAGAGTGGTGAAGTAGAGAGCCCAAGGGTGAGTATGGGAGCTTTTTCAAATGAAGAACTTAGTTTCTCTTCCAATTTCGACTTCGCTTCCTCTCAGGATCTCAGATTCTCTAAGCAAATCCATGACAACGTTCACGGCAACATCTACATCGACCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTACTTGAAGTTCATTGACACAGAACAATTTCAAAG..........................................................................................................................................................................................................................................GCTTCGTGATCTTAAACAACTAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGACACACATGGTCTATCCAGGAGCAGTGCATTCTAGATTTGAGCATTCCCTTGGAGTGTATTGGCTTGCCAATGAAGCTGTCCATAAGCTTAAAACCCACCAA......................................................................................GGTATGGAGCTTGGAATTGATCACTTTGATATACAAACAGTGAAACTTGCAG......................................................................................GTCTTCTACATGATATTGGACATGGACCTTTTAGCCACTTGTTTGAACGCGAGTTTCTTCCTCAAGTTTGCAATGGATTGGACTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCATGAGCAAATGTCTGTGGACATGATTGATCACATTGTTGATGAGCGTCGTATTGATATTGATTCTGGAACCATTAAAAGGGTCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATGATACTTGCTAGTTCCAAGTTTACGTTGACAAAA.....................................................................................................................................................................................................AGCTCAAGGGAGAAGCAGTTCTTATATGATATTGTGGCTAATGGTCGAAATGGAGTCGATGTTGACAA.............................................................................................GTTTGATTACATTGTCCGAGATAGCCGTGCGTGTGCAGTAGGATGCAATTTTCAATTTGAGAG.........................................................................................................GTTGATGGAAACTATGAGAGTATTGGGAGATGAGATATGTTATCGAGCCAAAGATT................................................................................ATTTAACCATCCACAAGTTATTTGCCACACGAGCTGATCTACACAGAACTGTTTATACTCACGCTAAAGTGAAG....................................................................................................................................GCAATAGAGCTTATGATTGTAGATGCACTAGTGAAAGCAAATGATTATCTACACATATCATCACATATAGAGCATCCTTCTCAATACTGGAAGGTCGGCATGGTCTTTTTGTTAGCTTCAACCTCCTTAATTCATGGAACCATGAAAATAATTTCTCTGTGTATGTGGAAGTAGTTAGATGACACCATTTTAAAAACCATCGAGACTGCTCCAGACCCGGAACTGAAGGAATCTAGGGATTTGATCCTTCGTGTCCGAAGGAGAGATTTGTACCAG..................................................................................................TTCTGTAATGAGTATGCTGTCCCAAGAGACAAAATAGAGCATTTCAAGGATGTCACGGCACATGATATTGTCTGTTCGCAG......................................................................AAAAGTAGCAGTGAGACACTTAATGAAGAGGATGTTGCTGTGACCAATGTCAGGATAGATCTGACACGCGGGAGGCATAATCCGCTTGAAAG..........................................................................................................................................TATCCATTTTTTCAAG.............................................................................................................GATTATGAAAGTGAGGAGAAGTTCTCTATACCTGATGATCGCATCAGCCACTTGCTGCCATCATCATATCAAGATATGATTGTGAGAGTCTACTCCAAAAAGCCCCACCTG............................................................................................GTGGAAGCTATTTCTGATGCATTTGAAAATTTCCAGTTAAAGACTTATGGAATAAAAGCACAGGTTCATGCAACACCTGAGAAGAAAAAACGCCGTGTATGATATTTCCCCAGTCATCACTACAAAATCCACAGTAGATATATGTGATTATAGTATATCTCAAGCAACATATTACGGTCCATTTGTACAGAAGTCTTTAAATGACACGTGAAAGGCCTCTCAAGAGTTATACTAGAGTTTTTGTAGAAAGTTGCTACCATTTACTGGATATGATAATATCCTCCGAGTACTCTCAACAATTTCTTGTATCCTAGCATTACTCGAAAAATGGATTTCTTGGTATAACCGACTTCTGAATATTACAGAAGCTGATGCTTTTATAGT.......................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E323877" ref_strand="+" ref_description="SGN-E323877 [cTOC-5-J12]">
      <seq>ggagatgagatatgttatcgagccaaagattatttaaccatccacaagttatttgccacacgagctgatctacacagaactgtttatactcacgctaaagtgaaggcaatagagcttatgattgtagatgcactagtgaaagcaaatgattatctacacatatcatcacatatagagcatccttctcaatactggaaggtcggcatggtctttttgttagcttcaacctccttaattcatggaaccatgaaaataatttctctgtgtatgtggaagtagatagatgacaccattttaaaaaccatcgagactgctccagacccggaactgaaggaatctagggatttgatccttcgtgtccgaaggagagatttgtaccagttctgtaatgagtatgctgtcccaagagacaaaatagagcatttcaaggatgtcacggcacatgatattgtctgttcgcagaaaagtagcagtgagacacttaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="70530" stop="69145"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70230" g_stop="70200" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70199" i_stop="70120" i_length="80">
            <donor d_prob="0.982" d_score="0.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70119" g_stop="70046" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="105" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70045" i_stop="69914" i_length="132">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="69913" g_stop="69638" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="381" r_length="276" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="69637" i_stop="69540" i_length="98">
            <donor d_prob="0.873" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="69539" g_stop="69459" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="462" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="69458" i_stop="69389" i_length="70">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="69388" g_stop="69365" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="463" r_stop="486" r_length="24" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E323877" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>486</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E323877" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70230" e_stop="70200"/>
          <exon e_start="70119" e_stop="70046"/>
          <exon e_start="69913" e_stop="69638"/>
          <exon e_start="69539" e_stop="69459"/>
          <exon e_start="69388" e_stop="69365"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGATGAGATATGTTATCGAGCCAAAGATTGTTAGTACTCAACTCTAACCAATATCTTATTTATTTTTGTTTGACTTCTGGTCTTATTATTTGTGTGGATAAATCCTCAGATTTAACCATCCACAAGTTATTTGCCACACGAGCTGATCTACACAGAACTGTTTATACTCACGCTAAAGTGAAGGTACATAGCTAATTTGACGAAGTTGTGCACTGATTTTCTCACCAGCATATCTGAAATGTGGAAGTTATCATTTTGTATGTCATATTTAAGTATGTACACATTTTCAATTTGTTTTCCCATATCATTGTACAGGCAATAGAGCTTATGATTGTAGATGCACTAGTGAAAGCAAATGATTATCTACACATATCATCACATATAGAGCATCCTTCTCAATACTGGAAGGTCGGCATGGTCTTTTTGTTAGCTTCAACCTCCTTAATTCATGGAACCATGAAAATAATTTCTCTGTGTATGTGGAAGTAGTTAGATGACACCATTTTAAAAACCATCGAGACTGCTCCAGACCCGGAACTGAAGGAATCTAGGGATTTGATCCTTCGTGTCCGAAGGAGAGATTTGTACCAGGTACTGAGGTTATCTAATGGGTGTTGATTAAGCAGGTTATATGAGTATTATGGGATGTTTGAAGTTTACGGGTTAATTCTTGTTTTTGCACATTGCAGTTCTGTAATGAGTATGCTGTCCCAAGAGACAAAATAGAGCATTTCAAGGATGTCACGGCACATGATATTGTCTGTTCGCAGGTAGCTAACATATAGTAGTCTGTTTTTGGGAGTCTTTAATATTTCTATGGTAATAATCATTATCTTACAGAAAAGTAGCAGTGAGACACTTAAT</genome_strand>
        <mrna_strand>GGAGATGAGATATGTTATCGAGCCAAAGATT................................................................................ATTTAACCATCCACAAGTTATTTGCCACACGAGCTGATCTACACAGAACTGTTTATACTCACGCTAAAGTGAAG....................................................................................................................................GCAATAGAGCTTATGATTGTAGATGCACTAGTGAAAGCAAATGATTATCTACACATATCATCACATATAGAGCATCCTTCTCAATACTGGAAGGTCGGCATGGTCTTTTTGTTAGCTTCAACCTCCTTAATTCATGGAACCATGAAAATAATTTCTCTGTGTATGTGGAAGTAGATAGATGACACCATTTTAAAAACCATCGAGACTGCTCCAGACCCGGAACTGAAGGAATCTAGGGATTTGATCCTTCGTGTCCGAAGGAGAGATTTGTACCAG..................................................................................................TTCTGTAATGAGTATGCTGTCCCAAGAGACAAAATAGAGCATTTCAAGGATGTCACGGCACATGATATTGTCTGTTCGCAG......................................................................AAAAGTAGCAGTGAGACACTTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E288496" ref_strand="+" ref_description="SGN-E288496 [cLES-8-M18]">
      <seq>ttatactcacgctaaagagaaggcaatagagcttatgattgtagatgcactagtgaaagcaaatgattatctacacatatcatcacatatagagcatccttctcaatactggaagtaagatgacaccattttaaaaaccatcgagactgctccagacccggaactgaaggaatctagggattagatccttcgtgtccgaaggagagaaatgtaccagttctgaaatgagtatgctgtcccaagagacaaaaaagagcatgtcaagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="70367" stop="69191"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70067" g_stop="70046" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="22" r_length="22" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70045" i_stop="69914" i_length="132">
            <donor d_prob="0.961" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69913" g_stop="69821" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="115" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69820" i_stop="69740" i_length="81">
            <donor d_prob="0.255" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="69739" g_stop="69638" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="217" r_length="102" r_score="0.961"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="69637" i_stop="69540" i_length="98">
            <donor d_prob="0.873" d_score="0.94"/>
            <acceptor a_prob="0.993" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="69539" g_stop="69491" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="266" r_length="49" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E288496" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>266</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E288496" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70067" e_stop="70046"/>
          <exon e_start="69913" e_stop="69821"/>
          <exon e_start="69739" e_stop="69638"/>
          <exon e_start="69539" e_stop="69491"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATACTCACGCTAAAGTGAAGGTACATAGCTAATTTGACGAAGTTGTGCACTGATTTTCTCACCAGCATATCTGAAATGTGGAAGTTATCATTTTGTATGTCATATTTAAGTATGTACACATTTTCAATTTGTTTTCCCATATCATTGTACAGGCAATAGAGCTTATGATTGTAGATGCACTAGTGAAAGCAAATGATTATCTACACATATCATCACATATAGAGCATCCTTCTCAATACTGGAAGGTCGGCATGGTCTTTTTGTTAGCTTCAACCTCCTTAATTCATGGAACCATGAAAATAATTTCTCTGTGTATGTGGAAGTAGTTAGATGACACCATTTTAAAAACCATCGAGACTGCTCCAGACCCGGAACTGAAGGAATCTAGGGATTTGATCCTTCGTGTCCGAAGGAGAGATTTGTACCAGGTACTGAGGTTATCTAATGGGTGTTGATTAAGCAGGTTATATGAGTATTATGGGATGTTTGAAGTTTACGGGTTAATTCTTGTTTTTGCACATTGCAGTTCTGTAATGAGTATGCTGTCCCAAGAGACAAAATAGAGCATTTCAAGG</genome_strand>
        <mrna_strand>TTATACTCACGCTAAAGAGAAG....................................................................................................................................GCAATAGAGCTTATGATTGTAGATGCACTAGTGAAAGCAAATGATTATCTACACATATCATCACATATAGAGCATCCTTCTCAATACTGGAAG.................................................................................TAAGATGACACCATTTTAAAAACCATCGAGACTGCTCCAGACCCGGAACTGAAGGAATCTAGGGATTAGATCCTTCGTGTCCGAAGGAGAGAAATGTACCAG..................................................................................................TTCTGAAATGAGTATGCTGTCCCAAGAGACAAAAAAGAGCATGTCAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E548022" ref_strand="+" ref_description="SGN-E548022 [TUS-57-E12]">
      <seq>gaagaacttagtttctcttccaatttcgacttcgcttcctctcaggatctcagattctctaagcaaatccatgacaacgttcacggcaacatctacatcgacccgctctacttgaagttcattgacacagaacaatttcaaaggcttcgtgatcttaaacaactaggtgtgacacacatggtctatccaggagcagtgcattctagatttgagcattcccttggagtgtattggcttgccaatgaagctgtccataagcttaaaacccaccaaggtatggagcttggaattgatcactttgatatacaaacagtgaaacttgcaggtcttctacatgatattggacatggaccttttagccacttgtttgaacgcgagtttcttcctcaagtttgcaatggattggactggtctcatgagcaaatgtctgtggacatgattgatcacattgttgatgagcgtcgtattgatattgattctggaaccattaaaagggtcaaggaaatgatacttgctagttccaagtttacgttgacaaaaagctcaagggagaagcagttcttatatgatattgtggctaatggtcgaaatggagtcgatgttgacaagtttgattacattgtccgagatagccgtgcgtgtgcagtaggatgcaattttcaatttgagaggttgatggaaactatgagagtattgggagatgagatatgttatcgagccaaagattatttaaccatccacaagttatttgccacacgagctgatctacacagaactgtttatactcacgcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75351" stop="69754"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75051" g_stop="74947" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74946" i_stop="73980" i_length="967">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.915" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73979" g_stop="73942" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="143" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73941" i_stop="73708" i_length="234">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.964" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73707" g_stop="73685" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="166" r_length="23" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="73684" i_stop="72820" i_length="865">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="0.908" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="72819" g_stop="72713" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="273" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="72712" i_stop="72627" i_length="86">
            <donor d_prob="0.864" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="72626" g_stop="72575" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="325" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="72574" i_stop="72489" i_length="86">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.938" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="72488" g_stop="72404" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="410" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="72403" i_stop="71711" i_length="693">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="71710" g_stop="71620" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="501" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="71619" i_stop="70821" i_length="799">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="70820" g_stop="70782" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="502" r_stop="540" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="70781" i_stop="70585" i_length="197">
            <donor d_prob="0.822" d_score="0.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="70584" g_stop="70517" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="541" r_stop="608" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="70516" i_stop="70424" i_length="93">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="70423" g_stop="70361" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="609" r_stop="671" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="70360" i_stop="70256" i_length="105">
            <donor d_prob="0.939" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="70255" g_stop="70200" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="672" r_stop="727" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="70199" i_stop="70120" i_length="80">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="70119" g_stop="70054" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="728" r_stop="793" r_length="66" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E548022" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>793</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E548022" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75051" e_stop="74947"/>
          <exon e_start="73979" e_stop="73942"/>
          <exon e_start="73707" e_stop="73685"/>
          <exon e_start="72819" e_stop="72713"/>
          <exon e_start="72626" e_stop="72575"/>
          <exon e_start="72488" e_stop="72404"/>
          <exon e_start="71710" e_stop="71620"/>
          <exon e_start="70820" e_stop="70782"/>
          <exon e_start="70584" e_stop="70517"/>
          <exon e_start="70423" e_stop="70361"/>
          <exon e_start="70255" e_stop="70200"/>
          <exon e_start="70119" e_stop="70054"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAACTTAGTTTCTCTTCCAATTTCGACTTCGCTTCCTCTCAGGATCTCAGATTCTCTAAGCAAATCCATGACAACGTTCACGGCAACATCTACATCGACCCGGTATGTTGCTGTCTCTCACTCTCTGCTGGCTAGTTAACTTTCTACATTTCTGTACATGCTTTGCTTATACCTGCACTGTTTGAATTTATAGGTAGTTAGTTTTTCTTTTGTTTTGGTTCTAAGAGCAATCACAAATGTGTATGCTACACTAGTTTTCTGTGCTATCTAATAGCCAAAAGTGTACTACTATTTTAAAGGAAATTGATAACTGTCAATGAGATAAATGAGAATTCAGAGCTATTTTAAGTTGCACTTCATACATTTTTATTATCCACAGTTTTCTATGGGTAAGTCAGTGCCGAAATTGTACTCGCAAATTAGCCAAAATTGTTAACCGTCAGACTGAATAAATGAGTTCAAAACTATTTTGAATATCAATTCATAAATTTTTGTTATCCACAATTTTCTTAAAATTTTTCAACAAATAAAAAAAAAGTTATCTAGAATGCTTGTGACTTCCAATGTTCAAAGAAAAAAGTTATCTAGAACGCTTGTGCCAAAATTTTGATTTTGTTTCATTTAATGAAACATTAGTGACCATGTGACCATAACAATTAACAAGAGAAGATGATTTTTTCTTCATTCATGATTTATTCGAGAAGCATATAAGGTCAAAATTCATAAGTTTGTTTTGCTGGTAAGAATGGATCGATCTTAAAAGAATGATAGCAACAAAGTGTTTTCCCACACTGTCCTTGGTTAACCTGTGACACAATCCTCTTTCAGCTTTCAGGCTAAAACATGTATTTTATCCAATAGATCAATGAGTTGTTATTCGCCCGTATTTATTTATTAGTATGTGATTGTTTACCAGGCAAGAGAGACACTGGGGTGTGGAGGTTACTGTTTTCTCATTGTGATATCAGATCTACACTCTTATTTTCACTATTCTTATACATTTTCTTTAACTTCTTATTGAGAGCTTTGTGCAAACTACTGGAAGTTTATTCTTTTCTGAACTTTGCAGCTCTACTTGAAGTTCATTGACACAGAACAATTTCAAAGGCAAGTTTCCTTATCATCTACTTCTAGTAGTGTAGTATTAGTGGTAGATCTCAGTTTATTGCATCCCTACTATAAATCTATGTACTTTTCGAGTATATGTTTTCATATTGGCTGCAATTTGCCTATGACCTGATAGTCATCTTTTATTTTCTTTTATTTTCGTTTGTATGTTCAACACTTTATCATGAGAGCTTTACTAGAATTATTGAACTGTTTTTTTCTTTTGTTTTCCAGGCTTCGTGATCTTAAACAACTAGGTAAGTTACTATCCTTGTTCCCTATTTGCATACCTGGTCGCAAGCTTGTTTATGCTAGAACATCAAATTTAGCCTTGTGATTCAAAATGGGATATGAAGAAGTTTTCTTATCTATCATCTACGTGTCCGCTGAAATGTGGCATTTAGTTCTTTCATATTGCAAAATTATTACTAGTAAAATGTGGGATGACATAAAAGATGTAACTAACCTGTATTTTATTTGTCTTAATGTGAGTTGTTTTGGTTATCAAAACTATGATAAAATTGATAACTATCTTTGCCTCTTAAATATGTTCTGACATTATCTGCAACTTTCAGCTTCACTTTGTGATTAGCGGTGACACTTGAACGTATAAATAGTCTGTTTCAACTTCAGTGGTATCTAAATTGTGGTTGCATTGGTGACTGTCGTCGGATCCTTGTAAGGTCTTACGATAATTGCAAAGATATCTTGTTTCTTAGTGTCCTATGAAGACATATCTATATAGGTTATTCAAATTCTGGATATTCGTGTAAATGATGACTTAAGAACTCAAAATTAGCTTTTAAAGCCCTGCATGCATATTTCCCATACAAGCCTCTTGCAGAGGCTGAAGCAAGCCCAAGGTTACAAGCCTAGATGCAAGTTACAAAAAGGCTATATGGTCTCCTATTGCTCAATGGGTAAATTTCACCCTCTCTTAAAATGAGATCCATGTTATCTGTTCAAGAAGTTTAAATCATCCATCTTCCAATCAGTACTTGATGCAGCCACTGGCTCTTACTGTTGTGCTCAATGTTGGTGGAAACATTGTAAGTCTAGGAGTTAACAGCCTGGTAGTGGCTTGAATTTGTTACTAATATGAGCTCTTGTATTCACTTTAAGGTGTGACACACATGGTCTATCCAGGAGCAGTGCATTCTAGATTTGAGCATTCCCTTGGAGTGTATTGGCTTGCCAATGAAGCTGTCCATAAGCTTAAAACCCACCAAGTATTAATTTGTTTATACTATTATTTTGGTTTCTCAACTTGACATACCTGAGGGGTTGTTATGTAATCCTAGTGTTCCTTTTACAGGGTATGGAGCTTGGAATTGATCACTTTGATATACAAACAGTGAAACTTGCAGGTAAGTGATATGGAATGCCTTGTGCATGGATGCTCTTCCTAATGCAGAATAATGAACTTCCATTCCATTGTGGTTGAATTTCTTAGGTCTTCTACATGATATTGGACATGGACCTTTTAGCCACTTGTTTGAACGCGAGTTTCTTCCTCAAGTTTGCAATGGATTGGACTGGTAATACTTTACTGTGGAATGAATTCTGTTATTTGGATACCTCTCAAGATATATGTCACATTCTCATGCTATTCAATTTTTTTTTTTTGAAATAGATGCTATTCAATTTTTTTTTTTTTTTTGAAATAGATGATATTCAATTTTTCTTGGCTAATAAGAGTTGAATTTTTGACATTTCCAATTCCCTGCAACGTACTTGATCTTAGCAAGAATCTTCTACTTTTAGTAAAGGCTTGAAGTGATCAAATAAGGAAGAAATGAATTTTTACTTTTTTAGAGTGGGAATGTTTTCATATTGGATTATTGGCAAGTCTTTAGGAAAGCTCTAGTTTTGCCCTTTTAACTTCAATAAATCAATATATTTCTATCCCAAACTAGTTGGACAGTTTTATCATTTAATCATAGAAAATAAAGTTATGCTTACAGCATACATTATGTGGTAGAAATCCTAAAGTTGTAATTAATCATGGTGGAGGACCTTGGCATATGATGATTTTGTTTAGTTGTTTCCAACTGTTTGTGTCTGCTCTTGCCTGCTGGTTGTAGTGTTGATATTGAGAAAATATTTCCTAGTTAACTATCTTAATGTTTTTGTTGTTCAAGTTTCTTTGAAGCTTCTTGCACTCATAATGAGGTGATGTCATTATTTTAGTATAGTGCATATTAATGACCTTGTCTTATGTTTTATTTTAGGTCTCATGAGCAAATGTCTGTGGACATGATTGATCACATTGTTGATGAGCGTCGTATTGATATTGATTCTGGAACCATTAAAAGGGTCAAGGTAAGATGAATTATTTTGATTTATGCTAGTTGATATCATACGAGATGAGAATGGTAATTTGCTTATAACATGTAGTATTTGTCAGTTTCAAAAAAAAAAAAAAATCCCTCTGTTTCAACTTGATTGTCCTATTTTGTAGAATGTACCAAATTGTCTTTTAAACTTGTGGTCTTAAACATGCTTTGTGAAAATTTATAATTAAAGAGTTGCCATAAAAGGGAAGAGTCATTTTTTTAAAAAATGGACTCAAACGGAAAGTAGGACTAACAAACTGAAATGGAGGGAGTATGAAGTATTTGTGCAAACTTGTATCGTCTCCAGAAGCAATTTGAATTTTAGGTGCTACTCAAGTATGGCAGACACGTGGAACTTTGTCAGCTATTGGCTGAAAGAGAATTTGTATGTGTGGAACTAAAACCTGCAAAGAGATAGCTTCTTTCATTAAATTCTCTTGAGCTACTAGTAAGAAAAAGCTTCTGCTGATTTGCAATGCTCTTCTTTACTATGCTTTTCAATGGTAACTAATGTCAAATTTTAGTGAACGAATTCTTTGACCAAAGTTATGACTATACGTTGGTTGAGATAATAAAGTTATTCACCATTCATGTGAGTTATTATTACTTCATGCAAATTCTATGACCAAGCTATGACTATGTTCGTTGAGATATTCATGTGAGTTACTATTCTTCATACAGCTAAAAGCAAATTGATTGTACATGCCACAAGTCATCATAAGACTTGTTTATATTGTAAGCAGGAAAAATTTTAAACGTGGCCTTTTGACCTCTATATTTGACAGGAAATGATACTTGCTAGTTCCAAGTTTACGTTGACAAAAGTAAGTCCTTCTCTTTCCATTTTCCAGCACATAGTTATCAGGAGGAAAAAAAACGTGATTCTTGCAATTTGACTGTTTTCATTTGACATGCATTTGCACTTCAATCTGGAATTTTTAGCTTTTTCTGCTCATCATTTCACATCATATTCCATTTTTGAAACTTGTGCACTGCTTCAATTTGATTGATTAATATGTAGAGCTCAAGGGAGAAGCAGTTCTTATATGATATTGTGGCTAATGGTCGAAATGGAGTCGATGTTGACAAGTTGGTTTCTAAACTATAGATTATTCTCTTCTCTTTTTTTTCCAACCTATTCTTTTCCAGCTTTCACCGGATGAAGCTTTCTTTGGTTTGCAGGTTTGATTACATTGTCCGAGATAGCCGTGCGTGTGCAGTAGGATGCAATTTTCAATTTGAGAGGTCTTCTCTTTCATCTTTTTGTCTATTGTGAATCGACATCTTTTCACAAATATCGAGAGAAAGGGAAAATAATTCTTTACCGTGAACTGTATTCATTTTCTGTAGGTTGATGGAAACTATGAGAGTATTGGGAGATGAGATATGTTATCGAGCCAAAGATTGTTAGTACTCAACTCTAACCAATATCTTATTTATTTTTGTTTGACTTCTGGTCTTATTATTTGTGTGGATAAATCCTCAGATTTAACCATCCACAAGTTATTTGCCACACGAGCTGATCTACACAGAACTGTTTATACTCACGCTA</genome_strand>
        <mrna_strand>GAAGAACTTAGTTTCTCTTCCAATTTCGACTTCGCTTCCTCTCAGGATCTCAGATTCTCTAAGCAAATCCATGACAACGTTCACGGCAACATCTACATCGACCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTACTTGAAGTTCATTGACACAGAACAATTTCAAAG..........................................................................................................................................................................................................................................GCTTCGTGATCTTAAACAACTAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGACACACATGGTCTATCCAGGAGCAGTGCATTCTAGATTTGAGCATTCCCTTGGAGTGTATTGGCTTGCCAATGAAGCTGTCCATAAGCTTAAAACCCACCAA......................................................................................GGTATGGAGCTTGGAATTGATCACTTTGATATACAAACAGTGAAACTTGCAG......................................................................................GTCTTCTACATGATATTGGACATGGACCTTTTAGCCACTTGTTTGAACGCGAGTTTCTTCCTCAAGTTTGCAATGGATTGGACTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCATGAGCAAATGTCTGTGGACATGATTGATCACATTGTTGATGAGCGTCGTATTGATATTGATTCTGGAACCATTAAAAGGGTCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATGATACTTGCTAGTTCCAAGTTTACGTTGACAAAA.....................................................................................................................................................................................................AGCTCAAGGGAGAAGCAGTTCTTATATGATATTGTGGCTAATGGTCGAAATGGAGTCGATGTTGACAA.............................................................................................GTTTGATTACATTGTCCGAGATAGCCGTGCGTGTGCAGTAGGATGCAATTTTCAATTTGAGAG.........................................................................................................GTTGATGGAAACTATGAGAGTATTGGGAGATGAGATATGTTATCGAGCCAAAGATT................................................................................ATTTAACCATCCACAAGTTATTTGCCACACGAGCTGATCTACACAGAACTGTTTATACTCACGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E332503" ref_strand="+" ref_description="SGN-E332503 [cTOD-17-L20]">
      <seq>ggcctgtgtcgcttgctgctgcagcaatagaacagaaattaaaaaaacgagacatttgataatagtaattgaaataaagagactttgacggcactactatatcactactcacattctccttcccattttcgtgcaaatcaaatatattcttcctcctactctacgccagctgctctcctctctctttctctctcctttcggcacctcaaaagagtggtgaagtagagagcccaagggtgagtatgggagctttttcaaatgaagaacttagtttctcttccaatttcgacttcgcttcctctcaggatctcagattctctaagcaaatccatgacaacgttcacggcaacatctacatcgacccgctctacttgaagttcattgacacagaacaatttcaaaggcttcgtgatcttaaacaactaggtgtgacacacatggtctatccaggagcagtgcattctagatttgagcattcccttggagtgtattggcttgccaatgaagctgtccataagcttaaaacccaccaaggtatggagcttggaattgatcactttgatatacaaacagtgaaacttgcaggtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75702" stop="72360"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75402" g_stop="75191" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="212" r_length="212" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75190" i_stop="75100" i_length="91">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75099" g_stop="74947" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="213" r_stop="365" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74946" i_stop="73980" i_length="967">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.915" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73979" g_stop="73942" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="403" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="73941" i_stop="73708" i_length="234">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.964" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73707" g_stop="73685" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="426" r_length="23" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="73684" i_stop="72820" i_length="865">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="0.908" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="72819" g_stop="72713" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="533" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="72712" i_stop="72627" i_length="86">
            <donor d_prob="0.864" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="72626" g_stop="72575" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="534" r_stop="585" r_length="52" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E332503" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E332503" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75402" e_stop="75191"/>
          <exon e_start="75099" e_stop="74947"/>
          <exon e_start="73979" e_stop="73942"/>
          <exon e_start="73707" e_stop="73685"/>
          <exon e_start="72819" e_stop="72713"/>
          <exon e_start="72626" e_stop="72575"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCCTGTGTCGCTTGCTGCTGCAGCAATAGAACAGAAATTAAAAAAACGAGACATTTGATAATAGTAATTGAAATAAAGAGACTTTGACGGCACTACTATATCACTACTCACATTCTCCTTCCCATTTTCGTGCAAATCAAATATATTCTTCCTCCTACTCTACGCCAGCTGCTCTCCTCTCTCTTTCTCTCTCCTTTCGGCACCTCAAAAGGTATGTAAACGCGTACGCAATTACTCAACCGTTACCAATATTAGGTTTATTCATTTTGCAATTTTTCTGTTGTTTTCTCTGTGCTGTGTAGAGTGGTGAAGTAGAGAGCCCAAGGGTGAGTATGGGAGCTTTTTCAAATGAAGAACTTAGTTTCTCTTCCAATTTCGACTTCGCTTCCTCTCAGGATCTCAGATTCTCTAAGCAAATCCATGACAACGTTCACGGCAACATCTACATCGACCCGGTATGTTGCTGTCTCTCACTCTCTGCTGGCTAGTTAACTTTCTACATTTCTGTACATGCTTTGCTTATACCTGCACTGTTTGAATTTATAGGTAGTTAGTTTTTCTTTTGTTTTGGTTCTAAGAGCAATCACAAATGTGTATGCTACACTAGTTTTCTGTGCTATCTAATAGCCAAAAGTGTACTACTATTTTAAAGGAAATTGATAACTGTCAATGAGATAAATGAGAATTCAGAGCTATTTTAAGTTGCACTTCATACATTTTTATTATCCACAGTTTTCTATGGGTAAGTCAGTGCCGAAATTGTACTCGCAAATTAGCCAAAATTGTTAACCGTCAGACTGAATAAATGAGTTCAAAACTATTTTGAATATCAATTCATAAATTTTTGTTATCCACAATTTTCTTAAAATTTTTCAACAAATAAAAAAAAAGTTATCTAGAATGCTTGTGACTTCCAATGTTCAAAGAAAAAAGTTATCTAGAACGCTTGTGCCAAAATTTTGATTTTGTTTCATTTAATGAAACATTAGTGACCATGTGACCATAACAATTAACAAGAGAAGATGATTTTTTCTTCATTCATGATTTATTCGAGAAGCATATAAGGTCAAAATTCATAAGTTTGTTTTGCTGGTAAGAATGGATCGATCTTAAAAGAATGATAGCAACAAAGTGTTTTCCCACACTGTCCTTGGTTAACCTGTGACACAATCCTCTTTCAGCTTTCAGGCTAAAACATGTATTTTATCCAATAGATCAATGAGTTGTTATTCGCCCGTATTTATTTATTAGTATGTGATTGTTTACCAGGCAAGAGAGACACTGGGGTGTGGAGGTTACTGTTTTCTCATTGTGATATCAGATCTACACTCTTATTTTCACTATTCTTATACATTTTCTTTAACTTCTTATTGAGAGCTTTGTGCAAACTACTGGAAGTTTATTCTTTTCTGAACTTTGCAGCTCTACTTGAAGTTCATTGACACAGAACAATTTCAAAGGCAAGTTTCCTTATCATCTACTTCTAGTAGTGTAGTATTAGTGGTAGATCTCAGTTTATTGCATCCCTACTATAAATCTATGTACTTTTCGAGTATATGTTTTCATATTGGCTGCAATTTGCCTATGACCTGATAGTCATCTTTTATTTTCTTTTATTTTCGTTTGTATGTTCAACACTTTATCATGAGAGCTTTACTAGAATTATTGAACTGTTTTTTTCTTTTGTTTTCCAGGCTTCGTGATCTTAAACAACTAGGTAAGTTACTATCCTTGTTCCCTATTTGCATACCTGGTCGCAAGCTTGTTTATGCTAGAACATCAAATTTAGCCTTGTGATTCAAAATGGGATATGAAGAAGTTTTCTTATCTATCATCTACGTGTCCGCTGAAATGTGGCATTTAGTTCTTTCATATTGCAAAATTATTACTAGTAAAATGTGGGATGACATAAAAGATGTAACTAACCTGTATTTTATTTGTCTTAATGTGAGTTGTTTTGGTTATCAAAACTATGATAAAATTGATAACTATCTTTGCCTCTTAAATATGTTCTGACATTATCTGCAACTTTCAGCTTCACTTTGTGATTAGCGGTGACACTTGAACGTATAAATAGTCTGTTTCAACTTCAGTGGTATCTAAATTGTGGTTGCATTGGTGACTGTCGTCGGATCCTTGTAAGGTCTTACGATAATTGCAAAGATATCTTGTTTCTTAGTGTCCTATGAAGACATATCTATATAGGTTATTCAAATTCTGGATATTCGTGTAAATGATGACTTAAGAACTCAAAATTAGCTTTTAAAGCCCTGCATGCATATTTCCCATACAAGCCTCTTGCAGAGGCTGAAGCAAGCCCAAGGTTACAAGCCTAGATGCAAGTTACAAAAAGGCTATATGGTCTCCTATTGCTCAATGGGTAAATTTCACCCTCTCTTAAAATGAGATCCATGTTATCTGTTCAAGAAGTTTAAATCATCCATCTTCCAATCAGTACTTGATGCAGCCACTGGCTCTTACTGTTGTGCTCAATGTTGGTGGAAACATTGTAAGTCTAGGAGTTAACAGCCTGGTAGTGGCTTGAATTTGTTACTAATATGAGCTCTTGTATTCACTTTAAGGTGTGACACACATGGTCTATCCAGGAGCAGTGCATTCTAGATTTGAGCATTCCCTTGGAGTGTATTGGCTTGCCAATGAAGCTGTCCATAAGCTTAAAACCCACCAAGTATTAATTTGTTTATACTATTATTTTGGTTTCTCAACTTGACATACCTGAGGGGTTGTTATGTAATCCTAGTGTTCCTTTTACAGGGTATGGAGCTTGGAATTGATCACTTTGATATACAAACAGTGAAACTTGCAG</genome_strand>
        <mrna_strand>GGCCTGTGTCGCTTGCTGCTGCAGCAATAGAACAGAAATTAAAAAAACGAGACATTTGATAATAGTAATTGAAATAAAGAGACTTTGACGGCACTACTATATCACTACTCACATTCTCCTTCCCATTTTCGTGCAAATCAAATATATTCTTCCTCCTACTCTACGCCAGCTGCTCTCCTCTCTCTTTCTCTCTCCTTTCGGCACCTCAAAAG...........................................................................................AGTGGTGAAGTAGAGAGCCCAAGGGTGAGTATGGGAGCTTTTTCAAATGAAGAACTTAGTTTCTCTTCCAATTTCGACTTCGCTTCCTCTCAGGATCTCAGATTCTCTAAGCAAATCCATGACAACGTTCACGGCAACATCTACATCGACCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTACTTGAAGTTCATTGACACAGAACAATTTCAAAG..........................................................................................................................................................................................................................................GCTTCGTGATCTTAAACAACTAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGACACACATGGTCTATCCAGGAGCAGTGCATTCTAGATTTGAGCATTCCCTTGGAGTGTATTGGCTTGCCAATGAAGCTGTCCATAAGCTTAAAACCCACCAA......................................................................................GGTATGGAGCTTGGAATTGATCACTTTGATATACAAACAGTGAAACTTGCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E338725" ref_strand="+" ref_description="SGN-E338725 [cTOE-21-M13]">
      <seq>tctttctctctcctttcggcacctcaaaagagtggtgaagtagagagcccaagggtgagtatgggagctttttcaaatgaagaacttagtttctcttccaatttcgacttcgcttcctctcaggatctcagattctctaagcaaatccatgacaacgttcacggcaacatctacatcgacccgctctacttgaagttcattgacacagaacaatttcaaaggcttcgtgatcttaaacaactaggtgtgacacacatggtctatccaggagcagtgcattctagatttgagcattccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75520" stop="72465"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75220" g_stop="75191" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75190" i_stop="75100" i_length="91">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75099" g_stop="74947" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="183" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74946" i_stop="73980" i_length="967">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.915" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73979" g_stop="73942" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="221" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="73941" i_stop="73708" i_length="234">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.964" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73707" g_stop="73685" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="244" r_length="23" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="73684" i_stop="72820" i_length="865">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="0.908" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="72819" g_stop="72765" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="299" r_length="55" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E338725" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>299</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E338725" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75220" e_stop="75191"/>
          <exon e_start="75099" e_stop="74947"/>
          <exon e_start="73979" e_stop="73942"/>
          <exon e_start="73707" e_stop="73685"/>
          <exon e_start="72819" e_stop="72765"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTCTCTCTCCTTTCGGCACCTCAAAAGGTATGTAAACGCGTACGCAATTACTCAACCGTTACCAATATTAGGTTTATTCATTTTGCAATTTTTCTGTTGTTTTCTCTGTGCTGTGTAGAGTGGTGAAGTAGAGAGCCCAAGGGTGAGTATGGGAGCTTTTTCAAATGAAGAACTTAGTTTCTCTTCCAATTTCGACTTCGCTTCCTCTCAGGATCTCAGATTCTCTAAGCAAATCCATGACAACGTTCACGGCAACATCTACATCGACCCGGTATGTTGCTGTCTCTCACTCTCTGCTGGCTAGTTAACTTTCTACATTTCTGTACATGCTTTGCTTATACCTGCACTGTTTGAATTTATAGGTAGTTAGTTTTTCTTTTGTTTTGGTTCTAAGAGCAATCACAAATGTGTATGCTACACTAGTTTTCTGTGCTATCTAATAGCCAAAAGTGTACTACTATTTTAAAGGAAATTGATAACTGTCAATGAGATAAATGAGAATTCAGAGCTATTTTAAGTTGCACTTCATACATTTTTATTATCCACAGTTTTCTATGGGTAAGTCAGTGCCGAAATTGTACTCGCAAATTAGCCAAAATTGTTAACCGTCAGACTGAATAAATGAGTTCAAAACTATTTTGAATATCAATTCATAAATTTTTGTTATCCACAATTTTCTTAAAATTTTTCAACAAATAAAAAAAAAGTTATCTAGAATGCTTGTGACTTCCAATGTTCAAAGAAAAAAGTTATCTAGAACGCTTGTGCCAAAATTTTGATTTTGTTTCATTTAATGAAACATTAGTGACCATGTGACCATAACAATTAACAAGAGAAGATGATTTTTTCTTCATTCATGATTTATTCGAGAAGCATATAAGGTCAAAATTCATAAGTTTGTTTTGCTGGTAAGAATGGATCGATCTTAAAAGAATGATAGCAACAAAGTGTTTTCCCACACTGTCCTTGGTTAACCTGTGACACAATCCTCTTTCAGCTTTCAGGCTAAAACATGTATTTTATCCAATAGATCAATGAGTTGTTATTCGCCCGTATTTATTTATTAGTATGTGATTGTTTACCAGGCAAGAGAGACACTGGGGTGTGGAGGTTACTGTTTTCTCATTGTGATATCAGATCTACACTCTTATTTTCACTATTCTTATACATTTTCTTTAACTTCTTATTGAGAGCTTTGTGCAAACTACTGGAAGTTTATTCTTTTCTGAACTTTGCAGCTCTACTTGAAGTTCATTGACACAGAACAATTTCAAAGGCAAGTTTCCTTATCATCTACTTCTAGTAGTGTAGTATTAGTGGTAGATCTCAGTTTATTGCATCCCTACTATAAATCTATGTACTTTTCGAGTATATGTTTTCATATTGGCTGCAATTTGCCTATGACCTGATAGTCATCTTTTATTTTCTTTTATTTTCGTTTGTATGTTCAACACTTTATCATGAGAGCTTTACTAGAATTATTGAACTGTTTTTTTCTTTTGTTTTCCAGGCTTCGTGATCTTAAACAACTAGGTAAGTTACTATCCTTGTTCCCTATTTGCATACCTGGTCGCAAGCTTGTTTATGCTAGAACATCAAATTTAGCCTTGTGATTCAAAATGGGATATGAAGAAGTTTTCTTATCTATCATCTACGTGTCCGCTGAAATGTGGCATTTAGTTCTTTCATATTGCAAAATTATTACTAGTAAAATGTGGGATGACATAAAAGATGTAACTAACCTGTATTTTATTTGTCTTAATGTGAGTTGTTTTGGTTATCAAAACTATGATAAAATTGATAACTATCTTTGCCTCTTAAATATGTTCTGACATTATCTGCAACTTTCAGCTTCACTTTGTGATTAGCGGTGACACTTGAACGTATAAATAGTCTGTTTCAACTTCAGTGGTATCTAAATTGTGGTTGCATTGGTGACTGTCGTCGGATCCTTGTAAGGTCTTACGATAATTGCAAAGATATCTTGTTTCTTAGTGTCCTATGAAGACATATCTATATAGGTTATTCAAATTCTGGATATTCGTGTAAATGATGACTTAAGAACTCAAAATTAGCTTTTAAAGCCCTGCATGCATATTTCCCATACAAGCCTCTTGCAGAGGCTGAAGCAAGCCCAAGGTTACAAGCCTAGATGCAAGTTACAAAAAGGCTATATGGTCTCCTATTGCTCAATGGGTAAATTTCACCCTCTCTTAAAATGAGATCCATGTTATCTGTTCAAGAAGTTTAAATCATCCATCTTCCAATCAGTACTTGATGCAGCCACTGGCTCTTACTGTTGTGCTCAATGTTGGTGGAAACATTGTAAGTCTAGGAGTTAACAGCCTGGTAGTGGCTTGAATTTGTTACTAATATGAGCTCTTGTATTCACTTTAAGGTGTGACACACATGGTCTATCCAGGAGCAGTGCATTCTAGATTTGAGCATTCCCT</genome_strand>
        <mrna_strand>TCTTTCTCTCTCCTTTCGGCACCTCAAAAG...........................................................................................AGTGGTGAAGTAGAGAGCCCAAGGGTGAGTATGGGAGCTTTTTCAAATGAAGAACTTAGTTTCTCTTCCAATTTCGACTTCGCTTCCTCTCAGGATCTCAGATTCTCTAAGCAAATCCATGACAACGTTCACGGCAACATCTACATCGACCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTACTTGAAGTTCATTGACACAGAACAATTTCAAAG..........................................................................................................................................................................................................................................GCTTCGTGATCTTAAACAACTAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGACACACATGGTCTATCCAGGAGCAGTGCATTCTAGATTTGAGCATTCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E278518" ref_strand="+" ref_description="SGN-E278518 [cLEL-2-P15](-)">
      <seq>aaaaacaggcagtgaaccgatgaccttattagcaaaactagaaattggatttgtggtctcatccatataagccttgacgagcaagaccgcaccgccattggagttggaattatttcttctggatggaaatgtatagaaacgtcgaaagtaacgaagagagggagagattgagttacagtagatggaggaggaagaagaaggagagtggagagaggagacaaccaccatagtgttacatgtggtggacgttcaatctttgttttgatatttgctcgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="76619" stop="75744"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76319" g_stop="76042" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="278" r_length="278" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E278518" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>278</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E278518" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76319" e_stop="76042"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACAGGCAGTGAACCGATGACCTTATTAGCAAAACTAGAAATTGGATTTGTGGTCTCATCCATATAAGCCTTGACGAGCAAGACCGCACCGCCATTGGAGTTGGAATTATTTCTTCTGGATGGAAATGTATAGAAACGTCGAAAGTAACGAAGAGAGGGAGAGATTGAGTTACAGTAGATGGAGGAGGAAGAAGAAGGAGAGTGGAGAGAGGAGACAACCACCATAGTGTTACATGTGGTGGACGTTCAATCTTTGTTTTGATATTTGCCCCTTT</genome_strand>
        <mrna_strand>AAAAACAGGCAGTGAACCGATGACCTTATTAGCAAAACTAGAAATTGGATTTGTGGTCTCATCCATATAAGCCTTGACGAGCAAGACCGCACCGCCATTGGAGTTGGAATTATTTCTTCTGGATGGAAATGTATAGAAACGTCGAAAGTAACGAAGAGAGGGAGAGATTGAGTTACAGTAGATGGAGGAGGAAGAAGAAGGAGAGTGGAGAGAGGAGACAACCACCATAGTGTTACATGTGGTGGACGTTCAATCTTTGTTTTGATATTTGCTCGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E265567" ref_strand="+" ref_description="SGN-E265567 [cLEI-14-D12]">
      <seq>aaatatcaaaacaaagattgaacgtccaccacatgtaacactatggtggttgtctcctctctccactctccttcttcttcctcctccatctactgtaactcaatctctccctctcttcgttactttcgacgtttctatacatttccatccagaagaaataattccaactccaatggcggtgcggtcttgctcgtcaaggcttatatggatgagaccacaaatccaatttctagttttgctaataaggtcatcggttcactgcctgtttttggtctcatagccagaattgtcaatgaggaaggtggtgttggaggcgattttattgattttgcggagttcaggaggcgagtcggtaacaagtgttccattaatgattcaagagctttttatgaatttcgagatcgacgtggcaagacaggggatcctctgtatgtgctactgtgttgttggttagctgcagtaagagctggtttactcaaatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75750" stop="76909"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76050" g_stop="76463" g_length="414"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="414" r_length="414" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76541" g_stop="76609" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="483" r_length="69" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E265567" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>483</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E265567" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76050" e_stop="76463"/>
          <exon e_start="76541" e_stop="76609"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATATCAAAACAAAGATTGAACGTCCACCACATGTAACACTATGGTGGTTGTCTCCTCTCTCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCT</genome_strand>
        <mrna_strand>AAATATCAAAACAAAGATTGAACGTCCACCACATGTAACACTATGGTGGTTGTCTCCTCTCTCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG.............................................................................ACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAAGAGCTGGTTTACTCAAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E278134" ref_strand="+" ref_description="SGN-E278134 [cLER-4-N15]">
      <seq>taacactatgggggttgactcctctctccactctccttcttcttcctcctccatctactgtaactcaatctctccctctcttcgttactttcgacgtttctatacatttccatccagaagaaataattccaactccaatggcggtgcggtcttgctcgtcaaggcttatatggatgagaccacaaatccaatttctagttttgctaataaggtcatcggttcactgcctgtttttggtctcatagccagaattgtcaatgaggaaggtggtgttggaggcgattttattgattttgcggagttcaggaggcgagtcggtaacaagtgttccattaatgattcaagagctttttatgaatttcgagatcgacgtggcaagacaggggatcctctgtatgtgctactgtgttgttggttagctgcagtaggagctggtttactcaaatctgaggaaattttggaaggggtagcaaggcttagtttagcaaatgatattgaatttgaagaacaaaacttcatcgcaatgatgaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75785" stop="76995"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76085" g_stop="76463" g_length="379"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="379" r_length="379" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76541" g_stop="76695" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="380" r_stop="534" r_length="155" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E278134" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E278134" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76085" e_stop="76463"/>
          <exon e_start="76541" e_stop="76695"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAACACTATGGTGGTTGTCTCCTCTCTCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGA</genome_strand>
        <mrna_strand>TAACACTATGGGGGTTGACTCCTCTCTCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG.............................................................................ACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E292656" ref_strand="+" ref_description="SGN-E292656 [cLET-11-C22]">
      <seq>aacactatggtggttgtctcctctctccactctccttcttcttcctcctccatctactgtaactcaatctctccctctcttcgttactttcgacgtttctatacatttccatccagaagaaataattccaactccaatggcggtgcggtcttgctcgtcaaggcttatatggatgagaccacaaatccaatttctagttttgctaataaggtcatcggttcactgcctgtttttggtctcatagccagaattgtcaatgaagaaggtggtgttggaggcgattttattgattttgcggagttcaagaggcgagtcggtaacaagtgttccattaatgattcaagagctttttatgaatttcgagatcgacgtggcaagacagggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75786" stop="76763"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76086" g_stop="76463" g_length="378"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="378" r_length="378" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76541" g_stop="76547" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="385" r_length="7" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E292656" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>385</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E292656" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76086" e_stop="76463"/>
          <exon e_start="76541" e_stop="76547"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACTATGGTGGTTGTCTCCTCTCTCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGG</genome_strand>
        <mrna_strand>AACACTATGGTGGTTGTCTCCTCTCTCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAAGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAAGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG.............................................................................ACAGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E323187" ref_strand="+" ref_description="SGN-E323187 [cTOB-28-E21]">
      <seq>acactatggtggttgtctcctctctccactctccttcttcttcctcctccatctactgtaactcaatctctccctctcttcgttactttcgacgtttctatacatttccatccagaagaaataattccaactccaatggcggtgcggtcttgctcgtcaaggcttatatggatgagaccacaaatccaatttctagttttgctaataaggtcatcggttcactgcctgtttttggtctcatagccagaattgtcaatgaggaaggtggtgttggaggcgattttattgattttgcggagttcaggaggcgagtcggtaacaagtgttccattaatgattcaagagctttttatgaatttcgagatcgacgtggcaagacaggggatcctctgtatgtgctactgtgttgttggttagctgcagtaggagctggtttactcaaatctgaggaaattttggaaggggtagcaaggcttagtttagcaaatgatattgaatttgaagaacaaaacttcatcgcaatgatgaatgaagcaagggagaagcgatcaaagttgggagctccagcacctacaatccccatggaatttcgtgctgagaaagctcttggagctatacatgtgtgttgctatggaagggatctgattgatgaagagatgaaaactgctaagtacatgcttaatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75787" stop="77625"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76087" g_stop="76463" g_length="377"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="377" r_length="377" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76541" g_stop="76705" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="542" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76706" i_stop="77178" i_length="473">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="77179" g_stop="77325" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="543" r_stop="686" r_length="144" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E323187" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>689</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E323187" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76087" e_stop="76463"/>
          <exon e_start="76541" e_stop="76705"/>
          <exon e_start="77179" e_stop="77325"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACACTATGGTGGTTGTCTCCTCTCTCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAGGTTCGTAAGATTTCATTTGCCAACGATTTTTAGCTTCTTTTCATTTATGTTACCTTACTTTCAATGCTTATCAGTAAATTTATAGCATACTTACTCGGATACTGTCTTTGAGGCATACTTCAACTTCTGTTTATGCTTCATTCTTTTGATGTGGTACTTAGAACTCTGCCTCCATGTTGTTCGAATCCTCCAAAACTGCATATATTTTAGAGTATCGACACATGCAGACAGTATTCTTGGACGATTCAAGCAGCATAGCTCTGCCTAACTCTTATTGGGAAGCTTGCTTACAATAGTATATCGAGTAAATTTATGTTTGCAGCTATCCCATTACGGGCTTCATTAGATTTAGCACCAAGCACAGAATGTGCACGGTTTGATAGCCATATATCACACTTATATTTGAACTCTCGTTTATGGTCCAGTGTTATACCCAGTACCATTTTTGCTAACATTTTCCTTTACTCGTGCAGAAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTACCATGCTTAATGCT</genome_strand>
        <mrna_strand>ACACTATGGTGGTTGTCTCCTCTCTCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG.............................................................................ACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGGAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAG-AGATG-AAAACTGCTAAGTA-CATGCTTAATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E326835" ref_strand="+" ref_description="SGN-E326835 [cTOC-25-I21]">
      <seq>cactatggtggttgtctcctctctccactctccttcttcttcctcctccatctactgtaactcaatctctccctctcttcgttactttcgacgtttctatacatttccatccagaagaaataattccaactccaatggcggtgcggtcttgctcgtcaaggcttatatggatgagaccacaaatccaatttctagttttgctaataaggtcatcggttcactgcctgtttttggtctcatagccagaattgtcaatgaggaaggtggtgttggaggcgattttattgattttgcggagttcaggaggcgagtcggtaacaagtgttccattaatgattcaagagctttttatgaatttcgagatcgacgtggcaagacaggggatcctctgtatgtgctactgtgttgttggttagctgcagtaggagctggtttactcaaatctgaggaaattttggaaggggtagcaaggcttagtttagcaaatgatattgaatttgaagaacaaaacttcatcgcaatgatgaatgaagcaagggagaagcgatcaaagttgggagctccagcacctacaatccccatggaatttcgtgctgagaaagctcttgaagctatacatgtgtgttgctatggaagggatctgattgatgaagaagatgaaaaactgctaagtacatgcttaatgctgtctttcctacagtcgggcggcaaaaggtagaaatcattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75788" stop="77665"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76088" g_stop="76463" g_length="376"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="376" r_length="376" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76541" g_stop="76705" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="541" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76706" i_stop="77178" i_length="473">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="77179" g_stop="77365" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="542" r_stop="727" r_length="186" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E326835" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>728</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E326835" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76088" e_stop="76463"/>
          <exon e_start="76541" e_stop="76705"/>
          <exon e_start="77179" e_stop="77365"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTATGGTGGTTGTCTCCTCTCTCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAGGTTCGTAAGATTTCATTTGCCAACGATTTTTAGCTTCTTTTCATTTATGTTACCTTACTTTCAATGCTTATCAGTAAATTTATAGCATACTTACTCGGATACTGTCTTTGAGGCATACTTCAACTTCTGTTTATGCTTCATTCTTTTGATGTGGTACTTAGAACTCTGCCTCCATGTTGTTCGAATCCTCCAAAACTGCATATATTTTAGAGTATCGACACATGCAGACAGTATTCTTGGACGATTCAAGCAGCATAGCTCTGCCTAACTCTTATTGGGAAGCTTGCTTACAATAGTATATCGAGTAAATTTATGTTTGCAGCTATCCCATTACGGGCTTCATTAGATTTAGCACCAAGCACAGAATGTGCACGGTTTGATAGCCATATATCACACTTATATTTGAACTCTCGTTTATGGTCCAGTGTTATACCCAGTACCATTTTTGCTAACATTTTCCTTTACTCGTGCAGAAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTACCATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGCAAAAGGTAGAAATCATTG</genome_strand>
        <mrna_strand>CACTATGGTGGTTGTCTCCTCTCTCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG.............................................................................ACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTA-CATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGCAAAAGGTAGAAATCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E344756" ref_strand="+" ref_description="SGN-E344756 [cTOF-21-J13]">
      <seq>gtggttgtctcctctctccactctccttcttcttcctcctccatctactgtaactcaatctctccctctcttcgttactttcgacgtttctatacatttccatccagaagaaataattccaactccaatggcggtgcggtcttgctcgtcaaggcttatatggatgagaccacaaatccaatttctagttttgctaataaggtcatcggttcactgcctgtttttggtctcatagccagaattgtcaatgaggaaggtggtgttggaggcgattttattgattttgcggagttcaggaggcgagtcggtaacaagtgttccattaatgattcaagagctttttatgaatttcgagatcgacgtggcaagacaggggatcctctgtatgtgctactgtgttgttggttagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75795" stop="76882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76095" g_stop="76463" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="369" r_length="369" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76541" g_stop="76582" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="370" r_stop="411" r_length="42" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E344756" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>411</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E344756" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76095" e_stop="76463"/>
          <exon e_start="76541" e_stop="76582"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGTTGTCTCCTCTCTCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCT</genome_strand>
        <mrna_strand>GTGGTTGTCTCCTCTCTCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG.............................................................................ACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E278752" ref_strand="+" ref_description="SGN-E278752 [cLER-2-E22]">
      <seq>ggttgtctcctctctccactctccttcttcttcctcctccatctactgtaactcaatctctccctctcttcgttactttcgacgtttctatacatttccatccagaagaaataattccaactccaatggcggtgcggtcttgctcgtcaaggcttatatggatgagaccacaaatccaatttctagttttgctaataaggtcatcggttcactgcctgtttttggtctcatagccagaattgtcaatgaggaaggtggtgttggaggcgattttattgattttgcggagttcaggaggcgagtcggtaacaagtgttccattaatgattcaagagctttttatgaatttcgagatcgacgtggcaagacaggggatcctctgtatgtgctactgtgttgttggttagctgcagtaggagctggtttactcaaatctgaggaaattttggaaggggtagcaaggcttagtttagcaaatgatattgaatttgaagaacaaaacttcatcgcaatgatgaatgaagcaagggagaagcgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75797" stop="77005"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76097" g_stop="76463" g_length="367"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="367" r_length="367" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76541" g_stop="76705" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="532" r_length="165" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E278752" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E278752" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76097" e_stop="76463"/>
          <exon e_start="76541" e_stop="76705"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTGTCTCCTCTCTCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAG</genome_strand>
        <mrna_strand>GGTTGTCTCCTCTCTCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG.............................................................................ACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E205441" ref_strand="+" ref_description="SGN-E205441 [cLEC-28-B20]">
      <seq>tgtctcctctctccactctccttgttcttcctcctccatgtactgtaactcaatctctccctctcttcgttactttcgacgtttctatacatttccatccagaagaaataattccaactccaatggcggtgcggtcttgctcgtcaaggcttatatggatgagaccacaaatccaatttctagttttgctaataaggtcatcggttcactgcctgtttttggtctcatagccagaattgtcaatgaggaaggtggtgttggaggcgattttattgattttgcggagttcatgaggcgagtcggtaacaagtgttccattaatgattcaagagctttttatgaatttcgagatcgacgtggcaagacaggggatcctctgtctgcgctactgtgttgttggttagctgcagtaggagctggtttactcaaatctgaggaaattntggaaggggtagcaaggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75800" stop="76937"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76100" g_stop="76463" g_length="364"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="364" r_length="364" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76541" g_stop="76637" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="461" r_length="97" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E205441" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E205441" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76100" e_stop="76463"/>
          <exon e_start="76541" e_stop="76637"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCTCCTCTCTCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGC</genome_strand>
        <mrna_strand>TGTCTCCTCTCTCCACTCTCCTTGTTCTTCCTCCTCCATGTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCATGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG.............................................................................ACAGGGGATCCTCTGTCTGCGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTNTGGAAGGGGTAGCAAGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E345335" ref_strand="+" ref_description="SGN-E345335 [cTOF-13-C13]">
      <seq>tctcctctctccactctccttcttcttcctcctccatctactgtaactcaatctctccctctcttcgttactttcgacgtttctatacatttccatccagaagaaataattccaactccaatggcggtgcggtcttgctcgtcaaggcttatatggatgagaccacaaatccaatttctagttttgctaataaggtcatcggttcactgcctgtttttggtctcatagccagaattgtcaatgaggaaggtggtgttggaggcgattttattgattttgcggagttcaggaggcgagtcggtaacaagtgttccattaatgattcaagagctttttatgaatttcgagatcgacgtggcaagacaggggatcctctgtatgtgctactgtgttgttggttagctgcagtaggagctggtttactcaaatctgaggaaattttggaaggggtagcaaggcttagtttagcaaatgatattgaatttgaagaacaaaacttcatcgcaatgatgaatgaagcaagggagaagcgatcaaagttgggagctccagcacctacaatccccatggaatttcgtgctgagaaagctcttgaagctatacatgtgtgttgctatggaagggatctgattgatgaagaagatgaaaaactgctaagtaccatgcttaatgctgtctttcctacagtcgggcggcaaaaggtagaaatcattgtca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75802" stop="77668"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76102" g_stop="76463" g_length="362"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="362" r_length="362" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76541" g_stop="76705" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="527" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76706" i_stop="77178" i_length="473">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="77179" g_stop="77368" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="528" r_stop="717" r_length="190" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E345335" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>717</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E345335" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76102" e_stop="76463"/>
          <exon e_start="76541" e_stop="76705"/>
          <exon e_start="77179" e_stop="77368"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCCTCTCTCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAGGTTCGTAAGATTTCATTTGCCAACGATTTTTAGCTTCTTTTCATTTATGTTACCTTACTTTCAATGCTTATCAGTAAATTTATAGCATACTTACTCGGATACTGTCTTTGAGGCATACTTCAACTTCTGTTTATGCTTCATTCTTTTGATGTGGTACTTAGAACTCTGCCTCCATGTTGTTCGAATCCTCCAAAACTGCATATATTTTAGAGTATCGACACATGCAGACAGTATTCTTGGACGATTCAAGCAGCATAGCTCTGCCTAACTCTTATTGGGAAGCTTGCTTACAATAGTATATCGAGTAAATTTATGTTTGCAGCTATCCCATTACGGGCTTCATTAGATTTAGCACCAAGCACAGAATGTGCACGGTTTGATAGCCATATATCACACTTATATTTGAACTCTCGTTTATGGTCCAGTGTTATACCCAGTACCATTTTTGCTAACATTTTCCTTTACTCGTGCAGAAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTACCATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGCAAAAGGTAGAAATCATTGTCA</genome_strand>
        <mrna_strand>TCTCCTCTCTCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG.............................................................................ACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTACCATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGCAAAAGGTAGAAATCATTGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E206443" ref_strand="+" ref_description="SGN-E206443 [cLEC-23-M5]">
      <seq>tccactctccttcttcttcctcctccatctactgtaactcaatctctccctctcttcgttactttcgacgtttctatacatttccatccagaagaaataattccaactccaatggcggtgcggtcttgctcgtcaaggcttatatggatgagaccacaaatccaatttctagttttgctaataaggtcatcggttcactgcctgtttttggtctcatagccagaattgtcaatgaggaaggtggtgttggaggcgattttattgattttgcggagttcaggaggcgagtcggtaacaagtgttccattaatgattcaagagctttttatgaatttcgagatcgacgtggcaagacaggggatcctctgtatgtgctactgtgttgttggttagctgcagtaggagctggtttactcaaatctgaggaaattttggaaggggtagcaaggcttttagcaaatgatattgaatttgaagaacaaaacttcatcgcaatgatgaatgaagcaagggagaagcgatcaaagttgggagctccagcacctacaatccccatggaatttcgtgctgagaaagctcttgaagctatacatgtgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75811" stop="77561"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76111" g_stop="76463" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="353" r_length="353" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76541" g_stop="76705" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="515" r_length="162" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76706" i_stop="77178" i_length="473">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="77179" g_stop="77261" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="516" r_stop="598" r_length="83" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E206443" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E206443" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76111" e_stop="76463"/>
          <exon e_start="76541" e_stop="76705"/>
          <exon e_start="77179" e_stop="77261"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAGGTTCGTAAGATTTCATTTGCCAACGATTTTTAGCTTCTTTTCATTTATGTTACCTTACTTTCAATGCTTATCAGTAAATTTATAGCATACTTACTCGGATACTGTCTTTGAGGCATACTTCAACTTCTGTTTATGCTTCATTCTTTTGATGTGGTACTTAGAACTCTGCCTCCATGTTGTTCGAATCCTCCAAAACTGCATATATTTTAGAGTATCGACACATGCAGACAGTATTCTTGGACGATTCAAGCAGCATAGCTCTGCCTAACTCTTATTGGGAAGCTTGCTTACAATAGTATATCGAGTAAATTTATGTTTGCAGCTATCCCATTACGGGCTTCATTAGATTTAGCACCAAGCACAGAATGTGCACGGTTTGATAGCCATATATCACACTTATATTTGAACTCTCGTTTATGGTCCAGTGTTATACCCAGTACCATTTTTGCTAACATTTTCCTTTACTCGTGCAGAAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTG</genome_strand>
        <mrna_strand>TCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG.............................................................................ACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGC-T--TTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E285854" ref_strand="+" ref_description="SGN-E285854 [cLES-5-H22]">
      <seq>tccactctccttcttcttcctcctccatctactgtaactcaatctctccctctcttcgttactttcgacgtttctatacatttccatccagaagaaataattccaactccaatggcggtgcggtcttgctcgtcaaggcttatatggatgagaccacaaatccaatttctagttttgctaataaggtcatcggttcactgcctgtttttggtctcatagccagaattgtcaatgaggaaggtggtgttggaggcgattttattgattttgcggagttcaggaggcgagtcggtaacaagtgttccattaatgattcaagagctttttatgaatttcgagatcgacgtggcaagacaggggatcctctgtatgtgctactgtgttgttggttagctgcagtaggagctggtttactcaaatctgaggaaattttggaaggggtagcaaggcttagtttagcaaatgatattgaatttgaagaacaaaacttcatcgcaatgatgaatgaagcaagggagaagcgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75811" stop="77005"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76111" g_stop="76463" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="353" r_length="353" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76541" g_stop="76705" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="518" r_length="165" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E285854" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>518</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E285854" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76111" e_stop="76463"/>
          <exon e_start="76541" e_stop="76705"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAG</genome_strand>
        <mrna_strand>TCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG.............................................................................ACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E268185" ref_strand="+" ref_description="SGN-E268185 [cLEI-15-P5]">
      <seq>gctcctccatctactgtaacctcaatctctccctctcttcgttactttcgacgtttctatacatttccatccagaagaaataattccaactccaatggcggtgcggtcttgctcgtcaaggcttatatggatgagaccacaaatccaatttctagttttgctaataaggtcatcggttcactgcctgtttttggtctcatagccagaattgtcaatgaggaaggtggtgttggaggcgattttattgattttgcggagttcaagaggcgagtcggtaacaagtgttccattaatgattcaagagctttttatgaatttcgagatcgacgtggcaagacaggggatcctctgtatgtgctactgtgttgttggttagctgcagtaagagctggtttactcaaatctgaggaaattttggaaggggtagcaaggcttagtttagcaaatgatattgaatttgaagaacaaaacttcatcgcaatgatgaatgaagcaagggagaagcgatcaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75830" stop="77005"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76129" g_stop="76463" g_length="335"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="336" r_length="336" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76541" g_stop="76705" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="501" r_length="165" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E268185" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>500</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E268185" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76129" e_stop="76463"/>
          <exon e_start="76541" e_stop="76705"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCCTCCATCTACTGTAA-CTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAG</genome_strand>
        <mrna_strand>GCTCCTCCATCTACTGTAACCTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAAGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG.............................................................................ACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAAGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E551165" ref_strand="+" ref_description="SGN-E551165 [TUS-55-J18]">
      <seq>ctactgtaactcaatctctccctctcttcgttactttcgacgtttctatacatttccatccagaagaaataattccaactccaatggcggtgcggtcttgctcgtcaaggcttatatggatgagaccacaaatccaatttctagttttgctaataaggtcatcggttcactgcctgtttttggtctcatagccagaattgtcaatgaggaaggtggtgttggaggcgattttattgattttgcggagttcaggaggcgagtcggtaacaagtgttccattaatgattcaagagctttttatgaatttcgagatcgacgtggcaagacaggggatcctctgtatgtgctactgtgttgttggttagctgcagtaggagctggtttactcaaatctgaggaaattttggaaggggtagcaaggcttagtttagcaaatgatattgaatttgaagaacaaaacttcatcgcaatgatgaatgaagcaagggagaagcgatcaaagttgggagctccagcacctacnatccccatggaatttcgtgctgagaaagctcttgaagctatacatgtgtgttgctatggaagggatctgattgatgaagaagatgaaaaactgctaagtaccatgcttaatgctgtctttcctacagtcgggcggcaaaaggtagaaatcattgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75839" stop="77666"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76139" g_stop="76463" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="325" r_length="325" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76541" g_stop="76705" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="490" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76706" i_stop="77178" i_length="473">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="77179" g_stop="77366" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="491" r_stop="678" r_length="188" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E551165" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E551165" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76139" e_stop="76463"/>
          <exon e_start="76541" e_stop="76705"/>
          <exon e_start="77179" e_stop="77366"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAGGTTCGTAAGATTTCATTTGCCAACGATTTTTAGCTTCTTTTCATTTATGTTACCTTACTTTCAATGCTTATCAGTAAATTTATAGCATACTTACTCGGATACTGTCTTTGAGGCATACTTCAACTTCTGTTTATGCTTCATTCTTTTGATGTGGTACTTAGAACTCTGCCTCCATGTTGTTCGAATCCTCCAAAACTGCATATATTTTAGAGTATCGACACATGCAGACAGTATTCTTGGACGATTCAAGCAGCATAGCTCTGCCTAACTCTTATTGGGAAGCTTGCTTACAATAGTATATCGAGTAAATTTATGTTTGCAGCTATCCCATTACGGGCTTCATTAGATTTAGCACCAAGCACAGAATGTGCACGGTTTGATAGCCATATATCACACTTATATTTGAACTCTCGTTTATGGTCCAGTGTTATACCCAGTACCATTTTTGCTAACATTTTCCTTTACTCGTGCAGAAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTACCATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGCAAAAGGTAGAAATCATTGT</genome_strand>
        <mrna_strand>CTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG.............................................................................ACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGATCAAAGTTGGGAGCTCCAGCACCTACNATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTACCATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGCAAAAGGTAGAAATCATTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E688982" ref_strand="+" ref_description="SGN-E688982 [t3_tus_55_J18]">
      <seq>ctactgtaactcaatctctccctctcttcgttactttcgacgtttctatacatttccatccagaagaaataattccaactccaatggcggtgcggtcttgctcgtcaaggcttatatggatgagaccacaaatccaatttctagttttgctaataaggtcatcggttcactgcctgtttttggtctcatagccagaattgtcaatgaggaaggtggtgttggaggcgattttattgattttgcggagttcaggaggcgagtcggtaacaagtgttccattaatgattcaagagctttttatgaatttcgagatcgacgtggcaagacaggggatcctctgtatgtgctactgtgttgttggttagctgcagtaggagctggtttactcaaatctgaggaaattttggaaggggtagcaaggcttagtttagcaaatgatattgaatttgaagaacaaaacttcatcgcaatgatgaatgaagcaagggagaagcgatcaaagttgggagctccagcacctacnatccccatggaatttcgtgctgagaaagctcttgaagctatacatgtgtgttgctatggaagggatctgattgatgaagaagatgaaaaactgctaagtaccatgcttaatgctgtctttcctacagtcgggcggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75839" stop="77647"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76139" g_stop="76463" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="325" r_length="325" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76541" g_stop="76705" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="490" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76706" i_stop="77178" i_length="473">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="77179" g_stop="77347" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="491" r_stop="659" r_length="169" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E688982" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E688982" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76139" e_stop="76463"/>
          <exon e_start="76541" e_stop="76705"/>
          <exon e_start="77179" e_stop="77347"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAGGTTCGTAAGATTTCATTTGCCAACGATTTTTAGCTTCTTTTCATTTATGTTACCTTACTTTCAATGCTTATCAGTAAATTTATAGCATACTTACTCGGATACTGTCTTTGAGGCATACTTCAACTTCTGTTTATGCTTCATTCTTTTGATGTGGTACTTAGAACTCTGCCTCCATGTTGTTCGAATCCTCCAAAACTGCATATATTTTAGAGTATCGACACATGCAGACAGTATTCTTGGACGATTCAAGCAGCATAGCTCTGCCTAACTCTTATTGGGAAGCTTGCTTACAATAGTATATCGAGTAAATTTATGTTTGCAGCTATCCCATTACGGGCTTCATTAGATTTAGCACCAAGCACAGAATGTGCACGGTTTGATAGCCATATATCACACTTATATTTGAACTCTCGTTTATGGTCCAGTGTTATACCCAGTACCATTTTTGCTAACATTTTCCTTTACTCGTGCAGAAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTACCATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGC</genome_strand>
        <mrna_strand>CTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG.............................................................................ACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGATCAAAGTTGGGAGCTCCAGCACCTACNATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTACCATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E551326" ref_strand="+" ref_description="SGN-E551326 [TUS-54-G22]">
      <seq>ctactgtaactcaatctctccctctcttcgttactttcgacgtttctatacatttccatccagaagaaataattccaactccaatggcggtgcggtcttgctcgtcaaggcttatatggatgagaccacaaatccaatttctagttttgctaataaggtcatcggttcactgcctgtttttggtctcatagccagaattgtcaatgaggaaggtggtgttggaggcgattttattgattttgcggagttcaggaggcgagtcggtaacaagtgttccattaatgattcaagagctttttatgaatttcgagatcgacgtggcaagacaggggatcctctgtatgtgctactgtgttgttggttagctgcagtaggagctggtttactcaaatctgaggaaattttggaaggggtagcaaggcttagtttagcaaatgatattgaatttgaagaacaaacttcatcgcaatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75839" stop="76990"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76139" g_stop="76463" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="325" r_length="325" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76541" g_stop="76690" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="474" r_length="149" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E551326" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>475</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E551326" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76139" e_stop="76463"/>
          <exon e_start="76541" e_stop="76690"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATG</genome_strand>
        <mrna_strand>CTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG.............................................................................ACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAAC-AAACTTCATCGCAATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E688683" ref_strand="+" ref_description="SGN-E688683 [t3_tus_54_G22]">
      <seq>ctactgtaactcaatctctccctctcttcgttactttcgacgtttctatacatttccatccagaagaaataattccaactccaatggcggtgcggtcttgctcgtcaaggcttatatggatgagaccacaaatccaatttctagttttgctaataaggtcatcggttcactgcctgtttttggtctcatagccagaattgtcaatgaggaaggtggtgttggaggcgattttattgattttgcggagttcaggaggcgagtcggtaacaagtgttccattaatgattcaagagctttttatgaatttcgagatcgacgtggcaagacaggggatcctctgtatgtgctactgtgttgttggttagctgcagtaggagctggtttactcaaatctgaggaaattttggaaggggtagcaaggcttagtttagcaaatgatattgaatttgaagaacaaacttcatcgcaatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75839" stop="76990"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76139" g_stop="76463" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="325" r_length="325" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76541" g_stop="76690" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="474" r_length="149" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E688683" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>475</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E688683" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76139" e_stop="76463"/>
          <exon e_start="76541" e_stop="76690"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATG</genome_strand>
        <mrna_strand>CTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG.............................................................................ACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAAC-AAACTTCATCGCAATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E253860" ref_strand="+" ref_description="SGN-E253860 [cLEG-28-F4]">
      <seq>tactgtaactcaatctctccctctcttcgttactttcgacgtttctatacatttccatccagaagaaataattccaactccaatggcggtgcggtcttgctcgtcaaggcttatatggatgagaccacaaatccaatttctagttttgctaataaggtcatcggttcactgcctgtttttggtctcatagccagaattgtcaatgaggaaggtggtgttggaggcgattttattgattttgcggagttcacgaggcgagtcggtaacaagtgttccattaatgattcaagagctttttatgaatttcgagatcgacgtggcaagacaggggatcctctgtatgtgctactgtgttgttggttagctgcagtaggagctggtttactcaaatctgaggaaattttggaaggggtagcaaggcttagtttagcaaatgatattgaatttgaagaacaaaacttcatcgcaatgatgaatgaagcaagggagaagcgatcaaagttgggagctccagcacctacaatccccatggaatttcgtgctgagaaagctcttgaagctatacatgtgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75840" stop="77561"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76140" g_stop="76463" g_length="324"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="324" r_length="324" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76541" g_stop="76705" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="489" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76706" i_stop="77178" i_length="473">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="77179" g_stop="77261" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="572" r_length="83" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E253860" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>572</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E253860" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76140" e_stop="76463"/>
          <exon e_start="76541" e_stop="76705"/>
          <exon e_start="77179" e_stop="77261"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAGGTTCGTAAGATTTCATTTGCCAACGATTTTTAGCTTCTTTTCATTTATGTTACCTTACTTTCAATGCTTATCAGTAAATTTATAGCATACTTACTCGGATACTGTCTTTGAGGCATACTTCAACTTCTGTTTATGCTTCATTCTTTTGATGTGGTACTTAGAACTCTGCCTCCATGTTGTTCGAATCCTCCAAAACTGCATATATTTTAGAGTATCGACACATGCAGACAGTATTCTTGGACGATTCAAGCAGCATAGCTCTGCCTAACTCTTATTGGGAAGCTTGCTTACAATAGTATATCGAGTAAATTTATGTTTGCAGCTATCCCATTACGGGCTTCATTAGATTTAGCACCAAGCACAGAATGTGCACGGTTTGATAGCCATATATCACACTTATATTTGAACTCTCGTTTATGGTCCAGTGTTATACCCAGTACCATTTTTGCTAACATTTTCCTTTACTCGTGCAGAAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTG</genome_strand>
        <mrna_strand>TACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCACGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG.............................................................................ACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E263121" ref_strand="+" ref_description="SGN-E263121 [cLEG-62-C7]">
      <seq>tactgtaactcaatctctccctctcttcgttactttcgacgtttctatacatttccatccagaagaaataattccaactccaatggcggtgcggtcttgctcgtcaaggcttatatggatgagaccacaaatccaatttctagttttgctaataagggcatcggttcactgcctgtttttggtctcatagccagaattgtcaatgaagaaagtggtgttggaagcgattttattgattttgcggagttcaagaagcgaatcggtaacaagtgttccattaatgattcaagaactttttatgaatttccagaaccacctggcaagacaagggaacctctggatgtgctactggggtggtgggtaactgcaataagagctggtttactccaatctgaagaaattttggaaaggggagcaagggttaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75840" stop="76767"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76140" g_stop="76463" g_length="324"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="324" r_length="324" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77">
            <donor d_prob="0.999" d_score="0.90"/>
            <acceptor a_prob="0.925" a_score="0.80"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76541" g_stop="76644" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="428" r_length="104" r_score="0.846"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E263121" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>428</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E263121" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76140" e_stop="76463"/>
          <exon e_start="76541" e_stop="76644"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTT</genome_strand>
        <mrna_strand>TACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGGCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAAGAAAGTGGTGTTGGAAGCGATTTTATTGATTTTGCGGAGTTCAAGAAGCGAATCGGTAACAAGTGTTCCATTAATGATTCAAGAACTTTTTATGAATTTCCAGAACCACCTGGCAAG.............................................................................ACAAGGGAACCTCTGGATGTGCTACTGGGGTGGTGGGTAACTGCAATAAGAGCTGGTTTACTCCAATCTGAAGAAATTTTGGAAAGGGGAGCAAGGGTTAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E370187" ref_strand="+" ref_description="SGN-E370187 [TUS-28-K12]">
      <seq>ggatgagaccacaaatccaatttctagttttgctaataaggtcatcggttcactgcctgtttttggtctcatagccagaattgtcaatgaggaaggtggtgttggaggcgattttattgattttgcggagttcaggaggcgagtcggtaacaagtgttccattaatgattcaagagctttttatgaatttcgagatcgacgtggcaagacaggggatcctctgtatgtgctactgtgttgttggttagctgcagtaggagctggtttactcaaatctgaggaaattttggaaggggtagcaaggcttagtttagcaaatgatattgaatttgaagaacaaaacttcatcgcaatgatgaatgaagcaagggagaagcgatcaaagttgggagctccagcacctacaatccccatggaatttcgtgctgagaaagctcttgaagctatacatgtgtgttgctatggaagggatctgattgatgaagaagatgaaaaactgctaagtaccatgcttaatgctgtctttcctacagtcgggcggcaaaaggtagaaatcattgtcaaagagaaggcaaagagaatggcagatggaactgaagaaatcaaatatgagcccaagcaattatcaaagaagcagttcagatgcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75956" stop="77754"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76256" g_stop="76463" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="208" r_length="208" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76541" g_stop="76705" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="373" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76706" i_stop="77178" i_length="473">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="77179" g_stop="77454" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="648" r_length="275" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E370187" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>649</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E370187" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76256" e_stop="76463"/>
          <exon e_start="76541" e_stop="76705"/>
          <exon e_start="77179" e_stop="77454"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAGGTTCGTAAGATTTCATTTGCCAACGATTTTTAGCTTCTTTTCATTTATGTTACCTTACTTTCAATGCTTATCAGTAAATTTATAGCATACTTACTCGGATACTGTCTTTGAGGCATACTTCAACTTCTGTTTATGCTTCATTCTTTTGATGTGGTACTTAGAACTCTGCCTCCATGTTGTTCGAATCCTCCAAAACTGCATATATTTTAGAGTATCGACACATGCAGACAGTATTCTTGGACGATTCAAGCAGCATAGCTCTGCCTAACTCTTATTGGGAAGCTTGCTTACAATAGTATATCGAGTAAATTTATGTTTGCAGCTATCCCATTACGGGCTTCATTAGATTTAGCACCAAGCACAGAATGTGCACGGTTTGATAGCCATATATCACACTTATATTTGAACTCTCGTTTATGGTCCAGTGTTATACCCAGTACCATTTTTGCTAACATTTTCCTTTACTCGTGCAGAAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTACCATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGCAAAAGGTAGAAATCATTGTCAAAGAGAAGGCAAAGAGAATGGCAGATGGAACTGAAGAAATCAAATATGAGCCCAAGCAATTATCAAAAGAAGCAGTTCAGATGCAA</genome_strand>
        <mrna_strand>GGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG.............................................................................ACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTACCATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGCAAAAGGTAGAAATCATTGTCAAAGAGAAGGCAAAGAGAATGGCAGATGGAACTGAAGAAATCAAATATGAGCCCAAGCAATTATC-AAAGAAGCAGTTCAGATGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E271844" ref_strand="+" ref_description="SGN-E271844 [cLEM-8-D13]">
      <seq>ggatgagaccacaaatccaatttctagttttgctaataaggtcatcggttcactgcctgtttttggtctcatagccagaattgtcaatgaggaaggtggtgttggaggcgattttattgattttgcggagttcaggaggcgagtcggtaacaagtgttccattaatgattcaagagctttttatgaatttcgagatcgacgtggcaagacaggggatcctctgtatgtgctactgtgttgttggttagctgcagtaggagctggtttactcaaatctgaggaaattttggaaggggtagcaaggcttagtttagcaaatgatattgaatttgaagaacaaaacttcatcgcaatgatgaatgaagcaagggagaagcgatcaaagttgggagctccagcacctacaatccccatggaatttcgtgctgagaaagctcttgaagctatacatgtgtgttgctatggaagggatctgattgatgaagaagatgaaaaactgctaagtaccatgcttaatgctgtctttcctacagtcgggcggcaaaaggtagaaatcattgtcaaagagaaggcaaagagaatggcagatggaactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75956" stop="77701"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76256" g_stop="76463" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="208" r_length="208" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76541" g_stop="76705" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="373" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76706" i_stop="77178" i_length="473">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="77179" g_stop="77401" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="596" r_length="223" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E271844" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E271844" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76256" e_stop="76463"/>
          <exon e_start="76541" e_stop="76705"/>
          <exon e_start="77179" e_stop="77401"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAGGTTCGTAAGATTTCATTTGCCAACGATTTTTAGCTTCTTTTCATTTATGTTACCTTACTTTCAATGCTTATCAGTAAATTTATAGCATACTTACTCGGATACTGTCTTTGAGGCATACTTCAACTTCTGTTTATGCTTCATTCTTTTGATGTGGTACTTAGAACTCTGCCTCCATGTTGTTCGAATCCTCCAAAACTGCATATATTTTAGAGTATCGACACATGCAGACAGTATTCTTGGACGATTCAAGCAGCATAGCTCTGCCTAACTCTTATTGGGAAGCTTGCTTACAATAGTATATCGAGTAAATTTATGTTTGCAGCTATCCCATTACGGGCTTCATTAGATTTAGCACCAAGCACAGAATGTGCACGGTTTGATAGCCATATATCACACTTATATTTGAACTCTCGTTTATGGTCCAGTGTTATACCCAGTACCATTTTTGCTAACATTTTCCTTTACTCGTGCAGAAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTACCATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGCAAAAGGTAGAAATCATTGTCAAAGAGAAGGCAAAGAGAATGGCAGATGGAACTG</genome_strand>
        <mrna_strand>GGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG.............................................................................ACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTACCATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGCAAAAGGTAGAAATCATTGTCAAAGAGAAGGCAAAGAGAATGGCAGATGGAACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E346807" ref_strand="+" ref_description="SGN-E346807 [cTOF-32-M10]">
      <seq>tgttggaggcgattttattgattttgcggagttcaggaggcgagtcggtaacaagtgttccattaatgattcaagagctttttatgaatttcgagatcgacgtggcaagacaggggatcctctgtatgtgctactgtgttgttggttagctgcagtaggagctggtttactcaaatctgaggaaattttggaaggggtagcaaggcttagtttagcaaatgatattgaatttgaagaacaaaacttcatcgcaatgatgaatgaagcaagggagaagcgatcaaagttgggagctccagcacctacaatccccatggaatttcgtgctgagaaagctcttgaagctatacatgtgtgttgctatggaagggatctgattgatgaagaagatgaaaaactgctaagtaccatgcttaatgctgtctttcctacagtcgggcggcaaaaggtagaaatcattgtcaaagagaaggcaaagagaatggcagatggaactgaagaaatcaaatatgagcccaagcaattatcaaaagaagcagttcagatgcaaatgaaagaccttgaatttcttaagcaaaacagtttgaatcagtgaggcatgaaatttatcatcatttttaaagtaaattttaggtactggtgactaacaccaacaggaagattatcccacaaacattcngtataggaaatcacagccacatgtcatgaatgacaaatcttcttcgcacaatgtcgccaactaattaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="76055" stop="77955"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76355" g_stop="76463" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="109" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76541" g_stop="76705" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="274" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76706" i_stop="77178" i_length="473">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="77179" g_stop="77655" g_length="477"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="751" r_length="477" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E346807" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>751</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E346807" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76355" e_stop="76463"/>
          <exon e_start="76541" e_stop="76705"/>
          <exon e_start="77179" e_stop="77655"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAGGTTCGTAAGATTTCATTTGCCAACGATTTTTAGCTTCTTTTCATTTATGTTACCTTACTTTCAATGCTTATCAGTAAATTTATAGCATACTTACTCGGATACTGTCTTTGAGGCATACTTCAACTTCTGTTTATGCTTCATTCTTTTGATGTGGTACTTAGAACTCTGCCTCCATGTTGTTCGAATCCTCCAAAACTGCATATATTTTAGAGTATCGACACATGCAGACAGTATTCTTGGACGATTCAAGCAGCATAGCTCTGCCTAACTCTTATTGGGAAGCTTGCTTACAATAGTATATCGAGTAAATTTATGTTTGCAGCTATCCCATTACGGGCTTCATTAGATTTAGCACCAAGCACAGAATGTGCACGGTTTGATAGCCATATATCACACTTATATTTGAACTCTCGTTTATGGTCCAGTGTTATACCCAGTACCATTTTTGCTAACATTTTCCTTTACTCGTGCAGAAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTACCATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGCAAAAGGTAGAAATCATTGTCAAAGAGAAGGCAAAGAGAATGGCAGATGGAACTGAAGAAATCAAATATGAGCCCAAGCAATTATCAAAAGAAGCAGTTCAGATGCAAATGAAAGACCTTGAATTTCTTAAGCAAAACAGTTTGAATCAGTGAGGCATGAAATTTATCATCATTTTTAAAGTAAATTTTAGGTACTGGTGACTAACACCAACAGGAAGATTATCCCACAAACATTCGGTATAGGAAATCACAGCCACATGTCATGAATGACAAATCTTCTTCGCACAATGTCGCCAACTAATTAAAAAA</genome_strand>
        <mrna_strand>TGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG.............................................................................ACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTACCATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGCAAAAGGTAGAAATCATTGTCAAAGAGAAGGCAAAGAGAATGGCAGATGGAACTGAAGAAATCAAATATGAGCCCAAGCAATTATCAAAAGAAGCAGTTCAGATGCAAATGAAAGACCTTGAATTTCTTAAGCAAAACAGTTTGAATCAGTGAGGCATGAAATTTATCATCATTTTTAAAGTAAATTTTAGGTACTGGTGACTAACACCAACAGGAAGATTATCCCACAAACATTCNGTATAGGAAATCACAGCCACATGTCATGAATGACAAATCTTCTTCGCACAATGTCGCCAACTAATTAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E296342" ref_strand="+" ref_description="SGN-E296342 [cLET-19-D16]">
      <seq>gattttattgattttttggagtttaggaggcgagtcggtaacaagtgttccattaatgattcaagagctttttatgaatttcgagatcgacgtggcaagacaggggatcctctgtatgtgctactgtgttgttggttagctgcagtaggagctggtttactcaaatctgaggaaattttggaaggggtagcaaggcttagtttagcaaatgatattgaatttgaagaacaaaacttcatcgcaatgatgaatgaagcaagggagaagcgatcaaagttgggagctccagcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="76065" stop="77506"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76365" g_stop="76463" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76541" g_stop="76705" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="264" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76706" i_stop="77178" i_length="473">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="77179" g_stop="77206" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="292" r_length="28" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E296342" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>292</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E296342" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76365" e_stop="76463"/>
          <exon e_start="76541" e_stop="76705"/>
          <exon e_start="77179" e_stop="77206"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAGGTTCGTAAGATTTCATTTGCCAACGATTTTTAGCTTCTTTTCATTTATGTTACCTTACTTTCAATGCTTATCAGTAAATTTATAGCATACTTACTCGGATACTGTCTTTGAGGCATACTTCAACTTCTGTTTATGCTTCATTCTTTTGATGTGGTACTTAGAACTCTGCCTCCATGTTGTTCGAATCCTCCAAAACTGCATATATTTTAGAGTATCGACACATGCAGACAGTATTCTTGGACGATTCAAGCAGCATAGCTCTGCCTAACTCTTATTGGGAAGCTTGCTTACAATAGTATATCGAGTAAATTTATGTTTGCAGCTATCCCATTACGGGCTTCATTAGATTTAGCACCAAGCACAGAATGTGCACGGTTTGATAGCCATATATCACACTTATATTTGAACTCTCGTTTATGGTCCAGTGTTATACCCAGTACCATTTTTGCTAACATTTTCCTTTACTCGTGCAGAAGCGATCAAAGTTGGGAGCTCCAGCAC</genome_strand>
        <mrna_strand>GATTTTATTGATTTTTTGGAGTTTAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG.............................................................................ACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGATCAAAGTTGGGAGCTCCAGCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E367370" ref_strand="+" ref_description="SGN-E367370 [cLPT-7-E6]">
      <seq>tgctaaatctgatgaagcccgcaatgggatagctgcaaacataaatttactcgatatattgtaagcaagcttcccaataagagttaggcagagctatgctgcttgaatcgtccaagaatactgtctgcatgtgtcgatactctaaaatatatgcagttttggaggattcgaacaacatggaggcagagttctaagtaccacatcaaaagaatgaagcataaacagaagttgaagtatgcctcaaagacagtatccgagtaagtatgctataaatttactgataagcattgaaagtaaggtaacataaatgaaaagaagctaaaaatctgtggcaaatgaaatcttactaacctcccttgcttcattcatcattgcgatgaagttctgttcttcaaattcaatatcatttgctaaactaagccttgctaccccttccaaaatttcctcagatttgagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="77359" stop="76300"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77059" g_stop="76600" g_length="460"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="457" r_length="457" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E367370" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>460</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E367370" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77059" e_stop="76600"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTAAATCTAATGAAGCCCGTAATGGGATAGCTGCAAACATAAATTTACTCGATATACTATTGTAAGCAAGCTTCCCAATAAGAGTTAGGCAGAGCTATGCTGCTTGAATCGTCCAAGAATACTGTCTGCATGTGTCGATACTCTAAAATATATGCAGTTTTGGAGGATTCGAACAACATGGAGGCAGAGTTCTAAGTACCACATCAAAAGAATGAAGCATAAACAGAAGTTGAAGTATGCCTCAAAGACAGTATCCGAGTAAGTATGCTATAAATTTACTGATAAGCATTGAAAGTAAGGTAACATAAATGAAAAGAAGCTAAAAATCGTTGGCAAATGAAATCTTACGAACCTCCCTTGCTTCATTCATCATTGCGATGAAGTTTTGTTCTTCAAATTCAATATCATTTGCTAAACTAAGCCTTGCTACCCCTTCCAAAATTTCCTCAGATTTGAGT</genome_strand>
        <mrna_strand>TGCTAAATCTGATGAAGCCCGCAATGGGATAGCTGCAAACATAAATTTACTCG--ATA-TATTGTAAGCAAGCTTCCCAATAAGAGTTAGGCAGAGCTATGCTGCTTGAATCGTCCAAGAATACTGTCTGCATGTGTCGATACTCTAAAATATATGCAGTTTTGGAGGATTCGAACAACATGGAGGCAGAGTTCTAAGTACCACATCAAAAGAATGAAGCATAAACAGAAGTTGAAGTATGCCTCAAAGACAGTATCCGAGTAAGTATGCTATAAATTTACTGATAAGCATTGAAAGTAAGGTAACATAAATGAAAAGAAGCTAAAAATCTGTGGCAAATGAAATCTTACTAACCTCCCTTGCTTCATTCATCATTGCGATGAAGTTCTGTTCTTCAAATTCAATATCATTTGCTAAACTAAGCCTTGCTACCCCTTCCAAAATTTCCTCAGATTTGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E370186" ref_strand="+" ref_description="SGN-E370186 [TUS-28-K12](-)">
      <seq>caaaacttcatcgcaatgatgaatgaagcaagggagaagcgatcaaagttgggagctccagcacctacaatccccatggaatttcgtgctgagaaagctcttgaagctatacatgtgtgttgctatggaagggatctgattgatgaagaagatgaaaaactgctaagtaccatgcttaatgctgtctttcctacagtcgggcggcaaaaggtagaaatcattgtcaaagagaaggcaaagagaatggcagatggaactgaagaaatcaaatatgagcccaagcaattatcaaaagaagcagttcagatgcaaatgaaagaccttgaatttcttaagcaaaacagtttgaatcagtgaggcatgaaatttatcatcatttttaaagtaaattttaggtactggtgactaacaccaacaggaagattatcccacaaacattcggtataggaaatcacagccacatgtcatgaatgacaaatcttcttcgcacaatgtcgccaactaattaaaaaacattgcatgtgtatgctgcctgctctctttcttttgtgatcagtctgcattttctacttgcacttgaaagatatagtggctctgatttgtattcaaaaattacctattactataactgtaatgttaatgacgacagtctcaaaacaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="76370" stop="78096"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76670" g_stop="76705" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76706" i_stop="77178" i_length="473">
            <donor d_prob="0.981" d_score="0.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77179" g_stop="77815" g_length="637"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="673" r_length="637" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E370186" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>673</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E370186" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76670" e_stop="76705"/>
          <exon e_start="77179" e_stop="77815"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAACTTCATCGCAATGATGAATGAAGCAAGGGAGGTTCGTAAGATTTCATTTGCCAACGATTTTTAGCTTCTTTTCATTTATGTTACCTTACTTTCAATGCTTATCAGTAAATTTATAGCATACTTACTCGGATACTGTCTTTGAGGCATACTTCAACTTCTGTTTATGCTTCATTCTTTTGATGTGGTACTTAGAACTCTGCCTCCATGTTGTTCGAATCCTCCAAAACTGCATATATTTTAGAGTATCGACACATGCAGACAGTATTCTTGGACGATTCAAGCAGCATAGCTCTGCCTAACTCTTATTGGGAAGCTTGCTTACAATAGTATATCGAGTAAATTTATGTTTGCAGCTATCCCATTACGGGCTTCATTAGATTTAGCACCAAGCACAGAATGTGCACGGTTTGATAGCCATATATCACACTTATATTTGAACTCTCGTTTATGGTCCAGTGTTATACCCAGTACCATTTTTGCTAACATTTTCCTTTACTCGTGCAGAAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTACCATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGCAAAAGGTAGAAATCATTGTCAAAGAGAAGGCAAAGAGAATGGCAGATGGAACTGAAGAAATCAAATATGAGCCCAAGCAATTATCAAAAGAAGCAGTTCAGATGCAAATGAAAGACCTTGAATTTCTTAAGCAAAACAGTTTGAATCAGTGAGGCATGAAATTTATCATCATTTTTAAAGTAAATTTTAGGTACTGGTGACTAACACCAACAGGAAGATTATCCCACAAACATTCGGTATAGGAAATCACAGCCACATGTCATGAATGACAAATCTTCTTCGCACAATGTCGCCAACTAATTAAAAAACATTGCATGTGTATGCTGCCTGCTCTCTTTCTTTTGTGATCAGTCTGCATTTTCTACTTGCACTTGAAAGATATAGTGGCTCTGATTTGTATTCAAAAATTACCTATTACTATAACTGTAATGTTAATGACGACAGTCTCACGTCGAAAATGAGTAAACT</genome_strand>
        <mrna_strand>CAAAACTTCATCGCAATGATGAATGAAGCAAGGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTACCATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGCAAAAGGTAGAAATCATTGTCAAAGAGAAGGCAAAGAGAATGGCAGATGGAACTGAAGAAATCAAATATGAGCCCAAGCAATTATCAAAAGAAGCAGTTCAGATGCAAATGAAAGACCTTGAATTTCTTAAGCAAAACAGTTTGAATCAGTGAGGCATGAAATTTATCATCATTTTTAAAGTAAATTTTAGGTACTGGTGACTAACACCAACAGGAAGATTATCCCACAAACATTCGGTATAGGAAATCACAGCCACATGTCATGAATGACAAATCTTCTTCGCACAATGTCGCCAACTAATTAAAAAACATTGCATGTGTATGCTGCCTGCTCTCTTTCTTTTGTGATCAGTCTGCATTTTCTACTTGCACTTGAAAGATATAGTGGCTCTGATTTGTATTCAAAAATTACCTATTACTATAACTGTAATGTTAATGACGACAGTCTCAAAACAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E552015" ref_strand="+" ref_description="SGN-E552015 [cTSB-2-J11]">
      <seq>ctacaatccccatggaatttcgtgctgagaaagctcttgaagctatacatgtgtgttgctatggaagggatctgattgatgaagaagatgaaaaactgctaagtaccatgcttaatgctgtctttcctacagtcgggcggcaaaaggtagaaatcattgtcaaagagaaggcaaagagaatggcagatggaactgaagaaatcaaatatgagcccaagcaattatcaaaagaagcagttcagatgcaaatgaaagaccttgaatttcttaagcaaaacagtttgaatcagtgaggcatgaaatttatcatcatttttaaagtaaattttaggtactggtgactaacaccaacaggaagattatcccacaaacattcggtataggaaatcacagccacatgtcatgaatgacaaatcttcttcgcacaatgtcgccaactaattaaaaaacattgcatgtgtatgctgcctgctctctttcttttgtgatcagtctgcattttctacttgcacttgaaagaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="76907" stop="78030"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77207" g_stop="77730" g_length="524"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="524" r_length="524" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77731" i_stop="77929" i_length="199">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.875" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77930" g_stop="77937" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="532" r_length="8" r_score="0.875"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E552015" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E552015" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77207" e_stop="77730"/>
          <exon e_start="77930" e_stop="77937"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTACCATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGCAAAAGGTAGAAATCATTGTCAAAGAGAAGGCAAAGAGAATGGCAGATGGAACTGAAGAAATCAAATATGAGCCCAAGCAATTATCAAAAGAAGCAGTTCAGATGCAAATGAAAGACCTTGAATTTCTTAAGCAAAACAGTTTGAATCAGTGAGGCATGAAATTTATCATCATTTTTAAAGTAAATTTTAGGTACTGGTGACTAACACCAACAGGAAGATTATCCCACAAACATTCGGTATAGGAAATCACAGCCACATGTCATGAATGACAAATCTTCTTCGCACAATGTCGCCAACTAATTAAAAAACATTGCATGTGTATGCTGCCTGCTCTCTTTCTTTTGTGATCAGTCTGCATTTTCTACTTGCACTTGAAAGATATAGTGGCTCTGATTTGTATTCAAAAATTACCTATTACTATAACTGTAATGTTAATGACGACAGTCTCACGTCGAAAATGAGTAAACTCCTTATTAAGGCTTGAAAATTCCTCCTTTTGAACTAGAACTAGCTTTTGGAGTGTGAATTAGATTTAAGATCTAATTCAAACATGTTATATACTAATTGACTTTTTTATTATAGACAAAAAA</genome_strand>
