<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-27 20:01:54"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_markers/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M1664" ref_strand="+" ref_description="SGN-M1664 T0904 [cos_markers]">
      <seq>gcaatttagggttcgctccatcatcctaaatggctgattctccacgcaaaaggtattcccgctctccttcaccttgggaagaaaagtcaagatctcgctctcgatccccaactagatcacagtcaaggccaagaggaagatcaaggtccagaagtcatggaagggctgaagatactaatcctggaaacacactctatgtgactggattatcttcaagggtcactcaaagggatcttgaagagcatttctcaaaggagggaaaggtgaagtcagtttttctggttgtggagccccgttctcgcatctctcgtggttttgctttcataacaatggatagtcttgaggatgccaatcgctgcattaagcaccttaatcagtccgtccttgaaggccggtccataacggtggagaagtctcgtagaaaacggccaaggactccaacacctggtcattatcttgggcttcatcagagcgcaaggggtgatgggtatcatggtgatcggggtaggtatcgtggccgtggtgactat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="7182" stop="10653"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7482" g_stop="7513" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7653" g_stop="7672" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="52" r_length="20" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7673" i_stop="8612" i_length="940">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8613" g_stop="8723" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="163" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.531" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8812" g_stop="8911" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="263" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9228" g_stop="9377" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="413" r_length="150" r_score="0.993"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="9378" i_stop="10156" i_length="779">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10157" g_stop="10229" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="486" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10230" i_stop="10309" i_length="80">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="10310" g_stop="10353" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="487" r_stop="530" r_length="44" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-M1664" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-M1664" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7482" e_stop="7513"/>
          <exon e_start="7653" e_stop="7672"/>
          <exon e_start="8613" e_stop="8723"/>
          <exon e_start="8812" e_stop="8911"/>
          <exon e_start="9228" e_stop="9377"/>
          <exon e_start="10157" e_stop="10229"/>
          <exon e_start="10310" e_stop="10353"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAATTTAGGGTTCGCTCCATCATCCGAAATGGCAAGCTTTGCTCTCTCTAATCTCCCATTATATCTTTCTTCTATTTAACATATATGTGTTTTTTTGCATATTTTCAGAATTTTTTAACCTAATTAATTGTCGAAACAACAAATTTTATCATCTTTATGATTTCTTGCAGGCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATGCAAGGGATAAGGTTCAATTTTTTCTCTCTCTTTGATTTGAAGTAATGTTTTCCAGGGAACATCCTAATGAAGTCTCCCACTGTATGGTCGTCAAAGATCCTCCTACTTATTGATAAAATTGGTCATATGCTAAGTCTTTCTTGAGTTAGAAAGTACCAATCAACCTTTATGGATAAGTTTTTGGCATTTTTTACAAGTAAAATTGTTGAGCATGTTAATGGAGAACACACTAACATAGCCTTAGCGATGCATTTCTGTTTTCTTTTTGCACGCAAATAGATCTCCAACGGATTTTCTTTTAAGCCACTGTCTTTAGTAGTATTAGTTGACATAGAAATTTTATGAGCTACATATACTTGAAAAAGATACCATCATTACTCGAGGAACCATCTTTAAAGACATGTGGTTGGTGTTAATAAACTGGTTCAATGTTGTACTTATTGGACTCCCAGGTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAGGTATGAGTGGAACTTTAGTTTTACTTCACCTTCTTTATGTTAACAGCTTCGTTTCGGTTTCTCAAAATTTCCTCCATGACTTGATTAGGGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAGGTTGGTTTCTGGTTTACGTATAAGCAAGTTGTTTTCTGGTTCTGTTTCTGCCATGATTTGGTGCTCATACTGCATACCAACATTCTCTCTCGTTCAAAATAATTTGTGTTGTATCTACTCTTTATAATGGAAATTTTTCATTTATGATGATTATCTTAGAAACATCTAGTTTTCATTTAAGTTTATTGTATGAGCAAAGTCTTGTCAATGCATTTGCCAAGATATTGATGTATTGTGGAATTTTGGCTGGATTCTTTTCTCATTGTTCATACTTTAAAGCTTGCTATTGAAGTTTCTTATACTTTCTTTTGATTAGGTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAGGTCAGCTATTTATACATTGATTGGTGAACCATTGTTCTGTTGGCTTGCTTTTCTTTTTTCTTGACTTGGAGGTTTTCTGATTATATTCAGAAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAATAGAATCAGGCTTTTATGGTATCTCATCCTGGTGTTGGTTCTATCTCCATCTTTTAGCTGTTATAAGACGTGCGAAAATATTTAAGCTGCTATCCTGTGTGACTAGTGTCATATCCTATTTCTTAGTAATGGACATCGTTGTGTGCTTGTGCCACCTTCAGTTTTGCAGAGGTTTTTCGAGGAGACTTGCTTTTTTTTGGCACAGATTAGTTGAATGTTATATTCTTCCTTTAGGAGTGCATTTGGTGATTCTCTTTTCTTTGGATGTTAGCATCATAGGTTATGATTTCATAGAATTACAAATATTTCTGTTTTTTTTTGTTGTGAAGAGAACACCCGATATTAGCAATTTCATATTCTTCCATTACAAGGAATTCATTCTCTAGAATACATTATCTGGTCGAGATAACCCATTTGTTCTTGATGTAAATCACATATGTTCAGATTTCACATATTGAGATGATCTATTTTGTTTTTCAGTCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATGGTAAGCTTCTGATGCTATGTAAGTTCCTATTCTATTTTTGATTTGTGGAATCTCTAAAGTACTCATTGCTTTGGTCAAAGGTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTAT</genome_strand>
        <mrna_strand>GCAATTTAGGGTTCGCTCCATCATCCTAAATG...........................................................................................................................................GCTGATTCTCCACGCAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG........................................................................................GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG............................................................................................................................................................................................................................................................................................................................GTGAAGTCAGTTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATG................................................................................GGTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M9217" ref_strand="+" ref_description="SGN-M9217 C2_At5g66050 [cosii_markers]">
      <seq>tatttttgtcttctccacctaatttattttatccctaaatccccccctttttttttcctcctctctctgtaaacccacattgaatttattgtctaacaatgctcggcgttgagttaaggatctccaccgtcgccggagttttcaccgatctaccggaaacaagtcgccggagtgccagctggaactgtaactcctccattggaaatatctcatatcatctctcttccagaaataggcattgtagaaagtccagattcatggtaatctgtagcaagtcatcacgcggaagctttaatcggaaatctaatcagagtgatgaaccgggtgatgattatattgaagctgtcgttctcgtttcagagactatgaagcactacaaaatgcatatgggtggatttcaagaagaaacaagatggcactcatctgctcagctgattccctcttcttttcatcctaaggatcgtattgctaatgcatcatctttagggacaggatttcttcgccgtttcaagaatccaactatttttcttaagatttcctgtgatgcagaatatgtcttaccaattattgttggagaacatgctgtcgaaaaacttatagattcattgcatgaggaggagactggggattgccccgacgagttcctgcttttgaggaatctattgttgaaatctggctatgaagttaaaatggtgaagattacagaaagagtgactagtacttattttgccagaatatttttccacaaggcaggggaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="12205" stop="15386"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12505" g_stop="12864" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="360" r_length="360" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12865" i_stop="13984" i_length="1120">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13985" g_stop="14197" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="573" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14198" i_stop="14292" i_length="95">
            <donor d_prob="0.433" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14293" g_stop="14345" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="574" r_stop="626" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14346" i_stop="14443" i_length="98">
            <donor d_prob="0.796" d_score="1.00"/>
            <acceptor a_prob="0.519" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14444" g_stop="14500" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="627" r_stop="683" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="14501" i_stop="15015" i_length="515">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="15016" g_stop="15081" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="684" r_stop="749" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="15082" i_stop="15174" i_length="93">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="15175" g_stop="15185" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="750" r_stop="760" r_length="11" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-M9217" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>760</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-M9217" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12505" e_stop="12864"/>
          <exon e_start="13985" e_stop="14197"/>
          <exon e_start="14293" e_stop="14345"/>
          <exon e_start="14444" e_stop="14500"/>
          <exon e_start="15016" e_stop="15081"/>