        <mrna_strand>CTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTACCATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGCAAAAGGTAGAAATCATTGTCAAAGAGAAGGCAAAGAGAATGGCAGATGGAACTGAAGAAATCAAATATGAGCCCAAGCAATTATCAAAAGAAGCAGTTCAGATGCAAATGAAAGACCTTGAATTTCTTAAGCAAAACAGTTTGAATCAGTGAGGCATGAAATTTATCATCATTTTTAAAGTAAATTTTAGGTACTGGTGACTAACACCAACAGGAAGATTATCCCACAAACATTCGGTATAGGAAATCACAGCCACATGTCATGAATGACAAATCTTCTTCGCACAATGTCGCCAACTAATTAAAAAACATTGCATGTGTATGCTGCCTGCTCTCTTTCTTTTGTGATCAGTCTGCATTTTCTACTTGCACTTGAAAGAAAAA.......................................................................................................................................................................................................AAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E281267" ref_strand="+" ref_description="SGN-E281267 [cLEL-1-A16](-)">
      <seq>ttttttttttttttttttttagaaaatgcagactgatcacaaaagaaagagagcaggcagcatacacatgcaatgttttttaattagttggcgacattgtgcgaagaagatttgtcattcatgacatgtggctgtgatttcctataccgaatgtttgtgggataatcttcctgttggtgttagtcagcagtacctaaaatttactttaaaaatgatgataaatttcatgcctcactgattcaaactgttttgcttaagctcgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="113226" stop="77173"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77730" g_stop="77466" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="265" r_length="265" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E281267" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>265</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E281267" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77730" e_stop="77466"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATATCTTTCAAGTGCAAGTAGAAAATGCAGACTGATCACAAAAGAAAGAGAGCAGGCAGCATACACATGCAATGTTTTTTAATTAGTTGGCGACATTGTGCGAAGAAGATTTGTCATTCATGACATGTGGCTGTGATTTCCTATACCGAATGTTTGTGGGATAATCTTCCTGTTGGTGTTAGTCACCAGTACCTAAAATTTACTTTAAAAATGATGATAAATTTCATGCCTCACTGATTCAAACTGTTTTGCTTAAGAAATTCA</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTTTTTAGAAAATGCAGACTGATCACAAAAGAAAGAGAGCAGGCAGCATACACATGCAATGTTTTTTAATTAGTTGGCGACATTGTGCGAAGAAGATTTGTCATTCATGACATGTGGCTGTGATTTCCTATACCGAATGTTTGTGGGATAATCTTCCTGTTGGTGTTAGTCAGCAGTACCTAAAATTTACTTTAAAAATGATGATAAATTTCATGCCTCACTGATTCAAACTGTTTTGCTTAAGCTCGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E202904" ref_strand="+" ref_description="SGN-E202904 [cLEB-1-P1]">
      <seq>gcacgagcttaagcaaaacagtttgaatcagtgaggcatgaaatttatcatcatttttaaagtaaattctaggtactggtgactaacaccaacaggaagattatcccacaaacattcggtataggaaatcacagccacatgtcatgaatgacaaatcttcttcgcacaatgtcgccaactaattaaaaaacattgcatgtgtatgctgcctgctctctttcttttgtgatcagtctgcattttctaaaaaaaaaaaagaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="77173" stop="78011"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77466" g_stop="77711" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="246" r_length="246" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="247" polyA_stop="265"/>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E202904" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>246</cumulative_length_of_scored_exons>
        <coverage percentage="0.928" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E202904" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77466" e_stop="77711"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAATTTCTTAAGCAAAACAGTTTGAATCAGTGAGGCATGAAATTTATCATCATTTTTAAAGTAAATTTTAGGTACTGGTGACTAACACCAACAGGAAGATTATCCCACAAACATTCGGTATAGGAAATCACAGCCACATGTCATGAATGACAAATCTTCTTCGCACAATGTCGCCAACTAATTAAAAAACATTGCATGTGTATGCTGCCTGCTCTCTTTCTTTTGTGATCAGTCTGCATTTTCTA</genome_strand>
        <mrna_strand>GCACGAGCTTAAGCAAAACAGTTTGAATCAGTGAGGCATGAAATTTATCATCATTTTTAAAGTAAATTCTAGGTACTGGTGACTAACACCAACAGGAAGATTATCCCACAAACATTCGGTATAGGAAATCACAGCCACATGTCATGAATGACAAATCTTCTTCGCACAATGTCGCCAACTAATTAAAAAACATTGCATGTGTATGCTGCCTGCTCTCTTTCTTTTGTGATCAGTCTGCATTTTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E552969" ref_strand="+" ref_description="SGN-E552969 [cTSB-5-J5]">
      <seq>gtggatcccccgggctgcaggctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataaaattggctactttatgttcttctagaactctaatgcagtttttctccgggttagctgtaacttttgtgatggaaacatatgtcctcttctgtgatggaggtctatgtatgatcctccagtgtctttcttgagtctataactgaacttccttgctgtggtaaaaaaaaaaaaaaaaaaaataaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80240" stop="53863"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79937" g_stop="79917" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="40" r_length="21" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="165" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="278" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78242" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="628" r_length="350" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="78241" i_stop="78140" i_length="102">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.321" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="78139" g_stop="78112" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="629" r_stop="655" r_length="27" r_score="0.607"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E552969" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>637</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E552969" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79937" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78242"/>
          <exon e_start="78139" e_stop="78112"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAATTATCTTCTTGTTTGCTAGTATTTGTTGCAGTCGCTAGGTTAATCTTTTCTACGACGCCAGGAAAAACTTGGCAAAAATAATGAAATGA</genome_strand>
        <mrna_strand>GGCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTA......................................................................................................-AAAAAAAAAAAAAAAAAAATAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E262133" ref_strand="+" ref_description="SGN-E262133 [cLEG-58-B13]">
      <seq>tttttttttttttttttttttttttttagcaaacaagaagataattttttttaaaacataaaatgtccaggaacaccagtacaactaccacagcaaggaagttcagttatagactcaagaaagacactggaggatcatacatagacctccatcacagaagaggacatatgtttccatcacaaaagttacagctaacccggagaaaaactgcattagagttctagaagaacataaagtagccaattttatcagcttattgaagacacggcttgccagtttatttaacacagaaatctagacacaactctatacataaataatttagcgatactgagggggcaattccccatccttgacaatgtaattttcagcagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="53866" stop="78831"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78157" g_stop="78531" g_length="375"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="375" r_length="375" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E262133" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>375</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E262133" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78157" e_stop="78531"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTAACCTAGCGACTGCAACAAATACTAGCAAACAAGAAGATAATTTTTTTTAAAACATAAAATGTCCAGGAACACCAGTACAACTACCACAGCAAGGAAGTTCAGTTATAGACTCAAGAAAGACACTGGAGGATCATACATAGACCTCCATCACAGAAGAGGACATATGTTTCCATCACAAAAGTTACAGCTAACCCGGAGAAAAACTGCATTAGAGTTCTAGAAGAACATAAAGTAGCCAATTTTATCAGCTTATTGAAGACACGGCTTGCCAGTTTATTTAACACAGAAATCTAGACACAACTCTATACATAAATAATTTAGCGATACTGAGGTGCCAATTCCCCATCCTTGACAATGTAATTTTCAGCAGG</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTTTTTTTTTTTTAGCAAACAAGAAGATAATTTTTTTTAAAACATAAAATGTCCAGGAACACCAGTACAACTACCACAGCAAGGAAGTTCAGTTATAGACTCAAGAAAGACACTGGAGGATCATACATAGACCTCCATCACAGAAGAGGACATATGTTTCCATCACAAAAGTTACAGCTAACCCGGAGAAAAACTGCATTAGAGTTCTAGAAGAACATAAAGTAGCCAATTTTATCAGCTTATTGAAGACACGGCTTGCCAGTTTATTTAACACAGAAATCTAGACACAACTCTATACATAAATAATTTAGCGATACTGAGGGGGCAATTCCCCATCCTTGACAATGTAATTTTCAGCAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E249185" ref_strand="-" ref_description="SGN-E249185 [cLEF-50-O21]">
      <seq>cttgtaacagcggtcatattgcaggatacagtgcagatgtttggtacccacaaccagctcccaaggaccatttatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtccttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataaggtgataaaattggctactttatgttcttctagaactctaatgcagtttttccccgggttagctgtaacttttgtgatgcaaacatatgtcctcttctgtgatggaggtctatgtatgatcctccagtgtctttcttgagtcaataactgaacttccttgctgtggtagttgcactggtgttcctggacattttatgttttaaaaaaaattatcttcttgttcgctagtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="79374" stop="77880"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79074" g_stop="79051" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="0.00"/>
            <acceptor a_prob="0.964" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="137" r_length="113" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78591" g_stop="78171" g_length="421"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="558" r_length="421" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E249185" ref_strand="-">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E249185" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="79074" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78171"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAATTATCTTCTTGTTTGCTAGTATTTGTTGCA</genome_strand>
        <mrna_strand>CTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGCAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATTTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTCCTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGGTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCCCCGGGTTAGCTGTAACTTTTGTGATGCAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCAATAACTGAACTTCCTTGCTGTGGTAGTTGCACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAATTATCTTCTTGTTCGCTAGTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E353122" ref_strand="+" ref_description="SGN-E353122 [cTOS-14-A21]">
      <seq>gaagatctcgataagatgctctcgaaatgtgacatagaggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataaaattggctactttatgttcttctagaactctaatgcagtttttctccgggttagctgtaacttttgtgatggaaacatatgtcctcttctgtgatggaggtctatgtatgatcctccagtgtctttcttgagtctataactgaacttccttgctgtggtagttgtactggtgttcctggacattttatgttttaaaaaattatcttcttgtttgctagtaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80287" stop="77880"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79987" g_stop="79917" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="196" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="309" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78181" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="310" r_stop="718" r_length="409" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="719" polyA_stop="730"/>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E353122" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E353122" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79987" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78181"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAATTATCTTCTTGTTTGCTAGT</genome_strand>
        <mrna_strand>GAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGAGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTT--AAAAAATTATCTTCTTGTTTGCTAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E214434" ref_strand="+" ref_description="SGN-E214434 [cLEC-77-D21]">
      <seq>gacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataaaattggctactttatgttcttctagaactctaatgcagtttttctccgggttagctgtaacttttgtgatggaaacatatgtcctcttctgtgatggaggtctatgtatgatcctccagtgtctttcttgagtctataactgaacttccttgctgtggtagttgtactggtgttcctggacattttatgttttaaaaaaaattatcttcttgtttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80257" stop="77885"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79957" g_stop="79917" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="41" r_length="41" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="166" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="279" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78185" g_length="407"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="686" r_length="407" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E214434" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>686</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E214434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79957" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78185"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAATTATCTTCTTGTTTGC</genome_strand>
        <mrna_strand>GACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAATTATCTTCTTGTTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E297153" ref_strand="-" ref_description="SGN-E297153 [cLET-29-K23]">
      <seq>gtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataaaattggctactttatgttcttctagaactctaatgcagtttttctccgggttagctgtaacttttgtgatggaaacatatgtcctcttctgtgatggaggtctatgtatgatcctccagtgtctttcttgagtctataactgaacttccttgctgtggtagttgtactggtgttcctggacattttatgttttaaaaaaaattatcttcttgtttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="79124" stop="77886"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79062" g_stop="79051" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="12" r_length="12" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="0.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="125" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78591" g_stop="78186" g_length="406"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="531" r_length="406" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E297153" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E297153" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="79062" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78186"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAATTATCTTCTTGTTTG</genome_strand>
        <mrna_strand>GTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAATTATCTTCTTGTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E232459" ref_strand="+" ref_description="SGN-E232459 [cLEL-5-J6](-)">
      <seq>ccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataaaattggctactttatgttcttctagaactctaatgcagtttttctccgggttagctgtaacttttgtgatggaaacatatgtcctcttctgtgatggaggtctatgtatgatcctccagtgtctttcttgagtctataactgaacttccttgctgtggtagttgtactggtgttcctggacattttatgttttaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="79086" stop="53868"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78786" g_stop="78703" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="78591" g_stop="78187" g_length="405"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="489" r_length="405" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E232459" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E232459" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78786" e_stop="78703"/>
          <exon e_start="78591" e_stop="78187"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAATTATCTTCTTGTTT</genome_strand>
        <mrna_strand>CCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E232383" ref_strand="+" ref_description="SGN-E232383 [cLEL-5-J6](-)">
      <seq>agggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataaaattggctactttatgttcttctagaactctaatgcagtttttctccgggttagctgtaacttttgtgatggaaacatatgtcctcttctgtgatggaggtctatgtatgatcctccagtgtctttcttgagtctataactgaacttccttgctgtggtagttgtactggtgttcctggacattttatgttttaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="78845" stop="53868"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78545" g_stop="78187" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="359" r_length="359" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E232383" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>359</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E232383" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78545" e_stop="78187"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAATTATCTTCTTGTTT</genome_strand>
        <mrna_strand>AGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E349959" ref_strand="+" ref_description="SGN-E349959 [cTOS-4-A5]">
      <seq>gaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataaaattggctactttatgttcttctagaactctaatgcagtttttctccgggttagctgtaacttttgtgatggaaacatatgtcctcttctgtgatggaggtctatgtatgatccctcagtgtctttcttgagtctataactgaacttccttgctgtggtagntgtactggtgttcctggacattttatgttttaaaaaaattatcttttcttgttgctagtaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80287" stop="77880"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79987" g_stop="79917" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="196" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="309" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78194" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="310" r_stop="706" r_length="397" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="721" polyA_stop="733"/>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E349959" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>707</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349959" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79987" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78194"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAATTATCTT</genome_strand>
        <mrna_strand>GAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCCTCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGNTGTACTGGTGTTCCTGGACATTTTATGTTTT-AAAAAAATTATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E337036" ref_strand="+" ref_description="SGN-E337036 [cTOE-20-H11]">
      <seq>aatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtaaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataaaattggctactttatgttcttctagaactctaatgcagtttttctccgggttagctgtaacttttgtgatggaaacatatgtcctcttctgtgatggaggtctatgtatgatcctccagtgtctttcttgagtctataactgaacttccttgctgtggtagttgtactggtgttcctggacattttatgttttaaaaaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="79472" stop="77900"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79172" g_stop="79051" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="235" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78591" g_stop="78200" g_length="392"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="627" r_length="392" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E337036" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>627</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E337036" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79172" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78200"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAAT</genome_strand>
        <mrna_strand>AATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTAAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E747059" ref_strand="+" ref_description="SGN-E747059 [GI|56562180]">
      <seq>caggtcgcttctaagtactgggccttcgccctttcctataaaaagccgttacgtctctccagtaagtcatctcagccaactggagtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataaaattggctactttatgttcttctagaactctaatgcagtttttctccgggttagctgtaacttttgtgatggaaacatatgtcctcttctgtgatggaggtctatgtatgatcctccagtgtctttcttgagtctataactgaacttccttgctgtggtagttgtactggtgttcctggacattttatgttttaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="83062" stop="77901"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82762" g_stop="82533" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="230" r_length="230" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="402" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="79917" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="943" r_length="541" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="944" r_stop="1068" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="1069" r_stop="1181" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="78591" g_stop="78201" g_length="391"/>
          <reference_exon_boundary r_type="cDNA" r_start="1182" r_stop="1572" r_length="391" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E747059" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1572</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E747059" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82762" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78201"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGTCGCTTCTAAGTACTGGGCCTTCGCCCTTTCCTATAAAAAGCCGTTACGTCTCTCCAGTAAGTCATCTCAGCCAACTGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAA</genome_strand>
        <mrna_strand>CAGGTCGCTTCTAAGTACTGGGCCTTCGCCCTTTCCTATAAAAAGCCGTTACGTCTCTCCAGTAAGTCATCTCAGCCAACTGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E267323" ref_strand="-" ref_description="SGN-E267323 [cLEI-17-K21]">
      <seq>agctcccaaggaccatttatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataaaattggctactttatgttcttctagaactctaatgcagtttttctccgggttagctgtaacttttgtgatggaaacatatgtcctcttctgtgatggaggtctatgtatgatcctccagtgtctttcttgagtctataactgaacttccttgctgtggtagttgtactggtgttcctggacattttatgttttaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="79084" stop="77905"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78784" g_stop="78703" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="82" r_length="82" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="78591" g_stop="78205" g_length="387"/>
          <reference_exon_boundary r_type="cDNA" r_start="83" r_stop="469" r_length="387" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E267323" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267323" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="78784" e_stop="78703"/>
          <exon e_start="78591" e_stop="78205"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAA</genome_strand>
        <mrna_strand>AGCTCCCAAGGACCATTTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E353837" ref_strand="+" ref_description="SGN-E353837 [cTOS-10-J3]">
      <seq>atcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataaaattggctactttatgttcttctagaactctaatgcagtttttctccgggttagctgtaacttttgtgatggaaacatatgtcctcttctgtgatggaggtctatgtatgatcctccagtgtctttcttgagtctataactgaacttccttgctgtggtagttgtactggtgttcctggacattttatgtttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80245" stop="77909"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79945" g_stop="79917" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="29" r_length="29" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="154" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="267" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78209" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="650" r_length="383" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E353837" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>650</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E353837" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79945" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78209"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTT</genome_strand>
        <mrna_strand>ATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E269085" ref_strand="-" ref_description="SGN-E269085 [cLEI-16-L14]">
      <seq>tgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataaaattggctactttatgttcttctagaactctaatgcagtttttctccgggttagctgtaacttttgtgatggaaacatatgtcctcttctgtgatggaggtctatgtatgatcctccagtgtctttcttgagtctataactgaacttccttgctgtggtaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="79415" stop="77942"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79115" g_stop="79051" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="65" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="66" r_stop="178" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78591" g_stop="78236" g_length="356"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="534" r_length="356" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E269085" ref_strand="-">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E269085" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="79115" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78236"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTA</genome_strand>
        <mrna_strand>TGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E241436" ref_strand="+" ref_description="SGN-E241436 [cLED-28-P10]">
      <seq>tgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataaaattggctactttatgttcttctagaactctaatgcagtttttctccgggttagctgtaacttttgtgatggaaacatatgtcctcttctgtgatggaggtctatgtatgatcctccagtgtctttcttgagtctataactgaacttccttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="79102" stop="77949"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78802" g_stop="78703" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="100" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="78591" g_stop="78249" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="443" r_length="343" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E241436" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>443</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E241436" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78802" e_stop="78703"/>
          <exon e_start="78591" e_stop="78249"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGC</genome_strand>
        <mrna_strand>TGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E350172" ref_strand="+" ref_description="SGN-E350172 [cTOS-4-A6]">
      <seq>gaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgacctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagatgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgatgtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagaggtgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataagattggctactttatgttcttctagaactctaatgcnagttttctccgggttagctgtaactattgtgatggaaacatatgtcctcttctgtgatggaagtctatgtatgatccatcagtgtctctcttgagtctataactgaacttccctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80287" stop="77950"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79987" g_stop="79917" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="72" r_length="72" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="73" r_stop="197" r_length="125" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="0.98"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="310" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78250" g_length="342"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="652" r_length="342" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E350172" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>651</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E350172" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79987" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78250"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACG-CCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTG</genome_strand>
        <mrna_strand>GAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGACCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGATGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGATGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGGTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAGATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCNAGTTTTCTCCGGGTTAGCTGTAACTATTGTGATGGAAACATATGTCCTCTTCTGTGATGGAAGTCTATGTATGATCCATCAGTGTCTCTCTTGAGTCTATAACTGAACTTCCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E555030" ref_strand="+" ref_description="SGN-E555030 [cTSC-6-D13]">
      <seq>agcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataaaattggctactttatgttcttctagaactctaatgcagtttttctccgggttagctgtaacttttgtgatggaaacatatgtcctcttctgtgaaggaggtctatgtatgatcctccaatgtctttcttgagtctataactgaacttccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80585" stop="77953"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80285" g_stop="79917" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="369" r_length="369" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="370" r_stop="494" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="495" r_stop="607" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78251" g_length="341"/>
          <reference_exon_boundary r_type="cDNA" r_start="608" r_stop="948" r_length="341" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E555030" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>948</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E555030" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80285" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78251"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTT</genome_strand>
        <mrna_strand>AGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGAAGGAGGTCTATGTATGATCCTCCAATGTCTTTCTTGAGTCTATAACTGAACTTCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E242912" ref_strand="+" ref_description="SGN-E242912 [cLED-31-K14]">
      <seq>catcaatactcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataaaattggctactttatgttcttctagaactctaatgcagtttttctccgggttagctgtaacttttgtgatggaaacatatgtcctcttctgtgatggaggtctatgtatgatcctccagtgtctttcttgagtctataactgaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80246" stop="77957"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79946" g_stop="79917" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="155" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="268" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78257" g_length="335"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="603" r_length="335" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E242912" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>603</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E242912" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79946" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78257"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAAC</genome_strand>
        <mrna_strand>CATCAATACTCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E243545" ref_strand="+" ref_description="SGN-E243545 [cLED-34-E11]">
      <seq>catcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataaaattggctactttatgttcttctagaactctaatgcagtttttctccgggttagctgtaacttttgtgatggaaacatatgtcctcttctgtgatggaggtctatgtatgatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80246" stop="77988"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79946" g_stop="79917" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="155" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="268" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78288" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="572" r_length="304" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E243545" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>572</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E243545" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79946" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78288"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCC</genome_strand>
        <mrna_strand>CATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E240060" ref_strand="+" ref_description="SGN-E240060 [cLED-32-D2]">
      <seq>catcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataaaattggctactttatgttcttctagaactctaatgcagtttttctccgggttagctgtaacttttgtgatggaaacatatgtcctcttctgtgatggaggtctatgtatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80246" stop="77990"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79946" g_stop="79917" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="155" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="268" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78290" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="570" r_length="302" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E240060" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E240060" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79946" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78290"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGAT</genome_strand>
        <mrna_strand>CATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E243444" ref_strand="+" ref_description="SGN-E243444 [cLED-34-I12]">
      <seq>tgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgggttaaataaactggcaagccgtgtcttcaataagctgataaaattggctactttatgttcttctagaactctaatgcagtttttctccgggttagctgtaacttttgtgatggaaacatatgtcctcttctgtgatggaggtctatgtatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="79102" stop="77992"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78802" g_stop="78703" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="100" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="78591" g_stop="78292" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="400" r_length="300" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E243444" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>400</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E243444" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78802" e_stop="78703"/>
          <exon e_start="78591" e_stop="78292"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATG</genome_strand>
        <mrna_strand>TGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGGGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E552235" ref_strand="+" ref_description="SGN-E552235 [cTSB-3-E19]">
      <seq>agcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataaaattggctactttatgttcttctagaactctaatgcattttttctccgggttaactgtaacttttgggatggaaacatatgtcctctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80585" stop="78014"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80285" g_stop="79917" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="369" r_length="369" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="370" r_stop="494" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="495" r_stop="607" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78314" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="608" r_stop="885" r_length="278" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E552235" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>885</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E552235" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80285" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78314"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTT</genome_strand>
        <mrna_strand>AGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCATTTTTTCTCCGGGTTAACTGTAACTTTTGGGATGGAAACATATGTCCTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E708489" ref_strand="+" ref_description="SGN-E708489 [FA35DF06]">
      <seq>cagctgaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataaaattggctactttatgttcttctagaactctaatgcagtttttctccggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80585" stop="78052"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80286" g_stop="79917" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="370" r_length="370" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="371" r_stop="495" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="608" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78352" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="609" r_stop="848" r_length="240" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E708489" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>848</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E708489" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80286" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78352"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGG</genome_strand>
        <mrna_strand>CAGCTGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E276295" ref_strand="+" ref_description="SGN-E276295 [cLEN-21-M6]">
      <seq>aaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtctttaataagctgataaaattggctactttatgttcttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80433" stop="78079"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80133" g_stop="79917" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="217" r_length="217" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="342" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="455" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78379" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="668" r_length="213" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E276295" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>668</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E276295" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80133" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78379"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCT</genome_strand>
        <mrna_strand>AAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTTAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E242655" ref_strand="+" ref_description="SGN-E242655 [cLED-30-B11]">
      <seq>catcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataaaattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80246" stop="78097"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79946" g_stop="79917" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="155" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="268" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78397" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="463" r_length="195" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E242655" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>463</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E242655" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79946" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78397"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTG</genome_strand>
        <mrna_strand>CATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E268988" ref_strand="+" ref_description="SGN-E268988 [cLEI-16-E2]">
      <seq>gctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaaaggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80353" stop="78099"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80054" g_stop="79917" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="138" r_length="138" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="263" r_length="125" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="376" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78399" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="569" r_length="193" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E268988" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E268988" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80054" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78399"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAAT</genome_strand>
        <mrna_strand>GCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAAGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E311228" ref_strand="+" ref_description="SGN-E311228 [cLEZ-16-B3]">
      <seq>tggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80473" stop="78140"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80173" g_stop="79917" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="257" r_length="257" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="382" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="495" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78440" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="647" r_length="152" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E311228" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E311228" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80173" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78440"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTT</genome_strand>
        <mrna_strand>TGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E276289" ref_strand="+" ref_description="SGN-E276289 [cLEN-21-K6]">
      <seq>aaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80433" stop="78161"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80133" g_stop="79917" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="217" r_length="217" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="342" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="455" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78461" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="586" r_length="131" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E276289" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E276289" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80133" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78461"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAG</genome_strand>
        <mrna_strand>AAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E242080" ref_strand="+" ref_description="SGN-E242080 [cLED-37-A19]">
      <seq>catcaatactcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcgaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagccgttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtataga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80246" stop="78162"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79946" g_stop="79917" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="0.768" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="155" r_length="125" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="0.98"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="268" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78462" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="398" r_length="130" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E242080" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>398</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E242080" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79946" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78462"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGA</genome_strand>
        <mrna_strand>CATCAATACTCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCGAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCCGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E553296" ref_strand="+" ref_description="SGN-E553296 [cTSB-4-E19]">
      <seq>aaaaaaagtcactggaaagcaatactgtctcaattgcaaaaaatgaactgatgcaaatcttaattcttgtgcgaaatttcttacctggacatcatcaggttatcaatggaggagtggaatgttgctgcaattgcacacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80582" stop="78167"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80285" g_stop="79917" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="371" r_length="371" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="496" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="497" r_stop="609" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78467" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="610" r_stop="734" r_length="125" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E553296" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>732</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E553296" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80285" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78467"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAGAGGTCACTGGA-AGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGG-GGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGT</genome_strand>
        <mrna_strand>AAAAAAAGTCACTGGAAAGCAATACTGTCTCAATTGCAAAAAATGAACTGATGCAAATCTTAATTCTTGTGCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGAGGAGTGGAATGTTGCTGCAATTGCACACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E258539" ref_strand="+" ref_description="SGN-E258539 [cLEG-47-B15]">
      <seq>tggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaatacattgtncaagatggggaattggcacctcagtatcgctaaattatttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80597" stop="78169"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80297" g_stop="79917" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="381" r_length="381" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="506" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="507" r_stop="619" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78469" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="620" r_stop="741" r_length="122" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E258539" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>742</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E258539" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80297" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78469"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTAT</genome_strand>
        <mrna_strand>TGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAA-TACATTGTNCAAGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E238057" ref_strand="+" ref_description="SGN-E238057 [cLED-22-C19]">
      <seq>atcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaaaggagttctaattgtaaacaatgctcgaggagcaattatggacactcaatcagctgttgatgcttgtaacatcggtcatattgcaagatacagtggagatgtttggcacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80245" stop="78191"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79945" g_stop="79917" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="29" r_length="29" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="0.768" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="154" r_length="125" r_score="0.960"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="0.92"/>
            <acceptor a_prob="0.964" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="267" r_length="113" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78491" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="368" r_length="101" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E238057" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>368</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E238057" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79945" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78491"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACC</genome_strand>
        <mrna_strand>ATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAAGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAATCAGCTGTTGATGCTTGTAACATCGGTCATATTGCAA...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGCACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E240970" ref_strand="+" ref_description="SGN-E240970 [cLED-24-F15]">
      <seq>catcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcatgatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80246" stop="78198"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79946" g_stop="79917" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="155" r_length="125" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="0.98"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="268" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78498" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="362" r_length="94" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E240970" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>362</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E240970" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79946" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78498"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAAT</genome_strand>
        <mrna_strand>CATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAT...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E233270" ref_strand="+" ref_description="SGN-E233270 [cLED-6-J13]">
      <seq>tgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80543" stop="78247"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80243" g_stop="79917" g_length="327"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="327" r_length="327" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="452" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="453" r_stop="565" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78547" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="566" r_stop="610" r_length="45" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E233270" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E233270" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80243" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78547"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTC</genome_strand>
        <mrna_strand>TGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E265006" ref_strand="+" ref_description="SGN-E265006 [cLEI-10-P11]">
      <seq>gggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80478" stop="78256"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80178" g_stop="79917" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="262" r_length="262" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="387" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="500" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78556" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="501" r_stop="536" r_length="36" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E265006" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265006" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80178" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78556"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGAC</genome_strand>
        <mrna_strand>GGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E336433" ref_strand="+" ref_description="SGN-E336433 [cTOE-4-O7]">
      <seq>ttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80421" stop="78256"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80121" g_stop="79917" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="205" r_length="205" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="330" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="443" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78556" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="479" r_length="36" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E336433" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E336433" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80121" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78556"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGAC</genome_strand>
        <mrna_strand>TTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E332612" ref_strand="+" ref_description="SGN-E332612 [cTOD-18-D19]">
      <seq>tcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaagatatgttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80694" stop="78258"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80394" g_stop="79917" g_length="478"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="478" r_length="478" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="479" r_stop="603" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="604" r_stop="716" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78558" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="717" r_stop="749" r_length="33" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E332612" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>750</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E332612" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80394" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78558"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGG</genome_strand>
        <mrna_strand>TCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAA-GATATGTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E261870" ref_strand="+" ref_description="SGN-E261870 [cLEG-61-P13]">
      <seq>aaggcaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtgggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80674" stop="78258"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80374" g_stop="79917" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="457" r_length="457" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="582" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="583" r_stop="696" r_length="114" r_score="0.982"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78558" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="697" r_stop="730" r_length="34" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E261870" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>730</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E261870" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80374" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78558"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGT-GGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGG</genome_strand>
        <mrna_strand>AAGGC-AAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E710244" ref_strand="+" ref_description="SGN-E710244 [FA54DB04]">
      <seq>aatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggcacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80531" stop="78258"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80231" g_stop="79917" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="315" r_length="315" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="440" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="553" r_length="113" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78591" g_stop="78558" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="554" r_stop="587" r_length="34" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E710244" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>587</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E710244" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80231" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78558"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGG</genome_strand>
        <mrna_strand>AATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGCACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E261013" ref_strand="+" ref_description="SGN-E261013 [cLEG-55-E18]">
      <seq>cctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggnagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaacccagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="81525" stop="78385"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81225" g_stop="81201" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80457" g_stop="79917" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="566" r_length="541" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="567" r_stop="691" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78815" g_stop="78703" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="692" r_stop="805" r_length="114" r_score="0.973"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="78591" g_stop="78573" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="806" r_stop="824" r_length="19" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E261013" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>823</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E261013" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81225" e_stop="81201"/>
          <exon e_start="80457" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78703"/>
          <exon e_start="78591" e_stop="78573"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGG-AGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAA</genome_strand>
        <mrna_strand>CCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGNAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCCAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E261438" ref_strand="+" ref_description="SGN-E261438 [cLEG-57-B24]">
      <seq>cgagactagttctctcaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtgggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="81532" stop="78408"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81236" g_stop="81201" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="35" r_length="35" r_score="0.750"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80457" g_stop="79917" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="576" r_length="541" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="577" r_stop="701" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78815" g_stop="78709" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="702" r_stop="809" r_length="108" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E261438" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>809</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E261438" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81236" e_stop="81201"/>
          <exon e_start="80457" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78709"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGT-GGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGAT</genome_strand>
        <mrna_strand>CGAGACT-AGTTCTCTCAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E260604" ref_strand="+" ref_description="SGN-E260604 [cLEG-54-N16]">
      <seq>attgacagtatcagacgtcactgtaagcaatactgtctcagttgcggaagtatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcagggtatctatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatctaattggagcaaagtttgaggaagatctcgataagatgctctctaaatgtgacatattggtcatcaatacgcctcttacagagaaaacaaaacgaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgctgatgcttgtaacagcggtcatattgcacgatacagtggagatgtttggtacccacaaccatctcccaaggaccttttatggcgttacatgcccaaccaagctatgactcctcacattttctgggactacaattgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80594" stop="78409"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80294" g_stop="79917" g_length="378"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="379" r_length="379" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.768" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="380" r_stop="504" r_length="125" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="0.96"/>
            <acceptor a_prob="0.964" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78709" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="612" r_length="108" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E260604" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E260604" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80294" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78709"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAG-ATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACA-TTTCTGGGACTACCATTGAT</genome_strand>
        <mrna_strand>ATTGACAGTATCAGACGTCACTGTAAGCAATACTGTCTCAGTTGCGGAAGTATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGGTATCTATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCTAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCTAAATGTGACATATTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGCTGATGCTTGTAACAGCGGTCATATTGCAC...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCATCTCCCAAGGACCTTTTATGGCGTTACATGCCCAACCAAGCTATGACTCCTCACATTTTCTGGGACTACAATTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E228246" ref_strand="+" ref_description="SGN-E228246 [cLED-2-N13]">
      <seq>ttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80506" stop="78428"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80206" g_stop="79917" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="290" r_length="290" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="415" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78728" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="416" r_stop="503" r_length="88" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E228246" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E228246" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80206" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78728"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACAT</genome_strand>
        <mrna_strand>TTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E235775" ref_strand="+" ref_description="SGN-E235775 [cLED-15-M17]">
      <seq>tgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80543" stop="78437"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80243" g_stop="79917" g_length="327"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="327" r_length="327" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="452" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78737" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="453" r_stop="531" r_length="79" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E235775" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E235775" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80243" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78737"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGAC</genome_strand>
        <mrna_strand>TGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E289438" ref_strand="+" ref_description="SGN-E289438 [cLET-3-L17]">
      <seq>gcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80534" stop="78487"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80234" g_stop="79917" g_length="318"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="318" r_length="318" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="443" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78787" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="472" r_length="29" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E289438" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E289438" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80234" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78787"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAA</genome_strand>
        <mrna_strand>GCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E233512" ref_strand="+" ref_description="SGN-E233512 [cLED-9-A2]">
      <seq>catcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80246" stop="78488"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79946" g_stop="79917" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="155" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78788" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="183" r_length="28" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E233512" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>183</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E233512" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79946" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78788"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACA</genome_strand>
        <mrna_strand>CATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E240658" ref_strand="+" ref_description="SGN-E240658 [cLED-21-E21]">
      <seq>tgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtaccca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80543" stop="78490"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80243" g_stop="79917" g_length="327"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="327" r_length="327" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79051" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="452" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78815" g_stop="78790" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="453" r_stop="478" r_length="26" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E240658" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E240658" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80243" e_stop="79917"/>
          <exon e_start="79175" e_stop="79051"/>
          <exon e_start="78815" e_stop="78790"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCA</genome_strand>
        <mrna_strand>TGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E262678" ref_strand="+" ref_description="SGN-E262678 [cLEG-63-I1]">
      <seq>tgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggtattttaacataacttgaacacatcatccagagatgagccctcagccttaatatcaattgaacacaccattatatttttttcttcaattcttgcttgtttcttttcttcaatatattttatcgacatttgggaggtagttccatatcttgtgggattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80373" stop="78593"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80073" g_stop="79917" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="157" r_length="157" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="78893" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="441" r_length="284" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E262678" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>440</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E262678" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80073" e_stop="79917"/>
          <exon e_start="79175" e_stop="78893"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTT-GGAAGTAGTTCCATATCTTGTGGAATTG</genome_strand>
        <mrna_strand>TGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGGAGGTAGTTCCATATCTTGTGGGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E239621" ref_strand="+" ref_description="SGN-E239621 [cLED-23-F16]">
      <seq>caacttgtgttgccagaataatatgattgccaatggagtatttttaagattcttggagatgtaagagttgtttctgtccatacatcactcttctcatgtcactaaggtcattgattgtttccatgtgctatatcgcaaattgctcacaattttaactatgtgatccagaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggtattttaacataacttgaacacatcatccagagatgagccctcagccttaatatcaattgaacacaccattatatttttttcttcaattcttgcttggttcttttcttcaatatattttatcgacatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="79643" stop="78622"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79343" g_stop="78922" g_length="422"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="422" r_length="422" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E239621" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>422</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E239621" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79343" e_stop="78922"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATT</genome_strand>
        <mrna_strand>CAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGGTTCTTTTCTTCAATATATTTTATCGACATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E346379" ref_strand="+" ref_description="SGN-E346379 [cTOF-23-A6]">
      <seq>taaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="81550" stop="78754"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81250" g_stop="81201" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80457" g_stop="79917" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="591" r_length="541" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="79175" g_stop="79054" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="592" r_stop="713" r_length="122" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E346379" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E346379" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81250" e_stop="81201"/>
          <exon e_start="80457" e_stop="79917"/>
          <exon e_start="79175" e_stop="79054"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTG</genome_strand>
        <mrna_strand>TAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E247482" ref_strand="+" ref_description="SGN-E247482 [cLEF-42-A11]">
      <seq>ggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactctaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaaacagttgttgatgcttgtaacagcggtcatattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80419" stop="78754"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80119" g_stop="79917" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="203" r_length="203" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79054" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="204" r_stop="325" r_length="122" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E247482" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>325</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E247482" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80119" e_stop="79917"/>
          <exon e_start="79175" e_stop="79054"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTG</genome_strand>
        <mrna_strand>GGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTCTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAACAGTTGTTGATGCTTGTAACAGCGGTCATATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E239661" ref_strand="+" ref_description="SGN-E239661 [cLED-33-G15]">
      <seq>tgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80543" stop="78773"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80243" g_stop="79917" g_length="327"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="327" r_length="327" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79073" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="430" r_length="103" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E239661" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>430</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E239661" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80243" e_stop="79917"/>
          <exon e_start="79175" e_stop="79073"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCT</genome_strand>
        <mrna_strand>TGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E240506" ref_strand="+" ref_description="SGN-E240506 [cLED-21-J24]">
      <seq>ttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80506" stop="78809"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80206" g_stop="79917" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="290" r_length="290" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79109" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="357" r_length="67" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E240506" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>357</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E240506" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80206" e_stop="79917"/>
          <exon e_start="79175" e_stop="79109"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGA</genome_strand>
        <mrna_strand>TTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E242830" ref_strand="+" ref_description="SGN-E242830 [cLED-31-F10]">
      <seq>tgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcangacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacncctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80543" stop="78813"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80243" g_stop="79917" g_length="327"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="327" r_length="327" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79113" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="390" r_length="63" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E242830" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>390</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E242830" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80243" e_stop="79917"/>
          <exon e_start="79175" e_stop="79113"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGC</genome_strand>
        <mrna_strand>TGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCANGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACNCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E220993" ref_strand="+" ref_description="SGN-E220993 [cLEL-22-I5](-)">
      <seq>cttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagctgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80656" stop="78815"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80356" g_stop="79917" g_length="440"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="440" r_length="440" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79115" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="501" r_length="61" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E220993" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E220993" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80356" e_stop="79917"/>
          <exon e_start="79175" e_stop="79115"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAAT</genome_strand>
        <mrna_strand>CTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGCTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E235196" ref_strand="+" ref_description="SGN-E235196 [cLEL-6-F23](-)">
      <seq>gctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80644" stop="78815"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80344" g_stop="79917" g_length="428"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="428" r_length="428" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79115" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="489" r_length="61" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E235196" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E235196" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80344" e_stop="79917"/>
          <exon e_start="79175" e_stop="79115"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAAT</genome_strand>
        <mrna_strand>GCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E234283" ref_strand="+" ref_description="SGN-E234283 [cLEL-8-H20](-)">
      <seq>ctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80610" stop="78815"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80310" g_stop="79917" g_length="394"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="394" r_length="394" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79115" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="455" r_length="61" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E234283" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>455</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E234283" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80310" e_stop="79917"/>
          <exon e_start="79175" e_stop="79115"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAAT</genome_strand>
        <mrna_strand>CTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E234524" ref_strand="+" ref_description="SGN-E234524 [cLEL-6-F23](-)">
      <seq>agtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80588" stop="78815"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80288" g_stop="79917" g_length="372"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="372" r_length="372" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79115" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="433" r_length="61" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E234524" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E234524" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80288" e_stop="79917"/>
          <exon e_start="79175" e_stop="79115"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAAT</genome_strand>
        <mrna_strand>AGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E234038" ref_strand="+" ref_description="SGN-E234038 [cLEL-8-H20](-)">
      <seq>tccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80517" stop="78815"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80217" g_stop="79917" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="301" r_length="301" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79115" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="362" r_length="61" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E234038" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>362</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E234038" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80217" e_stop="79917"/>
          <exon e_start="79175" e_stop="79115"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAAT</genome_strand>
        <mrna_strand>TCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E703103" ref_strand="+" ref_description="SGN-E703103 [FA20CC07]">
      <seq>gtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaaacaaaagaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82978" stop="78822"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82678" g_stop="82533" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="145" r_length="145" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="317" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="79917" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="858" r_length="541" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.768" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79175" g_stop="79122" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="859" r_stop="912" r_length="54" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E703103" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>913</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703103" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82678" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="79917"/>
          <exon e_start="79175" e_stop="79122"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGT</genome_strand>
        <mrna_strand>GTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCC-AAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAAACAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E323451" ref_strand="+" ref_description="SGN-E323451 [cTOC-7-K20]">
      <seq>tggaattggatcagatcatgttgatctgaaagctgctggtgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80642" stop="78845"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80342" g_stop="79917" g_length="426"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="426" r_length="426" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79175" g_stop="79145" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="457" r_length="31" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E323451" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>457</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E323451" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80342" e_stop="79917"/>
          <exon e_start="79175" e_stop="79145"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAG</genome_strand>
        <mrna_strand>TGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGGTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E702568" ref_strand="+" ref_description="SGN-E702568 [FA19AD05]">
      <seq>ggagtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82981" stop="79608"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82681" g_stop="82533" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="321" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="79917" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="862" r_length="541" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E702568" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>862</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E702568" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82681" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="79917"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA</genome_strand>
        <mrna_strand>GGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E698063" ref_strand="+" ref_description="SGN-E698063 [FA05AF02]">
      <seq>cgtatacacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttagtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataaaatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82949" stop="79613"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82656" g_stop="82533" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="296" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="79917" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="837" r_length="541" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E698063" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>837</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E698063" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82656" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="79917"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA</genome_strand>
        <mrna_strand>CGTATACACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTAGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAAATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E325520" ref_strand="+" ref_description="SGN-E325520 [cTOC-15-E23]">
      <seq>tctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagcttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaagaggaatgtttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="81638" stop="79608"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81338" g_stop="81201" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="138" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80457" g_stop="79917" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="679" r_length="541" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E325520" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>679</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E325520" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81338" e_stop="81201"/>
          <exon e_start="80457" e_stop="79917"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA</genome_strand>
        <mrna_strand>TCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGCTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E314767" ref_strand="+" ref_description="SGN-E314767 [cTOA-20-O4]">
      <seq>ttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgantagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggatgtttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="81558" stop="79608"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81258" g_stop="81201" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80457" g_stop="79917" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="599" r_length="541" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E314767" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>599</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E314767" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81258" e_stop="81201"/>
          <exon e_start="80457" e_stop="79917"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA</genome_strand>
        <mrna_strand>TTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGANTAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E258818" ref_strand="+" ref_description="SGN-E258818 [cLEG-50-H8]">
      <seq>aaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80674" stop="79617"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80374" g_stop="79917" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="458" r_length="458" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E258818" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>458</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E258818" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80374" e_stop="79917"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA</genome_strand>
        <mrna_strand>AAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E705509" ref_strand="+" ref_description="SGN-E705509 [FA27BD10]">
      <seq>gtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82962" stop="79618"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82662" g_stop="82533" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="130" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="302" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="79918" g_length="540"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="842" r_length="540" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E705509" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>842</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E705509" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82662" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="79918"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAA</genome_strand>
        <mrna_strand>GTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E255533" ref_strand="+" ref_description="SGN-E255533 [cLEG-30-B22]">
      <seq>cctgacaaagaaggaccatattgttagcttgagaaacacattcctgaggggcaggtgttgatttcaaccccttttcctcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcatagtttgaggaagatctcgataagatgctctcgaaatgtgacata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="81525" stop="79652"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81225" g_stop="81201" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="0.920"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.987" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80457" g_stop="79952" g_length="506"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="531" r_length="506" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E255533" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E255533" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81225" e_stop="81201"/>
          <exon e_start="80457" e_stop="79952"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATA</genome_strand>
        <mrna_strand>CCTGACAAAGAAGGACCATATTGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGAGGGGCAGGTGTTGATTTCAACCCCTTTTCCTCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCATAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E703584" ref_strand="+" ref_description="SGN-E703584 [FA21DF06]">
      <seq>agtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82979" stop="79655"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82679" g_stop="82533" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="147" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="319" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="79955" g_length="503"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="822" r_length="503" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E703584" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>822</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703584" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82679" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="79955"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGAC</genome_strand>
        <mrna_strand>AGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E206669" ref_strand="+" ref_description="SGN-E206669 [cLEC-31-L12]">
      <seq>gaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80675" stop="79662"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80375" g_stop="79962" g_length="414"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="414" r_length="414" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E206669" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>414</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E206669" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80375" e_stop="79962"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAA</genome_strand>
        <mrna_strand>GAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E293660" ref_strand="+" ref_description="SGN-E293660 [cLET-21-G5]">
      <seq>agattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="81653" stop="79668"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81353" g_stop="81201" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="153" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80457" g_stop="79968" g_length="490"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="643" r_length="490" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E293660" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>643</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E293660" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81353" e_stop="81201"/>
          <exon e_start="80457" e_stop="79968"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCT</genome_strand>
        <mrna_strand>AGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E720468" ref_strand="+" ref_description="SGN-E720468 [FC10DF04]">
      <seq>ggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcataggtcactggaagcaatactgtctcagttgcggaagatgaactgatgccaatcttaattcttgtccgaaataacttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80635" stop="79688"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80335" g_stop="79988" g_length="348"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="348" r_length="348" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E720468" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>348</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E720468" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80335" e_stop="79988"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAG</genome_strand>
        <mrna_strand>GGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCATAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCCAATCTTAATTCTTGTCCGAAATAACTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E228090" ref_strand="+" ref_description="SGN-E228090 [cLED-2-J1]">
      <seq>ggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttattcttgtccgaaattcttacctggcatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="81560" stop="79694"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81260" g_stop="81201" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80457" g_stop="79994" g_length="464"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="521" r_length="461" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E228090" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>524</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E228090" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81260" e_stop="81201"/>
          <exon e_start="80457" e_stop="79994"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAG</genome_strand>
        <mrna_strand>GGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTT-ATTCTTGTCCGAAA-TTCTTACCTGG-CATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E241220" ref_strand="+" ref_description="SGN-E241220 [cLED-26-O5]">
      <seq>ttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="81576" stop="79699"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81276" g_stop="81201" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80457" g_stop="79999" g_length="459"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="535" r_length="459" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E241220" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E241220" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81276" e_stop="81201"/>
          <exon e_start="80457" e_stop="79999"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAG</genome_strand>
        <mrna_strand>TTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E241284" ref_strand="+" ref_description="SGN-E241284 [cLED-26-J19]">
      <seq>ggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="81560" stop="79699"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81260" g_stop="81201" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80457" g_stop="79999" g_length="459"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="519" r_length="459" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E241284" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E241284" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81260" e_stop="81201"/>
          <exon e_start="80457" e_stop="79999"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAG</genome_strand>
        <mrna_strand>GGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E317754" ref_strand="+" ref_description="SGN-E317754 [cTOA-30-M11]">
      <seq>tctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatgggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattggagccatttaactggtatctactttaccatgaccgtctttagatggattctgagctagagatcaaattgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82965" stop="79700"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82665" g_stop="82533" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="133" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="305" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80000" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="763" r_length="458" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E317754" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E317754" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82665" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80000"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAAT-GGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGA</genome_strand>
        <mrna_strand>TCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGGAGCCATTTAACTGGTATCTACTTTACCATGACCGTCTTTAGATGGATTCTGAGCTAGAG-ATCAAATTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E231718" ref_strand="+" ref_description="SGN-E231718 [cLED-4-L17]">
      <seq>ggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="81560" stop="79708"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81260" g_stop="81201" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80457" g_stop="80008" g_length="450"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="510" r_length="450" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E231718" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>510</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E231718" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81260" e_stop="81201"/>
          <exon e_start="80457" e_stop="80008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATC</genome_strand>
        <mrna_strand>GGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E213527" ref_strand="+" ref_description="SGN-E213527 [cLEC-71-M23]">
      <seq>ggagtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82981" stop="79716"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82681" g_stop="82533" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="321" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80016" g_length="442"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="763" r_length="442" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E213527" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E213527" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82681" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80016"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCT</genome_strand>
        <mrna_strand>GGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E704572" ref_strand="+" ref_description="SGN-E704572 [FA24CF08]">
      <seq>gtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccctttaactgtaatctactttaccatgaccgtcttaagatggattctgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82978" stop="79718"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82678" g_stop="82533" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="146" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="318" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80018" g_length="440"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="758" r_length="440" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E704572" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>758</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E704572" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82678" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80018"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAG</genome_strand>
        <mrna_strand>GTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCCTTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E721018" ref_strand="+" ref_description="SGN-E721018 [FC12CB04]">
      <seq>gggagttgaagcaggtcgcttctaagtactgggccttcgccctttcctataaaaagccgttacgtctctccagtaagtcatctcagccaactggagtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccaaattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcaaatcatgttgatctgaaagctgctgctgctgctggattgacagtagcaaaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcaaacttttactccagcgattgaaaccatttaactgtaatctactttaccatgaccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="83072" stop="79737"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82773" g_stop="82533" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="241" r_length="241" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="413" r_length="172" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80037" g_length="421"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="834" r_length="421" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E721018" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>834</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E721018" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82773" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80037"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGTTGAAGCAGGTCGCTTCTAAGTACTGGGCCTTCGCCCTTTCCTATAAAAAGCCGTTACGTCTCTCCAGTAAGTCATCTCAGCCAACTGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCG</genome_strand>
        <mrna_strand>GGGAGTTGAAGCAGGTCGCTTCTAAGTACTGGGCCTTCGCCCTTTCCTATAAAAAGCCGTTACGTCTCTCCAGTAAGTCATCTCAGCCAACTGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAAATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAAATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAAAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAAACTTTTACTCCAGCGATTGAAACCATTTAACTGTAATCTACTTTACCATGACCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E243633" ref_strand="+" ref_description="SGN-E243633 [cLED-34-H7]">
      <seq>gaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="81564" stop="79738"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81264" g_stop="81201" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="64" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80457" g_stop="80038" g_length="420"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="484" r_length="420" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E243633" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E243633" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81264" e_stop="81201"/>
          <exon e_start="80457" e_stop="80038"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACC</genome_strand>
        <mrna_strand>GAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E329089" ref_strand="+" ref_description="SGN-E329089 [cTOC-24-N9]">
      <seq>ccctttcctataaaaagccgttacgtctctccagtaagtcatctcagccaactggagtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaaagcatttaactgtaatctactttacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="83034" stop="79743"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82734" g_stop="82533" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="202" r_length="202" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="203" r_stop="374" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80043" g_length="415"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="789" r_length="415" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E329089" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>789</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E329089" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82734" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80043"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTTTCCTATAAAAAGCCGTTACGTCTCTCCAGTAAGTCATCTCAGCCAACTGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCA</genome_strand>
        <mrna_strand>CCCTTTCCTATAAAAAGCCGTTACGTCTCTCCAGTAAGTCATCTCAGCCAACTGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAAGCATTTAACTGTAATCTACTTTACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E325679" ref_strand="+" ref_description="SGN-E325679 [cTOC-15-E24]">
      <seq>ttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcataaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagatacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttctaccccttttcatcctgcctatgtcacggctgaaaggatcgataaggcgaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtatcagaggtcactggaagcgatactgtctcacttgcggaatatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggatatcaatggggagtggaatgttgctgcaattgcgcacatagcttatgagttggaatgcaagactgctggaactgttggtgcgagacgtattggcagacttttactccagcgaatgcagccatttaactggaatctactttacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="81641" stop="79744"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81341" g_stop="81201" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="142" r_length="142" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80457" g_stop="80044" g_length="414"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="556" r_length="414" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E325679" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E325679" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81341" e_stop="81201"/>
          <exon e_start="80457" e_stop="80044"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAG-TACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACC</genome_strand>
        <mrna_strand>TTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCATAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGATACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCTACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCGATAAGGCGAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTATCAGAGGTCACTGGAAGCGATACTGTCTCACTTGCGGAATATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGATATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACATAGCTTATGAGTTGGAATGCAAGACTGCTGGAACTGTTGGTGCGAGACGTATTGGCAGACTTTTACTCCAGCGAATGCAGCCATTTAACTGGAATCTACTTTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E315304" ref_strand="+" ref_description="SGN-E315304 [cTOA-24-F3]">
      <seq>gtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaagggcagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82962" stop="79747"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82662" g_stop="82533" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="130" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="302" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80045" g_length="413"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="715" r_length="413" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E315304" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E315304" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82662" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80045"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTAC</genome_strand>
        <mrna_strand>GTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGGCAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E213161" ref_strand="+" ref_description="SGN-E213161 [cLEC-72-G14]">
      <seq>ttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82970" stop="79749"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82670" g_stop="82533" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="138" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="310" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80049" g_length="409"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="719" r_length="409" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E213161" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>719</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E213161" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82670" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80049"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACT</genome_strand>
        <mrna_strand>TTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E721102" ref_strand="+" ref_description="SGN-E721102 [FC12DB05]">
      <seq>gcggccaaatcggccgaattgggagttgaagcaggtcgcttctaagtactgggccttcgccctttcctataaaaagccgttacgtctctccagtaagtcatctcagccaactggagtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="83076" stop="79798"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82759" g_stop="82533" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="261" r_length="227" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="433" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80098" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="793" r_length="360" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E721102" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>759</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E721102" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82759" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80098"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCGCTTCTAAGTACTGGGCCTTCGCCCTTTCCTATAAAAAGCCGTTACGTCTCTCCAGTAAGTCATCTCAGCCAACTGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTA</genome_strand>
        <mrna_strand>GTCGCTTCTAAGTACTGGGCCTTCGCCCTTTCCTATAAAAAGCCGTTACGTCTCTCCAGTAAGTCATCTCAGCCAACTGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E281856" ref_strand="+" ref_description="SGN-E281856 [cLES-2-G10]">
      <seq>tttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="81600" stop="79813"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81300" g_stop="81201" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="100" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80457" g_stop="80113" g_length="345"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="445" r_length="345" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E281856" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>445</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E281856" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81300" e_stop="81201"/>
          <exon e_start="80457" e_stop="80113"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTG</genome_strand>
        <mrna_strand>TTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E240660" ref_strand="+" ref_description="SGN-E240660 [cLED-21-G9]">
      <seq>tgaaattatccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="81616" stop="79814"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81316" g_stop="81201" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80457" g_stop="80114" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="460" r_length="344" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E240660" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>460</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E240660" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81316" e_stop="81201"/>
          <exon e_start="80457" e_stop="80114"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACT</genome_strand>
        <mrna_strand>TGAAATTATCCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E341514" ref_strand="+" ref_description="SGN-E341514 [cTOE-23-C11]">
      <seq>tggagtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82982" stop="79833"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82682" g_stop="82533" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="150" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="322" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80133" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="647" r_length="325" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E341514" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E341514" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82682" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80133"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGA</genome_strand>
        <mrna_strand>TGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E276583" ref_strand="+" ref_description="SGN-E276583 [cLEN-17-L17]">
      <seq>cgaaacccttttctgtaaatccaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82948" stop="79833"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82648" g_stop="82533" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="287" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80133" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="612" r_length="325" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E276583" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E276583" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82648" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80133"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGA</genome_strand>
        <mrna_strand>CGAAACCCTTTTCTGTAAATCC-AAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E212938" ref_strand="+" ref_description="SGN-E212938 [cLEC-73-N14]">
      <seq>agcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82896" stop="79833"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82596" g_stop="82533" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="64" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="236" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80133" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="561" r_length="325" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E212938" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>561</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E212938" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82596" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80133"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGA</genome_strand>
        <mrna_strand>AGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E327943" ref_strand="+" ref_description="SGN-E327943 [cTOC-22-L13]">
      <seq>tttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatgggggagtggaatgttgctgcaattgcgcacagagcttatgatttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82977" stop="79834"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82677" g_stop="82533" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="145" r_length="145" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="317" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80134" g_length="324"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="642" r_length="325" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E327943" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>641</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E327943" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82677" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80134"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAAT-GGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGG</genome_strand>
        <mrna_strand>TTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E202311" ref_strand="+" ref_description="SGN-E202311 [cLEC-6-K18]">
      <seq>ggagtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82981" stop="79835"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82681" g_stop="82533" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="321" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80135" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="644" r_length="323" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E202311" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>644</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E202311" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82681" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80135"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTG</genome_strand>
        <mrna_strand>GGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E249551" ref_strand="+" ref_description="SGN-E249551 [cLEF-56-F8]">
      <seq>ttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82976" stop="79835"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82676" g_stop="82533" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="316" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80135" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="639" r_length="323" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E249551" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E249551" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82676" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80135"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTG</genome_strand>
        <mrna_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E248368" ref_strand="+" ref_description="SGN-E248368 [cLEG-1-G9]">
      <seq>ttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82976" stop="79838"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82676" g_stop="82533" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="316" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80138" g_length="320"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="636" r_length="320" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E248368" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>636</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E248368" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82676" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80138"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGAT</genome_strand>
        <mrna_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E337024" ref_strand="+" ref_description="SGN-E337024 [cTOE-20-P7]">
      <seq>ttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82940" stop="79839"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82640" g_stop="82533" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="108" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="280" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80139" g_length="319"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="599" r_length="319" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E337024" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>599</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E337024" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82640" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80139"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGA</genome_strand>
        <mrna_strand>TTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E261763" ref_strand="+" ref_description="SGN-E261763 [cLEG-61-P14]">
      <seq>caaaaaatctacaacttctgctgacagctggaattggatctgatcatgttgatctgaaagctgctgctgctgctggattgacagtagcactaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgccattgggcacagaactta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80670" stop="79842"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80370" g_stop="80142" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="230" r_length="230" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E261763" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>229</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E261763" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80370" e_stop="80142"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCA-GAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTA</genome_strand>
        <mrna_strand>CAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCTGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCACTAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCCATTGGGCACAGAACTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E265856" ref_strand="+" ref_description="SGN-E265856 [cLEI-11-O6]">
      <seq>gtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacattatcaggttatcaatggggagtggaatgttgctgcaattgcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82898" stop="79853"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82598" g_stop="82533" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="238" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80153" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="543" r_length="305" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E265856" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265856" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82598" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80153"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCG</genome_strand>
        <mrna_strand>GTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATTATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E336779" ref_strand="+" ref_description="SGN-E336779 [cTOE-5-G21]">
      <seq>ttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaagttatcaatggggagtggaatgttgctgcaattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82970" stop="79855"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82670" g_stop="82533" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="138" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="310" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80155" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="613" r_length="303" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E336779" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E336779" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82670" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80155"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTG</genome_strand>
        <mrna_strand>TTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAAGTTATCAATGGGGAGTGGAATGTTGCTGCAATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E325457" ref_strand="+" ref_description="SGN-E325457 [cTOC-1-P19]">
      <seq>tccaaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82929" stop="79862"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82629" g_stop="82533" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="270" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80162" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="566" r_length="296" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E325457" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>565</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E325457" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82629" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80162"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCC-AAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCT</genome_strand>
        <mrna_strand>TCCAAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E228091" ref_strand="+" ref_description="SGN-E228091 [cLED-2-J3]">
      <seq>ggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="81560" stop="79874"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81260" g_stop="81201" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80457" g_stop="80174" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="344" r_length="284" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E228091" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>344</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E228091" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81260" e_stop="81201"/>
          <exon e_start="80457" e_stop="80174"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAG</genome_strand>
        <mrna_strand>GGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E286185" ref_strand="+" ref_description="SGN-E286185 [cLES-11-E7]">
      <seq>tcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="81530" stop="79874"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81230" g_stop="81201" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80457" g_stop="80174" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="314" r_length="284" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E286185" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>314</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E286185" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81230" e_stop="81201"/>
          <exon e_start="80457" e_stop="80174"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAG</genome_strand>
        <mrna_strand>TCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E212414" ref_strand="+" ref_description="SGN-E212414 [cLEC-74-L5]">
      <seq>ttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82976" stop="79880"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82676" g_stop="82533" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="316" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80180" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="594" r_length="278" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E212414" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>594</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E212414" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82676" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80180"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAAT</genome_strand>
        <mrna_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E213170" ref_strand="+" ref_description="SGN-E213170 [cLEC-72-K12]">
      <seq>ggagtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtancagaagtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccaaaatttcttacctggacatcatcagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82981" stop="79888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82681" g_stop="82533" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="321" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80188" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="591" r_length="270" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E213170" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E213170" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82681" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGG</genome_strand>
        <mrna_strand>GGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTANCAGAAGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCAAAATTTCTTACCTGGACATCATCAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E306010" ref_strand="+" ref_description="SGN-E306010 [cLEY-17-F10]">
      <seq>cctttcctataaaaagccgttacgtctctccagtaagtcatctcagccaactggagtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="83033" stop="79891"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82733" g_stop="82533" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="201" r_length="201" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="373" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80191" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="640" r_length="267" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E306010" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E306010" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82733" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80191"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTTCCTATAAAAAGCCGTTACGTCTCTCCAGTAAGTCATCTCAGCCAACTGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATC</genome_strand>
        <mrna_strand>CCTTTCCTATAAAAAGCCGTTACGTCTCTCCAGTAAGTCATCTCAGCCAACTGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E213037" ref_strand="+" ref_description="SGN-E213037 [cLEC-72-F7]">
      <seq>ttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82970" stop="79892"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82670" g_stop="82533" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="138" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="310" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80192" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="576" r_length="266" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E213037" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E213037" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82670" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80192"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCAT</genome_strand>
        <mrna_strand>TTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E266244" ref_strand="+" ref_description="SGN-E266244 [cLEI-3-O6]">
      <seq>gattcttctctctgtttttagtaagtacgaaacccttttttgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaagaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82974" stop="79893"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82675" g_stop="82533" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="143" r_length="143" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="315" r_length="172" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80193" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="580" r_length="265" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E266244" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>580</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E266244" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82675" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80193"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCA</genome_strand>
        <mrna_strand>GATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTTTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAAGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E325708" ref_strand="+" ref_description="SGN-E325708 [cTOC-15-D3]">
      <seq>ccctttcctataaaaagccgttacgtctctccagtaagtcatctcagccaactggagtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctganaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcatactgtctcagttgcngaagatgaactgatgcgaatcttaattcttgtccgaaattcttacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="83034" stop="79901"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82734" g_stop="82533" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="202" r_length="202" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="203" r_stop="374" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80201" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="629" r_length="255" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E325708" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>631</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E325708" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82734" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80201"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTTTCCTATAAAAAGCCGTTACGTCTCTCCAGTAAGTCATCTCAGCCAACTGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCT</genome_strand>
        <mrna_strand>CCCTTTCCTATAAAAAGCCGTTACGTCTCTCCAGTAAGTCATCTCAGCCAACTGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGANAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGC-ATACTGTCTCAGTTGCNGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAA-TTCTTACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E262001" ref_strand="+" ref_description="SGN-E262001 [cLEG-58-F21]">
      <seq>aaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82924" stop="79906"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82624" g_stop="82533" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="264" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80206" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="516" r_length="252" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E262001" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E262001" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82624" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80206"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCT</genome_strand>
        <mrna_strand>AAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E205437" ref_strand="+" ref_description="SGN-E205437 [cLEC-28-N15]">
      <seq>ttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82976" stop="79907"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82676" g_stop="82533" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="316" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80207" g_length="251"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="567" r_length="251" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E205437" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E205437" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82676" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80207"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTC</genome_strand>
        <mrna_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E299312" ref_strand="+" ref_description="SGN-E299312 [cLET-43-D6]">
      <seq>ggagtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgataggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82981" stop="79911"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82681" g_stop="82533" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="321" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80211" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="568" r_length="247" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E299312" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E299312" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82681" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80211"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAA</genome_strand>
        <mrna_strand>GGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGATAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E270090" ref_strand="+" ref_description="SGN-E270090 [cLEM-7-D13]">
      <seq>tggagtttattcttctctctgtttttagtaagtacgaaaccgttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82982" stop="79921"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82682" g_stop="82533" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="150" r_length="150" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="322" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80221" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="559" r_length="237" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E270090" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E270090" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82682" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80221"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTC</genome_strand>
        <mrna_strand>TGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCGTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E204321" ref_strand="+" ref_description="SGN-E204321 [cLEC-13-I19]">
      <seq>ttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggctaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82976" stop="79921"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82676" g_stop="82533" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="316" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80221" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="553" r_length="237" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E204321" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204321" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82676" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80221"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTC</genome_strand>
        <mrna_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCTAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E246872" ref_strand="+" ref_description="SGN-E246872 [cLEF-41-O16]">
      <seq>ttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatgcaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82976" stop="79921"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82676" g_stop="82533" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="316" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80221" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="553" r_length="237" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E246872" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246872" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82676" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80221"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTC</genome_strand>
        <mrna_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATGCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E208133" ref_strand="+" ref_description="SGN-E208133 [cLEC-34-L22]">
      <seq>tcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82972" stop="79921"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82672" g_stop="82533" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="140" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="312" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80221" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="549" r_length="237" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E208133" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E208133" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82672" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80221"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTC</genome_strand>
        <mrna_strand>TCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E320994" ref_strand="+" ref_description="SGN-E320994 [cTOB-13-D21]">
      <seq>aaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaagcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaagtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82921" stop="79921"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82621" g_stop="82533" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="261" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80221" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="498" r_length="237" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E320994" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>498</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E320994" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82621" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80221"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTC</genome_strand>
        <mrna_strand>AAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAAGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E335622" ref_strand="+" ref_description="SGN-E335622 [cTOE-8-I12]">
      <seq>tggagtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82982" stop="79925"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82682" g_stop="82533" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="150" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="322" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80225" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="555" r_length="233" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E335622" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E335622" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82682" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80225"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTA</genome_strand>
        <mrna_strand>TGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E267969" ref_strand="+" ref_description="SGN-E267969 [cLEI-15-E21]">
      <seq>ttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcatatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgcctaggggatacgtgaatggttagagtctaaaggtcatccctccataatcgcttctgactgataaggaccagattgtgagctcgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagagggcaaccaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgccaatctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82940" stop="79926"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82640" g_stop="82533" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="108" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="280" r_length="172" r_score="0.936"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="0.82"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80226" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="512" r_length="232" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E267969" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267969" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82640" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80226"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTT</genome_strand>
        <mrna_strand>TTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCATATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTAGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCCCTCCATAATCGCTTCTGACTGATAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAGGGCAACCAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCCAATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E275589" ref_strand="+" ref_description="SGN-E275589 [cLEN-10-P7]">
      <seq>actggagtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82984" stop="79927"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82684" g_stop="82533" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="152" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="324" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80227" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="555" r_length="231" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E275589" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E275589" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82684" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80227"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCT</genome_strand>
        <mrna_strand>ACTGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E239941" ref_strand="+" ref_description="SGN-E239941 [cLED-29-B3]">
      <seq>gagcttgagaaacacattcctgatctccatgtgttgagttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcacatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcaggtgcggaagatgaactgatgcgaatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="80758" stop="79927"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80458" g_stop="80227" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="232" r_length="232" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E239941" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>232</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E239941" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80458" e_stop="80227"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCT</genome_strand>
        <mrna_strand>GAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGAGTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCACATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGGTGCGGAAGATGAACTGATGCGAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E232047" ref_strand="+" ref_description="SGN-E232047 [cLED-7-B9]">
      <seq>tggagtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82982" stop="79931"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82682" g_stop="82533" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="150" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="322" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80231" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="549" r_length="227" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E232047" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E232047" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82682" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80231"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGA</genome_strand>
        <mrna_strand>TGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E208144" ref_strand="+" ref_description="SGN-E208144 [cLEC-34-P6]">
      <seq>agtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82979" stop="79934"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82679" g_stop="82533" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="146" r_length="146" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="318" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80234" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="542" r_length="224" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E208144" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E208144" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82679" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80234"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATG</genome_strand>
        <mrna_strand>AGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCC-AAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E300736" ref_strand="+" ref_description="SGN-E300736 [cLEW-8-P11]">
      <seq>tttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82977" stop="79934"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82677" g_stop="82533" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="145" r_length="145" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="317" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80234" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="541" r_length="224" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E300736" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>541</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E300736" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82677" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80234"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATG</genome_strand>
        <mrna_strand>TTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E246304" ref_strand="+" ref_description="SGN-E246304 [cLEF-40-J15]">
      <seq>ttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82976" stop="79956"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82676" g_stop="82533" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="316" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80256" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="518" r_length="202" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E246304" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>518</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246304" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82676" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80256"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTC</genome_strand>
        <mrna_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E209493" ref_strand="+" ref_description="SGN-E209493 [cLEC-54-G8]">
      <seq>ttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaagaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtaccagaggtcactggaagcaatactgtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82970" stop="79957"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82670" g_stop="82533" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="138" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="310" r_length="172" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80257" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="511" r_length="201" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E209493" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E209493" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82670" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80257"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCT</genome_strand>
        <mrna_strand>TTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAAGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTACCAGAGGTCACTGGAAGCAATACTGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E249792" ref_strand="+" ref_description="SGN-E249792 [cLEF-57-B18]">
      <seq>ttcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82973" stop="79958"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82673" g_stop="82533" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="141" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="313" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80258" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="513" r_length="200" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E249792" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E249792" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82673" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80258"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTC</genome_strand>
        <mrna_strand>TTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E325847" ref_strand="+" ref_description="SGN-E325847 [cTOC-12-B16]">
      <seq>gagtttattcttctctctgtttttagtaagtacgaaacggttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82980" stop="79961"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82680" g_stop="82533" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="148" r_length="148" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="320" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80261" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="517" r_length="197" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E325847" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E325847" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82680" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80261"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACT</genome_strand>
        <mrna_strand>GAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACGGTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E247734" ref_strand="+" ref_description="SGN-E247734 [cLEF-42-B17]">
      <seq>ttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaagcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82976" stop="79961"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82676" g_stop="82533" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="316" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80261" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="513" r_length="197" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E247734" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E247734" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82676" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80261"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACT</genome_strand>
        <mrna_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E201817" ref_strand="+" ref_description="SGN-E201817 [cLEC-11-D18]">
      <seq>ttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82976" stop="79983"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82676" g_stop="82533" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="316" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80283" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="491" r_length="175" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E201817" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E201817" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82676" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80283"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGC</genome_strand>
        <mrna_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E284248" ref_strand="+" ref_description="SGN-E284248 [cLER-16-O22]">
      <seq>tggagtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82982" stop="79988"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82682" g_stop="82533" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="150" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="322" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80288" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="492" r_length="170" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E284248" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E284248" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82682" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80288"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACA</genome_strand>
        <mrna_strand>TGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E334813" ref_strand="+" ref_description="SGN-E334813 [cTOE-3-E5]">
      <seq>gagtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82980" stop="79988"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82680" g_stop="82533" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="148" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="320" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80288" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="490" r_length="170" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E334813" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>490</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E334813" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82680" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80288"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACA</genome_strand>
        <mrna_strand>GAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E335661" ref_strand="+" ref_description="SGN-E335661 [cTOE-8-P13]">
      <seq>tattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcagatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaagcttcccctggccccaaaaagattgtgggtgtttactacaaagcaaatgaatatgctgaaatgaaccccaactatttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaacgaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82975" stop="79990"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82675" g_stop="82533" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="316" r_length="172" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80290" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="484" r_length="168" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E335661" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>483</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E335661" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82675" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80290"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGC-GATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGA</genome_strand>
        <mrna_strand>TATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCAGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTACTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTATTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAACGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E202248" ref_strand="+" ref_description="SGN-E202248 [cLEC-6-E21]">
      <seq>cgcttctaagtactgggccttcgccctttcctataaaaagccgttacgtctctccagtaagtcatctcagccaactggagtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacacagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="83057" stop="79998"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82757" g_stop="82533" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="225" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="397" r_length="172" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80298" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="398" r_stop="557" r_length="160" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E202248" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E202248" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82757" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80298"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCTTCTAAGTACTGGGCCTTCGCCCTTTCCTATAAAAAGCCGTTACGTCTCTCCAGTAAGTCATCTCAGCCAACTGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGC</genome_strand>
        <mrna_strand>CGCTTCTAAGTACTGGGCCTTCGCCCTTTCCTATAAAAAGCCGTTACGTCTCTCCAGTAAGTCATCTCAGCCAACTGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACACAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E317598" ref_strand="+" ref_description="SGN-E317598 [cTOB-8-K17]">
      <seq>tggagtttattcttctctctgtttgtagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgattccgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcagaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82982" stop="80000"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82682" g_stop="82533" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="150" r_length="150" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="322" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80300" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="480" r_length="158" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E317598" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E317598" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82682" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80300"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCT</genome_strand>
        <mrna_strand>TGGAGTTTATTCTTCTCTCTGTTTGTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTCCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAGAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E245040" ref_strand="+" ref_description="SGN-E245040 [cLEF-13-E22]">
      <seq>ttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82976" stop="80009"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82676" g_stop="82533" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="316" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80309" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="465" r_length="149" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E245040" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>465</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245040" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82676" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80309"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCT</genome_strand>
        <mrna_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E240654" ref_strand="+" ref_description="SGN-E240654 [cLED-21-C1]">
      <seq>ttatttttctctctggttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttttgctgacagctggaattggatcagatcatgttgatctgaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82976" stop="80011"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82676" g_stop="82533" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="316" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80311" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="463" r_length="147" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E240654" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>463</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E240654" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82676" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80311"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAG</genome_strand>
        <mrna_strand>TTATTTTTCTCTCTGGTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTTTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E270719" ref_strand="+" ref_description="SGN-E270719 [cLEM-6-J15]">
      <seq>ggagtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaagcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaagaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaagcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82981" stop="80015"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82681" g_stop="82533" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="321" r_length="172" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80315" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="464" r_length="143" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E270719" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E270719" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82681" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80315"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTG</genome_strand>
        <mrna_strand>GGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAAGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAAGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E245157" ref_strand="+" ref_description="SGN-E245157 [cLEF-13-E10]">
      <seq>ttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82976" stop="80015"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82676" g_stop="82533" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="316" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80315" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="459" r_length="143" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E245157" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>459</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245157" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82676" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80315"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTG</genome_strand>
        <mrna_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E275211" ref_strand="+" ref_description="SGN-E275211 [cLEN-9-G13]">
      <seq>ttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82976" stop="80015"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82676" g_stop="82533" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="316" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80315" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="459" r_length="143" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E275211" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>459</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E275211" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82676" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80315"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTG</genome_strand>
        <mrna_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E252874" ref_strand="+" ref_description="SGN-E252874 [cLEG-16-J19]">
      <seq>tcttctctctgtttttagtaagtccgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttacccagagaacttcaggcttcccctgccccaaaaagatgggggtctcaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82972" stop="80015"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82672" g_stop="82533" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="141" r_length="141" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.84"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="305" r_length="164" r_score="0.953"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80315" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="447" r_length="142" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E252874" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>455</cumulative_length_of_scored_exons>
        <coverage percentage="1.018" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E252874" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82672" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80315"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTA-CCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTG</genome_strand>
        <mrna_strand>TCTTCTCTCTGTTTTTAGTAAGTCCGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCT-GCCCCAAAAAGA-TG-GGG-G---TCT-CAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAG-AGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E266897" ref_strand="+" ref_description="SGN-E266897 [cLEI-7-K3]">
      <seq>tttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaagcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82977" stop="80018"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82677" g_stop="82533" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="145" r_length="145" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="317" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80318" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="457" r_length="140" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E266897" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>457</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E266897" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82677" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80318"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGAT</genome_strand>
        <mrna_strand>TTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E239415" ref_strand="+" ref_description="SGN-E239415 [cLED-23-G7]">
      <seq>ttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82976" stop="80048"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82676" g_stop="82533" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="316" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80348" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="426" r_length="110" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E239415" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>426</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E239415" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82676" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80348"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTG</genome_strand>
        <mrna_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E241017" ref_strand="+" ref_description="SGN-E241017 [cLED-24-J2]">
      <seq>ttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82976" stop="80056"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82676" g_stop="82533" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="316" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80356" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="418" r_length="102" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E241017" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>418</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E241017" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82676" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80356"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAAC</genome_strand>
        <mrna_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E336580" ref_strand="+" ref_description="SGN-E336580 [cTOE-4-E6]">
      <seq>tggagtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgnnacaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatattcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82982" stop="80059"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82682" g_stop="82533" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="150" r_length="150" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="322" r_length="172" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80359" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="421" r_length="99" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E336580" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>421</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E336580" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82682" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80359"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTAC</genome_strand>
        <mrna_strand>TGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGNNACACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATATTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E367392" ref_strand="+" ref_description="SGN-E367392 [cLPT-7-O6]">
      <seq>gagtttattcttctctctgcttttagtaagtacaaaccctttgctgtaaatccgaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaactttaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctggaatgaaccccaactttttgggctgtgcataaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacatccctgatctccatgtgttgatttcgaccccttttcattctgcctatgtcacggctgaaaggatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82980" stop="80077"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82680" g_stop="82533" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="147" r_length="147" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="319" r_length="172" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80377" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="400" r_length="81" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E367392" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>401</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E367392" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82680" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80377"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCA</genome_strand>
        <mrna_strand>GAGTTTATTCTTCTCTCTGCTTTTAGTAAGTAC-AAACCCTTTGCTGTAAATCCGAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTTAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGGAATGAACCCCAACTTTTTGGGCTGTGCATAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATCCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATTCTGCCTATGTCACGGCTGAAAGGATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E318654" ref_strand="+" ref_description="SGN-E318654 [cTOB-9-P24]">
      <seq>gaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagttcttaccatataacttcaggcttcccctggccccaaaaagatagcgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgcgcagaaaatgccttgaggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctgcatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82905" stop="80078"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82605" g_stop="82533" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="73" r_length="73" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="245" r_length="172" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80378" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="325" r_length="80" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E318654" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>325</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E318654" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82605" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80378"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATC</genome_strand>
        <mrna_strand>GAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTCTTACCATATAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATAGCGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGCGCAGAAAATGCCTTGAGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTGCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E208584" ref_strand="+" ref_description="SGN-E208584 [cLEC-39-L8]">
      <seq>tcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaacccccactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcaggacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgtcgatttcgaccccttttcatcctgcctat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82972" stop="80096"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82672" g_stop="82533" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="140" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="312" r_length="172" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80396" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="374" r_length="62" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E208584" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>374</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E208584" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82672" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80396"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTAT</genome_strand>
        <mrna_strand>TCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCCACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGGACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTCGATTTCGACCCCTTTTCATCCTGCCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E341207" ref_strand="+" ref_description="SGN-E341207 [cTOE-22-K15]">
      <seq>tggagtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82982" stop="80109"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82682" g_stop="82533" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="150" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="322" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80409" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="371" r_length="49" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E341207" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>371</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E341207" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82682" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80409"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTT</genome_strand>
        <mrna_strand>TGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E208770" ref_strand="+" ref_description="SGN-E208770 [cLEC-51-B19]">
      <seq>ttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcggaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacatttcctgatctccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82976" stop="80129"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82676" g_stop="82533" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="316" r_length="172" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80429" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="346" r_length="30" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E208770" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>345</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E208770" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82676" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80429"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACA-TTCCTGATCTCCAT</genome_strand>
        <mrna_strand>TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCGGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTTCCTGATCTCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E240827" ref_strand="+" ref_description="SGN-E240827 [cLED-24-N3]">
      <seq>aaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82946" stop="80136"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82646" g_stop="82533" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="286" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80457" g_stop="80436" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="308" r_length="22" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E240827" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>308</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E240827" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82646" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
          <exon e_start="80457" e_stop="80436"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGA</genome_strand>
        <mrna_strand>AAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E205702" ref_strand="+" ref_description="SGN-E205702 [cLEC-21-G16]">
      <seq>agtttatacttctctctgttcttagtaagtacgaaacccttgtctgtaaatggaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcatgctttccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgaccaagaagggaccagattgtgagcttgaaaaacacattcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82979" stop="80898"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82679" g_stop="82533" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="147" r_length="147" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81201" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="320" r_length="173" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E205702" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>319</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E205702" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82679" e_stop="82533"/>
          <exon e_start="81372" e_stop="81201"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAA-GGACCAGATTGTG</genome_strand>
        <mrna_strand>AGTTTATACTTCTCTCTGTTCTTAGTAAGTACGAAACCCTTGTCTGTAAATGGAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACCAAGAAGGGACCAGATTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E274128" ref_strand="+" ref_description="SGN-E274128 [cLEN-8-O7]">
      <seq>gtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttgaggcttcccctggccccaaaaagattgggggtgtgttctacaaagcaaatgaatatgctgaagtgagccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82978" stop="80920"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82678" g_stop="82533" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="146" r_length="146" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81220" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="299" r_length="153" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E274128" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>299</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E274128" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82678" e_stop="82533"/>
          <exon e_start="81372" e_stop="81220"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGAC</genome_strand>
        <mrna_strand>GTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGGGGGTGTGTTCTACAAAGCAAATGAATATGCTGAAGTGAGCCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E204751" ref_strand="+" ref_description="SGN-E204751 [cLEC-14-N18]">
      <seq>agtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82979" stop="80927"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82679" g_stop="82533" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="147" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81227" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="293" r_length="146" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E204751" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>293</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204751" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82679" e_stop="82533"/>
          <exon e_start="81372" e_stop="81227"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCAC</genome_strand>
        <mrna_strand>AGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E338733" ref_strand="+" ref_description="SGN-E338733 [cTOE-21-A2]">
      <seq>ggggagtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82981" stop="80989"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82683" g_stop="82533" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="151" r_length="151" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81289" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="235" r_length="84" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E338733" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>235</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E338733" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82683" e_stop="82533"/>
          <exon e_start="81372" e_stop="81289"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGT</genome_strand>
        <mrna_strand>GGGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E339737" ref_strand="+" ref_description="SGN-E339737 [cTOE-16-B17]">
      <seq>gaattcggcaccgaggctggagttcattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgcctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82983" stop="80990"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82682" g_stop="82533" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="168" r_length="151" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81290" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="251" r_length="83" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E339737" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>233</cumulative_length_of_scored_exons>
        <coverage percentage="0.928" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E339737" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82682" e_stop="82533"/>
          <exon e_start="81372" e_stop="81290"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTG-CTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTG</genome_strand>
        <mrna_strand>TGGAGTTCATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E293785" ref_strand="+" ref_description="SGN-E293785 [cLET-37-A22]">
      <seq>tttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82977" stop="81049"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82677" g_stop="82533" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="145" r_length="145" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81372" g_stop="81349" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="169" r_length="24" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E293785" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>169</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E293785" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82677" e_stop="82533"/>
          <exon e_start="81372" e_stop="81349"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATT</genome_strand>
        <mrna_strand>TTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E248671" ref_strand="+" ref_description="SGN-E248671 [cLEF-58-K15]">
      <seq>ttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggtaactagccatttctcctcaatagccactttttgttgcttttgttttatatgacctagttttcgccctttgatgaattatcggaaaccggcacggatcaactccgatttttcgagaatcaagtgagttggagattggaacagaggaaactaaaggaatttaaccgtgtaaaggaaaaaattaaacacactgtatttggtgctctacccctcgtctcttctttttggctttccccgtactctacacaccaaatgaaatggctcggatatgaaaggactaataacttttcagttttcattactgcgtccttttttaagctttcagttttaatttgcgtgaatatacctaatttttattagggtagagttatatgtttcaaattaaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="-" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="82970" stop="81846"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82670" g_stop="82146" g_length="525"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="525" r_length="525" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="-" ref_id="SGN-E248671" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E248671" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82670" e_stop="82146"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATT</genome_strand>
        <mrna_strand>TTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E744923" ref_strand="+" ref_description="SGN-E744923 [GI|1815667]">
      <seq>gtaaacgagcgttgatttgtcgctgacgaaatttacagtcaagagtagtaaccggttgtagtgaaaaaatggagtcgaggaaagtgacgaagacgctggaagatcaatgggtggtggagcgtcgagtccgagagatatacgattatttctacagcatttcccccaactctccgtccgacctcatagagatcgaacgtgacaaacacttcggttatctaagccaaggtctcagaaaacttggtccgtcgttttccgttttggatgccagtcgaccatggctttgctactggacacttcattcaatcgctttgttgggagaatctattggtggcaaactggaaaatgatgcaattgactttctgacccgttgccaggataaagatggtggctatggaggtggacctggtcagatgcctcatcttgcaactacttatgctgcagtcaattcactaataactttgggcaaacctgaagctctgtcatcaattaatagagaaaagttgtacacatttttgctgcgaatgaaagacgcaagtggtggattcaggatgcacgatggtggagaagtagatgttcgtgcctgttatactgccatttctgttgcaaatatattaaacattgtggatgacgagctgattcatggtgttggaaattacatcctaagttgtcagacttatgaaggtggaattgctggcgaaccaggttctgaagctcatggtgggtatactttctgtgggttggctgcaatgattctgatcaacgaagtagatcgattggacttgccaggtttaattgattgggtggtatttagacaaggggtcgaaggtggatttcaaggcaggacaaataaattagtcgatggctgctattccttttggcagggcgcggtagtgtttcttatacaaagactaaatttgatagtccatgaacaactagggctgtcaaatgacctcagtacagaaagtgctgatgattcttcagagtcagagttatctgatgaagaagagcatttggaagggatatcctctcatgttcaggatactttccctcttggacaagcaggtgcttgtcaagaaaatgcttctcatagcccaaaaatagcagatactggatatgagtttatcaaccgacccatagctatgaggcctctctttgacagcatgtatctgcagcaatatgttcttctttgctctcagattgaagttggtggtttcagagacaaacctgggaagggtagagactactaccatacctgttactgtttaagtggtctttcaattgctcagtatagctggaccgacgaagctgattctacaccattacccagggatgtatttggtccttattccaaatgtctgttggaacaggttcacccactcttcaacgtagtgttggatcggtattatgaagctcgcgaatactctcaggcttgtgagactgtttcaccactttcattagcaccaactttttcagaaacttagttgcaatccagaagttaaaagtgtcattgggttcaaaagagttgtgatcgtttatgtacatatccttgcatttgtatacgtgatacaagttgagagaataacgggtactttctgaacttgctgaactagcacgtaaattcgtctctggtttagtgaggtctgtaaacatcaatgtgaaattgcgagatatgcatgtaatagtggctaagatttacaaatctggataccggttattagtgatcagaaatttcattcaatttcccaaacggtcacctaagtttaggatattgctttaaaatattatttatttttcatttaagaatcaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="88325" stop="101003"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88625" g_stop="88805" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88806" i_stop="88908" i_length="103">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88909" g_stop="88995" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="268" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88996" i_stop="90176" i_length="1181">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.593" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90177" g_stop="90282" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="374" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="90283" i_stop="91406" i_length="1124">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="91407" g_stop="91442" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="410" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="91443" i_stop="92081" i_length="639">
            <donor d_prob="0.894" d_score="0.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="92082" g_stop="92164" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="493" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="92165" i_stop="92245" i_length="81">
            <donor d_prob="0.533" d_score="1.00"/>
            <acceptor a_prob="0.738" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="92246" g_stop="92299" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="494" r_stop="547" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="92300" i_stop="92784" i_length="485">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="92785" g_stop="92836" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="548" r_stop="599" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="92837" i_stop="93463" i_length="627">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="93464" g_stop="93528" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="600" r_stop="664" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="93529" i_stop="94843" i_length="1315">
            <donor d_prob="0.496" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="94844" g_stop="94900" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="665" r_stop="721" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="94901" i_stop="95050" i_length="150">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="95051" g_stop="95123" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="722" r_stop="794" r_length="73" r_score="0.973"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="95124" i_stop="98294" i_length="3171">
            <donor d_prob="0.521" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="98295" g_stop="98381" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="795" r_stop="881" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="98382" i_stop="98467" i_length="86">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.919" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="98468" g_stop="98648" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="882" r_stop="1062" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="98649" i_stop="99207" i_length="559">
            <donor d_prob="0.776" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="99208" g_stop="99341" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="1063" r_stop="1196" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="99342" i_stop="100089" i_length="748">
            <donor d_prob="0.816" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="100090" g_stop="100700" g_length="611"/>
          <reference_exon_boundary r_type="cDNA" r_start="1197" r_stop="1808" r_length="612" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1809" polyA_stop="1832"/>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E744923" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>1807</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E744923" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88625" e_stop="88805"/>
          <exon e_start="88909" e_stop="88995"/>
          <exon e_start="90177" e_stop="90282"/>
          <exon e_start="91407" e_stop="91442"/>
          <exon e_start="92082" e_stop="92164"/>
          <exon e_start="92246" e_stop="92299"/>
          <exon e_start="92785" e_stop="92836"/>
          <exon e_start="93464" e_stop="93528"/>
          <exon e_start="94844" e_stop="94900"/>
          <exon e_start="95051" e_stop="95123"/>
          <exon e_start="98295" e_stop="98381"/>
          <exon e_start="98468" e_stop="98648"/>
          <exon e_start="99208" e_stop="99341"/>