          <exon e_start="15175" e_stop="15185"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTTTTGTCTTCTCCACCTAATTTATTTTATCCCTAAATCCCCCCCTTTTTTTTTCCTCCTCTCTCTGTAAACCCACATTGAATTTATTGTCTAACAATGCTCGGCGTTGAGTTAAGGATCTCCACCGTCGCCGGAGTTTTCACCGATCTACCGGAAACAAGTCGCCGGAGTGCCAGCTGGAACTGTAACTCCTCCATTGGAAATATCTCATATCATCTCTCTTCCAGAAATAGGCATTGTAGAAAGTCCAGATTCATGGTAATCTGTAGCAAGTCATCACGCGGAAGCTTTAATCGGAAATCTAATCAGAGTGATGAACCGGGTGATGATTATATTGAAGCTGTCGTTCTCGTTTCAGGTATGGAAAATTACCGTTTTGCCCTTTTCTCCGATATTTTTTTGTTAGAGAAATACTGATGCAGGTAATATATTCTTCATGAACATTACTTTGTTGAAATGTATGAAAAAGATCAGATTTTTCTCTCTATGCTTTTGCTTTTTTAATCAATGTAGCTCAACTGCTATTAGTAAGTGAAAAATGGAAAATTGGTTGCTTAGCTGCTAGCTCCACAGACTTTGAACAAGTTGCTTTCCCAGTAACATTTGATGATCCTGTACGAATTAGTCTAAAAAACCAATGTTATGGAATGGAGGGACCTAAAATCTTTGCTCCGCCTCTCCAAAAAATGTATTATCACACGTGGATCATTCAAAAAGAAACTACTTTTGGAGTATCTGATGCACACATTTTAATCATTTCAATTTGTATAAAAAATGACTTGAGATGGAAAATCATGCGCTCTACAATAATTTGAGAAACAAAATAAGTCAATTGATAATTTATATCTTGAATACTGAATCACAGAATCAGTTGAGTTCCCTATTTGATTCATATGATTCCATTTTGGTTTAGTCAGGTCTATTTCATGTGGTACCAAATGAATATGTATATGTGGATTTCTCTGCTTCCATTATGTAAGTTGTGACATTGGTCCTGGTAGAATTTTCATATTTTAGAAATTTCTACCAAGTCCTTTTCTATCACCTTTTGGAGGTCTGTTCCAGACATGACCAAACTATCACAGGCTCTCTCTCTTTATTCTCTGCCTGTGCTACTTGCATCTTTTTTTATTATTCTTCTCCAATATTCTACGCTTGCACATCTGTCTTATTATCCTTATTCATCCATCTTAATATCCATATGTCAATATTTATTCCGTGGATGTGATGGGACATAGGGGCTCAGCACTCAATCTTAATATAATATTGCTGGTCTAGTACTTATATAAAAATAACCTTTCACTTTGTTAGGCATCTTTTTATTGCATAGCCACTCATTCATCTCAAATACTTAAGTTATGTGTACTTTGAAATCTAATTGCTTATCACATTTTATCTGTAGTCTTTCTACTGTATATTAGTATTTTCTACCCTGCATCTGAGGCTAAGCATGTTTACCAATGCTGCAATGACTATAGAGACTATGAAGCACTACAAAATGCATATGGGTGGATTTCAAGAAGAAACAAGATGGCACTCATCTGCTCAGCTGATTCCCTCTTCTTTTCATCCTAAGGATCGTATTGCTAATGCATCATCTTTAGGGACAGGATTTCTTCGCCGTTTCAAGAATCCAACTATTTTTCTTAAGATTTCCTGTGATGCAGAATATGTCTTACCAATTATTGTTGGTATGTACTTTTAAATTTCTACTTGGACAACTAGCAGTGTCTTGTAAACAGTTATATCATACTGTTTTCATAACTCTTACTGCCTGCTACTTCAGGAGAACATGCTGTCGAAAAACTTATAGATTCATTGCATGAGGAGGAGACTGGGGTAATTTTTTTCAAGATTTTGAGAACGGATTTTCTGACTACTTTTCCTTATCTTTCTCTTAACATTTCTTTGAGATGCTGACGTTGGGCCTGCTGCAGGATTGCCCCGACGAGTTCCTGCTTTTGAGGAATCTATTGTTGAAATCTGGCTATGAAGTATGTCAATACCACTTTTTATCTATTTCATCATATGCATCCTTTCTCAATCTTGATTTTTTAATTATAAAGTAATATCAATCTTGATTTTAGCCATGTTTACTTTTAGCTTCTCTTTTTGAATTTGTTACCACATTCCCTGATATTAGAAACCTTTGGTTTTCAGAAGCATGTCATATATTCAAATGTTCATATTTTTAAGTTTTATATATTGAAATGAAACTTTAGGAGGCGGCCATTAACTCTTTCTGCTTATCTTTTAGCTGCCAGTTCATGATACTAATATGCTTTTACCAAGTATCATGAAAAGTTCTTACTGGTTACTTTTACTTGTAACATGGCAAGTGAGCAGGAGGCGGCTACTCCTCACTTACTTCTACGTGTTTGTAAGATGTAACACTTCCTTTGAGATGTGATCACCTTTAAATTGGGGAAACAGACACAGACACCGCGCCTTTAATTGTTGTTTGAAGTGCTAGTCTTACTTTCTTAATTTGGTGATGTATCATTTCTAGGTTAAAATGGTGAAGATTACAGAAAGAGTGACTAGTACTTATTTTGCCAGAATATTTTTCCACAAGGTATGTTCAAAATACTTTGTTCGTAGATTGAAAATATACTCCTACTTCTGTAATTGCATTTAATCTGAATTTAACATTTTTGATAATACCCAGGCAGGGGAAAA</genome_strand>
        <mrna_strand>TATTTTTGTCTTCTCCACCTAATTTATTTTATCCCTAAATCCCCCCCTTTTTTTTTCCTCCTCTCTCTGTAAACCCACATTGAATTTATTGTCTAACAATGCTCGGCGTTGAGTTAAGGATCTCCACCGTCGCCGGAGTTTTCACCGATCTACCGGAAACAAGTCGCCGGAGTGCCAGCTGGAACTGTAACTCCTCCATTGGAAATATCTCATATCATCTCTCTTCCAGAAATAGGCATTGTAGAAAGTCCAGATTCATGGTAATCTGTAGCAAGTCATCACGCGGAAGCTTTAATCGGAAATCTAATCAGAGTGATGAACCGGGTGATGATTATATTGAAGCTGTCGTTCTCGTTTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTATGAAGCACTACAAAATGCATATGGGTGGATTTCAAGAAGAAACAAGATGGCACTCATCTGCTCAGCTGATTCCCTCTTCTTTTCATCCTAAGGATCGTATTGCTAATGCATCATCTTTAGGGACAGGATTTCTTCGCCGTTTCAAGAATCCAACTATTTTTCTTAAGATTTCCTGTGATGCAGAATATGTCTTACCAATTATTGTTG...............................................................................................GAGAACATGCTGTCGAAAAACTTATAGATTCATTGCATGAGGAGGAGACTGGG..................................................................................................GATTGCCCCGACGAGTTCCTGCTTTTGAGGAATCTATTGTTGAAATCTGGCTATGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAATGGTGAAGATTACAGAAAGAGTGACTAGTACTTATTTTGCCAGAATATTTTTCCACAAG.............................................................................................GCAGGGGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M9217-2" ref_strand="+" ref_description="SGN-M9217-2 C2_At5g66050-2 [cosii_markers]">
      <seq>caagaatccaactatttttcttaagatttcctgtgatgcagaatatgtcttaccaattattgttggagaacatgctgtcgaaaaacttatagattcattgcatgaggaggagactggggattgccccgacgagttcctgcttttgaggaatctattgttgaaatctggctatgaagttaaaatggtgaagattacagaaagagtgactagtacttattttgccagaatatttttccacaaggcaggggaaaaaaatatttttagtgtggatgctcgcccctcagatgccattaatgttgccagaagatgtaaggcaccaatatttgtgaataagcaaattgtcttgactgatgcaacaagaataggttatggaatggaccgatctagcagaattaagtccacctatgatgtattattagatagtgcatcagatggccccgatttactttctgaagaacttagtgtgctgagaaatatgaacttagcagtgaatgaggagaggtacaatgatgcagctatgtggaaggacaaactgatgagacttcgtgagttcaagacatgagctctacaatctttatccagaaataaaatgtaaatattccttctggattgatggcagctatgacactgcactgtatttcaacatcacattaaccaatgtttcaaggaatcaataatcttcagggnaagtttgaaaattattgggtgtgtacatgttcccccttgttttagaaatctttgaaagtaaatgccttacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="13833" stop="16764"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14133" g_stop="14197" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="65" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14198" i_stop="14292" i_length="95">
            <donor d_prob="0.433" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14293" g_stop="14345" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="66" r_stop="118" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14346" i_stop="14443" i_length="98">
            <donor d_prob="0.796" d_score="1.00"/>
            <acceptor a_prob="0.519" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14444" g_stop="14500" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="175" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14501" i_stop="15015" i_length="515">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="15016" g_stop="15081" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="241" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="15082" i_stop="15174" i_length="93">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="15175" g_stop="15246" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="313" r_length="72" r_score="0.944"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="15247" i_stop="15649" i_length="403">
            <donor d_prob="0.954" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="15650" g_stop="15759" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="423" r_length="110" r_score="0.982"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="15760" i_stop="15833" i_length="74">
            <donor d_prob="0.985" d_score="0.98"/>
            <acceptor a_prob="0.753" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="15834" g_stop="15925" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="515" r_length="92" r_score="0.978"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="15926" i_stop="16027" i_length="102">
            <donor d_prob="0.976" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="16028" g_stop="16094" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="516" r_stop="582" r_length="67" r_score="0.955"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="16095" i_stop="16283" i_length="189">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.981" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="16284" g_stop="16464" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="583" r_stop="758" r_length="176" r_score="0.823"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-M9217-2" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-M9217-2" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14133" e_stop="14197"/>
          <exon e_start="14293" e_stop="14345"/>
          <exon e_start="14444" e_stop="14500"/>
          <exon e_start="15016" e_stop="15081"/>
          <exon e_start="15175" e_stop="15246"/>
          <exon e_start="15650" e_stop="15759"/>
          <exon e_start="15834" e_stop="15925"/>
          <exon e_start="16028" e_stop="16094"/>