          <exon e_start="100090" e_stop="100700"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAACGAGCGTTGATTTGTCGCTGACGAAATTTACAGTCAAGAGTAGTAACCGGTTGTAGTGAAAAAATGGAGTCGAGGAAAGTGACGAAGACGCTGGAAGATCAATGGGTGGTGGAGCGTCGAGTCCGAGAGATATACGATTATTTCTACAGCATTTCCCCCAACTCTCCGTCCGACCTGTTAGCTCTCAACCTTTTTCAATTTCTAGGGTTCTTATTCCTTTATTCATCAACTTATTTTTGTGTTGATTTCTTTCTTTCTTTCTTTCTTTCTGTTATAAAGCATAGAGATCGAACGTGACAAACACTTCGGTTATCTAAGCCAAGGTCTCAGAAAACTTGGTCCGTCGTTTTCCGTTTTGGATGCCAGGTAAGTTCCCTCTATCTTTGATCGTTTCTCACCACTAGTTCACTTGTGATGTTGAAGATTCCAATTTTAACTGGTGGCTAATTGGAAAACAAAATTAAAATTTCGTATTATGAATTCAATGTGCTTTAAAAGGAAAATTATTTAGTATTGGAATGGAATTGACTTGAATGAAGTAATGTCTTAGTTAATATAACTTTATATAGCTGATCTCAACTTATTTGGGAGCTAGTCTATTGATTGATTGAGTGACTTTTTAGGAAGAAAAGAACATTGTTTGCAAGATTCAATCGTAATGAGAGAGTTGAGATTCTATGGTAACGAGAGGAAAGAACTAAACAAGCTAACGTGGATGAATATTGACCTTCAAATAAACTCTCTCCAAGCATCCACCCAAGAGTGCAGTCTAGTGGTTAATGAACTAGGTCGAGAATCACGAGGTCTCAAATTCAAAGGCAAAAGGTTAGGTGAGTTCTTCCCAAGTTCTTATACTGTCCATGTATTGAGGGACAGAGTTACCCACTATCTATGCTAGTGGGAGGTAGGACGTACCACGTGGAAATAATCGAGTTGAGCACTCCATAGTTACAAAAAATAAAAATAAAGCTCTCTCCAATGATTAGTTACATACAACATATTTGGATTGGTATAAGTTTCATAATGACTAATCTTGTCAGTGTAGGACACACTAAGGTTTTCTTCTTTTCCATTTTCTCGTGGGGGATCACAATGTTGTCCAACCAACTTGCTCATACCTCGACTAATGGATTGAAACATGCTATCTCTCACTAGCACATGTGCTATCTACCATGGGGTTTGGAACTTTGGTGTATCAGGTTCATCTGAACCCAATAAAATTCAATGTTGGGCATAAATCTGTGTGTAAATTTTTCATGGAATTACAATAAATAGTATATATGAAAGCATAAATTTTATAAATATAATGGGTTCAACAATAAAACTTGAGGGGAAGAATTCTGTGGTCTCCCATTCCCAATGTCCATTCAAACTTCATTAAGTCATGCCCTTTGGTTCCCTTTCCCATACCTCACCAACATAATATAAAAGTTTGGAAAATGTGTTCATCAAGATGGGATCTTGGCGTCTATTCTAGTCCAATGGAACCAAAGGCTATTTTGTTAACATCAACTATTTCTATGCCTTACTTAAGTTTTTCTTTCTAGTCGACCATGGCTTTGCTACTGGACACTTCATTCAATCGCTTTGTTGGGAGAATCTATTGGTGGCAAACTGGAAAATGATGCAATTGACTTTCTGACCCGTTGCCAGGTTTGTTCATTTTGTATTCTGCTGGTTATGTATCTATGTCTTTCTTTAAAAAGAATTGTGTAGGGATTTAGTGTATTTGTTTTTAGGGTGGGTTCAGAGCAAGCTAATAGGATCACTTTCACTGAGGAAAACTTATGTGTAATGAATCACCTTTTTTGTTTGTTTTAGGACCATACTGTGCTACAAGAGCATGATATATATAACAGCAGGCTTTTTTTTACATATTGAGCAGGAGTTTCTTGTGGTGATAAAAGTGAGTTTGAAGCATTAAACTTAGAGAAATTGTTTTACCTCCCAGATTTTGAAGTTAAAACCTGAAAATTTGAGTTTTTGAAATTGTGATTTTTGGAACTTGAAGTTGTGCTTATACATGCATATTACTTGGAAAATTTGAAACTTTTGTGAGTAAAAGTGAATTTCTCCCAAAACTGGTCTGGACCAGCTTTTGGAACTTGATATTTTTTTGAAGACAGATTTTCAAAATTTGATTGAATATCTATGGCCAAACAGATATTTTAAGACAAGTGTTCTAAGCAGAAAAGGCTACTACTAAAGTACATGCTATATTCTAAGTGCCCAGTTACGTCTTGCTTAGGGATGACAACTTTAATAGGCTTCAGCTACTGTACAAAACTCAAGTCTCTGTAGACTTCTCAAAGATATGGTAGACTTTATAACAAACTTCAAGAGGCTTTCCACCAAGGACTTTATTGTGGTTCTTATGAACTAAAATTGGGACTACTTGTATTCATCTCTGTACTATTGCTTAGACATTGTAATCATAAAGAGTTATAGACCAGTGCGCATGATTGATTGTGTTTAGGAGTGACTAATAATGATGCATGGAGAAAAGATTCCGTAGTGATATTCGAGCCTAGTTATAGAAATGTGATATACATGGTGAGTAGAATGTCATCCCAAATTATTGTTATTACCATATTTGCTTAAAAGATAATTTATTGTATTTATGATATGTTTAATCATCCACCTTTCCAGAATACTGGTGTAACTGTCCTTTTTTTTTTCTTGCCTGCGATTCTAGCTAATTTGTTTTTGGACTTCTCGTTCAATAAAATGCGGTAAGATTTAGTTTCATGTGTTGTTTACTGTTACCTTCCTCACAGGATAAAGATGGTGGCTATGGAGGTGGACCTGGTCAGGCAAGTCAAATTCTCCCACTCCAGTCTTAGTGCCGTTAAATCAGATTTGTGTCAGATTCTTCATGCTTATTTTCACATTGAGTTTGATTATCTGATGTCTTCAATTGTTTTTAATATGCAGTATGCTGCTTTATTTTGTGATGATGGTTGATTTGAATATTGTAAATTTGTTAACTCTATAATTCTGTTGGAGGACTTATAATTAAAAGATAATTCTATTAGAGGGAAATAGTCATCTGTATTGATATGCATTTAACTATTGGCATGGTCAGTGGTTTGAGCTTGGGACTTCCACGTTGGAGGTATCCAGTTCGAAACGGAAACGCCTTGCCAGCGAAAGCAAGGGGTTTGCCTTCTGGGTCGAGCTCGCATGGTGCGAGTTACCTCTCCTATGTAGTTTGCGAGCTATTGCATAGGAGCGGGGTTTTACCCTTGTCATTAAAAAAAAAAAGACTATTGGCCTGGTTCTTGTTCTTTTATAAGTTAGCTTGAAACTCTTTTTCTGTTTCTTTTAGAATCACAAATTTAACAGTTCCAAGCTTCGTTTATTCTGGTCAACCTGTTAATTTTATACAGTTCTTGTGCTTCTTATCATTAAGGTTCTTTGAAGTAATACTTGTATTGTATTGCTTTTTTCAGATGCCTCATCTTGCAACTACTTATGCTGCAGTCAATTCACTAATAACTTTGGGCAAACCTGAAGCTCTGTCATCAATTAATAGGTGCACAAGCTATAGTATGTTTTTGTTGGTGTCTTATCTATTGTTCATTCCTGTTGACATTGATCTAGTAATATGCCTCAGAGAAAAGTTGTACACATTTTTGCTGCGAATGAAAGACGCAAGTGGTGGATTCAGGTAGGATGCTTTCTACTTGTTTACATTATTTGATCAGCTCCCCAATTCATGTCTTCCCTTGTATCTCATTCCTAGTCTGCTGTATTTATCTACTATCAGTTTCTAAAAAAAATCTAGGTGCTTTTCTTTCTATTTGTAACTTGTTTATCCATTTTAAATTTGCCATCTCTATGTTGTATGTGCTAATGTTTTCCATTACTACTGATTCTCCTGATTAATCCTACCTGCTAATTTTGTTATGTTTTCCTTCTGAGGAGAACTAGACTTTTGGGTGAACTAGCACTGTAGTTGACACTTTTACCCTGATCTGTAAATGTATAAATATTTGTGTGTGTATTCTTGAGTTTGTAGATCCAAGTGTATTTAACGAACAGCATCTGAGAGATCACTTGTTTCTAGCATTTTCTTTCAATATTCAAGTTTCCTCAAAAATGACTTGCCACTTCCCATCTTTGCTAAGTTCAAACTTCAAATATTATCTGCAGGATGCACGATGGTGGAGAAGTAGATGTTCGTGCCTGTTATACTGCCATTTCTGTAAGTGTGATCTCCTTGTGATCTGAGTTCTGGTCATATTTTCATTATTTTGCTGCACTTGGATGGAAGACTCTGAGATAAGCTTTAAGCAAATATAATTTTCTTATTGATGAATCATGCAAGCTACGTATGTGAAACTTATCCTTCGGGGTGGCCTAGTGGCTTGGGCTTGGGACTTCCATGTTGGAGGTCTCAAGTTCGAAACCTTGCCAGCGAAAGTAAGGGGTTTTGCCTTCTTGTTTGAGCTTGTTGCACCGGGCTTGCCTAGTGCAGCTTACCTCTCTTATGTGGTTTGCGAGCTATTGCATAAGAGCGGGGGTTTTACCCTGTGCGCACCCAAAGGGTAGTGGTTGCGGGTTTCCCTTGTCATAAAAAAAATTAAAAATATGTGAAACTTAACCGTCTCTTTAGTTTTTTGAAAATAAATTAGATTCGAACATTTCCCGAATTTCATTCACGAGGCAATCAAAGCCTTCTGATACACGCCTCTCTTGCAAATCGTATAGATATTTTATACTTTATTACATACACATTTCTTGCATGTTACATTCTCAAGTTTGACGTTTTTCTTCTTAATTGTCTTTGGAATAATGTGCTTTCATGTTAATTGATACATTAGTTTCTTAGGTTGCAAATATATTAAACATTGTGGATGACGAGCTGATTCATGGTGTTGGAAATTACATCCTAAGGTTGGTTTGAGATGCGCACTCATCTGCTACAGCTTATTCAACTCTCTCTTTATGTATACCGTATTCATACTCAAGCTGTAATATCTCTTTTTGATTTACTAGTGTAGTTGTCTTCCAAGAGAAATTACACGAAATTAAAAGAGCATGGCAGAAATTTGGGAGTTTTAGAGGAGTGTAATCTGATAAAAAGATAACTATCAGAAAAGAAAGCAAGTTATATTACAAATGGTTGTGAGACTAGCGATAATACGTGAGTGATTGTTTTCTATAAAACCCAACATGTTCACTAGTTAACTGTCATGAATTATAGATGTTAATATGGATATTTGGTCATACAAGCTTGAAAATCAGATTGGAAATGCTCACCTCCAACAAAAGACGCAACAAGATAGCACGCATAGAGGATCATGAGTGAAGATTTGTCGAAATGGTTTAATTATGTTTACATTAACCTTCGAATATACCAGACTAGGTACAATACTGGAATAATTGAAGTTGCTATAAAGGCAACGAGGTAGATTCTAAATTACATGAAGAAAAACTGTTTAAAGACCTACAATCACCCAAAAGCCATTACATCAATTAGTTGAGATTAAGGAAAAGAAAAGAATTAGTTGTTGTTAAACTTACATTAGGTTGTGTTTGCCAGAGGTCCTTTTGTGTGGTAAGTTATATGTTTATGGCAGAGCAGGTGTGAGATTTTAAGAACTAATATATCTTAAAGGCAAAATATTGAGTATTGGGATGACACAAAGTAATGGATTTGGAGTATTCATATTACTGTCACCAACTAGTCAGTGCATGTTGACTAGTTAATTATACATACTAAATGCATGACCGAAGCTGGTACTTAAGTTGCATTGAAGGGTTTCTTTGAGATTCGATCCCATTGGTAAGAGAACAATTTTCCAAGTATCATTTCAGAACGATGTTATGTTTGAATATTCATGGCTCTGAGTTGATGACAGCCTCCATTTGTCAGGGATTAAAATATGAGAGATAAGTGATGTTTCCTAATTCTTGCCATCTGAGAAAGTTGAAAGTCCTTGAATAAAAATTGATGAAGGAACTATTCTTTTATTCTAGTTTGTTCTTATTCTTGTTCTCTGAAGTTCTTGATTTAATCCTAGTCTCATCATAAGAATTATTTAGCTAGGATAAATAAGAATTTATTCTATTTAGTGTCAGAAATACAAGATAAGAAGCAGGTGGCAGATCTTTCTTTTCCTTAATGTCCCTCATTTTTTGTTTGAAATATTAAGAATGTATTTTCATGGATAAGCCTTTCCTAAGCTGTTCTCCGTTTTTGCTTCAGTTGTCAGACTTATGAAGGTGGAATTGCTGGCGAACCAGGTTCTGAAGCTCATGGTGGGTAAGTCTCACGTTGGAGATATTCTCATCTTTCTAATCTTGTTTCGCTCTTTTTCTTATAGTTCTCTTTCAATGTTAGTTGCCGTAGTAGAACTATCACTTCTCAGCTTATGATGTTACTGAAGCCCTTTACATTTAACTCATTTTCTAGGTATACTTTCTGTGGGTTGGCTGCAATGATTCTGATCAACGAAGTGAATCGATTGGACTTGCCAGGTTTAATTGTAAGTTGCTTTAGGACTCTGTTGGGGACTGATGAGTGTTGCTAAGATAATCATGTGTGTGTACACTCTCTTTTTTTAGCATCAGAGTGACAGGACTATGGCATTCCTCTCACTGTCATGAAATGGGATATTATCATTTCTTTTTTGTTACTGGCCTTCATGACTGATTAAATGAAACTGAAACAAGATTGTTATAATAGTTGCATTTTAGTTTGTCTTCACAAATGTTCCACATTGCTTTTTTGTTGCTTATCATAAAATGTAAAGGAGAACAAAAAGAACGTAGACTCTTCTCTCAGAAAGTTACTCAACTTTCAATTTTCACTCAAAAGTCACTCAACTATGCACTTCTTTCCAGAAAGTCACTCAACTTTGAATTTTAATTCAAAAGTCACTCAACTATCCACTCTTTCCTCAAAAAGTCACTTAATCTATTAAATTGTTTTTTAATTAAAATTTATTGATATTAATTATTTATATAACAAACCAAAATTTTTAAAAAATAAAAATACCATTTAAAGATCCACCCACCTAACTCGACCCATTAAAAAATATGATATGATCTATTTTATTTTGTCTTTAATCCTAATTCAAGGTTTAAAGAGAGGGATTAATTTAGGATTAAAGACAAAATAAAATGGGTCATATTATATTTTTAATGGGTCGGGTTAGGTGGGTGGATCACTAAATGATTTAATTTATTTTTTAAAAATTTTGGTTTGTTATATAAATAATTAATATCAATAAATTTTAATTAAAAAACAATTTAATAGATTGAGTGACTTTTTGAGGAAAGAGTGGATTGTTGAGTGACTTTTTGAGGAAAGAGTGGATAGTTGAGTGACTTTTGAATTAAAATTCAAAGTTGAGTGACTTTCTGAGAAAGAAGTGCATAGTTGAGTGACTTTTGAGTGAAAATTGAAAGTTGAGTGACTTTCTGAGAGAAGAGTGCATAGTTGAGTGACCATCTGAGGTATTAACTCAGAACGTAGAGATGAGCTGAATCTCAGCTGGCAATTGAAGAACTGGAAAAACATTTTAGTGCTGTGATTACCGAGTACAGGAGATTATTCTAGTACTTAAGGTGATAAGCCATAATCCAAAAAAATAAATAAAATCATTGGTTTTATGATGGTAGGCTATTTTATTTTTACAGATACAACTTTTTGTTGGATATTTAGGAATCAAAAGTGAATAAATTGGAAATAACTTTGATGCACTAGAAAAGTTAGCATATGGGAAAAAGTGTATTAGATGATAAACAACTGGGAAATAACATGCAACATTTTGGTGGTTGTCCTTATTGGGGATGTTGGAGTATTATTTTTGAATGCTTTTTATTACCTTGTTGGAGTATTAAACTTTTGAATGCTTTTTATTACCTTGTGGTCCGACCCTTCCTTGGACCACGCTATGCGCAGGGAGCTTGGTGTTGGGTTCGAAAGTGATTAAGGCGTCATGTCGAAGTTTACAATTGCAAATCAAGATGTTGATAAATTAGATGACAAAAACTTATACTAAAAATTAAAATATTATTATATAGAATTTGGTCAATTGACCTACATATTAAAAACTAATTTAAAACATTAAAATTGTTTAGAAAAAATCTCCCCATAATCCTTCGAGGTGGCCCAGTGGTTTGAGCTTGGGAGTTTCATGTTAGAGGTCTCAAGCTCGAAACCCCTTGCCAGCGAAAGCAAGGGGTTTACCTTCCGGGCCGAGCTCGTCGCACCAGGCTTGCCTAGTGCGGGTTACCTCTCCCATGTGGTTTGCGAGATATTGCATAGAAGCGGGATTTTAACCCCGTGTGCACCCAAAGGGTAGCGGCTGCAGGTTTCCCTTGTCATAAAAATAAAATACAATCTCTCCATAAAGAAAAGTCTCTAAAACGAGTACATTGTGGATTCTATTGTTGTTTTGTGATGACTTATGAGAATAGGGATTTTCAATATATAATCTCCTAACTTTTTCTTTAACGAAAAAATAAACCAAATATGAAAAAAAAATATTTTCCTTTCATGAAAAGTAAAAACATTTGAAGTACTGTTTTGTCTCTTCTTTTAGAAAAAAAGGGAAAAATATTAAAATATACCCCCGAACTATCGTAAATGGTATGCAAATATCCTCCGTCATACTTTTGGGACATTGGTGCCCCTGTCTTCCATAAACTAGAACATATATGCCCTTCACTCAGACACGTGGTCCAATCTTATTCGTCGATAAATATTGTATCGGTGGATAAGATTATAACACGTGTGTGTCCGTTAGTATAAAGGGTATATATGCTCTATTTTTTGGACGACAGGGGCACCAATGTCCCAAAAGTATGATGGATGGTATTTGCATACCATTTACAATAGTTCGAGGGTATATCTGTCCTTTTCCCCTAAAAAAAATAAATTTCAGATAAGCTATGAAAATTAGAACAAAATCTTAACACTTACGGGTCGTTTGTTAGAGCATATAAAAATAATACCTAATAGATTGTGTTAGTAATGAAAGCATTAGTTATACTTGTATTAGTTATGCATTGTTTGGTTTGGTATATTAAAAATAGTGTGTATTATATAAAATATATATTTACAAAAGTAGCCTTCACAATTATGGTGGAAAAGATAACCATATTAATGCACGTATTAAATCCTTTGCATCACTAATACCAAGAAATCCATGCTATTAGTAATACACTCTTCAATACACAATAGAATAGTGTGTATAATTAGTCATACATAGCATGAAAAAATGCACTAAACAAGGTACTACTAATACATATAATTAATGCATGCATTATTTTTGCTAATACACCACCTTTTTATATGGTTAGGAGGATATCTAGGAACTCAGGAATGGCCTTCTGGCCTTTAATTTTGGTTTTGACGCTGGTTCATTTTGTAGAGCTGCACCAGGTTCTGTTGCTGCATTCCTGGGATTGTTGGGGGTAGATTATTAATGAACGTATTAGTTCCTTTTCCTTCCAAGTATCTTTCGTATAGTAGTACCTCTACATGACTTCCTCTTAGTCTCTTTACTTCTCTTAGCAGTTTCATTCTGTTGCTTTTTTAATAACTCTTCCCAAGTTGAGTTCTATCGAGTTGTTGAATTGATGTTACTTAAATCTGGATCATCTGACGGTATTGATGGAGATGATGTATTATGATTATGAATCTTTAGGATTGGGTGGTATTTAGACAAGGGGTCGAAGGTGGATTTCAAGGCAGGACAAATAAATTAGTCGATGGCTGCTATTCCTTTTGGCAGGTGACTACCAGTTTTACCTTTATGTCCTGAACTCTTCCATTTCCAGTTTAATTATTACTGAGCTAAAGATGACTTTGATTGATCAGGGCGCGGTAGTGTTTCTTATACAAAGACTAAATTTGATAGTCCATGAACAACTAGGGCTGTCAAATGACCTCAGTACAGAAAGTGCTGATGATTCTTCAGAGTCAGAGTTATCTGATGAAGAAGAGCATTTGGAAGGGATATCCTCTCATGTTCAGGATACTTTCCCTCTTGGACAAGCAGGTATGTCAATTTGAGGAACAATAGTTCAAAAGGCCAAAAAGAAAGTACCACTGTGTGATTCACTGGTCTGTTTGTTGCAGTGCTATTCAACTTTGTCCTTGGATCTGAATTAAATAGAGCATATCATGTTATAACGGAATCCAGTGGGTGGAATTTAATAAATGAAGGATGAAAAGAATATATTCCATCTTAAACCACTTCTCTTGTCACAGAAGTGGCACTTGGATTGTATATGAACTTGATATCTCCAGATGGTCAGGTAGTTAGTAACCTATAGTGCTATCAGCTGAACTTCACCTTAACTAGTTACCATATGTTGGATTCTTCAAACAATGTATGTGTAAAAGTTGGATTATCAAAATGGGTTGTATGTCCCTTACTCTGATCCATTTGTCCATTTGACGGTGTACCGAGATTGTTTAGTAGAGCATTTCATTGGAAGTTTGAAACTCTGACAGCTCCTAATATTTCTATCCAGATTCTTTGTGTTGTCTAGATCTTTCTTTCTTTTAGGTCTTATCACAATTACTTTCTAATCACATCATTTCATTTTTCTTAGGTGCTTGTCAAGAAAATGCTTCTCATAGCCCAAAAATAGCAGATACTGGATATGAGTTTATCAACCGACCCATAGCTATGAGGCCTCTCTTTGACAGCATGTATCTGCAGCAATATGTTCTTCTTTGCTCTCAGGTGCTTAAATTTTCGAGAAAATATATTCTGAAGATCCCTGTTCACTCTTGCATGTCCCTTGCTTTGGTGTAGGATTGTAATGCATATGCACAGCAGCACAAGCTGGAAAATAAGGGATGAAGAAAAAATCTCAAGAAAATTATAATCGTATAAGAAGCTAAGATTTTGTTTATAAAATTTGTAACATCACTGAAAATGCATATGAGAAACTGGTTTATTTGAGCTTCTAGGCCCTACATAGTTTAAAGAAATAAGTAAATTATATCGGGTTTCTCTCCTAATCTCGTCTGAAGATGGAATTGTTGTCTGATTTTGGAGCATCACTAAAACCACACCGTTCTTGTTAGAACATCTTGAATATCATTCATCTGCTGGGCATCATTATTTCTCCATTAACATATAAATTCAAGAGCCTTTAAAAGGCATGTGTATTTGATATAATGTTCTTTTTTGAATTTGTTGGCAACATGAAGTCGTGTACTAATCATCCTCTTAATTGGTGTTGGATTCAACAGCTTTATTTTGCATTCTTTTCATAATCAGAGTTCAATTTTCTTGTGTATAATTGGTAACTATTTATTCATTCTTCCAAGGGAAAAAGAAAGTTAAGTGGGTTTTAAATATTCTATATCAGATGCTGCGACTCACCAAGATATTAGTGTTTAGTTTCTTTTGGCAGTTTGTTATTCCTGTTTCTATTGCTTTTATATCTTTTTCAAGATTCTAATATATCATGTTGTGGATGTAGATTGAAGTTGGTGGTTTCAGAGACAAACCTGGGAAGGGTAGAGACTACTACCATACCTGTTACTGTTTAAGTGGTCTTTCAATTGCTCAGTATAGCTGGACCGACGAAGCTGATTCTCCACCATTACCCAGGGATGTATTTGGTCCTTATTCCAAATGTCTGTTGGAACAGGTTCACCCACTCTTCAACGTAGTGTTGGATCGGTATTATGAAGCTCGCGAATACTTCTCAGGCTTGTGAGACTGTTTCACCACTTTCATTAGCACCAACTTTTTCAGAAACTTAGTTGCAATCCAGAAGTTAAAAGTGTCATTGGGTTCAAAAGAGTTGTGATCGTTTATGTACAATATCCTTGCATTTGTATACGTGATACAAGTTGAGAGAATAACGGGTACTTTCTGAACTTGCTGAACTAGCAC-TAAATTCGTCTCT-GTTTAGTGAGGTCTGTAAACATCAATGTGAAATTGCGAGATATGCATGTAATAGTGGCTAAGATTTACAAATCTGGATACCGGTTATTAGTGATCAGAAATTTCATTCAATTTCCCAAACGGTCACCTAAGTTTAGGATATTGCTTTAAAATATTATTTATTTTTCATTTAAG-ATCAAA</genome_strand>
        <mrna_strand>GTAAACGAGCGTTGATTTGTCGCTGACGAAATTTACAGTCAAGAGTAGTAACCGGTTGTAGTGAAAAAATGGAGTCGAGGAAAGTGACGAAGACGCTGGAAGATCAATGGGTGGTGGAGCGTCGAGTCCGAGAGATATACGATTATTTCTACAGCATTTCCCCCAACTCTCCGTCCGACCT.......................................................................................................CATAGAGATCGAACGTGACAAACACTTCGGTTATCTAAGCCAAGGTCTCAGAAAACTTGGTCCGTCGTTTTCCGTTTTGGATGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACCATGGCTTTGCTACTGGACACTTCATTCAATCGCTTTGTTGGGAGAATCTATTGGTGGCAAACTGGAAAATGATGCAATTGACTTTCTGACCCGTTGCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAAGATGGTGGCTATGGAGGTGGACCTGGTCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCTCATCTTGCAACTACTTATGCTGCAGTCAATTCACTAATAACTTTGGGCAAACCTGAAGCTCTGTCATCAATTAATAG.................................................................................AGAAAAGTTGTACACATTTTTGCTGCGAATGAAAGACGCAAGTGGTGGATTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCACGATGGTGGAGAAGTAGATGTTCGTGCCTGTTATACTGCCATTTCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAAATATATTAAACATTGTGGATGACGAGCTGATTCATGGTGTTGGAAATTACATCCTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTCAGACTTATGAAGGTGGAATTGCTGGCGAACCAGGTTCTGAAGCTCATGGTGG......................................................................................................................................................GTATACTTTCTGTGGGTTGGCTGCAATGATTCTGATCAACGAAGTAGATCGATTGGACTTGCCAGGTTTAATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGGGTGGTATTTAGACAAGGGGTCGAAGGTGGATTTCAAGGCAGGACAAATAAATTAGTCGATGGCTGCTATTCCTTTTGGCAG......................................................................................GGCGCGGTAGTGTTTCTTATACAAAGACTAAATTTGATAGTCCATGAACAACTAGGGCTGTCAAATGACCTCAGTACAGAAAGTGCTGATGATTCTTCAGAGTCAGAGTTATCTGATGAAGAAGAGCATTTGGAAGGGATATCCTCTCATGTTCAGGATACTTTCCCTCTTGGACAAGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTTGTCAAGAAAATGCTTCTCATAGCCCAAAAATAGCAGATACTGGATATGAGTTTATCAACCGACCCATAGCTATGAGGCCTCTCTTTGACAGCATGTATCTGCAGCAATATGTTCTTCTTTGCTCTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAAGTTGGTGGTTTCAGAGACAAACCTGGGAAGGGTAGAGACTACTACCATACCTGTTACTGTTTAAGTGGTCTTTCAATTGCTCAGTATAGCTGGACCGACGAAGCTGATTCTACACCATTACCCAGGGATGTATTTGGTCCTTATTCCAAATGTCTGTTGGAACAGGTTCACCCACTCTTCAACGTAGTGTTGGATCGGTATTATGAAGCTCGCGAATAC-TCTCAGGCTTGTGAGACTGTTTCACCACTTTCATTAGCACCAACTTTTTCAGAAACTTAGTTGCAATCCAGAAGTTAAAAGTGTCATTGGGTTCAAAAGAGTTGTGATCGTTTATGTAC-ATATCCTTGCATTTGTATACGTGATACAAGTTGAGAGAATAACGGGTACTTTCTGAACTTGCTGAACTAGCACGTAAATTCGTCTCTGGTTTAGTGAGGTCTGTAAACATCAATGTGAAATTGCGAGATATGCATGTAATAGTGGCTAAGATTTACAAATCTGGATACCGGTTATTAGTGATCAGAAATTTCATTCAATTTCCCAAACGGTCACCTAAGTTTAGGATATTGCTTTAAAATATTATTTATTTTTCATTTAAGAATCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E301063" ref_strand="+" ref_description="SGN-E301063 [cLEW-22-H17]">
      <seq>agggtcaagagtagtaaccggttgtagtgaaaaaatggagtcgaggaaagtgacgaagacgctggaagatcaatgggtggtggagcgtcgagtccgagagatatacgattatttctacagcatttcccccaactctccgtccgacctcatagagatcgaacgtgacaaacacttcggttatctaagccaaggtctcagaaaacttggtccgtcgttttccgttttggatgccagtcgaccatggctttgctactggacacttcattcaatcgctttgttgggagaatctattggtggcaaactggaaaatgatgcaattgactttctgacccgttgccaggataaagatggtggctatggaggtggacctggtcagatgcctcatcttgcaactacttatgctgcagtcaattcactaataactttgggcaaacctgaagctctgtcatcaattaatagagaaaagttgtacacatttttgctgcgaatgaaagacgcaagtggtggattcaggatgcacgatggtggagaagtagatgttcgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="88362" stop="93115"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88659" g_stop="88805" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="147" r_length="147" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88806" i_stop="88908" i_length="103">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88909" g_stop="88995" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="234" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88996" i_stop="90176" i_length="1181">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.593" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90177" g_stop="90282" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="340" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="90283" i_stop="91406" i_length="1124">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="91407" g_stop="91442" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="376" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="91443" i_stop="92081" i_length="639">
            <donor d_prob="0.894" d_score="0.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="92082" g_stop="92164" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="459" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="92165" i_stop="92245" i_length="81">
            <donor d_prob="0.533" d_score="1.00"/>
            <acceptor a_prob="0.738" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="92246" g_stop="92299" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="460" r_stop="513" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="92300" i_stop="92784" i_length="485">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="92785" g_stop="92815" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="544" r_length="31" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E301063" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>544</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E301063" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88659" e_stop="88805"/>
          <exon e_start="88909" e_stop="88995"/>
          <exon e_start="90177" e_stop="90282"/>
          <exon e_start="91407" e_stop="91442"/>
          <exon e_start="92082" e_stop="92164"/>
          <exon e_start="92246" e_stop="92299"/>
          <exon e_start="92785" e_stop="92815"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGTCAAGAGTAGTAACCGGTTGTAGTGAAAAAATGGAGTCGAGGAAAGTGACGAAGACGCTGGAAGATCAATGGGTGGTGGAGCGTCGAGTCCGAGAGATATACGATTATTTCTACAGCATTTCCCCCAACTCTCCGTCCGACCTGTTAGCTCTCAACCTTTTTCAATTTCTAGGGTTCTTATTCCTTTATTCATCAACTTATTTTTGTGTTGATTTCTTTCTTTCTTTCTTTCTTTCTGTTATAAAGCATAGAGATCGAACGTGACAAACACTTCGGTTATCTAAGCCAAGGTCTCAGAAAACTTGGTCCGTCGTTTTCCGTTTTGGATGCCAGGTAAGTTCCCTCTATCTTTGATCGTTTCTCACCACTAGTTCACTTGTGATGTTGAAGATTCCAATTTTAACTGGTGGCTAATTGGAAAACAAAATTAAAATTTCGTATTATGAATTCAATGTGCTTTAAAAGGAAAATTATTTAGTATTGGAATGGAATTGACTTGAATGAAGTAATGTCTTAGTTAATATAACTTTATATAGCTGATCTCAACTTATTTGGGAGCTAGTCTATTGATTGATTGAGTGACTTTTTAGGAAGAAAAGAACATTGTTTGCAAGATTCAATCGTAATGAGAGAGTTGAGATTCTATGGTAACGAGAGGAAAGAACTAAACAAGCTAACGTGGATGAATATTGACCTTCAAATAAACTCTCTCCAAGCATCCACCCAAGAGTGCAGTCTAGTGGTTAATGAACTAGGTCGAGAATCACGAGGTCTCAAATTCAAAGGCAAAAGGTTAGGTGAGTTCTTCCCAAGTTCTTATACTGTCCATGTATTGAGGGACAGAGTTACCCACTATCTATGCTAGTGGGAGGTAGGACGTACCACGTGGAAATAATCGAGTTGAGCACTCCATAGTTACAAAAAATAAAAATAAAGCTCTCTCCAATGATTAGTTACATACAACATATTTGGATTGGTATAAGTTTCATAATGACTAATCTTGTCAGTGTAGGACACACTAAGGTTTTCTTCTTTTCCATTTTCTCGTGGGGGATCACAATGTTGTCCAACCAACTTGCTCATACCTCGACTAATGGATTGAAACATGCTATCTCTCACTAGCACATGTGCTATCTACCATGGGGTTTGGAACTTTGGTGTATCAGGTTCATCTGAACCCAATAAAATTCAATGTTGGGCATAAATCTGTGTGTAAATTTTTCATGGAATTACAATAAATAGTATATATGAAAGCATAAATTTTATAAATATAATGGGTTCAACAATAAAACTTGAGGGGAAGAATTCTGTGGTCTCCCATTCCCAATGTCCATTCAAACTTCATTAAGTCATGCCCTTTGGTTCCCTTTCCCATACCTCACCAACATAATATAAAAGTTTGGAAAATGTGTTCATCAAGATGGGATCTTGGCGTCTATTCTAGTCCAATGGAACCAAAGGCTATTTTGTTAACATCAACTATTTCTATGCCTTACTTAAGTTTTTCTTTCTAGTCGACCATGGCTTTGCTACTGGACACTTCATTCAATCGCTTTGTTGGGAGAATCTATTGGTGGCAAACTGGAAAATGATGCAATTGACTTTCTGACCCGTTGCCAGGTTTGTTCATTTTGTATTCTGCTGGTTATGTATCTATGTCTTTCTTTAAAAAGAATTGTGTAGGGATTTAGTGTATTTGTTTTTAGGGTGGGTTCAGAGCAAGCTAATAGGATCACTTTCACTGAGGAAAACTTATGTGTAATGAATCACCTTTTTTGTTTGTTTTAGGACCATACTGTGCTACAAGAGCATGATATATATAACAGCAGGCTTTTTTTTACATATTGAGCAGGAGTTTCTTGTGGTGATAAAAGTGAGTTTGAAGCATTAAACTTAGAGAAATTGTTTTACCTCCCAGATTTTGAAGTTAAAACCTGAAAATTTGAGTTTTTGAAATTGTGATTTTTGGAACTTGAAGTTGTGCTTATACATGCATATTACTTGGAAAATTTGAAACTTTTGTGAGTAAAAGTGAATTTCTCCCAAAACTGGTCTGGACCAGCTTTTGGAACTTGATATTTTTTTGAAGACAGATTTTCAAAATTTGATTGAATATCTATGGCCAAACAGATATTTTAAGACAAGTGTTCTAAGCAGAAAAGGCTACTACTAAAGTACATGCTATATTCTAAGTGCCCAGTTACGTCTTGCTTAGGGATGACAACTTTAATAGGCTTCAGCTACTGTACAAAACTCAAGTCTCTGTAGACTTCTCAAAGATATGGTAGACTTTATAACAAACTTCAAGAGGCTTTCCACCAAGGACTTTATTGTGGTTCTTATGAACTAAAATTGGGACTACTTGTATTCATCTCTGTACTATTGCTTAGACATTGTAATCATAAAGAGTTATAGACCAGTGCGCATGATTGATTGTGTTTAGGAGTGACTAATAATGATGCATGGAGAAAAGATTCCGTAGTGATATTCGAGCCTAGTTATAGAAATGTGATATACATGGTGAGTAGAATGTCATCCCAAATTATTGTTATTACCATATTTGCTTAAAAGATAATTTATTGTATTTATGATATGTTTAATCATCCACCTTTCCAGAATACTGGTGTAACTGTCCTTTTTTTTTTCTTGCCTGCGATTCTAGCTAATTTGTTTTTGGACTTCTCGTTCAATAAAATGCGGTAAGATTTAGTTTCATGTGTTGTTTACTGTTACCTTCCTCACAGGATAAAGATGGTGGCTATGGAGGTGGACCTGGTCAGGCAAGTCAAATTCTCCCACTCCAGTCTTAGTGCCGTTAAATCAGATTTGTGTCAGATTCTTCATGCTTATTTTCACATTGAGTTTGATTATCTGATGTCTTCAATTGTTTTTAATATGCAGTATGCTGCTTTATTTTGTGATGATGGTTGATTTGAATATTGTAAATTTGTTAACTCTATAATTCTGTTGGAGGACTTATAATTAAAAGATAATTCTATTAGAGGGAAATAGTCATCTGTATTGATATGCATTTAACTATTGGCATGGTCAGTGGTTTGAGCTTGGGACTTCCACGTTGGAGGTATCCAGTTCGAAACGGAAACGCCTTGCCAGCGAAAGCAAGGGGTTTGCCTTCTGGGTCGAGCTCGCATGGTGCGAGTTACCTCTCCTATGTAGTTTGCGAGCTATTGCATAGGAGCGGGGTTTTACCCTTGTCATTAAAAAAAAAAAGACTATTGGCCTGGTTCTTGTTCTTTTATAAGTTAGCTTGAAACTCTTTTTCTGTTTCTTTTAGAATCACAAATTTAACAGTTCCAAGCTTCGTTTATTCTGGTCAACCTGTTAATTTTATACAGTTCTTGTGCTTCTTATCATTAAGGTTCTTTGAAGTAATACTTGTATTGTATTGCTTTTTTCAGATGCCTCATCTTGCAACTACTTATGCTGCAGTCAATTCACTAATAACTTTGGGCAAACCTGAAGCTCTGTCATCAATTAATAGGTGCACAAGCTATAGTATGTTTTTGTTGGTGTCTTATCTATTGTTCATTCCTGTTGACATTGATCTAGTAATATGCCTCAGAGAAAAGTTGTACACATTTTTGCTGCGAATGAAAGACGCAAGTGGTGGATTCAGGTAGGATGCTTTCTACTTGTTTACATTATTTGATCAGCTCCCCAATTCATGTCTTCCCTTGTATCTCATTCCTAGTCTGCTGTATTTATCTACTATCAGTTTCTAAAAAAAATCTAGGTGCTTTTCTTTCTATTTGTAACTTGTTTATCCATTTTAAATTTGCCATCTCTATGTTGTATGTGCTAATGTTTTCCATTACTACTGATTCTCCTGATTAATCCTACCTGCTAATTTTGTTATGTTTTCCTTCTGAGGAGAACTAGACTTTTGGGTGAACTAGCACTGTAGTTGACACTTTTACCCTGATCTGTAAATGTATAAATATTTGTGTGTGTATTCTTGAGTTTGTAGATCCAAGTGTATTTAACGAACAGCATCTGAGAGATCACTTGTTTCTAGCATTTTCTTTCAATATTCAAGTTTCCTCAAAAATGACTTGCCACTTCCCATCTTTGCTAAGTTCAAACTTCAAATATTATCTGCAGGATGCACGATGGTGGAGAAGTAGATGTTCGT</genome_strand>
        <mrna_strand>AGGGTCAAGAGTAGTAACCGGTTGTAGTGAAAAAATGGAGTCGAGGAAAGTGACGAAGACGCTGGAAGATCAATGGGTGGTGGAGCGTCGAGTCCGAGAGATATACGATTATTTCTACAGCATTTCCCCCAACTCTCCGTCCGACCT.......................................................................................................CATAGAGATCGAACGTGACAAACACTTCGGTTATCTAAGCCAAGGTCTCAGAAAACTTGGTCCGTCGTTTTCCGTTTTGGATGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACCATGGCTTTGCTACTGGACACTTCATTCAATCGCTTTGTTGGGAGAATCTATTGGTGGCAAACTGGAAAATGATGCAATTGACTTTCTGACCCGTTGCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAAGATGGTGGCTATGGAGGTGGACCTGGTCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCTCATCTTGCAACTACTTATGCTGCAGTCAATTCACTAATAACTTTGGGCAAACCTGAAGCTCTGTCATCAATTAATAG.................................................................................AGAAAAGTTGTACACATTTTTGCTGCGAATGAAAGACGCAAGTGGTGGATTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCACGATGGTGGAGAAGTAGATGTTCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E239516" ref_strand="+" ref_description="SGN-E239516 [cLED-23-L24]">
      <seq>tggagcgtcgagtccgagagatatacgattatttctacagcatttcccccaactctccgtccgacctcatagagatcgaacgtgacaaacacttcggttatctaagccaaggtctcagaaaacttggtccgtcgttttccgttttggatgccagtcgaccatggctttgctactggacacttcattcaatcgctttgttgggagaatctattggtggcaaactggaaaatgatgcaattgactttctgacccgttgccaggataaagatggtggctatggaggtggacctggtcagatgcctcatcttgcaactacttatgctgcagtcaattcactaataactttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="88439" stop="92433"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88739" g_stop="88805" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="67" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88806" i_stop="88908" i_length="103">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88909" g_stop="88995" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="154" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88996" i_stop="90176" i_length="1181">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.593" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90177" g_stop="90282" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="260" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="90283" i_stop="91406" i_length="1124">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="91407" g_stop="91442" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="296" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="91443" i_stop="92081" i_length="639">
            <donor d_prob="0.894" d_score="0.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="92082" g_stop="92133" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="348" r_length="52" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E239516" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>348</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E239516" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88739" e_stop="88805"/>
          <exon e_start="88909" e_stop="88995"/>
          <exon e_start="90177" e_stop="90282"/>
          <exon e_start="91407" e_stop="91442"/>
          <exon e_start="92082" e_stop="92133"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGCGTCGAGTCCGAGAGATATACGATTATTTCTACAGCATTTCCCCCAACTCTCCGTCCGACCTGTTAGCTCTCAACCTTTTTCAATTTCTAGGGTTCTTATTCCTTTATTCATCAACTTATTTTTGTGTTGATTTCTTTCTTTCTTTCTTTCTTTCTGTTATAAAGCATAGAGATCGAACGTGACAAACACTTCGGTTATCTAAGCCAAGGTCTCAGAAAACTTGGTCCGTCGTTTTCCGTTTTGGATGCCAGGTAAGTTCCCTCTATCTTTGATCGTTTCTCACCACTAGTTCACTTGTGATGTTGAAGATTCCAATTTTAACTGGTGGCTAATTGGAAAACAAAATTAAAATTTCGTATTATGAATTCAATGTGCTTTAAAAGGAAAATTATTTAGTATTGGAATGGAATTGACTTGAATGAAGTAATGTCTTAGTTAATATAACTTTATATAGCTGATCTCAACTTATTTGGGAGCTAGTCTATTGATTGATTGAGTGACTTTTTAGGAAGAAAAGAACATTGTTTGCAAGATTCAATCGTAATGAGAGAGTTGAGATTCTATGGTAACGAGAGGAAAGAACTAAACAAGCTAACGTGGATGAATATTGACCTTCAAATAAACTCTCTCCAAGCATCCACCCAAGAGTGCAGTCTAGTGGTTAATGAACTAGGTCGAGAATCACGAGGTCTCAAATTCAAAGGCAAAAGGTTAGGTGAGTTCTTCCCAAGTTCTTATACTGTCCATGTATTGAGGGACAGAGTTACCCACTATCTATGCTAGTGGGAGGTAGGACGTACCACGTGGAAATAATCGAGTTGAGCACTCCATAGTTACAAAAAATAAAAATAAAGCTCTCTCCAATGATTAGTTACATACAACATATTTGGATTGGTATAAGTTTCATAATGACTAATCTTGTCAGTGTAGGACACACTAAGGTTTTCTTCTTTTCCATTTTCTCGTGGGGGATCACAATGTTGTCCAACCAACTTGCTCATACCTCGACTAATGGATTGAAACATGCTATCTCTCACTAGCACATGTGCTATCTACCATGGGGTTTGGAACTTTGGTGTATCAGGTTCATCTGAACCCAATAAAATTCAATGTTGGGCATAAATCTGTGTGTAAATTTTTCATGGAATTACAATAAATAGTATATATGAAAGCATAAATTTTATAAATATAATGGGTTCAACAATAAAACTTGAGGGGAAGAATTCTGTGGTCTCCCATTCCCAATGTCCATTCAAACTTCATTAAGTCATGCCCTTTGGTTCCCTTTCCCATACCTCACCAACATAATATAAAAGTTTGGAAAATGTGTTCATCAAGATGGGATCTTGGCGTCTATTCTAGTCCAATGGAACCAAAGGCTATTTTGTTAACATCAACTATTTCTATGCCTTACTTAAGTTTTTCTTTCTAGTCGACCATGGCTTTGCTACTGGACACTTCATTCAATCGCTTTGTTGGGAGAATCTATTGGTGGCAAACTGGAAAATGATGCAATTGACTTTCTGACCCGTTGCCAGGTTTGTTCATTTTGTATTCTGCTGGTTATGTATCTATGTCTTTCTTTAAAAAGAATTGTGTAGGGATTTAGTGTATTTGTTTTTAGGGTGGGTTCAGAGCAAGCTAATAGGATCACTTTCACTGAGGAAAACTTATGTGTAATGAATCACCTTTTTTGTTTGTTTTAGGACCATACTGTGCTACAAGAGCATGATATATATAACAGCAGGCTTTTTTTTACATATTGAGCAGGAGTTTCTTGTGGTGATAAAAGTGAGTTTGAAGCATTAAACTTAGAGAAATTGTTTTACCTCCCAGATTTTGAAGTTAAAACCTGAAAATTTGAGTTTTTGAAATTGTGATTTTTGGAACTTGAAGTTGTGCTTATACATGCATATTACTTGGAAAATTTGAAACTTTTGTGAGTAAAAGTGAATTTCTCCCAAAACTGGTCTGGACCAGCTTTTGGAACTTGATATTTTTTTGAAGACAGATTTTCAAAATTTGATTGAATATCTATGGCCAAACAGATATTTTAAGACAAGTGTTCTAAGCAGAAAAGGCTACTACTAAAGTACATGCTATATTCTAAGTGCCCAGTTACGTCTTGCTTAGGGATGACAACTTTAATAGGCTTCAGCTACTGTACAAAACTCAAGTCTCTGTAGACTTCTCAAAGATATGGTAGACTTTATAACAAACTTCAAGAGGCTTTCCACCAAGGACTTTATTGTGGTTCTTATGAACTAAAATTGGGACTACTTGTATTCATCTCTGTACTATTGCTTAGACATTGTAATCATAAAGAGTTATAGACCAGTGCGCATGATTGATTGTGTTTAGGAGTGACTAATAATGATGCATGGAGAAAAGATTCCGTAGTGATATTCGAGCCTAGTTATAGAAATGTGATATACATGGTGAGTAGAATGTCATCCCAAATTATTGTTATTACCATATTTGCTTAAAAGATAATTTATTGTATTTATGATATGTTTAATCATCCACCTTTCCAGAATACTGGTGTAACTGTCCTTTTTTTTTTCTTGCCTGCGATTCTAGCTAATTTGTTTTTGGACTTCTCGTTCAATAAAATGCGGTAAGATTTAGTTTCATGTGTTGTTTACTGTTACCTTCCTCACAGGATAAAGATGGTGGCTATGGAGGTGGACCTGGTCAGGCAAGTCAAATTCTCCCACTCCAGTCTTAGTGCCGTTAAATCAGATTTGTGTCAGATTCTTCATGCTTATTTTCACATTGAGTTTGATTATCTGATGTCTTCAATTGTTTTTAATATGCAGTATGCTGCTTTATTTTGTGATGATGGTTGATTTGAATATTGTAAATTTGTTAACTCTATAATTCTGTTGGAGGACTTATAATTAAAAGATAATTCTATTAGAGGGAAATAGTCATCTGTATTGATATGCATTTAACTATTGGCATGGTCAGTGGTTTGAGCTTGGGACTTCCACGTTGGAGGTATCCAGTTCGAAACGGAAACGCCTTGCCAGCGAAAGCAAGGGGTTTGCCTTCTGGGTCGAGCTCGCATGGTGCGAGTTACCTCTCCTATGTAGTTTGCGAGCTATTGCATAGGAGCGGGGTTTTACCCTTGTCATTAAAAAAAAAAAGACTATTGGCCTGGTTCTTGTTCTTTTATAAGTTAGCTTGAAACTCTTTTTCTGTTTCTTTTAGAATCACAAATTTAACAGTTCCAAGCTTCGTTTATTCTGGTCAACCTGTTAATTTTATACAGTTCTTGTGCTTCTTATCATTAAGGTTCTTTGAAGTAATACTTGTATTGTATTGCTTTTTTCAGATGCCTCATCTTGCAACTACTTATGCTGCAGTCAATTCACTAATAACTTTGG</genome_strand>
        <mrna_strand>TGGAGCGTCGAGTCCGAGAGATATACGATTATTTCTACAGCATTTCCCCCAACTCTCCGTCCGACCT.......................................................................................................CATAGAGATCGAACGTGACAAACACTTCGGTTATCTAAGCCAAGGTCTCAGAAAACTTGGTCCGTCGTTTTCCGTTTTGGATGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACCATGGCTTTGCTACTGGACACTTCATTCAATCGCTTTGTTGGGAGAATCTATTGGTGGCAAACTGGAAAATGATGCAATTGACTTTCTGACCCGTTGCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAAGATGGTGGCTATGGAGGTGGACCTGGTCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCTCATCTTGCAACTACTTATGCTGCAGTCAATTCACTAATAACTTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E698492" ref_strand="+" ref_description="SGN-E698492 [FA06CB05]">
      <seq>ccggtcgaaggtggatttcaaggcaggacaaataaattagtcgatggctgctattccttttggcagggcgcggtagtgtttcttatacaaagactaaatttgatagtccatgaacaactagggctgtcaaatgacctcagtacagaaagtgctgatgattcttcagagtcagagttatctgatgaagaagagcatttggaagggatatcctctcatgttcaggatactttccctcttggacaagcaggtgcttgtcaagaaaatgcttctcatagcccaaaaatagcagatactggatatgagtttatcaaccgacccatagctatgaggcctctctttgacagcatgtatctgcagcaatatgttcttctttgctctcagattgaagttggtggtttcagagacaaacctgggaagggtagagactactaccatacctgttactgtttaagtggtctttcaattgctcagtatagctggaccgacgaagctgattctccaccattacccagggatgtatttggtccttattccaaatgtctgttggaacaggttcacccactcttcaacgtagtgttggatcggtattatgaagctcgcgaatacttctcaggcttgtgagactgtttcaccactttcattagcaccaactttttcagaaacttagttgcaatccagaagttaaaagtgtcattgggttcaaaagagttgtgatcgtttatgtacaatatccttgcatttgtatacgtgatacaagttgagagaataacgggtactttctgaacttgctgaactagcactaaattcgtctctgtttagtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="98018" stop="100830"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98316" g_stop="98381" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98382" i_stop="98467" i_length="86">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.919" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98468" g_stop="98648" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="247" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98649" i_stop="99207" i_length="559">
            <donor d_prob="0.776" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="99208" g_stop="99341" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="381" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="99342" i_stop="100089" i_length="748">
            <donor d_prob="0.816" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="100090" g_stop="100530" g_length="441"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="822" r_length="441" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E698492" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>822</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E698492" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98316" e_stop="98381"/>
          <exon e_start="98468" e_stop="98648"/>
          <exon e_start="99208" e_stop="99341"/>
          <exon e_start="100090" e_stop="100530"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGGTCGAAGGTGGATTTCAAGGCAGGACAAATAAATTAGTCGATGGCTGCTATTCCTTTTGGCAGGTGACTACCAGTTTTACCTTTATGTCCTGAACTCTTCCATTTCCAGTTTAATTATTACTGAGCTAAAGATGACTTTGATTGATCAGGGCGCGGTAGTGTTTCTTATACAAAGACTAAATTTGATAGTCCATGAACAACTAGGGCTGTCAAATGACCTCAGTACAGAAAGTGCTGATGATTCTTCAGAGTCAGAGTTATCTGATGAAGAAGAGCATTTGGAAGGGATATCCTCTCATGTTCAGGATACTTTCCCTCTTGGACAAGCAGGTATGTCAATTTGAGGAACAATAGTTCAAAAGGCCAAAAAGAAAGTACCACTGTGTGATTCACTGGTCTGTTTGTTGCAGTGCTATTCAACTTTGTCCTTGGATCTGAATTAAATAGAGCATATCATGTTATAACGGAATCCAGTGGGTGGAATTTAATAAATGAAGGATGAAAAGAATATATTCCATCTTAAACCACTTCTCTTGTCACAGAAGTGGCACTTGGATTGTATATGAACTTGATATCTCCAGATGGTCAGGTAGTTAGTAACCTATAGTGCTATCAGCTGAACTTCACCTTAACTAGTTACCATATGTTGGATTCTTCAAACAATGTATGTGTAAAAGTTGGATTATCAAAATGGGTTGTATGTCCCTTACTCTGATCCATTTGTCCATTTGACGGTGTACCGAGATTGTTTAGTAGAGCATTTCATTGGAAGTTTGAAACTCTGACAGCTCCTAATATTTCTATCCAGATTCTTTGTGTTGTCTAGATCTTTCTTTCTTTTAGGTCTTATCACAATTACTTTCTAATCACATCATTTCATTTTTCTTAGGTGCTTGTCAAGAAAATGCTTCTCATAGCCCAAAAATAGCAGATACTGGATATGAGTTTATCAACCGACCCATAGCTATGAGGCCTCTCTTTGACAGCATGTATCTGCAGCAATATGTTCTTCTTTGCTCTCAGGTGCTTAAATTTTCGAGAAAATATATTCTGAAGATCCCTGTTCACTCTTGCATGTCCCTTGCTTTGGTGTAGGATTGTAATGCATATGCACAGCAGCACAAGCTGGAAAATAAGGGATGAAGAAAAAATCTCAAGAAAATTATAATCGTATAAGAAGCTAAGATTTTGTTTATAAAATTTGTAACATCACTGAAAATGCATATGAGAAACTGGTTTATTTGAGCTTCTAGGCCCTACATAGTTTAAAGAAATAAGTAAATTATATCGGGTTTCTCTCCTAATCTCGTCTGAAGATGGAATTGTTGTCTGATTTTGGAGCATCACTAAAACCACACCGTTCTTGTTAGAACATCTTGAATATCATTCATCTGCTGGGCATCATTATTTCTCCATTAACATATAAATTCAAGAGCCTTTAAAAGGCATGTGTATTTGATATAATGTTCTTTTTTGAATTTGTTGGCAACATGAAGTCGTGTACTAATCATCCTCTTAATTGGTGTTGGATTCAACAGCTTTATTTTGCATTCTTTTCATAATCAGAGTTCAATTTTCTTGTGTATAATTGGTAACTATTTATTCATTCTTCCAAGGGAAAAAGAAAGTTAAGTGGGTTTTAAATATTCTATATCAGATGCTGCGACTCACCAAGATATTAGTGTTTAGTTTCTTTTGGCAGTTTGTTATTCCTGTTTCTATTGCTTTTATATCTTTTTCAAGATTCTAATATATCATGTTGTGGATGTAGATTGAAGTTGGTGGTTTCAGAGACAAACCTGGGAAGGGTAGAGACTACTACCATACCTGTTACTGTTTAAGTGGTCTTTCAATTGCTCAGTATAGCTGGACCGACGAAGCTGATTCTCCACCATTACCCAGGGATGTATTTGGTCCTTATTCCAAATGTCTGTTGGAACAGGTTCACCCACTCTTCAACGTAGTGTTGGATCGGTATTATGAAGCTCGCGAATACTTCTCAGGCTTGTGAGACTGTTTCACCACTTTCATTAGCACCAACTTTTTCAGAAACTTAGTTGCAATCCAGAAGTTAAAAGTGTCATTGGGTTCAAAAGAGTTGTGATCGTTTATGTACAATATCCTTGCATTTGTATACGTGATACAAGTTGAGAGAATAACGGGTACTTTCTGAACTTGCTGAACTAGCACTAAATTCGTCTCTGTTTAGTGA</genome_strand>
        <mrna_strand>CCGGTCGAAGGTGGATTTCAAGGCAGGACAAATAAATTAGTCGATGGCTGCTATTCCTTTTGGCAG......................................................................................GGCGCGGTAGTGTTTCTTATACAAAGACTAAATTTGATAGTCCATGAACAACTAGGGCTGTCAAATGACCTCAGTACAGAAAGTGCTGATGATTCTTCAGAGTCAGAGTTATCTGATGAAGAAGAGCATTTGGAAGGGATATCCTCTCATGTTCAGGATACTTTCCCTCTTGGACAAGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTTGTCAAGAAAATGCTTCTCATAGCCCAAAAATAGCAGATACTGGATATGAGTTTATCAACCGACCCATAGCTATGAGGCCTCTCTTTGACAGCATGTATCTGCAGCAATATGTTCTTCTTTGCTCTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAAGTTGGTGGTTTCAGAGACAAACCTGGGAAGGGTAGAGACTACTACCATACCTGTTACTGTTTAAGTGGTCTTTCAATTGCTCAGTATAGCTGGACCGACGAAGCTGATTCTCCACCATTACCCAGGGATGTATTTGGTCCTTATTCCAAATGTCTGTTGGAACAGGTTCACCCACTCTTCAACGTAGTGTTGGATCGGTATTATGAAGCTCGCGAATACTTCTCAGGCTTGTGAGACTGTTTCACCACTTTCATTAGCACCAACTTTTTCAGAAACTTAGTTGCAATCCAGAAGTTAAAAGTGTCATTGGGTTCAAAAGAGTTGTGATCGTTTATGTACAATATCCTTGCATTTGTATACGTGATACAAGTTGAGAGAATAACGGGTACTTTCTGAACTTGCTGAACTAGCACTAAATTCGTCTCTGTTTAGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E344965" ref_strand="+" ref_description="SGN-E344965 [cTOF-22-I4]">
      <seq>gtcgaaggtggatttcaaggcaggacaaataaattagtcgatggctgctattccttttggcagggcgcggtagtgtttcttatacaaagactaaatttgatagtccatgaacaactagggctgtcaaatgacctcagtacagaaagtgctgatgattcttcagagtcagagttatctgatgaagaagagcatttggaagggatatcctctcatgttcaggatactttccctcttggacaagcaggtgcttgtcaagaaaatgcttctcatagcccaaaaatagcagatactggatatgagtttatcaaccgacccatagctatgaggcctctctttgacagcatgtatctgcagcaatatgttcttctttgctctcagattgaagttggtggtttcagagacaaacctgggaagggtagagactactaccatacctgttactgtttaagtggtctttcaattgctcagtatagctggaccgacgaagctgattctccaccattacccagggatgtatttggtccttattccaaatgtctgttggaacaggttcacccactcttcaacgtagtgttggatcggtattatgaagctcgcgaatacttctcaggcttgtgagactgtttcaccactttcattagcaccaactttttcagaaacttagttgcaatccagaagttaaaagtgtcattgggttcaaaagagttgtgatcggttatgtacaatatccttgcatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="98019" stop="100750"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98319" g_stop="98381" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98382" i_stop="98467" i_length="86">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.919" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98468" g_stop="98648" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="244" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98649" i_stop="99207" i_length="559">
            <donor d_prob="0.776" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="99208" g_stop="99341" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="378" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="99342" i_stop="100089" i_length="748">
            <donor d_prob="0.816" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="100090" g_stop="100450" g_length="361"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="739" r_length="361" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E344965" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>739</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E344965" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98319" e_stop="98381"/>
          <exon e_start="98468" e_stop="98648"/>
          <exon e_start="99208" e_stop="99341"/>
          <exon e_start="100090" e_stop="100450"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCGAAGGTGGATTTCAAGGCAGGACAAATAAATTAGTCGATGGCTGCTATTCCTTTTGGCAGGTGACTACCAGTTTTACCTTTATGTCCTGAACTCTTCCATTTCCAGTTTAATTATTACTGAGCTAAAGATGACTTTGATTGATCAGGGCGCGGTAGTGTTTCTTATACAAAGACTAAATTTGATAGTCCATGAACAACTAGGGCTGTCAAATGACCTCAGTACAGAAAGTGCTGATGATTCTTCAGAGTCAGAGTTATCTGATGAAGAAGAGCATTTGGAAGGGATATCCTCTCATGTTCAGGATACTTTCCCTCTTGGACAAGCAGGTATGTCAATTTGAGGAACAATAGTTCAAAAGGCCAAAAAGAAAGTACCACTGTGTGATTCACTGGTCTGTTTGTTGCAGTGCTATTCAACTTTGTCCTTGGATCTGAATTAAATAGAGCATATCATGTTATAACGGAATCCAGTGGGTGGAATTTAATAAATGAAGGATGAAAAGAATATATTCCATCTTAAACCACTTCTCTTGTCACAGAAGTGGCACTTGGATTGTATATGAACTTGATATCTCCAGATGGTCAGGTAGTTAGTAACCTATAGTGCTATCAGCTGAACTTCACCTTAACTAGTTACCATATGTTGGATTCTTCAAACAATGTATGTGTAAAAGTTGGATTATCAAAATGGGTTGTATGTCCCTTACTCTGATCCATTTGTCCATTTGACGGTGTACCGAGATTGTTTAGTAGAGCATTTCATTGGAAGTTTGAAACTCTGACAGCTCCTAATATTTCTATCCAGATTCTTTGTGTTGTCTAGATCTTTCTTTCTTTTAGGTCTTATCACAATTACTTTCTAATCACATCATTTCATTTTTCTTAGGTGCTTGTCAAGAAAATGCTTCTCATAGCCCAAAAATAGCAGATACTGGATATGAGTTTATCAACCGACCCATAGCTATGAGGCCTCTCTTTGACAGCATGTATCTGCAGCAATATGTTCTTCTTTGCTCTCAGGTGCTTAAATTTTCGAGAAAATATATTCTGAAGATCCCTGTTCACTCTTGCATGTCCCTTGCTTTGGTGTAGGATTGTAATGCATATGCACAGCAGCACAAGCTGGAAAATAAGGGATGAAGAAAAAATCTCAAGAAAATTATAATCGTATAAGAAGCTAAGATTTTGTTTATAAAATTTGTAACATCACTGAAAATGCATATGAGAAACTGGTTTATTTGAGCTTCTAGGCCCTACATAGTTTAAAGAAATAAGTAAATTATATCGGGTTTCTCTCCTAATCTCGTCTGAAGATGGAATTGTTGTCTGATTTTGGAGCATCACTAAAACCACACCGTTCTTGTTAGAACATCTTGAATATCATTCATCTGCTGGGCATCATTATTTCTCCATTAACATATAAATTCAAGAGCCTTTAAAAGGCATGTGTATTTGATATAATGTTCTTTTTTGAATTTGTTGGCAACATGAAGTCGTGTACTAATCATCCTCTTAATTGGTGTTGGATTCAACAGCTTTATTTTGCATTCTTTTCATAATCAGAGTTCAATTTTCTTGTGTATAATTGGTAACTATTTATTCATTCTTCCAAGGGAAAAAGAAAGTTAAGTGGGTTTTAAATATTCTATATCAGATGCTGCGACTCACCAAGATATTAGTGTTTAGTTTCTTTTGGCAGTTTGTTATTCCTGTTTCTATTGCTTTTATATCTTTTTCAAGATTCTAATATATCATGTTGTGGATGTAGATTGAAGTTGGTGGTTTCAGAGACAAACCTGGGAAGGGTAGAGACTACTACCATACCTGTTACTGTTTAAGTGGTCTTTCAATTGCTCAGTATAGCTGGACCGACGAAGCTGATTCTCCACCATTACCCAGGGATGTATTTGGTCCTTATTCCAAATGTCTGTTGGAACAGGTTCACCCACTCTTCAACGTAGTGTTGGATCGGTATTATGAAGCTCGCGAATACTTCTCAGGCTTGTGAGACTGTTTCACCACTTTCATTAGCACCAACTTTTTCAGAAACTTAGTTGCAATCCAGAAGTTAAAAGTGTCATTGGGTTCAAAAGAGTTGTGATCGTTTATGTACAATATCCTTGCATTTG</genome_strand>
        <mrna_strand>GTCGAAGGTGGATTTCAAGGCAGGACAAATAAATTAGTCGATGGCTGCTATTCCTTTTGGCAG......................................................................................GGCGCGGTAGTGTTTCTTATACAAAGACTAAATTTGATAGTCCATGAACAACTAGGGCTGTCAAATGACCTCAGTACAGAAAGTGCTGATGATTCTTCAGAGTCAGAGTTATCTGATGAAGAAGAGCATTTGGAAGGGATATCCTCTCATGTTCAGGATACTTTCCCTCTTGGACAAGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTTGTCAAGAAAATGCTTCTCATAGCCCAAAAATAGCAGATACTGGATATGAGTTTATCAACCGACCCATAGCTATGAGGCCTCTCTTTGACAGCATGTATCTGCAGCAATATGTTCTTCTTTGCTCTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAAGTTGGTGGTTTCAGAGACAAACCTGGGAAGGGTAGAGACTACTACCATACCTGTTACTGTTTAAGTGGTCTTTCAATTGCTCAGTATAGCTGGACCGACGAAGCTGATTCTCCACCATTACCCAGGGATGTATTTGGTCCTTATTCCAAATGTCTGTTGGAACAGGTTCACCCACTCTTCAACGTAGTGTTGGATCGGTATTATGAAGCTCGCGAATACTTCTCAGGCTTGTGAGACTGTTTCACCACTTTCATTAGCACCAACTTTTTCAGAAACTTAGTTGCAATCCAGAAGTTAAAAGTGTCATTGGGTTCAAAAGAGTTGTGATCGGTTATGTACAATATCCTTGCATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E223291" ref_strand="+" ref_description="SGN-E223291 [cLEL-14-O4](-)">
      <seq>tacccagggatgtatttggtccttattccaaatgtctgttggaacaggttcacccactcttcaacgtagtgttggatcggtattatgaagctcgcgaatacttctcaggcttgtgagactgtttcaccactttcattagcaccaactttttcagaaacttagttgcaatccagaagttaaaagtgtcattgggttcaaagagttgtgatcgtttatgtgcaatatccttgcatttgtatacgtgatacaagttgagagaataacgggtactttctgaacttgctgaactagcactaaattcgtctctgtttagtgaggtctgtaaacatcaatgtgaaattgcgagatatgcatgtaatagtggctaacctttccaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="99914" stop="100892"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100214" g_stop="100577" g_length="364"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="363" r_length="363" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="376" polyA_stop="393"/>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E223291" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>364</cumulative_length_of_scored_exons>
        <coverage percentage="0.926" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E223291" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100214" e_stop="100577"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACCCAGGGATGTATTTGGTCCTTATTCCAAATGTCTGTTGGAACAGGTTCACCCACTCTTCAACGTAGTGTTGGATCGGTATTATGAAGCTCGCGAATACTTCTCAGGCTTGTGAGACTGTTTCACCACTTTCATTAGCACCAACTTTTTCAGAAACTTAGTTGCAATCCAGAAGTTAAAAGTGTCATTGGGTTCAAAAGAGTTGTGATCGTTTATGTACAATATCCTTGCATTTGTATACGTGATACAAGTTGAGAGAATAACGGGTACTTTCTGAACTTGCTGAACTAGCACTAAATTCGTCTCTGTTTAGTGAGGTCTGTAAACATCAATGTGAAATTGCGAGATATGCATGTAATAGTG</genome_strand>
        <mrna_strand>TACCCAGGGATGTATTTGGTCCTTATTCCAAATGTCTGTTGGAACAGGTTCACCCACTCTTCAACGTAGTGTTGGATCGGTATTATGAAGCTCGCGAATACTTCTCAGGCTTGTGAGACTGTTTCACCACTTTCATTAGCACCAACTTTTTCAGAAACTTAGTTGCAATCCAGAAGTTAAAAGTGTCATTGGGTTC-AAAGAGTTGTGATCGTTTATGTGCAATATCCTTGCATTTGTATACGTGATACAAGTTGAGAGAATAACGGGTACTTTCTGAACTTGCTGAACTAGCACTAAATTCGTCTCTGTTTAGTGAGGTCTGTAAACATCAATGTGAAATTGCGAGATATGCATGTAATAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E223058" ref_strand="+" ref_description="SGN-E223058 [cLEL-14-O4](-)">
      <seq>acgtagtgttggatcggtattatgaagctcgcgaatacttctcaggcttgtgagactgtttcaccactttcattagcaccagctttttcagaaacttagttgcaatccagaagttaaaagtgtcattgggttcaaagagttgtgatcgtttatgtacaatatccttgcatttgtatacgtgatacaagttgagagaataacgggtactttctgaacttgctgaactagcactaaattcgtctctgtttagtgaggtctgtaagcatcaatgtgaaattgcgacatatgcatgtaatagtggctaagatttcaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="99977" stop="100892"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100277" g_stop="100577" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="300" r_length="300" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="312" polyA_stop="330"/>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E223058" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>301</cumulative_length_of_scored_exons>
        <coverage percentage="0.912" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E223058" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100277" e_stop="100577"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGTAGTGTTGGATCGGTATTATGAAGCTCGCGAATACTTCTCAGGCTTGTGAGACTGTTTCACCACTTTCATTAGCACCAACTTTTTCAGAAACTTAGTTGCAATCCAGAAGTTAAAAGTGTCATTGGGTTCAAAAGAGTTGTGATCGTTTATGTACAATATCCTTGCATTTGTATACGTGATACAAGTTGAGAGAATAACGGGTACTTTCTGAACTTGCTGAACTAGCACTAAATTCGTCTCTGTTTAGTGAGGTCTGTAAACATCAATGTGAAATTGCGAGATATGCATGTAATAGTG</genome_strand>
        <mrna_strand>ACGTAGTGTTGGATCGGTATTATGAAGCTCGCGAATACTTCTCAGGCTTGTGAGACTGTTTCACCACTTTCATTAGCACCAGCTTTTTCAGAAACTTAGTTGCAATCCAGAAGTTAAAAGTGTCATTGGGTTC-AAAGAGTTGTGATCGTTTATGTACAATATCCTTGCATTTGTATACGTGATACAAGTTGAGAGAATAACGGGTACTTTCTGAACTTGCTGAACTAGCACTAAATTCGTCTCTGTTTAGTGAGGTCTGTAAGCATCAATGTGAAATTGCGACATATGCATGTAATAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E314807" ref_strand="+" ref_description="SGN-E314807 [cTOA-20-L23]">
      <seq>gaaagtggaaaccgccaaaactatcattatcgcagagacctcatctttcaacttccattcattattctattttccgtttcactccattttcatacacccaatcccatttttgtagcagcagtgttctgtttcttcttcatggaattgaatcataccaagcagactctgcaaacggctatggagaatgaacagcagcatctctccctctctgaatcagattctactgattctgaacctgagaaagctattactttctcctccccagctcgttttcatagcggctccgattctgatcattccactaagttccaaacagataaagctactaatccctctaccgtcaatggcgattctactaaggcgcaatctcagccgaggtcatcaatttcctccgattcagatgattttagtaagtgtggagaacataaagttagtaagattgattctactactgctactgttaatagagattctacagctactaaagtatcttcaccgccggtggaatctccgccgaggtcgtcaatttcctctgatcaaatttctcttcctcatgagtccttaaatatggaggatactaagccttctgcagctccgacggggagtccgccggaaaaacctccaataccggaagcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="100934" stop="102169"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101234" g_stop="101869" g_length="636"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="636" r_length="636" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E314807" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>636</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E314807" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101234" e_stop="101869"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGTGGAAACCGCCAAAACTATCATTATCGCAGAGACCTCATCTTTCAACTTCCATTCATTATTCTATTTTCCGTTTCACTCCATTTTCATACACCCAATCCCATTTTTGTAGCAGCAGTGTTCTGTTTCTTCTTCATGGAATTGAATCATACCAAGCAGACTCTGCAAACGGCTATGGAGAATGAACAGCAGCATCTCTCCCTCTCTGAATCAGATTCTACTGATTCTGAACCTGAGAAAGCTATTACTTTCTCCTCCCCAGCTCGTTTTCATAGCGGCTCCGATTCTGATCATTCCACTAAGTTCCAAACAGATAAAGCTACTAATCCCTCTACCGTCAATGGCGATTCTACTAAGGCGCAATCTCAGCCGAGGTCATCAATTTCCTCCGATTCAGATGATTTTAGTAAGTGTGGAGAACATAAAGTTAGTAAGATTGATTCTACTACTGCTACTGTTAATAGAGATTCTACAGCTACTAAAGTATCTTCACCGCCGGTGGAATCTCCGCCGAGGTCGTCAATTTCCTCTGATCAAATTTCTCTTCCTCATGAGTCCTTAAATATGGAGGATACTAAGCCTTCTGCAGCTCCGACGGGGAGTCCGCCGGAAAAACCTCCAATACCGGAAGCG</genome_strand>
        <mrna_strand>GAAAGTGGAAACCGCCAAAACTATCATTATCGCAGAGACCTCATCTTTCAACTTCCATTCATTATTCTATTTTCCGTTTCACTCCATTTTCATACACCCAATCCCATTTTTGTAGCAGCAGTGTTCTGTTTCTTCTTCATGGAATTGAATCATACCAAGCAGACTCTGCAAACGGCTATGGAGAATGAACAGCAGCATCTCTCCCTCTCTGAATCAGATTCTACTGATTCTGAACCTGAGAAAGCTATTACTTTCTCCTCCCCAGCTCGTTTTCATAGCGGCTCCGATTCTGATCATTCCACTAAGTTCCAAACAGATAAAGCTACTAATCCCTCTACCGTCAATGGCGATTCTACTAAGGCGCAATCTCAGCCGAGGTCATCAATTTCCTCCGATTCAGATGATTTTAGTAAGTGTGGAGAACATAAAGTTAGTAAGATTGATTCTACTACTGCTACTGTTAATAGAGATTCTACAGCTACTAAAGTATCTTCACCGCCGGTGGAATCTCCGCCGAGGTCGTCAATTTCCTCTGATCAAATTTCTCTTCCTCATGAGTCCTTAAATATGGAGGATACTAAGCCTTCTGCAGCTCCGACGGGGAGTCCGCCGGAAAAACCTCCAATACCGGAAGCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E345006" ref_strand="+" ref_description="SGN-E345006 [cTOF-22-H21]">
      <seq>ccaaaactatcattatcgcagagacctcatctttcaacttccattcattattctattttccgtttcactccattttcatacacccaatcccatttttgtagcagcagtgttctgtttcttcttcatggaattgaatcataccaagcagactctgcaaacggctatggagaatgaacagcagcatctctccctctctgaatcagattctactgattctgaacctgagaaagctattactttctcctccccagctcgttttcatagcggctccgattctgatcattccactaagttccaaacagataaagctactaatccctctaccgtcaatggcgattctactaaggcgcaatctcagccgaggtcatcaatttcctccgattcagatgattttagtaagtgtggagaacataaagttagtaagattgattctactactgctactgttaatagagattctacagctactaaagtatcttcaccgccggtggaatctccgccgaggtcgtcaatttcctctgatcaaatttctcttcctcatgagtccttaaatatggaggatactaagccttctgcagctccgacggggagtccgccggaaaaacctccaataccggaagcggtggtgaagaagtttatcaaggaggagccactggctttggtgaaagcggatctgtttgtcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="100948" stop="102231"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101248" g_stop="101931" g_length="684"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="684" r_length="684" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E345006" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>684</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E345006" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101248" e_stop="101931"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAAACTATCATTATCGCAGAGACCTCATCTTTCAACTTCCATTCATTATTCTATTTTCCGTTTCACTCCATTTTCATACACCCAATCCCATTTTTGTAGCAGCAGTGTTCTGTTTCTTCTTCATGGAATTGAATCATACCAAGCAGACTCTGCAAACGGCTATGGAGAATGAACAGCAGCATCTCTCCCTCTCTGAATCAGATTCTACTGATTCTGAACCTGAGAAAGCTATTACTTTCTCCTCCCCAGCTCGTTTTCATAGCGGCTCCGATTCTGATCATTCCACTAAGTTCCAAACAGATAAAGCTACTAATCCCTCTACCGTCAATGGCGATTCTACTAAGGCGCAATCTCAGCCGAGGTCATCAATTTCCTCCGATTCAGATGATTTTAGTAAGTGTGGAGAACATAAAGTTAGTAAGATTGATTCTACTACTGCTACTGTTAATAGAGATTCTACAGCTACTAAAGTATCTTCACCGCCGGTGGAATCTCCGCCGAGGTCGTCAATTTCCTCTGATCAAATTTCTCTTCCTCATGAGTCCTTAAATATGGAGGATACTAAGCCTTCTGCAGCTCCGACGGGGAGTCCGCCGGAAAAACCTCCAATACCGGAAGCGGTGGTGAAGAAGTTTATCAAGGAGGAGCCACTGGCTTTGGTGAAAGCGGATCTGTTTGTCGG</genome_strand>
        <mrna_strand>CCAAAACTATCATTATCGCAGAGACCTCATCTTTCAACTTCCATTCATTATTCTATTTTCCGTTTCACTCCATTTTCATACACCCAATCCCATTTTTGTAGCAGCAGTGTTCTGTTTCTTCTTCATGGAATTGAATCATACCAAGCAGACTCTGCAAACGGCTATGGAGAATGAACAGCAGCATCTCTCCCTCTCTGAATCAGATTCTACTGATTCTGAACCTGAGAAAGCTATTACTTTCTCCTCCCCAGCTCGTTTTCATAGCGGCTCCGATTCTGATCATTCCACTAAGTTCCAAACAGATAAAGCTACTAATCCCTCTACCGTCAATGGCGATTCTACTAAGGCGCAATCTCAGCCGAGGTCATCAATTTCCTCCGATTCAGATGATTTTAGTAAGTGTGGAGAACATAAAGTTAGTAAGATTGATTCTACTACTGCTACTGTTAATAGAGATTCTACAGCTACTAAAGTATCTTCACCGCCGGTGGAATCTCCGCCGAGGTCGTCAATTTCCTCTGATCAAATTTCTCTTCCTCATGAGTCCTTAAATATGGAGGATACTAAGCCTTCTGCAGCTCCGACGGGGAGTCCGCCGGAAAAACCTCCAATACCGGAAGCGGTGGTGAAGAAGTTTATCAAGGAGGAGCCACTGGCTTTGGTGAAAGCGGATCTGTTTGTCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E728818" ref_strand="+" ref_description="SGN-E728818 [LA19AC01]">
      <seq>cccaatccctttttgtagcagcagtgttctgtttcttgcttcatggaattgaatcataccaagcagactctgcaaacggctatggagaatgaacagcagcatctctccctctctgaatcagattctactgattctgaacctgagaaagctattactttctcctccccagctcgttttcatagcggctccgattctgatcattccactaagttccaaacagataaagctactaatccctctaccgtcaatggcgattctactaaggcgcaatctcagccgaggtcatcaatttcctccgattcagatgattttagtaagtgtggagaacataaagttagtaagattgattctactactgctactgttaatagagattctacagctactaaagtatcttcaccgccggtggaatctccgccgaggtcgtcaatttcctctgatcaaatttctcttcctcatgagtccttaaatatggaggatactaagccttctgcagctccgacggggagtccgccggaaaaacctccaataccggaagcggtggtgaagaagtttatcaaggaggagccactggctttggtgaaagtggatctgtttgtcggacatggtacagctagtattaaggaaggtgattacagcggcaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="101030" stop="102274"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101330" g_stop="101974" g_length="645"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="645" r_length="645" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E728818" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>645</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E728818" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101330" e_stop="101974"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCAATCCCATTTTTGTAGCAGCAGTGTTCTGTTTCTT-CTTCATGGAATTGAATCATACCAAGCAGACTCTGCAAACGGCTATGGAGAATGAACAGCAGCATCTCTCCCTCTCTGAATCAGATTCTACTGATTCTGAACCTGAGAAAGCTATTACTTTCTCCTCCCCAGCTCGTTTTCATAGCGGCTCCGATTCTGATCATTCCACTAAGTTCCAAACAGATAAAGCTACTAATCCCTCTACCGTCAATGGCGATTCTACTAAGGCGCAATCTCAGCCGAGGTCATCAATTTCCTCCGATTCAGATGATTTTAGTAAGTGTGGAGAACATAAAGTTAGTAAGATTGATTCTACTACTGCTACTGTTAATAGAGATTCTACAGCTACTAAAGTATCTTCACCGCCGGTGGAATCTCCGCCGAGGTCGTCAATTTCCTCTGATCAAATTTCTCTTCCTCATGAGTCCTTAAATATGGAGGATACTAAGCCTTCTGCAGCTCCGACGGGGAGTCCGCCGGAAAAACCTCCAATACCGGAAGCGGTGGTGAAGAAGTTTATCAAGGAGGAGCCACTGGCTTTGGTGAAAGCGGATCTGTTTGTCGGAGATGGTACAGCTAGTATTAAGGAAGGTGAAGACAGCGGCAAC</genome_strand>
        <mrna_strand>CCCAATCCC-TTTTTGTAGCAGCAGTGTTCTGTTTCTTGCTTCATGGAATTGAATCATACCAAGCAGACTCTGCAAACGGCTATGGAGAATGAACAGCAGCATCTCTCCCTCTCTGAATCAGATTCTACTGATTCTGAACCTGAGAAAGCTATTACTTTCTCCTCCCCAGCTCGTTTTCATAGCGGCTCCGATTCTGATCATTCCACTAAGTTCCAAACAGATAAAGCTACTAATCCCTCTACCGTCAATGGCGATTCTACTAAGGCGCAATCTCAGCCGAGGTCATCAATTTCCTCCGATTCAGATGATTTTAGTAAGTGTGGAGAACATAAAGTTAGTAAGATTGATTCTACTACTGCTACTGTTAATAGAGATTCTACAGCTACTAAAGTATCTTCACCGCCGGTGGAATCTCCGCCGAGGTCGTCAATTTCCTCTGATCAAATTTCTCTTCCTCATGAGTCCTTAAATATGGAGGATACTAAGCCTTCTGCAGCTCCGACGGGGAGTCCGCCGGAAAAACCTCCAATACCGGAAGCGGTGGTGAAGAAGTTTATCAAGGAGGAGCCACTGGCTTTGGTGAAAGTGGATCTGTTTGTCGGACATGGTACAGCTAGTATTAAGGAAGGTGATTACAGCGGCAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E334690" ref_strand="+" ref_description="SGN-E334690 [cTOD-23-D10]">
      <seq>ttcttcatggaattgaatcataccaagcagactctgcaaacggctatggagaatgaacagcagcatctctccctctctgaatcagattctactgattctgaacctgagaaagctattactttctcctccccagctcgttttcatagcggctccgattctgatcattccactaagttccaaacagataaagctactaatccctctaccgtcaatggcgattctactaaggcgcaatctcagccgaggtcatcaatttcctccgattcagatgattttagtaagtgtggagaacataaagttagtaagattgattctactactgctactgttaatagagattctacagctactaaagtatcttcaccgccggtggaatctccgccgaggtcgtcaatttcctctgatcaaatttctcttcctcatgagtccttaaatatggaggatactaagccttctgcagctccgacggggagtccgccggaaaaacctccaataccggaagcggtggtgaagaagtttatcaaggaggagccactggctttggtgaaagcggatctgtttgtcggagatggtacagctagtattaaggaaggtgaagacagcggcaaccgtcggcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="101066" stop="102283"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101366" g_stop="101983" g_length="618"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="618" r_length="618" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E334690" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>618</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E334690" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101366" e_stop="101983"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCATGGAATTGAATCATACCAAGCAGACTCTGCAAACGGCTATGGAGAATGAACAGCAGCATCTCTCCCTCTCTGAATCAGATTCTACTGATTCTGAACCTGAGAAAGCTATTACTTTCTCCTCCCCAGCTCGTTTTCATAGCGGCTCCGATTCTGATCATTCCACTAAGTTCCAAACAGATAAAGCTACTAATCCCTCTACCGTCAATGGCGATTCTACTAAGGCGCAATCTCAGCCGAGGTCATCAATTTCCTCCGATTCAGATGATTTTAGTAAGTGTGGAGAACATAAAGTTAGTAAGATTGATTCTACTACTGCTACTGTTAATAGAGATTCTACAGCTACTAAAGTATCTTCACCGCCGGTGGAATCTCCGCCGAGGTCGTCAATTTCCTCTGATCAAATTTCTCTTCCTCATGAGTCCTTAAATATGGAGGATACTAAGCCTTCTGCAGCTCCGACGGGGAGTCCGCCGGAAAAACCTCCAATACCGGAAGCGGTGGTGAAGAAGTTTATCAAGGAGGAGCCACTGGCTTTGGTGAAAGCGGATCTGTTTGTCGGAGATGGTACAGCTAGTATTAAGGAAGGTGAAGACAGCGGCAACCGTCGGCAG</genome_strand>
        <mrna_strand>TTCTTCATGGAATTGAATCATACCAAGCAGACTCTGCAAACGGCTATGGAGAATGAACAGCAGCATCTCTCCCTCTCTGAATCAGATTCTACTGATTCTGAACCTGAGAAAGCTATTACTTTCTCCTCCCCAGCTCGTTTTCATAGCGGCTCCGATTCTGATCATTCCACTAAGTTCCAAACAGATAAAGCTACTAATCCCTCTACCGTCAATGGCGATTCTACTAAGGCGCAATCTCAGCCGAGGTCATCAATTTCCTCCGATTCAGATGATTTTAGTAAGTGTGGAGAACATAAAGTTAGTAAGATTGATTCTACTACTGCTACTGTTAATAGAGATTCTACAGCTACTAAAGTATCTTCACCGCCGGTGGAATCTCCGCCGAGGTCGTCAATTTCCTCTGATCAAATTTCTCTTCCTCATGAGTCCTTAAATATGGAGGATACTAAGCCTTCTGCAGCTCCGACGGGGAGTCCGCCGGAAAAACCTCCAATACCGGAAGCGGTGGTGAAGAAGTTTATCAAGGAGGAGCCACTGGCTTTGGTGAAAGCGGATCTGTTTGTCGGAGATGGTACAGCTAGTATTAAGGAAGGTGAAGACAGCGGCAACCGTCGGCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E307417" ref_strand="+" ref_description="SGN-E307417 [cLEY-12-K18]">
      <seq>gactctgcaaacggctatggagaatgaacagcagcatctctccctctctgaatcagattctactgattctgaacctgagaaagctattactttctcctccccagctcgttttcatagcggctccgattctgatcattccactaagttccaaacagataaagctactaatccctctaccgtcaatggcgattctactaaggcgcaatctcagccgatgtcatcaatttcctccgattcagatgattgtagtaagtgtggagaacataaagttagtaagattgattctactactgctactgttaatagagattctacagctactaaaggatcttcaccgccggtggaatctccgccgaggtcgtcaatttcctctgatcaaatatctctgcctcatgagtccttaaatatggaggatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0016A12-LwBd3/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0016A12.2" temp_strand="+" temp_description="C02HBa0016A12.2  AC215357.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0016A12 sequenced_by:kribb upload_account_name:korea">
        <position start="101095" stop="102111"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101395" g_stop="101811" g_length="417"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="417" r_length="417" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0016A12.2" gen_strand="+" ref_id="SGN-E307417" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0016A12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E307417" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101395" e_stop="101811"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTCTGCAAACGGCTATGGAGAATGAACAGCAGCATCTCTCCCTCTCTGAATCAGATTCTACTGATTCTGAACCTGAGAAAGCTATTACTTTCTCCTCCCCAGCTCGTTTTCATAGCGGCTCCGATTCTGATCATTCCACTAAGTTCCAAACAGATAAAGCTACTAATCCCTCTACCGTCAATGGCGATTCTACTAAGGCGCAATCTCAGCCGAGGTCATCAATTTCCTCCGATTCAGATGATTTTAGTAAGTGTGGAGAACATAAAGTTAGTAAGATTGATTCTACTACTGCTACTGTTAATAGAGATTCTACAGCTACTAAAGTATCTTCACCGCCGGTGGAATCTCCGCCGAGGTCGTCAATTTCCTCTGATCAAATTTCTCTTCCTCATGAGTCCTTAAATATGGAGGATAC</genome_strand>
        <mrna_strand>GACTCTGCAAACGGCTATGGAGAATGAACAGCAGCATCTCTCCCTCTCTGAATCAGATTCTACTGATTCTGAACCTGAGAAAGCTATTACTTTCTCCTCCCCAGCTCGTTTTCATAGCGGCTCCGATTCTGATCATTCCACTAAGTTCCAAACAGATAAAGCTACTAATCCCTCTACCGTCAATGGCGATTCTACTAAGGCGCAATCTCAGCCGATGTCATCAATTTCCTCCGATTCAGATGATTGTAGTAAGTGTGGAGAACATAAAGTTAGTAAGATTGATTCTACTACTGCTACTGTTAATAGAGATTCTACAGCTACTAAAGGATCTTCACCGCCGGTGGAATCTCCGCCGAGGTCGTCAATTTCCTCTGATCAAATATCTCTGCCTCATGAGTCCTTAAATATGGAGGATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>339</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="3109" PGL_stop="2564"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3109" e_stop="2564"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="3109" e_stop="2564" e_length="546"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3109" stop="2564"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540619" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3109" stop="2564"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540621" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3108" stop="2564"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289621" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGGGACAACTTCAACACACATTGATGGGATAAGAATATGCGAGGACAACGGAGAGTTGACTCATGTAGATACAGAAATGATAGAGATCAGCTCGCCAGAAGTTCCACGAAAAAGAGTAAGATTTCTGGTGCCTGAGAGCCCACAAATGGATGCAAGTGTTCGCGAAGAGTTGCAAGAACTTATGGAAGCTAGGGAAGCAGGGATGGCATTTATACTTGGTCATTGTTATGTTAGAGCTAAAAGGGGTTCAAGTTTGATAAAAAAGCTGGTGATTAACATAGGATATGACTTTTTAAGAAGAAATTGTCGTGGACCAACATATGCATTGAGCTTCCCTCAAGCTTCAACATTGGAGGTTGGAATGATCTACCATGTATAATTTATGCTTTACTTTTTTTCTAATTAAAGGATAGAATTGTAGCATATGTTTTTTGTTTTTTTTTGTATTTCAAATTCGAAAAGCTTTGTAAATGTTGTAATGGTACACGAGTTTTTGCTTTATACAAGGCAATAAATTAAAAGGAAATACTGAACTTTAGAGGCAT</gDNA_template>
            <first_frame> L  G  Q  L  Q  H  T  L  M  G  *  E  Y  A  R  T  T  E  S  *  L  M  *  I  Q  K  *  *  R  S  A  R  Q  K  F  H  E  K  E  *  D  F  W  C  L  R  A  H  K  W  M  Q  V  F  A  K  S  C  K  N  L  W  K  L  G  K  Q  G  W  H  L  Y  L  V  I  V  M  L  E  L  K  G  V  Q  V  *  *  K  S  W  *  L  T  *  D  M  T  F  *  E  E  I  V  V  D  Q  H  M  H  *  A  S  L  K  L  Q  H  W  R  L  E  *  S  T  M  Y  N  L  C  F  T  F  F  L  I  K  G  *  N  C  S  I  C  F  L  F  F  F  V  F  Q  I  R  K  A  L  *  M  L  *  W  Y  T  S  F  C  F  I  Q  G  N  K  L  K  G  N  T  E  L  *  R  H </first_frame>
            <second_frame>  W  D  N  F  N  T  H  *  W  D  K  N  M  R  G  Q  R  R  V  D  S  C  R  Y  R  N  D  R  D  Q  L  A  R  S  S  T  K  K  S  K  I  S  G  A  *  E  P  T  N  G  C  K  C  S  R  R  V  A  R  T  Y  G  S  *  G  S  R  D  G  I  Y  T  W  S  L  L  C  *  S  *  K  G  F  K  F  D  K  K  A  G  D  *  H  R  I  *  L  F  K  K  K  L  S  W  T  N  I  C  I  E  L  P  S  S  F  N  I  G  G  W  N  D  L  P  C  I  I  Y  A  L  L  F  F  *  L  K  D  R  I  V  A  Y  V  F  C  F  F  L  Y  F  K  F  E  K  L  C  K  C  C  N  G  T  R  V  F  A  L  Y  K  A  I  N  *  K  E  I  L  N  F  R  G   </second_frame>
            <third_frame>   G  T  T  S  T  H  I  D  G  I  R  I  C  E  D  N  G  E  L  T  H  V  D  T  E  M  I  E  I  S  S  P  E  V  P  R  K  R  V  R  F  L  V  P  E  S  P  Q  M  D  A  S  V  R  E  E  L  Q  E  L  M  E  A  R  E  A  G  M  A  F  I  L  G  H  C  Y  V  R  A  K  R  G  S  S  L  I  K  K  L  V  I  N  I  G  Y  D  F  L  R  R  N  C  R  G  P  T  Y  A  L  S  F  P  Q  A  S  T  L  E  V  G  M  I  Y  H  V  *  F  M  L  Y  F  F  S  N  *  R  I  E  L  *  H  M  F  F  V  F  F  C  I  S  N  S  K  S  F  V  N  V  V  M  V  H  E  F  L  L  Y  T  R  Q  *  I  K  R  K  Y  *  T  L  E  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3107" stop="2730"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>375</number_coding_nucleotides>
                  <number_encoded_amino_acids>125</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GTTSTHIDGIRICEDNGELTHVDTEMIEISSPEVPRKRVRFLVPESPQMDASVREELQELMEAREAGMAFILGHCYVRAKRGSSLIKKLVINIGYDFLRRNCRGPTYALSFPQASTLEVGMIYHV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="18202" PGL_stop="17788"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="18202" e_stop="17788"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="18202" e_stop="17788" e_length="415"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18202" stop="17788"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294278" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCATCAGTGGACATACAAGCTCTATCGCTGACGAAAGGTACGTAGAAGTAGAGTGGATCGATGAAAAGAGAGATGAGACAGGTAAGGAGGAAGACATAGTTCCAGCGATTGACGATATCGCTGTTTGGATCGAGAATTTGGCGCCACCATGGCACATCGTTCGAAAATGATTTGTTCTTCAAAGATTGCTGTAAATGACGGAGGTGAGACGCCGGCTTTGCAAATATTCTAGTCATCTTCCATGGCGGAGTCCGATATCAAAATCGGATTCCGGAAGATTGTCTCTCTTCTGGAAAACACAACAGATTCCAATAATTTTTTTGTATTATGAATGAAACAGTGAGTGAAAATTAGCGCTAGAAAAGAAGGAAGAATGAATTAAGAGTGTTCCATTGAAGCTCCTTTTTTCATCAAA</gDNA_template>
            <first_frame> S  S  V  D  I  Q  A  L  S  L  T  K  G  T  *  K  *  S  G  S  M  K  R  E  M  R  Q  V  R  R  K  T  *  F  Q  R  L  T  I  S  L  F  G  S  R  I  W  R  H  H  G  T  S  F  E  N  D  L  F  F  K  D  C  C  K  *  R  R  *  D  A  G  F  A  N  I  L  V  I  F  H  G  G  V  R  Y  Q  N  R  I  P  E  D  C  L  S  S  G  K  H  N  R  F  Q  *  F  F  C  I  M  N  E  T  V  S  E  N  *  R  *  K  R  R  K  N  E  L  R  V  F  H  *  S  S  F  F  H  Q  </first_frame>
            <second_frame>  H  Q  W  T  Y  K  L  Y  R  *  R  K  V  R  R  S  R  V  D  R  *  K  E  R  *  D  R  *  G  G  R  H  S  S  S  D  *  R  Y  R  C  L  D  R  E  F  G  A  T  M  A  H  R  S  K  M  I  C  S  S  K  I  A  V  N  D  G  G  E  T  P  A  L  Q  I  F  *  S  S  S  M  A  E  S  D  I  K  I  G  F  R  K  I  V  S  L  L  E  N  T  T  D  S  N  N  F  F  V  L  *  M  K  Q  *  V  K  I  S  A  R  K  E  G  R  M  N  *  E  C  S  I  E  A  P  F  F  I  K </second_frame>
            <third_frame>   I  S  G  H  T  S  S  I  A  D  E  R  Y  V  E  V  E  W  I  D  E  K  R  D  E  T  G  K  E  E  D  I  V  P  A  I  D  D  I  A  V  W  I  E  N  L  A  P  P  W  H  I  V  R  K  *  F  V  L  Q  R  L  L  *  M  T  E  V  R  R  R  L  C  K  Y  S  S  H  L  P  W  R  S  P  I  S  K  S  D  S  G  R  L  S  L  F  W  K  T  Q  Q  I  P  I  I  F  L  Y  Y  E  *  N  S  E  *  K  L  A  L  E  K  K  E  E  *  I  K  S  V  P  L  K  L  L  F  S  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0016A12.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="17788" PGL_stop="18582"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17788" e_stop="18413"/>
            <exon e_start="18486" e_stop="18582"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="17788" e_stop="18413" e_length="626"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="18414" i_stop="18485" i_length="72"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="18486" e_stop="18582" e_length="97"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17788" stop="18202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294277" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17853" stop="18413"/>
              <exon start="18486" stop="18582"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374139" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17853" stop="18413"/>
              <exon start="18486" stop="18578"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E363008" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17866" stop="18413"/>
              <exon start="18486" stop="18560"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334656" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17882" stop="18290"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330736" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17888" stop="18381"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E363811" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17901" stop="18413"/>
              <exon start="18486" stop="18577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330304" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTGATGAAAAAAGGAGCTTCAATGGAACACTCTTAATTCATTCTTCCTTCTTTTCTAGCGCTAATTTTCACTCACTGTTTCATTCATAATACAAAAAAATTATTGGAATCTGTTGTGTTTTCCAGAAGAGAGACAATCTTCCGGAATCCGATTTTGATATCGGACTCCGCCATGGAAGATGACTAGAATATTTGCAAAGCCGGCGTCTCACCTCCGTCATTTACAGCAATCTTTGAAGAACAAATCATTTTCGAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGATATCGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTCTTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATAGAGCTTGTATGTCCACTGATGACGAAGCCGCCCGTGAAATTACCATCTATCGTTCTCTCACCGACATCTTTTACTTCCTTCACATTGCCATGAAGTTCCGCACAGCTTTTGTTGCTCCTAGCTCTAGGGTTTTCGGCCGGGGTGAGCTTGTTATGGATCCCCGTGAAATTGCTATACGATATCTCAAAACTGATTTCATCGTTGATTTTACAGCTGCTCTTCCCCTGCCTCAA : ATTGTTATTCGCTATGTAATCCCAGCAGCCAAAAGAAATGGTTCGGGTCATTCCAAAAGTACACTTGCACTTATCGTTCTCATACAATATGTGCCAA</gDNA_template>
            <first_frame> F  D  E  K  R  S  F  N  G  T  L  L  I  H  S  S  F  F  S  S  A  N  F  H  S  L  F  H  S  *  Y  K  K  I  I  G  I  C  C  V  F  Q  K  R  D  N  L  P  E  S  D  F  D  I  G  L  R  H  G  R  *  L  E  Y  L  Q  S  R  R  L  T  S  V  I  Y  S  N  L  *  R  T  N  H  F  R  T  M  C  H  G  G  A  K  F  S  I  Q  T  A  I  S  S  I  A  G  T  M  S  S  S  L  P  V  S  S  L  F  S  S  I  H  S  T  S  T  Y  L  S  S  A  I  E  L  V  C  P  L  M  T  K  P  P  V  K  L  P  S  I  V  L  S  P  T  S  F  T  S  F  T  L  P  *  S  S  A  Q  L  L  L  L  L  A  L  G  F  S  A  G  V  S  L  L  W  I  P  V  K  L  L  Y  D  I  S  K  L  I  S  S  L  I  L  Q  L  L  F  P  C  L  K :   L  L  F  A  M  *  S  Q  Q  P  K  E  M  V  R  V  I  P  K  V  H  L  H  L  S  F  S  Y  N  M  C  Q </first_frame>
            <second_frame>  L  M  K  K  G  A  S  M  E  H  S  *  F  I  L  P  S  F  L  A  L  I  F  T  H  C  F  I  H  N  T  K  K  L  L  E  S  V  V  F  S  R  R  E  T  I  F  R  N  P  I  L  I  S  D  S  A  M  E  D  D  *  N  I  C  K  A  G  V  S  P  P  S  F  T  A  I  F  E  E  Q  I  I  F  E  R  C  A  M  V  A  P  N  S  R  S  K  Q  R  Y  R  Q  S  L  E  L  C  L  P  P  Y  L  S  H  L  S  F  H  R  S  T  L  L  L  R  T  F  R  Q  R  *  S  L  Y  V  H  *  *  R  S  R  P  *  N  Y  H  L  S  F  S  H  R  H  L  L  L  P  S  H  C  H  E  V  P  H  S  F  C  C  S  *  L  *  G  F  R  P  G  *  A  C  Y  G  S  P  *  N  C  Y  T  I  S  Q  N  *  F  H  R  *  F  Y  S  C  S  S  P  A  S   : N  C  Y  S  L  C  N  P  S  S  Q  K  K  W  F  G  S  F  Q  K  Y  T  C  T  Y  R  S  H  T  I  C  A   </second_frame>
            <third_frame>   *  *  K  K  E  L  Q  W  N  T  L  N  S  F  F  L  L  F  *  R  *  F  S  L  T  V  S  F  I  I  Q  K  N  Y  W  N  L  L  C  F  P  E  E  R  Q  S  S  G  I  R  F  *  Y  R  T  P  P  W  K  M  T  R  I  F  A  K  P  A  S  H  L  R  H  L  Q  Q  S  L  K  N  K  S  F  S  N  D  V  P  W  W  R  Q  I  L  D  P  N  S  D  I  V  N  R  W  N  Y  V  F  L  L  T  C  L  I  S  L  F  I  D  P  L  Y  F  Y  V  P  F  V  S  D  R  A  C  M  S  T  D  D  E  A  A  R  E  I  T  I  Y  R  S  L  T  D  I  F  Y  F  L  H  I  A  M  K  F  R  T  A  F  V  A  P  S  S  R  V  F  G  R  G  E  L  V  M  D  P  R  E  I  A  I  R  Y  L  K  T  D  F  I  V  D  F  T  A  A  L  P  L  P  Q  :  I  V  I  R  Y  V  I  P  A  A  K  R  N  G  S  G  H  S  K  S  T  L  A  L  I  V  L  I  Q  Y  V  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17946" stop="18413"/>
                    <exon start="18486" stop="18581"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>564</number_coding_nucleotides>
                  <number_encoded_amino_acids>188</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YRTPPWKMTRIFAKPASHLRHLQQSLKNKSFSNDVPWWRQILDPNSDIVNRWNYVFLLTCLISLFIDPLYFYVPFVSDRACMSTDDEAAREITIYRSLTDIFYFLHIAMKFRTAFVAPSSRVFGRGELVMDPREIAIRYLKTDFIVDFTAALPLPQIVIRYVIPAAKRNGSGHSKSTLALIVLIQYVP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="23095" PGL_stop="21210"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23095" e_stop="22774"/>
            <exon e_start="22317" e_stop="22072"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.967" acc_prob="0.985" e_score="0.944"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.944">
            <gDNA_exon_boundary e_start="23095" e_stop="22774" e_length="322"/>
          </exon>
          <intron i_serial="1" don_prob="0.967" acc_prob="0.985">
            <gDNA_intron_boundary i_start="22773" i_stop="22318" i_length="456"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="22317" e_stop="22072" e_length="246"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23095" stop="22774"/>
              <exon start="22317" stop="22072"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253442" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACCTATCATTTTTTTGAAAAATTAACTTTAATGAAAGTGAAATCCAAACAGGTGAGAGATATAAAAAAAAAAAAAGGAAAAGAGAGAGTACTAAATTAAGATGCAGTCCATTCTTTTGCACATAAACAGTAGTAAAGACGTAGTATAAATACTTGAAGTGCGAAGCTGAGAAATGATCCGTCGTGTATGAGTATTCATTGCTGGAGACGAGAAAATTAAATAGAGATGGAGAAGAAGAGATAAGAATCGGAGCAACGTCAAGAATTCAGATACAGAGTAATTTTTGGACAGAGACAGATTTGCTGCTGCTAAAAATGCAGAG : AAAAATCAGGCTCATCTGGCTTAAACAGCTTGGGCATTTTTAAGCTAGAAGAAGAATCAGCCATCTTCTGTTCTATTCCTCTTCTCGTATTAGTAGCAAATCGTTTGGCCAAAATTGTAGCTCCAAGTTGTTGGGAACCACGAGAACCACTGGCTACTAACGGTTGCTCAGGACCAGCGTCATCAAAACTTTGCTCATTGTAGTTACCCTCATCATTAGGATCTTGATTATAATAATAGCTCTCTT</gDNA_template>
            <first_frame> T  Y  H  F  F  E  K  L  T  L  M  K  V  K  S  K  Q  V  R  D  I  K  K  K  K  G  K  E  R  V  L  N  *  D  A  V  H  S  F  A  H  K  Q  *  *  R  R  S  I  N  T  *  S  A  K  L  R  N  D  P  S  C  M  S  I  H  C  W  R  R  E  N  *  I  E  M  E  K  K  R  *  E  S  E  Q  R  Q  E  F  R  Y  R  V  I  F  G  Q  R  Q  I  C  C  C  *  K  C  R   : E  K  S  G  S  S  G  L  N  S  L  G  I  F  K  L  E  E  E  S  A  I  F  C  S  I  P  L  L  V  L  V  A  N  R  L  A  K  I  V  A  P  S  C  W  E  P  R  E  P  L  A  T  N  G  C  S  G  P  A  S  S  K  L  C  S  L  *  L  P  S  S  L  G  S  *  L  *  *  *  L  S  </first_frame>
            <second_frame>  P  I  I  F  L  K  N  *  L  *  *  K  *  N  P  N  R  *  E  I  *  K  K  K  K  E  K  R  E  Y  *  I  K  M  Q  S  I  L  L  H  I  N  S  S  K  D  V  V  *  I  L  E  V  R  S  *  E  M  I  R  R  V  *  V  F  I  A  G  D  E  K  I  K  *  R  W  R  R  R  D  K  N  R  S  N  V  K  N  S  D  T  E  *  F  L  D  R  D  R  F  A  A  A  K  N  A  E  :  K  N  Q  A  H  L  A  *  T  A  W  A  F  L  S  *  K  K  N  Q  P  S  S  V  L  F  L  F  S  Y  *  *  Q  I  V  W  P  K  L  *  L  Q  V  V  G  N  H  E  N  H  W  L  L  T  V  A  Q  D  Q  R  H  Q  N  F  A  H  C  S  Y  P  H  H  *  D  L  D  Y  N  N  S  S  L </second_frame>
            <third_frame>   L  S  F  F  *  K  I  N  F  N  E  S  E  I  Q  T  G  E  R  Y  K  K  K  K  R  K  R  E  S  T  K  L  R  C  S  P  F  F  C  T  *  T  V  V  K  T  *  Y  K  Y  L  K  C  E  A  E  K  *  S  V  V  Y  E  Y  S  L  L  E  T  R  K  L  N  R  D  G  E  E  E  I  R  I  G  A  T  S  R  I  Q  I  Q  S  N  F  W  T  E  T  D  L  L  L  L  K  M  Q  R :   K  I  R  L  I  W  L  K  Q  L  G  H  F  *  A  R  R  R  I  S  H  L  L  F  Y  S  S  S  R  I  S  S  K  S  F  G  Q  N  C  S  S  K  L  L  G  T  T  R  T  T  G  Y  *  R  L  L  R  T  S  V  I  K  T  L  L  I  V  V  T  L  I  I  R  I  L  I  I  I  I  A  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22783" stop="22774"/>
                    <exon start="22317" stop="22115"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KCREKSGSSGLNSLGIFKLEEESAIFCSIPLLVLVANRLAKIVAPSCWEPREPLATNGCSGPASSKLCSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="21993" e_stop="21210"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="21993" e_stop="21210" e_length="784"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21993" stop="21210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357653" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCACTGATGAGAATAGTACCTAAATGCATGCTGTAGCTTCATGCTGTGAAGACGTTTAAATTGAACTGCAAAAAATTTCAGGTCTTCAGCTCGAAGTGCAAATGCTTCAACTTCAGTAAGTGTTCTCACTGTTCGAGTTGAAGCTGGCAACTGCGTTGAGTTAGGCAGTAAGGCCCAAGTCAGCAATTCTTCACCACAAAAATCATTAGGTCCAAGGGTGATTGAATTGAAGAATCCAGATCTTCCCCCATTTGTCGTGGAGCTCTCTAGTTGTCCCCTGATGATAAAGAGCATCTCACTCACTGGATCATCTTCTAGAACAACATATGTGCCCATTATGCTCAGGGTCGACACTAGGCGTTCACATATTGCATCAAGCAACTGGTCATCCATTTGCTCAAAAAATGGAACCTGCGCAGTCAGGAGATTTTGGGGTCTCTAAAGCTTAGCAAACAAAAGTGGATGGGTTTAGGCATTTACAGAGTAAAAATACAACTCCAAACATGTGGCTGATGCAAATACAAAACGTAAGGTACATCACAAGACAAGTCAAAGCTTAAATTGATGACTGAAGAGATGGAACTATTTTATTTATTCATTCACTAATACTTATTAGTACTTATTTCTTTTGCTCAAATCTTTAACTACTGGCAAATATTTCTGCCTGCAGCTCTTTTCCTTAATGTTTGCCTCCTGAAAGTATTTCAATTCCAAGAGAAGTGAAATACTGCAAACACCACATATTACATCATCTGGCTATGCCATATATATATATATATCTAA</gDNA_template>
            <first_frame> S  T  D  E  N  S  T  *  M  H  A  V  A  S  C  C  E  D  V  *  I  E  L  Q  K  I  S  G  L  Q  L  E  V  Q  M  L  Q  L  Q  *  V  F  S  L  F  E  L  K  L  A  T  A  L  S  *  A  V  R  P  K  S  A  I  L  H  H  K  N  H  *  V  Q  G  *  L  N  *  R  I  Q  I  F  P  H  L  S  W  S  S  L  V  V  P  *  *  *  R  A  S  H  S  L  D  H  L  L  E  Q  H  M  C  P  L  C  S  G  S  T  L  G  V  H  I  L  H  Q  A  T  G  H  P  F  A  Q  K  M  E  P  A  Q  S  G  D  F  G  V  S  K  A  *  Q  T  K  V  D  G  F  R  H  L  Q  S  K  N  T  T  P  N  M  W  L  M  Q  I  Q  N  V  R  Y  I  T  R  Q  V  K  A  *  I  D  D  *  R  D  G  T  I  L  F  I  H  S  L  I  L  I  S  T  Y  F  F  C  S  N  L  *  L  L  A  N  I  S  A  C  S  S  F  P  *  C  L  P  P  E  S  I  S  I  P  R  E  V  K  Y  C  K  H  H  I  L  H  H  L  A  M  P  Y  I  Y  I  Y  L  </first_frame>
            <second_frame>  P  L  M  R  I  V  P  K  C  M  L  *  L  H  A  V  K  T  F  K  L  N  C  K  K  F  Q  V  F  S  S  K  C  K  C  F  N  F  S  K  C  S  H  C  S  S  *  S  W  Q  L  R  *  V  R  Q  *  G  P  S  Q  Q  F  F  T  T  K  I  I  R  S  K  G  D  *  I  E  E  S  R  S  S  P  I  C  R  G  A  L  *  L  S  P  D  D  K  E  H  L  T  H  W  I  I  F  *  N  N  I  C  A  H  Y  A  Q  G  R  H  *  A  F  T  Y  C  I  K  Q  L  V  I  H  L  L  K  K  W  N  L  R  S  Q  E  I  L  G  S  L  K  L  S  K  Q  K  W  M  G  L  G  I  Y  R  V  K  I  Q  L  Q  T  C  G  *  C  K  Y  K  T  *  G  T  S  Q  D  K  S  K  L  K  L  M  T  E  E  M  E  L  F  Y  L  F  I  H  *  Y  L  L  V  L  I  S  F  A  Q  I  F  N  Y  W  Q  I  F  L  P  A  A  L  F  L  N  V  C  L  L  K  V  F  Q  F  Q  E  K  *  N  T  A  N  T  T  Y  Y  I  I  W  L  C  H  I  Y  I  Y  I  * </second_frame>
            <third_frame>   H  *  *  E  *  Y  L  N  A  C  C  S  F  M  L  *  R  R  L  N  *  T  A  K  N  F  R  S  S  A  R  S  A  N  A  S  T  S  V  S  V  L  T  V  R  V  E  A  G  N  C  V  E  L  G  S  K  A  Q  V  S  N  S  S  P  Q  K  S  L  G  P  R  V  I  E  L  K  N  P  D  L  P  P  F  V  V  E  L  S  S  C  P  L  M  I  K  S  I  S  L  T  G  S  S  S  R  T  T  Y  V  P  I  M  L  R  V  D  T  R  R  S  H  I  A  S  S  N  W  S  S  I  C  S  K  N  G  T  C  A  V  R  R  F  W  G  L  *  S  L  A  N  K  S  G  W  V  *  A  F  T  E  *  K  Y  N  S  K  H  V  A  D  A  N  T  K  R  K  V  H  H  K  T  S  Q  S  L  N  *  *  L  K  R  W  N  Y  F  I  Y  S  F  T  N  T  Y  *  Y  L  F  L  L  L  K  S  L  T  T  G  K  Y  F  C  L  Q  L  F  S  L  M  F  A  S  *  K  Y  F  N  S  K  R  S  E  I  L  Q  T  P  H  I  T  S  S  G  Y  A  I  Y  I  Y  I  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="-"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21928" stop="21551"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>375</number_coding_nucleotides>
                  <number_encoded_amino_acids>125</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TAKNFRSSARSANASTSVSVLTVRVEAGNCVELGSKAQVSNSSPQKSLGPRVIELKNPDLPPFVVELSSCPLMIKSISLTGSSSRTTYVPIMLRVDTRRSHIASSNWSSICSKNGTCAVRRFWGL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="22894" e_stop="22774"/>
            <exon e_start="21911" e_stop="21464"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.967" acc_prob="0.821" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="22894" e_stop="22774" e_length="121"/>
          </exon>
          <intron i_serial="1" don_prob="0.967" acc_prob="0.821">
            <gDNA_intron_boundary i_start="22773" i_stop="21912" i_length="862"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="21911" e_stop="21464" e_length="448"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22894" stop="22774"/>
              <exon start="21911" stop="21464"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308495" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGAGACGAGAAAATTAAATAGAGATGGAGAAGAAGAGATAAGAATCGGAGCAACGTCAAGAATTCAGATACAGAGTAATTTTTGGACAGAGACAGATTTGCTGCTGCTAAAAATGCAGAG : GTCTTCAGCTCGAAGTGCAAATGCTTCAACTTCAGTAAGTGTTCTCACTGTTCGAGTTGAAGCTGGCAACTGCGTTGAGTTAGGCAGTAAGGCCCAAGTCAGCAATTCTTCACCACAAAAATCATTAGGTCCAAGGGTGATTGAATTGAAGAATCCAGATCTTCCCCCATTTGTCGTGGAGCTCTCTAGTTGTCCCCTGATGATAAAGAGCATCTCACTCACTGGATCATCTTCTAGAACAACATATGTGCCCATTATGCTCAGGGTCGACACTAGGCGTTCACATATTGCATCAAGCAACTGGTCATCCATTTGCTCAAAAAATGGAACCTGCGCAGTCAGGAGATTTTGGGGTCTCTAAAGCTTAGCAAACAAAAGTGGATGGGTTTAGGCATTTACAGAGTAAAAATACAACTCCAAACATGTGGCTGATGCAAATACAAAACGT</gDNA_template>
            <first_frame> W  R  R  E  N  *  I  E  M  E  K  K  R  *  E  S  E  Q  R  Q  E  F  R  Y  R  V  I  F  G  Q  R  Q  I  C  C  C  *  K  C  R   : G  L  Q  L  E  V  Q  M  L  Q  L  Q  *  V  F  S  L  F  E  L  K  L  A  T  A  L  S  *  A  V  R  P  K  S  A  I  L  H  H  K  N  H  *  V  Q  G  *  L  N  *  R  I  Q  I  F  P  H  L  S  W  S  S  L  V  V  P  *  *  *  R  A  S  H  S  L  D  H  L  L  E  Q  H  M  C  P  L  C  S  G  S  T  L  G  V  H  I  L  H  Q  A  T  G  H  P  F  A  Q  K  M  E  P  A  Q  S  G  D  F  G  V  S  K  A  *  Q  T  K  V  D  G  F  R  H  L  Q  S  K  N  T  T  P  N  M  W  L  M  Q  I  Q  N   </first_frame>
            <second_frame>  G  D  E  K  I  K  *  R  W  R  R  R  D  K  N  R  S  N  V  K  N  S  D  T  E  *  F  L  D  R  D  R  F  A  A  A  K  N  A  E  :  V  F  S  S  K  C  K  C  F  N  F  S  K  C  S  H  C  S  S  *  S  W  Q  L  R  *  V  R  Q  *  G  P  S  Q  Q  F  F  T  T  K  I  I  R  S  K  G  D  *  I  E  E  S  R  S  S  P  I  C  R  G  A  L  *  L  S  P  D  D  K  E  H  L  T  H  W  I  I  F  *  N  N  I  C  A  H  Y  A  Q  G  R  H  *  A  F  T  Y  C  I  K  Q  L  V  I  H  L  L  K  K  W  N  L  R  S  Q  E  I  L  G  S  L  K  L  S  K  Q  K  W  M  G  L  G  I  Y  R  V  K  I  Q  L  Q  T  C  G  *  C  K  Y  K  T  </second_frame>
            <third_frame>   E  T  R  K  L  N  R  D  G  E  E  E  I  R  I  G  A  T  S  R  I  Q  I  Q  S  N  F  W  T  E  T  D  L  L  L  L  K  M  Q  R :   S  S  A  R  S  A  N  A  S  T  S  V  S  V  L  T  V  R  V  E  A  G  N  C  V  E  L  G  S  K  A  Q  V  S  N  S  S  P  Q  K  S  L  G  P  R  V  I  E  L  K  N  P  D  L  P  P  F  V  V  E  L  S  S  C  P  L  M  I  K  S  I  S  L  T  G  S  S  S  R  T  T  Y  V  P  I  M  L  R  V  D  T  R  R  S  H  I  A  S  S  N  W  S  S  I  C  S  K  N  G  T  C  A  V  R  R  F  W  G  L  *  S  L  A  N  K  S  G  W  V  *  A  F  T  E  *  K  Y  N  S  K  H  V  A  D  A  N  T  K  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="-"/>
                <serials PGL_serial="4" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22892" stop="22774"/>
                    <exon start="21911" stop="21551"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>477</number_coding_nucleotides>
                  <number_encoded_amino_acids>159</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ETRKLNRDGEEEIRIGATSRIQIQSNFWTETDLLLLKMQRSSARSANASTSVSVLTVRVEAGNCVELGSKAQVSNSSPQKSLGPRVIELKNPDLPPFVVELSSCPLMIKSISLTGSSSRTTYVPIMLRVDTRRSHIASSNWSSICSKNGTCAVRRFWGL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="21371" PGL_stop="22649"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="21371" e_stop="22529"/>
            <exon e_start="22644" e_stop="22649"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.898" e_score="0.983"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.983">
            <gDNA_exon_boundary e_start="21371" e_stop="22529" e_length="1159"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.898">
            <gDNA_intron_boundary i_start="22530" i_stop="22643" i_length="114"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="22644" e_stop="22649" e_length="6"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21371" stop="21906"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318767" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21766" stop="22489"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374138" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22070" stop="22529"/>
              <exon start="22644" stop="22649"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279612" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAAGTACTAATAAGTATTAGTGAATGAATAAATAAAATAGTTCCATCTCTTCAGTCATCAATTTAAGCTTTGACTTGTCTTGTGATGTACCTTACGTTTTGTATTTGCATCAGCCACATGTTTGGAGTTGTATTTTTACTCTGTAAATGCCTAAACCCATCCACTTTTGTTTGCTAAGCTTTAGAGACCCCAAAATCTCCTGACTGCGCAGGTTCCATTTTTTGAGCAAATGGATGACCAGTTGCTTGATGCAATATGTGAACGCCTAGTGTCGACCCTGAGCATAATGGGCACATATGTTGTTCTAGAAGATGATCCAGTGAGTGAGATGCTCTTTATCATCAGGGGACAACTAGAGAGCTCCACGACAAATGGGGGAAGATCTGGATTCTTCAATTCAATCACCCTTGGACCTAATGATTTTTGTGGTGAAGAATTGCTGACTTGGGCCTTACTGCCTAACTCAACGCAGTTGCCAGCTTCAACTCGAACAGTGAGAACACTTACTGAAGTTGAAGCATTTGCACTTCGAGCTGAAGACCTGAAATTTTTTGCAGTTCAATTTAAACGTCTTCACAGCATGAAGCTACAGCATGCATTTAGGTACTATTCTCATCAGTGGAGAACATGGGGTGCTTGTTTTATACAGGCTGCATGGAGAAGGTATAAGAAGAAAAAGATGGAATACGAGTTGGCTCTACAAGAGAGCTATTATTATAATCAAGATCCTAATGATGAGGGTAACTACAATGAGCAAAGTTTTGATGACGCTGGTCCTGAGCAACCGTTAGTAGCCAGTGGTTCTCGTGGTTCCCAACAACTTGGAGCTACAATTTTGGCCAAACGATTTGCTACTAATACGAGAAGAGGAATAGAACAGAAGATGGCTGATTCTTCTTCTAGCTTAAAAATGCCCAAGCTGTTTAAGCCAGATGAGCCTGATTTTTCTGCAGAATGAAGGCCACATCATATGTAATTAGTTAGAACACCTTGCATTACTGAAAGGTACTGGTGACTGGTGAGTAATGACAAAGCTAGTACCCTTTTTTTTAAAACTTTTTTGTAAATTTCAGGAACTATAGGCCTTTTTGATTACAACATTATTCCCTTTTCAATCATGTGAAATACAACCTTCTTTTCTAGTTGATTGTGCCTAAAA : AAAAAA</gDNA_template>
            <first_frame> *  V  L  I  S  I  S  E  *  I  N  K  I  V  P  S  L  Q  S  S  I  *  A  L  T  C  L  V  M  Y  L  T  F  C  I  C  I  S  H  M  F  G  V  V  F  L  L  C  K  C  L  N  P  S  T  F  V  C  *  A  L  E  T  P  K  S  P  D  C  A  G  S  I  F  *  A  N  G  *  P  V  A  *  C  N  M  *  T  P  S  V  D  P  E  H  N  G  H  I  C  C  S  R  R  *  S  S  E  *  D  A  L  Y  H  Q  G  T  T  R  E  L  H  D  K  W  G  K  I  W  I  L  Q  F  N  H  P  W  T  *  *  F  L  W  *  R  I  A  D  L  G  L  T  A  *  L  N  A  V  A  S  F  N  S  N  S  E  N  T  Y  *  S  *  S  I  C  T  S  S  *  R  P  E  I  F  C  S  S  I  *  T  S  S  Q  H  E  A  T  A  C  I  *  V  L  F  S  S  V  E  N  M  G  C  L  F  Y  T  G  C  M  E  K  V  *  E  E  K  D  G  I  R  V  G  S  T  R  E  L  L  L  *  S  R  S  *  *  *  G  *  L  Q  *  A  K  F  *  *  R  W  S  *  A  T  V  S  S  Q  W  F  S  W  F  P  T  T  W  S  Y  N  F  G  Q  T  I  C  Y  *  Y  E  K  R  N  R  T  E  D  G  *  F  F  F  *  L  K  N  A  Q  A  V  *  A  R  *  A  *  F  F  C  R  M  K  A  T  S  Y  V  I  S  *  N  T  L  H  Y  *  K  V  L  V  T  G  E  *  *  Q  S  *  Y  P  F  F  *  N  F  F  V  N  F  R  N  Y  R  P  F  *  L  Q  H  Y  S  L  F  N  H  V  K  Y  N  L  L  F  *  L  I  V  P  K   : K  K  </first_frame>
            <second_frame>  K  Y  *  *  V  L  V  N  E  *  I  K  *  F  H  L  F  S  H  Q  F  K  L  *  L  V  L  *  C  T  L  R  F  V  F  A  S  A  T  C  L  E  L  Y  F  Y  S  V  N  A  *  T  H  P  L  L  F  A  K  L  *  R  P  Q  N  L  L  T  A  Q  V  P  F  F  E  Q  M  D  D  Q  L  L  D  A  I  C  E  R  L  V  S  T  L  S  I  M  G  T  Y  V  V  L  E  D  D  P  V  S  E  M  L  F  I  I  R  G  Q  L  E  S  S  T  T  N  G  G  R  S  G  F  F  N  S  I  T  L  G  P  N  D  F  C  G  E  E  L  L  T  W  A  L  L  P  N  S  T  Q  L  P  A  S  T  R  T  V  R  T  L  T  E  V  E  A  F  A  L  R  A  E  D  L  K  F  F  A  V  Q  F  K  R  L  H  S  M  K  L  Q  H  A  F  R  Y  Y  S  H  Q  W  R  T  W  G  A  C  F  I  Q  A  A  W  R  R  Y  K  K  K  K  M  E  Y  E  L  A  L  Q  E  S  Y  Y  Y  N  Q  D  P  N  D  E  G  N  Y  N  E  Q  S  F  D  D  A  G  P  E  Q  P  L  V  A  S  G  S  R  G  S  Q  Q  L  G  A  T  I  L  A  K  R  F  A  T  N  T  R  R  G  I  E  Q  K  M  A  D  S  S  S  S  L  K  M  P  K  L  F  K  P  D  E  P  D  F  S  A  E  *  R  P  H  H  M  *  L  V  R  T  P  C  I  T  E  R  Y  W  *  L  V  S  N  D  K  A  S  T  L  F  F  K  T  F  L  *  I  S  G  T  I  G  L  F  D  Y  N  I  I  P  F  S  I  M  *  N  T  T  F  F  S  S  *  L  C  L  K  :  K  K </second_frame>
            <third_frame>   S  T  N  K  Y  *  *  M  N  K  *  N  S  S  I  S  S  V  I  N  L  S  F  D  L  S  C  D  V  P  Y  V  L  Y  L  H  Q  P  H  V  W  S  C  I  F  T  L  *  M  P  K  P  I  H  F  C  L  L  S  F  R  D  P  K  I  S  *  L  R  R  F  H  F  L  S  K  W  M  T  S  C  L  M  Q  Y  V  N  A  *  C  R  P  *  A  *  W  A  H  M  L  F  *  K  M  I  Q  *  V  R  C  S  L  S  S  G  D  N  *  R  A  P  R  Q  M  G  E  D  L  D  S  S  I  Q  S  P  L  D  L  M  I  F  V  V  K  N  C  *  L  G  P  Y  C  L  T  Q  R  S  C  Q  L  Q  L  E  Q  *  E  H  L  L  K  L  K  H  L  H  F  E  L  K  T  *  N  F  L  Q  F  N  L  N  V  F  T  A  *  S  Y  S  M  H  L  G  T  I  L  I  S  G  E  H  G  V  L  V  L  Y  R  L  H  G  E  G  I  R  R  K  R  W  N  T  S  W  L  Y  K  R  A  I  I  I  I  K  I  L  M  M  R  V  T  T  M  S  K  V  L  M  T  L  V  L  S  N  R  *  *  P  V  V  L  V  V  P  N  N  L  E  L  Q  F  W  P  N  D  L  L  L  I  R  E  E  E  *  N  R  R  W  L  I  L  L  L  A  *  K  C  P  S  C  L  S  Q  M  S  L  I  F  L  Q  N  E  G  H  I  I  C  N  *  L  E  H  L  A  L  L  K  G  T  G  D  W  *  V  M  T  K  L  V  P  F  F  L  K  L  F  C  K  F  Q  E  L  *  A  F  L  I  T  T  L  F  P  F  Q  S  C  E  I  Q  P  S  F  L  V  D  C  A  *  K :   K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21555" stop="22328"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>771</number_coding_nucleotides>
                  <number_encoded_amino_acids>257</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RPQNLLTAQVPFFEQMDDQLLDAICERLVSTLSIMGTYVVLEDDPVSEMLFIIRGQLESSTTNGGRSGFFNSITLGPNDFCGEELLTWALLPNSTQLPASTRTVRTLTEVEAFALRAEDLKFFAVQFKRLHSMKLQHAFRYYSHQWRTWGACFIQAAWRRYKKKKMEYELALQESYYYNQDPNDEGNYNEQSFDDAGPEQPLVASGSRGSQQLGATILAKRFATNTRRGIEQKMADSSSSLKMPKLFKPDEPDFSAE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="26419" PGL_stop="32103"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="26425" e_stop="26514"/>
            <exon e_start="28197" e_stop="28337"/>
            <exon e_start="28417" e_stop="29530"/>
            <exon e_start="29750" e_stop="29836"/>
            <exon e_start="30480" e_stop="30653"/>
            <exon e_start="30733" e_stop="30870"/>
            <exon e_start="31151" e_stop="31288"/>
            <exon e_start="31398" e_stop="31459"/>
            <exon e_start="31539" e_stop="32103"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.901" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.750" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.980" e_score="0.987"/>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.933" acc_prob="0.857" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.920" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="26425" e_stop="26514" e_length="90"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.901">
            <gDNA_intron_boundary i_start="26515" i_stop="28196" i_length="1682"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="28197" e_stop="28337" e_length="141"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.750">
            <gDNA_intron_boundary i_start="28338" i_stop="28416" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="0.987">
            <gDNA_exon_boundary e_start="28417" e_stop="29530" e_length="1114"/>
          </exon>
          <intron i_serial="3" don_prob="0.959" acc_prob="0.980">
            <gDNA_intron_boundary i_start="29531" i_stop="29749" i_length="219"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="29750" e_stop="29836" e_length="87"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="29837" i_stop="30479" i_length="643"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="30480" e_stop="30653" e_length="174"/>
          </exon>
          <intron i_serial="5" don_prob="0.933" acc_prob="0.857">
            <gDNA_intron_boundary i_start="30654" i_stop="30732" i_length="79"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="30733" e_stop="30870" e_length="138"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="0.996">
            <gDNA_intron_boundary i_start="30871" i_stop="31150" i_length="280"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="31151" e_stop="31288" e_length="138"/>
          </exon>
          <intron i_serial="7" don_prob="0.961" acc_prob="0.997">
            <gDNA_intron_boundary i_start="31289" i_stop="31397" i_length="109"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="31398" e_stop="31459" e_length="62"/>
          </exon>
          <intron i_serial="8" don_prob="0.995" acc_prob="0.920">
            <gDNA_intron_boundary i_start="31460" i_stop="31538" i_length="79"/>
          </intron>
          <exon e_serial="9" e_score="0.998">
            <gDNA_exon_boundary e_start="31539" e_stop="32103" e_length="565"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26425" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256721" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26426" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28755"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271992" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26427" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28606"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258160" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26427" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28539"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217486" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28464" stop="28868"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336972" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28534" stop="29009"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324375" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28612" stop="29286"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334199" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28616" stop="29242"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329876" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28768" stop="29259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28851" stop="29127"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261296" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28991" stop="29530"/>
              <exon start="29750" stop="29787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264189" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29025" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30624"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29025" stop="29530"/>
              <exon start="29750" stop="29799"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271439" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29063" stop="29530"/>
              <exon start="29750" stop="29776"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249362" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29075" stop="29530"/>
              <exon start="29750" stop="29785"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314892" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29075" stop="29476"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314995" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29176" stop="29466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257422" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29373" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249288" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29417" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30828"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275091" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29526" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="31693"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261730" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29776" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31411"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255543" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30511" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229381" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30539" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31206"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229740" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30782" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="32085"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542978" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30865" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31434"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264242" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31190" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="31872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264163" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31218" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="32103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355126" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31218" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="32103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349395" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31399" stop="31459"/>