          <exon e_start="16284" e_stop="16464"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGAATCCAACTATTTTTCTTAAGATTTCCTGTGATGCAGAATATGTCTTACCAATTATTGTTGGTATGTACTTTTAAATTTCTACTTGGACAACTAGCAGTGTCTTGTAAACAGTTATATCATACTGTTTTCATAACTCTTACTGCCTGCTACTTCAGGAGAACATGCTGTCGAAAAACTTATAGATTCATTGCATGAGGAGGAGACTGGGGTAATTTTTTTCAAGATTTTGAGAACGGATTTTCTGACTACTTTTCCTTATCTTTCTCTTAACATTTCTTTGAGATGCTGACGTTGGGCCTGCTGCAGGATTGCCCCGACGAGTTCCTGCTTTTGAGGAATCTATTGTTGAAATCTGGCTATGAAGTATGTCAATACCACTTTTTATCTATTTCATCATATGCATCCTTTCTCAATCTTGATTTTTTAATTATAAAGTAATATCAATCTTGATTTTAGCCATGTTTACTTTTAGCTTCTCTTTTTGAATTTGTTACCACATTCCCTGATATTAGAAACCTTTGGTTTTCAGAAGCATGTCATATATTCAAATGTTCATATTTTTAAGTTTTATATATTGAAATGAAACTTTAGGAGGCGGCCATTAACTCTTTCTGCTTATCTTTTAGCTGCCAGTTCATGATACTAATATGCTTTTACCAAGTATCATGAAAAGTTCTTACTGGTTACTTTTACTTGTAACATGGCAAGTGAGCAGGAGGCGGCTACTCCTCACTTACTTCTACGTGTTTGTAAGATGTAACACTTCCTTTGAGATGTGATCACCTTTAAATTGGGGAAACAGACACAGACACCGCGCCTTTAATTGTTGTTTGAAGTGCTAGTCTTACTTTCTTAATTTGGTGATGTATCATTTCTAGGTTAAAATGGTGAAGATTACAGAAAGAGTGACTAGTACTTATTTTGCCAGAATATTTTTCCACAAGGTATGTTCAAAATACTTTGTTCGTAGATTGAAAATATACTCCTACTTCTGTAATTGCATTTAATCTGAATTTAACATTTTTGATAATACCCAGGCAGGGGAAAAAGATATTATTAGTGTGGATGCTCGTCCCTCCGATGCCATTAATGTTGCCAGAAGATGTAAGGTATTGTTCTTATGGGACTTTGAGATTCAAGTTTGATAATCAATCGCTTCATATAAATTGCTTACCATTGTAGAAAACATTATGTCTCCTGACTGTTTTCCATTTGACCTTTTTCCTAGCATCCTGAGATGAAAAGATTGATCTCTCTTCCTTGAGCCCAGAGTCTATCTGAAACAGCCTCTCTACCTTCCAAGGTAGGGGTAAGGTCGAATACACACGATCTCACTAGACCTACTTGTGAGATTCATAAGGACTTGTGGTAAAGTTTTATGTGTATGATCAACTTCTTTTCAGTTTTAGCTCCTGTTAGAATCAGTCTTATTAATCTCTCTTGAGCTGTAATGCCCCACCTACAAATTTTGACAGCCGTTATCTGTAATTGAGCTTGTTCTGGTTTATGCAGGCACCAATATTTGTGAATAAGCAAATTGTCTTGACTGATGCAACTAGAATAGGTTATGGAATGGACCGATCTAGCAGAATTAAGTCCACCTATGATGTATTACTAGATAGGTTGGTCTCTTTTCTCTCCTATGTACATTTCTTTGGACTTTCTCCAAACTTAAGACTAATTCTGTTTGGCGCAGTGCATCAGATGGCCCCGATTTACTTTCTGAAGAACTTAGTATGTTGAGAAATATGAACTTAGCAGTGAATGAGGAGAGGTACAATGATGCAGGTACATCAAAGTAAACTTATAATTATTTTGGTGGAAGCATCTGCTATAGTTTTTCTGTAATTAATTTGTTGACACATCACCTATATTTTCTGGTTCCTGCAGCTGTGTGGAAGGACAAACTGATGAGACTTCGTGAGTTCAAGACATGAGCTCTAAAATCTTTCTCCAGGTACATCTTTCTACTGTTCAATGAAAGAGTTCTTTGATTACATTAATAGTGTCATGGAATGAGAATATTTATATTATGTTGGATTATGGATATAGTATTCATCTGGCTCTTGAAAATTTACATTATTCTACAATGCACATCTTTCAAATTTTGCTGCTATCCGTTGAAACTCTCTCCTTGTCTTTTCAGAAATAAAATGTAAATATTCCTTCTGGATTGATGGCAGCTATGACACCGCGCTATATTTCAACTTTTCAGTATCACATTAACAAAAGTTTGGAGGAATCAATAATCTTCAGGG-AAGTTCAAGTATTATT-ATTGTGTACATGTT-CCCCTTGCTGTAGAAATCTCGAAAAGTAAATGCCTTACC</genome_strand>
        <mrna_strand>CAAGAATCCAACTATTTTTCTTAAGATTTCCTGTGATGCAGAATATGTCTTACCAATTATTGTTG...............................................................................................GAGAACATGCTGTCGAAAAACTTATAGATTCATTGCATGAGGAGGAGACTGGG..................................................................................................GATTGCCCCGACGAGTTCCTGCTTTTGAGGAATCTATTGTTGAAATCTGGCTATGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAATGGTGAAGATTACAGAAAGAGTGACTAGTACTTATTTTGCCAGAATATTTTTCCACAAG.............................................................................................GCAGGGGAAAAAAATATTTTTAGTGTGGATGCTCGCCCCTCAGATGCCATTAATGTTGCCAGAAGATGTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................GCACCAATATTTGTGAATAAGCAAATTGTCTTGACTGATGCAACAAGAATAGGTTATGGAATGGACCGATCTAGCAGAATTAAGTCCACCTATGATGTATTATTAGATAG..........................................................................TGCATCAGATGGCCCCGATTTACTTTCTGAAGAACTTAGTGTGCTGAGAAATATGAACTTAGCAGTGAATGAGGAGAGGTACAATGATGCAG......................................................................................................CTATGTGGAAGGACAAACTGATGAGACTTCGTGAGTTCAAGACATGAGCTCTACAATCTTTATCCAG.............................................................................................................................................................................................AAATAAAATGTAAATATTCCTTCTGGATTGATGGCAGCTATGACACTGCACTGTATTTCAA-----C---ATCACATTAACCAATGTTTCAAGGAATCAATAATCTTCAGGGNAAGTTTGAAAATTATTGGGTGTGTACATGTTCCCCCTTGTTTTAGAAATCTTTGAAAGTAAATGCCTTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M8483" ref_strand="+" ref_description="SGN-M8483 C2_At4g35770 [cosii_markers]">
      <seq>aaaaaaaccctcctgtcttcacccataaatatcaatctccctttcatttctcaccatcaaacaaaataattgaacaacttccacaggaacaaacaatcatgagaactatttcccttcattcaacctcattttcacttgttgagttccatggtaccaagaatttggcacaaagcaggatcaatagatcggtttcgttgattccaatggcgaggtctcaatttcagcctaaaataagacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcacaactccacggttcctacttctgttcctgttcgagttgcacttgaattgcttcaagctggccatcgttatttagatgtcagaactactgaggagtacaatgatgggcatgctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaatttcttggaggaagtgttggaacaattcgggaaggatgatgagattatagttggatgccagttgggtaagagatcatttatggctgcaactgaacttcttgctgctggatttactggggtgactgacattgctggtggatatgctgcgtggacagagagtggacttccgattgagtcttgaaggccttttatttactcacatataaaaagggtagatttttaaataagtacacaccagtagtcaacatggcgaaatcaattccctttcttcacatcaaaaattagaaggagcaacttgcaaaatctcttgtacagtaatttatagcaggtgatgatgatattcgatgtgggagaatctgtattgcaagaaatatgtgtaaatattgttctcctaattctgctataataaataatatttgcctgaaaggcctctcatctgctcaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52779" stop="49529"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52479" g_stop="52308" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="172" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52307" i_stop="52204" i_length="104">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.429" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52203" g_stop="52102" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="274" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52015" g_stop="51905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="385" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51765" g_stop="51692" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="459" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50577" g_stop="50507" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="460" r_stop="530" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="50399" g_stop="50346" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="531" r_stop="584" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177">
            <donor d_prob="0.927" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="50168" g_stop="49833" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="585" r_stop="920" r_length="336" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="921" polyA_stop="939"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-M8483" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>920</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-M8483" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52479" e_stop="52308"/>
          <exon e_start="52203" e_stop="52102"/>
          <exon e_start="52015" e_stop="51905"/>
          <exon e_start="51765" e_stop="51692"/>
          <exon e_start="50577" e_stop="50507"/>
          <exon e_start="50399" e_stop="50346"/>
          <exon e_start="50168" e_stop="49833"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAACCCTCCTGTCTTCACCCATAAATATCAATCTCCCTTTCATTTCTCACCATCAAACAAAATAATTGAACAACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAGGTATATTTATATGCATTGAAAATTTTCGATTGAGTTCATTTTTTCTTCTTCTTCCAATGGGTGTTTCTTTTAACTCTGTTTTGTGATTTGAATGCTACTAGCAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCTGTAAGTCCCTTGCATAATACAGCTTTAGAATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAATCCCAAAGTAATTTCGGCCAAAAATTAAGAGTCTTAGAACGTGTAAAAGATTGAATTGTGATGTAATAAATCGACACATCTCATTAACTGCCTGCTATATATTGTGCAGGGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAGGCCTCTCATCTGCTC</genome_strand>
        <mrna_strand>AAAAAAACCCTCCTGTCTTCACCCATAAATATCAATCTCCCTTTCATTTCTCACCATCAAACAAAATAATTGAACAACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG........................................................................................................CAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG...........................................................................................................................................AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT.................................................................................................................................................................................GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAGGCCTCTCATCTGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M1578" ref_strand="+" ref_description="SGN-M1578 T0740 [cos_markers]">
      <seq>tctggctgagatggaatactttacagcagatatcacatcagagtctacaccttttgctatatccctagcgaaacacctgcattcaattggggcaaaaatgtatggggctttctggtgttctcactgccaggaacaaaagcagatgtttggacgagaagcagcaaagttactagactatgtagaatgctttccttatggacttaagaggggaatttctatgatcaatgcatgtcaagaagcaaaactcgaagggttccctacatgggttatcaatggggaggttcttagcggagagaagaagctttcagagctggctgcactgtctggtttcgatatgaaagaagaacttactgaggctaaatgagctctgttgatcaacagtcacatactcttaggatatctaagtttatgaattcttataactgccctctggtatttacttagtttcataatgtaattaccttcttatgttagtaaaactgaataggtagtatgataaagtgaaggatccgagtggatcatcttctgagtaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="61108" stop="63080"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61408" g_stop="61549" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="142" r_length="142" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61550" i_stop="62250" i_length="701">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.720" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62251" g_stop="62388" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="280" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62389" i_stop="62518" i_length="130">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.874" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62519" g_stop="62767" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="529" r_length="249" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="532" polyA_stop="544"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-M1578" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-M1578" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61408" e_stop="61549"/>
          <exon e_start="62251" e_stop="62388"/>
          <exon e_start="62519" e_stop="62767"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGGCTGAGATGGAATACTTTACAGCAGAGATCACATCAGAGTCTACACCTTTTGCTATATCCCTAGCGAAACACCTGCATTCAATTGGGGCAAAAATGTATGGGGCTTTCTGGTGTTCTCACTGCCAGGAACAAAAGCAGGTTCTCTTTCTTTTGCAAATGTGCTTTCTTAGTACTGCATTTTGATGGGTTTCTCAAAAAAAAAAAAAAAACTGCATATGAAAATGATGTTTTTTCTAAAATTATTTCCTTTTTGGTTGCCTCAATGGCATAGTGACATCATTTCATTAGGCAAAAAAAAAGATTCAGAGAAAGAAATACTTGCATACATAGAAAATGGGAAAGTAAAATCTTTCCCCATTATCAAATCTGACATGATGTAGGTAGGGTGAAGCGTGGATGTTGATTGGACTCCAGCCACGTTGTCTGATTGCTACATTCCTAAAGTAACATTCTATAAGGGAAAAGACAAAACATGATATGGGTAGGGAAGAATATGAATATGCATCAACTACTATTGGGTTGAATATTAACGTCTTCCGTAAAATAAGTAAGAGCATCATTAAAGGGAAAAAGAGAGACCCTTATATTTCCTTCTTTCGTATACTGGTGCTGGAATTTGGCTAAGAGCTTCTGTGGATTAATCTTTAAAGGTCAGAAGCAGATACTCAGAGTTCTGACCCCAACTGTTTGTCAATATTGCAACTAAACATTAAGAATATAAAAAATGGCCTTAAAGATCCCACTAGAAATTCTGATTTGCATTATGCACTTAGCAGTATAGGTAAGAGTTGGCTTGTATTCTGTACTAAATTGGTATATTCTTGTGTCACTGCAACAAGATGTTTGGACGAGAAGCAGCAAAGTTACTAGACTATGTAGAATGCTTTCCTTATGGACTTAAGAGGGGAATTTCTATGATCAATGCATGTCAAGAAGCAAAACTCGAAGGGTTCCCTACATGGGTTATCAATGGGGAGGTGAGCAAGAACCTTCTTCATGCTAGAAAAATATTTTGTAACCTATACAAAAGGCACCAGTCATTCACACGTTCGATAAGAAAATGAACATCTTGCTGTGAGGGACCTTATAACTATAATATTCTGGCAGGTTCTTAGCGGAGAGAAGAAGCTTTCAGAGCTGGCTGCACTGTCTGGTTTCGATATGAAAGAAGAACTTACTGAGGCTAAATGAGCTCTGTTGATCAACAGTCACATACTCTTAGGATATCTAAGTTTATGAATTCTTATAACTGCCCTCTGGTATTTACTTAGTTTCATAATGTAATTACCTTCTTATGTTAGTAAAACTGAATAGGTAGTATGATAAAGTGAAGGATCCGAGTGGATCATCTTCTGA</genome_strand>
        <mrna_strand>TCTGGCTGAGATGGAATACTTTACAGCAGATATCACATCAGAGTCTACACCTTTTGCTATATCCCTAGCGAAACACCTGCATTCAATTGGGGCAAAAATGTATGGGGCTTTCTGGTGTTCTCACTGCCAGGAACAAAAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTTGGACGAGAAGCAGCAAAGTTACTAGACTATGTAGAATGCTTTCCTTATGGACTTAAGAGGGGAATTTCTATGATCAATGCATGTCAAGAAGCAAAACTCGAAGGGTTCCCTACATGGGTTATCAATGGGGAG..................................................................................................................................GTTCTTAGCGGAGAGAAGAAGCTTTCAGAGCTGGCTGCACTGTCTGGTTTCGATATGAAAGAAGAACTTACTGAGGCTAAATGAGCTCTGTTGATCAACAGTCACATACTCTTAGGATATCTAAGTTTATGAATTCTTATAACTGCCCTCTGGTATTTACTTAGTTTCATAATGTAATTACCTTCTTATGTTAGTAAAACTGAATAGGTAGTATGATAAAGTGAAGGATCCGAGTGGATCATCTTCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M8794" ref_strand="-" ref_description="SGN-M8794 C2_At5g22130 [cosii_markers]">
      <seq>tttgggcttatttctggagctttgttctttctccttactgggattttcttctttttatatggctgcgatttcttgcatgaagcactgctctatcatctcacacgtacagaccctaggcacaatttctcaatttatttctaccatatatatctgcactatgaacatgagttatctatcttggaaaagctcgtctcgtttctgcctcagattatggtgcagctagttcttgttttccgctttgcacaagattttccattttgcttctttgtgcagactgtggcatttgtcgcatttaacaaggttatgactgctcaatactttgtttggttcttctgtctcttgccactaatcctgccatggaccaacatgaagctcggaggaaaaggactggtctgcatcttgttgtggatggcagctcagggtcactggttattgtggggttatttgcttgaatttaaaggaaagaatgtctttcttcaactctgggtggcaggtttgctgttcttggctgcaaatactttcgttcttatcaatattattcagcaacacacatatagtcccgtcttccaacagtcatctcgtgcctcttcaaagaaacaagtcaaacagagatgaggaatcagatcatatacctcctaattcactgggggaggaattttcgagctagtagtgtatttagccatattcggtacttgtagagcctttcatcatcaggcaaagcacttggcttattcatagctccatgcttaaaaataccttcactaaagatgtagcaagagatcgttattttgaagttttggtcgttttgcttttagagcatacggaatgatagcaatttacaatttgtttgttgcatttggtataagtttaattcagttaacctctcaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="65510" stop="67091"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65810" g_stop="66109" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="300" r_length="300" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66110" i_stop="66204" i_length="95">
            <donor d_prob="0.912" d_score="1.00"/>
            <acceptor a_prob="0.414" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66205" g_stop="66790" g_length="586"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="886" r_length="586" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="887" polyA_stop="900"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-M8794" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>886</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-M8794" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="65810" e_stop="66109"/>
          <exon e_start="66205" e_stop="66790"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGGGCTTATTTCTGGAGCTTTGTTCTTTCTCCTTACTGGGATTTTCTTCTTTTTATATGGCTGCGATTTCTTGCATGAAGCACTGCTCTATCATCTCACACGTACAGACCCTAGGCACAATTTCTCAATTTATTTCTACCATATATATCTGCACTATGAACATGAGTTATCTATCTTGGAAAAGCTCGTCTCGTTTCTGCCTCAGATTATGGTGCAGCTAGTTCTTGTTTTCCGCTTTGCACAAGATTTTCCATTTTGCTTCTTTGTGCAGACTGTGGCATTTGTCGCATTTAACAAGGTTTGTTGGCAAGGCTTGATTATTTTTTATGTTGAGAATCAGTGAATATTAGCTTGATTTTCCTTTAGCAAGATAACGTTCTTTTCCTCTGACAGGTTATGACTGCTCAATACTTTGTTTGGTTCTTCTGTCTCTTGCCACTAATCCTGCCATGGACCAACATGAAGCTCGGAGGAAAAGGACTGGTCTGCATCTTGTTGTGGATGGCAGCTCAGGGTCACTGGTTATTGTGGGGTTATTTGCTTGAATTTAAAGGAAAGAATGTCTTTCTTCAACTCTGGGTGGCAGGTTTGCTGTTCTTGGCTGCAAATACTTTCGTTCTTATCAATATTATTCAGCAACACACATATAGTCCCGTCTTCCAACAGTCATCTCGTGCCTCTTCAAAGAAACAAGTCAAACAGAGATGAGGAATCAGATCATATACCTCCTAATTCACTGGGGGAGGAATTTTCGAGCTAGTAGTGTATTTAGCCATATTCGGTACTTGTAGAGCCTTTCATCATCAGGCAAAGCACTTGGCTTATTCATAGCTCCATGCTTAAAAATACCTTCACTAAAGATGTAGCAAGAGATCGTTATTTTGAAGTTTTGGTCGTTTTGCTTTTAGAGCATACGGAATGATAGCAATTTACAATTTGTTTGTTGCATTTGGTATAAGTTTAATTCAGTTAACCTCTC</genome_strand>
        <mrna_strand>TTTGGGCTTATTTCTGGAGCTTTGTTCTTTCTCCTTACTGGGATTTTCTTCTTTTTATATGGCTGCGATTTCTTGCATGAAGCACTGCTCTATCATCTCACACGTACAGACCCTAGGCACAATTTCTCAATTTATTTCTACCATATATATCTGCACTATGAACATGAGTTATCTATCTTGGAAAAGCTCGTCTCGTTTCTGCCTCAGATTATGGTGCAGCTAGTTCTTGTTTTCCGCTTTGCACAAGATTTTCCATTTTGCTTCTTTGTGCAGACTGTGGCATTTGTCGCATTTAACAAG...............................................................................................GTTATGACTGCTCAATACTTTGTTTGGTTCTTCTGTCTCTTGCCACTAATCCTGCCATGGACCAACATGAAGCTCGGAGGAAAAGGACTGGTCTGCATCTTGTTGTGGATGGCAGCTCAGGGTCACTGGTTATTGTGGGGTTATTTGCTTGAATTTAAAGGAAAGAATGTCTTTCTTCAACTCTGGGTGGCAGGTTTGCTGTTCTTGGCTGCAAATACTTTCGTTCTTATCAATATTATTCAGCAACACACATATAGTCCCGTCTTCCAACAGTCATCTCGTGCCTCTTCAAAGAAACAAGTCAAACAGAGATGAGGAATCAGATCATATACCTCCTAATTCACTGGGGGAGGAATTTTCGAGCTAGTAGTGTATTTAGCCATATTCGGTACTTGTAGAGCCTTTCATCATCAGGCAAAGCACTTGGCTTATTCATAGCTCCATGCTTAAAAATACCTTCACTAAAGATGTAGCAAGAGATCGTTATTTTGAAGTTTTGGTCGTTTTGCTTTTAGAGCATACGGAATGATAGCAATTTACAATTTGTTTGTTGCATTTGGTATAAGTTTAATTCAGTTAACCTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M8482" ref_strand="+" ref_description="SGN-M8482 C2_At4g35750 [cosii_markers]">
      <seq>ctatataaatcctctccgcccttctttctcatatctcatcccacaacaaacgtagcgttttgcttttgcaacaatcgagattcaaaaaaccatgtttacagaagttgaacaacaacagcatatagagaaactcgaaatattcaagatccaaggcagagataaacgtggccgcaaaattttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagttgtgaacaagtatttagcggagaagatctttccggaacttgagaaaaggccgttcgccgtggtgtatgttcacaccgatgtggagaaaagcgagaatttccccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggaggctatttactttcttcaccctggtcttcaagccaggctcttccttgccacatttggtcgcttcatcttcagcggagggttatatgggaaattgaggtatgtgagcagggttgataatctgtgggagcatgtgaggaggaatgagattgggatgccagaatttgtgtacgatcatgatgaagatcttgagtaccgtccgatgatggactatggcctggagagtgatcatgccagggtctatggcgatgcgcctgccgtagactcacctgttacaatgtactccatgagatgcatctcataagataattggaagccttttgcagtcttttcggttcatagttagatgtgtaggaacctcatggctttcttttttcttcctccatctgatgcaatttttttgctctgtatatacgattagatggaggttagcaactagcaagcacttttttcttcttgttgttgttatatagtaatagtacaaaggtcatcaactttgaaagcaatgatgatttcctatctgaaaaatcctggaatgttgttatctttcttctggaagatgaatatatatacttttatgaggaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72352" stop="120297"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72652" g_stop="72857" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="206" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73216" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="471" r_length="265" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73357" g_stop="73859" g_length="503"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="974" r_length="503" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="73860" i_stop="73960" i_length="101">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.635" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73961" g_stop="73977" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="975" r_stop="991" r_length="17" r_score="0.471"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-M8482" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>991</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-M8482" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72652" e_stop="72857"/>