              <exon start="31539" stop="32049"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31399" stop="31459"/>
              <exon start="31539" stop="31840"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281400" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31431" stop="31459"/>
              <exon start="31539" stop="31981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733861" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31540" stop="31956"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256282" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT : TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG : GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG : GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAG : ATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAG : GGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAG : ATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAG : GATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAA : GGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTTAGAGGTCACTTGTATACAGTGTAGATAAGACCAAAACGCTGTATTGTGTGTGTGTTATTGTTTGTTACTAACTTCTTATGATTTGATAACAATATGCAAACTTGTTTGTGTGAGACCTTTCTTGATTTCTGTAGCTCTGATGCAAAATAGGATCTTGTGTTTGAGTTTTGTGGGAATGTAATGAATTATATATAGATGTAATGTTATAATTCTATATTACTACGGTATATA</gDNA_template>
            <first_frame> N  F  E  C  S  L  F  M  *  T  L  C  F  V  *  N  K  G  P  L  R  F  L  *  A  T  L  K  I  S  :  L  G  T  P  T  T  G  E  R  V  S  E  G  F  V  A  V  P  W  C  M  K  S  Q  S  L  H  L  L  R  L  N  I  I  S  F  S  L  M  D  S  L  L  M  Q  P  Q  :  G  R  H  F  L  H  L  T  L  E  Q  A  K  L  L  L  R  L  R  R  P  T  L  K  M  S  T  V  Q  S  L  L  P  V  K  H  L  M  K  D  H  G  L  K  *  L  V  Q  *  P  N  F  L  I  F  P  Y  P  L  P  C  P  N  S  E  R  R  I  *  N  L  N  L  T  C  S  T  F  K  V  L  I  A  E  H  I  D  L  S  D  I  R  V  *  I  L  I  F  S  H  F  S  T  F  T  Y  I  F  I  S  C  I  I  W  S  L  Y  R  S  *  F  L  S  W  S  F  N  *  *  *  L  F  E  *  Y  K  S  L  S  L  L  K  K  I  G  I  K  L  K  N  D  F  L  R  *  *  L  F  S  K  V  T  I  *  E  I  N  P  P  L  Q  T  T  T  A  C  L  N  S  Q  S  Y  L  S  M  Y  N  N  V  L  T  *  P  N  I  S  R  K  G  H  V  *  C  C  S  L  L  I  C  L  R  G  T  V  M  N  L  Q  H  L  R  L  G  I  R  E  S  L  T  N  K  L  Q  M  K  K  Y  Q  C  S  F  V  F  S  D  T  M  L  V  K  K  I  R  K  M  A  L  C  F  L  L  T  V  *  *  P  L  I  V  Y  Q  L  T  F  *  C  L  L  N  H  P  K  C  F  S  K  Y  F  C  L  H  F  L  F  R  L  G  *  *  N  S  W  S  Y  S  S  C  *  Q  F  A  P  C  S  D  P  A  *  A  N  W  C  C  R  T  D  N  T  L  E  F  S  V  I  N  V  R  L  E  S  W  P  C  T  C  L  W  *  H  C  R  T  K  T  S  R  T  N  T  T  L  C  P  V  C  V  K  V  I  P  *   : G  W  T  S  P  W  S  L  K  C  H  S  W  I  R  *  C  R  C  R  S  C  Q  S  Y  G  C  R  *   : D  C  F  Y  R  V  H  R  N  W  *  S  C  R  R  C  S  C  K  E  Q  P  K  T  C  D  I  G  A  R  R  K  I  S  F  H  H  L  *  R  C  R  R  *  *  S  C  *  V  G  S  F  C  C  F  L  *  P   : G  T  M  L  L  C  W  I  S  D  I  R  T  *  K  S  I  *  *  I  C  G  E  S  Q  S  S  C  F  K  T  H  C  W  R  P  F  Q  E  G  S  *  T  R  S  A   : D  *  Y  R  A  I  *  E  D  P  E  V  H  K  I  W  Y  *  K  R  G  Y  S  R  V  W  R  G  K  I  G  F  Q  G  L  L  C  P  T  Y  C  L  L  K  C  P   : G  *  H  A  D  C  Q  R  *  D  I  W  T  S  A  V  P  L  E  I  Q  :  G  C  *  R  G  H  P  K  G  K  L  V  T  L  W  V  G  S  G  C  F  Y  P  E  Y  R  C  S  Q  H  N  I  S  S  P  *  S  R  D  S  V  G  *  L  L  *  H  L  *  C  C  H  S  V  W  W  L  *  D  E  W  T  W  K  R  E  G  S  L  Q  P  K  *  L  L  A  S  Q  S  Y  C  Y  P  S  E  E  S  S  M  A  V  V  F  P  P  A  F  W  Y  S  *  D  V  V  Q  H  G  N  L  V  F  *  R  S  L  V  Y  S  V  D  K  T  K  T  L  Y  C  V  C  V  I  V  C  Y  *  L  L  M  I  *  *  Q  Y  A  N  L  F  V  *  D  L  S  *  F  L  *  L  *  C  K  I  G  S  C  V  *  V  L  W  E  C  N  E  L  Y  I  D  V  M  L  *  F  Y  I  T  T  V  Y  </first_frame>
            <second_frame>  I  L  N  A  L  S  L  C  K  H  Y  A  L  Y  E  I  K  V  L  *  D  F  C  K  Q  L  *  K  F  L :   *  V  L  Q  L  L  E  K  G  Y  Q  K  V  L  *  Q  C  R  G  A  *  R  A  N  H  S  T  C  *  G  *  I  *  S  A  S  H  *  W  T  V  C  *  C  S  L  R :   E  D  I  S  Y  I  *  P  S  N  R  R  S  Y  Y  Y  G  C  G  G  R  H  *  R  C  Q  P  C  S  L  C  C  P  *  S  I  *  *  R  T  M  A  *  N  D  L  C  S  N  R  T  F  L  S  F  H  I  L  F  L  V  P  T  V  R  G  G  F  R  I  *  T  *  H  V  Q  P  L  R  F  L  S  L  N  T  L  I  Y  R  T  Y  V  F  R  F  *  Y  S  L  I  L  V  L  S  H  I  Y  L  F  P  V  L  Y  G  P  S  T  E  V  N  F  S  V  G  R  S  T  N  S  N  Y  L  S  N  I  S  H  F  L  C  *  R  K  L  E  S  S  *  K  M  T  S  *  D  N  N  Y  L  A  K  *  P  Y  E  K  S  I  R  L  C  R  Q  L  Q  L  V  *  T  P  S  L  T  *  A  C  T  I  M  Y  L  L  N  Q  I  F  P  G  K  V  M  Y  N  V  A  V  C  *  F  A  *  E  A  Q  *  *  T  C  S  T  *  D  L  G  *  G  K  A  L  R  T  S  C  K  *  R  N  T  N  A  H  S  S  F  Q  I  L  C  W  L  R  K  *  E  K  W  R  Y  V  S  F  *  Q  F  N  N  H  L  L  Y  I  N  *  R  S  N  V  C  *  I  T  L  N  A  F  L  S  I  S  A  Y  I  S  Y  S  G  W  A  D  K  I  H  G  L  T  A  P  A  D  S  L  H  H  V  Q  T  L  H  E  P  I  G  V  A  G  Q  I  I  P  W  N  F  P  L  L  M  F  A  W  K  V  G  P  A  L  A  C  G  N  T  V  V  L  K  P  A  E  Q  T  P  L  S  A  L  Y  V  S  K  L  F  H  E  :  V  G  L  P  P  G  V  L  N  V  I  P  G  S  G  S  A  G  A  D  L  A  S  H  M  D  V  D  K  :  I  A  F  T  G  S  T  E  T  G  K  A  V  V  G  A  A  A  K  S  N  L  K  P  V  T  L  E  L  G  G  K  S  P  F  I  I  C  E  D  A  D  V  D  K  A  V  E  L  A  H  S  A  V  F  F  N  Q  :  G  Q  C  C  C  A  G  S  R  T  F  V  H  E  R  V  Y  D  E  F  V  E  K  A  K  A  R  A  L  K  R  I  V  G  D  P  F  K  K  G  V  E  Q  G  P  Q  :  I  D  T  E  Q  F  E  K  I  L  K  Y  I  K  S  G  T  E  S  G  A  T  L  E  S  G  G  E  K  L  G  S  K  G  F  Y  V  Q  P  T  V  F  S  N  V  Q  :  D  N  M  L  I  A  R  D  E  I  F  G  P  V  Q  S  L  L  K  F  K :   D  V  E  E  V  I  R  R  A  N  S  S  H  Y  G  L  A  A  G  V  F  T  Q  N  I  D  A  A  N  T  I  S  R  A  L  R  V  G  T  V  W  V  N  C  F  N  I  F  D  A  A  I  P  F  G  G  Y  K  M  S  G  H  G  R  E  K  G  V  Y  S  L  S  N  Y  L  Q  V  K  A  I  V  T  P  L  K  N  P  A  W  L  *  F  S  P  L  L  S  G  T  P  E  M  S  C  N  T  A  I  L  S  F  R  G  H  L  Y  T  V  *  I  R  P  K  R  C  I  V  C  V  L  L  F  V  T  N  F  L  *  F  D  N  N  M  Q  T  C  L  C  E  T  F  L  D  F  C  S  S  D  A  K  *  D  L  V  F  E  F  C  G  N  V  M  N  Y  I  *  M  *  C  Y  N  S  I  L  L  R  Y  I </second_frame>
            <third_frame>   F  *  M  L  S  L  Y  V  N  I  M  L  C  M  K  *  R  S  S  K  I  S  V  S  N  F  E  N  F   : F  R  Y  S  N  Y  W  R  K  G  I  R  R  F  C  S  S  A  V  V  H  E  E  P  I  T  P  P  V  E  V  K  Y  N  Q  L  L  I  N  G  Q  F  V  D  A  A  S   : G  K  T  F  P  T  F  D  P  R  T  G  E  A  I  T  T  V  A  E  A  D  T  E  D  V  N  R  A  V  F  A  A  R  K  A  F  D  E  G  P  W  P  K  M  T  C  A  V  T  E  L  S  Y  L  S  I  S  S  S  L  S  Q  Q  *  E  A  D  L  E  F  E  L  N  M  F  N  L  *  G  S  Y  R  *  T  H  *  S  I  G  H  T  C  L  D  F  N  I  L  S  F  *  Y  F  H  I  Y  I  Y  F  L  Y  Y  M  V  P  L  P  K  L  I  S  Q  L  V  V  Q  L  I  V  I  I  *  V  I  *  V  T  F  F  V  E  E  N  W  N  Q  V  E  K  *  L  L  E  I  I  T  I  *  Q  S  D  H  M  R  N  Q  S  A  S  A  D  N  Y  S  L  F  K  L  P  V  L  L  K  H  V  Q  *  C  T  Y  L  T  K  Y  F  Q  E  R  S  C  I  M  L  Q  F  A  D  L  L  E  R  H  S  D  E  L  A  A  L  E  T  W  D  K  G  K  P  Y  E  Q  A  A  N  E  E  I  P  M  L  I  R  L  F  R  Y  Y  A  G  *  E  N  K  K  N  G  V  M  F  P  F  D  S  L  I  T  T  Y  C  I  S  I  D  V  L  M  F  A  E  S  P  *  M  L  F  *  V  F  L  L  T  F  L  I  Q  V  G  L  I  K  F  M  V  L  Q  L  L  L  T  V  C  T  M  F  R  P  C  M  S  Q  L  V  L  Q  D  R  *  Y  P  G  I  F  R  Y  *  C  S  P  G  K  L  A  L  H  L  L  V  V  T  L  S  Y  *  N  Q  Q  N  K  H  H  S  L  P  C  M  C  Q  S  Y  S  M  R :   L  D  F  P  L  E  S  *  M  S  F  L  D  P  V  V  Q  V  Q  I  L  P  V  I  W  M  S  I  R :   L  L  L  Q  G  P  Q  K  L  V  K  L  S  *  V  Q  L  Q  R  A  T  *  N  L  *  H  W  S  S  E  E  N  L  L  S  S  F  V  K  M  Q  T  L  I  K  L  L  S  W  L  I  L  L  F  S  L  T  R :   D  N  A  A  V  L  D  L  G  H  S  Y  M  K  E  Y  M  M  N  L  W  R  K  P  K  L  V  L  *  N  A  L  L  E  T  L  S  R  R  E  L  N  K  V  R  R :   L  I  Q  S  N  L  R  R  S  *  S  T  *  N  L  V  L  K  A  G  L  L  S  S  L  E  G  K  N  W  V  P  R  A  S  M  S  N  L  L  S  S  Q  M  S  R :   I  T  C  *  L  P  E  M  R  Y  L  D  Q  C  S  P  S  *  N  S   : R  M  L  K  R  S  S  E  G  Q  T  R  H  I  M  G  W  Q  R  V  F  L  P  R  I  *  M  Q  P  T  Q  Y  L  E  P  L  E  *  G  Q  C  G  L  T  A  L  T  S  L  M  L  P  F  R  L  V  V  I  R  *  V  D  M  E  E  R  R  E  S  T  A  *  V  T  T  C  K  S  K  L  L  L  P  L  *  R  I  Q  H  G  C  S  F  P  P  C  F  L  V  L  L  R  C  R  A  T  R  Q  S  C  L  L  E  V  T  C  I  Q  C  R  *  D  Q  N  A  V  L  C  V  C  Y  C  L  L  L  T  S  Y  D  L  I  T  I  C  K  L  V  C  V  R  P  F  L  I  S  V  A  L  M  Q  N  R  I  L  C  L  S  F  V  G  M  *  *  I  I  Y  R  C  N  V  I  I  L  Y  Y  Y  G  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29252" stop="29530"/>
                    <exon start="29750" stop="29836"/>
                    <exon start="30480" stop="30653"/>
                    <exon start="30733" stop="30870"/>
                    <exon start="31151" stop="31288"/>
                    <exon start="31398" stop="31459"/>
                    <exon start="31539" stop="31812"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1149</number_coding_nucleotides>
                  <number_encoded_amino_acids>383</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ITLNAFLSISAYISYSGWADKIHGLTAPADSLHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKPAEQTPLSALYVSKLFHEVGLPPGVLNVIPGSGSAGADLASHMDVDKIAFTGSTETGKAVVGAAAKSNLKPVTLELGGKSPFIICEDADVDKAVELAHSAVFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRIVGDPFKKGVEQGPQIDTEQFEKILKYIKSGTESGATLESGGEKLGSKGFYVQPTVFSNVQDNMLIARDEIFGPVQSLLKFKDVEEVIRRANSSHYGLAAGVFTQNIDAANTISRALRVGTVWVNCFNIFDAAIPFGGYKMSGHGREKGVYSLSNYLQVKAIVTPLKNPAWL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26475" stop="26514"/>
                    <exon start="28197" stop="28337"/>
                    <exon start="28417" stop="28610"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>372</number_coding_nucleotides>
                  <number_encoded_amino_acids>124</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSSKISVSNFENFFRYSNYWRKGIRRFCSSAVVHEEPITPPVEVKYNQLLINGQFVDAASGKTFPTFDPRTGEAITTVAEADTEDVNRAVFAARKAFDEGPWPKMTCAVTELSYLSISSSLSQQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="26425" e_stop="26514"/>
            <exon e_start="28197" e_stop="28337"/>
            <exon e_start="28417" e_stop="29530"/>
            <exon e_start="29750" e_stop="29836"/>
            <exon e_start="30480" e_stop="30653"/>
            <exon e_start="30733" e_stop="30862"/>
            <exon e_start="31151" e_stop="31288"/>
            <exon e_start="31398" e_stop="31459"/>
            <exon e_start="31539" e_stop="32103"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.901" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.750" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.980" e_score="0.987"/>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.933" acc_prob="0.857" e_score="1.000"/>
          <exon-intron don_prob="0.597" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.920" e_score="1.000"/>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="26425" e_stop="26514" e_length="90"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.901">
            <gDNA_intron_boundary i_start="26515" i_stop="28196" i_length="1682"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="28197" e_stop="28337" e_length="141"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.750">
            <gDNA_intron_boundary i_start="28338" i_stop="28416" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="0.987">
            <gDNA_exon_boundary e_start="28417" e_stop="29530" e_length="1114"/>
          </exon>
          <intron i_serial="3" don_prob="0.959" acc_prob="0.980">
            <gDNA_intron_boundary i_start="29531" i_stop="29749" i_length="219"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="29750" e_stop="29836" e_length="87"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="29837" i_stop="30479" i_length="643"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="30480" e_stop="30653" e_length="174"/>
          </exon>
          <intron i_serial="5" don_prob="0.933" acc_prob="0.857">
            <gDNA_intron_boundary i_start="30654" i_stop="30732" i_length="79"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="30733" e_stop="30862" e_length="130"/>
          </exon>
          <intron i_serial="6" don_prob="0.597" acc_prob="0.996">
            <gDNA_intron_boundary i_start="30863" i_stop="31150" i_length="288"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="31151" e_stop="31288" e_length="138"/>
          </exon>
          <intron i_serial="7" don_prob="0.961" acc_prob="0.997">
            <gDNA_intron_boundary i_start="31289" i_stop="31397" i_length="109"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="31398" e_stop="31459" e_length="62"/>
          </exon>
          <intron i_serial="8" don_prob="0.995" acc_prob="0.920">
            <gDNA_intron_boundary i_start="31460" i_stop="31538" i_length="79"/>
          </intron>
          <exon e_serial="9" e_score="0.977">
            <gDNA_exon_boundary e_start="31539" e_stop="32103" e_length="565"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26425" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256721" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26426" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28755"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271992" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26427" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28606"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258160" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26427" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28539"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217486" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28464" stop="28868"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336972" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28534" stop="29009"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324375" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28612" stop="29286"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334199" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28616" stop="29242"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329876" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28768" stop="29259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28851" stop="29127"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261296" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28991" stop="29530"/>
              <exon start="29750" stop="29787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264189" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29025" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30624"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29025" stop="29530"/>
              <exon start="29750" stop="29799"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271439" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29063" stop="29530"/>
              <exon start="29750" stop="29776"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249362" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29075" stop="29530"/>
              <exon start="29750" stop="29785"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314892" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29075" stop="29476"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314995" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29176" stop="29466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257422" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29373" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249288" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29417" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30828"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275091" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30797" stop="30862"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="31791"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271494" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30802" stop="30862"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="31770"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245692" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31190" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="31872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264163" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31218" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="32103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355126" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31218" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="32103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349395" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31399" stop="31459"/>
              <exon start="31539" stop="32049"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31399" stop="31459"/>
              <exon start="31539" stop="31840"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281400" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31431" stop="31459"/>
              <exon start="31539" stop="31981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733861" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31540" stop="31956"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256282" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT : TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG : GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG : GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAG : ATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAG : GGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAG : ATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAG : GATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAA : GGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTTAGAGGTCACTTGTATACAGTGTAGATAAGACCAAAACGCTGTATTGTGTGTGTGTTATTGTTTGTTACTAACTTCTTATGATTTGATAACAATATGCAAACTTGTTTGTGTGAGACCTTTCTTGATTTCTGTAGCTCTGATGCAAAATAGGATCTTGTGTTTGAGTTTTGTGGGAATGTAATGAATTATATATAGATGTAATGTTATAATTCTATATTACTACGGTATATA</gDNA_template>
            <first_frame> N  F  E  C  S  L  F  M  *  T  L  C  F  V  *  N  K  G  P  L  R  F  L  *  A  T  L  K  I  S  :  L  G  T  P  T  T  G  E  R  V  S  E  G  F  V  A  V  P  W  C  M  K  S  Q  S  L  H  L  L  R  L  N  I  I  S  F  S  L  M  D  S  L  L  M  Q  P  Q  :  G  R  H  F  L  H  L  T  L  E  Q  A  K  L  L  L  R  L  R  R  P  T  L  K  M  S  T  V  Q  S  L  L  P  V  K  H  L  M  K  D  H  G  L  K  *  L  V  Q  *  P  N  F  L  I  F  P  Y  P  L  P  C  P  N  S  E  R  R  I  *  N  L  N  L  T  C  S  T  F  K  V  L  I  A  E  H  I  D  L  S  D  I  R  V  *  I  L  I  F  S  H  F  S  T  F  T  Y  I  F  I  S  C  I  I  W  S  L  Y  R  S  *  F  L  S  W  S  F  N  *  *  *  L  F  E  *  Y  K  S  L  S  L  L  K  K  I  G  I  K  L  K  N  D  F  L  R  *  *  L  F  S  K  V  T  I  *  E  I  N  P  P  L  Q  T  T  T  A  C  L  N  S  Q  S  Y  L  S  M  Y  N  N  V  L  T  *  P  N  I  S  R  K  G  H  V  *  C  C  S  L  L  I  C  L  R  G  T  V  M  N  L  Q  H  L  R  L  G  I  R  E  S  L  T  N  K  L  Q  M  K  K  Y  Q  C  S  F  V  F  S  D  T  M  L  V  K  K  I  R  K  M  A  L  C  F  L  L  T  V  *  *  P  L  I  V  Y  Q  L  T  F  *  C  L  L  N  H  P  K  C  F  S  K  Y  F  C  L  H  F  L  F  R  L  G  *  *  N  S  W  S  Y  S  S  C  *  Q  F  A  P  C  S  D  P  A  *  A  N  W  C  C  R  T  D  N  T  L  E  F  S  V  I  N  V  R  L  E  S  W  P  C  T  C  L  W  *  H  C  R  T  K  T  S  R  T  N  T  T  L  C  P  V  C  V  K  V  I  P  *   : G  W  T  S  P  W  S  L  K  C  H  S  W  I  R  *  C  R  C  R  S  C  Q  S  Y  G  C  R  *   : D  C  F  Y  R  V  H  R  N  W  *  S  C  R  R  C  S  C  K  E  Q  P  K  T  C  D  I  G  A  R  R  K  I  S  F  H  H  L  *  R  C  R  R  *  *  S  C  *  V  G  S  F  C  C  F  L  *  P   : G  T  M  L  L  C  W  I  S  D  I  R  T  *  K  S  I  *  *  I  C  G  E  S  Q  S  S  C  F  K  T  H  C  W  R  P  F  Q  E  G  S  *  T  R :   L  I  Q  S  N  L  R  R  S  *  S  T  *  N  L  V  L  K  A  G  L  L  S  S  L  E  G  K  N  W  V  P  R  A  S  M  S  N  L  L  S  S  Q  M  S  R :   I  T  C  *  L  P  E  M  R  Y  L  D  Q  C  S  P  S  *  N  S   : R  M  L  K  R  S  S  E  G  Q  T  R  H  I  M  G  W  Q  R  V  F  L  P  R  I  *  M  Q  P  T  Q  Y  L  E  P  L  E  *  G  Q  C  G  L  T  A  L  T  S  L  M  L  P  F  R  L  V  V  I  R  *  V  D  M  E  E  R  R  E  S  T  A  *  V  T  T  C  K  S  K  L  L  L  P  L  *  R  I  Q  H  G  C  S  F  P  P  C  F  L  V  L  L  R  C  R  A  T  R  Q  S  C  L  L  E  V  T  C  I  Q  C  R  *  D  Q  N  A  V  L  C  V  C  Y  C  L  L  L  T  S  Y  D  L  I  T  I  C  K  L  V  C  V  R  P  F  L  I  S  V  A  L  M  Q  N  R  I  L  C  L  S  F  V  G  M  *  *  I  I  Y  R  C  N  V  I  I  L  Y  Y  Y  G  I   </first_frame>
            <second_frame>  I  L  N  A  L  S  L  C  K  H  Y  A  L  Y  E  I  K  V  L  *  D  F  C  K  Q  L  *  K  F  L :   *  V  L  Q  L  L  E  K  G  Y  Q  K  V  L  *  Q  C  R  G  A  *  R  A  N  H  S  T  C  *  G  *  I  *  S  A  S  H  *  W  T  V  C  *  C  S  L  R :   E  D  I  S  Y  I  *  P  S  N  R  R  S  Y  Y  Y  G  C  G  G  R  H  *  R  C  Q  P  C  S  L  C  C  P  *  S  I  *  *  R  T  M  A  *  N  D  L  C  S  N  R  T  F  L  S  F  H  I  L  F  L  V  P  T  V  R  G  G  F  R  I  *  T  *  H  V  Q  P  L  R  F  L  S  L  N  T  L  I  Y  R  T  Y  V  F  R  F  *  Y  S  L  I  L  V  L  S  H  I  Y  L  F  P  V  L  Y  G  P  S  T  E  V  N  F  S  V  G  R  S  T  N  S  N  Y  L  S  N  I  S  H  F  L  C  *  R  K  L  E  S  S  *  K  M  T  S  *  D  N  N  Y  L  A  K  *  P  Y  E  K  S  I  R  L  C  R  Q  L  Q  L  V  *  T  P  S  L  T  *  A  C  T  I  M  Y  L  L  N  Q  I  F  P  G  K  V  M  Y  N  V  A  V  C  *  F  A  *  E  A  Q  *  *  T  C  S  T  *  D  L  G  *  G  K  A  L  R  T  S  C  K  *  R  N  T  N  A  H  S  S  F  Q  I  L  C  W  L  R  K  *  E  K  W  R  Y  V  S  F  *  Q  F  N  N  H  L  L  Y  I  N  *  R  S  N  V  C  *  I  T  L  N  A  F  L  S  I  S  A  Y  I  S  Y  S  G  W  A  D  K  I  H  G  L  T  A  P  A  D  S  L  H  H  V  Q  T  L  H  E  P  I  G  V  A  G  Q  I  I  P  W  N  F  P  L  L  M  F  A  W  K  V  G  P  A  L  A  C  G  N  T  V  V  L  K  P  A  E  Q  T  P  L  S  A  L  Y  V  S  K  L  F  H  E  :  V  G  L  P  P  G  V  L  N  V  I  P  G  S  G  S  A  G  A  D  L  A  S  H  M  D  V  D  K  :  I  A  F  T  G  S  T  E  T  G  K  A  V  V  G  A  A  A  K  S  N  L  K  P  V  T  L  E  L  G  G  K  S  P  F  I  I  C  E  D  A  D  V  D  K  A  V  E  L  A  H  S  A  V  F  F  N  Q  :  G  Q  C  C  C  A  G  S  R  T  F  V  H  E  R  V  Y  D  E  F  V  E  K  A  K  A  R  A  L  K  R  I  V  G  D  P  F  K  K  G  V  E  Q   : D  *  Y  R  A  I  *  E  D  P  E  V  H  K  I  W  Y  *  K  R  G  Y  S  R  V  W  R  G  K  I  G  F  Q  G  L  L  C  P  T  Y  C  L  L  K  C  P   : G  *  H  A  D  C  Q  R  *  D  I  W  T  S  A  V  P  L  E  I  Q  :  G  C  *  R  G  H  P  K  G  K  L  V  T  L  W  V  G  S  G  C  F  Y  P  E  Y  R  C  S  Q  H  N  I  S  S  P  *  S  R  D  S  V  G  *  L  L  *  H  L  *  C  C  H  S  V  W  W  L  *  D  E  W  T  W  K  R  E  G  S  L  Q  P  K  *  L  L  A  S  Q  S  Y  C  Y  P  S  E  E  S  S  M  A  V  V  F  P  P  A  F  W  Y  S  *  D  V  V  Q  H  G  N  L  V  F  *  R  S  L  V  Y  S  V  D  K  T  K  T  L  Y  C  V  C  V  I  V  C  Y  *  L  L  M  I  *  *  Q  Y  A  N  L  F  V  *  D  L  S  *  F  L  *  L  *  C  K  I  G  S  C  V  *  V  L  W  E  C  N  E  L  Y  I  D  V  M  L  *  F  Y  I  T  T  V  Y  </second_frame>
            <third_frame>   F  *  M  L  S  L  Y  V  N  I  M  L  C  M  K  *  R  S  S  K  I  S  V  S  N  F  E  N  F   : F  R  Y  S  N  Y  W  R  K  G  I  R  R  F  C  S  S  A  V  V  H  E  E  P  I  T  P  P  V  E  V  K  Y  N  Q  L  L  I  N  G  Q  F  V  D  A  A  S   : G  K  T  F  P  T  F  D  P  R  T  G  E  A  I  T  T  V  A  E  A  D  T  E  D  V  N  R  A  V  F  A  A  R  K  A  F  D  E  G  P  W  P  K  M  T  C  A  V  T  E  L  S  Y  L  S  I  S  S  S  L  S  Q  Q  *  E  A  D  L  E  F  E  L  N  M  F  N  L  *  G  S  Y  R  *  T  H  *  S  I  G  H  T  C  L  D  F  N  I  L  S  F  *  Y  F  H  I  Y  I  Y  F  L  Y  Y  M  V  P  L  P  K  L  I  S  Q  L  V  V  Q  L  I  V  I  I  *  V  I  *  V  T  F  F  V  E  E  N  W  N  Q  V  E  K  *  L  L  E  I  I  T  I  *  Q  S  D  H  M  R  N  Q  S  A  S  A  D  N  Y  S  L  F  K  L  P  V  L  L  K  H  V  Q  *  C  T  Y  L  T  K  Y  F  Q  E  R  S  C  I  M  L  Q  F  A  D  L  L  E  R  H  S  D  E  L  A  A  L  E  T  W  D  K  G  K  P  Y  E  Q  A  A  N  E  E  I  P  M  L  I  R  L  F  R  Y  Y  A  G  *  E  N  K  K  N  G  V  M  F  P  F  D  S  L  I  T  T  Y  C  I  S  I  D  V  L  M  F  A  E  S  P  *  M  L  F  *  V  F  L  L  T  F  L  I  Q  V  G  L  I  K  F  M  V  L  Q  L  L  L  T  V  C  T  M  F  R  P  C  M  S  Q  L  V  L  Q  D  R  *  Y  P  G  I  F  R  Y  *  C  S  P  G  K  L  A  L  H  L  L  V  V  T  L  S  Y  *  N  Q  Q  N  K  H  H  S  L  P  C  M  C  Q  S  Y  S  M  R :   L  D  F  P  L  E  S  *  M  S  F  L  D  P  V  V  Q  V  Q  I  L  P  V  I  W  M  S  I  R :   L  L  L  Q  G  P  Q  K  L  V  K  L  S  *  V  Q  L  Q  R  A  T  *  N  L  *  H  W  S  S  E  E  N  L  L  S  S  F  V  K  M  Q  T  L  I  K  L  L  S  W  L  I  L  L  F  S  L  T  R :   D  N  A  A  V  L  D  L  G  H  S  Y  M  K  E  Y  M  M  N  L  W  R  K  P  K  L  V  L  *  N  A  L  L  E  T  L  S  R  R  E  L  N  K  :  I  D  T  E  Q  F  E  K  I  L  K  Y  I  K  S  G  T  E  S  G  A  T  L  E  S  G  G  E  K  L  G  S  K  G  F  Y  V  Q  P  T  V  F  S  N  V  Q  :  D  N  M  L  I  A  R  D  E  I  F  G  P  V  Q  S  L  L  K  F  K :   D  V  E  E  V  I  R  R  A  N  S  S  H  Y  G  L  A  A  G  V  F  T  Q  N  I  D  A  A  N  T  I  S  R  A  L  R  V  G  T  V  W  V  N  C  F  N  I  F  D  A  A  I  P  F  G  G  Y  K  M  S  G  H  G  R  E  K  G  V  Y  S  L  S  N  Y  L  Q  V  K  A  I  V  T  P  L  K  N  P  A  W  L  *  F  S  P  L  L  S  G  T  P  E  M  S  C  N  T  A  I  L  S  F  R  G  H  L  Y  T  V  *  I  R  P  K  R  C  I  V  C  V  L  L  F  V  T  N  F  L  *  F  D  N  N  M  Q  T  C  L  C  E  T  F  L  D  F  C  S  S  D  A  K  *  D  L  V  F  E  F  C  G  N  V  M  N  Y  I  *  M  *  C  Y  N  S  I  L  L  R  Y  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29252" stop="29530"/>
                    <exon start="29750" stop="29836"/>
                    <exon start="30480" stop="30653"/>
                    <exon start="30733" stop="30862"/>
                    <exon start="31151" stop="31155"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>672</number_coding_nucleotides>
                  <number_encoded_amino_acids>224</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ITLNAFLSISAYISYSGWADKIHGLTAPADSLHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKPAEQTPLSALYVSKLFHEVGLPPGVLNVIPGSGSAGADLASHMDVDKIAFTGSTETGKAVVGAAAKSNLKPVTLELGGKSPFIICEDADVDKAVELAHSAVFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRIVGDPFKKGVEQD*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26475" stop="26514"/>
                    <exon start="28197" stop="28337"/>
                    <exon start="28417" stop="28610"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>372</number_coding_nucleotides>
                  <number_encoded_amino_acids>124</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSSKISVSNFENFFRYSNYWRKGIRRFCSSAVVHEEPITPPVEVKYNQLLINGQFVDAASGKTFPTFDPRTGEAITTVAEADTEDVNRAVFAARKAFDEGPWPKMTCAVTELSYLSISSSLSQQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="26425" e_stop="26514"/>
            <exon e_start="28197" e_stop="28337"/>
            <exon e_start="28417" e_stop="29183"/>
            <exon e_start="29301" e_stop="29530"/>
            <exon e_start="29750" e_stop="29836"/>
            <exon e_start="30480" e_stop="30653"/>
            <exon e_start="30733" e_stop="30870"/>
            <exon e_start="31151" e_stop="31288"/>
            <exon e_start="31398" e_stop="31459"/>
            <exon e_start="31539" e_stop="32103"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.901" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.750" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.997" e_score="0.981"/>
          <exon-intron don_prob="0.959" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.933" acc_prob="0.857" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.920" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="26425" e_stop="26514" e_length="90"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.901">
            <gDNA_intron_boundary i_start="26515" i_stop="28196" i_length="1682"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="28197" e_stop="28337" e_length="141"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.750">
            <gDNA_intron_boundary i_start="28338" i_stop="28416" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="0.981">
            <gDNA_exon_boundary e_start="28417" e_stop="29183" e_length="767"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="29184" i_stop="29300" i_length="117"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="29301" e_stop="29530" e_length="230"/>
          </exon>
          <intron i_serial="4" don_prob="0.959" acc_prob="0.980">
            <gDNA_intron_boundary i_start="29531" i_stop="29749" i_length="219"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="29750" e_stop="29836" e_length="87"/>
          </exon>
          <intron i_serial="5" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="29837" i_stop="30479" i_length="643"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="30480" e_stop="30653" e_length="174"/>
          </exon>
          <intron i_serial="6" don_prob="0.933" acc_prob="0.857">
            <gDNA_intron_boundary i_start="30654" i_stop="30732" i_length="79"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="30733" e_stop="30870" e_length="138"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.996">
            <gDNA_intron_boundary i_start="30871" i_stop="31150" i_length="280"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="31151" e_stop="31288" e_length="138"/>
          </exon>
          <intron i_serial="8" don_prob="0.961" acc_prob="0.997">
            <gDNA_intron_boundary i_start="31289" i_stop="31397" i_length="109"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="31398" e_stop="31459" e_length="62"/>
          </exon>
          <intron i_serial="9" don_prob="0.995" acc_prob="0.920">
            <gDNA_intron_boundary i_start="31460" i_stop="31538" i_length="79"/>
          </intron>
          <exon e_serial="10" e_score="0.998">
            <gDNA_exon_boundary e_start="31539" e_stop="32103" e_length="565"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26425" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256721" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26426" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28755"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271992" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26427" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28606"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258160" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26427" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28539"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217486" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28464" stop="28868"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336972" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28534" stop="29009"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324375" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28851" stop="29127"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261296" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29008" stop="29183"/>
              <exon start="29301" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30566"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29008" stop="29183"/>
              <exon start="29301" stop="29530"/>
              <exon start="29750" stop="29789"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248945" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29373" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249288" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29417" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30828"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275091" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29526" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="31693"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261730" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29776" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31411"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255543" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30511" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229381" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30539" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31206"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229740" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30782" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="32085"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542978" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30865" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31434"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264242" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31190" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="31872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264163" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31218" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="32103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355126" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31218" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="32103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349395" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31399" stop="31459"/>
              <exon start="31539" stop="32049"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31399" stop="31459"/>
              <exon start="31539" stop="31840"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281400" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31431" stop="31459"/>
              <exon start="31539" stop="31981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733861" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31540" stop="31956"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256282" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT : TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG : GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGC : GTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG : GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAG : ATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAG : GGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAG : ATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAG : GATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAA : GGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTTAGAGGTCACTTGTATACAGTGTAGATAAGACCAAAACGCTGTATTGTGTGTGTGTTATTGTTTGTTACTAACTTCTTATGATTTGATAACAATATGCAAACTTGTTTGTGTGAGACCTTTCTTGATTTCTGTAGCTCTGATGCAAAATAGGATCTTGTGTTTGAGTTTTGTGGGAATGTAATGAATTATATATAGATGTAATGTTATAATTCTATATTACTACGGTATATA</gDNA_template>
            <first_frame> N  F  E  C  S  L  F  M  *  T  L  C  F  V  *  N  K  G  P  L  R  F  L  *  A  T  L  K  I  S  :  L  G  T  P  T  T  G  E  R  V  S  E  G  F  V  A  V  P  W  C  M  K  S  Q  S  L  H  L  L  R  L  N  I  I  S  F  S  L  M  D  S  L  L  M  Q  P  Q  :  G  R  H  F  L  H  L  T  L  E  Q  A  K  L  L  L  R  L  R  R  P  T  L  K  M  S  T  V  Q  S  L  L  P  V  K  H  L  M  K  D  H  G  L  K  *  L  V  Q  *  P  N  F  L  I  F  P  Y  P  L  P  C  P  N  S  E  R  R  I  *  N  L  N  L  T  C  S  T  F  K  V  L  I  A  E  H  I  D  L  S  D  I  R  V  *  I  L  I  F  S  H  F  S  T  F  T  Y  I  F  I  S  C  I  I  W  S  L  Y  R  S  *  F  L  S  W  S  F  N  *  *  *  L  F  E  *  Y  K  S  L  S  L  L  K  K  I  G  I  K  L  K  N  D  F  L  R  *  *  L  F  S  K  V  T  I  *  E  I  N  P  P  L  Q  T  T  T  A  C  L  N  S  Q  S  Y  L  S  M  Y  N  N  V  L  T  *  P  N  I  S  R  K  G  H  V  *  C  C  S  L  L  I  C  L  R  G  T  V  M  N  L  Q  H  L  R  L  G  I  R  E  S  L  T  N  K  L  Q  M  K  K  Y  Q  C  S  F  V  F  S  D  T  M  L  V  K  K  I  R  K  M  A :   L  G  *  *  N  S  W  S  Y  S  S  C  *  Q  F  A  P  C  S  D  P  A  *  A  N  W  C  C  R  T  D  N  T  L  E  F  S  V  I  N  V  R  L  E  S  W  P  C  T  C  L  W  *  H  C  R  T  K  T  S  R  T  N  T  T  L  C  P  V  C  V  K  V  I  P  *   : G  W  T  S  P  W  S  L  K  C  H  S  W  I  R  *  C  R  C  R  S  C  Q  S  Y  G  C  R  *   : D  C  F  Y  R  V  H  R  N  W  *  S  C  R  R  C  S  C  K  E  Q  P  K  T  C  D  I  G  A  R  R  K  I  S  F  H  H  L  *  R  C  R  R  *  *  S  C  *  V  G  S  F  C  C  F  L  *  P   : G  T  M  L  L  C  W  I  S  D  I  R  T  *  K  S  I  *  *  I  C  G  E  S  Q  S  S  C  F  K  T  H  C  W  R  P  F  Q  E  G  S  *  T  R  S  A   : D  *  Y  R  A  I  *  E  D  P  E  V  H  K  I  W  Y  *  K  R  G  Y  S  R  V  W  R  G  K  I  G  F  Q  G  L  L  C  P  T  Y  C  L  L  K  C  P   : G  *  H  A  D  C  Q  R  *  D  I  W  T  S  A  V  P  L  E  I  Q  :  G  C  *  R  G  H  P  K  G  K  L  V  T  L  W  V  G  S  G  C  F  Y  P  E  Y  R  C  S  Q  H  N  I  S  S  P  *  S  R  D  S  V  G  *  L  L  *  H  L  *  C  C  H  S  V  W  W  L  *  D  E  W  T  W  K  R  E  G  S  L  Q  P  K  *  L  L  A  S  Q  S  Y  C  Y  P  S  E  E  S  S  M  A  V  V  F  P  P  A  F  W  Y  S  *  D  V  V  Q  H  G  N  L  V  F  *  R  S  L  V  Y  S  V  D  K  T  K  T  L  Y  C  V  C  V  I  V  C  Y  *  L  L  M  I  *  *  Q  Y  A  N  L  F  V  *  D  L  S  *  F  L  *  L  *  C  K  I  G  S  C  V  *  V  L  W  E  C  N  E  L  Y  I  D  V  M  L  *  F  Y  I  T  T  V  Y  </first_frame>
            <second_frame>  I  L  N  A  L  S  L  C  K  H  Y  A  L  Y  E  I  K  V  L  *  D  F  C  K  Q  L  *  K  F  L :   *  V  L  Q  L  L  E  K  G  Y  Q  K  V  L  *  Q  C  R  G  A  *  R  A  N  H  S  T  C  *  G  *  I  *  S  A  S  H  *  W  T  V  C  *  C  S  L  R :   E  D  I  S  Y  I  *  P  S  N  R  R  S  Y  Y  Y  G  C  G  G  R  H  *  R  C  Q  P  C  S  L  C  C  P  *  S  I  *  *  R  T  M  A  *  N  D  L  C  S  N  R  T  F  L  S  F  H  I  L  F  L  V  P  T  V  R  G  G  F  R  I  *  T  *  H  V  Q  P  L  R  F  L  S  L  N  T  L  I  Y  R  T  Y  V  F  R  F  *  Y  S  L  I  L  V  L  S  H  I  Y  L  F  P  V  L  Y  G  P  S  T  E  V  N  F  S  V  G  R  S  T  N  S  N  Y  L  S  N  I  S  H  F  L  C  *  R  K  L  E  S  S  *  K  M  T  S  *  D  N  N  Y  L  A  K  *  P  Y  E  K  S  I  R  L  C  R  Q  L  Q  L  V  *  T  P  S  L  T  *  A  C  T  I  M  Y  L  L  N  Q  I  F  P  G  K  V  M  Y  N  V  A  V  C  *  F  A  *  E  A  Q  *  *  T  C  S  T  *  D  L  G  *  G  K  A  L  R  T  S  C  K  *  R  N  T  N  A  H  S  S  F  Q  I  L  C  W  L  R  K  *  E  K  W   : R  W  A  D  K  I  H  G  L  T  A  P  A  D  S  L  H  H  V  Q  T  L  H  E  P  I  G  V  A  G  Q  I  I  P  W  N  F  P  L  L  M  F  A  W  K  V  G  P  A  L  A  C  G  N  T  V  V  L  K  P  A  E  Q  T  P  L  S  A  L  Y  V  S  K  L  F  H  E  :  V  G  L  P  P  G  V  L  N  V  I  P  G  S  G  S  A  G  A  D  L  A  S  H  M  D  V  D  K  :  I  A  F  T  G  S  T  E  T  G  K  A  V  V  G  A  A  A  K  S  N  L  K  P  V  T  L  E  L  G  G  K  S  P  F  I  I  C  E  D  A  D  V  D  K  A  V  E  L  A  H  S  A  V  F  F  N  Q  :  G  Q  C  C  C  A  G  S  R  T  F  V  H  E  R  V  Y  D  E  F  V  E  K  A  K  A  R  A  L  K  R  I  V  G  D  P  F  K  K  G  V  E  Q  G  P  Q  :  I  D  T  E  Q  F  E  K  I  L  K  Y  I  K  S  G  T  E  S  G  A  T  L  E  S  G  G  E  K  L  G  S  K  G  F  Y  V  Q  P  T  V  F  S  N  V  Q  :  D  N  M  L  I  A  R  D  E  I  F  G  P  V  Q  S  L  L  K  F  K :   D  V  E  E  V  I  R  R  A  N  S  S  H  Y  G  L  A  A  G  V  F  T  Q  N  I  D  A  A  N  T  I  S  R  A  L  R  V  G  T  V  W  V  N  C  F  N  I  F  D  A  A  I  P  F  G  G  Y  K  M  S  G  H  G  R  E  K  G  V  Y  S  L  S  N  Y  L  Q  V  K  A  I  V  T  P  L  K  N  P  A  W  L  *  F  S  P  L  L  S  G  T  P  E  M  S  C  N  T  A  I  L  S  F  R  G  H  L  Y  T  V  *  I  R  P  K  R  C  I  V  C  V  L  L  F  V  T  N  F  L  *  F  D  N  N  M  Q  T  C  L  C  E  T  F  L  D  F  C  S  S  D  A  K  *  D  L  V  F  E  F  C  G  N  V  M  N  Y  I  *  M  *  C  Y  N  S  I  L  L  R  Y  I </second_frame>
            <third_frame>   F  *  M  L  S  L  Y  V  N  I  M  L  C  M  K  *  R  S  S  K  I  S  V  S  N  F  E  N  F   : F  R  Y  S  N  Y  W  R  K  G  I  R  R  F  C  S  S  A  V  V  H  E  E  P  I  T  P  P  V  E  V  K  Y  N  Q  L  L  I  N  G  Q  F  V  D  A  A  S   : G  K  T  F  P  T  F  D  P  R  T  G  E  A  I  T  T  V  A  E  A  D  T  E  D  V  N  R  A  V  F  A  A  R  K  A  F  D  E  G  P  W  P  K  M  T  C  A  V  T  E  L  S  Y  L  S  I  S  S  S  L  S  Q  Q  *  E  A  D  L  E  F  E  L  N  M  F  N  L  *  G  S  Y  R  *  T  H  *  S  I  G  H  T  C  L  D  F  N  I  L  S  F  *  Y  F  H  I  Y  I  Y  F  L  Y  Y  M  V  P  L  P  K  L  I  S  Q  L  V  V  Q  L  I  V  I  I  *  V  I  *  V  T  F  F  V  E  E  N  W  N  Q  V  E  K  *  L  L  E  I  I  T  I  *  Q  S  D  H  M  R  N  Q  S  A  S  A  D  N  Y  S  L  F  K  L  P  V  L  L  K  H  V  Q  *  C  T  Y  L  T  K  Y  F  Q  E  R  S  C  I  M  L  Q  F  A  D  L  L  E  R  H  S  D  E  L  A  A  L  E  T  W  D  K  G  K  P  Y  E  Q  A  A  N  E  E  I  P  M  L  I  R  L  F  R  Y  Y  A  G  *  E  N  K  K  N  G  :  V  G  L  I  K  F  M  V  L  Q  L  L  L  T  V  C  T  M  F  R  P  C  M  S  Q  L  V  L  Q  D  R  *  Y  P  G  I  F  R  Y  *  C  S  P  G  K  L  A  L  H  L  L  V  V  T  L  S  Y  *  N  Q  Q  N  K  H  H  S  L  P  C  M  C  Q  S  Y  S  M  R :   L  D  F  P  L  E  S  *  M  S  F  L  D  P  V  V  Q  V  Q  I  L  P  V  I  W  M  S  I  R :   L  L  L  Q  G  P  Q  K  L  V  K  L  S  *  V  Q  L  Q  R  A  T  *  N  L  *  H  W  S  S  E  E  N  L  L  S  S  F  V  K  M  Q  T  L  I  K  L  L  S  W  L  I  L  L  F  S  L  T  R :   D  N  A  A  V  L  D  L  G  H  S  Y  M  K  E  Y  M  M  N  L  W  R  K  P  K  L  V  L  *  N  A  L  L  E  T  L  S  R  R  E  L  N  K  V  R  R :   L  I  Q  S  N  L  R  R  S  *  S  T  *  N  L  V  L  K  A  G  L  L  S  S  L  E  G  K  N  W  V  P  R  A  S  M  S  N  L  L  S  S  Q  M  S  R :   I  T  C  *  L  P  E  M  R  Y  L  D  Q  C  S  P  S  *  N  S   : R  M  L  K  R  S  S  E  G  Q  T  R  H  I  M  G  W  Q  R  V  F  L  P  R  I  *  M  Q  P  T  Q  Y  L  E  P  L  E  *  G  Q  C  G  L  T  A  L  T  S  L  M  L  P  F  R  L  V  V  I  R  *  V  D  M  E  E  R  R  E  S  T  A  *  V  T  T  C  K  S  K  L  L  L  P  L  *  R  I  Q  H  G  C  S  F  P  P  C  F  L  V  L  L  R  C  R  A  T  R  Q  S  C  L  L  E  V  T  C  I  Q  C  R  *  D  Q  N  A  V  L  C  V  C  Y  C  L  L  L  T  S  Y  D  L  I  T  I  C  K  L  V  C  V  R  P  F  L  I  S  V  A  L  M  Q  N  R  I  L  C  L  S  F  V  G  M  *  *  I  I  Y  R  C  N  V  I  I  L  Y  Y  Y  G  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29174" stop="29183"/>
                    <exon start="29301" stop="29530"/>
                    <exon start="29750" stop="29836"/>
                    <exon start="30480" stop="30653"/>
                    <exon start="30733" stop="30870"/>
                    <exon start="31151" stop="31288"/>
                    <exon start="31398" stop="31459"/>
                    <exon start="31539" stop="31812"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1110</number_coding_nucleotides>
                  <number_encoded_amino_acids>370</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKWRWADKIHGLTAPADSLHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKPAEQTPLSALYVSKLFHEVGLPPGVLNVIPGSGSAGADLASHMDVDKIAFTGSTETGKAVVGAAAKSNLKPVTLELGGKSPFIICEDADVDKAVELAHSAVFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRIVGDPFKKGVEQGPQIDTEQFEKILKYIKSGTESGATLESGGEKLGSKGFYVQPTVFSNVQDNMLIARDEIFGPVQSLLKFKDVEEVIRRANSSHYGLAAGVFTQNIDAANTISRALRVGTVWVNCFNIFDAAIPFGGYKMSGHGREKGVYSLSNYLQVKAIVTPLKNPAWL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26475" stop="26514"/>
                    <exon start="28197" stop="28337"/>
                    <exon start="28417" stop="28610"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>372</number_coding_nucleotides>
                  <number_encoded_amino_acids>124</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSSKISVSNFENFFRYSNYWRKGIRRFCSSAVVHEEPITPPVEVKYNQLLINGQFVDAASGKTFPTFDPRTGEAITTVAEADTEDVNRAVFAARKAFDEGPWPKMTCAVTELSYLSISSSLSQQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="26427" e_stop="26514"/>
            <exon e_start="28197" e_stop="28337"/>
            <exon e_start="28417" e_stop="28653"/>
            <exon e_start="29007" e_stop="29530"/>
            <exon e_start="29750" e_stop="29836"/>
            <exon e_start="30480" e_stop="30653"/>
            <exon e_start="30733" e_stop="30870"/>
            <exon e_start="31151" e_stop="31288"/>
            <exon e_start="31398" e_stop="31459"/>
            <exon e_start="31539" e_stop="32103"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.901" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.750" e_score="0.986"/>
          <exon-intron don_prob="0.177" acc_prob="0.922" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.933" acc_prob="0.857" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.920" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="26427" e_stop="26514" e_length="88"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.901">
            <gDNA_intron_boundary i_start="26515" i_stop="28196" i_length="1682"/>
          </intron>
          <exon e_serial="2" e_score="0.986">
            <gDNA_exon_boundary e_start="28197" e_stop="28337" e_length="141"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.750">
            <gDNA_intron_boundary i_start="28338" i_stop="28416" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="28417" e_stop="28653" e_length="237"/>
          </exon>
          <intron i_serial="3" don_prob="0.177" acc_prob="0.922">
            <gDNA_intron_boundary i_start="28654" i_stop="29006" i_length="353"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="29007" e_stop="29530" e_length="524"/>
          </exon>
          <intron i_serial="4" don_prob="0.959" acc_prob="0.980">
            <gDNA_intron_boundary i_start="29531" i_stop="29749" i_length="219"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="29750" e_stop="29836" e_length="87"/>
          </exon>
          <intron i_serial="5" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="29837" i_stop="30479" i_length="643"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="30480" e_stop="30653" e_length="174"/>
          </exon>
          <intron i_serial="6" don_prob="0.933" acc_prob="0.857">
            <gDNA_intron_boundary i_start="30654" i_stop="30732" i_length="79"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="30733" e_stop="30870" e_length="138"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.996">
            <gDNA_intron_boundary i_start="30871" i_stop="31150" i_length="280"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="31151" e_stop="31288" e_length="138"/>
          </exon>
          <intron i_serial="8" don_prob="0.961" acc_prob="0.997">
            <gDNA_intron_boundary i_start="31289" i_stop="31397" i_length="109"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="31398" e_stop="31459" e_length="62"/>
          </exon>
          <intron i_serial="9" don_prob="0.995" acc_prob="0.920">
            <gDNA_intron_boundary i_start="31460" i_stop="31538" i_length="79"/>
          </intron>
          <exon e_serial="10" e_score="0.998">
            <gDNA_exon_boundary e_start="31539" e_stop="32103" e_length="565"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26427" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28606"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258160" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26427" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28539"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217486" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28288" stop="28337"/>
              <exon start="28417" stop="28653"/>
              <exon start="29007" stop="29266"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246766" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29025" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30624"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29025" stop="29530"/>
              <exon start="29750" stop="29799"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271439" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29063" stop="29530"/>
              <exon start="29750" stop="29776"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249362" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29075" stop="29530"/>
              <exon start="29750" stop="29785"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314892" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29075" stop="29476"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314995" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29176" stop="29466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257422" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29373" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249288" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29417" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30828"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275091" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29526" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="31693"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261730" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29776" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31411"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255543" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30511" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229381" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30539" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31206"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229740" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30782" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="32085"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542978" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30865" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31434"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264242" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31190" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="31872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264163" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31218" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="32103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355126" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31218" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="32103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349395" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31399" stop="31459"/>
              <exon start="31539" stop="32049"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31399" stop="31459"/>
              <exon start="31539" stop="31840"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281400" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31431" stop="31459"/>
              <exon start="31539" stop="31981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733861" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31540" stop="31956"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256282" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT : TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG : GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAG : GAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG : GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAG : ATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAG : GGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAG : ATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAG : GATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAA : GGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTTAGAGGTCACTTGTATACAGTGTAGATAAGACCAAAACGCTGTATTGTGTGTGTGTTATTGTTTGTTACTAACTTCTTATGATTTGATAACAATATGCAAACTTGTTTGTGTGAGACCTTTCTTGATTTCTGTAGCTCTGATGCAAAATAGGATCTTGTGTTTGAGTTTTGTGGGAATGTAATGAATTATATATAGATGTAATGTTATAATTCTATATTACTACGGTATATA</gDNA_template>
            <first_frame> F  *  M  L  S  L  Y  V  N  I  M  L  C  M  K  *  R  S  S  K  I  S  V  S  N  F  E  N  F   : F  R  Y  S  N  Y  W  R  K  G  I  R  R  F  C  S  S  A  V  V  H  E  E  P  I  T  P  P  V  E  V  K  Y  N  Q  L  L  I  N  G  Q  F  V  D  A  A  S   : G  K  T  F  P  T  F  D  P  R  T  G  E  A  I  T  T  V  A  E  A  D  T  E  D  V  N  R  A  V  F  A  A  R  K  A  F  D  E  G  P  W  P  K  M  T  C  A  V  T  E  L  S  Y  L  S  I  S  S  S  L  S  Q  Q  *  E  A  D  L  E  F  E  L  N  M  F  N  L  *   : G  K  V  M  Y  N  V  A  V  C  *  F  A  *  E  A  Q  *  *  T  C  S  T  *  D  L  G  *  G  K  A  L  R  T  S  C  K  *  R  N  T  N  A  H  S  S  F  Q  I  L  C  W  L  R  K  *  E  K  W  R  Y  V  S  F  *  Q  F  N  N  H  L  L  Y  I  N  *  R  S  N  V  C  *  I  T  L  N  A  F  L  S  I  S  A  Y  I  S  Y  S  G  W  A  D  K  I  H  G  L  T  A  P  A  D  S  L  H  H  V  Q  T  L  H  E  P  I  G  V  A  G  Q  I  I  P  W  N  F  P  L  L  M  F  A  W  K  V  G  P  A  L  A  C  G  N  T  V  V  L  K  P  A  E  Q  T  P  L  S  A  L  Y  V  S  K  L  F  H  E  :  V  G  L  P  P  G  V  L  N  V  I  P  G  S  G  S  A  G  A  D  L  A  S  H  M  D  V  D  K  :  I  A  F  T  G  S  T  E  T  G  K  A  V  V  G  A  A  A  K  S  N  L  K  P  V  T  L  E  L  G  G  K  S  P  F  I  I  C  E  D  A  D  V  D  K  A  V  E  L  A  H  S  A  V  F  F  N  Q  :  G  Q  C  C  C  A  G  S  R  T  F  V  H  E  R  V  Y  D  E  F  V  E  K  A  K  A  R  A  L  K  R  I  V  G  D  P  F  K  K  G  V  E  Q  G  P  Q  :  I  D  T  E  Q  F  E  K  I  L  K  Y  I  K  S  G  T  E  S  G  A  T  L  E  S  G  G  E  K  L  G  S  K  G  F  Y  V  Q  P  T  V  F  S  N  V  Q  :  D  N  M  L  I  A  R  D  E  I  F  G  P  V  Q  S  L  L  K  F  K :   D  V  E  E  V  I  R  R  A  N  S  S  H  Y  G  L  A  A  G  V  F  T  Q  N  I  D  A  A  N  T  I  S  R  A  L  R  V  G  T  V  W  V  N  C  F  N  I  F  D  A  A  I  P  F  G  G  Y  K  M  S  G  H  G  R  E  K  G  V  Y  S  L  S  N  Y  L  Q  V  K  A  I  V  T  P  L  K  N  P  A  W  L  *  F  S  P  L  L  S  G  T  P  E  M  S  C  N  T  A  I  L  S  F  R  G  H  L  Y  T  V  *  I  R  P  K  R  C  I  V  C  V  L  L  F  V  T  N  F  L  *  F  D  N  N  M  Q  T  C  L  C  E  T  F  L  D  F  C  S  S  D  A  K  *  D  L  V  F  E  F  C  G  N  V  M  N  Y  I  *  M  *  C  Y  N  S  I  L  L  R  Y  I </first_frame>
            <second_frame>  F  E  C  S  L  F  M  *  T  L  C  F  V  *  N  K  G  P  L  R  F  L  *  A  T  L  K  I  S  :  L  G  T  P  T  T  G  E  R  V  S  E  G  F  V  A  V  P  W  C  M  K  S  Q  S  L  H  L  L  R  L  N  I  I  S  F  S  L  M  D  S  L  L  M  Q  P  Q  :  G  R  H  F  L  H  L  T  L  E  Q  A  K  L  L  L  R  L  R  R  P  T  L  K  M  S  T  V  Q  S  L  L  P  V  K  H  L  M  K  D  H  G  L  K  *  L  V  Q  *  P  N  F  L  I  F  P  Y  P  L  P  C  P  N  S  E  R  R  I  *  N  L  N  L  T  C  S  T  F  K  :  E  R  S  C  I  M  L  Q  F  A  D  L  L  E  R  H  S  D  E  L  A  A  L  E  T  W  D  K  G  K  P  Y  E  Q  A  A  N  E  E  I  P  M  L  I  R  L  F  R  Y  Y  A  G  *  E  N  K  K  N  G  V  M  F  P  F  D  S  L  I  T  T  Y  C  I  S  I  D  V  L  M  F  A  E  S  P  *  M  L  F  *  V  F  L  L  T  F  L  I  Q  V  G  L  I  K  F  M  V  L  Q  L  L  L  T  V  C  T  M  F  R  P  C  M  S  Q  L  V  L  Q  D  R  *  Y  P  G  I  F  R  Y  *  C  S  P  G  K  L  A  L  H  L  L  V  V  T  L  S  Y  *  N  Q  Q  N  K  H  H  S  L  P  C  M  C  Q  S  Y  S  M  R :   L  D  F  P  L  E  S  *  M  S  F  L  D  P  V  V  Q  V  Q  I  L  P  V  I  W  M  S  I  R :   L  L  L  Q  G  P  Q  K  L  V  K  L  S  *  V  Q  L  Q  R  A  T  *  N  L  *  H  W  S  S  E  E  N  L  L  S  S  F  V  K  M  Q  T  L  I  K  L  L  S  W  L  I  L  L  F  S  L  T  R :   D  N  A  A  V  L  D  L  G  H  S  Y  M  K  E  Y  M  M  N  L  W  R  K  P  K  L  V  L  *  N  A  L  L  E  T  L  S  R  R  E  L  N  K  V  R  R :   L  I  Q  S  N  L  R  R  S  *  S  T  *  N  L  V  L  K  A  G  L  L  S  S  L  E  G  K  N  W  V  P  R  A  S  M  S  N  L  L  S  S  Q  M  S  R :   I  T  C  *  L  P  E  M  R  Y  L  D  Q  C  S  P  S  *  N  S   : R  M  L  K  R  S  S  E  G  Q  T  R  H  I  M  G  W  Q  R  V  F  L  P  R  I  *  M  Q  P  T  Q  Y  L  E  P  L  E  *  G  Q  C  G  L  T  A  L  T  S  L  M  L  P  F  R  L  V  V  I  R  *  V  D  M  E  E  R  R  E  S  T  A  *  V  T  T  C  K  S  K  L  L  L  P  L  *  R  I  Q  H  G  C  S  F  P  P  C  F  L  V  L  L  R  C  R  A  T  R  Q  S  C  L  L  E  V  T  C  I  Q  C  R  *  D  Q  N  A  V  L  C  V  C  Y  C  L  L  L  T  S  Y  D  L  I  T  I  C  K  L  V  C  V  R  P  F  L  I  S  V  A  L  M  Q  N  R  I  L  C  L  S  F  V  G  M  *  *  I  I  Y  R  C  N  V  I  I  L  Y  Y  Y  G  I   </second_frame>
            <third_frame>   L  N  A  L  S  L  C  K  H  Y  A  L  Y  E  I  K  V  L  *  D  F  C  K  Q  L  *  K  F  L :   *  V  L  Q  L  L  E  K  G  Y  Q  K  V  L  *  Q  C  R  G  A  *  R  A  N  H  S  T  C  *  G  *  I  *  S  A  S  H  *  W  T  V  C  *  C  S  L  R :   E  D  I  S  Y  I  *  P  S  N  R  R  S  Y  Y  Y  G  C  G  G  R  H  *  R  C  Q  P  C  S  L  C  C  P  *  S  I  *  *  R  T  M  A  *  N  D  L  C  S  N  R  T  F  L  S  F  H  I  L  F  L  V  P  T  V  R  G  G  F  R  I  *  T  *  H  V  Q  P  L  R :   K  G  H  V  *  C  C  S  L  L  I  C  L  R  G  T  V  M  N  L  Q  H  L  R  L  G  I  R  E  S  L  T  N  K  L  Q  M  K  K  Y  Q  C  S  F  V  F  S  D  T  M  L  V  K  K  I  R  K  M  A  L  C  F  L  L  T  V  *  *  P  L  I  V  Y  Q  L  T  F  *  C  L  L  N  H  P  K  C  F  S  K  Y  F  C  L  H  F  L  F  R  L  G  *  *  N  S  W  S  Y  S  S  C  *  Q  F  A  P  C  S  D  P  A  *  A  N  W  C  C  R  T  D  N  T  L  E  F  S  V  I  N  V  R  L  E  S  W  P  C  T  C  L  W  *  H  C  R  T  K  T  S  R  T  N  T  T  L  C  P  V  C  V  K  V  I  P  *   : G  W  T  S  P  W  S  L  K  C  H  S  W  I  R  *  C  R  C  R  S  C  Q  S  Y  G  C  R  *   : D  C  F  Y  R  V  H  R  N  W  *  S  C  R  R  C  S  C  K  E  Q  P  K  T  C  D  I  G  A  R  R  K  I  S  F  H  H  L  *  R  C  R  R  *  *  S  C  *  V  G  S  F  C  C  F  L  *  P   : G  T  M  L  L  C  W  I  S  D  I  R  T  *  K  S  I  *  *  I  C  G  E  S  Q  S  S  C  F  K  T  H  C  W  R  P  F  Q  E  G  S  *  T  R  S  A   : D  *  Y  R  A  I  *  E  D  P  E  V  H  K  I  W  Y  *  K  R  G  Y  S  R  V  W  R  G  K  I  G  F  Q  G  L  L  C  P  T  Y  C  L  L  K  C  P   : G  *  H  A  D  C  Q  R  *  D  I  W  T  S  A  V  P  L  E  I  Q  :  G  C  *  R  G  H  P  K  G  K  L  V  T  L  W  V  G  S  G  C  F  Y  P  E  Y  R  C  S  Q  H  N  I  S  S  P  *  S  R  D  S  V  G  *  L  L  *  H  L  *  C  C  H  S  V  W  W  L  *  D  E  W  T  W  K  R  E  G  S  L  Q  P  K  *  L  L  A  S  Q  S  Y  C  Y  P  S  E  E  S  S  M  A  V  V  F  P  P  A  F  W  Y  S  *  D  V  V  Q  H  G  N  L  V  F  *  R  S  L  V  Y  S  V  D  K  T  K  T  L  Y  C  V  C  V  I  V  C  Y  *  L  L  M  I  *  *  Q  Y  A  N  L  F  V  *  D  L  S  *  F  L  *  L  *  C  K  I  G  S  C  V  *  V  L  W  E  C  N  E  L  Y  I  D  V  M  L  *  F  Y  I  T  T  V  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29252" stop="29530"/>
                    <exon start="29750" stop="29836"/>
                    <exon start="30480" stop="30653"/>
                    <exon start="30733" stop="30870"/>
                    <exon start="31151" stop="31288"/>
                    <exon start="31398" stop="31459"/>
                    <exon start="31539" stop="31812"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1149</number_coding_nucleotides>
                  <number_encoded_amino_acids>383</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ITLNAFLSISAYISYSGWADKIHGLTAPADSLHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKPAEQTPLSALYVSKLFHEVGLPPGVLNVIPGSGSAGADLASHMDVDKIAFTGSTETGKAVVGAAAKSNLKPVTLELGGKSPFIICEDADVDKAVELAHSAVFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRIVGDPFKKGVEQGPQIDTEQFEKILKYIKSGTESGATLESGGEKLGSKGFYVQPTVFSNVQDNMLIARDEIFGPVQSLLKFKDVEEVIRRANSSHYGLAAGVFTQNIDAANTISRALRVGTVWVNCFNIFDAAIPFGGYKMSGHGREKGVYSLSNYLQVKAIVTPLKNPAWL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26475" stop="26514"/>
                    <exon start="28197" stop="28337"/>
                    <exon start="28417" stop="28610"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>372</number_coding_nucleotides>
                  <number_encoded_amino_acids>124</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSSKISVSNFENFFRYSNYWRKGIRRFCSSAVVHEEPITPPVEVKYNQLLINGQFVDAASGKTFPTFDPRTGEAITTVAEADTEDVNRAVFAARKAFDEGPWPKMTCAVTELSYLSISSSLSQQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="26427" e_stop="26514"/>
            <exon e_start="28197" e_stop="28337"/>
            <exon e_start="28417" e_stop="28559"/>
            <exon e_start="29007" e_stop="29530"/>
            <exon e_start="29750" e_stop="29836"/>
            <exon e_start="30480" e_stop="30653"/>
            <exon e_start="30733" e_stop="30870"/>
            <exon e_start="31151" e_stop="31288"/>
            <exon e_start="31398" e_stop="31459"/>
            <exon e_start="31539" e_stop="32103"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.901" e_score="0.977"/>
          <exon-intron don_prob="0.986" acc_prob="0.750" e_score="1.000"/>
          <exon-intron don_prob="0.793" acc_prob="0.922" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.933" acc_prob="0.857" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.920" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.977">
            <gDNA_exon_boundary e_start="26427" e_stop="26514" e_length="88"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.901">
            <gDNA_intron_boundary i_start="26515" i_stop="28196" i_length="1682"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="28197" e_stop="28337" e_length="141"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.750">
            <gDNA_intron_boundary i_start="28338" i_stop="28416" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="28417" e_stop="28559" e_length="143"/>
          </exon>
          <intron i_serial="3" don_prob="0.793" acc_prob="0.922">
            <gDNA_intron_boundary i_start="28560" i_stop="29006" i_length="447"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="29007" e_stop="29530" e_length="524"/>
          </exon>
          <intron i_serial="4" don_prob="0.959" acc_prob="0.980">
            <gDNA_intron_boundary i_start="29531" i_stop="29749" i_length="219"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="29750" e_stop="29836" e_length="87"/>
          </exon>
          <intron i_serial="5" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="29837" i_stop="30479" i_length="643"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="30480" e_stop="30653" e_length="174"/>
          </exon>
          <intron i_serial="6" don_prob="0.933" acc_prob="0.857">
            <gDNA_intron_boundary i_start="30654" i_stop="30732" i_length="79"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="30733" e_stop="30870" e_length="138"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.996">
            <gDNA_intron_boundary i_start="30871" i_stop="31150" i_length="280"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="31151" e_stop="31288" e_length="138"/>
          </exon>
          <intron i_serial="8" don_prob="0.961" acc_prob="0.997">
            <gDNA_intron_boundary i_start="31289" i_stop="31397" i_length="109"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="31398" e_stop="31459" e_length="62"/>
          </exon>
          <intron i_serial="9" don_prob="0.995" acc_prob="0.920">
            <gDNA_intron_boundary i_start="31460" i_stop="31538" i_length="79"/>
          </intron>
          <exon e_serial="10" e_score="0.998">
            <gDNA_exon_boundary e_start="31539" e_stop="32103" e_length="565"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26427" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28539"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217486" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26473" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28559"/>
              <exon start="29007" stop="29370"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371149" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26475" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28559"/>
              <exon start="29007" stop="29159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271849" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29025" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30624"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29025" stop="29530"/>
              <exon start="29750" stop="29799"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271439" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29063" stop="29530"/>
              <exon start="29750" stop="29776"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249362" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29075" stop="29530"/>
              <exon start="29750" stop="29785"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314892" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29075" stop="29476"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314995" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29176" stop="29466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257422" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29373" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249288" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29417" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30828"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275091" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29526" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="31693"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261730" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29776" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31411"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255543" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30511" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229381" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30539" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31206"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229740" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30782" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="32085"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542978" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30865" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31434"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264242" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31190" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="31872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264163" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31218" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="32103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355126" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31218" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="32103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349395" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31399" stop="31459"/>
              <exon start="31539" stop="32049"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31399" stop="31459"/>
              <exon start="31539" stop="31840"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281400" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31431" stop="31459"/>
              <exon start="31539" stop="31981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733861" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31540" stop="31956"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256282" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="5" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT : TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG : GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCA : GAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG : GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAG : ATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAG : GGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAG : ATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAG : GATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAA : GGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTTAGAGGTCACTTGTATACAGTGTAGATAAGACCAAAACGCTGTATTGTGTGTGTGTTATTGTTTGTTACTAACTTCTTATGATTTGATAACAATATGCAAACTTGTTTGTGTGAGACCTTTCTTGATTTCTGTAGCTCTGATGCAAAATAGGATCTTGTGTTTGAGTTTTGTGGGAATGTAATGAATTATATATAGATGTAATGTTATAATTCTATATTACTACGGTATATA</gDNA_template>
            <first_frame> F  *  M  L  S  L  Y  V  N  I  M  L  C  M  K  *  R  S  S  K  I  S  V  S  N  F  E  N  F   : F  R  Y  S  N  Y  W  R  K  G  I  R  R  F  C  S  S  A  V  V  H  E  E  P  I  T  P  P  V  E  V  K  Y  N  Q  L  L  I  N  G  Q  F  V  D  A  A  S   : G  K  T  F  P  T  F  D  P  R  T  G  E  A  I  T  T  V  A  E  A  D  T  E  D  V  N  R  A  V  F  A  A  R  K  A  F  D  E  G  P  W  P  K  M  T  C  A  :  E  R  S  C  I  M  L  Q  F  A  D  L  L  E  R  H  S  D  E  L  A  A  L  E  T  W  D  K  G  K  P  Y  E  Q  A  A  N  E  E  I  P  M  L  I  R  L  F  R  Y  Y  A  G  *  E  N  K  K  N  G  V  M  F  P  F  D  S  L  I  T  T  Y  C  I  S  I  D  V  L  M  F  A  E  S  P  *  M  L  F  *  V  F  L  L  T  F  L  I  Q  V  G  L  I  K  F  M  V  L  Q  L  L  L  T  V  C  T  M  F  R  P  C  M  S  Q  L  V  L  Q  D  R  *  Y  P  G  I  F  R  Y  *  C  S  P  G  K  L  A  L  H  L  L  V  V  T  L  S  Y  *  N  Q  Q  N  K  H  H  S  L  P  C  M  C  Q  S  Y  S  M  R :   L  D  F  P  L  E  S  *  M  S  F  L  D  P  V  V  Q  V  Q  I  L  P  V  I  W  M  S  I  R :   L  L  L  Q  G  P  Q  K  L  V  K  L  S  *  V  Q  L  Q  R  A  T  *  N  L  *  H  W  S  S  E  E  N  L  L  S  S  F  V  K  M  Q  T  L  I  K  L  L  S  W  L  I  L  L  F  S  L  T  R :   D  N  A  A  V  L  D  L  G  H  S  Y  M  K  E  Y  M  M  N  L  W  R  K  P  K  L  V  L  *  N  A  L  L  E  T  L  S  R  R  E  L  N  K  V  R  R :   L  I  Q  S  N  L  R  R  S  *  S  T  *  N  L  V  L  K  A  G  L  L  S  S  L  E  G  K  N  W  V  P  R  A  S  M  S  N  L  L  S  S  Q  M  S  R :   I  T  C  *  L  P  E  M  R  Y  L  D  Q  C  S  P  S  *  N  S   : R  M  L  K  R  S  S  E  G  Q  T  R  H  I  M  G  W  Q  R  V  F  L  P  R  I  *  M  Q  P  T  Q  Y  L  E  P  L  E  *  G  Q  C  G  L  T  A  L  T  S  L  M  L  P  F  R  L  V  V  I  R  *  V  D  M  E  E  R  R  E  S  T  A  *  V  T  T  C  K  S  K  L  L  L  P  L  *  R  I  Q  H  G  C  S  F  P  P  C  F  L  V  L  L  R  C  R  A  T  R  Q  S  C  L  L  E  V  T  C  I  Q  C  R  *  D  Q  N  A  V  L  C  V  C  Y  C  L  L  L  T  S  Y  D  L  I  T  I  C  K  L  V  C  V  R  P  F  L  I  S  V  A  L  M  Q  N  R  I  L  C  L  S  F  V  G  M  *  *  I  I  Y  R  C  N  V  I  I  L  Y  Y  Y  G  I   </first_frame>
            <second_frame>  F  E  C  S  L  F  M  *  T  L  C  F  V  *  N  K  G  P  L  R  F  L  *  A  T  L  K  I  S  :  L  G  T  P  T  T  G  E  R  V  S  E  G  F  V  A  V  P  W  C  M  K  S  Q  S  L  H  L  L  R  L  N  I  I  S  F  S  L  M  D  S  L  L  M  Q  P  Q  :  G  R  H  F  L  H  L  T  L  E  Q  A  K  L  L  L  R  L  R  R  P  T  L  K  M  S  T  V  Q  S  L  L  P  V  K  H  L  M  K  D  H  G  L  K  *  L  V  Q :   K  G  H  V  *  C  C  S  L  L  I  C  L  R  G  T  V  M  N  L  Q  H  L  R  L  G  I  R  E  S  L  T  N  K  L  Q  M  K  K  Y  Q  C  S  F  V  F  S  D  T  M  L  V  K  K  I  R  K  M  A  L  C  F  L  L  T  V  *  *  P  L  I  V  Y  Q  L  T  F  *  C  L  L  N  H  P  K  C  F  S  K  Y  F  C  L  H  F  L  F  R  L  G  *  *  N  S  W  S  Y  S  S  C  *  Q  F  A  P  C  S  D  P  A  *  A  N  W  C  C  R  T  D  N  T  L  E  F  S  V  I  N  V  R  L  E  S  W  P  C  T  C  L  W  *  H  C  R  T  K  T  S  R  T  N  T  T  L  C  P  V  C  V  K  V  I  P  *   : G  W  T  S  P  W  S  L  K  C  H  S  W  I  R  *  C  R  C  R  S  C  Q  S  Y  G  C  R  *   : D  C  F  Y  R  V  H  R  N  W  *  S  C  R  R  C  S  C  K  E  Q  P  K  T  C  D  I  G  A  R  R  K  I  S  F  H  H  L  *  R  C  R  R  *  *  S  C  *  V  G  S  F  C  C  F  L  *  P   : G  T  M  L  L  C  W  I  S  D  I  R  T  *  K  S  I  *  *  I  C  G  E  S  Q  S  S  C  F  K  T  H  C  W  R  P  F  Q  E  G  S  *  T  R  S  A   : D  *  Y  R  A  I  *  E  D  P  E  V  H  K  I  W  Y  *  K  R  G  Y  S  R  V  W  R  G  K  I  G  F  Q  G  L  L  C  P  T  Y  C  L  L  K  C  P   : G  *  H  A  D  C  Q  R  *  D  I  W  T  S  A  V  P  L  E  I  Q  :  G  C  *  R  G  H  P  K  G  K  L  V  T  L  W  V  G  S  G  C  F  Y  P  E  Y  R  C  S  Q  H  N  I  S  S  P  *  S  R  D  S  V  G  *  L  L  *  H  L  *  C  C  H  S  V  W  W  L  *  D  E  W  T  W  K  R  E  G  S  L  Q  P  K  *  L  L  A  S  Q  S  Y  C  Y  P  S  E  E  S  S  M  A  V  V  F  P  P  A  F  W  Y  S  *  D  V  V  Q  H  G  N  L  V  F  *  R  S  L  V  Y  S  V  D  K  T  K  T  L  Y  C  V  C  V  I  V  C  Y  *  L  L  M  I  *  *  Q  Y  A  N  L  F  V  *  D  L  S  *  F  L  *  L  *  C  K  I  G  S  C  V  *  V  L  W  E  C  N  E  L  Y  I  D  V  M  L  *  F  Y  I  T  T  V  Y  </second_frame>
            <third_frame>   L  N  A  L  S  L  C  K  H  Y  A  L  Y  E  I  K  V  L  *  D  F  C  K  Q  L  *  K  F  L :   *  V  L  Q  L  L  E  K  G  Y  Q  K  V  L  *  Q  C  R  G  A  *  R  A  N  H  S  T  C  *  G  *  I  *  S  A  S  H  *  W  T  V  C  *  C  S  L  R :   E  D  I  S  Y  I  *  P  S  N  R  R  S  Y  Y  Y  G  C  G  G  R  H  *  R  C  Q  P  C  S  L  C  C  P  *  S  I  *  *  R  T  M  A  *  N  D  L  C   : R  K  V  M  Y  N  V  A  V  C  *  F  A  *  E  A  Q  *  *  T  C  S  T  *  D  L  G  *  G  K  A  L  R  T  S  C  K  *  R  N  T  N  A  H  S  S  F  Q  I  L  C  W  L  R  K  *  E  K  W  R  Y  V  S  F  *  Q  F  N  N  H  L  L  Y  I  N  *  R  S  N  V  C  *  I  T  L  N  A  F  L  S  I  S  A  Y  I  S  Y  S  G  W  A  D  K  I  H  G  L  T  A  P  A  D  S  L  H  H  V  Q  T  L  H  E  P  I  G  V  A  G  Q  I  I  P  W  N  F  P  L  L  M  F  A  W  K  V  G  P  A  L  A  C  G  N  T  V  V  L  K  P  A  E  Q  T  P  L  S  A  L  Y  V  S  K  L  F  H  E  :  V  G  L  P  P  G  V  L  N  V  I  P  G  S  G  S  A  G  A  D  L  A  S  H  M  D  V  D  K  :  I  A  F  T  G  S  T  E  T  G  K  A  V  V  G  A  A  A  K  S  N  L  K  P  V  T  L  E  L  G  G  K  S  P  F  I  I  C  E  D  A  D  V  D  K  A  V  E  L  A  H  S  A  V  F  F  N  Q  :  G  Q  C  C  C  A  G  S  R  T  F  V  H  E  R  V  Y  D  E  F  V  E  K  A  K  A  R  A  L  K  R  I  V  G  D  P  F  K  K  G  V  E  Q  G  P  Q  :  I  D  T  E  Q  F  E  K  I  L  K  Y  I  K  S  G  T  E  S  G  A  T  L  E  S  G  G  E  K  L  G  S  K  G  F  Y  V  Q  P  T  V  F  S  N  V  Q  :  D  N  M  L  I  A  R  D  E  I  F  G  P  V  Q  S  L  L  K  F  K :   D  V  E  E  V  I  R  R  A  N  S  S  H  Y  G  L  A  A  G  V  F  T  Q  N  I  D  A  A  N  T  I  S  R  A  L  R  V  G  T  V  W  V  N  C  F  N  I  F  D  A  A  I  P  F  G  G  Y  K  M  S  G  H  G  R  E  K  G  V  Y  S  L  S  N  Y  L  Q  V  K  A  I  V  T  P  L  K  N  P  A  W  L  *  F  S  P  L  L  S  G  T  P  E  M  S  C  N  T  A  I  L  S  F  R  G  H  L  Y  T  V  *  I  R  P  K  R  C  I  V  C  V  L  L  F  V  T  N  F  L  *  F  D  N  N  M  Q  T  C  L  C  E  T  F  L  D  F  C  S  S  D  A  K  *  D  L  V  F  E  F  C  G  N  V  M  N  Y  I  *  M  *  C  Y  N  S  I  L  L  R  Y  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29252" stop="29530"/>
                    <exon start="29750" stop="29836"/>
                    <exon start="30480" stop="30653"/>
                    <exon start="30733" stop="30870"/>
                    <exon start="31151" stop="31288"/>
                    <exon start="31398" stop="31459"/>
                    <exon start="31539" stop="31812"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1149</number_coding_nucleotides>
                  <number_encoded_amino_acids>383</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ITLNAFLSISAYISYSGWADKIHGLTAPADSLHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKPAEQTPLSALYVSKLFHEVGLPPGVLNVIPGSGSAGADLASHMDVDKIAFTGSTETGKAVVGAAAKSNLKPVTLELGGKSPFIICEDADVDKAVELAHSAVFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRIVGDPFKKGVEQGPQIDTEQFEKILKYIKSGTESGATLESGGEKLGSKGFYVQPTVFSNVQDNMLIARDEIFGPVQSLLKFKDVEEVIRRANSSHYGLAAGVFTQNIDAANTISRALRVGTVWVNCFNIFDAAIPFGGYKMSGHGREKGVYSLSNYLQVKAIVTPLKNPAWL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="5" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26475" stop="26514"/>
                    <exon start="28197" stop="28337"/>
                    <exon start="28417" stop="28559"/>
                    <exon start="29007" stop="29165"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>480</number_coding_nucleotides>
                  <number_encoded_amino_acids>160</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSSKISVSNFENFFRYSNYWRKGIRRFCSSAVVHEEPITPPVEVKYNQLLINGQFVDAASGKTFPTFDPRTGEAITTVAEADTEDVNRAVFAARKAFDEGPWPKMTCAERSCIMLQFADLLERHSDELAALETWDKGKPYEQAANEEIPMLIRLFRYYAG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="26419" e_stop="26514"/>
            <exon e_start="28197" e_stop="28337"/>
            <exon e_start="28417" e_stop="28554"/>
            <exon e_start="29007" e_stop="29530"/>
            <exon e_start="29750" e_stop="29836"/>
            <exon e_start="30480" e_stop="30653"/>
            <exon e_start="30733" e_stop="30870"/>
            <exon e_start="31151" e_stop="31288"/>
            <exon e_start="31398" e_stop="31459"/>
            <exon e_start="31539" e_stop="32103"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.901" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.750" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.922" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.933" acc_prob="0.857" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.920" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="26419" e_stop="26514" e_length="96"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.901">
            <gDNA_intron_boundary i_start="26515" i_stop="28196" i_length="1682"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="28197" e_stop="28337" e_length="141"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.750">
            <gDNA_intron_boundary i_start="28338" i_stop="28416" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="28417" e_stop="28554" e_length="138"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.922">
            <gDNA_intron_boundary i_start="28555" i_stop="29006" i_length="452"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="29007" e_stop="29530" e_length="524"/>
          </exon>
          <intron i_serial="4" don_prob="0.959" acc_prob="0.980">
            <gDNA_intron_boundary i_start="29531" i_stop="29749" i_length="219"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="29750" e_stop="29836" e_length="87"/>
          </exon>
          <intron i_serial="5" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="29837" i_stop="30479" i_length="643"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="30480" e_stop="30653" e_length="174"/>
          </exon>
          <intron i_serial="6" don_prob="0.933" acc_prob="0.857">
            <gDNA_intron_boundary i_start="30654" i_stop="30732" i_length="79"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="30733" e_stop="30870" e_length="138"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.996">
            <gDNA_intron_boundary i_start="30871" i_stop="31150" i_length="280"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="31151" e_stop="31288" e_length="138"/>
          </exon>
          <intron i_serial="8" don_prob="0.961" acc_prob="0.997">
            <gDNA_intron_boundary i_start="31289" i_stop="31397" i_length="109"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="31398" e_stop="31459" e_length="62"/>
          </exon>
          <intron i_serial="9" don_prob="0.995" acc_prob="0.920">
            <gDNA_intron_boundary i_start="31460" i_stop="31538" i_length="79"/>
          </intron>
          <exon e_serial="10" e_score="0.998">
            <gDNA_exon_boundary e_start="31539" e_stop="32103" e_length="565"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26419" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28554"/>
              <exon start="29007" stop="29476"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727424" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26421" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28554"/>
              <exon start="29007" stop="29156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726097" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26427" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28539"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217486" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29025" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30624"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29025" stop="29530"/>
              <exon start="29750" stop="29799"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271439" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29063" stop="29530"/>
              <exon start="29750" stop="29776"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249362" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29075" stop="29530"/>
              <exon start="29750" stop="29785"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314892" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29075" stop="29476"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314995" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29176" stop="29466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257422" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29373" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249288" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29417" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30828"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275091" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29526" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="31693"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261730" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29776" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31411"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255543" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30511" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229381" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30539" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31206"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229740" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30782" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="32085"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542978" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30865" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31434"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264242" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31190" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="31872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264163" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31218" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="32103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355126" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31218" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="32103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349395" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31399" stop="31459"/>
              <exon start="31539" stop="32049"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31399" stop="31459"/>
              <exon start="31539" stop="31840"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281400" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31431" stop="31459"/>
              <exon start="31539" stop="31981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733861" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31540" stop="31956"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256282" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="6" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAGAACAATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT : TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG : GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTT : GAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG : GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAG : ATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAG : GGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAG : ATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAG : GATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAA : GGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTTAGAGGTCACTTGTATACAGTGTAGATAAGACCAAAACGCTGTATTGTGTGTGTGTTATTGTTTGTTACTAACTTCTTATGATTTGATAACAATATGCAAACTTGTTTGTGTGAGACCTTTCTTGATTTCTGTAGCTCTGATGCAAAATAGGATCTTGTGTTTGAGTTTTGTGGGAATGTAATGAATTATATATAGATGTAATGTTATAATTCTATATTACTACGGTATATA</gDNA_template>
            <first_frame> Q  N  N  F  E  C  S  L  F  M  *  T  L  C  F  V  *  N  K  G  P  L  R  F  L  *  A  T  L  K  I  S  :  L  G  T  P  T  T  G  E  R  V  S  E  G  F  V  A  V  P  W  C  M  K  S  Q  S  L  H  L  L  R  L  N  I  I  S  F  S  L  M  D  S  L  L  M  Q  P  Q  :  G  R  H  F  L  H  L  T  L  E  Q  A  K  L  L  L  R  L  R  R  P  T  L  K  M  S  T  V  Q  S  L  L  P  V  K  H  L  M  K  D  H  G  L  K  *  L  :  E  R  S  C  I  M  L  Q  F  A  D  L  L  E  R  H  S  D  E  L  A  A  L  E  T  W  D  K  G  K  P  Y  E  Q  A  A  N  E  E  I  P  M  L  I  R  L  F  R  Y  Y  A  G  *  E  N  K  K  N  G  V  M  F  P  F  D  S  L  I  T  T  Y  C  I  S  I  D  V  L  M  F  A  E  S  P  *  M  L  F  *  V  F  L  L  T  F  L  I  Q  V  G  L  I  K  F  M  V  L  Q  L  L  L  T  V  C  T  M  F  R  P  C  M  S  Q  L  V  L  Q  D  R  *  Y  P  G  I  F  R  Y  *  C  S  P  G  K  L  A  L  H  L  L  V  V  T  L  S  Y  *  N  Q  Q  N  K  H  H  S  L  P  C  M  C  Q  S  Y  S  M  R :   L  D  F  P  L  E  S  *  M  S  F  L  D  P  V  V  Q  V  Q  I  L  P  V  I  W  M  S  I  R :   L  L  L  Q  G  P  Q  K  L  V  K  L  S  *  V  Q  L  Q  R  A  T  *  N  L  *  H  W  S  S  E  E  N  L  L  S  S  F  V  K  M  Q  T  L  I  K  L  L  S  W  L  I  L  L  F  S  L  T  R :   D  N  A  A  V  L  D  L  G  H  S  Y  M  K  E  Y  M  M  N  L  W  R  K  P  K  L  V  L  *  N  A  L  L  E  T  L  S  R  R  E  L  N  K  V  R  R :   L  I  Q  S  N  L  R  R  S  *  S  T  *  N  L  V  L  K  A  G  L  L  S  S  L  E  G  K  N  W  V  P  R  A  S  M  S  N  L  L  S  S  Q  M  S  R :   I  T  C  *  L  P  E  M  R  Y  L  D  Q  C  S  P  S  *  N  S   : R  M  L  K  R  S  S  E  G  Q  T  R  H  I  M  G  W  Q  R  V  F  L  P  R  I  *  M  Q  P  T  Q  Y  L  E  P  L  E  *  G  Q  C  G  L  T  A  L  T  S  L  M  L  P  F  R  L  V  V  I  R  *  V  D  M  E  E  R  R  E  S  T  A  *  V  T  T  C  K  S  K  L  L  L  P  L  *  R  I  Q  H  G  C  S  F  P  P  C  F  L  V  L  L  R  C  R  A  T  R  Q  S  C  L  L  E  V  T  C  I  Q  C  R  *  D  Q  N  A  V  L  C  V  C  Y  C  L  L  L  T  S  Y  D  L  I  T  I  C  K  L  V  C  V  R  P  F  L  I  S  V  A  L  M  Q  N  R  I  L  C  L  S  F  V  G  M  *  *  I  I  Y  R  C  N  V  I  I  L  Y  Y  Y  G  I   </first_frame>
            <second_frame>  R  T  I  L  N  A  L  S  L  C  K  H  Y  A  L  Y  E  I  K  V  L  *  D  F  C  K  Q  L  *  K  F  L :   *  V  L  Q  L  L  E  K  G  Y  Q  K  V  L  *  Q  C  R  G  A  *  R  A  N  H  S  T  C  *  G  *  I  *  S  A  S  H  *  W  T  V  C  *  C  S  L  R :   E  D  I  S  Y  I  *  P  S  N  R  R  S  Y  Y  Y  G  C  G  G  R  H  *  R  C  Q  P  C  S  L  C  C  P  *  S  I  *  *  R  T  M  A  *  N  D  L :   K  G  H  V  *  C  C  S  L  L  I  C  L  R  G  T  V  M  N  L  Q  H  L  R  L  G  I  R  E  S  L  T  N  K  L  Q  M  K  K  Y  Q  C  S  F  V  F  S  D  T  M  L  V  K  K  I  R  K  M  A  L  C  F  L  L  T  V  *  *  P  L  I  V  Y  Q  L  T  F  *  C  L  L  N  H  P  K  C  F  S  K  Y  F  C  L  H  F  L  F  R  L  G  *  *  N  S  W  S  Y  S  S  C  *  Q  F  A  P  C  S  D  P  A  *  A  N  W  C  C  R  T  D  N  T  L  E  F  S  V  I  N  V  R  L  E  S  W  P  C  T  C  L  W  *  H  C  R  T  K  T  S  R  T  N  T  T  L  C  P  V  C  V  K  V  I  P  *   : G  W  T  S  P  W  S  L  K  C  H  S  W  I  R  *  C  R  C  R  S  C  Q  S  Y  G  C  R  *   : D  C  F  Y  R  V  H  R  N  W  *  S  C  R  R  C  S  C  K  E  Q  P  K  T  C  D  I  G  A  R  R  K  I  S  F  H  H  L  *  R  C  R  R  *  *  S  C  *  V  G  S  F  C  C  F  L  *  P   : G  T  M  L  L  C  W  I  S  D  I  R  T  *  K  S  I  *  *  I  C  G  E  S  Q  S  S  C  F  K  T  H  C  W  R  P  F  Q  E  G  S  *  T  R  S  A   : D  *  Y  R  A  I  *  E  D  P  E  V  H  K  I  W  Y  *  K  R  G  Y  S  R  V  W  R  G  K  I  G  F  Q  G  L  L  C  P  T  Y  C  L  L  K  C  P   : G  *  H  A  D  C  Q  R  *  D  I  W  T  S  A  V  P  L  E  I  Q  :  G  C  *  R  G  H  P  K  G  K  L  V  T  L  W  V  G  S  G  C  F  Y  P  E  Y  R  C  S  Q  H  N  I  S  S  P  *  S  R  D  S  V  G  *  L  L  *  H  L  *  C  C  H  S  V  W  W  L  *  D  E  W  T  W  K  R  E  G  S  L  Q  P  K  *  L  L  A  S  Q  S  Y  C  Y  P  S  E  E  S  S  M  A  V  V  F  P  P  A  F  W  Y  S  *  D  V  V  Q  H  G  N  L  V  F  *  R  S  L  V  Y  S  V  D  K  T  K  T  L  Y  C  V  C  V  I  V  C  Y  *  L  L  M  I  *  *  Q  Y  A  N  L  F  V  *  D  L  S  *  F  L  *  L  *  C  K  I  G  S  C  V  *  V  L  W  E  C  N  E  L  Y  I  D  V  M  L  *  F  Y  I  T  T  V  Y  </second_frame>
            <third_frame>   E  Q  F  *  M  L  S  L  Y  V  N  I  M  L  C  M  K  *  R  S  S  K  I  S  V  S  N  F  E  N  F   : F  R  Y  S  N  Y  W  R  K  G  I  R  R  F  C  S  S  A  V  V  H  E  E  P  I  T  P  P  V  E  V  K  Y  N  Q  L  L  I  N  G  Q  F  V  D  A  A  S   : G  K  T  F  P  T  F  D  P  R  T  G  E  A  I  T  T  V  A  E  A  D  T  E  D  V  N  R  A  V  F  A  A  R  K  A  F  D  E  G  P  W  P  K  M  T   : *  K  V  M  Y  N  V  A  V  C  *  F  A  *  E  A  Q  *  *  T  C  S  T  *  D  L  G  *  G  K  A  L  R  T  S  C  K  *  R  N  T  N  A  H  S  S  F  Q  I  L  C  W  L  R  K  *  E  K  W  R  Y  V  S  F  *  Q  F  N  N  H  L  L  Y  I  N  *  R  S  N  V  C  *  I  T  L  N  A  F  L  S  I  S  A  Y  I  S  Y  S  G  W  A  D  K  I  H  G  L  T  A  P  A  D  S  L  H  H  V  Q  T  L  H  E  P  I  G  V  A  G  Q  I  I  P  W  N  F  P  L  L  M  F  A  W  K  V  G  P  A  L  A  C  G  N  T  V  V  L  K  P  A  E  Q  T  P  L  S  A  L  Y  V  S  K  L  F  H  E  :  V  G  L  P  P  G  V  L  N  V  I  P  G  S  G  S  A  G  A  D  L  A  S  H  M  D  V  D  K  :  I  A  F  T  G  S  T  E  T  G  K  A  V  V  G  A  A  A  K  S  N  L  K  P  V  T  L  E  L  G  G  K  S  P  F  I  I  C  E  D  A  D  V  D  K  A  V  E  L  A  H  S  A  V  F  F  N  Q  :  G  Q  C  C  C  A  G  S  R  T  F  V  H  E  R  V  Y  D  E  F  V  E  K  A  K  A  R  A  L  K  R  I  V  G  D  P  F  K  K  G  V  E  Q  G  P  Q  :  I  D  T  E  Q  F  E  K  I  L  K  Y  I  K  S  G  T  E  S  G  A  T  L  E  S  G  G  E  K  L  G  S  K  G  F  Y  V  Q  P  T  V  F  S  N  V  Q  :  D  N  M  L  I  A  R  D  E  I  F  G  P  V  Q  S  L  L  K  F  K :   D  V  E  E  V  I  R  R  A  N  S  S  H  Y  G  L  A  A  G  V  F  T  Q  N  I  D  A  A  N  T  I  S  R  A  L  R  V  G  T  V  W  V  N  C  F  N  I  F  D  A  A  I  P  F  G  G  Y  K  M  S  G  H  G  R  E  K  G  V  Y  S  L  S  N  Y  L  Q  V  K  A  I  V  T  P  L  K  N  P  A  W  L  *  F  S  P  L  L  S  G  T  P  E  M  S  C  N  T  A  I  L  S  F  R  G  H  L  Y  T  V  *  I  R  P  K  R  C  I  V  C  V  L  L  F  V  T  N  F  L  *  F  D  N  N  M  Q  T  C  L  C  E  T  F  L  D  F  C  S  S  D  A  K  *  D  L  V  F  E  F  C  G  N  V  M  N  Y  I  *  M  *  C  Y  N  S  I  L  L  R  Y  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29252" stop="29530"/>