          <exon e_start="72952" e_stop="73216"/>
          <exon e_start="73357" e_stop="73859"/>
          <exon e_start="73961" e_stop="73977"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATATAAATCCTCTCCGCCCTTCTTTCTCATATCTCATCCCACAACAAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTTTTTTCTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTTTTTTCTTCTTGTTGTTGTTATATAGTAATAGTACAAAGGTCATCAACTTTGAAAGCAATGATGATTTCCTATCTGAAAAATCCTGGAATGTTGTTATCTTTCTTCTGGAAGATGAATATATATACTTTTATGAGGAGTATTGTGTTGTGGTCTGATCAAGAAAATAAAATGAAGTAGAAGAATCGTAAGACTGGTTTTTAATTTCATCGAGTATATATAGTGCTTGTCCTCTATCAGTGAATAATGATTAGCAA</genome_strand>
        <mrna_strand>CTATATAAATCCTCTCCGCCCTTCTTTCTCATATCTCATCCCACAACAAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTTTTTTCTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTTTTTTCTTCTTGTTGTTGTTATATAGTAATAGTACAAAGGTCATCAACTTTGAAAGCAATGATGATTTCCTATCTGAAAAATCCTGGAATGTTGTTATCTTTCTTCTGGAAGATGAATATATATACTTTTATGAGGA.....................................................................................................AAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M1586" ref_strand="+" ref_description="SGN-M1586 T0759 [cos_markers]">
      <seq>aaacgtagcgttttgcttttgcaacaatcgagattcaaaaaaccatgtttacagaagttgaacaacaacagcatatagagaaactcgaaatattcaagatccaaggcagagataaacgtggccgcaaaattttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagttgtgaacaagtatttagcggagaagatctttccggaacttgagaaaaggccggtcgccggggtgtatgttcacaccgatgtggagaaaagcgagaatttcccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72399" stop="73376"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72699" g_stop="72857" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="159" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73076" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="284" r_length="125" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-M1586" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>284</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-M1586" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72699" e_stop="72857"/>
          <exon e_start="72952" e_stop="73076"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCC</genome_strand>
        <mrna_strand>AAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGGTCGCCGGGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M8482-2" ref_strand="+" ref_description="SGN-M8482-2 C2_At4g35750-2 [cosii_markers]">
      <seq>tttacttttgcaacaatctctaatcgaaattctaaaaaccatgtttacagaagttgaacaagaacagcttattgagaaactcgaaatcttcaagatccaaggcagagataaacgtggccgcaaaactttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagtagtgaacaagtatttagcggagaagatctttccagaacttgagaaaaggccgttcgccgtggtgtatgttcacaccgatgtggagaaaagcgagaattttcccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggagggtgtttactttcttcaccctggccttcaagccaggctcttccttgccacatttggtcgcttcatcttcagcggagggttatatgggaaattgaggtatgtgagcagggttgataatctgtgggaacatgtgaggaggaatgagattgggatgccagaatttgtgtacgatcatgatgaagatcttgagtaccgtccgatgatggactatggcctggagagtgatcatgccagggtctatggtgatgcgcctgcagtagactcacctgttacaatgtactccatgagatgcatctcataagataattggaagccttttgcagtcttttcggttcatagttagatgtgtaggaaacttgtgggtttcttcttttttcttcctccatctgattgaatttttctgggctgtatatatgattagatggaggttagcaactagcaagcacttcttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72424" stop="74028"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72724" g_stop="72857" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="155" r_length="134" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73216" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="420" r_length="265" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73357" g_stop="73728" g_length="372"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="796" r_length="376" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-M8482-2" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>771</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-M8482-2" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72724" e_stop="72857"/>
          <exon e_start="72952" e_stop="73216"/>
          <exon e_start="73357" e_stop="73728"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTT-TTTT--CTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTT-TTTTC</genome_strand>
        <mrna_strand>AATCGAAATTCTAAAAACCATGTTTACAGAAGTTGAACAAGAACAGCTTATTGAGAAACTCGAAATCTTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAACTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTAGTGAACAAGTATTTAGCGGAGAAGATCTTTCCAGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTTCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGGTGTTTACTTTCTTCACCCTGGCCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAACATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGTGATGCGCCTGCAGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAAACTTGTGGGTTTCTTCTTTTTTCTTCCTCCATCTGATTGAATTTTTCTGGGCTGTATATATGATTAGATGGAGGTTAGCAACTAGCAAGCACTTCTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M7219-2" ref_strand="+" ref_description="SGN-M7219-2 C2_At2g17695-2 [cosii_markers]">
      <seq>caattccaaatctctcatcttcatcggctcactgccactgttacctcagtgccggcggtggactctccgaaaaatttagtgaattctttacaggttaagtacttgatggtatttcttagctggacgcgtccatctcctgaagagcagaaagcatgtatcaacaagtctggttcctttaactatgataaaagatttagaggaactactgagaaacctgctcctctacttaagcaagacagtgagcttgcaaaggatggtttctctgttaattgtgctcgagtattagtcggttcaggccgtgagacttttgaaaagggaaaagctgcccttcaaaattggaggcattttggattgaattgggcgtttgttgatccaaaagctcaaattcaaagtgggacaaagttctgtgtttgtgtgaaggagttcttcccgtggcttatgatgcctctacaggttgtttatgttagcgagaacaagaactcgaaaaagggggcttcgtttagttttggcagtggaactctgcaaggacatttgctggctggtgaagaacgtttttcaatagcattggacgaaaatgatctagtttggtacgagatactttccttctcgaagcctgcacatttgctgtcactctttggatacccttatgttcttctaaggcaaaagtactttgctcatcaatcaggtagtgcggtgaagaaacatttatctgcttaaaacatgtgaggctataactgtgtgtgaacaggaactctttgttgtaaaagattcccatccatagttatgttgggtcttcatttcatgtatatttctttgcattatatgcacgacctagttactaataatgcaattctagtccttgttaaagaaaaatgtaattgtagtccaatagctggataatcagtgtgatttaattaagtgaatgcatagaagaaaaactatgcataagaacccaatagcgagaatcatttcaagaaagggtcattccattctaaaaaaaaaaaaaaaaggaaaaaaaaaactcgaggggggcccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="101942" stop="104309"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102242" g_stop="102310" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102311" i_stop="102413" i_length="103">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102414" g_stop="102508" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="164" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102509" i_stop="102748" i_length="240">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102749" g_stop="102925" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="341" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75">
            <donor d_prob="0.801" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103001" g_stop="103196" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="342" r_stop="537" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="103197" i_stop="103551" i_length="355">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="103552" g_stop="104010" g_length="459"/>
          <reference_exon_boundary r_type="cDNA" r_start="538" r_stop="996" r_length="459" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="997" polyA_stop="1010"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-M7219-2" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>996</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-M7219-2" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102242" e_stop="102310"/>
          <exon e_start="102414" e_stop="102508"/>
          <exon e_start="102749" e_stop="102925"/>
          <exon e_start="103001" e_stop="103196"/>