                    <exon start="29750" stop="29836"/>
                    <exon start="30480" stop="30653"/>
                    <exon start="30733" stop="30870"/>
                    <exon start="31151" stop="31288"/>
                    <exon start="31398" stop="31459"/>
                    <exon start="31539" stop="31812"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1149</number_coding_nucleotides>
                  <number_encoded_amino_acids>383</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ITLNAFLSISAYISYSGWADKIHGLTAPADSLHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKPAEQTPLSALYVSKLFHEVGLPPGVLNVIPGSGSAGADLASHMDVDKIAFTGSTETGKAVVGAAAKSNLKPVTLELGGKSPFIICEDADVDKAVELAHSAVFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRIVGDPFKKGVEQGPQIDTEQFEKILKYIKSGTESGATLESGGEKLGSKGFYVQPTVFSNVQDNMLIARDEIFGPVQSLLKFKDVEEVIRRANSSHYGLAAGVFTQNIDAANTISRALRVGTVWVNCFNIFDAAIPFGGYKMSGHGREKGVYSLSNYLQVKAIVTPLKNPAWL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="6" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26475" stop="26514"/>
                    <exon start="28197" stop="28337"/>
                    <exon start="28417" stop="28554"/>
                    <exon start="29007" stop="29008"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>318</number_coding_nucleotides>
                  <number_encoded_amino_acids>106</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSSKISVSNFENFFRYSNYWRKGIRRFCSSAVVHEEPITPPVEVKYNQLLINGQFVDAASGKTFPTFDPRTGEAITTVAEADTEDVNRAVFAARKAFDEGPWPKMT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="7">
          <exon_coordinates>
            <exon e_start="26427" e_stop="26514"/>
            <exon e_start="28197" e_stop="28337"/>
            <exon e_start="28417" e_stop="28559"/>
            <exon e_start="29007" e_stop="29160"/>
            <exon e_start="29301" e_stop="29530"/>
            <exon e_start="29750" e_stop="29836"/>
            <exon e_start="30480" e_stop="30653"/>
            <exon e_start="30733" e_stop="30870"/>
            <exon e_start="31151" e_stop="31288"/>
            <exon e_start="31398" e_stop="31459"/>
            <exon e_start="31539" e_stop="32103"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.901" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.750" e_score="1.000"/>
          <exon-intron don_prob="0.793" acc_prob="0.922" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.933" acc_prob="0.857" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.920" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="26427" e_stop="26514" e_length="88"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.901">
            <gDNA_intron_boundary i_start="26515" i_stop="28196" i_length="1682"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="28197" e_stop="28337" e_length="141"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.750">
            <gDNA_intron_boundary i_start="28338" i_stop="28416" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="28417" e_stop="28559" e_length="143"/>
          </exon>
          <intron i_serial="3" don_prob="0.793" acc_prob="0.922">
            <gDNA_intron_boundary i_start="28560" i_stop="29006" i_length="447"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="29007" e_stop="29160" e_length="154"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="29161" i_stop="29300" i_length="140"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="29301" e_stop="29530" e_length="230"/>
          </exon>
          <intron i_serial="5" don_prob="0.959" acc_prob="0.980">
            <gDNA_intron_boundary i_start="29531" i_stop="29749" i_length="219"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="29750" e_stop="29836" e_length="87"/>
          </exon>
          <intron i_serial="6" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="29837" i_stop="30479" i_length="643"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="30480" e_stop="30653" e_length="174"/>
          </exon>
          <intron i_serial="7" don_prob="0.933" acc_prob="0.857">
            <gDNA_intron_boundary i_start="30654" i_stop="30732" i_length="79"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="30733" e_stop="30870" e_length="138"/>
          </exon>
          <intron i_serial="8" don_prob="0.997" acc_prob="0.996">
            <gDNA_intron_boundary i_start="30871" i_stop="31150" i_length="280"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="31151" e_stop="31288" e_length="138"/>
          </exon>
          <intron i_serial="9" don_prob="0.961" acc_prob="0.997">
            <gDNA_intron_boundary i_start="31289" i_stop="31397" i_length="109"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="31398" e_stop="31459" e_length="62"/>
          </exon>
          <intron i_serial="10" don_prob="0.995" acc_prob="0.920">
            <gDNA_intron_boundary i_start="31460" i_stop="31538" i_length="79"/>
          </intron>
          <exon e_serial="11" e_score="0.998">
            <gDNA_exon_boundary e_start="31539" e_stop="32103" e_length="565"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26427" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28539"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217486" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26452" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28559"/>
              <exon start="29007" stop="29160"/>
              <exon start="29301" stop="29530"/>
              <exon start="29750" stop="29831"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542979" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26453" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28559"/>
              <exon start="29007" stop="29160"/>
              <exon start="29301" stop="29369"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302394" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26475" stop="26514"/>
              <exon start="28197" stop="28337"/>
              <exon start="28417" stop="28559"/>
              <exon start="29007" stop="29159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271849" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29373" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249288" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29417" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30828"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275091" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29526" stop="29530"/>
              <exon start="29750" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="31693"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261730" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29776" stop="29836"/>
              <exon start="30480" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31411"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255543" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30511" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229381" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30539" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31206"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229740" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30782" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="32085"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542978" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30865" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31434"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264242" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31190" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="31872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264163" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31218" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="32103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355126" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31218" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="32103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349395" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31399" stop="31459"/>
              <exon start="31539" stop="32049"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31399" stop="31459"/>
              <exon start="31539" stop="31840"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281400" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31431" stop="31459"/>
              <exon start="31539" stop="31981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733861" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31540" stop="31956"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256282" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="7" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT : TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG : GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCA : GAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTG : GTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG : GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAG : ATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAG : GGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAG : ATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAG : GATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAA : GGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTTAGAGGTCACTTGTATACAGTGTAGATAAGACCAAAACGCTGTATTGTGTGTGTGTTATTGTTTGTTACTAACTTCTTATGATTTGATAACAATATGCAAACTTGTTTGTGTGAGACCTTTCTTGATTTCTGTAGCTCTGATGCAAAATAGGATCTTGTGTTTGAGTTTTGTGGGAATGTAATGAATTATATATAGATGTAATGTTATAATTCTATATTACTACGGTATATA</gDNA_template>
            <first_frame> F  *  M  L  S  L  Y  V  N  I  M  L  C  M  K  *  R  S  S  K  I  S  V  S  N  F  E  N  F   : F  R  Y  S  N  Y  W  R  K  G  I  R  R  F  C  S  S  A  V  V  H  E  E  P  I  T  P  P  V  E  V  K  Y  N  Q  L  L  I  N  G  Q  F  V  D  A  A  S   : G  K  T  F  P  T  F  D  P  R  T  G  E  A  I  T  T  V  A  E  A  D  T  E  D  V  N  R  A  V  F  A  A  R  K  A  F  D  E  G  P  W  P  K  M  T  C  A  :  E  R  S  C  I  M  L  Q  F  A  D  L  L  E  R  H  S  D  E  L  A  A  L  E  T  W  D  K  G  K  P  Y  E  Q  A  A  N  E  E  I  P  M  L  I  R  L  F  R  Y  Y  A   : G  W  A  D  K  I  H  G  L  T  A  P  A  D  S  L  H  H  V  Q  T  L  H  E  P  I  G  V  A  G  Q  I  I  P  W  N  F  P  L  L  M  F  A  W  K  V  G  P  A  L  A  C  G  N  T  V  V  L  K  P  A  E  Q  T  P  L  S  A  L  Y  V  S  K  L  F  H  E  :  V  G  L  P  P  G  V  L  N  V  I  P  G  S  G  S  A  G  A  D  L  A  S  H  M  D  V  D  K  :  I  A  F  T  G  S  T  E  T  G  K  A  V  V  G  A  A  A  K  S  N  L  K  P  V  T  L  E  L  G  G  K  S  P  F  I  I  C  E  D  A  D  V  D  K  A  V  E  L  A  H  S  A  V  F  F  N  Q  :  G  Q  C  C  C  A  G  S  R  T  F  V  H  E  R  V  Y  D  E  F  V  E  K  A  K  A  R  A  L  K  R  I  V  G  D  P  F  K  K  G  V  E  Q  G  P  Q  :  I  D  T  E  Q  F  E  K  I  L  K  Y  I  K  S  G  T  E  S  G  A  T  L  E  S  G  G  E  K  L  G  S  K  G  F  Y  V  Q  P  T  V  F  S  N  V  Q  :  D  N  M  L  I  A  R  D  E  I  F  G  P  V  Q  S  L  L  K  F  K :   D  V  E  E  V  I  R  R  A  N  S  S  H  Y  G  L  A  A  G  V  F  T  Q  N  I  D  A  A  N  T  I  S  R  A  L  R  V  G  T  V  W  V  N  C  F  N  I  F  D  A  A  I  P  F  G  G  Y  K  M  S  G  H  G  R  E  K  G  V  Y  S  L  S  N  Y  L  Q  V  K  A  I  V  T  P  L  K  N  P  A  W  L  *  F  S  P  L  L  S  G  T  P  E  M  S  C  N  T  A  I  L  S  F  R  G  H  L  Y  T  V  *  I  R  P  K  R  C  I  V  C  V  L  L  F  V  T  N  F  L  *  F  D  N  N  M  Q  T  C  L  C  E  T  F  L  D  F  C  S  S  D  A  K  *  D  L  V  F  E  F  C  G  N  V  M  N  Y  I  *  M  *  C  Y  N  S  I  L  L  R  Y  I </first_frame>
            <second_frame>  F  E  C  S  L  F  M  *  T  L  C  F  V  *  N  K  G  P  L  R  F  L  *  A  T  L  K  I  S  :  L  G  T  P  T  T  G  E  R  V  S  E  G  F  V  A  V  P  W  C  M  K  S  Q  S  L  H  L  L  R  L  N  I  I  S  F  S  L  M  D  S  L  L  M  Q  P  Q  :  G  R  H  F  L  H  L  T  L  E  Q  A  K  L  L  L  R  L  R  R  P  T  L  K  M  S  T  V  Q  S  L  L  P  V  K  H  L  M  K  D  H  G  L  K  *  L  V  Q :   K  G  H  V  *  C  C  S  L  L  I  C  L  R  G  T  V  M  N  L  Q  H  L  R  L  G  I  R  E  S  L  T  N  K  L  Q  M  K  K  Y  Q  C  S  F  V  F  S  D  T  M  L  :  V  G  L  I  K  F  M  V  L  Q  L  L  L  T  V  C  T  M  F  R  P  C  M  S  Q  L  V  L  Q  D  R  *  Y  P  G  I  F  R  Y  *  C  S  P  G  K  L  A  L  H  L  L  V  V  T  L  S  Y  *  N  Q  Q  N  K  H  H  S  L  P  C  M  C  Q  S  Y  S  M  R :   L  D  F  P  L  E  S  *  M  S  F  L  D  P  V  V  Q  V  Q  I  L  P  V  I  W  M  S  I  R :   L  L  L  Q  G  P  Q  K  L  V  K  L  S  *  V  Q  L  Q  R  A  T  *  N  L  *  H  W  S  S  E  E  N  L  L  S  S  F  V  K  M  Q  T  L  I  K  L  L  S  W  L  I  L  L  F  S  L  T  R :   D  N  A  A  V  L  D  L  G  H  S  Y  M  K  E  Y  M  M  N  L  W  R  K  P  K  L  V  L  *  N  A  L  L  E  T  L  S  R  R  E  L  N  K  V  R  R :   L  I  Q  S  N  L  R  R  S  *  S  T  *  N  L  V  L  K  A  G  L  L  S  S  L  E  G  K  N  W  V  P  R  A  S  M  S  N  L  L  S  S  Q  M  S  R :   I  T  C  *  L  P  E  M  R  Y  L  D  Q  C  S  P  S  *  N  S   : R  M  L  K  R  S  S  E  G  Q  T  R  H  I  M  G  W  Q  R  V  F  L  P  R  I  *  M  Q  P  T  Q  Y  L  E  P  L  E  *  G  Q  C  G  L  T  A  L  T  S  L  M  L  P  F  R  L  V  V  I  R  *  V  D  M  E  E  R  R  E  S  T  A  *  V  T  T  C  K  S  K  L  L  L  P  L  *  R  I  Q  H  G  C  S  F  P  P  C  F  L  V  L  L  R  C  R  A  T  R  Q  S  C  L  L  E  V  T  C  I  Q  C  R  *  D  Q  N  A  V  L  C  V  C  Y  C  L  L  L  T  S  Y  D  L  I  T  I  C  K  L  V  C  V  R  P  F  L  I  S  V  A  L  M  Q  N  R  I  L  C  L  S  F  V  G  M  *  *  I  I  Y  R  C  N  V  I  I  L  Y  Y  Y  G  I   </second_frame>
            <third_frame>   L  N  A  L  S  L  C  K  H  Y  A  L  Y  E  I  K  V  L  *  D  F  C  K  Q  L  *  K  F  L :   *  V  L  Q  L  L  E  K  G  Y  Q  K  V  L  *  Q  C  R  G  A  *  R  A  N  H  S  T  C  *  G  *  I  *  S  A  S  H  *  W  T  V  C  *  C  S  L  R :   E  D  I  S  Y  I  *  P  S  N  R  R  S  Y  Y  Y  G  C  G  G  R  H  *  R  C  Q  P  C  S  L  C  C  P  *  S  I  *  *  R  T  M  A  *  N  D  L  C   : R  K  V  M  Y  N  V  A  V  C  *  F  A  *  E  A  Q  *  *  T  C  S  T  *  D  L  G  *  G  K  A  L  R  T  S  C  K  *  R  N  T  N  A  H  S  S  F  Q  I  L  C  W :   L  G  *  *  N  S  W  S  Y  S  S  C  *  Q  F  A  P  C  S  D  P  A  *  A  N  W  C  C  R  T  D  N  T  L  E  F  S  V  I  N  V  R  L  E  S  W  P  C  T  C  L  W  *  H  C  R  T  K  T  S  R  T  N  T  T  L  C  P  V  C  V  K  V  I  P  *   : G  W  T  S  P  W  S  L  K  C  H  S  W  I  R  *  C  R  C  R  S  C  Q  S  Y  G  C  R  *   : D  C  F  Y  R  V  H  R  N  W  *  S  C  R  R  C  S  C  K  E  Q  P  K  T  C  D  I  G  A  R  R  K  I  S  F  H  H  L  *  R  C  R  R  *  *  S  C  *  V  G  S  F  C  C  F  L  *  P   : G  T  M  L  L  C  W  I  S  D  I  R  T  *  K  S  I  *  *  I  C  G  E  S  Q  S  S  C  F  K  T  H  C  W  R  P  F  Q  E  G  S  *  T  R  S  A   : D  *  Y  R  A  I  *  E  D  P  E  V  H  K  I  W  Y  *  K  R  G  Y  S  R  V  W  R  G  K  I  G  F  Q  G  L  L  C  P  T  Y  C  L  L  K  C  P   : G  *  H  A  D  C  Q  R  *  D  I  W  T  S  A  V  P  L  E  I  Q  :  G  C  *  R  G  H  P  K  G  K  L  V  T  L  W  V  G  S  G  C  F  Y  P  E  Y  R  C  S  Q  H  N  I  S  S  P  *  S  R  D  S  V  G  *  L  L  *  H  L  *  C  C  H  S  V  W  W  L  *  D  E  W  T  W  K  R  E  G  S  L  Q  P  K  *  L  L  A  S  Q  S  Y  C  Y  P  S  E  E  S  S  M  A  V  V  F  P  P  A  F  W  Y  S  *  D  V  V  Q  H  G  N  L  V  F  *  R  S  L  V  Y  S  V  D  K  T  K  T  L  Y  C  V  C  V  I  V  C  Y  *  L  L  M  I  *  *  Q  Y  A  N  L  F  V  *  D  L  S  *  F  L  *  L  *  C  K  I  G  S  C  V  *  V  L  W  E  C  N  E  L  Y  I  D  V  M  L  *  F  Y  I  T  T  V  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="7" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26475" stop="26514"/>
                    <exon start="28197" stop="28337"/>
                    <exon start="28417" stop="28559"/>
                    <exon start="29007" stop="29160"/>
                    <exon start="29301" stop="29530"/>
                    <exon start="29750" stop="29836"/>
                    <exon start="30480" stop="30653"/>
                    <exon start="30733" stop="30870"/>
                    <exon start="31151" stop="31288"/>
                    <exon start="31398" stop="31459"/>
                    <exon start="31539" stop="31812"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1578</number_coding_nucleotides>
                  <number_encoded_amino_acids>526</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSSKISVSNFENFFRYSNYWRKGIRRFCSSAVVHEEPITPPVEVKYNQLLINGQFVDAASGKTFPTFDPRTGEAITTVAEADTEDVNRAVFAARKAFDEGPWPKMTCAERSCIMLQFADLLERHSDELAALETWDKGKPYEQAANEEIPMLIRLFRYYAGWADKIHGLTAPADSLHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKPAEQTPLSALYVSKLFHEVGLPPGVLNVIPGSGSAGADLASHMDVDKIAFTGSTETGKAVVGAAAKSNLKPVTLELGGKSPFIICEDADVDKAVELAHSAVFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRIVGDPFKKGVEQGPQIDTEQFEKILKYIKSGTESGATLESGGEKLGSKGFYVQPTVFSNVQDNMLIARDEIFGPVQSLLKFKDVEEVIRRANSSHYGLAAGVFTQNIDAANTISRALRVGTVWVNCFNIFDAAIPFGGYKMSGHGREKGVYSLSNYLQVKAIVTPLKNPAWL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="8">
          <exon_coordinates>
            <exon e_start="29926" e_stop="30653"/>
            <exon e_start="30733" e_stop="30870"/>
            <exon e_start="31151" e_stop="31288"/>
            <exon e_start="31398" e_stop="31459"/>
            <exon e_start="31539" e_stop="32103"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.933" acc_prob="0.857" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.920" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="29926" e_stop="30653" e_length="728"/>
          </exon>
          <intron i_serial="1" don_prob="0.933" acc_prob="0.857">
            <gDNA_intron_boundary i_start="30654" i_stop="30732" i_length="79"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="30733" e_stop="30870" e_length="138"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.996">
            <gDNA_intron_boundary i_start="30871" i_stop="31150" i_length="280"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="31151" e_stop="31288" e_length="138"/>
          </exon>
          <intron i_serial="3" don_prob="0.961" acc_prob="0.997">
            <gDNA_intron_boundary i_start="31289" i_stop="31397" i_length="109"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="31398" e_stop="31459" e_length="62"/>
          </exon>
          <intron i_serial="4" don_prob="0.995" acc_prob="0.920">
            <gDNA_intron_boundary i_start="31460" i_stop="31538" i_length="79"/>
          </intron>
          <exon e_serial="5" e_score="0.998">
            <gDNA_exon_boundary e_start="31539" e_stop="32103" e_length="565"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29926" stop="30591"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211596" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29943" stop="30517"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550826" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29943" stop="30517"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688547" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30368" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246306" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30473" stop="30653"/>
              <exon start="30733" stop="30846"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338365" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30511" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229381" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30539" stop="30653"/>
              <exon start="30733" stop="30870"/>
              <exon start="31151" stop="31206"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229740" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30782" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="32085"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542978" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30865" stop="30870"/>
              <exon start="31151" stop="31288"/>
              <exon start="31398" stop="31434"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264242" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31190" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="31872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264163" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31218" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="32103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355126" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31218" stop="31288"/>
              <exon start="31398" stop="31459"/>
              <exon start="31539" stop="32103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349395" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31399" stop="31459"/>
              <exon start="31539" stop="32049"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31399" stop="31459"/>
              <exon start="31539" stop="31840"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281400" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31431" stop="31459"/>
              <exon start="31539" stop="31981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733861" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31540" stop="31956"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256282" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="8" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCAAGGCAGTTTCAGTATCAAATTTGAAATGTTGGATTGTATAAAGGAGTGTCAGAACACGGTATTTCAGTTTCAACATATCTCTAGGTAGCAATGAAGCTATCCGTCGCTAATTCTACCCCCTCTTCCATCCCAAAGAAGATTAAAAGAAGTAAATAGCCTAATTATAGTGTCTCATTAGATAGTATAATCCACATGTAGAAAATGAAGAAAATCATATCTTTTTCTTCCAGCTTCCCCATTAAAAGTCAATAAACAACATAAAGAGGTTATGCATCCTGATGTCCTTTCAGCTTTTGTATTTCATGCTTGCTTTTATTGATGCAGCTGTGATGTGTAAAGTTTTCTGAGTGAATACTCTGGAATAGATGAGGGAGACTGAAGGAGCACTGACATCTTCTACTACTTGTTTTCGTATAGATTTAAACAGCTTGGTCCTCGACATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAG : GGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAG : ATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAG : GATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAA : GGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTTAGAGGTCACTTGTATACAGTGTAGATAAGACCAAAACGCTGTATTGTGTGTGTGTTATTGTTTGTTACTAACTTCTTATGATTTGATAACAATATGCAAACTTGTTTGTGTGAGACCTTTCTTGATTTCTGTAGCTCTGATGCAAAATAGGATCTTGTGTTTGAGTTTTGTGGGAATGTAATGAATTATATATAGATGTAATGTTATAATTCTATATTACTACGGTATATA</gDNA_template>
            <first_frame> P  R  Q  F  Q  Y  Q  I  *  N  V  G  L  Y  K  G  V  S  E  H  G  I  S  V  S  T  Y  L  *  V  A  M  K  L  S  V  A  N  S  T  P  S  S  I  P  K  K  I  K  R  S  K  *  P  N  Y  S  V  S  L  D  S  I  I  H  M  *  K  M  K  K  I  I  S  F  S  S  S  F  P  I  K  S  Q  *  T  T  *  R  G  Y  A  S  *  C  P  F  S  F  C  I  S  C  L  L  L  L  M  Q  L  *  C  V  K  F  S  E  *  I  L  W  N  R  *  G  R  L  K  E  H  *  H  L  L  L  L  V  F  V  *  I  *  T  A  W  S  S  T  L  L  A  S  F  P  P  V  K  C  F  F  L  V  I  F  *  F  F  C  D  V  *  I  A  M  C  L  Y  I  T  P  F  G  V  Y  R  L  L  L  Q  G  P  Q  K  L  V  K  L  S  *  V  Q  L  Q  R  A  T  *  N  L  *  H  W  S  S  E  E  N  L  L  S  S  F  V  K  M  Q  T  L  I  K  L  L  S  W  L  I  L  L  F  S  L  T  R :   D  N  A  A  V  L  D  L  G  H  S  Y  M  K  E  Y  M  M  N  L  W  R  K  P  K  L  V  L  *  N  A  L  L  E  T  L  S  R  R  E  L  N  K  V  R  R :   L  I  Q  S  N  L  R  R  S  *  S  T  *  N  L  V  L  K  A  G  L  L  S  S  L  E  G  K  N  W  V  P  R  A  S  M  S  N  L  L  S  S  Q  M  S  R :   I  T  C  *  L  P  E  M  R  Y  L  D  Q  C  S  P  S  *  N  S   : R  M  L  K  R  S  S  E  G  Q  T  R  H  I  M  G  W  Q  R  V  F  L  P  R  I  *  M  Q  P  T  Q  Y  L  E  P  L  E  *  G  Q  C  G  L  T  A  L  T  S  L  M  L  P  F  R  L  V  V  I  R  *  V  D  M  E  E  R  R  E  S  T  A  *  V  T  T  C  K  S  K  L  L  L  P  L  *  R  I  Q  H  G  C  S  F  P  P  C  F  L  V  L  L  R  C  R  A  T  R  Q  S  C  L  L  E  V  T  C  I  Q  C  R  *  D  Q  N  A  V  L  C  V  C  Y  C  L  L  L  T  S  Y  D  L  I  T  I  C  K  L  V  C  V  R  P  F  L  I  S  V  A  L  M  Q  N  R  I  L  C  L  S  F  V  G  M  *  *  I  I  Y  R  C  N  V  I  I  L  Y  Y  Y  G  I   </first_frame>
            <second_frame>  Q  G  S  F  S  I  K  F  E  M  L  D  C  I  K  E  C  Q  N  T  V  F  Q  F  Q  H  I  S  R  *  Q  *  S  Y  P  S  L  I  L  P  P  L  P  S  Q  R  R  L  K  E  V  N  S  L  I  I  V  S  H  *  I  V  *  S  T  C  R  K  *  R  K  S  Y  L  F  L  P  A  S  P  L  K  V  N  K  Q  H  K  E  V  M  H  P  D  V  L  S  A  F  V  F  H  A  C  F  Y  *  C  S  C  D  V  *  S  F  L  S  E  Y  S  G  I  D  E  G  D  *  R  S  T  D  I  F  Y  Y  L  F  S  Y  R  F  K  Q  L  G  P  R  H  Y  L  H  L  F  P  L  *  N  V  F  F  W  *  F  F  N  F  S  V  M  S  K  L  R  C  V  S  T  S  L  L  L  V  S  T  D  C  F  Y  R  V  H  R  N  W  *  S  C  R  R  C  S  C  K  E  Q  P  K  T  C  D  I  G  A  R  R  K  I  S  F  H  H  L  *  R  C  R  R  *  *  S  C  *  V  G  S  F  C  C  F  L  *  P   : G  T  M  L  L  C  W  I  S  D  I  R  T  *  K  S  I  *  *  I  C  G  E  S  Q  S  S  C  F  K  T  H  C  W  R  P  F  Q  E  G  S  *  T  R  S  A   : D  *  Y  R  A  I  *  E  D  P  E  V  H  K  I  W  Y  *  K  R  G  Y  S  R  V  W  R  G  K  I  G  F  Q  G  L  L  C  P  T  Y  C  L  L  K  C  P   : G  *  H  A  D  C  Q  R  *  D  I  W  T  S  A  V  P  L  E  I  Q  :  G  C  *  R  G  H  P  K  G  K  L  V  T  L  W  V  G  S  G  C  F  Y  P  E  Y  R  C  S  Q  H  N  I  S  S  P  *  S  R  D  S  V  G  *  L  L  *  H  L  *  C  C  H  S  V  W  W  L  *  D  E  W  T  W  K  R  E  G  S  L  Q  P  K  *  L  L  A  S  Q  S  Y  C  Y  P  S  E  E  S  S  M  A  V  V  F  P  P  A  F  W  Y  S  *  D  V  V  Q  H  G  N  L  V  F  *  R  S  L  V  Y  S  V  D  K  T  K  T  L  Y  C  V  C  V  I  V  C  Y  *  L  L  M  I  *  *  Q  Y  A  N  L  F  V  *  D  L  S  *  F  L  *  L  *  C  K  I  G  S  C  V  *  V  L  W  E  C  N  E  L  Y  I  D  V  M  L  *  F  Y  I  T  T  V  Y  </second_frame>
            <third_frame>   K  A  V  S  V  S  N  L  K  C  W  I  V  *  R  S  V  R  T  R  Y  F  S  F  N  I  S  L  G  S  N  E  A  I  R  R  *  F  Y  P  L  F  H  P  K  E  D  *  K  K  *  I  A  *  L  *  C  L  I  R  *  Y  N  P  H  V  E  N  E  E  N  H  I  F  F  F  Q  L  P  H  *  K  S  I  N  N  I  K  R  L  C  I  L  M  S  F  Q  L  L  Y  F  M  L  A  F  I  D  A  A  V  M  C  K  V  F  *  V  N  T  L  E  *  M  R  E  T  E  G  A  L  T  S  S  T  T  C  F  R  I  D  L  N  S  L  V  L  D  I  T  C  I  F  S  P  C  K  M  F  F  F  G  D  F  L  I  F  L  *  C  L  N  C  D  V  S  L  H  H  S  F  W  C  L  Q  I  A  F  T  G  S  T  E  T  G  K  A  V  V  G  A  A  A  K  S  N  L  K  P  V  T  L  E  L  G  G  K  S  P  F  I  I  C  E  D  A  D  V  D  K  A  V  E  L  A  H  S  A  V  F  F  N  Q  :  G  Q  C  C  C  A  G  S  R  T  F  V  H  E  R  V  Y  D  E  F  V  E  K  A  K  A  R  A  L  K  R  I  V  G  D  P  F  K  K  G  V  E  Q  G  P  Q  :  I  D  T  E  Q  F  E  K  I  L  K  Y  I  K  S  G  T  E  S  G  A  T  L  E  S  G  G  E  K  L  G  S  K  G  F  Y  V  Q  P  T  V  F  S  N  V  Q  :  D  N  M  L  I  A  R  D  E  I  F  G  P  V  Q  S  L  L  K  F  K :   D  V  E  E  V  I  R  R  A  N  S  S  H  Y  G  L  A  A  G  V  F  T  Q  N  I  D  A  A  N  T  I  S  R  A  L  R  V  G  T  V  W  V  N  C  F  N  I  F  D  A  A  I  P  F  G  G  Y  K  M  S  G  H  G  R  E  K  G  V  Y  S  L  S  N  Y  L  Q  V  K  A  I  V  T  P  L  K  N  P  A  W  L  *  F  S  P  L  L  S  G  T  P  E  M  S  C  N  T  A  I  L  S  F  R  G  H  L  Y  T  V  *  I  R  P  K  R  C  I  V  C  V  L  L  F  V  T  N  F  L  *  F  D  N  N  M  Q  T  C  L  C  E  T  F  L  D  F  C  S  S  D  A  K  *  D  L  V  F  E  F  C  G  N  V  M  N  Y  I  *  M  *  C  Y  N  S  I  L  L  R  Y  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="8" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30432" stop="30653"/>
                    <exon start="30733" stop="30870"/>
                    <exon start="31151" stop="31288"/>
                    <exon start="31398" stop="31459"/>
                    <exon start="31539" stop="31812"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>831</number_coding_nucleotides>
                  <number_encoded_amino_acids>277</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CLNCDVSLHHSFWCLQIAFTGSTETGKAVVGAAAKSNLKPVTLELGGKSPFIICEDADVDKAVELAHSAVFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRIVGDPFKKGVEQGPQIDTEQFEKILKYIKSGTESGATLESGGEKLGSKGFYVQPTVFSNVQDNMLIARDEIFGPVQSLLKFKDVEEVIRRANSSHYGLAAGVFTQNIDAANTISRALRVGTVWVNCFNIFDAAIPFGGYKMSGHGREKGVYSLSNYLQVKAIVTPLKNPAWL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="9">
          <exon_coordinates>
            <exon e_start="27007" e_stop="27733"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="27007" e_stop="27733" e_length="727"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27007" stop="27733"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333396" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="9" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTAT</gDNA_template>
            <first_frame> N  F  F  P  *  V  D  F  Q  E  N  G  N  N  F  A  R  I  G  S  N  *  Q  L  I  V  L  P  K  S  K  K  S  K  T  N  P  Y  N  G  S  V  A  A  A  R  L  L  Q  W  F  P  G  E  G  E  I  T  L  P  T  S  D  P  T  N  K  *  T  I  F  P  V  I  V  L  P  R  S  K  K  A  N  T  N  P  S  G  R  G  S  G  A  S  S  S  M  S  S  K  K  R  E  N  N  F  A  F  S  H  L  L  Q  F  P  *  F  C  I  F  L  E  S  N  S  T  V  P  L  W  T  S  S  L  L  T  K  H  K  S  N  *  E  E  I  K  L  N  K  M  N  S  V  P  E  E  N  L  N  T  *  V  D  I  K  K  N  Q  L  S  S  *  I  K  Y  H  I  I  N  S  R  S  C  R  L  N  R  H  E  P  N  H  K  S  R  D  K  F  P  L  L  K  E  S  A  Q  I  H  Y  I  L  V  L  Q  F  Q  L  H  L  P  R  N  C  R  K  Y  S  N  L  V  T  F  E  E  D  G  K  I  D  S  F  L  </first_frame>
            <second_frame>  T  F  F  H  E  L  I  S  K  K  M  E  I  T  L  P  A  L  D  L  T  N  N  L  L  F  Y  P  S  P  R  N  Q  K  Q  T  H  I  M  V  A  W  R  R  R  V  F  F  N  G  F  Q  E  K  G  K  *  L  Y  P  H  P  T  Q  L  T  S  K  P  S  F  P  L  *  F  Y  P  G  P  R  R  Q  I  Q  T  P  L  G  V  A  A  A  H  L  L  P  C  L  P  R  K  G  K  I  T  L  P  F  P  I  F  Y  S  S  L  N  F  A  F  F  *  N  L  T  Q  Q  S  L  Y  G  L  H  H  F  *  P  N  T  N  P  T  K  K  R  *  N  S  I  K  *  I  A  S  Q  R  K  I  S  T  P  E  *  T  *  K  R  I  N  L  A  V  K  *  N  I  T  S  S  T  A  E  V  A  A  *  I  A  T  N  P  T  T  K  A  E  T  N  F  P  C  *  K  N  Q  P  K  S  T  T  F  L  Y  C  N  S  N  Y  T  C  L  E  I  A  A  N  T  V  T  W  *  L  L  R  K  M  E  K  L  I  L  F  Y </second_frame>
            <third_frame>   L  F  S  M  S  *  F  P  R  K  W  K  *  L  C  P  H  W  I  *  L  T  T  Y  C  S  T  Q  V  Q  E  I  K  N  K  P  I  *  W  *  R  G  G  G  A  S  S  S  M  V  S  R  R  R  G  N  N  F  T  H  I  R  P  N  *  Q  V  N  H  L  S  R  Y  S  S  T  Q  V  Q  E  G  K  Y  K  P  L  W  A  W  Q  R  R  I  F  F  H  V  F  Q  E  K  G  K  *  L  C  L  F  P  S  S  T  V  P  L  I  L  H  F  F  R  I  *  L  N  S  P  F  M  D  F  I  T  S  N  Q  T  Q  I  Q  L  R  R  D  K  T  Q  *  N  E  *  R  P  R  G  K  S  Q  H  L  S  R  H  K  K  E  S  T  *  Q  L  N  K  I  S  H  H  Q  Q  Q  K  L  P  P  E  S  P  R  T  Q  P  Q  K  Q  R  Q  I  S  L  A  E  R  I  S  P  N  P  L  H  S  C  T  A  I  P  I  T  L  A  S  K  L  P  Q  I  Q  *  L  G  D  F  *  G  R  W  K  N  *  F  F  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="9" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="27523" stop="27732"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKYHIINSRSCRLNRHEPNHKSRDKFPLLKESAQIHYILVLQFQLHLPRNCRKYSNLVTFEEDGKIDSFL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="29500" PGL_stop="29168"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29500" e_stop="29168"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="29500" e_stop="29168" e_length="333"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29500" stop="29168"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277810" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAGAGTGGTGTTTGTTCTGCTGGTTTTAGTACGACAGTGTTACCACAAGCAAGTGCAGGGCCAACTTTCCAGGCGAACATTAATAACGGAAAATTCCAGGGTATTATCTGTCCTGCAACACCAATTGGCTCATGCAGGGTCTGAACATGGTGCAAACTGTCAGCAGGAGCTGTAAGACCATGAATTTTATCAGCCCAACCTGAATAAGAAATGTAAGCAGAAATACTTAGAAAAGCATTTAGGGTGATTCAGCAAACATTAGAACGTCAATTGATATACAATAAGTGGTTATTAAACTGTCAAAAGGAAACATAACGCCATTTTTCTTATTT</gDNA_template>
            <first_frame> R  E  W  C  L  F  C  W  F  *  Y  D  S  V  T  T  S  K  C  R  A  N  F  P  G  E  H  *  *  R  K  I  P  G  Y  Y  L  S  C  N  T  N  W  L  M  Q  G  L  N  M  V  Q  T  V  S  R  S  C  K  T  M  N  F  I  S  P  T  *  I  R  N  V  S  R  N  T  *  K  S  I  *  G  D  S  A  N  I  R  T  S  I  D  I  Q  *  V  V  I  K  L  S  K  G  N  I  T  P  F  F  L  F </first_frame>
            <second_frame>  E  S  G  V  C  S  A  G  F  S  T  T  V  L  P  Q  A  S  A  G  P  T  F  Q  A  N  I  N  N  G  K  F  Q  G  I  I  C  P  A  T  P  I  G  S  C  R  V  *  T  W  C  K  L  S  A  G  A  V  R  P  *  I  L  S  A  Q  P  E  *  E  M  *  A  E  I  L  R  K  A  F  R  V  I  Q  Q  T  L  E  R  Q  L  I  Y  N  K  W  L  L  N  C  Q  K  E  T  *  R  H  F  S  Y   </second_frame>
            <third_frame>   R  V  V  F  V  L  L  V  L  V  R  Q  C  Y  H  K  Q  V  Q  G  Q  L  S  R  R  T  L  I  T  E  N  S  R  V  L  S  V  L  Q  H  Q  L  A  H  A  G  S  E  H  G  A  N  C  Q  Q  E  L  *  D  H  E  F  Y  Q  P  N  L  N  K  K  C  K  Q  K  Y  L  E  K  H  L  G  *  F  S  K  H  *  N  V  N  *  Y  T  I  S  G  Y  *  T  V  K  R  K  H  N  A  I  F  L  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0016A12.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="32117" PGL_stop="31572"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="32117" e_stop="31572"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="32117" e_stop="31572" e_length="546"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32117" stop="31572"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300805" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32048" stop="31868"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281199" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCATTGAACAAGATATATACCGTAGTAATATAGAATTATAACATTACATCTATATATAATTCATTACATTCCCACAAAACTCAAACACAAGATCCTATTTTGCATCAGAGCTACAGAAATCAAGAAAGGTCTCACACAAACAAGTTTGCATATTGTTATCAAATCATAAGAAGTTAGTAACAAACAATAACACACACACAATACAGCGTTTTGGTCTTATCTACACTGTATACAAGTGACCTCTAAAAGACAAGATTGCCGTGTTGCACGACATCTCAGGAGTACCAGAAAGCAGGGGGGAAAACTACAGCCATGCTGGATTCTTCAGAGGGGTAACAATAGCTTTGACTTGCAAGTAGTTACTTAGGCTGTAGACTCCCTTCTCTCTTCCATGTCCACTCATCTTATAACCACCAAACGGAATGGCAGCATCAAAGATGTTAAAGCAGTTAACCCACACTGTCCCTACTCTAAGGGCTCGAGATATTGTGTTGGCTGCATCTATATTCTGGGTAAAAACACCCGCTGCCAACCCATAATGTGAC</gDNA_template>
            <first_frame> F  I  E  Q  D  I  Y  R  S  N  I  E  L  *  H  Y  I  Y  I  *  F  I  T  F  P  Q  N  S  N  T  R  S  Y  F  A  S  E  L  Q  K  S  R  K  V  S  H  K  Q  V  C  I  L  L  S  N  H  K  K  L  V  T  N  N  N  T  H  T  I  Q  R  F  G  L  I  Y  T  V  Y  K  *  P  L  K  D  K  I  A  V  L  H  D  I  S  G  V  P  E  S  R  G  E  N  Y  S  H  A  G  F  F  R  G  V  T  I  A  L  T  C  K  *  L  L  R  L  *  T  P  F  S  L  P  C  P  L  I  L  *  P  P  N  G  M  A  A  S  K  M  L  K  Q  L  T  H  T  V  P  T  L  R  A  R  D  I  V  L  A  A  S  I  F  W  V  K  T  P  A  A  N  P  *  C  D </first_frame>
            <second_frame>  S  L  N  K  I  Y  T  V  V  I  *  N  Y  N  I  T  S  I  Y  N  S  L  H  S  H  K  T  Q  T  Q  D  P  I  L  H  Q  S  Y  R  N  Q  E  R  S  H  T  N  K  F  A  Y  C  Y  Q  I  I  R  S  *  *  Q  T  I  T  H  T  Q  Y  S  V  L  V  L  S  T  L  Y  T  S  D  L  *  K  T  R  L  P  C  C  T  T  S  Q  E  Y  Q  K  A  G  G  K  T  T  A  M  L  D  S  S  E  G  *  Q  *  L  *  L  A  S  S  Y  L  G  C  R  L  P  S  L  F  H  V  H  S  S  Y  N  H  Q  T  E  W  Q  H  Q  R  C  *  S  S  *  P  T  L  S  L  L  *  G  L  E  I  L  C  W  L  H  L  Y  S  G  *  K  H  P  L  P  T  H  N  V   </second_frame>
            <third_frame>   H  *  T  R  Y  I  P  *  *  Y  R  I  I  T  L  H  L  Y  I  I  H  Y  I  P  T  K  L  K  H  K  I  L  F  C  I  R  A  T  E  I  K  K  G  L  T  Q  T  S  L  H  I  V  I  K  S  *  E  V  S  N  K  Q  *  H  T  H  N  T  A  F  W  S  Y  L  H  C  I  Q  V  T  S  K  R  Q  D  C  R  V  A  R  H  L  R  S  T  R  K  Q  G  G  K  L  Q  P  C  W  I  L  Q  R  G  N  N  S  F  D  L  Q  V  V  T  *  A  V  D  S  L  L  S  S  M  S  T  H  L  I  T  T  K  R  N  G  S  I  K  D  V  K  A  V  N  P  H  C  P  Y  S  K  G  S  R  Y  C  V  G  C  I  Y  I  L  G  K  N  T  R  C  Q  P  I  M  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0016A12.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="41015" PGL_stop="36906"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="41015" e_stop="40792"/>
            <exon e_start="39338" e_stop="39050"/>
            <exon e_start="38928" e_stop="38822"/>
            <exon e_start="38687" e_stop="38555"/>
            <exon e_start="38452" e_stop="38258"/>
            <exon e_start="37488" e_stop="36906"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.912" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.878" acc_prob="0.849" e_score="1.000"/>
          <exon-intron don_prob="0.949" acc_prob="0.785" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="41015" e_stop="40792" e_length="224"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.912">
            <gDNA_intron_boundary i_start="40791" i_stop="39339" i_length="1453"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="39338" e_stop="39050" e_length="289"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.985">
            <gDNA_intron_boundary i_start="39049" i_stop="38929" i_length="121"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="38928" e_stop="38822" e_length="107"/>
          </exon>
          <intron i_serial="3" don_prob="0.878" acc_prob="0.849">
            <gDNA_intron_boundary i_start="38821" i_stop="38688" i_length="134"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="38687" e_stop="38555" e_length="133"/>
          </exon>
          <intron i_serial="4" don_prob="0.949" acc_prob="0.785">
            <gDNA_intron_boundary i_start="38554" i_stop="38453" i_length="102"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="38452" e_stop="38258" e_length="195"/>
          </exon>
          <intron i_serial="5" don_prob="0.975" acc_prob="0.997">
            <gDNA_intron_boundary i_start="38257" i_stop="37489" i_length="769"/>
          </intron>
          <exon e_serial="6" e_score="0.996">
            <gDNA_exon_boundary e_start="37488" e_stop="36906" e_length="583"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41015" stop="40792"/>
              <exon start="39338" stop="39050"/>
              <exon start="38928" stop="38822"/>
              <exon start="38687" stop="38656"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375974" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41015" stop="40792"/>
              <exon start="39338" stop="39050"/>
              <exon start="38928" stop="38908"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323625" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41001" stop="40792"/>
              <exon start="39338" stop="39053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319500" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40901" stop="40792"/>
              <exon start="39338" stop="39050"/>
              <exon start="38928" stop="38822"/>
              <exon start="38687" stop="38555"/>
              <exon start="38452" stop="38379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348677" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40862" stop="40792"/>
              <exon start="39338" stop="39050"/>
              <exon start="38928" stop="38822"/>
              <exon start="38687" stop="38555"/>
              <exon start="38452" stop="38258"/>
              <exon start="37488" stop="37420"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E689210" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40861" stop="40792"/>
              <exon start="39338" stop="39050"/>
              <exon start="38928" stop="38822"/>
              <exon start="38687" stop="38675"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324984" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40823" stop="40792"/>
              <exon start="39338" stop="39050"/>
              <exon start="38928" stop="38822"/>
              <exon start="38687" stop="38555"/>
              <exon start="38452" stop="38386"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E687715" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38603" stop="38555"/>
              <exon start="38452" stop="38258"/>
              <exon start="37488" stop="37022"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375973" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37384" stop="36906"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253024" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGTGCTGCCGGCCCAATTTTGGTGTGAAATAGCGCCGTCTCATTCTACTGTTCTCGCCGGTTACAAATATCTCTTTTCTACTCTCTCTGTCTATTACTCTTCACTCACTATACACATAAAATCCTCCATTGTTTAGTAGGTTAAAATCTGCTTGTCGTTGAAGAGGAGAGTTCAAAATCATTTCGATTTGCTGCTTTACCCGATCATTTCACCGCATTTTCCTG : ATCTAATCCATATATGATGTCTGAGGAAGCTGCTAGAGATCTCATTCCACTACCTGAAGCTGGGATGAACAATGAGATCCCCAGTAATGGGAGTGTTCCAGCAATAAGGGTTGAGAGCATTGATAAAAATTCAAAAGATAAGGAAAGAGAAAATCCTGCCTTACTGGTTGGACCTTGCCTTAATGGAGACGGTAAGGTGAATACTGGGGCAGAGGTGGGAAATTCTGAAGTGGAATACATAGAATCTGAGAATTTGAATGATGTAGAAGATGTTGACACAAGTCTCAAG : ACACTGTTGACTGGGCTTGACTCCAAGGACTGGGTTTTAGTCTGTGAGGCACTCAATGACGTTCGGCGTCTGTCCCTATTTCACAAAGAAGCAATGGTTGATATGTT : GAGAAATGTGATCTCCCTTGTTGTGAAATCTTTGAAAAATCCGAGAAGTGCTGTTTGTAAGACTGCTATTATGGCATCAGCTGACATTTTCAAAGCATACTGTGACACCATAGTTGACTTGATGGATCCACTG : CTTGTACAACTTCTTCTGAAGTCTTCACAAGACAAGCGATTTGTTTGCGAGGCAGCTGAAAAAGCTCTAAAAGCAATGACAATGTGGGTTTCTCCATCGCTGTTGTTACCGAAGTTGCAACCAAATTTGAAACACAGAAATCCTAGAATTCGAGCAAAAGCTTCAAGCTGCTTTTCTCGAAGTGTACCACGTCTG : GGAGTAGAGGGAATTAAAGCATATGGAATTGAGAACTTGATCCGAATAGCTGCATCGCAGCTCAGTGACCAGCTTCCTGAGTCGAGGGAGGCCGCTCGTTCACTGTTGTTAGAACTGCAAAATATCTACGAAAAAGCATTCAATGTTATCCCCCCACCAGTAGTGAATGAAGACCCAGAAACAATTACCGTGAGTGAGGACCCAGAAACAATATCCTGGGAGCATTTCTGTCAATCAAAGCTCTCACCTTTGAGTGCTCAAGCAGTTCTTCGTGTAACCAATCTCACTAGGGAGGGTATTGTTTTAGGTTCATAGTATTTGTTCAAGCAATGAGCTATAATTCACCATTGTCCTCCATTTTTTGGTTTGGTTTCTTATACCTGTATATACCATGAAAGGTTTCAGGTGTTTGCGAGGCAGTTAGACCATATATAGAGCTATAGTTCTATAGTTTCTTGAAATATGGTTTAGATTACGTTTGCATTATACTTAAAGTCATTCATGAATGCTTGCTTTGCATTGCAGTATACATGTAATTGTGCTCGTTCATTTTTCCCATGGTATGTTAATGATTGAAAAGCAA</gDNA_template>
            <first_frame> R  A  A  G  P  I  L  V  *  N  S  A  V  S  F  Y  C  S  R  R  L  Q  I  S  L  F  Y  S  L  C  L  L  L  F  T  H  Y  T  H  K  I  L  H  C  L  V  G  *  N  L  L  V  V  E  E  E  S  S  K  S  F  R  F  A  A  L  P  D  H  F  T  A  F  S  * :   S  N  P  Y  M  M  S  E  E  A  A  R  D  L  I  P  L  P  E  A  G  M  N  N  E  I  P  S  N  G  S  V  P  A  I  R  V  E  S  I  D  K  N  S  K  D  K  E  R  E  N  P  A  L  L  V  G  P  C  L  N  G  D  G  K  V  N  T  G  A  E  V  G  N  S  E  V  E  Y  I  E  S  E  N  L  N  D  V  E  D  V  D  T  S  L  K  :  T  L  L  T  G  L  D  S  K  D  W  V  L  V  C  E  A  L  N  D  V  R  R  L  S  L  F  H  K  E  A  M  V  D  M  L :   R  N  V  I  S  L  V  V  K  S  L  K  N  P  R  S  A  V  C  K  T  A  I  M  A  S  A  D  I  F  K  A  Y  C  D  T  I  V  D  L  M  D  P  L  :  L  V  Q  L  L  L  K  S  S  Q  D  K  R  F  V  C  E  A  A  E  K  A  L  K  A  M  T  M  W  V  S  P  S  L  L  L  P  K  L  Q  P  N  L  K  H  R  N  P  R  I  R  A  K  A  S  S  C  F  S  R  S  V  P  R  L  :  G  V  E  G  I  K  A  Y  G  I  E  N  L  I  R  I  A  A  S  Q  L  S  D  Q  L  P  E  S  R  E  A  A  R  S  L  L  L  E  L  Q  N  I  Y  E  K  A  F  N  V  I  P  P  P  V  V  N  E  D  P  E  T  I  T  V  S  E  D  P  E  T  I  S  W  E  H  F  C  Q  S  K  L  S  P  L  S  A  Q  A  V  L  R  V  T  N  L  T  R  E  G  I  V  L  G  S  *  Y  L  F  K  Q  *  A  I  I  H  H  C  P  P  F  F  G  L  V  S  Y  T  C  I  Y  H  E  R  F  Q  V  F  A  R  Q  L  D  H  I  *  S  Y  S  S  I  V  S  *  N  M  V  *  I  T  F  A  L  Y  L  K  S  F  M  N  A  C  F  A  L  Q  Y  T  C  N  C  A  R  S  F  F  P  W  Y  V  N  D  *  K  A  </first_frame>
            <second_frame>  V  L  P  A  Q  F  W  C  E  I  A  P  S  H  S  T  V  L  A  G  Y  K  Y  L  F  S  T  L  S  V  Y  Y  S  S  L  T  I  H  I  K  S  S  I  V  *  *  V  K  I  C  L  S  L  K  R  R  V  Q  N  H  F  D  L  L  L  Y  P  I  I  S  P  H  F  P   : D  L  I  H  I  *  C  L  R  K  L  L  E  I  S  F  H  Y  L  K  L  G  *  T  M  R  S  P  V  M  G  V  F  Q  Q  *  G  L  R  A  L  I  K  I  Q  K  I  R  K  E  K  I  L  P  Y  W  L  D  L  A  L  M  E  T  V  R  *  I  L  G  Q  R  W  E  I  L  K  W  N  T  *  N  L  R  I  *  M  M  *  K  M  L  T  Q  V  S  R :   H  C  *  L  G  L  T  P  R  T  G  F  *  S  V  R  H  S  M  T  F  G  V  C  P  Y  F  T  K  K  Q  W  L  I  C   : *  E  M  *  S  P  L  L  *  N  L  *  K  I  R  E  V  L  F  V  R  L  L  L  W  H  Q  L  T  F  S  K  H  T  V  T  P  *  L  T  *  W  I  H  C :   L  Y  N  F  F  *  S  L  H  K  T  S  D  L  F  A  R  Q  L  K  K  L  *  K  Q  *  Q  C  G  F  L  H  R  C  C  Y  R  S  C  N  Q  I  *  N  T  E  I  L  E  F  E  Q  K  L  Q  A  A  F  L  E  V  Y  H  V  W :   E  *  R  E  L  K  H  M  E  L  R  T  *  S  E  *  L  H  R  S  S  V  T  S  F  L  S  R  G  R  P  L  V  H  C  C  *  N  C  K  I  S  T  K  K  H  S  M  L  S  P  H  Q  *  *  M  K  T  Q  K  Q  L  P  *  V  R  T  Q  K  Q  Y  P  G  S  I  S  V  N  Q  S  S  H  L  *  V  L  K  Q  F  F  V  *  P  I  S  L  G  R  V  L  F  *  V  H  S  I  C  S  S  N  E  L  *  F  T  I  V  L  H  F  L  V  W  F  L  I  P  V  Y  T  M  K  G  F  R  C  L  R  G  S  *  T  I  Y  R  A  I  V  L  *  F  L  E  I  W  F  R  L  R  L  H  Y  T  *  S  H  S  *  M  L  A  L  H  C  S  I  H  V  I  V  L  V  H  F  S  H  G  M  L  M  I  E  K  Q </second_frame>
            <third_frame>   C  C  R  P  N  F  G  V  K  *  R  R  L  I  L  L  F  S  P  V  T  N  I  S  F  L  L  S  L  S  I  T  L  H  S  L  Y  T  *  N  P  P  L  F  S  R  L  K  S  A  C  R  *  R  G  E  F  K  I  I  S  I  C  C  F  T  R  S  F  H  R  I  F  L  :  I  *  S  I  Y  D  V  *  G  S  C  *  R  S  H  S  T  T  *  S  W  D  E  Q  *  D  P  Q  *  W  E  C  S  S  N  K  G  *  E  H  *  *  K  F  K  R  *  G  K  R  K  S  C  L  T  G  W  T  L  P  *  W  R  R  *  G  E  Y  W  G  R  G  G  K  F  *  S  G  I  H  R  I  *  E  F  E  *  C  R  R  C  *  H  K  S  Q   : D  T  V  D  W  A  *  L  Q  G  L  G  F  S  L  *  G  T  Q  *  R  S  A  S  V  P  I  S  Q  R  S  N  G  *  Y  V  :  E  K  C  D  L  P  C  C  E  I  F  E  K  S  E  K  C  C  L  *  D  C  Y  Y  G  I  S  *  H  F  Q  S  I  L  *  H  H  S  *  L  D  G  S  T   : A  C  T  T  S  S  E  V  F  T  R  Q  A  I  C  L  R  G  S  *  K  S  S  K  S  N  D  N  V  G  F  S  I  A  V  V  T  E  V  A  T  K  F  E  T  Q  K  S  *  N  S  S  K  S  F  K  L  L  F  S  K  C  T  T  S   : G  S  R  G  N  *  S  I  W  N  *  E  L  D  P  N  S  C  I  A  A  Q  *  P  A  S  *  V  E  G  G  R  S  F  T  V  V  R  T  A  K  Y  L  R  K  S  I  Q  C  Y  P  P  T  S  S  E  *  R  P  R  N  N  Y  R  E  *  G  P  R  N  N  I  L  G  A  F  L  S  I  K  A  L  T  F  E  C  S  S  S  S  S  C  N  Q  S  H  *  G  G  Y  C  F  R  F  I  V  F  V  Q  A  M  S  Y  N  S  P  L  S  S  I  F  W  F  G  F  L  Y  L  Y  I  P  *  K  V  S  G  V  C  E  A  V  R  P  Y  I  E  L  *  F  Y  S  F  L  K  Y  G  L  D  Y  V  C  I  I  L  K  V  I  H  E  C  L  L  C  I  A  V  Y  M  *  L  C  S  F  I  F  P  M  V  C  *  *  L  K  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="39337" stop="39050"/>
                    <exon start="38928" stop="38822"/>
                    <exon start="38687" stop="38555"/>
                    <exon start="38452" stop="38258"/>
                    <exon start="37488" stop="37174"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1035</number_coding_nucleotides>
                  <number_encoded_amino_acids>345</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SNPYMMSEEAARDLIPLPEAGMNNEIPSNGSVPAIRVESIDKNSKDKERENPALLVGPCLNGDGKVNTGAEVGNSEVEYIESENLNDVEDVDTSLKTLLTGLDSKDWVLVCEALNDVRRLSLFHKEAMVDMLRNVISLVVKSLKNPRSAVCKTAIMASADIFKAYCDTIVDLMDPLLVQLLLKSSQDKRFVCEAAEKALKAMTMWVSPSLLLPKLQPNLKHRNPRIRAKASSCFSRSVPRLGVEGIKAYGIENLIRIAASQLSDQLPESREAARSLLLELQNIYEKAFNVIPPPVVNEDPETITVSEDPETISWEHFCQSKLSPLSAQAVLRVTNLTREGIVLGS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="47954" PGL_stop="44377"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="47954" e_stop="47411"/>
            <exon e_start="46860" e_stop="46724"/>
            <exon e_start="46275" e_stop="46036"/>
            <exon e_start="44905" e_stop="44377"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.784" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="47954" e_stop="47411" e_length="544"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="47410" i_stop="46861" i_length="550"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="46860" e_stop="46724" e_length="137"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.784">
            <gDNA_intron_boundary i_start="46723" i_stop="46276" i_length="448"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="46275" e_stop="46036" e_length="240"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="46035" i_stop="44906" i_length="1130"/>
          </intron>
          <exon e_serial="4" e_score="0.996">
            <gDNA_exon_boundary e_start="44905" e_stop="44377" e_length="529"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47954" stop="47411"/>
              <exon start="46860" stop="46724"/>
              <exon start="46275" stop="46036"/>
              <exon start="44905" stop="44377"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745450" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47936" stop="47411"/>
              <exon start="46860" stop="46724"/>
              <exon start="46275" stop="46067"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703216" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47936" stop="47411"/>
              <exon start="46860" stop="46724"/>
              <exon start="46275" stop="46076"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E700601" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47936" stop="47411"/>
              <exon start="46860" stop="46728"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321961" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47936" stop="47469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318784" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47935" stop="47411"/>
              <exon start="46860" stop="46759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207270" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47935" stop="47411"/>
              <exon start="46860" stop="46836"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308767" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47935" stop="47613"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297411" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47934" stop="47411"/>
              <exon start="46860" stop="46724"/>
              <exon start="46275" stop="46071"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727404" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47929" stop="47703"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365709" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47927" stop="47520"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267889" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47925" stop="47468"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207269" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47924" stop="47411"/>
              <exon start="46860" stop="46728"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327132" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47913" stop="47466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47887" stop="47540"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E724262" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47883" stop="47411"/>
              <exon start="46860" stop="46724"/>
              <exon start="46275" stop="46068"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47882" stop="47411"/>
              <exon start="46860" stop="46724"/>
              <exon start="46275" stop="46061"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736423" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47881" stop="47411"/>
              <exon start="46860" stop="46724"/>
              <exon start="46275" stop="46061"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726372" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47789" stop="47411"/>
              <exon start="46860" stop="46842"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697835" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47763" stop="47411"/>
              <exon start="46860" stop="46737"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267132" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47640" stop="47411"/>
              <exon start="46860" stop="46724"/>
              <exon start="46275" stop="46169"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319757" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47554" stop="47411"/>
              <exon start="46860" stop="46724"/>
              <exon start="46275" stop="46036"/>
              <exon start="44905" stop="44581"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705831" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47445" stop="47411"/>
              <exon start="46860" stop="46724"/>
              <exon start="46275" stop="46036"/>
              <exon start="44905" stop="44385"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E699978" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46860" stop="46724"/>
              <exon start="46275" stop="46036"/>
              <exon start="44905" stop="44801"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305045" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46858" stop="46724"/>
              <exon start="46275" stop="46036"/>
              <exon start="44905" stop="44455"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704716" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44905" stop="44410"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712774" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44863" stop="44391"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712125" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44858" stop="44382"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219978" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44752" stop="44391"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353979" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44742" stop="44382"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219738" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44718" stop="44377"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224406" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44634" stop="44387"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308350" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAGTCGCAAAATAAACTTACAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG : GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAG : GTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAAAGATAACGATAAGCTCAAATCTGAG : GTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTTATTCTCTTGATTTA</gDNA_template>
            <first_frame> *  S  Q  N  K  L  T  K  Q  H  I  Y  I  E  T  K  S  H  N  T  P  S  P  E  S  Y  F  H  C  R  R  P  L  K  L  F  F  S  S  S  E  V  K  *  L  T  S  D  R  K  K  *  L  F  *  L  L  L  F  N  L  K  T  G  K  P  L  S  W  L  R  W  I  S  *  W  D  F  V  F  V  L  W  K  L  L  L  D  Y  C  G  V  L  V  S  S  A  T  S  L  C  S  S  K  T  *  S  T  L  F  F  H  T  H  P  C  *  K  R  R  T  L  C  W  S  F  C  F  P  F  S  V  S  P  E  T  Y  K  *  S  S  V  C  K  *  A  I  F  Q  I  V  E  N  M  G  S  G  H  I  F  F  D  P  S  S  C  H  G  N  M  L  F  L  G  S  G  D  P  V  F  R   : G  P  R  S  T  M  M  K  M  E  D  S  S  K  R  R  P  F  F  S  S  P  E  D  L  Y  D  E  E  Y  Y  D  E  Q  S  P  E  K  K  R  R  L  T  P  E  Q  :  V  H  L  L  E  K  S  F  E  T  E  N  K  L  E  P  E  R  K  T  Q  L  A  K  K  L  G  L  Q  P  R  Q  V  A  V  W  F  Q  N  R  R  A  R  W  K  T  K  Q  L  E  R  D  Y  D  Q  L  K  S  S  Y  D  S  L  L  S  D  F  D  S  V  R  K  D  N  D  K  L  K  S  E  :  V  V  S  L  M  E  K  L  Q  G  K  V  V  G  G  A  G  G  N  E  K  S  D  I  L  E  V  D  A  M  T  I  L  Q  V  K  V  K  A  E  D  R  L  S  S  G  S  G  G  S  A  V  V  D  E  H  S  P  Q  L  V  D  S  G  D  S  Y  F  H  T  D  H  E  E  Y  P  G  P  G  G  C  N  V  P  P  P  M  D  G  L  Q  S  E  E  D  D  G  S  D  D  H  G  S  C  H  G  Y  F  S  N  V  F  V  A  E  E  Q  H  H  E  Q  G  E  E  P  I  G  W  F  W  S  *  L  N  F  R  I  L  Y  Y  S  F  S  Y  L  R  A  L  C  M  M  K  *  V  S  *  F  Q  L  L  I  *  T  S  I  N  M  L  L  Q  L  L  F  S  *  F  </first_frame>
            <second_frame>  S  R  K  I  N  L  Q  N  S  T  Y  I  *  R  Q  N  H  I  I  R  P  R  R  N  L  I  F  T  V  A  G  R  *  N  F  F  F  L  V  R  R  S  N  N  *  P  P  I  G  R  S  S  Y  S  N  C  F  Y  L  I  *  K  R  E  N  P  *  A  G  *  G  G  F  R  D  G  I  L  Y  L  S  F  G  N  S  C  *  I  T  V  E  Y  *  F  L  P  P  Q  A  Y  A  L  L  K  L  S  Q  L  S  F  F  I  H  I  P  A  K  K  E  E  L  C  A  G  V  F  V  F  L  F  L  F  R  R  K  H  I  N  N  L  L  C  V  N  R  R  F  S  R  *  L  K  I  W  D  L  G  I  Y  F  S  T  R  R  R  V  T  A  T  C  C  S  L  G  A  E  I  L  F  S  E  :  D  Q  D  R  R  *  *  R  W  R  T  P  R  R  G  D  P  S  L  A  R  R  R  I  Y  M  T  R  N  T  T  T  S  S  H  R  R  R  S  A  V  S  L  L  S  R :   C  T  C  W  R  R  A  L  R  Q  K  T  S  W  S  P  S  A  K  P  S  W  P  K  S  W  G  C  S  P  D  R  W  L  Y  G  S  K  T  A  V  P  G  G  R  P  S  S  S  R  G  I  M  I  S  S  N  P  L  M  T  P  F  S  L  I  L  T  P  F  A  K  I  T  I  S  S  N  L  R :   L  F  H  *  W  K  S  Y  R  G  K  W  L  E  E  Q  G  E  M  K  N  L  T  S  W  R  W  M  L  *  R  S  F  K  *  R  *  R  L  R  T  G  *  A  V  A  V  V  G  A  R  W  *  M  S  I  V  H  S  W  W  T  V  G  T  H  I  F  T  L  I  M  R  S  I  Q  G  L  E  D  A  M  F  L  H  P  W  M  V  Y  N  R  R  K  M  M  V  V  M  I  M  A  V  A  M  A  T  S  L  T  S  L  W  Q  K  S  S  T  M  N  K  E  K  S  L  L  D  G  S  G  L  N  *  I  L  E  Y  Y  I  T  V  F  L  I  Y  A  R  F  V  *  *  N  K  C  R  N  S  N  F  L  F  K  H  L  L  I  C  F  C  S  F  Y  S  L  D  L </second_frame>
            <third_frame>   V  A  K  *  T  Y  K  T  A  H  I  Y  R  D  K  I  T  *  Y  A  L  A  G  I  L  F  S  L  S  P  A  V  K  T  F  F  F  *  F  G  G  Q  I  I  N  L  R  S  E  E  V  V  I  L  T  A  S  I  *  S  E  N  G  K  T  P  E  L  V  K  V  D  F  V  M  G  F  C  I  C  P  L  E  T  P  A  R  L  L  W  S  T  S  F  F  R  H  K  L  M  L  F  *  N  L  V  N  S  L  F  S  Y  T  S  L  L  K  K  K  N  S  V  L  E  F  L  F  S  F  F  C  F  A  G  N  I  *  I  I  F  C  V  *  I  G  D  F  P  D  S  *  K  Y  G  I  W  A  Y  I  F  R  P  V  V  V  S  R  Q  H  A  V  P  W  E  R  R  S  C  F  P  R :   T  K  I  D  D  D  E  D  G  G  L  L  E  E  A  T  L  L  *  L  A  G  G  S  I  *  R  G  I  L  R  R  A  V  T  G  E  E  A  P  S  H  S  *  A   : G  A  L  V  G  E  E  L  *  D  R  K  Q  A  G  A  R  A  Q  N  P  A  G  Q  K  A  G  A  A  A  Q  T  G  G  C  M  V  P  K  P  P  C  P  V  E  D  Q  A  A  R  E  G  L  *  S  A  Q  I  L  L  *  L  P  S  L  *  F  *  L  R  S  Q  R  *  R  *  A  Q  I  *   : G  C  F  I  D  G  K  V  T  G  E  S  G  W  R  S  R  G  K  *  K  I  *  H  L  G  G  G  C  Y  D  D  P  S  S  E  G  E  G  *  G  P  V  E  Q  W  Q  W  W  E  R  G  G  R  *  A  *  S  T  A  G  G  Q  W  G  L  I  F  S  H  *  S  *  G  V  S  R  A  W  R  M  Q  C  S  S  T  H  G  W  F  T  I  G  G  R  *  W  *  *  *  S  W  Q  L  P  W  L  L  L  *  R  L  C  G  R  R  A  A  P  *  T  R  R  R  A  Y  W  M  V  L  V  L  I  E  F  *  N  I  I  L  Q  F  F  L  S  T  R  A  L  Y  D  E  I  S  V  V  I  P  T  S  Y  L  N  I  Y  *  Y  A  F  A  A  F  I  L  L  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47519" stop="47411"/>
                    <exon start="46860" stop="46724"/>
                    <exon start="46275" stop="46036"/>
                    <exon start="44905" stop="44510"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>879</number_coding_nucleotides>
                  <number_encoded_amino_acids>293</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AIFQIVENMGSGHIFFDPSSCHGNMLFLGSGDPVFRGPRSTMMKMEDSSKRRPFFSSPEDLYDEEYYDEQSPEKKRRLTPEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDQLKSSYDSLLSDFDSVRKDNDKLKSEVVSLMEKLQGKVVGGAGGNEKSDILEVDAMTILQVKVKAEDRLSSGSGGSAVVDEHSPQLVDSGDSYFHTDHEEYPGPGGCNVPPPMDGLQSEEDDGSDDHGSCHGYFSNVFVAEEQHHEQGEEPIGWFWS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="47937" e_stop="47411"/>
            <exon e_start="46860" e_stop="46724"/>
            <exon e_start="44905" e_stop="44377"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="47937" e_stop="47411" e_length="527"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="47410" i_stop="46861" i_length="550"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="46860" e_stop="46724" e_length="137"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="46723" i_stop="44906" i_length="1818"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="44905" e_stop="44377" e_length="529"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47937" stop="47411"/>
              <exon start="46860" stop="46724"/>
              <exon start="44905" stop="44689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706629" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47936" stop="47411"/>
              <exon start="46860" stop="46728"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321961" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47936" stop="47469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318784" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47935" stop="47411"/>
              <exon start="46860" stop="46759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207270" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47935" stop="47411"/>
              <exon start="46860" stop="46836"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308767" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47935" stop="47613"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297411" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47929" stop="47703"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365709" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47927" stop="47520"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267889" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47925" stop="47468"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207269" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47924" stop="47411"/>
              <exon start="46860" stop="46728"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327132" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47913" stop="47466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47887" stop="47540"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E724262" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47879" stop="47411"/>
              <exon start="46860" stop="46724"/>
              <exon start="44905" stop="44802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E718572" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47789" stop="47411"/>
              <exon start="46860" stop="46842"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697835" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47763" stop="47411"/>
              <exon start="46860" stop="46737"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267132" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44905" stop="44410"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712774" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44863" stop="44391"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712125" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44858" stop="44382"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219978" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44752" stop="44391"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353979" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44742" stop="44382"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219738" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44718" stop="44377"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224406" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44634" stop="44387"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308350" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TACAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG : GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAG : GTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTTATTCTCTTGATTTA</gDNA_template>
            <first_frame> Y  K  T  A  H  I  Y  R  D  K  I  T  *  Y  A  L  A  G  I  L  F  S  L  S  P  A  V  K  T  F  F  F  *  F  G  G  Q  I  I  N  L  R  S  E  E  V  V  I  L  T  A  S  I  *  S  E  N  G  K  T  P  E  L  V  K  V  D  F  V  M  G  F  C  I  C  P  L  E  T  P  A  R  L  L  W  S  T  S  F  F  R  H  K  L  M  L  F  *  N  L  V  N  S  L  F  S  Y  T  S  L  L  K  K  K  N  S  V  L  E  F  L  F  S  F  F  C  F  A  G  N  I  *  I  I  F  C  V  *  I  G  D  F  P  D  S  *  K  Y  G  I  W  A  Y  I  F  R  P  V  V  V  S  R  Q  H  A  V  P  W  E  R  R  S  C  F  P  R :   T  K  I  D  D  D  E  D  G  G  L  L  E  E  A  T  L  L  *  L  A  G  G  S  I  *  R  G  I  L  R  R  A  V  T  G  E  E  A  P  S  H  S  *  A   : G  C  F  I  D  G  K  V  T  G  E  S  G  W  R  S  R  G  K  *  K  I  *  H  L  G  G  G  C  Y  D  D  P  S  S  E  G  E  G  *  G  P  V  E  Q  W  Q  W  W  E  R  G  G  R  *  A  *  S  T  A  G  G  Q  W  G  L  I  F  S  H  *  S  *  G  V  S  R  A  W  R  M  Q  C  S  S  T  H  G  W  F  T  I  G  G  R  *  W  *  *  *  S  W  Q  L  P  W  L  L  L  *  R  L  C  G  R  R  A  A  P  *  T  R  R  R  A  Y  W  M  V  L  V  L  I  E  F  *  N  I  I  L  Q  F  F  L  S  T  R  A  L  Y  D  E  I  S  V  V  I  P  T  S  Y  L  N  I  Y  *  Y  A  F  A  A  F  I  L  L  I   </first_frame>
            <second_frame>  T  K  Q  H  I  Y  I  E  T  K  S  H  N  T  P  S  P  E  S  Y  F  H  C  R  R  P  L  K  L  F  F  S  S  S  E  V  K  *  L  T  S  D  R  K  K  *  L  F  *  L  L  L  F  N  L  K  T  G  K  P  L  S  W  L  R  W  I  S  *  W  D  F  V  F  V  L  W  K  L  L  L  D  Y  C  G  V  L  V  S  S  A  T  S  L  C  S  S  K  T  *  S  T  L  F  F  H  T  H  P  C  *  K  R  R  T  L  C  W  S  F  C  F  P  F  S  V  S  P  E  T  Y  K  *  S  S  V  C  K  *  A  I  F  Q  I  V  E  N  M  G  S  G  H  I  F  F  D  P  S  S  C  H  G  N  M  L  F  L  G  S  G  D  P  V  F  R   : G  P  R  S  T  M  M  K  M  E  D  S  S  K  R  R  P  F  F  S  S  P  E  D  L  Y  D  E  E  Y  Y  D  E  Q  S  P  E  K  K  R  R  L  T  P  E  Q  :  V  V  S  L  M  E  K  L  Q  G  K  V  V  G  G  A  G  G  N  E  K  S  D  I  L  E  V  D  A  M  T  I  L  Q  V  K  V  K  A  E  D  R  L  S  S  G  S  G  G  S  A  V  V  D  E  H  S  P  Q  L  V  D  S  G  D  S  Y  F  H  T  D  H  E  E  Y  P  G  P  G  G  C  N  V  P  P  P  M  D  G  L  Q  S  E  E  D  D  G  S  D  D  H  G  S  C  H  G  Y  F  S  N  V  F  V  A  E  E  Q  H  H  E  Q  G  E  E  P  I  G  W  F  W  S  *  L  N  F  R  I  L  Y  Y  S  F  S  Y  L  R  A  L  C  M  M  K  *  V  S  *  F  Q  L  L  I  *  T  S  I  N  M  L  L  Q  L  L  F  S  *  F  </second_frame>
            <third_frame>   Q  N  S  T  Y  I  *  R  Q  N  H  I  I  R  P  R  R  N  L  I  F  T  V  A  G  R  *  N  F  F  F  L  V  R  R  S  N  N  *  P  P  I  G  R  S  S  Y  S  N  C  F  Y  L  I  *  K  R  E  N  P  *  A  G  *  G  G  F  R  D  G  I  L  Y  L  S  F  G  N  S  C  *  I  T  V  E  Y  *  F  L  P  P  Q  A  Y  A  L  L  K  L  S  Q  L  S  F  F  I  H  I  P  A  K  K  E  E  L  C  A  G  V  F  V  F  L  F  L  F  R  R  K  H  I  N  N  L  L  C  V  N  R  R  F  S  R  *  L  K  I  W  D  L  G  I  Y  F  S  T  R  R  R  V  T  A  T  C  C  S  L  G  A  E  I  L  F  S  E  :  D  Q  D  R  R  *  *  R  W  R  T  P  R  R  G  D  P  S  L  A  R  R  R  I  Y  M  T  R  N  T  T  T  S  S  H  R  R  R  S  A  V  S  L  L  S  R :   L  F  H  *  W  K  S  Y  R  G  K  W  L  E  E  Q  G  E  M  K  N  L  T  S  W  R  W  M  L  *  R  S  F  K  *  R  *  R  L  R  T  G  *  A  V  A  V  V  G  A  R  W  *  M  S  I  V  H  S  W  W  T  V  G  T  H  I  F  T  L  I  M  R  S  I  Q  G  L  E  D  A  M  F  L  H  P  W  M  V  Y  N  R  R  K  M  M  V  V  M  I  M  A  V  A  M  A  T  S  L  T  S  L  W  Q  K  S  S  T  M  N  K  E  K  S  L  L  D  G  S  G  L  N  *  I  L  E  Y  Y  I  T  V  F  L  I  Y  A  R  F  V  *  *  N  K  C  R  N  S  N  F  L  F  K  H  L  L  I  C  F  C  S  F  Y  S  L  D  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47519" stop="47411"/>
                    <exon start="46860" stop="46724"/>
                    <exon start="44905" stop="44510"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>639</number_coding_nucleotides>
                  <number_encoded_amino_acids>213</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AIFQIVENMGSGHIFFDPSSCHGNMLFLGSGDPVFRGPRSTMMKMEDSSKRRPFFSSPEDLYDEEYYDEQSPEKKRRLTPEQVVSLMEKLQGKVVGGAGGNEKSDILEVDAMTILQVKVKAEDRLSSGSGGSAVVDEHSPQLVDSGDSYFHTDHEEYPGPGGCNVPPPMDGLQSEEDDGSDDHGSCHGYFSNVFVAEEQHHEQGEEPIGWFWS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="47936" e_stop="47411"/>
            <exon e_start="46860" e_stop="46663"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="47936" e_stop="47411" e_length="526"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="47410" i_stop="46861" i_length="550"/>
          </intron>
          <exon e_serial="2" e_score="0.995">
            <gDNA_exon_boundary e_start="46860" e_stop="46663" e_length="198"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47936" stop="47411"/>
              <exon start="46860" stop="46728"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321961" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47936" stop="47469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318784" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47935" stop="47411"/>
              <exon start="46860" stop="46663"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333531" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47935" stop="47411"/>
              <exon start="46860" stop="46759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207270" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47935" stop="47411"/>
              <exon start="46860" stop="46836"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308767" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47935" stop="47613"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297411" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47929" stop="47703"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365709" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47927" stop="47520"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267889" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47925" stop="47468"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207269" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47924" stop="47411"/>
              <exon start="46860" stop="46728"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327132" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47913" stop="47466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47887" stop="47540"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E724262" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47789" stop="47411"/>
              <exon start="46860" stop="46842"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697835" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47763" stop="47411"/>
              <exon start="46860" stop="46737"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267132" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG : GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAGGTTAGCATCCTGTTCCTCCTTTATCTACCCAAAAATATAAATTAAGTAAATGCGTTTTTTT</gDNA_template>
            <first_frame> T  K  Q  H  I  Y  I  E  T  K  S  H  N  T  P  S  P  E  S  Y  F  H  C  R  R  P  L  K  L  F  F  S  S  S  E  V  K  *  L  T  S  D  R  K  K  *  L  F  *  L  L  L  F  N  L  K  T  G  K  P  L  S  W  L  R  W  I  S  *  W  D  F  V  F  V  L  W  K  L  L  L  D  Y  C  G  V  L  V  S  S  A  T  S  L  C  S  S  K  T  *  S  T  L  F  F  H  T  H  P  C  *  K  R  R  T  L  C  W  S  F  C  F  P  F  S  V  S  P  E  T  Y  K  *  S  S  V  C  K  *  A  I  F  Q  I  V  E  N  M  G  S  G  H  I  F  F  D  P  S  S  C  H  G  N  M  L  F  L  G  S  G  D  P  V  F  R   : G  P  R  S  T  M  M  K  M  E  D  S  S  K  R  R  P  F  F  S  S  P  E  D  L  Y  D  E  E  Y  Y  D  E  Q  S  P  E  K  K  R  R  L  T  P  E  Q  V  S  I  L  F  L  L  Y  L  P  K  N  I  N  *  V  N  A  F  F  </first_frame>
            <second_frame>  Q  N  S  T  Y  I  *  R  Q  N  H  I  I  R  P  R  R  N  L  I  F  T  V  A  G  R  *  N  F  F  F  L  V  R  R  S  N  N  *  P  P  I  G  R  S  S  Y  S  N  C  F  Y  L  I  *  K  R  E  N  P  *  A  G  *  G  G  F  R  D  G  I  L  Y  L  S  F  G  N  S  C  *  I  T  V  E  Y  *  F  L  P  P  Q  A  Y  A  L  L  K  L  S  Q  L  S  F  F  I  H  I  P  A  K  K  E  E  L  C  A  G  V  F  V  F  L  F  L  F  R  R  K  H  I  N  N  L  L  C  V  N  R  R  F  S  R  *  L  K  I  W  D  L  G  I  Y  F  S  T  R  R  R  V  T  A  T  C  C  S  L  G  A  E  I  L  F  S  E  :  D  Q  D  R  R  *  *  R  W  R  T  P  R  R  G  D  P  S  L  A  R  R  R  I  Y  M  T  R  N  T  T  T  S  S  H  R  R  R  S  A  V  S  L  L  S  R  L  A  S  C  S  S  F  I  Y  P  K  I  *  I  K  *  M  R  F  F </second_frame>
            <third_frame>   K  T  A  H  I  Y  R  D  K  I  T  *  Y  A  L  A  G  I  L  F  S  L  S  P  A  V  K  T  F  F  F  *  F  G  G  Q  I  I  N  L  R  S  E  E  V  V  I  L  T  A  S  I  *  S  E  N  G  K  T  P  E  L  V  K  V  D  F  V  M  G  F  C  I  C  P  L  E  T  P  A  R  L  L  W  S  T  S  F  F  R  H  K  L  M  L  F  *  N  L  V  N  S  L  F  S  Y  T  S  L  L  K  K  K  N  S  V  L  E  F  L  F  S  F  F  C  F  A  G  N  I  *  I  I  F  C  V  *  I  G  D  F  P  D  S  *  K  Y  G  I  W  A  Y  I  F  R  P  V  V  V  S  R  Q  H  A  V  P  W  E  R  R  S  C  F  P  R :   T  K  I  D  D  D  E  D  G  G  L  L  E  E  A  T  L  L  *  L  A  G  G  S  I  *  R  G  I  L  R  R  A  V  T  G  E  E  A  P  S  H  S  *  A  G  *  H  P  V  P  P  L  S  T  Q  K  Y  K  L  S  K  C  V  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47519" stop="47411"/>
                    <exon start="46860" stop="46679"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>288</number_coding_nucleotides>
                  <number_encoded_amino_acids>96</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AIFQIVENMGSGHIFFDPSSCHGNMLFLGSGDPVFRGPRSTMMKMEDSSKRRPFFSSPEDLYDEEYYDEQSPEKKRRLTPEQVSILFLLYLPKNIN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="47043" e_stop="46927"/>
            <exon e_start="46860" e_stop="46724"/>
            <exon e_start="46275" e_stop="46036"/>
            <exon e_start="44905" e_stop="44377"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="1.000" e_score="0.991"/>
          <exon-intron don_prob="0.999" acc_prob="0.784" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="47043" e_stop="46927" e_length="117"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="46926" i_stop="46861" i_length="66"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="46860" e_stop="46724" e_length="137"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.784">
            <gDNA_intron_boundary i_start="46723" i_stop="46276" i_length="448"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="46275" e_stop="46036" e_length="240"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="46035" i_stop="44906" i_length="1130"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="44905" e_stop="44377" e_length="529"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47043" stop="46927"/>
              <exon start="46860" stop="46724"/>
              <exon start="46275" stop="46040"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253438" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46860" stop="46724"/>
              <exon start="46275" stop="46036"/>
              <exon start="44905" stop="44801"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305045" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46858" stop="46724"/>
              <exon start="46275" stop="46036"/>
              <exon start="44905" stop="44455"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704716" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44905" stop="44410"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712774" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44863" stop="44391"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712125" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44858" stop="44382"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219978" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44752" stop="44391"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353979" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44742" stop="44382"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219738" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44718" stop="44377"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224406" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44634" stop="44387"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308350" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTTTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCAT : GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAG : GTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAAAGATAACGATAAGCTCAAATCTGAG : GTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTTATTCTCTTGATTTA</gDNA_template>
            <first_frame> Y  K  L  F  Q  I  D  S  F  K  F  N  S  L  R  V  L  F  L  *  I  D  Y  L  *  Y  S  K  N  N  D  K  I  V  T  T  F  L  H  :  D  Q  D  R  R  *  *  R  W  R  T  P  R  R  G  D  P  S  L  A  R  R  R  I  Y  M  T  R  N  T  T  T  S  S  H  R  R  R  S  A  V  S  L  L  S  R :   C  T  C  W  R  R  A  L  R  Q  K  T  S  W  S  P  S  A  K  P  S  W  P  K  S  W  G  C  S  P  D  R  W  L  Y  G  S  K  T  A  V  P  G  G  R  P  S  S  S  R  G  I  M  I  S  S  N  P  L  M  T  P  F  S  L  I  L  T  P  F  A  K  I  T  I  S  S  N  L  R :   L  F  H  *  W  K  S  Y  R  G  K  W  L  E  E  Q  G  E  M  K  N  L  T  S  W  R  W  M  L  *  R  S  F  K  *  R  *  R  L  R  T  G  *  A  V  A  V  V  G  A  R  W  *  M  S  I  V  H  S  W  W  T  V  G  T  H  I  F  T  L  I  M  R  S  I  Q  G  L  E  D  A  M  F  L  H  P  W  M  V  Y  N  R  R  K  M  M  V  V  M  I  M  A  V  A  M  A  T  S  L  T  S  L  W  Q  K  S  S  T  M  N  K  E  K  S  L  L  D  G  S  G  L  N  *  I  L  E  Y  Y  I  T  V  F  L  I  Y  A  R  F  V  *  *  N  K  C  R  N  S  N  F  L  F  K  H  L  L  I  C  F  C  S  F  Y  S  L  D  L </first_frame>
            <second_frame>  I  S  C  F  R  *  I  V  L  N  S  I  H  L  G  Y  C  F  Y  R  L  I  I  S  S  T  V  K  I  M  I  K  L  *  Q  P  F  C  M :   T  K  I  D  D  D  E  D  G  G  L  L  E  E  A  T  L  L  *  L  A  G  G  S  I  *  R  G  I  L  R  R  A  V  T  G  E  E  A  P  S  H  S  *  A   : G  A  L  V  G  E  E  L  *  D  R  K  Q  A  G  A  R  A  Q  N  P  A  G  Q  K  A  G  A  A  A  Q  T  G  G  C  M  V  P  K  P  P  C  P  V  E  D  Q  A  A  R  E  G  L  *  S  A  Q  I  L  L  *  L  P  S  L  *  F  *  L  R  S  Q  R  *  R  *  A  Q  I  *   : G  C  F  I  D  G  K  V  T  G  E  S  G  W  R  S  R  G  K  *  K  I  *  H  L  G  G  G  C  Y  D  D  P  S  S  E  G  E  G  *  G  P  V  E  Q  W  Q  W  W  E  R  G  G  R  *  A  *  S  T  A  G  G  Q  W  G  L  I  F  S  H  *  S  *  G  V  S  R  A  W  R  M  Q  C  S  S  T  H  G  W  F  T  I  G  G  R  *  W  *  *  *  S  W  Q  L  P  W  L  L  L  *  R  L  C  G  R  R  A  A  P  *  T  R  R  R  A  Y  W  M  V  L  V  L  I  E  F  *  N  I  I  L  Q  F  F  L  S  T  R  A  L  Y  D  E  I  S  V  V  I  P  T  S  Y  L  N  I  Y  *  Y  A  F  A  A  F  I  L  L  I   </second_frame>
            <third_frame>   *  V  V  S  D  R  *  F  *  I  Q  F  T  *  G  I  V  F  I  D  *  L  S  L  V  Q  *  K  *  *  *  N  C  N  N  L  F  A   : *  P  R  S  T  M  M  K  M  E  D  S  S  K  R  R  P  F  F  S  S  P  E  D  L  Y  D  E  E  Y  Y  D  E  Q  S  P  E  K  K  R  R  L  T  P  E  Q  :  V  H  L  L  E  K  S  F  E  T  E  N  K  L  E  P  E  R  K  T  Q  L  A  K  K  L  G  L  Q  P  R  Q  V  A  V  W  F  Q  N  R  R  A  R  W  K  T  K  Q  L  E  R  D  Y  D  Q  L  K  S  S  Y  D  S  L  L  S  D  F  D  S  V  R  K  D  N  D  K  L  K  S  E  :  V  V  S  L  M  E  K  L  Q  G  K  V  V  G  G  A  G  G  N  E  K  S  D  I  L  E  V  D  A  M  T  I  L  Q  V  K  V  K  A  E  D  R  L  S  S  G  S  G  G  S  A  V  V  D  E  H  S  P  Q  L  V  D  S  G  D  S  Y  F  H  T  D  H  E  E  Y  P  G  P  G  G  C  N  V  P  P  P  M  D  G  L  Q  S  E  E  D  D  G  S  D  D  H  G  S  C  H  G  Y  F  S  N  V  F  V  A  E  E  Q  H  H  E  Q  G  E  E  P  I  G  W  F  W  S  *  L  N  F  R  I  L  Y  Y  S  F  S  Y  L  R  A  L  C  M  M  K  *  V  S  *  F  Q  L  L  I  *  T  S  I  N  M  L  L  Q  L  L  F  S  *  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46858" stop="46724"/>
                    <exon start="46275" stop="46036"/>
                    <exon start="44905" stop="44510"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>768</number_coding_nucleotides>
                  <number_encoded_amino_acids>256</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PRSTMMKMEDSSKRRPFFSSPEDLYDEEYYDEQSPEKKRRLTPEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDQLKSSYDSLLSDFDSVRKDNDKLKSEVVSLMEKLQGKVVGGAGGNEKSDILEVDAMTILQVKVKAEDRLSSGSGGSAVVDEHSPQLVDSGDSYFHTDHEEYPGPGGCNVPPPMDGLQSEEDDGSDDHGSCHGYFSNVFVAEEQHHEQGEEPIGWFWS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="63769" PGL_stop="67268"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="63769" e_stop="64131"/>
            <exon e_start="64448" e_stop="64738"/>
            <exon e_start="64848" e_stop="65047"/>
            <exon e_start="65668" e_stop="65936"/>
            <exon e_start="66322" e_stop="66464"/>
            <exon e_start="66990" e_stop="67061"/>
            <exon e_start="67164" e_stop="67268"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.879" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.968" e_score="1.000"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="63769" e_stop="64131" e_length="363"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.969">
            <gDNA_intron_boundary i_start="64132" i_stop="64447" i_length="316"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="64448" e_stop="64738" e_length="291"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.990">
            <gDNA_intron_boundary i_start="64739" i_stop="64847" i_length="109"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="64848" e_stop="65047" e_length="200"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.879">
            <gDNA_intron_boundary i_start="65048" i_stop="65667" i_length="620"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="65668" e_stop="65936" e_length="269"/>
          </exon>
          <intron i_serial="4" don_prob="0.971" acc_prob="1.000">
            <gDNA_intron_boundary i_start="65937" i_stop="66321" i_length="385"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="66322" e_stop="66464" e_length="143"/>
          </exon>
          <intron i_serial="5" don_prob="0.993" acc_prob="0.991">
            <gDNA_intron_boundary i_start="66465" i_stop="66989" i_length="525"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="66990" e_stop="67061" e_length="72"/>
          </exon>
          <intron i_serial="6" don_prob="0.987" acc_prob="0.968">
            <gDNA_intron_boundary i_start="67062" i_stop="67163" i_length="102"/>
          </intron>
          <exon e_serial="7" e_score="0.990">
            <gDNA_exon_boundary e_start="67164" e_stop="67268" e_length="105"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63769" stop="64131"/>
              <exon start="64448" stop="64641"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318321" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63842" stop="64131"/>
              <exon start="64448" stop="64703"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288511" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63858" stop="64131"/>
              <exon start="64448" stop="64699"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335873" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63870" stop="64131"/>
              <exon start="64448" stop="64720"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725499" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63890" stop="64131"/>
              <exon start="64448" stop="64738"/>
              <exon start="64848" stop="64951"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E320309" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63890" stop="64131"/>
              <exon start="64448" stop="64738"/>
              <exon start="64848" stop="64872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366821" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63891" stop="64131"/>
              <exon start="64448" stop="64738"/>
              <exon start="64848" stop="65043"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731269" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63897" stop="64131"/>
              <exon start="64448" stop="64738"/>
              <exon start="64848" stop="65036"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63897" stop="64131"/>
              <exon start="64448" stop="64738"/>
              <exon start="64848" stop="64889"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339835" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63902" stop="64131"/>
              <exon start="64448" stop="64738"/>
              <exon start="64848" stop="65036"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342959" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63902" stop="64131"/>
              <exon start="64448" stop="64738"/>
              <exon start="64848" stop="64870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366126" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63912" stop="64131"/>
              <exon start="64448" stop="64652"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725405" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63913" stop="64131"/>
              <exon start="64448" stop="64689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279300" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63915" stop="64131"/>
              <exon start="64448" stop="64738"/>
              <exon start="64848" stop="64929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728790" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63987" stop="64131"/>
              <exon start="64448" stop="64738"/>
              <exon start="64848" stop="65047"/>
              <exon start="65668" stop="65875"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E739588" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63988" stop="64131"/>
              <exon start="64448" stop="64738"/>
              <exon start="64848" stop="65047"/>
              <exon start="65668" stop="65867"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E739084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64609" stop="64738"/>
              <exon start="64848" stop="65047"/>
              <exon start="65668" stop="65866"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202299" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65788" stop="65936"/>
              <exon start="66322" stop="66464"/>
              <exon start="66990" stop="67061"/>
              <exon start="67164" stop="67268"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287750" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTGGTATTCCAATTTTATCCTTATCTCTTTCTACTCTCCTCCTGTCCATTACACCTATTTTCAATCTCAATTTCTTCATTAATAACAGTTGCATTTTGTCAATTTTTTTCCCTCCAAACCCCAAATGTCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAG : AAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGA : AATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACCTTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACGCTATTGAATTGCTAAACAAACTAGAAGCTGGGTTAGGTGAGCTTCAACAAATTGTTGAAGACAGGACTCGAGATGCTGTTGCACCTAAACAGAAGGAATTGCTTAACTATGTTGGAGG : CTGAGATCTTCCTGGGGCATTCGATTTCTGCAGTGTTGAAGAGGATATGGTGGATGGATTCCCATATGAAGTACCTGAAGAATATCAAAATATGCCTTTACTGAAGGGAAGAGCAACTGTGGATATGAAGGTCAAAGTCAAAGACAATCCCAACCTGGAGGAATGCGTATTTCGTATTGTTCTAGATGGATATAATGCTCCAGTTACTGCTGGAAATTTTATAGACTTGGTCGAGAGGCATTTCTATGATGGCATGGATATTCAAAGAG : CGGATGGATTTGTGGTACAAACAGGAGATCCTGAAGGTCCAGCTGAAGGTTTTATTGACCCCAGTACAGAGAAAACCCGGACAGTACCTCTAGAGATTATGGTGGTTGGTGAAAAAGCACCATTCTACGGAGAAACTTTGGAA : GATCTTGGTCTATACAAGGCTCAAACAAGACTACCTTTCAATGCTTTTGGAACAATGGCCATGGCTAGAGAA : GAATTTGAGAATAACTCTGCCTCAAGTCAGGTGTTTTGGTTGTTGAAAGAAAGTGAACTGACTCCTAGCAACGCCAATATATTGGATGGTCGATATGCTGTGTTT</gDNA_template>
            <first_frame> S  G  I  P  I  L  S  L  S  L  S  T  L  L  L  S  I  T  P  I  F  N  L  N  F  F  I  N  N  S  C  I  L  S  I  F  F  P  P  N  P  K  C  P  L  E  L  L  D  C  V  N  K  L  V  V  N  S  S  M  A  A  S  V  S  C  H  Y  F  S  S  P  L  T  T  S  T  K  S  I  K  P  K  L  N  Y  S  H  F  A  P  A  L  S  K  G  S  I  R  H  F  V  P  L  C  S  S  Q  R  S  L  P  S  E  S  E  C  Q  D  K  E  :  K  D  W  F  L  S  L  K  K  C  A  A  A  V  A  L  S  V  S  L  I  S  G  L  P  G  S  Q  W  L  G  P  A  H  A  S  T  P  A  L  P  D  V  S  V  L  I  S  G  P  P  I  K  D  P  G  A  L  L  R  Y  A  L  P  I  D  N  K  A  I  R  E  V  Q  K  P  L  E  D  I  T  D  S  L  K  I  A  G  V  K  A  L  D  S  V  E  R  :  N  T  R  Q  A  S  R  A  L  K  E  G  K  T  L  I  I  S  G  V  A  K  S  K  T  D  H  A  I  E  L  L  N  K  L  E  A  G  L  G  E  L  Q  Q  I  V  E  D  R  T  R  D  A  V  A  P  K  Q  K  E  L  L  N  Y  V  G  G :   *  D  L  P  G  A  F  D  F  C  S  V  E  E  D  M  V  D  G  F  P  Y  E  V  P  E  E  Y  Q  N  M  P  L  L  K  G  R  A  T  V  D  M  K  V  K  V  K  D  N  P  N  L  E  E  C  V  F  R  I  V  L  D  G  Y  N  A  P  V  T  A  G  N  F  I  D  L  V  E  R  H  F  Y  D  G  M  D  I  Q  R   : A  D  G  F  V  V  Q  T  G  D  P  E  G  P  A  E  G  F  I  D  P  S  T  E  K  T  R  T  V  P  L  E  I  M  V  V  G  E  K  A  P  F  Y  G  E  T  L  E  :  D  L  G  L  Y  K  A  Q  T  R  L  P  F  N  A  F  G  T  M  A  M  A  R  E  :  E  F  E  N  N  S  A  S  S  Q  V  F  W  L  L  K  E  S  E  L  T  P  S  N  A  N  I  L  D  G  R  Y  A  V  F </first_frame>
            <second_frame>  L  V  F  Q  F  Y  P  Y  L  F  L  L  S  S  C  P  L  H  L  F  S  I  S  I  S  S  L  I  T  V  A  F  C  Q  F  F  S  L  Q  T  P  N  V  L  *  N  C  L  T  V  *  T  N  *  L  *  I  H  Q  W  Q  H  L  F  P  A  T  I  F  L  P  H  *  Q  L  P  P  N  P  S  S  L  S  S  I  T  A  I  S  H  L  L  L  V  K  D  R  S  A  I  L  F  H  Y  V  L  H  N  A  R  F  L  L  N  R  N  A  K  T  K  R :   K  I  G  F  C  H  *  R  N  V  Q  L  Q  *  H  C  R  L  V  *  L  V  D  Y  L  D  R  N  G  W  V  L  L  M  R  A  P  Q  H  C  Q  M  S  L  Y  *  S  Q  G  H  Q  L  R  I  Q  G  R  Y  *  G  M  H  C  L  *  T  T  R  R  *  E  K  S  K  N  P  L  K  I  L  L  I  V  S  R  L  L  V  S  R  R  L  T  L  L  K  E :   I  Q  D  K  H  L  E  L  S  R  K  G  K  P  *  L  F  Q  E  *  L  S  Q  R  L  T  T  L  L  N  C  *  T  N  *  K  L  G  *  V  S  F  N  K  L  L  K  T  G  L  E  M  L  L  H  L  N  R  R  N  C  L  T  M  L  E   : A  E  I  F  L  G  H  S  I  S  A  V  L  K  R  I  W  W  M  D  S  H  M  K  Y  L  K  N  I  K  I  C  L  Y  *  R  E  E  Q  L  W  I  *  R  S  K  S  K  T  I  P  T  W  R  N  A  Y  F  V  L  F  *  M  D  I  M  L  Q  L  L  L  E  I  L  *  T  W  S  R  G  I  S  M  M  A  W  I  F  K  E  :  R  M  D  L  W  Y  K  Q  E  I  L  K  V  Q  L  K  V  L  L  T  P  V  Q  R  K  P  G  Q  Y  L  *  R  L  W  W  L  V  K  K  H  H  S  T  E  K  L  W  K :   I  L  V  Y  T  R  L  K  Q  D  Y  L  S  M  L  L  E  Q  W  P  W  L  E  K :   N  L  R  I  T  L  P  Q  V  R  C  F  G  C  *  K  K  V  N  *  L  L  A  T  P  I  Y  W  M  V  D  M  L  C   </second_frame>
            <third_frame>   W  Y  S  N  F  I  L  I  S  F  Y  S  P  P  V  H  Y  T  Y  F  Q  S  Q  F  L  H  *  *  Q  L  H  F  V  N  F  F  P  S  K  P  Q  M  S  S  R  I  A  *  L  C  K  Q  T  S  C  K  F  I  N  G  S  I  C  F  L  P  L  F  F  F  P  I  N  N  F  H  Q  I  H  Q  A  *  A  Q  L  Q  P  F  R  T  C  S  *  *  R  I  D  P  P  F  C  S  T  M  F  F  T  T  L  A  S  F  *  I  G  M  P  R  Q  R   : E  R  L  V  F  V  I  E  E  M  C  S  C  S  S  I  V  G  *  F  D  *  W  T  T  W  I  A  M  V  G  S  C  S  C  E  H  P  S  I  A  R  C  L  C  I  D  L  R  A  T  N  *  G  S  R  G  V  I  E  V  C  I  A  Y  R  Q  Q  G  D  K  R  S  P  K  T  P  *  R  Y  Y  *  *  S  Q  D  C  W  C  Q  G  A  *  L  C  *  K   : K  Y  K  T  S  I  S  S  S  Q  G  R  E  N  L  D  Y  F  R  S  S  *  V  K  D  *  P  R  Y  *  I  A  K  Q  T  R  S  W  V  R  *  A  S  T  N  C  *  R  Q  D  S  R  C  C  C  T  *  T  E  G  I  A  *  L  C  W  R  :  L  R  S  S  W  G  I  R  F  L  Q  C  *  R  G  Y  G  G  W  I  P  I  *  S  T  *  R  I  S  K  Y  A  F  T  E  G  K  S  N  C  G  Y  E  G  Q  S  Q  R  Q  S  Q  P  G  G  M  R  I  S  Y  C  S  R  W  I  *  C  S  S  Y  C  W  K  F  Y  R  L  G  R  E  A  F  L  *  W  H  G  Y  S  K  S :   G  W  I  C  G  T  N  R  R  S  *  R  S  S  *  R  F  Y  *  P  Q  Y  R  E  N  P  D  S  T  S  R  D  Y  G  G  W  *  K  S  T  I  L  R  R  N  F  G   : R  S  W  S  I  Q  G  S  N  K  T  T  F  Q  C  F  W  N  N  G  H  G  *  R   : R  I  *  E  *  L  C  L  K  S  G  V  L  V  V  E  R  K  *  T  D  S  *  Q  R  Q  Y  I  G  W  S  I  C  C  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="63769" stop="64131"/>
                    <exon start="64448" stop="64738"/>
                    <exon start="64848" stop="65047"/>
                    <exon start="65668" stop="65671"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>855</number_coding_nucleotides>
                  <number_encoded_amino_acids>285</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SGIPILSLSLSTLLLSITPIFNLNFFINNSCILSIFFPPNPKCPLELLDCVNKLVVNSSMAASVSCHYFSSPLTTSTKSIKPKLNYSHFAPALSKGSIRHFVPLCSSQRSLPSESECQDKEKDWFLSLKKCAAAVALSVSLISGLPGSQWLGPAHASTPALPDVSVLISGPPIKDPGALLRYALPIDNKAIREVQKPLEDITDSLKIAGVKALDSVERNTRQASRALKEGKTLIISGVAKSKTDHAIELLNKLEAGLGELQQIVEDRTRDAVAPKQKELLNYVGG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65672" stop="65936"/>
                    <exon start="66322" stop="66464"/>
                    <exon start="66990" stop="67061"/>
                    <exon start="67164" stop="67268"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>585</number_coding_nucleotides>
                  <number_encoded_amino_acids>195</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DLPGAFDFCSVEEDMVDGFPYEVPEEYQNMPLLKGRATVDMKVKVKDNPNLEECVFRIVLDGYNAPVTAGNFIDLVERHFYDGMDIQRADGFVVQTGDPEGPAEGFIDPSTEKTRTVPLEIMVVGEKAPFYGETLEDLGLYKAQTRLPFNAFGTMAMAREEFENNSASSQVFWLLKESELTPSNANILDGRYAVF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="63769" e_stop="64131"/>
            <exon e_start="64448" e_stop="64738"/>
            <exon e_start="64848" e_stop="65047"/>
            <exon e_start="65701" e_stop="65776"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.910" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="63769" e_stop="64131" e_length="363"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.969">
            <gDNA_intron_boundary i_start="64132" i_stop="64447" i_length="316"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="64448" e_stop="64738" e_length="291"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.990">
            <gDNA_intron_boundary i_start="64739" i_stop="64847" i_length="109"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="64848" e_stop="65047" e_length="200"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.910">
            <gDNA_intron_boundary i_start="65048" i_stop="65700" i_length="653"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="65701" e_stop="65776" e_length="76"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63769" stop="64131"/>
              <exon start="64448" stop="64641"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318321" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63835" stop="64131"/>
              <exon start="64448" stop="64738"/>
              <exon start="64848" stop="65047"/>
              <exon start="65701" stop="65772"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707272" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63842" stop="64131"/>
              <exon start="64448" stop="64703"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288511" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63858" stop="64131"/>
              <exon start="64448" stop="64699"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335873" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63870" stop="64131"/>
              <exon start="64448" stop="64720"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725499" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63890" stop="64131"/>
              <exon start="64448" stop="64738"/>
              <exon start="64848" stop="64951"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E320309" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63890" stop="64131"/>
              <exon start="64448" stop="64738"/>
              <exon start="64848" stop="64872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366821" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63891" stop="64131"/>
              <exon start="64448" stop="64738"/>
              <exon start="64848" stop="65043"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731269" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63894" stop="64131"/>
              <exon start="64448" stop="64738"/>
              <exon start="64848" stop="65047"/>
              <exon start="65701" stop="65776"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736433" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63897" stop="64131"/>
              <exon start="64448" stop="64738"/>
              <exon start="64848" stop="65036"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63897" stop="64131"/>
              <exon start="64448" stop="64738"/>
              <exon start="64848" stop="64889"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339835" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63902" stop="64131"/>
              <exon start="64448" stop="64738"/>
              <exon start="64848" stop="65036"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342959" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63902" stop="64131"/>
              <exon start="64448" stop="64738"/>
              <exon start="64848" stop="64870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366126" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63912" stop="64131"/>
              <exon start="64448" stop="64652"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725405" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63913" stop="64131"/>
              <exon start="64448" stop="64689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279300" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63915" stop="64131"/>
              <exon start="64448" stop="64738"/>
              <exon start="64848" stop="64929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728790" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTGGTATTCCAATTTTATCCTTATCTCTTTCTACTCTCCTCCTGTCCATTACACCTATTTTCAATCTCAATTTCTTCATTAATAACAGTTGCATTTTGTCAATTTTTTTCCCTCCAAACCCCAAATGTCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAG : AAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGA : AATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACCTTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACGCTATTGAATTGCTAAACAAACTAGAAGCTGGGTTAGGTGAGCTTCAACAAATTGTTGAAGACAGGACTCGAGATGCTGTTGCACCTAAACAGAAGGAATTGCTTAACTATGTTGGAGG : TGTTGAAGAGGATATGGTGGATGGATTCCCATATGAAGTACCTGAAGAATATCAAAATATGCCTTTACTGAAGGGA</gDNA_template>
            <first_frame> S  G  I  P  I  L  S  L  S  L  S  T  L  L  L  S  I  T  P  I  F  N  L  N  F  F  I  N  N  S  C  I  L  S  I  F  F  P  P  N  P  K  C  P  L  E  L  L  D  C  V  N  K  L  V  V  N  S  S  M  A  A  S  V  S  C  H  Y  F  S  S  P  L  T  T  S  T  K  S  I  K  P  K  L  N  Y  S  H  F  A  P  A  L  S  K  G  S  I  R  H  F  V  P  L  C  S  S  Q  R  S  L  P  S  E  S  E  C  Q  D  K  E  :  K  D  W  F  L  S  L  K  K  C  A  A  A  V  A  L  S  V  S  L  I  S  G  L  P  G  S  Q  W  L  G  P  A  H  A  S  T  P  A  L  P  D  V  S  V  L  I  S  G  P  P  I  K  D  P  G  A  L  L  R  Y  A  L  P  I  D  N  K  A  I  R  E  V  Q  K  P  L  E  D  I  T  D  S  L  K  I  A  G  V  K  A  L  D  S  V  E  R  :  N  T  R  Q  A  S  R  A  L  K  E  G  K  T  L  I  I  S  G  V  A  K  S  K  T  D  H  A  I  E  L  L  N  K  L  E  A  G  L  G  E  L  Q  Q  I  V  E  D  R  T  R  D  A  V  A  P  K  Q  K  E  L  L  N  Y  V  G  G :   V  E  E  D  M  V  D  G  F  P  Y  E  V  P  E  E  Y  Q  N  M  P  L  L  K  G </first_frame>
            <second_frame>  L  V  F  Q  F  Y  P  Y  L  F  L  L  S  S  C  P  L  H  L  F  S  I  S  I  S  S  L  I  T  V  A  F  C  Q  F  F  S  L  Q  T  P  N  V  L  *  N  C  L  T  V  *  T  N  *  L  *  I  H  Q  W  Q  H  L  F  P  A  T  I  F  L  P  H  *  Q  L  P  P  N  P  S  S  L  S  S  I  T  A  I  S  H  L  L  L  V  K  D  R  S  A  I  L  F  H  Y  V  L  H  N  A  R  F  L  L  N  R  N  A  K  T  K  R :   K  I  G  F  C  H  *  R  N  V  Q  L  Q  *  H  C  R  L  V  *  L  V  D  Y  L  D  R  N  G  W  V  L  L  M  R  A  P  Q  H  C  Q  M  S  L  Y  *  S  Q  G  H  Q  L  R  I  Q  G  R  Y  *  G  M  H  C  L  *  T  T  R  R  *  E  K  S  K  N  P  L  K  I  L  L  I  V  S  R  L  L  V  S  R  R  L  T  L  L  K  E :   I  Q  D  K  H  L  E  L  S  R  K  G  K  P  *  L  F  Q  E  *  L  S  Q  R  L  T  T  L  L  N  C  *  T  N  *  K  L  G  *  V  S  F  N  K  L  L  K  T  G  L  E  M  L  L  H  L  N  R  R  N  C  L  T  M  L  E   : V  L  K  R  I  W  W  M  D  S  H  M  K  Y  L  K  N  I  K  I  C  L  Y  *  R   </second_frame>
            <third_frame>   W  Y  S  N  F  I  L  I  S  F  Y  S  P  P  V  H  Y  T  Y  F  Q  S  Q  F  L  H  *  *  Q  L  H  F  V  N  F  F  P  S  K  P  Q  M  S  S  R  I  A  *  L  C  K  Q  T  S  C  K  F  I  N  G  S  I  C  F  L  P  L  F  F  F  P  I  N  N  F  H  Q  I  H  Q  A  *  A  Q  L  Q  P  F  R  T  C  S  *  *  R  I  D  P  P  F  C  S  T  M  F  F  T  T  L  A  S  F  *  I  G  M  P  R  Q  R   : E  R  L  V  F  V  I  E  E  M  C  S  C  S  S  I  V  G  *  F  D  *  W  T  T  W  I  A  M  V  G  S  C  S  C  E  H  P  S  I  A  R  C  L  C  I  D  L  R  A  T  N  *  G  S  R  G  V  I  E  V  C  I  A  Y  R  Q  Q  G  D  K  R  S  P  K  T  P  *  R  Y  Y  *  *  S  Q  D  C  W  C  Q  G  A  *  L  C  *  K   : K  Y  K  T  S  I  S  S  S  Q  G  R  E  N  L  D  Y  F  R  S  S  *  V  K  D  *  P  R  Y  *  I  A  K  Q  T  R  S  W  V  R  *  A  S  T  N  C  *  R  Q  D  S  R  C  C  C  T  *  T  E  G  I  A  *  L  C  W  R  :  C  *  R  G  Y  G  G  W  I  P  I  *  S  T  *  R  I  S  K  Y  A  F  T  E  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="63769" stop="64131"/>
                    <exon start="64448" stop="64738"/>
                    <exon start="64848" stop="65047"/>
                    <exon start="65701" stop="65776"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>930</number_coding_nucleotides>
                  <number_encoded_amino_acids>310</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SGIPILSLSLSTLLLSITPIFNLNFFINNSCILSIFFPPNPKCPLELLDCVNKLVVNSSMAASVSCHYFSSPLTTSTKSIKPKLNYSHFAPALSKGSIRHFVPLCSSQRSLPSESECQDKEKDWFLSLKKCAAAVALSVSLISGLPGSQWLGPAHASTPALPDVSVLISGPPIKDPGALLRYALPIDNKAIREVQKPLEDITDSLKIAGVKALDSVERNTRQASRALKEGKTLIISGVAKSKTDHAIELLNKLEAGLGELQQIVEDRTRDAVAPKQKELLNYVGGVEEDMVDGFPYEVPEEYQNMPLLKG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="66014" PGL_stop="65436"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="66014" e_stop="65822"/>
            <exon e_start="65741" e_stop="65436"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.794" acc_prob="0.917" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="66014" e_stop="65822" e_length="193"/>
          </exon>
          <intron i_serial="1" don_prob="0.794" acc_prob="0.917">
            <gDNA_intron_boundary i_start="65821" i_stop="65742" i_length="80"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="65741" e_stop="65436" e_length="306"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66014" stop="65822"/>
              <exon start="65741" stop="65436"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243184" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACATTCCTTGTTTGATGCATAGACAGTTTTATTTGTTTCATTGATTCGCAAGAACAGAGCAAAAATCATAAGCTCACCTCTTTGAATATCCATGCCATCATAGAAATGCCTCTCGACCAAGTCTATAAAATTTCCAGCAGTAACTGGAGCATTATATCCATCTAGAACAATACGAAATACGCATTCCTCCAG : GTACTTCATATGGGAATCCATCCACCATATCCTCTTCAACACTGCAGAAATCGAATGCCCCAGGAAGATCTCAGCTGCAGTCAATGACAAGGGGTCTAAATGAGAAAGGCATAACTTTGGAAATTCACCATTTTTAAAAGTTTTCATCACTCTTCACTTTCTATTCATAGAATTGGTCCATAGTCAACAAAAAATCTTATTTTGGTATTCAAACTGGAATAAGTAGCCTACTTAAACATGCATCCGTCCAATGACACTTCTGTGCTTCTGTGGCATAAATTCTACCAAAGCAATTGCTTTGTGAAA</gDNA_template>
            <first_frame> N  I  P  C  L  M  H  R  Q  F  Y  L  F  H  *  F  A  R  T  E  Q  K  S  *  A  H  L  F  E  Y  P  C  H  H  R  N  A  S  R  P  S  L  *  N  F  Q  Q  *  L  E  H  Y  I  H  L  E  Q  Y  E  I  R  I  P  P   : G  T  S  Y  G  N  P  S  T  I  S  S  S  T  L  Q  K  S  N  A  P  G  R  S  Q  L  Q  S  M  T  R  G  L  N  E  K  G  I  T  L  E  I  H  H  F  *  K  F  S  S  L  F  T  F  Y  S  *  N  W  S  I  V  N  K  K  S  Y  F  G  I  Q  T  G  I  S  S  L  L  K  H  A  S  V  Q  *  H  F  C  A  S  V  A  *  I  L  P  K  Q  L  L  C  E  </first_frame>
            <second_frame>  T  F  L  V  *  C  I  D  S  F  I  C  F  I  D  S  Q  E  Q  S  K  N  H  K  L  T  S  L  N  I  H  A  I  I  E  M  P  L  D  Q  V  Y  K  I  S  S  S  N  W  S  I  I  S  I  *  N  N  T  K  Y  A  F  L  Q  :  V  L  H  M  G  I  H  P  P  Y  P  L  Q  H  C  R  N  R  M  P  Q  E  D  L  S  C  S  Q  *  Q  G  V  *  M  R  K  A  *  L  W  K  F  T  I  F  K  S  F  H  H  S  S  L  S  I  H  R  I  G  P  *  S  T  K  N  L  I  L  V  F  K  L  E  *  V  A  Y  L  N  M  H  P  S  N  D  T  S  V  L  L  W  H  K  F  Y  Q  S  N  C  F  V  K </second_frame>
            <third_frame>   H  S  L  F  D  A  *  T  V  L  F  V  S  L  I  R  K  N  R  A  K  I  I  S  S  P  L  *  I  S  M  P  S  *  K  C  L  S  T  K  S  I  K  F  P  A  V  T  G  A  L  Y  P  S  R  T  I  R  N  T  H  S  S  R :   Y  F  I  W  E  S  I  H  H  I  L  F  N  T  A  E  I  E  C  P  R  K  I  S  A  A  V  N  D  K  G  S  K  *  E  R  H  N  F  G  N  S  P  F  L  K  V  F  I  T  L  H  F  L  F  I  E  L  V  H  S  Q  Q  K  I  L  F  W  Y  S  N  W  N  K  *  P  T  *  T  C  I  R  P  M  T  L  L  C  F  C  G  I  N  S  T  K  A  I  A  L  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0016A12.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="75402" PGL_stop="68052"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="75402" e_stop="75191"/>
            <exon e_start="75099" e_stop="74947"/>
            <exon e_start="73979" e_stop="73942"/>
            <exon e_start="73707" e_stop="73685"/>
            <exon e_start="72819" e_stop="72713"/>
            <exon e_start="72626" e_stop="72575"/>
            <exon e_start="72488" e_stop="72404"/>
            <exon e_start="71710" e_stop="71620"/>
            <exon e_start="70820" e_stop="70782"/>
            <exon e_start="70584" e_stop="70517"/>
            <exon e_start="70423" e_stop="70361"/>
            <exon e_start="70255" e_stop="70200"/>
            <exon e_start="70119" e_stop="70046"/>
            <exon e_start="69913" e_stop="69821"/>
            <exon e_start="69739" e_stop="69638"/>
            <exon e_start="69539" e_stop="69459"/>
            <exon e_start="69388" e_stop="69297"/>
            <exon e_start="69158" e_stop="69143"/>
            <exon e_start="69033" e_stop="68923"/>
            <exon e_start="68830" e_stop="68448"/>
            <exon e_start="68079" e_stop="68052"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.915" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.908" e_score="1.000"/>
          <exon-intron don_prob="0.864" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.938" e_score="1.000"/>
          <exon-intron don_prob="0.882" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.768" e_score="1.000"/>
          <exon-intron don_prob="0.822" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.939" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.255" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.873" acc_prob="0.993" e_score="0.961"/>
          <exon-intron don_prob="0.957" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.470" acc_prob="0.434" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.956" e_score="1.000"/>
          <exon-intron don_prob="0.408" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.786"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="75402" e_stop="75191" e_length="212"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="75190" i_stop="75100" i_length="91"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="75099" e_stop="74947" e_length="153"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.915">
            <gDNA_intron_boundary i_start="74946" i_stop="73980" i_length="967"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="73979" e_stop="73942" e_length="38"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.964">
            <gDNA_intron_boundary i_start="73941" i_stop="73708" i_length="234"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="73707" e_stop="73685" e_length="23"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.908">
            <gDNA_intron_boundary i_start="73684" i_stop="72820" i_length="865"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="72819" e_stop="72713" e_length="107"/>
          </exon>
          <intron i_serial="5" don_prob="0.864" acc_prob="0.996">
            <gDNA_intron_boundary i_start="72712" i_stop="72627" i_length="86"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="72626" e_stop="72575" e_length="52"/>
          </exon>
          <intron i_serial="6" don_prob="0.983" acc_prob="0.938">
            <gDNA_intron_boundary i_start="72574" i_stop="72489" i_length="86"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="72488" e_stop="72404" e_length="85"/>
          </exon>
          <intron i_serial="7" don_prob="0.882" acc_prob="1.000">
            <gDNA_intron_boundary i_start="72403" i_stop="71711" i_length="693"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="71710" e_stop="71620" e_length="91"/>
          </exon>
          <intron i_serial="8" don_prob="1.000" acc_prob="0.768">
            <gDNA_intron_boundary i_start="71619" i_stop="70821" i_length="799"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="70820" e_stop="70782" e_length="39"/>
          </exon>
          <intron i_serial="9" don_prob="0.822" acc_prob="0.979">
            <gDNA_intron_boundary i_start="70781" i_stop="70585" i_length="197"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="70584" e_stop="70517" e_length="68"/>
          </exon>
          <intron i_serial="10" don_prob="0.986" acc_prob="0.987">
            <gDNA_intron_boundary i_start="70516" i_stop="70424" i_length="93"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="70423" e_stop="70361" e_length="63"/>
          </exon>
          <intron i_serial="11" don_prob="0.939" acc_prob="0.976">
            <gDNA_intron_boundary i_start="70360" i_stop="70256" i_length="105"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="70255" e_stop="70200" e_length="56"/>
          </exon>
          <intron i_serial="12" don_prob="0.982" acc_prob="0.993">
            <gDNA_intron_boundary i_start="70199" i_stop="70120" i_length="80"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="70119" e_stop="70046" e_length="74"/>
          </exon>
          <intron i_serial="13" don_prob="0.961" acc_prob="0.999">
            <gDNA_intron_boundary i_start="70045" i_stop="69914" i_length="132"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="69913" e_stop="69821" e_length="93"/>
          </exon>
          <intron i_serial="14" don_prob="0.255" acc_prob="0.978">
            <gDNA_intron_boundary i_start="69820" i_stop="69740" i_length="81"/>
          </intron>
          <exon e_serial="15" e_score="0.961">
            <gDNA_exon_boundary e_start="69739" e_stop="69638" e_length="102"/>
          </exon>
          <intron i_serial="15" don_prob="0.873" acc_prob="0.993">
            <gDNA_intron_boundary i_start="69637" i_stop="69540" i_length="98"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="69539" e_stop="69459" e_length="81"/>
          </exon>
          <intron i_serial="16" don_prob="0.957" acc_prob="0.992">
            <gDNA_intron_boundary i_start="69458" i_stop="69389" i_length="70"/>
          </intron>
          <exon e_serial="17" e_score="1.000">
            <gDNA_exon_boundary e_start="69388" e_stop="69297" e_length="92"/>
          </exon>
          <intron i_serial="17" don_prob="0.470" acc_prob="0.434">
            <gDNA_intron_boundary i_start="69296" i_stop="69159" i_length="138"/>
          </intron>
          <exon e_serial="18" e_score="1.000">
            <gDNA_exon_boundary e_start="69158" e_stop="69143" e_length="16"/>
          </exon>
          <intron i_serial="18" don_prob="0.990" acc_prob="0.956">
            <gDNA_intron_boundary i_start="69142" i_stop="69034" i_length="109"/>
          </intron>
          <exon e_serial="19" e_score="1.000">
            <gDNA_exon_boundary e_start="69033" e_stop="68923" e_length="111"/>
          </exon>
          <intron i_serial="19" don_prob="0.408" acc_prob="0.976">
            <gDNA_intron_boundary i_start="68922" i_stop="68831" i_length="92"/>
          </intron>
          <exon e_serial="20" e_score="1.000">
            <gDNA_exon_boundary e_start="68830" e_stop="68448" e_length="383"/>
          </exon>
          <intron i_serial="20" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="68447" i_stop="68080" i_length="368"/>
          </intron>
          <exon e_serial="21" e_score="0.786">
            <gDNA_exon_boundary e_start="68079" e_stop="68052" e_length="28"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75402" stop="75191"/>
              <exon start="75099" stop="74947"/>
              <exon start="73979" stop="73942"/>
              <exon start="73707" stop="73685"/>
              <exon start="72819" stop="72713"/>
              <exon start="72626" stop="72575"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332503" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75220" stop="75191"/>
              <exon start="75099" stop="74947"/>
              <exon start="73979" stop="73942"/>
              <exon start="73707" stop="73685"/>
              <exon start="72819" stop="72765"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338725" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75051" stop="74947"/>
              <exon start="73979" stop="73942"/>
              <exon start="73707" stop="73685"/>
              <exon start="72819" stop="72713"/>
              <exon start="72626" stop="72575"/>
              <exon start="72488" stop="72404"/>
              <exon start="71710" stop="71620"/>
              <exon start="70820" stop="70782"/>
              <exon start="70584" stop="70517"/>
              <exon start="70423" stop="70361"/>
              <exon start="70255" stop="70200"/>
              <exon start="70119" stop="70054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548022" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70067" stop="70046"/>
              <exon start="69913" stop="69821"/>
              <exon start="69739" stop="69638"/>
              <exon start="69539" stop="69491"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288496" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69658" stop="69638"/>
              <exon start="69539" stop="69459"/>
              <exon start="69388" stop="69297"/>
              <exon start="69158" stop="69143"/>
              <exon start="69033" stop="68923"/>
              <exon start="68830" stop="68448"/>
              <exon start="68079" stop="68052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538230" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGCCTGTGTCGCTTGCTGCTGCAGCAATAGAACAGAAATTAAAAAAACGAGACATTTGATAATAGTAATTGAAATAAAGAGACTTTGACGGCACTACTATATCACTACTCACATTCTCCTTCCCATTTTCGTGCAAATCAAATATATTCTTCCTCCTACTCTACGCCAGCTGCTCTCCTCTCTCTTTCTCTCTCCTTTCGGCACCTCAAAAG : AGTGGTGAAGTAGAGAGCCCAAGGGTGAGTATGGGAGCTTTTTCAAATGAAGAACTTAGTTTCTCTTCCAATTTCGACTTCGCTTCCTCTCAGGATCTCAGATTCTCTAAGCAAATCCATGACAACGTTCACGGCAACATCTACATCGACCCG : CTCTACTTGAAGTTCATTGACACAGAACAATTTCAAAG : GCTTCGTGATCTTAAACAACTAG : GTGTGACACACATGGTCTATCCAGGAGCAGTGCATTCTAGATTTGAGCATTCCCTTGGAGTGTATTGGCTTGCCAATGAAGCTGTCCATAAGCTTAAAACCCACCAA : GGTATGGAGCTTGGAATTGATCACTTTGATATACAAACAGTGAAACTTGCAG : GTCTTCTACATGATATTGGACATGGACCTTTTAGCCACTTGTTTGAACGCGAGTTTCTTCCTCAAGTTTGCAATGGATTGGACTG : GTCTCATGAGCAAATGTCTGTGGACATGATTGATCACATTGTTGATGAGCGTCGTATTGATATTGATTCTGGAACCATTAAAAGGGTCAAG : GAAATGATACTTGCTAGTTCCAAGTTTACGTTGACAAAA : AGCTCAAGGGAGAAGCAGTTCTTATATGATATTGTGGCTAATGGTCGAAATGGAGTCGATGTTGACAA : GTTTGATTACATTGTCCGAGATAGCCGTGCGTGTGCAGTAGGATGCAATTTTCAATTTGAGAG : GTTGATGGAAACTATGAGAGTATTGGGAGATGAGATATGTTATCGAGCCAAAGATT : ATTTAACCATCCACAAGTTATTTGCCACACGAGCTGATCTACACAGAACTGTTTATACTCACGCTAAAGTGAAG : GCAATAGAGCTTATGATTGTAGATGCACTAGTGAAAGCAAATGATTATCTACACATATCATCACATATAGAGCATCCTTCTCAATACTGGAAG : TTAGATGACACCATTTTAAAAACCATCGAGACTGCTCCAGACCCGGAACTGAAGGAATCTAGGGATTTGATCCTTCGTGTCCGAAGGAGAGATTTGTACCAG : TTCTGTAATGAGTATGCTGTCCCAAGAGACAAAATAGAGCATTTCAAGGATGTCACGGCACATGATATTGTCTGTTCGCAG : AAAAGTAGCAGTGAGACACTTAATGAAGAGGATGTTGCTGTGACCAATGTCAGGATAGATCTGACACGCGGGAGGCATAATCCGCTTGAAAG : TATCCATTTTTTCAAG : GATTATGAAAGTGAGGAGAAGTTCTCTATACCTGATGATCGCATCAGCCACTTGCTGCCATCATCATATCAAGATATGATTGTGAGAGTCTACTCCAAAAAGCCCCACCTG : GTGGAAGCTATTTCTGATGCATTTGAAAATTTCCAGTTAAAGACTTATGGAATAAAAGCACAGGTTCATGCAACACCTGAGAAGAAAAAACGCCGTGTATGATATTTCCCCAGTCATCACTACAAAATCCACAGTAGATATATGTGATTATAGTATATCTCAAGCAACATATTACAGTCCATTTGTACAGAAGTCTTTAAATGACACGTGAAAGGCCTCTCAAGAGTTATACTAGAGTTTTTGTAGAAAGTTGCTACCATTTACTGGATATGATAATATCCTCCGAGTACTCTCAACAATTTCTTGTATCCTAGCATTACTCGAAAAATGGATTTCTTGGTATAACCGACTTCTGAATATTACAGAAGCTGATGCTTTTATAA : ATAAAAAGAAAAAAAAAAACAAATTGAA</gDNA_template>
            <first_frame> G  L  C  R  L  L  L  Q  Q  *  N  R  N  *  K  N  E  T  F  D  N  S  N  *  N  K  E  T  L  T  A  L  L  Y  H  Y  S  H  S  P  S  H  F  R  A  N  Q  I  Y  S  S  S  Y  S  T  P  A  A  L  L  S  L  S  L  S  F  R  H  L  K  R :   V  V  K  *  R  A  Q  G  *  V  W  E  L  F  Q  M  K  N  L  V  S  L  P  I  S  T  S  L  P  L  R  I  S  D  S  L  S  K  S  M  T  T  F  T  A  T  S  T  S  T  R :   S  T  *  S  S  L  T  Q  N  N  F  K   : G  F  V  I  L  N  N  *  :  V  *  H  T  W  S  I  Q  E  Q  C  I  L  D  L  S  I  P  L  E  C  I  G  L  P  M  K  L  S  I  S  L  K  P  T  K :   V  W  S  L  E  L  I  T  L  I  Y  K  Q  *  N  L  Q  :  V  F  Y  M  I  L  D  M  D  L  L  A  T  C  L  N  A  S  F  F  L  K  F  A  M  D  W  T   : G  L  M  S  K  C  L  W  T  *  L  I  T  L  L  M  S  V  V  L  I  L  I  L  E  P  L  K  G  S  R :   K  *  Y  L  L  V  P  S  L  R  *  Q  K :   A  Q  G  R  S  S  S  Y  M  I  L  W  L  M  V  E  M  E  S  M  L  T   : S  L  I  T  L  S  E  I  A  V  R  V  Q  *  D  A  I  F  N  L  R   : G  *  W  K  L  *  E  Y  W  E  M  R  Y  V  I  E  P  K  I  :  I  *  P  S  T  S  Y  L  P  H  E  L  I  Y  T  E  L  F  I  L  T  L  K  *  R :   Q  *  S  L  *  L  *  M  H  *  *  K  Q  M  I  I  Y  T  Y  H  H  I  *  S  I  L  L  N  T  G  S :   *  M  T  P  F  *  K  P  S  R  L  L  Q  T  R  N  *  R  N  L  G  I  *  S  F  V  S  E  G  E  I  C  T  S :   S  V  M  S  M  L  S  Q  E  T  K  *  S  I  S  R  M  S  R  H  M  I  L  S  V  R  R :   K  V  A  V  R  H  L  M  K  R  M  L  L  *  P  M  S  G  *  I  *  H  A  G  G  I  I  R  L  K   : V  S  I  F  S  R :   I  M  K  V  R  R  S  S  L  Y  L  M  I  A  S  A  T  C  C  H  H  H  I  K  I  *  L  *  E  S  T  P  K  S  P  T  W :   W  K  L  F  L  M  H  L  K  I  S  S  *  R  L  M  E  *  K  H  R  F  M  Q  H  L  R  R  K  N  A  V  Y  D  I  S  P  V  I  T  T  K  S  T  V  D  I  C  D  Y  S  I  S  Q  A  T  Y  Y  S  P  F  V  Q  K  S  L  N  D  T  *  K  A  S  Q  E  L  Y  *  S  F  C  R  K  L  L  P  F  T  G  Y  D  N  I  L  R  V  L  S  T  I  S  C  I  L  A  L  L  E  K  W  I  S  W  Y  N  R  L  L  N  I  T  E  A  D  A  F  I   : N  K  K  K  K  K  N  K  L   </first_frame>
            <second_frame>  A  C  V  A  C  C  C  S  N  R  T  E  I  K  K  T  R  H  L  I  I  V  I  E  I  K  R  L  *  R  H  Y  Y  I  T  T  H  I  L  L  P  I  F  V  Q  I  K  Y  I  L  P  P  T  L  R  Q  L  L  S  S  L  F  L  S  P  F  G  T  S  K   : E  W  *  S  R  E  P  K  G  E  Y  G  S  F  F  K  *  R  T  *  F  L  F  Q  F  R  L  R  F  L  S  G  S  Q  I  L  *  A  N  P  *  Q  R  S  R  Q  H  L  H  R  P   : A  L  L  E  V  H  *  H  R  T  I  S  K  :  A  S  *  S  *  T  T  R :   C  D  T  H  G  L  S  R  S  S  A  F  *  I  *  A  F  P  W  S  V  L  A  C  Q  *  S  C  P  *  A  *  N  P  P   : R  Y  G  A  W  N  *  S  L  *  Y  T  N  S  E  T  C  R :   S  S  T  *  Y  W  T  W  T  F  *  P  L  V  *  T  R  V  S  S  S  S  L  Q  W  I  G  L  :  V  S  *  A  N  V  C  G  H  D  *  S  H  C  *  *  A  S  Y  *  Y  *  F  W  N  H  *  K  G  Q   : G  N  D  T  C  *  F  Q  V  Y  V  D  K   : K  L  K  G  E  A  V  L  I  *  Y  C  G  *  W  S  K  W  S  R  C  *  Q  :  V  *  L  H  C  P  R  *  P  C  V  C  S  R  M  Q  F  S  I  *  E  :  V  D  G  N  Y  E  S  I  G  R  *  D  M  L  S  S  Q  R  L :   F  N  H  P  Q  V  I  C  H  T  S  *  S  T  Q  N  C  L  Y  S  R  *  S  E   : G  N  R  A  Y  D  C  R  C  T  S  E  S  K  *  L  S  T  H  I  I  T  Y  R  A  S  F  S  I  L  E   : V  R  *  H  H  F  K  N  H  R  D  C  S  R  P  G  T  E  G  I  *  G  F  D  P  S  C  P  K  E  R  F  V  P   : V  L  *  *  V  C  C  P  K  R  Q  N  R  A  F  Q  G  C  H  G  T  *  Y  C  L  F  A   : E  K  *  Q  *  D  T  *  *  R  G  C  C  C  D  Q  C  Q  D  R  S  D  T  R  E  A  *  S  A  *  K  :  Y  P  F  F  Q   : G  L  *  K  *  G  E  V  L  Y  T  *  *  S  H  Q  P  L  A  A  I  I  I  S  R  Y  D  C  E  S  L  L  Q  K  A  P  P   : G  G  S  Y  F  *  C  I  *  K  F  P  V  K  D  L  W  N  K  S  T  G  S  C  N  T  *  E  E  K  T  P  C  M  I  F  P  Q  S  S  L  Q  N  P  Q  *  I  Y  V  I  I  V  Y  L  K  Q  H  I  T  V  H  L  Y  R  S  L  *  M  T  R  E  R  P  L  K  S  Y  T  R  V  F  V  E  S  C  Y  H  L  L  D  M  I  I  S  S  E  Y  S  Q  Q  F  L  V  S  *  H  Y  S  K  N  G  F  L  G  I  T  D  F  *  I  L  Q  K  L  M  L  L  *  :  I  K  R  K  K  K  T  N  *  </second_frame>
            <third_frame>   P  V  S  L  A  A  A  A  I  E  Q  K  L  K  K  R  D  I  *  *  *  *  L  K  *  R  D  F  D  G  T  T  I  S  L  L  T  F  S  F  P  F  S  C  K  S  N  I  F  F  L  L  L  Y  A  S  C  S  P  L  S  F  S  L  L  S  A  P  Q  K  :  S  G  E  V  E  S  P  R  V  S  M  G  A  F  S  N  E  E  L  S  F  S  S  N  F  D  F  A  S  S  Q  D  L  R  F  S  K  Q  I  H  D  N  V  H  G  N  I  Y  I  D  P  :  L  Y  L  K  F  I  D  T  E  Q  F  Q  R :   L  R  D  L  K  Q  L   : G  V  T  H  M  V  Y  P  G  A  V  H  S  R  F  E  H  S  L  G  V  Y  W  L  A  N  E  A  V  H  K  L  K  T  H  Q  :  G  M  E  L  G  I  D  H  F  D  I  Q  T  V  K  L  A   : G  L  L  H  D  I  G  H  G  P  F  S  H  L  F  E  R  E  F  L  P  Q  V  C  N  G  L  D  W :   S  H  E  Q  M  S  V  D  M  I  D  H  I  V  D  E  R  R  I  D  I  D  S  G  T  I  K  R  V  K  :  E  M  I  L  A  S  S  K  F  T  L  T  K  :  S  S  R  E  K  Q  F  L  Y  D  I  V  A  N  G  R  N  G  V  D  V  D  K :   F  D  Y  I  V  R  D  S  R  A  C  A  V  G  C  N  F  Q  F  E  R :   L  M  E  T  M  R  V  L  G  D  E  I  C  Y  R  A  K  D   : Y  L  T  I  H  K  L  F  A  T  R  A  D  L  H  R  T  V  Y  T  H  A  K  V  K  :  A  I  E  L  M  I  V  D  A  L  V  K  A  N  D  Y  L  H  I  S  S  H  I  E  H  P  S  Q  Y  W  K  :  L  D  D  T  I  L  K  T  I  E  T  A  P  D  P  E  L  K  E  S  R  D  L  I  L  R  V  R  R  R  D  L  Y  Q  :  F  C  N  E  Y  A  V  P  R  D  K  I  E  H  F  K  D  V  T  A  H  D  I  V  C  S  Q  :  K  S  S  S  E  T  L  N  E  E  D  V  A  V  T  N  V  R  I  D  L  T  R  G  R  H  N  P  L  E  S :   I  H  F  F  K  :  D  Y  E  S  E  E  K  F  S  I  P  D  D  R  I  S  H  L  L  P  S  S  Y  Q  D  M  I  V  R  V  Y  S  K  K  P  H  L  :  V  E  A  I  S  D  A  F  E  N  F  Q  L  K  T  Y  G  I  K  A  Q  V  H  A  T  P  E  K  K  K  R  R  V  *  Y  F  P  S  H  H  Y  K  I  H  S  R  Y  M  *  L  *  Y  I  S  S  N  I  L  Q  S  I  C  T  E  V  F  K  *  H  V  K  G  L  S  R  V  I  L  E  F  L  *  K  V  A  T  I  Y  W  I  *  *  Y  P  P  S  T  L  N  N  F  L  Y  P  S  I  T  R  K  M  D  F  L  V  *  P  T  S  E  Y  Y  R  S  *  C  F  Y  K :   *  K  E  K  K  K  Q  I  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75325" stop="75191"/>
                    <exon start="75099" stop="74947"/>
                    <exon start="73979" stop="73942"/>
                    <exon start="73707" stop="73685"/>
                    <exon start="72819" stop="72713"/>
                    <exon start="72626" stop="72575"/>
                    <exon start="72488" stop="72404"/>
                    <exon start="71710" stop="71620"/>
                    <exon start="70820" stop="70782"/>
                    <exon start="70584" stop="70517"/>
                    <exon start="70423" stop="70361"/>
                    <exon start="70255" stop="70200"/>
                    <exon start="70119" stop="70046"/>
                    <exon start="69913" stop="69821"/>
                    <exon start="69739" stop="69638"/>
                    <exon start="69539" stop="69459"/>
                    <exon start="69388" stop="69297"/>
                    <exon start="69158" stop="69143"/>
                    <exon start="69033" stop="68923"/>
                    <exon start="68830" stop="68729"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1578</number_coding_nucleotides>
                  <number_encoded_amino_acids>526</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RDFDGTTISLLTFSFPFSCKSNIFFLLLYASCSPLSFSLLSAPQKSGEVESPRVSMGAFSNEELSFSSNFDFASSQDLRFSKQIHDNVHGNIYIDPLYLKFIDTEQFQRLRDLKQLGVTHMVYPGAVHSRFEHSLGVYWLANEAVHKLKTHQGMELGIDHFDIQTVKLAGLLHDIGHGPFSHLFEREFLPQVCNGLDWSHEQMSVDMIDHIVDERRIDIDSGTIKRVKEMILASSKFTLTKSSREKQFLYDIVANGRNGVDVDKFDYIVRDSRACAVGCNFQFERLMETMRVLGDEICYRAKDYLTIHKLFATRADLHRTVYTHAKVKAIELMIVDALVKANDYLHISSHIEHPSQYWKLDDTILKTIETAPDPELKESRDLILRVRRRDLYQFCNEYAVPRDKIEHFKDVTAHDIVCSQKSSSETLNEEDVAVTNVRIDLTRGRHNPLESIHFFKDYESEEKFSIPDDRISHLLPSSYQDMIVRVYSKKPHLVEAISDAFENFQLKTYGIKAQVHATPEKKKRRV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="75402" e_stop="75191"/>
            <exon e_start="75099" e_stop="74947"/>
            <exon e_start="73979" e_stop="73942"/>
            <exon e_start="73707" e_stop="73685"/>
            <exon e_start="72819" e_stop="72713"/>
            <exon e_start="72626" e_stop="72575"/>
            <exon e_start="72488" e_stop="72404"/>
            <exon e_start="71710" e_stop="71620"/>
            <exon e_start="70820" e_stop="70782"/>
            <exon e_start="70584" e_stop="70517"/>
            <exon e_start="70423" e_stop="70361"/>
            <exon e_start="70255" e_stop="70200"/>
            <exon e_start="70119" e_stop="70046"/>
            <exon e_start="69913" e_stop="69638"/>
            <exon e_start="69539" e_stop="69459"/>
            <exon e_start="69388" e_stop="69297"/>
            <exon e_start="69158" e_stop="69143"/>
            <exon e_start="69033" e_stop="68923"/>
            <exon e_start="68830" e_stop="68448"/>
            <exon e_start="68079" e_stop="68052"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.915" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.908" e_score="1.000"/>
          <exon-intron don_prob="0.864" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.938" e_score="1.000"/>
          <exon-intron don_prob="0.882" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.768" e_score="1.000"/>
          <exon-intron don_prob="0.822" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.939" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.873" acc_prob="0.993" e_score="0.996"/>
          <exon-intron don_prob="0.957" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.470" acc_prob="0.434" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.956" e_score="1.000"/>
          <exon-intron don_prob="0.408" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.786"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="75402" e_stop="75191" e_length="212"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="75190" i_stop="75100" i_length="91"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="75099" e_stop="74947" e_length="153"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.915">
            <gDNA_intron_boundary i_start="74946" i_stop="73980" i_length="967"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="73979" e_stop="73942" e_length="38"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.964">
            <gDNA_intron_boundary i_start="73941" i_stop="73708" i_length="234"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="73707" e_stop="73685" e_length="23"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.908">
            <gDNA_intron_boundary i_start="73684" i_stop="72820" i_length="865"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="72819" e_stop="72713" e_length="107"/>
          </exon>
          <intron i_serial="5" don_prob="0.864" acc_prob="0.996">
            <gDNA_intron_boundary i_start="72712" i_stop="72627" i_length="86"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="72626" e_stop="72575" e_length="52"/>
          </exon>
          <intron i_serial="6" don_prob="0.983" acc_prob="0.938">
            <gDNA_intron_boundary i_start="72574" i_stop="72489" i_length="86"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="72488" e_stop="72404" e_length="85"/>
          </exon>
          <intron i_serial="7" don_prob="0.882" acc_prob="1.000">
            <gDNA_intron_boundary i_start="72403" i_stop="71711" i_length="693"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="71710" e_stop="71620" e_length="91"/>
          </exon>
          <intron i_serial="8" don_prob="1.000" acc_prob="0.768">
            <gDNA_intron_boundary i_start="71619" i_stop="70821" i_length="799"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="70820" e_stop="70782" e_length="39"/>
          </exon>
          <intron i_serial="9" don_prob="0.822" acc_prob="0.979">
            <gDNA_intron_boundary i_start="70781" i_stop="70585" i_length="197"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="70584" e_stop="70517" e_length="68"/>
          </exon>
          <intron i_serial="10" don_prob="0.986" acc_prob="0.987">
            <gDNA_intron_boundary i_start="70516" i_stop="70424" i_length="93"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="70423" e_stop="70361" e_length="63"/>
          </exon>
          <intron i_serial="11" don_prob="0.939" acc_prob="0.976">
            <gDNA_intron_boundary i_start="70360" i_stop="70256" i_length="105"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="70255" e_stop="70200" e_length="56"/>
          </exon>
          <intron i_serial="12" don_prob="0.982" acc_prob="0.993">
            <gDNA_intron_boundary i_start="70199" i_stop="70120" i_length="80"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="70119" e_stop="70046" e_length="74"/>
          </exon>
          <intron i_serial="13" don_prob="0.961" acc_prob="0.999">
            <gDNA_intron_boundary i_start="70045" i_stop="69914" i_length="132"/>
          </intron>
          <exon e_serial="14" e_score="0.996">
            <gDNA_exon_boundary e_start="69913" e_stop="69638" e_length="276"/>
          </exon>
          <intron i_serial="14" don_prob="0.873" acc_prob="0.993">
            <gDNA_intron_boundary i_start="69637" i_stop="69540" i_length="98"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="69539" e_stop="69459" e_length="81"/>
          </exon>
          <intron i_serial="15" don_prob="0.957" acc_prob="0.992">
            <gDNA_intron_boundary i_start="69458" i_stop="69389" i_length="70"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="69388" e_stop="69297" e_length="92"/>
          </exon>
          <intron i_serial="16" don_prob="0.470" acc_prob="0.434">
            <gDNA_intron_boundary i_start="69296" i_stop="69159" i_length="138"/>
          </intron>
          <exon e_serial="17" e_score="1.000">
            <gDNA_exon_boundary e_start="69158" e_stop="69143" e_length="16"/>
          </exon>
          <intron i_serial="17" don_prob="0.990" acc_prob="0.956">
            <gDNA_intron_boundary i_start="69142" i_stop="69034" i_length="109"/>
          </intron>
          <exon e_serial="18" e_score="1.000">
            <gDNA_exon_boundary e_start="69033" e_stop="68923" e_length="111"/>
          </exon>
          <intron i_serial="18" don_prob="0.408" acc_prob="0.976">
            <gDNA_intron_boundary i_start="68922" i_stop="68831" i_length="92"/>
          </intron>
          <exon e_serial="19" e_score="1.000">
            <gDNA_exon_boundary e_start="68830" e_stop="68448" e_length="383"/>
          </exon>
          <intron i_serial="19" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="68447" i_stop="68080" i_length="368"/>
          </intron>
          <exon e_serial="20" e_score="0.786">
            <gDNA_exon_boundary e_start="68079" e_stop="68052" e_length="28"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75402" stop="75191"/>
              <exon start="75099" stop="74947"/>
              <exon start="73979" stop="73942"/>
              <exon start="73707" stop="73685"/>
              <exon start="72819" stop="72713"/>
              <exon start="72626" stop="72575"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332503" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75220" stop="75191"/>
              <exon start="75099" stop="74947"/>
              <exon start="73979" stop="73942"/>
              <exon start="73707" stop="73685"/>
              <exon start="72819" stop="72765"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338725" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75051" stop="74947"/>
              <exon start="73979" stop="73942"/>
              <exon start="73707" stop="73685"/>
              <exon start="72819" stop="72713"/>
              <exon start="72626" stop="72575"/>
              <exon start="72488" stop="72404"/>
              <exon start="71710" stop="71620"/>
              <exon start="70820" stop="70782"/>
              <exon start="70584" stop="70517"/>
              <exon start="70423" stop="70361"/>
              <exon start="70255" stop="70200"/>
              <exon start="70119" stop="70054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548022" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70230" stop="70200"/>
              <exon start="70119" stop="70046"/>
              <exon start="69913" stop="69638"/>
              <exon start="69539" stop="69459"/>
              <exon start="69388" stop="69365"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323877" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69658" stop="69638"/>
              <exon start="69539" stop="69459"/>
              <exon start="69388" stop="69297"/>
              <exon start="69158" stop="69143"/>
              <exon start="69033" stop="68923"/>
              <exon start="68830" stop="68448"/>
              <exon start="68079" stop="68052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538230" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGCCTGTGTCGCTTGCTGCTGCAGCAATAGAACAGAAATTAAAAAAACGAGACATTTGATAATAGTAATTGAAATAAAGAGACTTTGACGGCACTACTATATCACTACTCACATTCTCCTTCCCATTTTCGTGCAAATCAAATATATTCTTCCTCCTACTCTACGCCAGCTGCTCTCCTCTCTCTTTCTCTCTCCTTTCGGCACCTCAAAAG : AGTGGTGAAGTAGAGAGCCCAAGGGTGAGTATGGGAGCTTTTTCAAATGAAGAACTTAGTTTCTCTTCCAATTTCGACTTCGCTTCCTCTCAGGATCTCAGATTCTCTAAGCAAATCCATGACAACGTTCACGGCAACATCTACATCGACCCG : CTCTACTTGAAGTTCATTGACACAGAACAATTTCAAAG : GCTTCGTGATCTTAAACAACTAG : GTGTGACACACATGGTCTATCCAGGAGCAGTGCATTCTAGATTTGAGCATTCCCTTGGAGTGTATTGGCTTGCCAATGAAGCTGTCCATAAGCTTAAAACCCACCAA : GGTATGGAGCTTGGAATTGATCACTTTGATATACAAACAGTGAAACTTGCAG : GTCTTCTACATGATATTGGACATGGACCTTTTAGCCACTTGTTTGAACGCGAGTTTCTTCCTCAAGTTTGCAATGGATTGGACTG : GTCTCATGAGCAAATGTCTGTGGACATGATTGATCACATTGTTGATGAGCGTCGTATTGATATTGATTCTGGAACCATTAAAAGGGTCAAG : GAAATGATACTTGCTAGTTCCAAGTTTACGTTGACAAAA : AGCTCAAGGGAGAAGCAGTTCTTATATGATATTGTGGCTAATGGTCGAAATGGAGTCGATGTTGACAA : GTTTGATTACATTGTCCGAGATAGCCGTGCGTGTGCAGTAGGATGCAATTTTCAATTTGAGAG : GTTGATGGAAACTATGAGAGTATTGGGAGATGAGATATGTTATCGAGCCAAAGATT : ATTTAACCATCCACAAGTTATTTGCCACACGAGCTGATCTACACAGAACTGTTTATACTCACGCTAAAGTGAAG : GCAATAGAGCTTATGATTGTAGATGCACTAGTGAAAGCAAATGATTATCTACACATATCATCACATATAGAGCATCCTTCTCAATACTGGAAGGTCGGCATGGTCTTTTTGTTAGCTTCAACCTCCTTAATTCATGGAACCATGAAAATAATTTCTCTGTGTATGTGGAAGTAGTTAGATGACACCATTTTAAAAACCATCGAGACTGCTCCAGACCCGGAACTGAAGGAATCTAGGGATTTGATCCTTCGTGTCCGAAGGAGAGATTTGTACCAG : TTCTGTAATGAGTATGCTGTCCCAAGAGACAAAATAGAGCATTTCAAGGATGTCACGGCACATGATATTGTCTGTTCGCAG : AAAAGTAGCAGTGAGACACTTAATGAAGAGGATGTTGCTGTGACCAATGTCAGGATAGATCTGACACGCGGGAGGCATAATCCGCTTGAAAG : TATCCATTTTTTCAAG : GATTATGAAAGTGAGGAGAAGTTCTCTATACCTGATGATCGCATCAGCCACTTGCTGCCATCATCATATCAAGATATGATTGTGAGAGTCTACTCCAAAAAGCCCCACCTG : GTGGAAGCTATTTCTGATGCATTTGAAAATTTCCAGTTAAAGACTTATGGAATAAAAGCACAGGTTCATGCAACACCTGAGAAGAAAAAACGCCGTGTATGATATTTCCCCAGTCATCACTACAAAATCCACAGTAGATATATGTGATTATAGTATATCTCAAGCAACATATTACAGTCCATTTGTACAGAAGTCTTTAAATGACACGTGAAAGGCCTCTCAAGAGTTATACTAGAGTTTTTGTAGAAAGTTGCTACCATTTACTGGATATGATAATATCCTCCGAGTACTCTCAACAATTTCTTGTATCCTAGCATTACTCGAAAAATGGATTTCTTGGTATAACCGACTTCTGAATATTACAGAAGCTGATGCTTTTATAA : ATAAAAAGAAAAAAAAAAACAAATTGAA</gDNA_template>
            <first_frame> G  L  C  R  L  L  L  Q  Q  *  N  R  N  *  K  N  E  T  F  D  N  S  N  *  N  K  E  T  L  T  A  L  L  Y  H  Y  S  H  S  P  S  H  F  R  A  N  Q  I  Y  S  S  S  Y  S  T  P  A  A  L  L  S  L  S  L  S  F  R  H  L  K  R :   V  V  K  *  R  A  Q  G  *  V  W  E  L  F  Q  M  K  N  L  V  S  L  P  I  S  T  S  L  P  L  R  I  S  D  S  L  S  K  S  M  T  T  F  T  A  T  S  T  S  T  R :   S  T  *  S  S  L  T  Q  N  N  F  K   : G  F  V  I  L  N  N  *  :  V  *  H  T  W  S  I  Q  E  Q  C  I  L  D  L  S  I  P  L  E  C  I  G  L  P  M  K  L  S  I  S  L  K  P  T  K :   V  W  S  L  E  L  I  T  L  I  Y  K  Q  *  N  L  Q  :  V  F  Y  M  I  L  D  M  D  L  L  A  T  C  L  N  A  S  F  F  L  K  F  A  M  D  W  T   : G  L  M  S  K  C  L  W  T  *  L  I  T  L  L  M  S  V  V  L  I  L  I  L  E  P  L  K  G  S  R :   K  *  Y  L  L  V  P  S  L  R  *  Q  K :   A  Q  G  R  S  S  S  Y  M  I  L  W  L  M  V  E  M  E  S  M  L  T   : S  L  I  T  L  S  E  I  A  V  R  V  Q  *  D  A  I  F  N  L  R   : G  *  W  K  L  *  E  Y  W  E  M  R  Y  V  I  E  P  K  I  :  I  *  P  S  T  S  Y  L  P  H  E  L  I  Y  T  E  L  F  I  L  T  L  K  *  R :   Q  *  S  L  *  L  *  M  H  *  *  K  Q  M  I  I  Y  T  Y  H  H  I  *  S  I  L  L  N  T  G  R  S  A  W  S  F  C  *  L  Q  P  P  *  F  M  E  P  *  K  *  F  L  C  V  C  G  S  S  *  M  T  P  F  *  K  P  S  R  L  L  Q  T  R  N  *  R  N  L  G  I  *  S  F  V  S  E  G  E  I  C  T  S :   S  V  M  S  M  L  S  Q  E  T  K  *  S  I  S  R  M  S  R  H  M  I  L  S  V  R  R :   K  V  A  V  R  H  L  M  K  R  M  L  L  *  P  M  S  G  *  I  *  H  A  G  G  I  I  R  L  K   : V  S  I  F  S  R :   I  M  K  V  R  R  S  S  L  Y  L  M  I  A  S  A  T  C  C  H  H  H  I  K  I  *  L  *  E  S  T  P  K  S  P  T  W :   W  K  L  F  L  M  H  L  K  I  S  S  *  R  L  M  E  *  K  H  R  F  M  Q  H  L  R  R  K  N  A  V  Y  D  I  S  P  V  I  T  T  K  S  T  V  D  I  C  D  Y  S  I  S  Q  A  T  Y  Y  S  P  F  V  Q  K  S  L  N  D  T  *  K  A  S  Q  E  L  Y  *  S  F  C  R  K  L  L  P  F  T  G  Y  D  N  I  L  R  V  L  S  T  I  S  C  I  L  A  L  L  E  K  W  I  S  W  Y  N  R  L  L  N  I  T  E  A  D  A  F  I   : N  K  K  K  K  K  N  K  L   </first_frame>
            <second_frame>  A  C  V  A  C  C  C  S  N  R  T  E  I  K  K  T  R  H  L  I  I  V  I  E  I  K  R  L  *  R  H  Y  Y  I  T  T  H  I  L  L  P  I  F  V  Q  I  K  Y  I  L  P  P  T  L  R  Q  L  L  S  S  L  F  L  S  P  F  G  T  S  K   : E  W  *  S  R  E  P  K  G  E  Y  G  S  F  F  K  *  R  T  *  F  L  F  Q  F  R  L  R  F  L  S  G  S  Q  I  L  *  A  N  P  *  Q  R  S  R  Q  H  L  H  R  P   : A  L  L  E  V  H  *  H  R  T  I  S  K  :  A  S  *  S  *  T  T  R :   C  D  T  H  G  L  S  R  S  S  A  F  *  I  *  A  F  P  W  S  V  L  A  C  Q  *  S  C  P  *  A  *  N  P  P   : R  Y  G  A  W  N  *  S  L  *  Y  T  N  S  E  T  C  R :   S  S  T  *  Y  W  T  W  T  F  *  P  L  V  *  T  R  V  S  S  S  S  L  Q  W  I  G  L  :  V  S  *  A  N  V  C  G  H  D  *  S  H  C  *  *  A  S  Y  *  Y  *  F  W  N  H  *  K  G  Q   : G  N  D  T  C  *  F  Q  V  Y  V  D  K   : K  L  K  G  E  A  V  L  I  *  Y  C  G  *  W  S  K  W  S  R  C  *  Q  :  V  *  L  H  C  P  R  *  P  C  V  C  S  R  M  Q  F  S  I  *  E  :  V  D  G  N  Y  E  S  I  G  R  *  D  M  L  S  S  Q  R  L :   F  N  H  P  Q  V  I  C  H  T  S  *  S  T  Q  N  C  L  Y  S  R  *  S  E   : G  N  R  A  Y  D  C  R  C  T  S  E  S  K  *  L  S  T  H  I  I  T  Y  R  A  S  F  S  I  L  E  G  R  H  G  L  F  V  S  F  N  L  L  N  S  W  N  H  E  N  N  F  S  V  Y  V  E  V  V  R  *  H  H  F  K  N  H  R  D  C  S  R  P  G  T  E  G  I  *  G  F  D  P  S  C  P  K  E  R  F  V  P   : V  L  *  *  V  C  C  P  K  R  Q  N  R  A  F  Q  G  C  H  G  T  *  Y  C  L  F  A   : E  K  *  Q  *  D  T  *  *  R  G  C  C  C  D  Q  C  Q  D  R  S  D  T  R  E  A  *  S  A  *  K  :  Y  P  F  F  Q   : G  L  *  K  *  G  E  V  L  Y  T  *  *  S  H  Q  P  L  A  A  I  I  I  S  R  Y  D  C  E  S  L  L  Q  K  A  P  P   : G  G  S  Y  F  *  C  I  *  K  F  P  V  K  D  L  W  N  K  S  T  G  S  C  N  T  *  E  E  K  T  P  C  M  I  F  P  Q  S  S  L  Q  N  P  Q  *  I  Y  V  I  I  V  Y  L  K  Q  H  I  T  V  H  L  Y  R  S  L  *  M  T  R  E  R  P  L  K  S  Y  T  R  V  F  V  E  S  C  Y  H  L  L  D  M  I  I  S  S  E  Y  S  Q  Q  F  L  V  S  *  H  Y  S  K  N  G  F  L  G  I  T  D  F  *  I  L  Q  K  L  M  L  L  *  :  I  K  R  K  K  K  T  N  *  </second_frame>
            <third_frame>   P  V  S  L  A  A  A  A  I  E  Q  K  L  K  K  R  D  I  *  *  *  *  L  K  *  R  D  F  D  G  T  T  I  S  L  L  T  F  S  F  P  F  S  C  K  S  N  I  F  F  L  L  L  Y  A  S  C  S  P  L  S  F  S  L  L  S  A  P  Q  K  :  S  G  E  V  E  S  P  R  V  S  M  G  A  F  S  N  E  E  L  S  F  S  S  N  F  D  F  A  S  S  Q  D  L  R  F  S  K  Q  I  H  D  N  V  H  G  N  I  Y  I  D  P  :  L  Y  L  K  F  I  D  T  E  Q  F  Q  R :   L  R  D  L  K  Q  L   : G  V  T  H  M  V  Y  P  G  A  V  H  S  R  F  E  H  S  L  G  V  Y  W  L  A  N  E  A  V  H  K  L  K  T  H  Q  :  G  M  E  L  G  I  D  H  F  D  I  Q  T  V  K  L  A   : G  L  L  H  D  I  G  H  G  P  F  S  H  L  F  E  R  E  F  L  P  Q  V  C  N  G  L  D  W :   S  H  E  Q  M  S  V  D  M  I  D  H  I  V  D  E  R  R  I  D  I  D  S  G  T  I  K  R  V  K  :  E  M  I  L  A  S  S  K  F  T  L  T  K  :  S  S  R  E  K  Q  F  L  Y  D  I  V  A  N  G  R  N  G  V  D  V  D  K :   F  D  Y  I  V  R  D  S  R  A  C  A  V  G  C  N  F  Q  F  E  R :   L  M  E  T  M  R  V  L  G  D  E  I  C  Y  R  A  K  D   : Y  L  T  I  H  K  L  F  A  T  R  A  D  L  H  R  T  V  Y  T  H  A  K  V  K  :  A  I  E  L  M  I  V  D  A  L  V  K  A  N  D  Y  L  H  I  S  S  H  I  E  H  P  S  Q  Y  W  K  V  G  M  V  F  L  L  A  S  T  S  L  I  H  G  T  M  K  I  I  S  L  C  M  W  K  *  L  D  D  T  I  L  K  T  I  E  T  A  P  D  P  E  L  K  E  S  R  D  L  I  L  R  V  R  R  R  D  L  Y  Q  :  F  C  N  E  Y  A  V  P  R  D  K  I  E  H  F  K  D  V  T  A  H  D  I  V  C  S  Q  :  K  S  S  S  E  T  L  N  E  E  D  V  A  V  T  N  V  R  I  D  L  T  R  G  R  H  N  P  L  E  S :   I  H  F  F  K  :  D  Y  E  S  E  E  K  F  S  I  P  D  D  R  I  S  H  L  L  P  S  S  Y  Q  D  M  I  V  R  V  Y  S  K  K  P  H  L  :  V  E  A  I  S  D  A  F  E  N  F  Q  L  K  T  Y  G  I  K  A  Q  V  H  A  T  P  E  K  K  K  R  R  V  *  Y  F  P  S  H  H  Y  K  I  H  S  R  Y  M  *  L  *  Y  I  S  S  N  I  L  Q  S  I  C  T  E  V  F  K  *  H  V  K  G  L  S  R  V  I  L  E  F  L  *  K  V  A  T  I  Y  W  I  *  *  Y  P  P  S  T  L  N  N  F  L  Y  P  S  I  T  R  K  M  D  F  L  V  *  P  T  S  E  Y  Y  R  S  *  C  F  Y  K :   *  K  E  K  K  K  Q  I  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75325" stop="75191"/>
                    <exon start="75099" stop="74947"/>
                    <exon start="73979" stop="73942"/>
                    <exon start="73707" stop="73685"/>
                    <exon start="72819" stop="72713"/>
                    <exon start="72626" stop="72575"/>
                    <exon start="72488" stop="72404"/>
                    <exon start="71710" stop="71620"/>
                    <exon start="70820" stop="70782"/>
                    <exon start="70584" stop="70517"/>
                    <exon start="70423" stop="70361"/>
                    <exon start="70255" stop="70200"/>
                    <exon start="70119" stop="70046"/>
                    <exon start="69913" stop="69740"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1155</number_coding_nucleotides>
                  <number_encoded_amino_acids>385</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RDFDGTTISLLTFSFPFSCKSNIFFLLLYASCSPLSFSLLSAPQKSGEVESPRVSMGAFSNEELSFSSNFDFASSQDLRFSKQIHDNVHGNIYIDPLYLKFIDTEQFQRLRDLKQLGVTHMVYPGAVHSRFEHSLGVYWLANEAVHKLKTHQGMELGIDHFDIQTVKLAGLLHDIGHGPFSHLFEREFLPQVCNGLDWSHEQMSVDMIDHIVDERRIDIDSGTIKRVKEMILASSKFTLTKSSREKQFLYDIVANGRNGVDVDKFDYIVRDSRACAVGCNFQFERLMETMRVLGDEICYRAKDYLTIHKLFATRADLHRTVYTHAKVKAIELMIVDALVKANDYLHISSHIEHPSQYWKVGMVFLLASTSLIHGTMKIISLCMWK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69739" stop="69638"/>
                    <exon start="69539" stop="69459"/>
                    <exon start="69388" stop="69297"/>
                    <exon start="69158" stop="69143"/>
                    <exon start="69033" stop="68923"/>
                    <exon start="68830" stop="68729"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>501</number_coding_nucleotides>
                  <number_encoded_amino_acids>167</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LDDTILKTIETAPDPELKESRDLILRVRRRDLYQFCNEYAVPRDKIEHFKDVTAHDIVCSQKSSSETLNEEDVAVTNVRIDLTRGRHNPLESIHFFKDYESEEKFSIPDDRISHLLPSSYQDMIVRVYSKKPHLVEAISDAFENFQLKTYGIKAQVHATPEKKKRRV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="75123" e_stop="74947"/>
            <exon e_start="73979" e_stop="73942"/>
            <exon e_start="73707" e_stop="73685"/>
            <exon e_start="72819" e_stop="72713"/>
            <exon e_start="72626" e_stop="72575"/>
            <exon e_start="72488" e_stop="72404"/>
            <exon e_start="71710" e_stop="71620"/>
            <exon e_start="70820" e_stop="70782"/>
            <exon e_start="70584" e_stop="70517"/>
            <exon e_start="70423" e_stop="70361"/>
            <exon e_start="70255" e_stop="70200"/>
            <exon e_start="70119" e_stop="70046"/>
            <exon e_start="69913" e_stop="69638"/>
            <exon e_start="69539" e_stop="69459"/>
            <exon e_start="69388" e_stop="69297"/>
            <exon e_start="69158" e_stop="69143"/>
            <exon e_start="69033" e_stop="68923"/>
            <exon e_start="68830" e_stop="68447"/>
            <exon e_start="68071" e_stop="68057"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.915" e_score="0.994"/>
          <exon-intron don_prob="1.000" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.908" e_score="1.000"/>
          <exon-intron don_prob="0.864" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.938" e_score="1.000"/>
          <exon-intron don_prob="0.882" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.768" e_score="1.000"/>
          <exon-intron don_prob="0.822" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.939" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.873" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.470" acc_prob="0.434" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.956" e_score="1.000"/>
          <exon-intron don_prob="0.408" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.995"/>
          <exon-only e_score="0.933"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="75123" e_stop="74947" e_length="177"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.915">
            <gDNA_intron_boundary i_start="74946" i_stop="73980" i_length="967"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="73979" e_stop="73942" e_length="38"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.964">
            <gDNA_intron_boundary i_start="73941" i_stop="73708" i_length="234"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="73707" e_stop="73685" e_length="23"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.908">
            <gDNA_intron_boundary i_start="73684" i_stop="72820" i_length="865"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="72819" e_stop="72713" e_length="107"/>
          </exon>
          <intron i_serial="4" don_prob="0.864" acc_prob="0.996">
            <gDNA_intron_boundary i_start="72712" i_stop="72627" i_length="86"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="72626" e_stop="72575" e_length="52"/>
          </exon>
          <intron i_serial="5" don_prob="0.983" acc_prob="0.938">
            <gDNA_intron_boundary i_start="72574" i_stop="72489" i_length="86"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="72488" e_stop="72404" e_length="85"/>
          </exon>
          <intron i_serial="6" don_prob="0.882" acc_prob="1.000">
            <gDNA_intron_boundary i_start="72403" i_stop="71711" i_length="693"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="71710" e_stop="71620" e_length="91"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.768">
            <gDNA_intron_boundary i_start="71619" i_stop="70821" i_length="799"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="70820" e_stop="70782" e_length="39"/>
          </exon>
          <intron i_serial="8" don_prob="0.822" acc_prob="0.979">
            <gDNA_intron_boundary i_start="70781" i_stop="70585" i_length="197"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="70584" e_stop="70517" e_length="68"/>
          </exon>
          <intron i_serial="9" don_prob="0.986" acc_prob="0.987">
            <gDNA_intron_boundary i_start="70516" i_stop="70424" i_length="93"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="70423" e_stop="70361" e_length="63"/>
          </exon>
          <intron i_serial="10" don_prob="0.939" acc_prob="0.976">
            <gDNA_intron_boundary i_start="70360" i_stop="70256" i_length="105"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="70255" e_stop="70200" e_length="56"/>
          </exon>
          <intron i_serial="11" don_prob="0.982" acc_prob="0.993">
            <gDNA_intron_boundary i_start="70199" i_stop="70120" i_length="80"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="70119" e_stop="70046" e_length="74"/>
          </exon>
          <intron i_serial="12" don_prob="0.961" acc_prob="0.999">
            <gDNA_intron_boundary i_start="70045" i_stop="69914" i_length="132"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="69913" e_stop="69638" e_length="276"/>
          </exon>
          <intron i_serial="13" don_prob="0.873" acc_prob="0.993">
            <gDNA_intron_boundary i_start="69637" i_stop="69540" i_length="98"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="69539" e_stop="69459" e_length="81"/>
          </exon>
          <intron i_serial="14" don_prob="0.957" acc_prob="0.992">
            <gDNA_intron_boundary i_start="69458" i_stop="69389" i_length="70"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="69388" e_stop="69297" e_length="92"/>
          </exon>
          <intron i_serial="15" don_prob="0.470" acc_prob="0.434">
            <gDNA_intron_boundary i_start="69296" i_stop="69159" i_length="138"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="69158" e_stop="69143" e_length="16"/>
          </exon>
          <intron i_serial="16" don_prob="0.990" acc_prob="0.956">
            <gDNA_intron_boundary i_start="69142" i_stop="69034" i_length="109"/>
          </intron>
          <exon e_serial="17" e_score="1.000">
            <gDNA_exon_boundary e_start="69033" e_stop="68923" e_length="111"/>
          </exon>
          <intron i_serial="17" don_prob="0.408" acc_prob="0.976">
            <gDNA_intron_boundary i_start="68922" i_stop="68831" i_length="92"/>
          </intron>
          <exon e_serial="18" e_score="0.995">
            <gDNA_exon_boundary e_start="68830" e_stop="68447" e_length="384"/>
          </exon>
          <intron i_serial="18" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="68446" i_stop="68072" i_length="375"/>
          </intron>
          <exon e_serial="19" e_score="0.933">
            <gDNA_exon_boundary e_start="68071" e_stop="68057" e_length="15"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75123" stop="74947"/>
              <exon start="73979" stop="73942"/>
              <exon start="73707" stop="73685"/>
              <exon start="72819" stop="72713"/>
              <exon start="72626" stop="72575"/>
              <exon start="72488" stop="72404"/>
              <exon start="71710" stop="71620"/>
              <exon start="70820" stop="70782"/>
              <exon start="70584" stop="70517"/>
              <exon start="70423" stop="70361"/>
              <exon start="70255" stop="70200"/>
              <exon start="70119" stop="70046"/>
              <exon start="69913" stop="69638"/>
              <exon start="69539" stop="69459"/>
              <exon start="69388" stop="69297"/>
              <exon start="69158" stop="69143"/>
              <exon start="69033" stop="68923"/>
              <exon start="68830" stop="68447"/>
              <exon start="68071" stop="68057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745146" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75051" stop="74947"/>
              <exon start="73979" stop="73942"/>
              <exon start="73707" stop="73685"/>
              <exon start="72819" stop="72713"/>
              <exon start="72626" stop="72575"/>
              <exon start="72488" stop="72404"/>
              <exon start="71710" stop="71620"/>
              <exon start="70820" stop="70782"/>
              <exon start="70584" stop="70517"/>
              <exon start="70423" stop="70361"/>
              <exon start="70255" stop="70200"/>
              <exon start="70119" stop="70054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548022" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70230" stop="70200"/>
              <exon start="70119" stop="70046"/>
              <exon start="69913" stop="69638"/>
              <exon start="69539" stop="69459"/>
              <exon start="69388" stop="69365"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323877" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGTTGTTTTCTCTGTGCTGTGTAGAGTGGTGAAGTAGAGAGCCCAAGGGTGAGTATGGGAGCTTTTTCAAATGAAGAACTTAGTTTCTCTTCCAATTTCGACTTCGCTTCCTCTCAGGATCTCAGATTCTCTAAGCAAATCCATGACAACGTTCACGGCAACATCTACATCGACCCG : CTCTACTTGAAGTTCATTGACACAGAACAATTTCAAAG : GCTTCGTGATCTTAAACAACTAG : GTGTGACACACATGGTCTATCCAGGAGCAGTGCATTCTAGATTTGAGCATTCCCTTGGAGTGTATTGGCTTGCCAATGAAGCTGTCCATAAGCTTAAAACCCACCAA : GGTATGGAGCTTGGAATTGATCACTTTGATATACAAACAGTGAAACTTGCAG : GTCTTCTACATGATATTGGACATGGACCTTTTAGCCACTTGTTTGAACGCGAGTTTCTTCCTCAAGTTTGCAATGGATTGGACTG : GTCTCATGAGCAAATGTCTGTGGACATGATTGATCACATTGTTGATGAGCGTCGTATTGATATTGATTCTGGAACCATTAAAAGGGTCAAG : GAAATGATACTTGCTAGTTCCAAGTTTACGTTGACAAAA : AGCTCAAGGGAGAAGCAGTTCTTATATGATATTGTGGCTAATGGTCGAAATGGAGTCGATGTTGACAA : GTTTGATTACATTGTCCGAGATAGCCGTGCGTGTGCAGTAGGATGCAATTTTCAATTTGAGAG : GTTGATGGAAACTATGAGAGTATTGGGAGATGAGATATGTTATCGAGCCAAAGATT : ATTTAACCATCCACAAGTTATTTGCCACACGAGCTGATCTACACAGAACTGTTTATACTCACGCTAAAGTGAAG : GCAATAGAGCTTATGATTGTAGATGCACTAGTGAAAGCAAATGATTATCTACACATATCATCACATATAGAGCATCCTTCTCAATACTGGAAGGTCGGCATGGTCTTTTTGTTAGCTTCAACCTCCTTAATTCATGGAACCATGAAAATAATTTCTCTGTGTATGTGGAAGTAGTTAGATGACACCATTTTAAAAACCATCGAGACTGCTCCAGACCCGGAACTGAAGGAATCTAGGGATTTGATCCTTCGTGTCCGAAGGAGAGATTTGTACCAG : TTCTGTAATGAGTATGCTGTCCCAAGAGACAAAATAGAGCATTTCAAGGATGTCACGGCACATGATATTGTCTGTTCGCAG : AAAAGTAGCAGTGAGACACTTAATGAAGAGGATGTTGCTGTGACCAATGTCAGGATAGATCTGACACGCGGGAGGCATAATCCGCTTGAAAG : TATCCATTTTTTCAAG : GATTATGAAAGTGAGGAGAAGTTCTCTATACCTGATGATCGCATCAGCCACTTGCTGCCATCATCATATCAAGATATGATTGTGAGAGTCTACTCCAAAAAGCCCCACCTG : GTGGAAGCTATTTCTGATGCATTTGAAAATTTCCAGTTAAAGACTTATGGAATAAAAGCACAGGTTCATGCAACACCTGAGAAGAAAAAACGCCGTGTATGATATTTCCCCAGTCATCACTACAAAATCCACAGTAGATATATGTGATTATAGTATATCTCAAGCAACATATTACAGTCCATTTGTACAGAAGTCTTTAAATGACACGTGAAAGGCCTCTCAAGAGTTATACTAGAGTTTTTGTAGAAAGTTGCTACCATTTACTGGATATGATAATATCCTCCGAGTACTCTCAACAATTTCTTGTATCCTAGCATTACTCGAAAAATGGATTTCTTGGTATAACCGACTTCTGAATATTACAGAAGCTGATGCTTTTATAAT : AAAAAAAAAAACAAA</gDNA_template>
            <first_frame> C  C  F  L  C  A  V  *  S  G  E  V  E  S  P  R  V  S  M  G  A  F  S  N  E  E  L  S  F  S  S  N  F  D  F  A  S  S  Q  D  L  R  F  S  K  Q  I  H  D  N  V  H  G  N  I  Y  I  D  P  :  L  Y  L  K  F  I  D  T  E  Q  F  Q  R :   L  R  D  L  K  Q  L   : G  V  T  H  M  V  Y  P  G  A  V  H  S  R  F  E  H  S  L  G  V  Y  W  L  A  N  E  A  V  H  K  L  K  T  H  Q  :  G  M  E  L  G  I  D  H  F  D  I  Q  T  V  K  L  A   : G  L  L  H  D  I  G  H  G  P  F  S  H  L  F  E  R  E  F  L  P  Q  V  C  N  G  L  D  W :   S  H  E  Q  M  S  V  D  M  I  D  H  I  V  D  E  R  R  I  D  I  D  S  G  T  I  K  R  V  K  :  E  M  I  L  A  S  S  K  F  T  L  T  K  :  S  S  R  E  K  Q  F  L  Y  D  I  V  A  N  G  R  N  G  V  D  V  D  K :   F  D  Y  I  V  R  D  S  R  A  C  A  V  G  C  N  F  Q  F  E  R :   L  M  E  T  M  R  V  L  G  D  E  I  C  Y  R  A  K  D   : Y  L  T  I  H  K  L  F  A  T  R  A  D  L  H  R  T  V  Y  T  H  A  K  V  K  :  A  I  E  L  M  I  V  D  A  L  V  K  A  N  D  Y  L  H  I  S  S  H  I  E  H  P  S  Q  Y  W  K  V  G  M  V  F  L  L  A  S  T  S  L  I  H  G  T  M  K  I  I  S  L  C  M  W  K  *  L  D  D  T  I  L  K  T  I  E  T  A  P  D  P  E  L  K  E  S  R  D  L  I  L  R  V  R  R  R  D  L  Y  Q  :  F  C  N  E  Y  A  V  P  R  D  K  I  E  H  F  K  D  V  T  A  H  D  I  V  C  S  Q  :  K  S  S  S  E  T  L  N  E  E  D  V  A  V  T  N  V  R  I  D  L  T  R  G  R  H  N  P  L  E  S :   I  H  F  F  K  :  D  Y  E  S  E  E  K  F  S  I  P  D  D  R  I  S  H  L  L  P  S  S  Y  Q  D  M  I  V  R  V  Y  S  K  K  P  H  L  :  V  E  A  I  S  D  A  F  E  N  F  Q  L  K  T  Y  G  I  K  A  Q  V  H  A  T  P  E  K  K  K  R  R  V  *  Y  F  P  S  H  H  Y  K  I  H  S  R  Y  M  *  L  *  Y  I  S  S  N  I  L  Q  S  I  C  T  E  V  F  K  *  H  V  K  G  L  S  R  V  I  L  E  F  L  *  K  V  A  T  I  Y  W  I  *  *  Y  P  P  S  T  L  N  N  F  L  Y  P  S  I  T  R  K  M  D  F  L  V  *  P  T  S  E  Y  Y  R  S  *  C  F  Y  N  :  K  K  K  N  K </first_frame>
            <second_frame>  V  V  F  S  V  L  C  R  V  V  K  *  R  A  Q  G  *  V  W  E  L  F  Q  M  K  N  L  V  S  L  P  I  S  T  S  L  P  L  R  I  S  D  S  L  S  K  S  M  T  T  F  T  A  T  S  T  S  T  R :   S  T  *  S  S  L  T  Q  N  N  F  K   : G  F  V  I  L  N  N  *  :  V  *  H  T  W  S  I  Q  E  Q  C  I  L  D  L  S  I  P  L  E  C  I  G  L  P  M  K  L  S  I  S  L  K  P  T  K :   V  W  S  L  E  L  I  T  L  I  Y  K  Q  *  N  L  Q  :  V  F  Y  M  I  L  D  M  D  L  L  A  T  C  L  N  A  S  F  F  L  K  F  A  M  D  W  T   : G  L  M  S  K  C  L  W  T  *  L  I  T  L  L  M  S  V  V  L  I  L  I  L  E  P  L  K  G  S  R :   K  *  Y  L  L  V  P  S  L  R  *  Q  K :   A  Q  G  R  S  S  S  Y  M  I  L  W  L  M  V  E  M  E  S  M  L  T   : S  L  I  T  L  S  E  I  A  V  R  V  Q  *  D  A  I  F  N  L  R   : G  *  W  K  L  *  E  Y  W  E  M  R  Y  V  I  E  P  K  I  :  I  *  P  S  T  S  Y  L  P  H  E  L  I  Y  T  E  L  F  I  L  T  L  K  *  R :   Q  *  S  L  *  L  *  M  H  *  *  K  Q  M  I  I  Y  T  Y  H  H  I  *  S  I  L  L  N  T  G  R  S  A  W  S  F  C  *  L  Q  P  P  *  F  M  E  P  *  K  *  F  L  C  V  C  G  S  S  *  M  T  P  F  *  K  P  S  R  L  L  Q  T  R  N  *  R  N  L  G  I  *  S  F  V  S  E  G  E  I  C  T  S :   S  V  M  S  M  L  S  Q  E  T  K  *  S  I  S  R  M  S  R  H  M  I  L  S  V  R  R :   K  V  A  V  R  H  L  M  K  R  M  L  L  *  P  M  S  G  *  I  *  H  A  G  G  I  I  R  L  K   : V  S  I  F  S  R :   I  M  K  V  R  R  S  S  L  Y  L  M  I  A  S  A  T  C  C  H  H  H  I  K  I  *  L  *  E  S  T  P  K  S  P  T  W :   W  K  L  F  L  M  H  L  K  I  S  S  *  R  L  M  E  *  K  H  R  F  M  Q  H  L  R  R  K  N  A  V  Y  D  I  S  P  V  I  T  T  K  S  T  V  D  I  C  D  Y  S  I  S  Q  A  T  Y  Y  S  P  F  V  Q  K  S  L  N  D  T  *  K  A  S  Q  E  L  Y  *  S  F  C  R  K  L  L  P  F  T  G  Y  D  N  I  L  R  V  L  S  T  I  S  C  I  L  A  L  L  E  K  W  I  S  W  Y  N  R  L  L  N  I  T  E  A  D  A  F  I  I :   K  K  K  T   </second_frame>
            <third_frame>   L  F  S  L  C  C  V  E  W  *  S  R  E  P  K  G  E  Y  G  S  F  F  K  *  R  T  *  F  L  F  Q  F  R  L  R  F  L  S  G  S  Q  I  L  *  A  N  P  *  Q  R  S  R  Q  H  L  H  R  P   : A  L  L  E  V  H  *  H  R  T  I  S  K  :  A  S  *  S  *  T  T  R :   C  D  T  H  G  L  S  R  S  S  A  F  *  I  *  A  F  P  W  S  V  L  A  C  Q  *  S  C  P  *  A  *  N  P  P   : R  Y  G  A  W  N  *  S  L  *  Y  T  N  S  E  T  C  R :   S  S  T  *  Y  W  T  W  T  F  *  P  L  V  *  T  R  V  S  S  S  S  L  Q  W  I  G  L  :  V  S  *  A  N  V  C  G  H  D  *  S  H  C  *  *  A  S  Y  *  Y  *  F  W  N  H  *  K  G  Q   : G  N  D  T  C  *  F  Q  V  Y  V  D  K   : K  L  K  G  E  A  V  L  I  *  Y  C  G  *  W  S  K  W  S  R  C  *  Q  :  V  *  L  H  C  P  R  *  P  C  V  C  S  R  M  Q  F  S  I  *  E  :  V  D  G  N  Y  E  S  I  G  R  *  D  M  L  S  S  Q  R  L :   F  N  H  P  Q  V  I  C  H  T  S  *  S  T  Q  N  C  L  Y  S  R  *  S  E   : G  N  R  A  Y  D  C  R  C  T  S  E  S  K  *  L  S  T  H  I  I  T  Y  R  A  S  F  S  I  L  E  G  R  H  G  L  F  V  S  F  N  L  L  N  S  W  N  H  E  N  N  F  S  V  Y  V  E  V  V  R  *  H  H  F  K  N  H  R  D  C  S  R  P  G  T  E  G  I  *  G  F  D  P  S  C  P  K  E  R  F  V  P   : V  L  *  *  V  C  C  P  K  R  Q  N  R  A  F  Q  G  C  H  G  T  *  Y  C  L  F  A   : E  K  *  Q  *  D  T  *  *  R  G  C  C  C  D  Q  C  Q  D  R  S  D  T  R  E  A  *  S  A  *  K  :  Y  P  F  F  Q   : G  L  *  K  *  G  E  V  L  Y  T  *  *  S  H  Q  P  L  A  A  I  I  I  S  R  Y  D  C  E  S  L  L  Q  K  A  P  P   : G  G  S  Y  F  *  C  I  *  K  F  P  V  K  D  L  W  N  K  S  T  G  S  C  N  T  *  E  E  K  T  P  C  M  I  F  P  Q  S  S  L  Q  N  P  Q  *  I  Y  V  I  I  V  Y  L  K  Q  H  I  T  V  H  L  Y  R  S  L  *  M  T  R  E  R  P  L  K  S  Y  T  R  V  F  V  E  S  C  Y  H  L  L  D  M  I  I  S  S  E  Y  S  Q  Q  F  L  V  S  *  H  Y  S  K  N  G  F  L  G  I  T  D  F  *  I  L  Q  K  L  M  L  L  *   : *  K  K  K  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75099" stop="74947"/>
                    <exon start="73979" stop="73942"/>
                    <exon start="73707" stop="73685"/>
                    <exon start="72819" stop="72713"/>
                    <exon start="72626" stop="72575"/>
                    <exon start="72488" stop="72404"/>
                    <exon start="71710" stop="71620"/>
                    <exon start="70820" stop="70782"/>
                    <exon start="70584" stop="70517"/>
                    <exon start="70423" stop="70361"/>
                    <exon start="70255" stop="70200"/>
                    <exon start="70119" stop="70046"/>
                    <exon start="69913" stop="69740"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1020</number_coding_nucleotides>
                  <number_encoded_amino_acids>340</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SGEVESPRVSMGAFSNEELSFSSNFDFASSQDLRFSKQIHDNVHGNIYIDPLYLKFIDTEQFQRLRDLKQLGVTHMVYPGAVHSRFEHSLGVYWLANEAVHKLKTHQGMELGIDHFDIQTVKLAGLLHDIGHGPFSHLFEREFLPQVCNGLDWSHEQMSVDMIDHIVDERRIDIDSGTIKRVKEMILASSKFTLTKSSREKQFLYDIVANGRNGVDVDKFDYIVRDSRACAVGCNFQFERLMETMRVLGDEICYRAKDYLTIHKLFATRADLHRTVYTHAKVKAIELMIVDALVKANDYLHISSHIEHPSQYWKVGMVFLLASTSLIHGTMKIISLCMWK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69739" stop="69638"/>
                    <exon start="69539" stop="69459"/>
                    <exon start="69388" stop="69297"/>
                    <exon start="69158" stop="69143"/>
                    <exon start="69033" stop="68923"/>
                    <exon start="68830" stop="68729"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>501</number_coding_nucleotides>
                  <number_encoded_amino_acids>167</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LDDTILKTIETAPDPELKESRDLILRVRRRDLYQFCNEYAVPRDKIEHFKDVTAHDIVCSQKSSSETLNEEDVAVTNVRIDLTRGRHNPLESIHFFKDYESEEKFSIPDDRISHLLPSSYQDMIVRVYSKKPHLVEAISDAFENFQLKTYGIKAQVHATPEKKKRRV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="76319" PGL_stop="76042"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="76319" e_stop="76042"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.986">
            <gDNA_exon_boundary e_start="76319" e_stop="76042" e_length="278"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76319" stop="76042"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278518" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAACAGGCAGTGAACCGATGACCTTATTAGCAAAACTAGAAATTGGATTTGTGGTCTCATCCATATAAGCCTTGACGAGCAAGACCGCACCGCCATTGGAGTTGGAATTATTTCTTCTGGATGGAAATGTATAGAAACGTCGAAAGTAACGAAGAGAGGGAGAGATTGAGTTACAGTAGATGGAGGAGGAAGAAGAAGGAGAGTGGAGAGAGGAGACAACCACCATAGTGTTACATGTGGTGGACGTTCAATCTTTGTTTTGATATTTGCCCCTTT</gDNA_template>
            <first_frame> K  N  R  Q  *  T  D  D  L  I  S  K  T  R  N  W  I  C  G  L  I  H  I  S  L  D  E  Q  D  R  T  A  I  G  V  G  I  I  S  S  G  W  K  C  I  E  T  S  K  V  T  K  R  G  R  D  *  V  T  V  D  G  G  G  R  R  R  R  V  E  R  G  D  N  H  H  S  V  T  C  G  G  R  S  I  F  V  L  I  F  A  P   </first_frame>
            <second_frame>  K  T  G  S  E  P  M  T  L  L  A  K  L  E  I  G  F  V  V  S  S  I  *  A  L  T  S  K  T  A  P  P  L  E  L  E  L  F  L  L  D  G  N  V  *  K  R  R  K  *  R  R  E  G  E  I  E  L  Q  *  M  E  E  E  E  E  G  E  W  R  E  E  T  T  T  I  V  L  H  V  V  D  V  Q  S  L  F  *  Y  L  P  L  </second_frame>
            <third_frame>   K  Q  A  V  N  R  *  P  Y  *  Q  N  *  K  L  D  L  W  S  H  P  Y  K  P  *  R  A  R  P  H  R  H  W  S  W  N  Y  F  F  W  M  E  M  Y  R  N  V  E  S  N  E  E  R  E  R  L  S  Y  S  R  W  R  R  K  K  K  E  S  G  E  R  R  Q  P  P  *  C  Y  M  W  W  T  F  N  L  C  F  D  I  C  P  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0016A12.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="76050" PGL_stop="77937"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="76050" e_stop="76463"/>
            <exon e_start="76541" e_stop="76705"/>
            <exon e_start="77179" e_stop="77815"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.925" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.983" e_score="1.000"/>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="76050" e_stop="76463" e_length="414"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.925">
            <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="76541" e_stop="76705" e_length="165"/>
          </exon>
          <intron i_serial="2" don_prob="0.981" acc_prob="0.983">
            <gDNA_intron_boundary i_start="76706" i_stop="77178" i_length="473"/>
          </intron>
          <exon e_serial="3" e_score="0.984">
            <gDNA_exon_boundary e_start="77179" e_stop="77815" e_length="637"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76050" stop="76463"/>
              <exon start="76541" stop="76609"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265567" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76085" stop="76463"/>
              <exon start="76541" stop="76695"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278134" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76086" stop="76463"/>
              <exon start="76541" stop="76547"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292656" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76087" stop="76463"/>
              <exon start="76541" stop="76705"/>
              <exon start="77179" stop="77325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323187" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76088" stop="76463"/>
              <exon start="76541" stop="76705"/>
              <exon start="77179" stop="77365"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326835" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76095" stop="76463"/>
              <exon start="76541" stop="76582"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344756" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76097" stop="76463"/>
              <exon start="76541" stop="76705"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278752" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76100" stop="76463"/>
              <exon start="76541" stop="76637"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205441" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76102" stop="76463"/>
              <exon start="76541" stop="76705"/>
              <exon start="77179" stop="77368"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345335" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76111" stop="76463"/>
              <exon start="76541" stop="76705"/>
              <exon start="77179" stop="77261"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206443" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76111" stop="76463"/>
              <exon start="76541" stop="76705"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76129" stop="76463"/>
              <exon start="76541" stop="76705"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268185" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76139" stop="76463"/>
              <exon start="76541" stop="76705"/>
              <exon start="77179" stop="77366"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551165" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76139" stop="76463"/>
              <exon start="76541" stop="76705"/>
              <exon start="77179" stop="77347"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688982" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76139" stop="76463"/>
              <exon start="76541" stop="76690"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551326" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76139" stop="76463"/>
              <exon start="76541" stop="76690"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688683" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76140" stop="76463"/>
              <exon start="76541" stop="76705"/>
              <exon start="77179" stop="77261"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253860" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76140" stop="76463"/>
              <exon start="76541" stop="76644"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E263121" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76256" stop="76463"/>
              <exon start="76541" stop="76705"/>
              <exon start="77179" stop="77454"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370187" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76256" stop="76463"/>
              <exon start="76541" stop="76705"/>
              <exon start="77179" stop="77401"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271844" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76355" stop="76463"/>
              <exon start="76541" stop="76705"/>
              <exon start="77179" stop="77655"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346807" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76365" stop="76463"/>
              <exon start="76541" stop="76705"/>
              <exon start="77179" stop="77206"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296342" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76670" stop="76705"/>
              <exon start="77179" stop="77815"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370186" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77466" stop="77711"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202904" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAATATCAAAACAAAGATTGAACGTCCACCACATGTAACACTATGGTGGTTGTCTCCTCTCTCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG : ACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAG : AAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTACCATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGCAAAAGGTAGAAATCATTGTCAAAGAGAAGGCAAAGAGAATGGCAGATGGAACTGAAGAAATCAAATATGAGCCCAAGCAATTATCAAAAGAAGCAGTTCAGATGCAAATGAAAGACCTTGAATTTCTTAAGCAAAACAGTTTGAATCAGTGAGGCATGAAATTTATCATCATTTTTAAAGTAAATTTTAGGTACTGGTGACTAACACCAACAGGAAGATTATCCCACAAACATTCGGTATAGGAAATCACAGCCACATGTCATGAATGACAAATCTTCTTCGCACAATGTCGCCAACTAATTAAAAAACATTGCATGTGTATGCTGCCTGCTCTCTTTCTTTTGTGATCAGTCTGCATTTTCTACTTGCACTTGAAAGATATAGTGGCTCTGATTTGTATTCAAAAATTACCTATTACTATAACTGTAATGTTAATGACGACAGTCTCACGTCGAAAATGAGTAAACT</gDNA_template>
            <first_frame> K  Y  Q  N  K  D  *  T  S  T  T  C  N  T  M  V  V  V  S  S  L  H  S  P  S  S  S  S  S  I  Y  C  N  S  I  S  P  S  L  R  Y  F  R  R  F  Y  T  F  P  S  R  R  N  N  S  N  S  N  G  G  A  V  L  L  V  K  A  Y  M  D  E  T  T  N  P  I  S  S  F  A  N  K  V  I  G  S  L  P  V  F  G  L  I  A  R  I  V  N  E  E  G  G  V  G  G  D  F  I  D  F  A  E  F  R  R  R  V  G  N  K  C  S  I  N  D  S  R  A  F  Y  E  F  R  D  R  R  G  K  :  T  G  D  P  L  Y  V  L  L  C  C  W  L  A  A  V  G  A  G  L  L  K  S  E  E  I  L  E  G  V  A  R  L  S  L  A  N  D  I  E  F  E  E  Q  N  F  I  A  M  M  N  E  A  R  E  :  K  R  S  K  L  G  A  P  A  P  T  I  P  M  E  F  R  A  E  K  A  L  E  A  I  H  V  C  C  Y  G  R  D  L  I  D  E  E  D  E  K  L  L  S  T  M  L  N  A  V  F  P  T  V  G  R  Q  K  V  E  I  I  V  K  E  K  A  K  R  M  A  D  G  T  E  E  I  K  Y  E  P  K  Q  L  S  K  E  A  V  Q  M  Q  M  K  D  L  E  F  L  K  Q  N  S  L  N  Q  *  G  M  K  F  I  I  I  F  K  V  N  F  R  Y  W  *  L  T  P  T  G  R  L  S  H  K  H  S  V  *  E  I  T  A  T  C  H  E  *  Q  I  F  F  A  Q  C  R  Q  L  I  K  K  H  C  M  C  M  L  P  A  L  F  L  L  *  S  V  C  I  F  Y  L  H  L  K  D  I  V  A  L  I  C  I  Q  K  L  P  I  T  I  T  V  M  L  M  T  T  V  S  R  R  K  *  V  N  </first_frame>
            <second_frame>  N  I  K  T  K  I  E  R  P  P  H  V  T  L  W  W  L  S  P  L  S  T  L  L  L  L  P  P  P  S  T  V  T  Q  S  L  P  L  F  V  T  F  D  V  S  I  H  F  H  P  E  E  I  I  P  T  P  M  A  V  R  S  C  S  S  R  L  I  W  M  R  P  Q  I  Q  F  L  V  L  L  I  R  S  S  V  H  C  L  F  L  V  S  *  P  E  L  S  M  R  K  V  V  L  E  A  I  L  L  I  L  R  S  S  G  G  E  S  V  T  S  V  P  L  M  I  Q  E  L  F  M  N  F  E  I  D  V  A  R :   Q  G  I  L  C  M  C  Y  C  V  V  G  *  L  Q  *  E  L  V  Y  S  N  L  R  K  F  W  K  G  *  Q  G  L  V  *  Q  M  I  L  N  L  K  N  K  T  S  S  Q  *  *  M  K  Q  G  R :   S  D  Q  S  W  E  L  Q  H  L  Q  S  P  W  N  F  V  L  R  K  L  L  K  L  Y  M  C  V  A  M  E  G  I  *  L  M  K  K  M  K  N  C  *  V  P  C  L  M  L  S  F  L  Q  S  G  G  K  R  *  K  S  L  S  K  R  R  Q  R  E  W  Q  M  E  L  K  K  S  N  M  S  P  S  N  Y  Q  K  K  Q  F  R  C  K  *  K  T  L  N  F  L  S  K  T  V  *  I  S  E  A  *  N  L  S  S  F  L  K  *  I  L  G  T  G  D  *  H  Q  Q  E  D  Y  P  T  N  I  R  Y  R  K  S  Q  P  H  V  M  N  D  K  S  S  S  H  N  V  A  N  *  L  K  N  I  A  C  V  C  C  L  L  S  F  F  C  D  Q  S  A  F  S  T  C  T  *  K  I  *  W  L  *  F  V  F  K  N  Y  L  L  L  *  L  *  C  *  *  R  Q  S  H  V  E  N  E  *  T </second_frame>
            <third_frame>   I  S  K  Q  R  L  N  V  H  H  M  *  H  Y  G  G  C  L  L  S  P  L  S  F  F  F  L  L  H  L  L  *  L  N  L  S  L  S  S  L  L  S  T  F  L  Y  I  S  I  Q  K  K  *  F  Q  L  Q  W  R  C  G  L  A  R  Q  G  L  Y  G  *  D  H  K  S  N  F  *  F  C  *  *  G  H  R  F  T  A  C  F  W  S  H  S  Q  N  C  Q  *  G  R  W  C  W  R  R  F  Y  *  F  C  G  V  Q  E  A  S  R  *  Q  V  F  H  *  *  F  K  S  F  L  *  I  S  R  S  T  W  Q   : D  R  G  S  S  V  C  A  T  V  L  L  V  S  C  S  R  S  W  F  T  Q  I  *  G  N  F  G  R  G  S  K  A  *  F  S  K  *  Y  *  I  *  R  T  K  L  H  R  N  D  E  *  S  K  G   : E  A  I  K  V  G  S  S  S  T  Y  N  P  H  G  I  S  C  *  E  S  S  *  S  Y  T  C  V  L  L  W  K  G  S  D  *  *  R  R  *  K  T  A  K  Y  H  A  *  C  C  L  S  Y  S  R  A  A  K  G  R  N  H  C  Q  R  E  G  K  E  N  G  R  W  N  *  R  N  Q  I  *  A  Q  A  I  I  K  R  S  S  S  D  A  N  E  R  P  *  I  S  *  A  K  Q  F  E  S  V  R  H  E  I  Y  H  H  F  *  S  K  F  *  V  L  V  T  N  T  N  R  K  I  I  P  Q  T  F  G  I  G  N  H  S  H  M  S  *  M  T  N  L  L  R  T  M  S  P  T  N  *  K  T  L  H  V  Y  A  A  C  S  L  S  F  V  I  S  L  H  F  L  L  A  L  E  R  Y  S  G  S  D  L  Y  S  K  I  T  Y  Y  Y  N  C  N  V  N  D  D  S  L  T  S  K  M  S  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76071" stop="76463"/>
                    <exon start="76541" stop="76705"/>
                    <exon start="77179" stop="77499"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>876</number_coding_nucleotides>
                  <number_encoded_amino_acids>292</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSTTCNTMVVVSSLHSPSSSSSIYCNSISPSLRYFRRFYTFPSRRNNSNSNGGAVLLVKAYMDETTNPISSFANKVIGSLPVFGLIARIVNEEGGVGGDFIDFAEFRRRVGNKCSINDSRAFYEFRDRRGKTGDPLYVLLCCWLAAVGAGLLKSEEILEGVARLSLANDIEFEEQNFIAMMNEAREKRSKLGAPAPTIPMEFRAEKALEAIHVCCYGRDLIDEEDEKLLSTMLNAVFPTVGRQKVEIIVKEKAKRMADGTEEIKYEPKQLSKEAVQMQMKDLEFLKQNSLNQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="76050" e_stop="76463"/>
            <exon e_start="76541" e_stop="76705"/>
            <exon e_start="77179" e_stop="77730"/>
            <exon e_start="77930" e_stop="77937"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.925" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.875" e_score="0.996"/>
          <exon-only e_score="0.875"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="76050" e_stop="76463" e_length="414"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.925">
            <gDNA_intron_boundary i_start="76464" i_stop="76540" i_length="77"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="76541" e_stop="76705" e_length="165"/>
          </exon>
          <intron i_serial="2" don_prob="0.981" acc_prob="0.983">
            <gDNA_intron_boundary i_start="76706" i_stop="77178" i_length="473"/>
          </intron>
          <exon e_serial="3" e_score="0.996">
            <gDNA_exon_boundary e_start="77179" e_stop="77730" e_length="552"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.875">
            <gDNA_intron_boundary i_start="77731" i_stop="77929" i_length="199"/>
          </intron>
          <exon e_serial="4" e_score="0.875">
            <gDNA_exon_boundary e_start="77930" e_stop="77937" e_length="8"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76050" stop="76463"/>
              <exon start="76541" stop="76609"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265567" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76085" stop="76463"/>
              <exon start="76541" stop="76695"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278134" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76086" stop="76463"/>
              <exon start="76541" stop="76547"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292656" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76087" stop="76463"/>
              <exon start="76541" stop="76705"/>
              <exon start="77179" stop="77325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323187" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76088" stop="76463"/>
              <exon start="76541" stop="76705"/>
              <exon start="77179" stop="77365"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326835" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76095" stop="76463"/>
              <exon start="76541" stop="76582"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344756" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76097" stop="76463"/>
              <exon start="76541" stop="76705"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278752" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76100" stop="76463"/>
              <exon start="76541" stop="76637"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205441" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76102" stop="76463"/>
              <exon start="76541" stop="76705"/>
              <exon start="77179" stop="77368"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345335" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76111" stop="76463"/>
              <exon start="76541" stop="76705"/>
              <exon start="77179" stop="77261"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206443" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76111" stop="76463"/>
              <exon start="76541" stop="76705"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76129" stop="76463"/>
              <exon start="76541" stop="76705"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268185" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76139" stop="76463"/>
              <exon start="76541" stop="76705"/>
              <exon start="77179" stop="77366"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551165" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76139" stop="76463"/>
              <exon start="76541" stop="76705"/>
              <exon start="77179" stop="77347"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688982" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76139" stop="76463"/>
              <exon start="76541" stop="76690"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551326" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76139" stop="76463"/>
              <exon start="76541" stop="76690"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688683" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76140" stop="76463"/>
              <exon start="76541" stop="76705"/>
              <exon start="77179" stop="77261"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253860" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76140" stop="76463"/>
              <exon start="76541" stop="76644"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E263121" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76256" stop="76463"/>
              <exon start="76541" stop="76705"/>
              <exon start="77179" stop="77454"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370187" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76256" stop="76463"/>
              <exon start="76541" stop="76705"/>
              <exon start="77179" stop="77401"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271844" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76355" stop="76463"/>
              <exon start="76541" stop="76705"/>
              <exon start="77179" stop="77655"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346807" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76365" stop="76463"/>
              <exon start="76541" stop="76705"/>
              <exon start="77179" stop="77206"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296342" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77207" stop="77730"/>
              <exon start="77930" stop="77937"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E552015" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77466" stop="77711"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202904" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAATATCAAAACAAAGATTGAACGTCCACCACATGTAACACTATGGTGGTTGTCTCCTCTCTCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG : ACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAG : AAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTACCATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGCAAAAGGTAGAAATCATTGTCAAAGAGAAGGCAAAGAGAATGGCAGATGGAACTGAAGAAATCAAATATGAGCCCAAGCAATTATCAAAAGAAGCAGTTCAGATGCAAATGAAAGACCTTGAATTTCTTAAGCAAAACAGTTTGAATCAGTGAGGCATGAAATTTATCATCATTTTTAAAGTAAATTTTAGGTACTGGTGACTAACACCAACAGGAAGATTATCCCACAAACATTCGGTATAGGAAATCACAGCCACATGTCATGAATGACAAATCTTCTTCGCACAATGTCGCCAACTAATTAAAAAACATTGCATGTGTATGCTGCCTGCTCTCTTTCTTTTGTGATCAGTCTGCATTTTCTACTTGCACTTGAAAGATATA : ACAAAAAA</gDNA_template>