          <exon e_start="103552" e_stop="104010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTGGTCAGTTTGCTCTCCTTGTTGCAATTGTTTGTCTTACACTATACCTTTCAACTGTTCAGGTTTTCTGGTTATGATATCATTAGGTTCATTTCAATCTAGCTATATAAAATAAACATTAAGGATTTAAGATTATGTTTCCTTTACAAGCTGCTAACCCAGCCATTGCAAAAGGTTAATATTAGTAGTGGTAGTGTCTAAGTCCAACACAATGCTTACTAGAATGGTAATGTTTTGTCCTATTTTCCATGTTTGAAGTTTTAAGCTTACCATACATCTTAGACCTATCATTCTCCTTTATATTGCTGCATGTAAAACTTGACAATATATGAGTTTGTGATACCAAGTGTTTGAGCAGGCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGAACTCTTTGTTGTAAAAGATTCCCATCCATAGTTATGTTGGGTCTTCATTTCATGTATATTTCTTTGCATTATATGCACGACCTAGTTACTAATAATGCAATTCTAGTCCTTGTTAAAGAAAAATGTAATTGTAGTCCAATAGCTGGATAATCAGTGTGATTTAATTAAGTGAATGCATAGAAGAAAAACTATGCATAAGAACCCAATAGCGAGAATCATTTCAAGAAAGGGTCATTCCATTCTAAT</genome_strand>
        <mrna_strand>CAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCG.......................................................................................................AAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAA................................................................................................................................................................................................................................................GTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG...........................................................................GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTG...................................................................................................................................................................................................................................................................................................................................................................GCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGAACTCTTTGTTGTAAAAGATTCCCATCCATAGTTATGTTGGGTCTTCATTTCATGTATATTTCTTTGCATTATATGCACGACCTAGTTACTAATAATGCAATTCTAGTCCTTGTTAAAGAAAAATGTAATTGTAGTCCAATAGCTGGATAATCAGTGTGATTTAATTAAGTGAATGCATAGAAGAAAAACTATGCATAAGAACCCAATAGCGAGAATCATTTCAAGAAAGGGTCATTCCATTCTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M7219-3" ref_strand="+" ref_description="SGN-M7219-3 C2_At2g17695-3 [cosii_markers]">
      <seq>attccaaatctctcatcttcatctgctcactgtcactgttgcctcactgccggcggtggagtctccgaaaaatttagtgaattctttaccagattaagtacttgatggtatttcttagctggacgcgtccatctcctgaagagcagaaagcatgtatcaacaagtctggttcctttaacctatgataatagatttagaggagctacctgataaacctgctcctctacttaagcaagacagggagcttgcaaaggatggtttctctgttaattgtgctcgtgtattagtcggttcaggccgtgagacttttgagaagggaaaagctgcccttcaaaattggaggcattttggattgaattgggcgtttgttgatccaaaagctccaattcaaagtgggacaaagttctgtgtttgcgtgaaggagttcttcccgtggcttatgatgcctctgcaggtggtttatgtcaccgagaacaagaactcgaaaaagggtgcttcatttagttttggcggtggaactctccaaggacatttgctggctggtgaagaacgtttttcaatagcattggacgaaaatgatctagtttggtacgagatactttccttctcgaagcctgcacatctgctgtcactctttggatacccttatgttcttctcaggcaaaaatactttgctcatcaatcaggtagtgcggtgaagaaacatttatctgcttaaaacatgtggggctataactgtgtgtaaaaaaaatgctcttcattgtagacctgaaatcttagttgtaaaagattcccatccatagttatattgggtcttgatttcatgtttttttctttgcattatatgcacgacctagttactaataatgcaattctagtccttgttaaagaaactgtaattgtagtccaatagctggataatcagtgtgacataattaagtgaatgcatagaagaaaaactatgcataagaacccaatagcgagaatcatttcaagaaaaggtcattccattctagtaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="101944" stop="104315"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102244" g_stop="102310" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="67" r_length="67" r_score="0.925"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102311" i_stop="102413" i_length="103">
            <donor d_prob="0.941" d_score="0.90"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102414" g_stop="102508" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="163" r_length="96" r_score="0.968"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102509" i_stop="102748" i_length="240">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102749" g_stop="102925" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="342" r_length="179" r_score="0.944"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75">
            <donor d_prob="0.801" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103001" g_stop="103196" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="538" r_length="196" r_score="0.949"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="103197" i_stop="103551" i_length="355">
            <donor d_prob="0.980" d_score="0.92"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="103552" g_stop="104010" g_length="459"/>
          <reference_exon_boundary r_type="cDNA" r_start="539" r_stop="1017" r_length="479" r_score="0.871"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-M7219-3" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>994</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-M7219-3" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102244" e_stop="102310"/>
          <exon e_start="102414" e_stop="102508"/>
          <exon e_start="102749" e_stop="102925"/>
          <exon e_start="103001" e_stop="103196"/>
          <exon e_start="103552" e_stop="104010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTAC-AGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAA-CTATGATAAAAGATTTAGAGGAACTA-CTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTGGTCAGTTTGCTCTCCTTGTTGCAATTGTTTGTCTTACACTATACCTTTCAACTGTTCAGGTTTTCTGGTTATGATATCATTAGGTTCATTTCAATCTAGCTATATAAAATAAACATTAAGGATTTAAGATTATGTTTCCTTTACAAGCTGCTAACCCAGCCATTGCAAAAGGTTAATATTAGTAGTGGTAGTGTCTAAGTCCAACACAATGCTTACTAGAATGGTAATGTTTTGTCCTATTTTCCATGTTTGAAGTTTTAAGCTTACCATACATCTTAGACCTATCATTCTCCTTTATATTGCTGCATGTAAAACTTGACAATATATGAGTTTGTGATACCAAGTGTTTGAGCAGGCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGT-----GAA-------C-----AG----GAACTCTTTGTTGTAAAAGATTCCCATCCATAGTTATGTTGGGTCTTCATTTCATGTATATTTCTTTGCATTATATGCACGACCTAGTTACTAATAATGCAATTCTAGTCCTTGTTAAAGAAAAATGTAATTGTAGTCCAATAGCTGGATAATCAGTGTGATTTAATTAAGTGAATGCATAGAAGAAAAACTATGCATAAGAACCCAATAGCGAGAATCATTTCAAGAAAGGGTCATTCCATTCTAAT</genome_strand>
        <mrna_strand>ATTCCAAATCTCTCATCTTCATCTGCTCACTGTCACTGTTGCCTCACTGCCGGCGGTGGAGTCTCCG.......................................................................................................AAAAATTTAGTGAATTCTTTACCAGATTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAA................................................................................................................................................................................................................................................GTCTGGTTCCTTTAACCTATGATAATAGATTTAGAGGAGCTACCTGATAAACCTGCTCCTCTACTTAAGCAAGACAGGGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGTGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAGAAGGGAAAAGCTGCCCTTCAAAATTGGAG...........................................................................GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCCAATTCAAAGTGGGACAAAGTTCTGTGTTTGCGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTGCAGGTGGTTTATGTCACCGAGAACAAGAACTCGAAAAAGGGTGCTTCATTTAGTTTTGGCGGTGGAACTCTCCAAGGACATTTGCTG...................................................................................................................................................................................................................................................................................................................................................................GCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATCTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTCAGGCAAAAATACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGGGGCTATAACTGTGTGTAAAAAAAATGCTCTTCATTGTAGACCTGAAATCTTAGTTGTAAAAGATTCCCATCCATAGTTATATTGGGTCTTGATTTCATGTTTTTTTCTTTGCATTATATGCACGACCTAGTTACTAATAATGCAATTCTAGTCCTTGTTAAAG-AAACTGTAATTGTAGTCCAATAGCTGGATAATCAGTGTGACATAATTAAGTGAATGCATAGAAGAAAAACTATGCATAAGAACCCAATAGCGAGAATCATTTCAAGAAAAGGTCATTCCATTCTAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M7158" ref_strand="+" ref_description="SGN-M7158 C2_At2g04270 [cosii_markers]">