            <first_frame> K  Y  Q  N  K  D  *  T  S  T  T  C  N  T  M  V  V  V  S  S  L  H  S  P  S  S  S  S  S  I  Y  C  N  S  I  S  P  S  L  R  Y  F  R  R  F  Y  T  F  P  S  R  R  N  N  S  N  S  N  G  G  A  V  L  L  V  K  A  Y  M  D  E  T  T  N  P  I  S  S  F  A  N  K  V  I  G  S  L  P  V  F  G  L  I  A  R  I  V  N  E  E  G  G  V  G  G  D  F  I  D  F  A  E  F  R  R  R  V  G  N  K  C  S  I  N  D  S  R  A  F  Y  E  F  R  D  R  R  G  K  :  T  G  D  P  L  Y  V  L  L  C  C  W  L  A  A  V  G  A  G  L  L  K  S  E  E  I  L  E  G  V  A  R  L  S  L  A  N  D  I  E  F  E  E  Q  N  F  I  A  M  M  N  E  A  R  E  :  K  R  S  K  L  G  A  P  A  P  T  I  P  M  E  F  R  A  E  K  A  L  E  A  I  H  V  C  C  Y  G  R  D  L  I  D  E  E  D  E  K  L  L  S  T  M  L  N  A  V  F  P  T  V  G  R  Q  K  V  E  I  I  V  K  E  K  A  K  R  M  A  D  G  T  E  E  I  K  Y  E  P  K  Q  L  S  K  E  A  V  Q  M  Q  M  K  D  L  E  F  L  K  Q  N  S  L  N  Q  *  G  M  K  F  I  I  I  F  K  V  N  F  R  Y  W  *  L  T  P  T  G  R  L  S  H  K  H  S  V  *  E  I  T  A  T  C  H  E  *  Q  I  F  F  A  Q  C  R  Q  L  I  K  K  H  C  M  C  M  L  P  A  L  F  L  L  *  S  V  C  I  F  Y  L  H  L  K  D  I  :  T  K   </first_frame>
            <second_frame>  N  I  K  T  K  I  E  R  P  P  H  V  T  L  W  W  L  S  P  L  S  T  L  L  L  L  P  P  P  S  T  V  T  Q  S  L  P  L  F  V  T  F  D  V  S  I  H  F  H  P  E  E  I  I  P  T  P  M  A  V  R  S  C  S  S  R  L  I  W  M  R  P  Q  I  Q  F  L  V  L  L  I  R  S  S  V  H  C  L  F  L  V  S  *  P  E  L  S  M  R  K  V  V  L  E  A  I  L  L  I  L  R  S  S  G  G  E  S  V  T  S  V  P  L  M  I  Q  E  L  F  M  N  F  E  I  D  V  A  R :   Q  G  I  L  C  M  C  Y  C  V  V  G  *  L  Q  *  E  L  V  Y  S  N  L  R  K  F  W  K  G  *  Q  G  L  V  *  Q  M  I  L  N  L  K  N  K  T  S  S  Q  *  *  M  K  Q  G  R :   S  D  Q  S  W  E  L  Q  H  L  Q  S  P  W  N  F  V  L  R  K  L  L  K  L  Y  M  C  V  A  M  E  G  I  *  L  M  K  K  M  K  N  C  *  V  P  C  L  M  L  S  F  L  Q  S  G  G  K  R  *  K  S  L  S  K  R  R  Q  R  E  W  Q  M  E  L  K  K  S  N  M  S  P  S  N  Y  Q  K  K  Q  F  R  C  K  *  K  T  L  N  F  L  S  K  T  V  *  I  S  E  A  *  N  L  S  S  F  L  K  *  I  L  G  T  G  D  *  H  Q  Q  E  D  Y  P  T  N  I  R  Y  R  K  S  Q  P  H  V  M  N  D  K  S  S  S  H  N  V  A  N  *  L  K  N  I  A  C  V  C  C  L  L  S  F  F  C  D  Q  S  A  F  S  T  C  T  *  K  I  * :   Q  K  </second_frame>
            <third_frame>   I  S  K  Q  R  L  N  V  H  H  M  *  H  Y  G  G  C  L  L  S  P  L  S  F  F  F  L  L  H  L  L  *  L  N  L  S  L  S  S  L  L  S  T  F  L  Y  I  S  I  Q  K  K  *  F  Q  L  Q  W  R  C  G  L  A  R  Q  G  L  Y  G  *  D  H  K  S  N  F  *  F  C  *  *  G  H  R  F  T  A  C  F  W  S  H  S  Q  N  C  Q  *  G  R  W  C  W  R  R  F  Y  *  F  C  G  V  Q  E  A  S  R  *  Q  V  F  H  *  *  F  K  S  F  L  *  I  S  R  S  T  W  Q   : D  R  G  S  S  V  C  A  T  V  L  L  V  S  C  S  R  S  W  F  T  Q  I  *  G  N  F  G  R  G  S  K  A  *  F  S  K  *  Y  *  I  *  R  T  K  L  H  R  N  D  E  *  S  K  G   : E  A  I  K  V  G  S  S  S  T  Y  N  P  H  G  I  S  C  *  E  S  S  *  S  Y  T  C  V  L  L  W  K  G  S  D  *  *  R  R  *  K  T  A  K  Y  H  A  *  C  C  L  S  Y  S  R  A  A  K  G  R  N  H  C  Q  R  E  G  K  E  N  G  R  W  N  *  R  N  Q  I  *  A  Q  A  I  I  K  R  S  S  S  D  A  N  E  R  P  *  I  S  *  A  K  Q  F  E  S  V  R  H  E  I  Y  H  H  F  *  S  K  F  *  V  L  V  T  N  T  N  R  K  I  I  P  Q  T  F  G  I  G  N  H  S  H  M  S  *  M  T  N  L  L  R  T  M  S  P  T  N  *  K  T  L  H  V  Y  A  A  C  S  L  S  F  V  I  S  L  H  F  L  L  A  L  E  R  Y   : N  K  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="15" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76071" stop="76463"/>
                    <exon start="76541" stop="76705"/>
                    <exon start="77179" stop="77499"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>876</number_coding_nucleotides>
                  <number_encoded_amino_acids>292</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSTTCNTMVVVSSLHSPSSSSSIYCNSISPSLRYFRRFYTFPSRRNNSNSNGGAVLLVKAYMDETTNPISSFANKVIGSLPVFGLIARIVNEEGGVGGDFIDFAEFRRRVGNKCSINDSRAFYEFRDRRGKTGDPLYVLLCCWLAAVGAGLLKSEEILEGVARLSLANDIEFEEQNFIAMMNEAREKRSKLGAPAPTIPMEFRAEKALEAIHVCCYGRDLIDEEDEKLLSTMLNAVFPTVGRQKVEIIVKEKAKRMADGTEEIKYEPKQLSKEAVQMQMKDLEFLKQNSLNQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="77059" PGL_stop="76600"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="77059" e_stop="76600"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="77059" e_stop="76600" e_length="460"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77059" stop="76600"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367370" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGCTAAATCTAATGAAGCCCGTAATGGGATAGCTGCAAACATAAATTTACTCGATATACTATTGTAAGCAAGCTTCCCAATAAGAGTTAGGCAGAGCTATGCTGCTTGAATCGTCCAAGAATACTGTCTGCATGTGTCGATACTCTAAAATATATGCAGTTTTGGAGGATTCGAACAACATGGAGGCAGAGTTCTAAGTACCACATCAAAAGAATGAAGCATAAACAGAAGTTGAAGTATGCCTCAAAGACAGTATCCGAGTAAGTATGCTATAAATTTACTGATAAGCATTGAAAGTAAGGTAACATAAATGAAAAGAAGCTAAAAATCGTTGGCAAATGAAATCTTACGAACCTCCCTTGCTTCATTCATCATTGCGATGAAGTTTTGTTCTTCAAATTCAATATCATTTGCTAAACTAAGCCTTGCTACCCCTTCCAAAATTTCCTCAGATTTGAGT</gDNA_template>
            <first_frame> C  *  I  *  *  S  P  *  W  D  S  C  K  H  K  F  T  R  Y  T  I  V  S  K  L  P  N  K  S  *  A  E  L  C  C  L  N  R  P  R  I  L  S  A  C  V  D  T  L  K  Y  M  Q  F  W  R  I  R  T  T  W  R  Q  S  S  K  Y  H  I  K  R  M  K  H  K  Q  K  L  K  Y  A  S  K  T  V  S  E  *  V  C  Y  K  F  T  D  K  H  *  K  *  G  N  I  N  E  K  K  L  K  I  V  G  K  *  N  L  T  N  L  P  C  F  I  H  H  C  D  E  V  L  F  F  K  F  N  I  I  C  *  T  K  P  C  Y  P  F  Q  N  F  L  R  F  E  </first_frame>
            <second_frame>  A  K  S  N  E  A  R  N  G  I  A  A  N  I  N  L  L  D  I  L  L  *  A  S  F  P  I  R  V  R  Q  S  Y  A  A  *  I  V  Q  E  Y  C  L  H  V  S  I  L  *  N  I  C  S  F  G  G  F  E  Q  H  G  G  R  V  L  S  T  T  S  K  E  *  S  I  N  R  S  *  S  M  P  Q  R  Q  Y  P  S  K  Y  A  I  N  L  L  I  S  I  E  S  K  V  T  *  M  K  R  S  *  K  S  L  A  N  E  I  L  R  T  S  L  A  S  F  I  I  A  M  K  F  C  S  S  N  S  I  S  F  A  K  L  S  L  A  T  P  S  K  I  S  S  D  L  S </second_frame>
            <third_frame>   L  N  L  M  K  P  V  M  G  *  L  Q  T  *  I  Y  S  I  Y  Y  C  K  Q  A  S  Q  *  E  L  G  R  A  M  L  L  E  S  S  K  N  T  V  C  M  C  R  Y  S  K  I  Y  A  V  L  E  D  S  N  N  M  E  A  E  F  *  V  P  H  Q  K  N  E  A  *  T  E  V  E  V  C  L  K  D  S  I  R  V  S  M  L  *  I  Y  *  *  A  L  K  V  R  *  H  K  *  K  E  A  K  N  R  W  Q  M  K  S  Y  E  P  P  L  L  H  S  S  L  R  *  S  F  V  L  Q  I  Q  Y  H  L  L  N  *  A  L  L  P  L  P  K  F  P  Q  I  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0016A12.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="77730" PGL_stop="77466"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="77730" e_stop="77466"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.928"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.928">
            <gDNA_exon_boundary e_start="77730" e_stop="77466" e_length="265"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77730" stop="77466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281267" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATATCTTTCAAGTGCAAGTAGAAAATGCAGACTGATCACAAAAGAAAGAGAGCAGGCAGCATACACATGCAATGTTTTTTAATTAGTTGGCGACATTGTGCGAAGAAGATTTGTCATTCATGACATGTGGCTGTGATTTCCTATACCGAATGTTTGTGGGATAATCTTCCTGTTGGTGTTAGTCACCAGTACCTAAAATTTACTTTAAAAATGATGATAAATTTCATGCCTCACTGATTCAAACTGTTTTGCTTAAGAAATTCA</gDNA_template>
            <first_frame> Y  I  F  Q  V  Q  V  E  N  A  D  *  S  Q  K  K  E  S  R  Q  H  T  H  A  M  F  F  N  *  L  A  T  L  C  E  E  D  L  S  F  M  T  C  G  C  D  F  L  Y  R  M  F  V  G  *  S  S  C  W  C  *  S  P  V  P  K  I  Y  F  K  N  D  D  K  F  H  A  S  L  I  Q  T  V  L  L  K  K  F  </first_frame>
            <second_frame>  I  S  F  K  C  K  *  K  M  Q  T  D  H  K  R  K  R  A  G  S  I  H  M  Q  C  F  L  I  S  W  R  H  C  A  K  K  I  C  H  S  *  H  V  A  V  I  S  Y  T  E  C  L  W  D  N  L  P  V  G  V  S  H  Q  Y  L  K  F  T  L  K  M  M  I  N  F  M  P  H  *  F  K  L  F  C  L  R  N  S </second_frame>
            <third_frame>   Y  L  S  S  A  S  R  K  C  R  L  I  T  K  E  R  E  Q  A  A  Y  T  C  N  V  F  *  L  V  G  D  I  V  R  R  R  F  V  I  H  D  M  W  L  *  F  P  I  P  N  V  C  G  I  I  F  L  L  V  L  V  T  S  T  *  N  L  L  *  K  *  *  *  I  S  C  L  T  D  S  N  C  F  A  *  E  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0016A12.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="82773" PGL_stop="78112"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82773" e_stop="82533"/>
            <exon e_start="81372" e_stop="81201"/>
            <exon e_start="80457" e_stop="79917"/>
            <exon e_start="79175" e_stop="79051"/>
            <exon e_start="78815" e_stop="78703"/>
            <exon e_start="78591" e_stop="78171"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.768" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.989" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="82773" e_stop="82533" e_length="241"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="81372" e_stop="81201" e_length="172"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.987">
            <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="80457" e_stop="79917" e_length="541"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.768">
            <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="79175" e_stop="79051" e_length="125"/>
          </exon>
          <intron i_serial="4" don_prob="0.983" acc_prob="0.964">
            <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="78815" e_stop="78703" e_length="113"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.989">
            <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="78591" e_stop="78171" e_length="421"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82773" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80037"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E721018" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82762" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747059" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82759" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E721102" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82757" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80298"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202248" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82734" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80043"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329089" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82734" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325708" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82733" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306010" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82684" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80227"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275589" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82683" stop="82533"/>
              <exon start="81372" stop="81289"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338733" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82682" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82682" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80221"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270090" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82682" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80225"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335622" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82682" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232047" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82682" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80288"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284248" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82682" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80300"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317598" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82682" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80359"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336580" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82682" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80409"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82682" stop="82533"/>
              <exon start="81372" stop="81290"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339737" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82681" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="79917"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702568" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82681" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82681" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80135"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202311" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82681" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213170" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82681" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80211"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299312" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82681" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80315"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270719" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82680" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80261"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82680" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80288"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334813" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82680" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80377"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367392" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82679" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="79955"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703584" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82679" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80234"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208144" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82679" stop="82533"/>
              <exon start="81372" stop="81201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205702" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82679" stop="82533"/>
              <exon start="81372" stop="81227"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204751" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82678" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="79917"/>
              <exon start="79175" stop="79122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703103" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82678" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80018"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704572" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82678" stop="82533"/>
              <exon start="81372" stop="81220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274128" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82677" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327943" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82677" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80234"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300736" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82677" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266897" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82677" stop="82533"/>
              <exon start="81372" stop="81349"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82676" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80135"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82676" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80138"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248368" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82676" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212414" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82676" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80207"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205437" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82676" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80221"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204321" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82676" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80221"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246872" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82676" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80256"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246304" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82676" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80261"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247734" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82676" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80283"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201817" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82676" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80309"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245040" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82676" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80311"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240654" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82676" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80315"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245157" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82676" stop="82533"/>
              <exon start="81372" stop="81201"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275211" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80121" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78556"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336433" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80119" stop="79917"/>
              <exon start="79175" stop="79054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247482" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80054" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78399"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268988" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79987" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78181"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353122" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79987" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78194"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349959" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79987" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78250"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350172" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79957" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78185"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79946" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78257"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242912" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79946" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78288"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243545" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79946" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78290"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240060" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79946" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78397"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242655" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79946" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78462"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242080" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79946" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78498"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240970" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79946" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78788"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233512" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79945" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78209"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353837" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79945" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78491"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238057" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79172" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78200"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337036" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79115" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78236"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269085" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79074" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78171"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249185" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79062" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78186"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297153" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78802" stop="78703"/>
              <exon start="78591" stop="78249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241436" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78802" stop="78703"/>
              <exon start="78591" stop="78292"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243444" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78786" stop="78703"/>
              <exon start="78591" stop="78187"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232459" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78784" stop="78703"/>
              <exon start="78591" stop="78205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267323" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78545" stop="78187"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232383" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGAGTTGAAGCAGGTCGCTTCTAAGTACTGGGCCTTCGCCCTTTCCTATAAAAAGCCGTTACGTCTCTCCAGTAAGTCATCTCAGCCAACTGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG : GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG : AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA : AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG : GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG : TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAATTATCTTCTTGTTTGCTAGTATTTGTTGCA</gDNA_template>
            <first_frame> W  S  *  S  R  S  L  L  S  T  G  P  S  P  F  P  I  K  S  R  Y  V  S  P  V  S  H  L  S  Q  L  E  F  I  L  L  S  V  F  S  K  Y  E  T  L  F  C  K  S  K  K  N  S  D  G  D  E  A  C  S  F  Y  S  S  S  C  Y  C  F  T  F  I  L  S  F  Y  Q  R  T  S   : G  F  P  W  P  Q  K  D  C  G  C  F  L  Q  S  K  *  I  C  *  N  E  P  Q  L  F  G  L  C  R  K  C  L  G  D  T  *  M  V  R  V  *  R  S  S  V  H  S  H  S  *  Q  R  R  T  R  L  * :   A  *  E  T  H  S  *  S  P  C  V  D  F  D  P  F  S  S  C  L  C  H  G  *  K  D  Q  E  G  K  K  S  T  T  S  A  D  S  W  N  W  I  R  S  C  *  S  E  S  C  C  C  C  W  I  D  S  S  R  G  H  W  K  Q  Y  C  L  S  C  G  R  *  T  D  A  N  L  N  S  C  P  K  F  L  T  W  T  S  S  G  Y  Q  W  G  V  E  C  C  C  N  C  A  Q  S  L  *  F  G  R  Q  D  C  W  N  C  W  C  R  T  Y  W  Q  T  F  T  P  A  I  E  A  I  *  L  *  S  T  L  P  *  P  S  *  D  G  F  *  A  R  E  S  N  W  S  K  V  *  G  R  S  R  *  D  A  L  E  M  *  H  S  G  H  Q  Y  A  S  Y  R  E  N  K  :  R  N  V  *  Q  G  K  N  C  K  V  E  E  G  S  S  N  C  K  Q  C  S  R  S  N  Y  G  H  S  S  S  C  *  C  L  *  Q  R  S  Y  C  R :   I  Q  W  R  C  L  V  P  T  T  S  S  Q  G  P  S  M  A  L  H  A  K  P  S  Y  D  S  S  H  F  W  D  Y  H  *  C  T   : V  E  V  C  S  W  N  K  G  Y  V  G  Q  V  L  Q  G  *  G  F  P  C  *  K  L  H  C  Q  G  W  G  I  G  T  S  V  S  L  N  Y  L  C  I  E  L  C  L  D  F  C  V  K  *  T  G  K  P  C  L  Q  *  A  D  K  I  G  Y  F  M  F  F  *  N  S  N  A  V  F  L  R  V  S  C  N  F  C  D  G  N  I  C  P  L  L  *  W  R  S  M  Y  D  P  P  V  S  F  L  S  L  *  L  N  F  L  A  V  V  V  V  L  V  F  L  D  I  L  C  F  K  K  N  Y  L  L  V  C  *  Y  L  L   </first_frame>
            <second_frame>  G  V  E  A  G  R  F  *  V  L  G  L  R  P  F  L  *  K  A  V  T  S  L  Q  *  V  I  S  A  N  W  S  L  F  F  S  L  F  L  V  S  T  K  P  F  S  V  N  P  K  K  I  P  M  A  M  R  R  V  A  S  T  A  A  R  A  I  A  S  P  S  S  L  V  F  T  R  E  L  Q  :  A  S  P  G  P  K  K  I  V  G  V  F  Y  K  A  N  E  Y  A  E  M  N  P  N  F  L  G  C  A  E  N  A  L  G  I  R  E  W  L  E  S  K  G  H  Q  Y  I  V  T  P  D  K  E  G  P  D  C   : E  L  E  K  H  I  P  D  L  H  V  L  I  S  T  P  F  H  P  A  Y  V  T  A  E  R  I  K  K  A  K  N  L  Q  L  L  L  T  A  G  I  G  S  D  H  V  D  L  K  A  A  A  A  A  G  L  T  V  A  E  V  T  G  S  N  T  V  S  V  A  E  D  E  L  M  R  I  L  I  L  V  R  N  F  L  P  G  H  H  Q  V  I  N  G  E  W  N  V  A  A  I  A  H  R  A  Y  D  L  E  G  K  T  V  G  T  V  G  A  G  R  I  G  R  L  L  L  Q  R  L  K  P  F  N  C  N  L  L  Y  H  D  R  L  K  M  D  S  E  L  E  N  Q  I  G  A  K  F  E  E  D  L  D  K  M  L  S  K  C  D  I  V  V  I  N  T  P  L  T  E  K  T  K :   G  M  F  D  K  E  R  I  A  K  L  K  K  G  V  L  I  V  N  N  A  R  G  A  I  M  D  T  Q  A  V  V  D  A  C  N  S  G  H  I  A   : G  Y  S  G  D  V  W  Y  P  Q  P  A  P  K  D  H  L  W  R  Y  M  P  N  Q  A  M  T  P  H  I  S  G  T  T  I  D  A  Q  :  L  R  Y  A  A  G  T  K  D  M  L  D  R  Y  F  K  G  E  D  F  P  A  E  N  Y  I  V  K  D  G  E  L  A  P  Q  Y  R  *  I  I  Y  V  *  S  C  V  *  I  S  V  L  N  K  L  A  S  R  V  F  N  K  L  I  K  L  A  T  L  C  S  S  R  T  L  M  Q  F  F  S  G  L  A  V  T  F  V  M  E  T  Y  V  L  F  C  D  G  G  L  C  M  I  L  Q  C  L  S  *  V  Y  N  *  T  S  L  L  W  *  L  Y  W  C  S  W  T  F  Y  V  L  K  K  I  I  F  L  F  A  S  I  C  C  </second_frame>
            <third_frame>   E  L  K  Q  V  A  S  K  Y  W  A  F  A  L  S  Y  K  K  P  L  R  L  S  S  K  S  S  Q  P  T  G  V  Y  S  S  L  C  F  *  *  V  R  N  P  F  L  *  I  Q  K  K  F  R  W  R  *  G  V  *  L  L  Q  Q  L  V  L  L  L  H  L  H  P  *  F  L  P  E  N  F  R :   L  P  L  A  P  K  R  L  W  V  F  S  T  K  Q  M  N  M  L  K  *  T  P  T  F  W  A  V  Q  K  M  P  W  G  Y  V  N  G  *  S  L  K  V  I  S  T  *  S  L  L  T  K  K  D  Q  I  V  :  S  L  R  N  T  F  L  I  S  M  C  *  F  R  P  L  F  I  L  P  M  S  R  L  K  G  S  R  R  Q  K  I  Y  N  F  C  *  Q  L  E  L  D  Q  I  M  L  I  *  K  L  L  L  L  L  D  *  Q  *  Q  R  S  L  E  A  I  L  S  Q  L  R  K  M  N  *  C  E  S  *  F  L  S  E  I  S  Y  L  D  I  I  R  L  S  M  G  S  G  M  L  L  Q  L  R  T  E  L  M  I  W  K  A  R  L  L  E  L  L  V  Q  D  V  L  A  D  F  Y  S  S  D  *  S  H  L  T  V  I  Y  F  T  M  T  V  L  R  W  I  L  S  *  R  I  K  L  E  Q  S  L  R  K  I  S  I  R  C  S  R  N  V  T  *  W  S  S  I  R  L  L  Q  R  K  Q   : K  E  C  L  T  R  K  E  L  Q  S  *  R  R  E  F  *  L  *  T  M  L  E  E  Q  L  W  T  L  K  Q  L  L  M  L  V  T  A  V  I  L  Q  :  D  T  V  E  M  F  G  T  H  N  Q  L  P  R  T  I  Y  G  V  T  C  Q  T  K  L  *  L  L  T  F  L  G  L  P  L  M  H  S :   *  G  M  Q  L  E  Q  R  I  C  W  T  G  T  S  R  V  R  I  S  L  L  K  I  T  L  S  R  M  G  N  W  H  L  S  I  A  K  L  F  M  Y  R  V  V  S  R  F  L  C  *  I  N  W  Q  A  V  S  S  I  S  *  *  N  W  L  L  Y  V  L  L  E  L  *  C  S  F  S  P  G  *  L  *  L  L  *  W  K  H  M  S  S  S  V  M  E  V  Y  V  *  S  S  S  V  F  L  E  S  I  T  E  L  P  C  C  G  S  C  T  G  V  P  G  H  F  M  F  *  K  K  L  S  S  C  L  L  V  F  V  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82697" stop="82533"/>
                    <exon start="81372" stop="81201"/>
                    <exon start="80457" stop="79917"/>
                    <exon start="79175" stop="79051"/>
                    <exon start="78815" stop="78703"/>
                    <exon start="78591" stop="78478"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1227</number_coding_nucleotides>
                  <number_encoded_amino_acids>409</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VISANWSLFFSLFLVSTKPFSVNPKKIPMAMRRVASTAARAIASPSSLVFTRELQASPGPKKIVGVFYKANEYAEMNPNFLGCAENALGIREWLESKGHQYIVTPDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGIGSDHVDLKAAAAAGLTVAEVTGSNTVSVAEDELMRILILVRNFLPGHHQVINGEWNVAAIAHRAYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDSELENQIGAKFEEDLDKMLSKCDIVVINTPLTEKTKGMFDKERIAKLKKGVLIVNNARGAIMDTQAVVDACNSGHIAGYSGDVWYPQPAPKDHLWRYMPNQAMTPHISGTTIDAQLRYAAGTKDMLDRYFKGEDFPAENYIVKDGELAPQYR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="82773" e_stop="82533"/>
            <exon e_start="81372" e_stop="81201"/>
            <exon e_start="80457" e_stop="79917"/>
            <exon e_start="79175" e_stop="79051"/>
            <exon e_start="78815" e_stop="78703"/>
            <exon e_start="78591" e_stop="78242"/>
            <exon e_start="78139" e_stop="78112"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.768" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.321" e_score="1.000"/>
          <exon-only e_score="0.607"/>
        </SCR_line>
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              <exon start="78591" stop="78242"/>
              <exon start="78139" stop="78112"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E552969" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78802" stop="78703"/>
              <exon start="78591" stop="78249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241436" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78802" stop="78703"/>
              <exon start="78591" stop="78292"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243444" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGAGTTGAAGCAGGTCGCTTCTAAGTACTGGGCCTTCGCCCTTTCCTATAAAAAGCCGTTACGTCTCTCCAGTAAGTCATCTCAGCCAACTGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG : GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG : AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA : AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG : GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG : TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTA : GAAAAACTTGGCAAAAATAATGAAATGA</gDNA_template>
            <first_frame> W  S  *  S  R  S  L  L  S  T  G  P  S  P  F  P  I  K  S  R  Y  V  S  P  V  S  H  L  S  Q  L  E  F  I  L  L  S  V  F  S  K  Y  E  T  L  F  C  K  S  K  K  N  S  D  G  D  E  A  C  S  F  Y  S  S  S  C  Y  C  F  T  F  I  L  S  F  Y  Q  R  T  S   : G  F  P  W  P  Q  K  D  C  G  C  F  L  Q  S  K  *  I  C  *  N  E  P  Q  L  F  G  L  C  R  K  C  L  G  D  T  *  M  V  R  V  *  R  S  S  V  H  S  H  S  *  Q  R  R  T  R  L  * :   A  *  E  T  H  S  *  S  P  C  V  D  F  D  P  F  S  S  C  L  C  H  G  *  K  D  Q  E  G  K  K  S  T  T  S  A  D  S  W  N  W  I  R  S  C  *  S  E  S  C  C  C  C  W  I  D  S  S  R  G  H  W  K  Q  Y  C  L  S  C  G  R  *  T  D  A  N  L  N  S  C  P  K  F  L  T  W  T  S  S  G  Y  Q  W  G  V  E  C  C  C  N  C  A  Q  S  L  *  F  G  R  Q  D  C  W  N  C  W  C  R  T  Y  W  Q  T  F  T  P  A  I  E  A  I  *  L  *  S  T  L  P  *  P  S  *  D  G  F  *  A  R  E  S  N  W  S  K  V  *  G  R  S  R  *  D  A  L  E  M  *  H  S  G  H  Q  Y  A  S  Y  R  E  N  K  :  R  N  V  *  Q  G  K  N  C  K  V  E  E  G  S  S  N  C  K  Q  C  S  R  S  N  Y  G  H  S  S  S  C  *  C  L  *  Q  R  S  Y  C  R :   I  Q  W  R  C  L  V  P  T  T  S  S  Q  G  P  S  M  A  L  H  A  K  P  S  Y  D  S  S  H  F  W  D  Y  H  *  C  T   : V  E  V  C  S  W  N  K  G  Y  V  G  Q  V  L  Q  G  *  G  F  P  C  *  K  L  H  C  Q  G  W  G  I  G  T  S  V  S  L  N  Y  L  C  I  E  L  C  L  D  F  C  V  K  *  T  G  K  P  C  L  Q  *  A  D  K  I  G  Y  F  M  F  F  *  N  S  N  A  V  F  L  R  V  S  C  N  F  C  D  G  N  I  C  P  L  L  *  W  R  S  M  Y  D  P  P  V  S  F  L  S  L  *  L  N  F  L  A  V  V  :  E  K  L  G  K  N  N  E  M  </first_frame>
            <second_frame>  G  V  E  A  G  R  F  *  V  L  G  L  R  P  F  L  *  K  A  V  T  S  L  Q  *  V  I  S  A  N  W  S  L  F  F  S  L  F  L  V  S  T  K  P  F  S  V  N  P  K  K  I  P  M  A  M  R  R  V  A  S  T  A  A  R  A  I  A  S  P  S  S  L  V  F  T  R  E  L  Q  :  A  S  P  G  P  K  K  I  V  G  V  F  Y  K  A  N  E  Y  A  E  M  N  P  N  F  L  G  C  A  E  N  A  L  G  I  R  E  W  L  E  S  K  G  H  Q  Y  I  V  T  P  D  K  E  G  P  D  C   : E  L  E  K  H  I  P  D  L  H  V  L  I  S  T  P  F  H  P  A  Y  V  T  A  E  R  I  K  K  A  K  N  L  Q  L  L  L  T  A  G  I  G  S  D  H  V  D  L  K  A  A  A  A  A  G  L  T  V  A  E  V  T  G  S  N  T  V  S  V  A  E  D  E  L  M  R  I  L  I  L  V  R  N  F  L  P  G  H  H  Q  V  I  N  G  E  W  N  V  A  A  I  A  H  R  A  Y  D  L  E  G  K  T  V  G  T  V  G  A  G  R  I  G  R  L  L  L  Q  R  L  K  P  F  N  C  N  L  L  Y  H  D  R  L  K  M  D  S  E  L  E  N  Q  I  G  A  K  F  E  E  D  L  D  K  M  L  S  K  C  D  I  V  V  I  N  T  P  L  T  E  K  T  K :   G  M  F  D  K  E  R  I  A  K  L  K  K  G  V  L  I  V  N  N  A  R  G  A  I  M  D  T  Q  A  V  V  D  A  C  N  S  G  H  I  A   : G  Y  S  G  D  V  W  Y  P  Q  P  A  P  K  D  H  L  W  R  Y  M  P  N  Q  A  M  T  P  H  I  S  G  T  T  I  D  A  Q  :  L  R  Y  A  A  G  T  K  D  M  L  D  R  Y  F  K  G  E  D  F  P  A  E  N  Y  I  V  K  D  G  E  L  A  P  Q  Y  R  *  I  I  Y  V  *  S  C  V  *  I  S  V  L  N  K  L  A  S  R  V  F  N  K  L  I  K  L  A  T  L  C  S  S  R  T  L  M  Q  F  F  S  G  L  A  V  T  F  V  M  E  T  Y  V  L  F  C  D  G  G  L  C  M  I  L  Q  C  L  S  *  V  Y  N  *  T  S  L  L  W  * :   K  N  L  A  K  I  M  K  * </second_frame>
            <third_frame>   E  L  K  Q  V  A  S  K  Y  W  A  F  A  L  S  Y  K  K  P  L  R  L  S  S  K  S  S  Q  P  T  G  V  Y  S  S  L  C  F  *  *  V  R  N  P  F  L  *  I  Q  K  K  F  R  W  R  *  G  V  *  L  L  Q  Q  L  V  L  L  L  H  L  H  P  *  F  L  P  E  N  F  R :   L  P  L  A  P  K  R  L  W  V  F  S  T  K  Q  M  N  M  L  K  *  T  P  T  F  W  A  V  Q  K  M  P  W  G  Y  V  N  G  *  S  L  K  V  I  S  T  *  S  L  L  T  K  K  D  Q  I  V  :  S  L  R  N  T  F  L  I  S  M  C  *  F  R  P  L  F  I  L  P  M  S  R  L  K  G  S  R  R  Q  K  I  Y  N  F  C  *  Q  L  E  L  D  Q  I  M  L  I  *  K  L  L  L  L  L  D  *  Q  *  Q  R  S  L  E  A  I  L  S  Q  L  R  K  M  N  *  C  E  S  *  F  L  S  E  I  S  Y  L  D  I  I  R  L  S  M  G  S  G  M  L  L  Q  L  R  T  E  L  M  I  W  K  A  R  L  L  E  L  L  V  Q  D  V  L  A  D  F  Y  S  S  D  *  S  H  L  T  V  I  Y  F  T  M  T  V  L  R  W  I  L  S  *  R  I  K  L  E  Q  S  L  R  K  I  S  I  R  C  S  R  N  V  T  *  W  S  S  I  R  L  L  Q  R  K  Q   : K  E  C  L  T  R  K  E  L  Q  S  *  R  R  E  F  *  L  *  T  M  L  E  E  Q  L  W  T  L  K  Q  L  L  M  L  V  T  A  V  I  L  Q  :  D  T  V  E  M  F  G  T  H  N  Q  L  P  R  T  I  Y  G  V  T  C  Q  T  K  L  *  L  L  T  F  L  G  L  P  L  M  H  S :   *  G  M  Q  L  E  Q  R  I  C  W  T  G  T  S  R  V  R  I  S  L  L  K  I  T  L  S  R  M  G  N  W  H  L  S  I  A  K  L  F  M  Y  R  V  V  S  R  F  L  C  *  I  N  W  Q  A  V  S  S  I  S  *  *  N  W  L  L  Y  V  L  L  E  L  *  C  S  F  S  P  G  *  L  *  L  L  *  W  K  H  M  S  S  S  V  M  E  V  Y  V  *  S  S  S  V  F  L  E  S  I  T  E  L  P  C  C  G   : R  K  T  W  Q  K  *  *  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="-"/>
                <serials PGL_serial="18" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82697" stop="82533"/>
                    <exon start="81372" stop="81201"/>
                    <exon start="80457" stop="79917"/>
                    <exon start="79175" stop="79051"/>
                    <exon start="78815" stop="78703"/>
                    <exon start="78591" stop="78478"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1227</number_coding_nucleotides>
                  <number_encoded_amino_acids>409</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VISANWSLFFSLFLVSTKPFSVNPKKIPMAMRRVASTAARAIASPSSLVFTRELQASPGPKKIVGVFYKANEYAEMNPNFLGCAENALGIREWLESKGHQYIVTPDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGIGSDHVDLKAAAAAGLTVAEVTGSNTVSVAEDELMRILILVRNFLPGHHQVINGEWNVAAIAHRAYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDSELENQIGAKFEEDLDKMLSKCDIVVINTPLTEKTKGMFDKERIAKLKKGVLIVNNARGAIMDTQAVVDACNSGHIAGYSGDVWYPQPAPKDHLWRYMPNQAMTPHISGTTIDAQLRYAAGTKDMLDRYFKGEDFPAENYIVKDGELAPQYR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="82773" e_stop="82533"/>
            <exon e_start="81372" e_stop="81201"/>
            <exon e_start="80457" e_stop="79917"/>
            <exon e_start="79175" e_stop="78893"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.768" e_score="1.000"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="82773" e_stop="82533" e_length="241"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="82532" i_stop="81373" i_length="1160"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="81372" e_stop="81201" e_length="172"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.987">
            <gDNA_intron_boundary i_start="81200" i_stop="80458" i_length="743"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="80457" e_stop="79917" e_length="541"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.768">
            <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741"/>
          </intron>
          <exon e_serial="4" e_score="0.986">
            <gDNA_exon_boundary e_start="79175" e_stop="78893" e_length="283"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82773" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80037"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E721018" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82759" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E721102" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82757" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80298"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202248" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82734" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80043"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329089" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82734" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325708" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82733" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306010" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82684" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80227"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275589" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82683" stop="82533"/>
              <exon start="81372" stop="81289"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338733" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82682" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82682" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80221"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270090" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82682" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80225"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335622" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82682" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232047" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82682" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80288"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284248" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82682" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80300"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317598" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82682" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80359"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336580" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82682" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80409"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82682" stop="82533"/>
              <exon start="81372" stop="81290"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339737" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82681" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="79917"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702568" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82681" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82681" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80135"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202311" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82681" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213170" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82681" stop="82533"/>
              <exon start="81372" stop="81201"/>
              <exon start="80457" stop="80211"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299312" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
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              <exon start="80335" stop="79988"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720468" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80310" stop="79917"/>
              <exon start="79175" stop="79115"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E234283" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80288" stop="79917"/>
              <exon start="79175" stop="79115"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E234524" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80243" stop="79917"/>
              <exon start="79175" stop="79073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239661" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80243" stop="79917"/>
              <exon start="79175" stop="79113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242830" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80217" stop="79917"/>
              <exon start="79175" stop="79115"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E234038" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80206" stop="79917"/>
              <exon start="79175" stop="79109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240506" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80119" stop="79917"/>
              <exon start="79175" stop="79054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247482" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80073" stop="79917"/>
              <exon start="79175" stop="78893"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262678" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGAGTTGAAGCAGGTCGCTTCTAAGTACTGGGCCTTCGCCCTTTCCTATAAAAAGCCGTTACGTCTCTCCAGTAAGTCATCTCAGCCAACTGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG : GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG : AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA : AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTG</gDNA_template>
            <first_frame> W  S  *  S  R  S  L  L  S  T  G  P  S  P  F  P  I  K  S  R  Y  V  S  P  V  S  H  L  S  Q  L  E  F  I  L  L  S  V  F  S  K  Y  E  T  L  F  C  K  S  K  K  N  S  D  G  D  E  A  C  S  F  Y  S  S  S  C  Y  C  F  T  F  I  L  S  F  Y  Q  R  T  S   : G  F  P  W  P  Q  K  D  C  G  C  F  L  Q  S  K  *  I  C  *  N  E  P  Q  L  F  G  L  C  R  K  C  L  G  D  T  *  M  V  R  V  *  R  S  S  V  H  S  H  S  *  Q  R  R  T  R  L  * :   A  *  E  T  H  S  *  S  P  C  V  D  F  D  P  F  S  S  C  L  C  H  G  *  K  D  Q  E  G  K  K  S  T  T  S  A  D  S  W  N  W  I  R  S  C  *  S  E  S  C  C  C  C  W  I  D  S  S  R  G  H  W  K  Q  Y  C  L  S  C  G  R  *  T  D  A  N  L  N  S  C  P  K  F  L  T  W  T  S  S  G  Y  Q  W  G  V  E  C  C  C  N  C  A  Q  S  L  *  F  G  R  Q  D  C  W  N  C  W  C  R  T  Y  W  Q  T  F  T  P  A  I  E  A  I  *  L  *  S  T  L  P  *  P  S  *  D  G  F  *  A  R  E  S  N  W  S  K  V  *  G  R  S  R  *  D  A  L  E  M  *  H  S  G  H  Q  Y  A  S  Y  R  E  N  K  :  R  N  V  *  Q  G  K  N  C  K  V  E  E  G  S  S  N  C  K  Q  C  S  R  S  N  Y  G  H  S  S  S  C  *  C  L  *  Q  R  S  Y  C  R  Y  F  N  I  T  *  T  H  H  P  E  M  S  P  Q  P  *  Y  Q  L  N  T  P  L  Y  F  F  L  Q  F  L  L  V  S  F  L  Q  Y  I  L  S  T  F  G  S  S  S  I  S  C  G  I  </first_frame>
            <second_frame>  G  V  E  A  G  R  F  *  V  L  G  L  R  P  F  L  *  K  A  V  T  S  L  Q  *  V  I  S  A  N  W  S  L  F  F  S  L  F  L  V  S  T  K  P  F  S  V  N  P  K  K  I  P  M  A  M  R  R  V  A  S  T  A  A  R  A  I  A  S  P  S  S  L  V  F  T  R  E  L  Q  :  A  S  P  G  P  K  K  I  V  G  V  F  Y  K  A  N  E  Y  A  E  M  N  P  N  F  L  G  C  A  E  N  A  L  G  I  R  E  W  L  E  S  K  G  H  Q  Y  I  V  T  P  D  K  E  G  P  D  C   : E  L  E  K  H  I  P  D  L  H  V  L  I  S  T  P  F  H  P  A  Y  V  T  A  E  R  I  K  K  A  K  N  L  Q  L  L  L  T  A  G  I  G  S  D  H  V  D  L  K  A  A  A  A  A  G  L  T  V  A  E  V  T  G  S  N  T  V  S  V  A  E  D  E  L  M  R  I  L  I  L  V  R  N  F  L  P  G  H  H  Q  V  I  N  G  E  W  N  V  A  A  I  A  H  R  A  Y  D  L  E  G  K  T  V  G  T  V  G  A  G  R  I  G  R  L  L  L  Q  R  L  K  P  F  N  C  N  L  L  Y  H  D  R  L  K  M  D  S  E  L  E  N  Q  I  G  A  K  F  E  E  D  L  D  K  M  L  S  K  C  D  I  V  V  I  N  T  P  L  T  E  K  T  K :   G  M  F  D  K  E  R  I  A  K  L  K  K  G  V  L  I  V  N  N  A  R  G  A  I  M  D  T  Q  A  V  V  D  A  C  N  S  G  H  I  A  G  I  L  T  *  L  E  H  I  I  Q  R  *  A  L  S  L  N  I  N  *  T  H  H  Y  I  F  F  F  N  S  C  L  F  L  F  F  N  I  F  Y  R  H  L  E  V  V  P  Y  L  V  E  L </second_frame>
            <third_frame>   E  L  K  Q  V  A  S  K  Y  W  A  F  A  L  S  Y  K  K  P  L  R  L  S  S  K  S  S  Q  P  T  G  V  Y  S  S  L  C  F  *  *  V  R  N  P  F  L  *  I  Q  K  K  F  R  W  R  *  G  V  *  L  L  Q  Q  L  V  L  L  L  H  L  H  P  *  F  L  P  E  N  F  R :   L  P  L  A  P  K  R  L  W  V  F  S  T  K  Q  M  N  M  L  K  *  T  P  T  F  W  A  V  Q  K  M  P  W  G  Y  V  N  G  *  S  L  K  V  I  S  T  *  S  L  L  T  K  K  D  Q  I  V  :  S  L  R  N  T  F  L  I  S  M  C  *  F  R  P  L  F  I  L  P  M  S  R  L  K  G  S  R  R  Q  K  I  Y  N  F  C  *  Q  L  E  L  D  Q  I  M  L  I  *  K  L  L  L  L  L  D  *  Q  *  Q  R  S  L  E  A  I  L  S  Q  L  R  K  M  N  *  C  E  S  *  F  L  S  E  I  S  Y  L  D  I  I  R  L  S  M  G  S  G  M  L  L  Q  L  R  T  E  L  M  I  W  K  A  R  L  L  E  L  L  V  Q  D  V  L  A  D  F  Y  S  S  D  *  S  H  L  T  V  I  Y  F  T  M  T  V  L  R  W  I  L  S  *  R  I  K  L  E  Q  S  L  R  K  I  S  I  R  C  S  R  N  V  T  *  W  S  S  I  R  L  L  Q  R  K  Q   : K  E  C  L  T  R  K  E  L  Q  S  *  R  R  E  F  *  L  *  T  M  L  E  E  Q  L  W  T  L  K  Q  L  L  M  L  V  T  A  V  I  L  Q  V  F  *  H  N  L  N  T  S  S  R  D  E  P  S  A  L  I  S  I  E  H  T  I  I  F  F  S  S  I  L  A  C  F  F  S  S  I  Y  F  I  D  I  W  K  *  F  H  I  L  W  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="-"/>
                <serials PGL_serial="18" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82697" stop="82533"/>
                    <exon start="81372" stop="81201"/>
                    <exon start="80457" stop="79917"/>
                    <exon start="79175" stop="79037"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1014</number_coding_nucleotides>
                  <number_encoded_amino_acids>338</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VISANWSLFFSLFLVSTKPFSVNPKKIPMAMRRVASTAARAIASPSSLVFTRELQASPGPKKIVGVFYKANEYAEMNPNFLGCAENALGIREWLESKGHQYIVTPDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGIGSDHVDLKAAAAAGLTVAEVTGSNTVSVAEDELMRILILVRNFLPGHHQVINGEWNVAAIAHRAYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDSELENQIGAKFEEDLDKMLSKCDIVVINTPLTEKTKGMFDKERIAKLKKGVLIVNNARGAIMDTQAVVDACNSGHIAGILT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="80458" e_stop="79917"/>
            <exon e_start="79175" e_stop="79051"/>
            <exon e_start="78815" e_stop="78703"/>
            <exon e_start="78591" e_stop="78171"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.768" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.989" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="80458" e_stop="79917" e_length="542"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.768">
            <gDNA_intron_boundary i_start="79916" i_stop="79176" i_length="741"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="79175" e_stop="79051" e_length="125"/>
          </exon>
          <intron i_serial="2" don_prob="0.983" acc_prob="0.964">
            <gDNA_intron_boundary i_start="79050" i_stop="78816" i_length="235"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="78815" e_stop="78703" e_length="113"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.989">
            <gDNA_intron_boundary i_start="78702" i_stop="78592" i_length="111"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="78591" e_stop="78171" e_length="421"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80458" stop="80227"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239941" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80394" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78558"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332612" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80375" stop="79962"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206669" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80374" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78558"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261870" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80374" stop="79917"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258818" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80370" stop="80142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80356" stop="79917"/>
              <exon start="79175" stop="79115"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220993" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80344" stop="79917"/>
              <exon start="79175" stop="79115"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235196" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80342" stop="79917"/>
              <exon start="79175" stop="79145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323451" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80335" stop="79988"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720468" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80310" stop="79917"/>
              <exon start="79175" stop="79115"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E234283" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80297" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258539" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80294" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260604" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80288" stop="79917"/>
              <exon start="79175" stop="79115"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E234524" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80286" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78352"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708489" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80285" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78251"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E555030" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80285" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78314"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E552235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80285" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78467"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E553296" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80243" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78547"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233270" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80243" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78737"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80243" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78790"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240658" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80243" stop="79917"/>
              <exon start="79175" stop="79073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239661" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80243" stop="79917"/>
              <exon start="79175" stop="79113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242830" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80234" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289438" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80231" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78558"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710244" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80217" stop="79917"/>
              <exon start="79175" stop="79115"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E234038" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80206" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78728"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228246" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80206" stop="79917"/>
              <exon start="79175" stop="79109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240506" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80178" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78556"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265006" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80173" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78440"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311228" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80133" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276295" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80133" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78461"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80121" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78556"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336433" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80119" stop="79917"/>
              <exon start="79175" stop="79054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247482" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80054" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78399"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268988" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79987" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78181"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353122" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79987" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78194"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349959" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79987" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78250"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350172" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79957" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78185"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79946" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78257"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242912" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79946" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78288"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243545" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79946" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78290"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240060" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79946" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78397"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242655" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79946" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78462"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242080" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79946" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78498"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240970" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79946" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78788"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233512" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79945" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78209"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353837" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79945" stop="79917"/>
              <exon start="79175" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78491"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238057" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79172" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78200"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337036" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79115" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78236"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269085" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79074" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78171"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249185" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79062" stop="79051"/>
              <exon start="78815" stop="78703"/>
              <exon start="78591" stop="78186"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297153" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78802" stop="78703"/>
              <exon start="78591" stop="78249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241436" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78802" stop="78703"/>
              <exon start="78591" stop="78292"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243444" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78786" stop="78703"/>
              <exon start="78591" stop="78187"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232459" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78784" stop="78703"/>
              <exon start="78591" stop="78205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267323" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78545" stop="78187"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232383" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA : AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG : GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG : TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAATTATCTTCTTGTTTGCTAGTATTTGTTGCA</gDNA_template>
            <first_frame> E  L  E  K  H  I  P  D  L  H  V  L  I  S  T  P  F  H  P  A  Y  V  T  A  E  R  I  K  K  A  K  N  L  Q  L  L  L  T  A  G  I  G  S  D  H  V  D  L  K  A  A  A  A  A  G  L  T  V  A  E  V  T  G  S  N  T  V  S  V  A  E  D  E  L  M  R  I  L  I  L  V  R  N  F  L  P  G  H  H  Q  V  I  N  G  E  W  N  V  A  A  I  A  H  R  A  Y  D  L  E  G  K  T  V  G  T  V  G  A  G  R  I  G  R  L  L  L  Q  R  L  K  P  F  N  C  N  L  L  Y  H  D  R  L  K  M  D  S  E  L  E  N  Q  I  G  A  K  F  E  E  D  L  D  K  M  L  S  K  C  D  I  V  V  I  N  T  P  L  T  E  K  T  K :   G  M  F  D  K  E  R  I  A  K  L  K  K  G  V  L  I  V  N  N  A  R  G  A  I  M  D  T  Q  A  V  V  D  A  C  N  S  G  H  I  A   : G  Y  S  G  D  V  W  Y  P  Q  P  A  P  K  D  H  L  W  R  Y  M  P  N  Q  A  M  T  P  H  I  S  G  T  T  I  D  A  Q  :  L  R  Y  A  A  G  T  K  D  M  L  D  R  Y  F  K  G  E  D  F  P  A  E  N  Y  I  V  K  D  G  E  L  A  P  Q  Y  R  *  I  I  Y  V  *  S  C  V  *  I  S  V  L  N  K  L  A  S  R  V  F  N  K  L  I  K  L  A  T  L  C  S  S  R  T  L  M  Q  F  F  S  G  L  A  V  T  F  V  M  E  T  Y  V  L  F  C  D  G  G  L  C  M  I  L  Q  C  L  S  *  V  Y  N  *  T  S  L  L  W  *  L  Y  W  C  S  W  T  F  Y  V  L  K  K  I  I  F  L  F  A  S  I  C  C  </first_frame>
            <second_frame>  S  L  R  N  T  F  L  I  S  M  C  *  F  R  P  L  F  I  L  P  M  S  R  L  K  G  S  R  R  Q  K  I  Y  N  F  C  *  Q  L  E  L  D  Q  I  M  L  I  *  K  L  L  L  L  L  D  *  Q  *  Q  R  S  L  E  A  I  L  S  Q  L  R  K  M  N  *  C  E  S  *  F  L  S  E  I  S  Y  L  D  I  I  R  L  S  M  G  S  G  M  L  L  Q  L  R  T  E  L  M  I  W  K  A  R  L  L  E  L  L  V  Q  D  V  L  A  D  F  Y  S  S  D  *  S  H  L  T  V  I  Y  F  T  M  T  V  L  R  W  I  L  S  *  R  I  K  L  E  Q  S  L  R  K  I  S  I  R  C  S  R  N  V  T  *  W  S  S  I  R  L  L  Q  R  K  Q   : K  E  C  L  T  R  K  E  L  Q  S  *  R  R  E  F  *  L  *  T  M  L  E  E  Q  L  W  T  L  K  Q  L  L  M  L  V  T  A  V  I  L  Q  :  D  T  V  E  M  F  G  T  H  N  Q  L  P  R  T  I  Y  G  V  T  C  Q  T  K  L  *  L  L  T  F  L  G  L  P  L  M  H  S :   *  G  M  Q  L  E  Q  R  I  C  W  T  G  T  S  R  V  R  I  S  L  L  K  I  T  L  S  R  M  G  N  W  H  L  S  I  A  K  L  F  M  Y  R  V  V  S  R  F  L  C  *  I  N  W  Q  A  V  S  S  I  S  *  *  N  W  L  L  Y  V  L  L  E  L  *  C  S  F  S  P  G  *  L  *  L  L  *  W  K  H  M  S  S  S  V  M  E  V  Y  V  *  S  S  S  V  F  L  E  S  I  T  E  L  P  C  C  G  S  C  T  G  V  P  G  H  F  M  F  *  K  K  L  S  S  C  L  L  V  F  V  A </second_frame>
            <third_frame>   A  *  E  T  H  S  *  S  P  C  V  D  F  D  P  F  S  S  C  L  C  H  G  *  K  D  Q  E  G  K  K  S  T  T  S  A  D  S  W  N  W  I  R  S  C  *  S  E  S  C  C  C  C  W  I  D  S  S  R  G  H  W  K  Q  Y  C  L  S  C  G  R  *  T  D  A  N  L  N  S  C  P  K  F  L  T  W  T  S  S  G  Y  Q  W  G  V  E  C  C  C  N  C  A  Q  S  L  *  F  G  R  Q  D  C  W  N  C  W  C  R  T  Y  W  Q  T  F  T  P  A  I  E  A  I  *  L  *  S  T  L  P  *  P  S  *  D  G  F  *  A  R  E  S  N  W  S  K  V  *  G  R  S  R  *  D  A  L  E  M  *  H  S  G  H  Q  Y  A  S  Y  R  E  N  K  :  R  N  V  *  Q  G  K  N  C  K  V  E  E  G  S  S  N  C  K  Q  C  S  R  S  N  Y  G  H  S  S  S  C  *  C  L  *  Q  R  S  Y  C  R :   I  Q  W  R  C  L  V  P  T  T  S  S  Q  G  P  S  M  A  L  H  A  K  P  S  Y  D  S  S  H  F  W  D  Y  H  *  C  T   : V  E  V  C  S  W  N  K  G  Y  V  G  Q  V  L  Q  G  *  G  F  P  C  *  K  L  H  C  Q  G  W  G  I  G  T  S  V  S  L  N  Y  L  C  I  E  L  C  L  D  F  C  V  K  *  T  G  K  P  C  L  Q  *  A  D  K  I  G  Y  F  M  F  F  *  N  S  N  A  V  F  L  R  V  S  C  N  F  C  D  G  N  I  C  P  L  L  *  W  R  S  M  Y  D  P  P  V  S  F  L  S  L  *  L  N  F  L  A  V  V  V  V  L  V  F  L  D  I  L  C  F  K  K  N  Y  L  L  V  C  *  Y  L  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="-"/>
                <serials PGL_serial="18" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="80458" stop="79917"/>
                    <exon start="79175" stop="79051"/>
                    <exon start="78815" stop="78703"/>
                    <exon start="78591" stop="78478"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>891</number_coding_nucleotides>
                  <number_encoded_amino_acids>297</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGIGSDHVDLKAAAAAGLTVAEVTGSNTVSVAEDELMRILILVRNFLPGHHQVINGEWNVAAIAHRAYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDSELENQIGAKFEEDLDKMLSKCDIVVINTPLTEKTKGMFDKERIAKLKKGVLIVNNARGAIMDTQAVVDACNSGHIAGYSGDVWYPQPAPKDHLWRYMPNQAMTPHISGTTIDAQLRYAAGTKDMLDRYFKGEDFPAENYIVKDGELAPQYR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="79343" e_stop="78922"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="79343" e_stop="78922" e_length="422"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79343" stop="78922"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239621" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATT</gDNA_template>
            <first_frame> Q  L  V  L  P  E  *  Y  D  C  Q  W  S  I  F  K  I  L  G  D  V  R  V  V  S  V  H  T  S  L  F  S  C  H  *  G  H  *  L  F  P  C  A  I  S  Q  I  A  H  N  F  N  Y  V  I  Q  R  N  V  *  Q  G  K  N  C  K  V  E  E  G  S  S  N  C  K  Q  C  S  R  S  N  Y  G  H  S  S  S  C  *  C  L  *  Q  R  S  Y  C  R  Y  F  N  I  T  *  T  H  H  P  E  M  S  P  Q  P  *  Y  Q  L  N  T  P  L  Y  F  F  L  Q  F  L  L  V  S  F  L  Q  Y  I  L  S  T   </first_frame>
            <second_frame>  N  L  C  C  Q  N  N  M  I  A  N  G  V  F  L  R  F  L  E  M  *  E  L  F  L  S  I  H  H  S  S  H  V  T  K  V  I  D  C  F  H  V  L  Y  R  K  L  L  T  I  L  T  M  *  S  R  G  M  F  D  K  E  R  I  A  K  L  K  K  G  V  L  I  V  N  N  A  R  G  A  I  M  D  T  Q  A  V  V  D  A  C  N  S  G  H  I  A  G  I  L  T  *  L  E  H  I  I  Q  R  *  A  L  S  L  N  I  N  *  T  H  H  Y  I  F  F  F  N  S  C  L  F  L  F  F  N  I  F  Y  R  H  </second_frame>
            <third_frame>   T  C  V  A  R  I  I  *  L  P  M  E  Y  F  *  D  S  W  R  C  K  S  C  F  C  P  Y  I  T  L  L  M  S  L  R  S  L  I  V  S  M  C  Y  I  A  N  C  S  Q  F  *  L  C  D  P  E  E  C  L  T  R  K  E  L  Q  S  *  R  R  E  F  *  L  *  T  M  L  E  E  Q  L  W  T  L  K  Q  L  L  M  L  V  T  A  V  I  L  Q  V  F  *  H  N  L  N  T  S  S  R  D  E  P  S  A  L  I  S  I  E  H  T  I  I  F  F  S  S  I  L  A  C  F  F  S  S  I  Y  F  I  D  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0016A12.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="82670" e_stop="82146"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="82670" e_stop="82146" e_length="525"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82670" stop="82146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248671" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="6" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATT</gDNA_template>
            <first_frame> F  S  L  F  L  V  S  T  K  P  F  S  V  N  P  K  K  I  P  M  A  M  R  R  V  A  S  T  A  A  R  A  I  A  S  P  S  S  L  V  F  T  R  E  L  Q  V  T  S  H  F  S  S  I  A  T  F  C  C  F  C  F  I  *  P  S  F  R  P  L  M  N  Y  R  K  P  A  R  I  N  S  D  F  S  R  I  K  *  V  G  D  W  N  R  G  N  *  R  N  L  T  V  *  R  K  K  L  N  T  L  Y  L  V  L  Y  P  S  S  L  L  F  G  F  P  R  T  L  H  T  K  *  N  G  S  D  M  K  G  L  I  T  F  Q  F  S  L  L  R  P  F  L  S  F  Q  F  *  F  A  *  I  Y  L  I  F  I  R  V  E  L  Y  V  S  N  *  I </first_frame>
            <second_frame>  S  L  C  F  *  *  V  R  N  P  F  L  *  I  Q  K  K  F  R  W  R  *  G  V  *  L  L  Q  Q  L  V  L  L  L  H  L  H  P  *  F  L  P  E  N  F  R  *  L  A  I  S  P  Q  *  P  L  F  V  A  F  V  L  Y  D  L  V  F  A  L  *  *  I  I  G  N  R  H  G  S  T  P  I  F  R  E  S  S  E  L  E  I  G  T  E  E  T  K  G  I  *  P  C  K  G  K  N  *  T  H  C  I  W  C  S  T  P  R  L  F  F  L  A  F  P  V  L  Y  T  P  N  E  M  A  R  I  *  K  D  *  *  L  F  S  F  H  Y  C  V  L  F  *  A  F  S  F  N  L  R  E  Y  T  *  F  L  L  G  *  S  Y  M  F  Q  I  K   </second_frame>
            <third_frame>   L  S  V  F  S  K  Y  E  T  L  F  C  K  S  K  K  N  S  D  G  D  E  A  C  S  F  Y  S  S  S  C  Y  C  F  T  F  I  L  S  F  Y  Q  R  T  S  G  N  *  P  F  L  L  N  S  H  F  L  L  L  L  F  Y  M  T  *  F  S  P  F  D  E  L  S  E  T  G  T  D  Q  L  R  F  F  E  N  Q  V  S  W  R  L  E  Q  R  K  L  K  E  F  N  R  V  K  E  K  I  K  H  T  V  F  G  A  L  P  L  V  S  S  F  W  L  S  P  Y  S  T  H  Q  M  K  W  L  G  Y  E  R  T  N  N  F  S  V  F  I  T  A  S  F  F  K  L  S  V  L  I  C  V  N  I  P  N  F  Y  *  G  R  V  I  C  F  K  L  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="-"/>
                <serials PGL_serial="18" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82473" stop="82174"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>297</number_coding_nucleotides>
                  <number_encoded_amino_acids>99</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FSPFDELSETGTDQLRFFENQVSWRLEQRKLKEFNRVKEKIKHTVFGALPLVSSFWLSPYSTHQMKWLGYERTNNFSVFITASFFKLSVLICVNIPNFY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="78157" PGL_stop="78531"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="78157" e_stop="78531"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.939"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.939">
            <gDNA_exon_boundary e_start="78157" e_stop="78531" e_length="375"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78157" stop="78531"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262133" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTAACCTAGCGACTGCAACAAATACTAGCAAACAAGAAGATAATTTTTTTTAAAACATAAAATGTCCAGGAACACCAGTACAACTACCACAGCAAGGAAGTTCAGTTATAGACTCAAGAAAGACACTGGAGGATCATACATAGACCTCCATCACAGAAGAGGACATATGTTTCCATCACAAAAGTTACAGCTAACCCGGAGAAAAACTGCATTAGAGTTCTAGAAGAACATAAAGTAGCCAATTTTATCAGCTTATTGAAGACACGGCTTGCCAGTTTATTTAACACAGAAATCTAGACACAACTCTATACATAAATAATTTAGCGATACTGAGGTGCCAATTCCCCATCCTTGACAATGTAATTTTCAGCAGG</gDNA_template>
            <first_frame> I  N  L  A  T  A  T  N  T  S  K  Q  E  D  N  F  F  *  N  I  K  C  P  G  T  P  V  Q  L  P  Q  Q  G  S  S  V  I  D  S  R  K  T  L  E  D  H  T  *  T  S  I  T  E  E  D  I  C  F  H  H  K  S  Y  S  *  P  G  E  K  L  H  *  S  S  R  R  T  *  S  S  Q  F  Y  Q  L  I  E  D  T  A  C  Q  F  I  *  H  R  N  L  D  T  T  L  Y  I  N  N  L  A  I  L  R  C  Q  F  P  I  L  D  N  V  I  F  S  R </first_frame>
            <second_frame>  L  T  *  R  L  Q  Q  I  L  A  N  K  K  I  I  F  F  K  T  *  N  V  Q  E  H  Q  Y  N  Y  H  S  K  E  V  Q  L  *  T  Q  E  R  H  W  R  I  I  H  R  P  P  S  Q  K  R  T  Y  V  S  I  T  K  V  T  A  N  P  E  K  N  C  I  R  V  L  E  E  H  K  V  A  N  F  I  S  L  L  K  T  R  L  A  S  L  F  N  T  E  I  *  T  Q  L  Y  T  *  I  I  *  R  Y  *  G  A  N  S  P  S  L  T  M  *  F  S  A   </second_frame>
            <third_frame>   *  P  S  D  C  N  K  Y  *  Q  T  R  R  *  F  F  L  K  H  K  M  S  R  N  T  S  T  T  T  T  A  R  K  F  S  Y  R  L  K  K  D  T  G  G  S  Y  I  D  L  H  H  R  R  G  H  M  F  P  S  Q  K  L  Q  L  T  R  R  K  T  A  L  E  F  *  K  N  I  K  *  P  I  L  S  A  Y  *  R  H  G  L  P  V  Y  L  T  Q  K  S  R  H  N  S  I  H  K  *  F  S  D  T  E  V  P  I  P  H  P  *  Q  C  N  F  Q  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0016A12.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="+" PGL_start="88625" PGL_stop="100700"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88625" e_stop="88805"/>
            <exon e_start="88909" e_stop="88995"/>
            <exon e_start="90177" e_stop="90282"/>
            <exon e_start="91407" e_stop="91442"/>
            <exon e_start="92082" e_stop="92164"/>
            <exon e_start="92246" e_stop="92299"/>
            <exon e_start="92785" e_stop="92836"/>
            <exon e_start="93464" e_stop="93528"/>
            <exon e_start="94844" e_stop="94900"/>
            <exon e_start="95051" e_stop="95123"/>
            <exon e_start="98295" e_stop="98381"/>
            <exon e_start="98468" e_stop="98648"/>
            <exon e_start="99208" e_stop="99341"/>
            <exon e_start="100090" e_stop="100700"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.960" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.593" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.894" acc_prob="0.975" e_score="1.000"/>
          <exon-intron don_prob="0.533" acc_prob="0.738" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.496" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.962" e_score="1.000"/>
          <exon-intron don_prob="0.521" acc_prob="0.989" e_score="0.973"/>
          <exon-intron don_prob="0.992" acc_prob="0.919" e_score="1.000"/>
          <exon-intron don_prob="0.776" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.816" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="88625" e_stop="88805" e_length="181"/>
          </exon>
          <intron i_serial="1" don_prob="0.960" acc_prob="0.965">
            <gDNA_intron_boundary i_start="88806" i_stop="88908" i_length="103"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="88909" e_stop="88995" e_length="87"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.593">
            <gDNA_intron_boundary i_start="88996" i_stop="90176" i_length="1181"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="90177" e_stop="90282" e_length="106"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="90283" i_stop="91406" i_length="1124"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="91407" e_stop="91442" e_length="36"/>
          </exon>
          <intron i_serial="4" don_prob="0.894" acc_prob="0.975">
            <gDNA_intron_boundary i_start="91443" i_stop="92081" i_length="639"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="92082" e_stop="92164" e_length="83"/>
          </exon>
          <intron i_serial="5" don_prob="0.533" acc_prob="0.738">
            <gDNA_intron_boundary i_start="92165" i_stop="92245" i_length="81"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="92246" e_stop="92299" e_length="54"/>
          </exon>
          <intron i_serial="6" don_prob="0.993" acc_prob="0.981">
            <gDNA_intron_boundary i_start="92300" i_stop="92784" i_length="485"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="92785" e_stop="92836" e_length="52"/>
          </exon>
          <intron i_serial="7" don_prob="0.996" acc_prob="0.984">
            <gDNA_intron_boundary i_start="92837" i_stop="93463" i_length="627"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="93464" e_stop="93528" e_length="65"/>
          </exon>
          <intron i_serial="8" don_prob="0.496" acc_prob="0.987">
            <gDNA_intron_boundary i_start="93529" i_stop="94843" i_length="1315"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="94844" e_stop="94900" e_length="57"/>
          </exon>
          <intron i_serial="9" don_prob="0.999" acc_prob="0.962">
            <gDNA_intron_boundary i_start="94901" i_stop="95050" i_length="150"/>
          </intron>
          <exon e_serial="10" e_score="0.973">
            <gDNA_exon_boundary e_start="95051" e_stop="95123" e_length="73"/>
          </exon>
          <intron i_serial="10" don_prob="0.521" acc_prob="0.989">
            <gDNA_intron_boundary i_start="95124" i_stop="98294" i_length="3171"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="98295" e_stop="98381" e_length="87"/>
          </exon>
          <intron i_serial="11" don_prob="0.992" acc_prob="0.919">
            <gDNA_intron_boundary i_start="98382" i_stop="98467" i_length="86"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="98468" e_stop="98648" e_length="181"/>
          </exon>
          <intron i_serial="12" don_prob="0.776" acc_prob="0.985">
            <gDNA_intron_boundary i_start="98649" i_stop="99207" i_length="559"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="99208" e_stop="99341" e_length="134"/>
          </exon>
          <intron i_serial="13" don_prob="0.816" acc_prob="0.999">
            <gDNA_intron_boundary i_start="99342" i_stop="100089" i_length="748"/>
          </intron>
          <exon e_serial="14" e_score="0.985">
            <gDNA_exon_boundary e_start="100090" e_stop="100700" e_length="611"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88625" stop="88805"/>
              <exon start="88909" stop="88995"/>
              <exon start="90177" stop="90282"/>
              <exon start="91407" stop="91442"/>
              <exon start="92082" stop="92164"/>
              <exon start="92246" stop="92299"/>
              <exon start="92785" stop="92836"/>
              <exon start="93464" stop="93528"/>
              <exon start="94844" stop="94900"/>
              <exon start="95051" stop="95123"/>
              <exon start="98295" stop="98381"/>
              <exon start="98468" stop="98648"/>
              <exon start="99208" stop="99341"/>
              <exon start="100090" stop="100700"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744923" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88659" stop="88805"/>
              <exon start="88909" stop="88995"/>
              <exon start="90177" stop="90282"/>
              <exon start="91407" stop="91442"/>
              <exon start="92082" stop="92164"/>
              <exon start="92246" stop="92299"/>
              <exon start="92785" stop="92815"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301063" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88739" stop="88805"/>
              <exon start="88909" stop="88995"/>
              <exon start="90177" stop="90282"/>
              <exon start="91407" stop="91442"/>
              <exon start="92082" stop="92133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239516" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98316" stop="98381"/>
              <exon start="98468" stop="98648"/>
              <exon start="99208" stop="99341"/>
              <exon start="100090" stop="100530"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698492" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98319" stop="98381"/>
              <exon start="98468" stop="98648"/>
              <exon start="99208" stop="99341"/>
              <exon start="100090" stop="100450"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344965" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100214" stop="100577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223291" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100277" stop="100577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223058" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTAAACGAGCGTTGATTTGTCGCTGACGAAATTTACAGTCAAGAGTAGTAACCGGTTGTAGTGAAAAAATGGAGTCGAGGAAAGTGACGAAGACGCTGGAAGATCAATGGGTGGTGGAGCGTCGAGTCCGAGAGATATACGATTATTTCTACAGCATTTCCCCCAACTCTCCGTCCGACCT : CATAGAGATCGAACGTGACAAACACTTCGGTTATCTAAGCCAAGGTCTCAGAAAACTTGGTCCGTCGTTTTCCGTTTTGGATGCCAG : TCGACCATGGCTTTGCTACTGGACACTTCATTCAATCGCTTTGTTGGGAGAATCTATTGGTGGCAAACTGGAAAATGATGCAATTGACTTTCTGACCCGTTGCCAG : GATAAAGATGGTGGCTATGGAGGTGGACCTGGTCAG : ATGCCTCATCTTGCAACTACTTATGCTGCAGTCAATTCACTAATAACTTTGGGCAAACCTGAAGCTCTGTCATCAATTAATAG : AGAAAAGTTGTACACATTTTTGCTGCGAATGAAAGACGCAAGTGGTGGATTCAG : GATGCACGATGGTGGAGAAGTAGATGTTCGTGCCTGTTATACTGCCATTTCT : GTTGCAAATATATTAAACATTGTGGATGACGAGCTGATTCATGGTGTTGGAAATTACATCCTAAG : TTGTCAGACTTATGAAGGTGGAATTGCTGGCGAACCAGGTTCTGAAGCTCATGGTGG : GTATACTTTCTGTGGGTTGGCTGCAATGATTCTGATCAACGAAGTGAATCGATTGGACTTGCCAGGTTTAATT : GATTGGGTGGTATTTAGACAAGGGGTCGAAGGTGGATTTCAAGGCAGGACAAATAAATTAGTCGATGGCTGCTATTCCTTTTGGCAG : GGCGCGGTAGTGTTTCTTATACAAAGACTAAATTTGATAGTCCATGAACAACTAGGGCTGTCAAATGACCTCAGTACAGAAAGTGCTGATGATTCTTCAGAGTCAGAGTTATCTGATGAAGAAGAGCATTTGGAAGGGATATCCTCTCATGTTCAGGATACTTTCCCTCTTGGACAAGCAG : GTGCTTGTCAAGAAAATGCTTCTCATAGCCCAAAAATAGCAGATACTGGATATGAGTTTATCAACCGACCCATAGCTATGAGGCCTCTCTTTGACAGCATGTATCTGCAGCAATATGTTCTTCTTTGCTCTCAG : ATTGAAGTTGGTGGTTTCAGAGACAAACCTGGGAAGGGTAGAGACTACTACCATACCTGTTACTGTTTAAGTGGTCTTTCAATTGCTCAGTATAGCTGGACCGACGAAGCTGATTCTCCACCATTACCCAGGGATGTATTTGGTCCTTATTCCAAATGTCTGTTGGAACAGGTTCACCCACTCTTCAACGTAGTGTTGGATCGGTATTATGAAGCTCGCGAATACTTCTCAGGCTTGTGAGACTGTTTCACCACTTTCATTAGCACCAACTTTTTCAGAAACTTAGTTGCAATCCAGAAGTTAAAAGTGTCATTGGGTTCAAAAGAGTTGTGATCGTTTATGTACAATATCCTTGCATTTGTATACGTGATACAAGTTGAGAGAATAACGGGTACTTTCTGAACTTGCTGAACTAGCACTAAATTCGTCTCTGTTTAGTGAGGTCTGTAAACATCAATGTGAAATTGCGAGATATGCATGTAATAGTGGCTAAGATTTACAAATCTGGATACCGGTTATTAGTGATCAGAAATTTCATTCAATTTCCCAAACGGTCACCTAAGTTTAGGATATTGCTTTAAAATATTATTTATTTTTCATTTAAGATCAAA</gDNA_template>
            <first_frame> V  N  E  R  *  F  V  A  D  E  I  Y  S  Q  E  *  *  P  V  V  V  K  K  W  S  R  G  K  *  R  R  R  W  K  I  N  G  W  W  S  V  E  S  E  R  Y  T  I  I  S  T  A  F  P  P  T  L  R  P  T   : S  *  R  S  N  V  T  N  T  S  V  I  *  A  K  V  S  E  N  L  V  R  R  F  P  F  W  M  P   : V  D  H  G  F  A  T  G  H  F  I  Q  S  L  C  W  E  N  L  L  V  A  N  W  K  M  M  Q  L  T  F  *  P  V  A  R :   I  K  M  V  A  M  E  V  D  L  V  R :   C  L  I  L  Q  L  L  M  L  Q  S  I  H  *  *  L  W  A  N  L  K  L  C  H  Q  L  I   : E  K  S  C  T  H  F  C  C  E  *  K  T  Q  V  V  D  S   : G  C  T  M  V  E  K  *  M  F  V  P  V  I  L  P  F  L :   L  Q  I  Y  *  T  L  W  M  T  S  *  F  M  V  L  E  I  T  S  *   : V  V  R  L  M  K  V  E  L  L  A  N  Q  V  L  K  L  M  V   : G  I  L  S  V  G  W  L  Q  *  F  *  S  T  K  *  I  D  W  T  C  Q  V  *  L :   I  G  W  Y  L  D  K  G  S  K  V  D  F  K  A  G  Q  I  N  *  S  M  A  A  I  P  F  G  R :   A  R  *  C  F  L  Y  K  D  *  I  *  *  S  M  N  N  *  G  C  Q  M  T  S  V  Q  K  V  L  M  I  L  Q  S  Q  S  Y  L  M  K  K  S  I  W  K  G  Y  P  L  M  F  R  I  L  S  L  L  D  K  Q  :  V  L  V  K  K  M  L  L  I  A  Q  K  *  Q  I  L  D  M  S  L  S  T  D  P  *  L  *  G  L  S  L  T  A  C  I  C  S  N  M  F  F  F  A  L  R :   L  K  L  V  V  S  E  T  N  L  G  R  V  E  T  T  T  I  P  V  T  V  *  V  V  F  Q  L  L  S  I  A  G  P  T  K  L  I  L  H  H  Y  P  G  M  Y  L  V  L  I  P  N  V  C  W  N  R  F  T  H  S  S  T  *  C  W  I  G  I  M  K  L  A  N  T  S  Q  A  C  E  T  V  S  P  L  S  L  A  P  T  F  S  E  T  *  L  Q  S  R  S  *  K  C  H  W  V  Q  K  S  C  D  R  L  C  T  I  S  L  H  L  Y  T  *  Y  K  L  R  E  *  R  V  L  S  E  L  A  E  L  A  L  N  S  S  L  F  S  E  V  C  K  H  Q  C  E  I  A  R  Y  A  C  N  S  G  *  D  L  Q  I  W  I  P  V  I  S  D  Q  K  F  H  S  I  S  Q  T  V  T  *  V  *  D  I  A  L  K  Y  Y  L  F  F  I  *  D  Q  </first_frame>
            <second_frame>  *  T  S  V  D  L  S  L  T  K  F  T  V  K  S  S  N  R  L  *  *  K  N  G  V  E  E  S  D  E  D  A  G  R  S  M  G  G  G  A  S  S  P  R  D  I  R  L  F  L  Q  H  F  P  Q  L  S  V  R  P  :  H  R  D  R  T  *  Q  T  L  R  L  S  K  P  R  S  Q  K  T  W  S  V  V  F  R  F  G  C  Q  :  S  T  M  A  L  L  L  D  T  S  F  N  R  F  V  G  R  I  Y  W  W  Q  T  G  K  *  C  N  *  L  S  D  P  L  P   : G  *  R  W  W  L  W  R  W  T  W  S   : D  A  S  S  C  N  Y  L  C  C  S  Q  F  T  N  N  F  G  Q  T  *  S  S  V  I  N  *  *  :  R  K  V  V  H  I  F  A  A  N  E  R  R  K  W  W  I  Q  :  D  A  R  W  W  R  S  R  C  S  C  L  L  Y  C  H  F   : C  C  K  Y  I  K  H  C  G  *  R  A  D  S  W  C  W  K  L  H  P  K  :  L  S  D  L  *  R  W  N  C  W  R  T  R  F  *  S  S  W  W  :  V  Y  F  L  W  V  G  C  N  D  S  D  Q  R  S  E  S  I  G  L  A  R  F  N   : *  L  G  G  I  *  T  R  G  R  R  W  I  S  R  Q  D  K  *  I  S  R  W  L  L  F  L  L  A   : G  R  G  S  V  S  Y  T  K  T  K  F  D  S  P  *  T  T  R  A  V  K  *  P  Q  Y  R  K  C  *  *  F  F  R  V  R  V  I  *  *  R  R  A  F  G  R  D  I  L  S  C  S  G  Y  F  P  S  W  T  S  R :   C  L  S  R  K  C  F  S  *  P  K  N  S  R  Y  W  I  *  V  Y  Q  P  T  H  S  Y  E  A  S  L  *  Q  H  V  S  A  A  I  C  S  S  L  L  S   : D  *  S  W  W  F  Q  R  Q  T  W  E  G  *  R  L  L  P  Y  L  L  L  F  K  W  S  F  N  C  S  V  *  L  D  R  R  S  *  F  S  T  I  T  Q  G  C  I  W  S  L  F  Q  M  S  V  G  T  G  S  P  T  L  Q  R  S  V  G  S  V  L  *  S  S  R  I  L  L  R  L  V  R  L  F  H  H  F  H  *  H  Q  L  F  Q  K  L  S  C  N  P  E  V  K  S  V  I  G  F  K  R  V  V  I  V  Y  V  Q  Y  P  C  I  C  I  R  D  T  S  *  E  N  N  G  Y  F  L  N  L  L  N  *  H  *  I  R  L  C  L  V  R  S  V  N  I  N  V  K  L  R  D  M  H  V  I  V  A  K  I  Y  K  S  G  Y  R  L  L  V  I  R  N  F  I  Q  F  P  K  R  S  P  K  F  R  I  L  L  *  N  I  I  Y  F  S  F  K  I  K </second_frame>
            <third_frame>   K  R  A  L  I  C  R  *  R  N  L  Q  S  R  V  V  T  G  C  S  E  K  M  E  S  R  K  V  T  K  T  L  E  D  Q  W  V  V  E  R  R  V  R  E  I  Y  D  Y  F  Y  S  I  S  P  N  S  P  S  D  L :   I  E  I  E  R  D  K  H  F  G  Y  L  S  Q  G  L  R  K  L  G  P  S  F  S  V  L  D  A  S :   R  P  W  L  C  Y  W  T  L  H  S  I  A  L  L  G  E  S  I  G  G  K  L  E  N  D  A  I  D  F  L  T  R  C  Q  :  D  K  D  G  G  Y  G  G  G  P  G  Q  :  M  P  H  L  A  T  T  Y  A  A  V  N  S  L  I  T  L  G  K  P  E  A  L  S  S  I  N  R :   E  K  L  Y  T  F  L  L  R  M  K  D  A  S  G  G  F  R :   M  H  D  G  G  E  V  D  V  R  A  C  Y  T  A  I  S  :  V  A  N  I  L  N  I  V  D  D  E  L  I  H  G  V  G  N  Y  I  L  S :   C  Q  T  Y  E  G  G  I  A  G  E  P  G  S  E  A  H  G  G :   Y  T  F  C  G  L  A  A  M  I  L  I  N  E  V  N  R  L  D  L  P  G  L  I  :  D  W  V  V  F  R  Q  G  V  E  G  G  F  Q  G  R  T  N  K  L  V  D  G  C  Y  S  F  W  Q  :  G  A  V  V  F  L  I  Q  R  L  N  L  I  V  H  E  Q  L  G  L  S  N  D  L  S  T  E  S  A  D  D  S  S  E  S  E  L  S  D  E  E  E  H  L  E  G  I  S  S  H  V  Q  D  T  F  P  L  G  Q  A   : G  A  C  Q  E  N  A  S  H  S  P  K  I  A  D  T  G  Y  E  F  I  N  R  P  I  A  M  R  P  L  F  D  S  M  Y  L  Q  Q  Y  V  L  L  C  S  Q  :  I  E  V  G  G  F  R  D  K  P  G  K  G  R  D  Y  Y  H  T  C  Y  C  L  S  G  L  S  I  A  Q  Y  S  W  T  D  E  A  D  S  P  P  L  P  R  D  V  F  G  P  Y  S  K  C  L  L  E  Q  V  H  P  L  F  N  V  V  L  D  R  Y  Y  E  A  R  E  Y  F  S  G  L  *  D  C  F  T  T  F  I  S  T  N  F  F  R  N  L  V  A  I  Q  K  L  K  V  S  L  G  S  K  E  L  *  S  F  M  Y  N  I  L  A  F  V  Y  V  I  Q  V  E  R  I  T  G  T  F  *  T  C  *  T  S  T  K  F  V  S  V  *  *  G  L  *  T  S  M  *  N  C  E  I  C  M  *  *  W  L  R  F  T  N  L  D  T  G  Y  *  *  S  E  I  S  F  N  F  P  N  G  H  L  S  L  G  Y  C  F  K  I  L  F  I  F  H  L  R  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88651" stop="88805"/>
                    <exon start="88909" stop="88995"/>
                    <exon start="90177" stop="90282"/>
                    <exon start="91407" stop="91442"/>
                    <exon start="92082" stop="92164"/>
                    <exon start="92246" stop="92299"/>
                    <exon start="92785" stop="92836"/>
                    <exon start="93464" stop="93528"/>
                    <exon start="94844" stop="94900"/>
                    <exon start="95051" stop="95123"/>
                    <exon start="98295" stop="98381"/>
                    <exon start="98468" stop="98648"/>
                    <exon start="99208" stop="99341"/>
                    <exon start="100090" stop="100329"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1407</number_coding_nucleotides>
                  <number_encoded_amino_acids>469</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RNLQSRVVTGCSEKMESRKVTKTLEDQWVVERRVREIYDYFYSISPNSPSDLIEIERDKHFGYLSQGLRKLGPSFSVLDASRPWLCYWTLHSIALLGESIGGKLENDAIDFLTRCQDKDGGYGGGPGQMPHLATTYAAVNSLITLGKPEALSSINREKLYTFLLRMKDASGGFRMHDGGEVDVRACYTAISVANILNIVDDELIHGVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEVNRLDLPGLIDWVVFRQGVEGGFQGRTNKLVDGCYSFWQGAVVFLIQRLNLIVHEQLGLSNDLSTESADDSSESELSDEEEHLEGISSHVQDTFPLGQAGACQENASHSPKIADTGYEFINRPIAMRPLFDSMYLQQYVLLCSQIEVGGFRDKPGKGRDYYHTCYCLSGLSIAQYSWTDEADSPPLPRDVFGPYSKCLLEQVHPLFNVVLDRYYEAREYFSGL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="+" PGL_start="101234" PGL_stop="101983"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="101234" e_stop="101983"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="101234" e_stop="101983" e_length="750"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101234" stop="101869"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314807" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101248" stop="101931"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345006" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101330" stop="101974"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728818" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101366" stop="101983"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334690" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101395" stop="101811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307417" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAAGTGGAAACCGCCAAAACTATCATTATCGCAGAGACCTCATCTTTCAACTTCCATTCATTATTCTATTTTCCGTTTCACTCCATTTTCATACACCCAATCCCATTTTTGTAGCAGCAGTGTTCTGTTTCTTCTTCATGGAATTGAATCATACCAAGCAGACTCTGCAAACGGCTATGGAGAATGAACAGCAGCATCTCTCCCTCTCTGAATCAGATTCTACTGATTCTGAACCTGAGAAAGCTATTACTTTCTCCTCCCCAGCTCGTTTTCATAGCGGCTCCGATTCTGATCATTCCACTAAGTTCCAAACAGATAAAGCTACTAATCCCTCTACCGTCAATGGCGATTCTACTAAGGCGCAATCTCAGCCGAGGTCATCAATTTCCTCCGATTCAGATGATTTTAGTAAGTGTGGAGAACATAAAGTTAGTAAGATTGATTCTACTACTGCTACTGTTAATAGAGATTCTACAGCTACTAAAGTATCTTCACCGCCGGTGGAATCTCCGCCGAGGTCGTCAATTTCCTCTGATCAAATTTCTCTTCCTCATGAGTCCTTAAATATGGAGGATACTAAGCCTTCTGCAGCTCCGACGGGGAGTCCGCCGGAAAAACCTCCAATACCGGAAGCGGTGGTGAAGAAGTTTATCAAGGAGGAGCCACTGGCTTTGGTGAAAGCGGATCTGTTTGTCGGAGATGGTACAGCTAGTATTAAGGAAGGTGAAGACAGCGGCAACCGTCGGCAG</gDNA_template>
            <first_frame> E  S  G  N  R  Q  N  Y  H  Y  R  R  D  L  I  F  Q  L  P  F  I  I  L  F  S  V  S  L  H  F  H  T  P  N  P  I  F  V  A  A  V  F  C  F  F  F  M  E  L  N  H  T  K  Q  T  L  Q  T  A  M  E  N  E  Q  Q  H  L  S  L  S  E  S  D  S  T  D  S  E  P  E  K  A  I  T  F  S  S  P  A  R  F  H  S  G  S  D  S  D  H  S  T  K  F  Q  T  D  K  A  T  N  P  S  T  V  N  G  D  S  T  K  A  Q  S  Q  P  R  S  S  I  S  S  D  S  D  D  F  S  K  C  G  E  H  K  V  S  K  I  D  S  T  T  A  T  V  N  R  D  S  T  A  T  K  V  S  S  P  P  V  E  S  P  P  R  S  S  I  S  S  D  Q  I  S  L  P  H  E  S  L  N  M  E  D  T  K  P  S  A  A  P  T  G  S  P  P  E  K  P  P  I  P  E  A  V  V  K  K  F  I  K  E  E  P  L  A  L  V  K  A  D  L  F  V  G  D  G  T  A  S  I  K  E  G  E  D  S  G  N  R  R  Q </first_frame>
            <second_frame>  K  V  E  T  A  K  T  I  I  I  A  E  T  S  S  F  N  F  H  S  L  F  Y  F  P  F  H  S  I  F  I  H  P  I  P  F  L  *  Q  Q  C  S  V  S  S  S  W  N  *  I  I  P  S  R  L  C  K  R  L  W  R  M  N  S  S  I  S  P  S  L  N  Q  I  L  L  I  L  N  L  R  K  L  L  L  S  P  P  Q  L  V  F  I  A  A  P  I  L  I  I  P  L  S  S  K  Q  I  K  L  L  I  P  L  P  S  M  A  I  L  L  R  R  N  L  S  R  G  H  Q  F  P  P  I  Q  M  I  L  V  S  V  E  N  I  K  L  V  R  L  I  L  L  L  L  L  L  I  E  I  L  Q  L  L  K  Y  L  H  R  R  W  N  L  R  R  G  R  Q  F  P  L  I  K  F  L  F  L  M  S  P  *  I  W  R  I  L  S  L  L  Q  L  R  R  G  V  R  R  K  N  L  Q  Y  R  K  R  W  *  R  S  L  S  R  R  S  H  W  L  W  *  K  R  I  C  L  S  E  M  V  Q  L  V  L  R  K  V  K  T  A  A  T  V  G   </second_frame>
            <third_frame>   K  W  K  P  P  K  L  S  L  S  Q  R  P  H  L  S  T  S  I  H  Y  S  I  F  R  F  T  P  F  S  Y  T  Q  S  H  F  C  S  S  S  V  L  F  L  L  H  G  I  E  S  Y  Q  A  D  S  A  N  G  Y  G  E  *  T  A  A  S  L  P  L  *  I  R  F  Y  *  F  *  T  *  E  S  Y  Y  F  L  L  P  S  S  F  S  *  R  L  R  F  *  S  F  H  *  V  P  N  R  *  S  Y  *  S  L  Y  R  Q  W  R  F  Y  *  G  A  I  S  A  E  V  I  N  F  L  R  F  R  *  F  *  *  V  W  R  T  *  S  *  *  D  *  F  Y  Y  C  Y  C  *  *  R  F  Y  S  Y  *  S  I  F  T  A  G  G  I  S  A  E  V  V  N  F  L  *  S  N  F  S  S  S  *  V  L  K  Y  G  G  Y  *  A  F  C  S  S  D  G  E  S  A  G  K  T  S  N  T  G  S  G  G  E  E  V  Y  Q  G  G  A  T  G  F  G  E  S  G  S  V  C  R  R  W  Y  S  *  Y  *  G  R  *  R  Q  R  Q  P  S  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0016A12.2" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="101234" stop="101983"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>750</number_coding_nucleotides>
                  <number_encoded_amino_acids>250</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ESGNRQNYHYRRDLIFQLPFIILFSVSLHFHTPNPIFVAAVFCFFFMELNHTKQTLQTAMENEQQHLSLSESDSTDSEPEKAITFSSPARFHSGSDSDHSTKFQTDKATNPSTVNGDSTKAQSQPRSSISSDSDDFSKCGEHKVSKIDSTTATVNRDSTATKVSSPPVESPPRSSISSDQISLPHESLNMEDTKPSAAPTGSPPEKPPIPEAVVKKFIKEEPLALVKADLFVGDGTASIKEGEDSGNRRQ</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 371 chains have been computed
$ 
$ memory statistics:
$ 1056648 bytes spliced alignments in total
$ 339 spliced alignments have been stored
$ 3116 bytes was the average size of a spliced alignment
$ 44872 bytes predicted gene locations in total
$ 21 predicted gene locations have been stored
$ 2136 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 395 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-27 13:46:32
-->