      <seq>gaaagtggtgatgcttgtgatattttagaagtccttgcagaaaattgtaatggtagtgtaactgagcatgggcttgaaactcattcagagaaatatccagaagaatccagtggaattgggtaccgagggcagaatccaactattgagcgtgctatgaatggtaagagaatttcacaaagagatgaaagcaagtgggtccaggtccgaaaaggcactaaaataattgtgcaagttgttaaagaaggattgggtacgaagggcccaacactgactgcttatccgaaattaaggagcagattctgggttttagttcctcgcggcaacacgataggtatttcaaagaagattgctggtgttgagcgcacacgtttaagggtcattgcaaaaactttacagcctcaaggatatggtcttacagtaaggacagttgcagctggtcattcactaaatgaattgcagaaggacttggaagggttgctttcaacttggaaaagtataattgagcatgcaaagtctgcagctcttgccgcagatgaaggtgttgatggagcagttcctgtcatgcttcaccaggcaatgggccaaacactttctgttgttcaagattattttagcgataaggtgaatagtttggtggttgattctccaaggacatatcatgaggttacaaactatcttcaagaaatggcacctaatctttgtgaaagagttgagttgcatggtacaagaactcccctgtttgatgaatacaacattgaggaagaaataaacaacattctcagcaaaagggttccccttgataatggaggttatttagtgatcgaacagacagaggctttagtctccatcgatgtaaatggtggacattgtgtgcttggtcaagggacttcacaagagatggctattctcaatgttaaccttgcagctgctagacagattgctagggaaataaggctgagagacattggtggcattattgtggtggatttcatagatatgttggatgattcaaataagagattggtctatgaggaggtcaagaaggctgttgagagagatcgatctacagttaaggtgtctgaattgtccagacatgggcttatggagattaccaggaaaagagttcgacctagtgtgacattcatgatcagtgaaccatgtatgtgctgccatggtacggggagagtggaagctttagcgactgcatactctaagattgaacgtgaaatttgccggttgctatccacaacggatctgaaggcagaccctgaaaaccccaagtcttggcccagatttattctcagggtagatcagtacatgtctaactatttaacttcaggaaagaggacaaggctagcaatcttgagtagttctctcaaagtttggcttcttctaaaggttgctagaggttttaccaaagggacctttgagctaaaacctttaacaggcgacaaggagtacaagggtgatgaacgtgaaacatctatttcagtgttgcgaccaacagagggtggatttcacccccctcggaaaaaagtcaccatcttccccatcaaaaagtggagtagtggaaagtgatgttacctccattaagaatcatctgtacaggtctcaaaaaacaatgcaaatccacatatggttagcataaatttattagccaattctttcttccctcttgagtttttctcgtcggcttgtaagaaatagctagttttatgaggaaatcaattttgcatagcaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="132782" stop="1576"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="132482" g_stop="132180" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="303" r_length="303" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="132179" i_stop="132089" i_length="91">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.915" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132088" g_stop="131771" g_length="318"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="621" r_length="318" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="131770" i_stop="131639" i_length="132">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.906" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="131638" g_stop="131597" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="622" r_stop="663" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="131596" i_stop="130965" i_length="632">
            <donor d_prob="0.862" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="130964" g_stop="130840" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="664" r_stop="788" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="130839" i_stop="130710" i_length="130">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="130709" g_stop="130562" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="789" r_stop="936" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="130561" i_stop="129573" i_length="989">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="129572" g_stop="129500" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="937" r_stop="1009" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="129499" i_stop="128981" i_length="519">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="128980" g_stop="128868" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="1010" r_stop="1122" r_length="113" r_score="0.991"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="128867" i_stop="128777" i_length="91">
            <donor d_prob="0.848" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="128776" g_stop="128657" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="1123" r_stop="1242" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="128656" i_stop="128418" i_length="239">
            <donor d_prob="0.550" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="128417" g_stop="128262" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1243" r_stop="1398" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="128261" i_stop="128176" i_length="86">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="128175" g_stop="127833" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="1399" r_stop="1741" r_length="343" r_score="0.997"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="127832" i_stop="127141" i_length="692">
            <donor d_prob="0.698" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="127140" g_stop="127130" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="1742" r_stop="1752" r_length="11" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-M7158" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1752</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-M7158" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="132482" e_stop="132180"/>
          <exon e_start="132088" e_stop="131771"/>
          <exon e_start="131638" e_stop="131597"/>
          <exon e_start="130964" e_stop="130840"/>
          <exon e_start="130709" e_stop="130562"/>
          <exon e_start="129572" e_stop="129500"/>
          <exon e_start="128980" e_stop="128868"/>
          <exon e_start="128776" e_stop="128657"/>
          <exon e_start="128417" e_stop="128262"/>
          <exon e_start="128175" e_stop="127833"/>
          <exon e_start="127140" e_stop="127130"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGTGGTGATGCTTGTGATATTTTAGAAGTCCTTGCAGAAAATTGTAATGGTAGTGTAACTGAGCATGGGCTTGAAACTCATTCAGAGAAATATCCAGAAGAATCCAGTGGAATTGGGTACCGAGGGCAGAATCCAACTATTGAGCGTGCTATGAATGGTAAGAGAATTTCACAAAGAGATGAAAGCAAGTGGGTCCAGGTCCGAAAAGGCACTAAAATAATTGTGCAAGTTGTTAAAGAAGGATTGGGTACGAAGGGCCCAACACTGACTGCTTATCCGAAATTAAGGAGCAGATTCTGGGTATTACATGTTTCATGATCATGTATTCTGTGTCTTACAGCTGAAAGTCCATTATTAGAAAACCCAATCTAATTGGTTCTCCTCTTCCCAGGTTTTAGTTCCTCGCGGCAACACGATAGGTATTTCAAAGAAGATTGCTGGTGTTGAGCGCACACGTTTAAGGGTCATTGCAAAAACTTTACAGCCTCAAGGATATGGTCTTACAGTAAGGACAGTTGCAGCTGGTCATTCACTAAATGAATTGCAGAAGGACTTGGAAGGGTTGCTTTCAACTTGGAAAAGTATAATTGAGCATGCAAAGTCTGCAGCTCTTGCCGCAGATGAAGGTGTTGATGGAGCAGTTCCTGTCATGCTTCACCAGGCAATGGGCCAAACACTTTCTGTTGTTCAAGATTATTTTAGCGATAAGGTCTGCTCATTCTCGGGTCATTACTTCATAATTTGTTCAGTTCTTTATTTTTTAGGCAACTTCTGTTCATGGGCTTTCTCAAATTAGCATGAAAACACAATTTTACTTTCTTACTCTAGCACTGATTTTCAGGTGAATAGTTTGGTGGTTGATTCTCCAAGGACATATCATGAGGTATGGACTTAGCCAGTTATCAGTCAATGGAATGAAAAGATTTTTGACCTACAAGCATGATTGCATGTCTTTCTCTTGCTTTAATGTTCCTCTAGGTTGATTTTTCACATGGAAGCGGTTTTACAATAGTGAGTGGTTTTTGGTATGAAGATTTGCATATACTGGCTATGAATGAGATTATCTTGGATTAAATTAAACCCAAGTTAATGAAACATTTAAGAAGTAAAATTAGCTTGTTTAAGAATAGCGCCCAGTGTGTGCAATGATGAGTAGCACTGCAATTAGTATCTCAGTACATTACGTTCTTATGAATAGAACTGATGACATTGATTTTCGTCTTTAAACTATAAGGGCATTTGTGCTTTAAGTTACAAATATTTTCCTTTTTGACTTTAAGTGTCCTGATTCCTTTCGCTTCACACAGTTCAGCATATAGTCGCGGCATAGTGTTCCACAACTTTTGTCGTCTTGTTGTGTCCTCTTTTATTCCAACTCTGCAAAAGTTATTTTGGAGATCTGTCATACACCAAATAGTCGCGGTTTGTGTTCCACTACCTGTGGGCTAAAATTGGTTGAGGAATTTTTTTAAAATTATGGTGTACCTTAATATAGATATATTGGACTCTGTTCAGGTTACAAACTATCTTCAAGAAATGGCACCTAATCTTTGTGAAAGAGTTGAGTTGCATGGTACAAGAACTCCCCTGTTTGATGAATACAACATTGAGGAAGAAATAAACAACATTCTCAGCAAAAGGTGGAGATCACTTTGTTTCTTTCTTTTAGCTTTATGTCTTTTATGACATGTATTTTAACTTCTCGTGAGTCAAAACGTTTCATGTTTCATTGATATTCCTCCTTAATCCTTTGATTTATAAAATTTGCAGGGTTCCCCTTGATAATGGAGGTTATTTAGTGATCGAACAGACAGAGGCTTTAGTCTCCATCGATGTAAATGGTGGACATTGTGTGCTTGGTCAAGGGACTTCACAAGAGATGGCTATTCTCAATGTTAACCTTGCAGCTGCTAGACAGGTATGTAGACCTGCATCTATTTTGATTACACATTGTATTCCAAGAGCATAGTCTTTCTACACCTGGGAAAGTTGGTTATCAGAAAACAAACTAGGATATGCTTAGAAGATCCTTTTTAATGAATTAGAAGATGCTTAGCGTTTGATGGAAATACTTCAATCCAACACTAAAATATGTCTCTTGACAAGCTACACTGCTTCTCTTTTTTCCTGTGGTAGACAAGGCCTCATTTGTAGCCTAGTAGTATCTTGTCAGATCCCAGAACAGAAGAATATTCTGTTGATGCACCTTCTATGGAGAATTAATTCTTTAAAAAAAAGAAACTACACAGGGTATCATGTCCATGTTGCCGTTTTAATCTGCTATTGGTTTGGACATAGCATGTCTGAATTACGTGCTAAACCTCTATTTTTTTTTCTTGGAGGGGATAACCAAGACATCCCTGAGCGTATGTGGATAATGTGCCCGCTCTCTACCTTTCTTCAGTTAAATACCACGCTTTTGTCATAGGAAGGTTCGATCTCTTCACGTGTCTAACCCACACATCACACATTGTGCTCTTACCACTAGACAAAACCAACGGGGATAATCTGTGGTTGCTTTTATGCACCTCTATTTAAGTCGCGTTAATTTGATCCAATTTAGCAGTCAGCCTGGGCTGCAGAATTACACACATTTTTAAAGAAGGAAGGAAGCAGAAACCAATCCAAATAAGCAAGTATCCATCATTCGAATTCAAAGAAATACTGCACTTCTAGTTTCATTGGGTGTTTCTGGTTAGATTTGAACCTTTTATCTGAGAAACCGAGCTAGTTACTGAAATGTACGACAACACAGGATTACATTGGATCTTTTTTGTTGATAAAGACAACATAGTATTGCATTGGTTTTCTTTCTATATGTTAAGTTTATTATTTGCGACAGATTCCCATTTTTTATTTTATCTGATAATTGTTGTCATTTATGTATATACTGAAAATTATTCTCAGATTGCTAGGGAAATAAGGCTGAGAGACATTGGTGGCATTATTGTGGTGGATTTCATAGATATGTTGGATGATTGTAAGTAAACAACCCTCTCTCCGCCCTTTCCCCTCCTCTCTATGTGTGTGTATGTGTCACAGGCGGATCCAAGACTAAATTTGATGAGTTCAACCTTTAAATTCTTAGCACAGAACTGAATGTTCTTCTAAAATTATGATGTGTGTGGTCTTTATGTGGTATTGATGCACAATATTTTGTTTAAATGGGATTACTACTGAAAATAAGAAAGAAAAAAGAAGAGACATAAATTTATATTATGGTCTTCTATGTAAATCTAAAATTGAAGTTAACCTTGTCGAATGCTTGGTAACTAAACGACATTATTTGTAGTACATAACACCTACTGTTCATCATCTAAAACCGGCATGTAATCAGACTGAAAGTTTCGTAATCAGTGCCATCCTACTATGCCTCTCTCTAAACTATATTAGACACTAAGCTCATGCCATATGATTTATAAGATGATAACTTGAAATCGTCAATACATTTTGAAGATGTAGTCCTCTTCTAAGTTTTTTCTTTTATTTTGTTTTCCAGCAAATAAGAGATTGGTCTATGAGGAGGTCAAGAAGGCTGTTGAGAGAGATCGATCAACAGTTAAGGTGTCTGAATTGTCCAGACATGGGCTTATGGAGATTACCAGGAAAAGAGTATGTTATTTGGTGCTGAATTTCTGTCATAACTACACTAGTGGAAATATCTAATTAATCATGGTTGGTCGTTTCATCTTATACCTGACAGGTTCGACCTAGTGTGACATTCATGATCAGTGAACCATGTATGTGCTGCCATGGTACGGGGAGAGTGGAAGCTTTAGCGACTGCATACTCTAAGATTGAACGTGAAATTTGCCGGTTGCTAGTAAGTAAACTAACGGCATCTTGAGATGCCTTTGCAAGGTTATCTTCTTGGATTCCTTACTATCTGTTAAGCTGCAAAAAGGTTGATCCAAAATCTTGTCTTTGGCAAGCTAATCCATTCTTACCACTTGGTCTCCATTTTTCCTCCTCTTCTTTTGGATCTTTCTGAATATAGTTCAACATGATTTGACATAATGACCGCTTTCCCCAAAACTGATTGTTGTTTCTTGTGTTGATCAGTCCACAACGGATCTGAAGGCAGACCCTGAAAACCCCAAGTCTTGGCCCAGATTTATTCTCAGGGTAGATCAGTACATGTCTAACTATTTAACTTCAGGAAAGAGGACAAGGCTAGCAATCTTGAGTAGTTCTCTCAAAGTTTGGCTTCTTCTAAAGGTATGCTTAGTCATTTTATCCATTCTCATAACAAAATATCACTTTTATTTCTGTATTTGCTGATTTTGTAAGCTGTGATTAACCAGGTTGCTAGAGGTTTTACCAAAGGGACCTTTGAGCTAAAACCTTTAACAGGCGACAAGGAGTACAAGGGTGATGAACGTGAAACATCTATTTCAGTGTTGCGACCAACAGAGGGTGGATTTCACCCCCCTCGGAAAAAAGTCACCATCTTCCCCATCAAAAAGTGGAGTAGTGGAAAGTGATGTTACCTCCATTAAGAATCATCTGTACAGGTCTCAAAAAACAATGCAAATCCACATATGGTTAGCATAAATTTATTAGCCAATTCTTTCTTCCCTCTTGAGTTTTTCTCGTCGGCTTGTAAGAAATAGCTAGTTTTATGAGGAAATCAATTTTGCATAGCATGTACGCATTGATAATACATATTTTCCATTTCTTATCTGCCCTTGCCTTTGTAAACCATAACATAAGATTCATTTATCTCATAATCATGAGCTTTTGCCACACTAATTGTAATTTAGCATGATGCTGAAAATAGTTTTGTGTCTCGTCTTTCATTTCCACTCTTCCTTTCCAAACATAAAGGTCCATAGAGATGGAAAATGAAAAAGCAAAAGTGAACCTCTTCATTCAAGTTCAAAGACGATCCTTTACTTCCGAGCCTCAACCTCACTTGGTAGACTGTCTTAGGAAAAATAATGCATACATTAGCTTTATGTATTATTAGTTTGAGCTTTTAAAAATTGAAAATAATAATTAAATTTCATAAGTTAAAATACGGAAAAGAGTCAAAATTGCCCTTGAACTATGTGAAATAGATTACTTGTACCCTCCGTTACATTTTGGGATCAAAAATACCCCCGCTGTTATCCTAAGAGACCACAAATACCCTCAAAGAGTTTAACACCTCAATTTTTTTAGTGATGTGGCATGCCACATAGGACTTATCCTTCACCTAAGCGTTGTCAACTAGGATTCATTACAAAAGAACTAGACCTTTAGGGCGACAATAGTCGCCACAAAATCCCAAAAAATCGTTACTAAAAGTTTTTAACATCAAATTTTAATTTTGTGTTTTTTTCTTCATTATTTTTTAAAAAAACAAAAA</genome_strand>
        <mrna_strand>GAAAGTGGTGATGCTTGTGATATTTTAGAAGTCCTTGCAGAAAATTGTAATGGTAGTGTAACTGAGCATGGGCTTGAAACTCATTCAGAGAAATATCCAGAAGAATCCAGTGGAATTGGGTACCGAGGGCAGAATCCAACTATTGAGCGTGCTATGAATGGTAAGAGAATTTCACAAAGAGATGAAAGCAAGTGGGTCCAGGTCCGAAAAGGCACTAAAATAATTGTGCAAGTTGTTAAAGAAGGATTGGGTACGAAGGGCCCAACACTGACTGCTTATCCGAAATTAAGGAGCAGATTCTGG...........................................................................................GTTTTAGTTCCTCGCGGCAACACGATAGGTATTTCAAAGAAGATTGCTGGTGTTGAGCGCACACGTTTAAGGGTCATTGCAAAAACTTTACAGCCTCAAGGATATGGTCTTACAGTAAGGACAGTTGCAGCTGGTCATTCACTAAATGAATTGCAGAAGGACTTGGAAGGGTTGCTTTCAACTTGGAAAAGTATAATTGAGCATGCAAAGTCTGCAGCTCTTGCCGCAGATGAAGGTGTTGATGGAGCAGTTCCTGTCATGCTTCACCAGGCAATGGGCCAAACACTTTCTGTTGTTCAAGATTATTTTAGCGATAAG....................................................................................................................................GTGAATAGTTTGGTGGTTGATTCTCCAAGGACATATCATGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACAAACTATCTTCAAGAAATGGCACCTAATCTTTGTGAAAGAGTTGAGTTGCATGGTACAAGAACTCCCCTGTTTGATGAATACAACATTGAGGAAGAAATAAACAACATTCTCAGCAAAAG..................................................................................................................................GGTTCCCCTTGATAATGGAGGTTATTTAGTGATCGAACAGACAGAGGCTTTAGTCTCCATCGATGTAAATGGTGGACATTGTGTGCTTGGTCAAGGGACTTCACAAGAGATGGCTATTCTCAATGTTAACCTTGCAGCTGCTAGACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTAGGGAAATAAGGCTGAGAGACATTGGTGGCATTATTGTGGTGGATTTCATAGATATGTTGGATGATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATAAGAGATTGGTCTATGAGGAGGTCAAGAAGGCTGTTGAGAGAGATCGATCTACAGTTAAGGTGTCTGAATTGTCCAGACATGGGCTTATGGAGATTACCAGGAAAAGA...........................................................................................GTTCGACCTAGTGTGACATTCATGATCAGTGAACCATGTATGTGCTGCCATGGTACGGGGAGAGTGGAAGCTTTAGCGACTGCATACTCTAAGATTGAACGTGAAATTTGCCGGTTGCTA...............................................................................................................................................................................................................................................TCCACAACGGATCTGAAGGCAGACCCTGAAAACCCCAAGTCTTGGCCCAGATTTATTCTCAGGGTAGATCAGTACATGTCTAACTATTTAACTTCAGGAAAGAGGACAAGGCTAGCAATCTTGAGTAGTTCTCTCAAAGTTTGGCTTCTTCTAAAG......................................................................................GTTGCTAGAGGTTTTACCAAAGGGACCTTTGAGCTAAAACCTTTAACAGGCGACAAGGAGTACAAGGGTGATGAACGTGAAACATCTATTTCAGTGTTGCGACCAACAGAGGGTGGATTTCACCCCCCTCGGAAAAAAGTCACCATCTTCCCCATCAAAAAGTGGAGTAGTGGAAAGTGATGTTACCTCCATTAAGAATCATCTGTACAGGTCTCAAAAAACAATGCAAATCCACATATGGTTAGCATAAATTTATTAGCCAATTCTTTCTTCCCTCTTGAGTTTTTCTCGTCGGCTTGTAAGAAATAGCTAGTTTTATGAGGAAATCAATTTTGCATAGCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>12</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="7482" PGL_stop="10353"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="7482" e_stop="7513"/>
            <exon e_start="7653" e_stop="7672"/>
            <exon e_start="8613" e_stop="8723"/>
            <exon e_start="8812" e_stop="8911"/>
            <exon e_start="9228" e_stop="9377"/>
            <exon e_start="10157" e_stop="10229"/>
            <exon e_start="10310" e_stop="10353"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="0.969"/>
          <exon-intron don_prob="0.994" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.962" acc_prob="0.531" e_score="1.000"/>
          <exon-intron don_prob="0.875" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.985" e_score="0.993"/>
          <exon-intron don_prob="0.999" acc_prob="0.981" e_score="1.000"/>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.969">
            <gDNA_exon_boundary e_start="7482" e_stop="7513" e_length="32"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="7653" e_stop="7672" e_length="20"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.935">
            <gDNA_intron_boundary i_start="7673" i_stop="8612" i_length="940"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="8613" e_stop="8723" e_length="111"/>
          </exon>
          <intron i_serial="3" don_prob="0.962" acc_prob="0.531">
            <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="8812" e_stop="8911" e_length="100"/>
          </exon>
          <intron i_serial="4" don_prob="0.875" acc_prob="0.997">
            <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316"/>
          </intron>
          <exon e_serial="5" e_score="0.993">
            <gDNA_exon_boundary e_start="9228" e_stop="9377" e_length="150"/>
          </exon>
          <intron i_serial="5" don_prob="0.985" acc_prob="0.985">
            <gDNA_intron_boundary i_start="9378" i_stop="10156" i_length="779"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="10157" e_stop="10229" e_length="73"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.981">
            <gDNA_intron_boundary i_start="10230" i_stop="10309" i_length="80"/>
          </intron>
          <exon e_serial="7" e_score="0.977">
            <gDNA_exon_boundary e_start="10310" e_stop="10353" e_length="44"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7482" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10353"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M1664" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCAATTTAGGGTTCGCTCCATCATCCGAAATG : GCTGATTCTCCACGCAAAAG : GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG : GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG : GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAG : TCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATG : GTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTAT</gDNA_template>
            <first_frame> A  I  *  G  S  L  H  H  P  K  W :   L  I  L  H  A  K   : G  I  P  A  L  L  H  L  G  K  K  S  Q  D  L  A  L  D  P  Q  L  D  H  S  Q  G  Q  E  E  D  Q  G  P  E  V  M  E   : G  L  K  I  L  I  L  E  T  H  S  M  *  L  D  Y  L  Q  G  S  L  K  G  I  L  K  S  I  S  Q  R  R  E  R :   *  S  Q  L  F  W  L  W  S  P  V  L  A  S  L  V  V  L  L  S  *  Q  W  I  V  L  R  M  P  I  A  A  L  S  T  L  I  S  P  S  L  K  A  G  P  *  R  W  R  S :   L  V  E  N  G  Q  G  L  Q  H  L  V  I  I  L  G  F  I  R  A  Q  G  V  M  :  V  I  M  V  I  G  V  G  I  V  A  V  V  T   </first_frame>
            <second_frame>  Q  F  R  V  R  S  I  I  R  N   : G  *  F  S  T  Q  K  :  V  F  P  L  S  F  T  L  G  R  K  V  K  I  S  L  S  I  P  N  *  I  T  V  K  A  K  R  K  I  K  V  Q  K  S  W  K  :  G  *  R  Y  *  S  W  K  H  T  L  C  D  W  I  I  F  K  G  H  S  K  G  S  *  R  A  F  L  K  G  G  K   : G  E  V  S  F  S  G  C  G  A  P  F  S  H  L  S  W  F  C  F  H  N  N  G  *  S  *  G  C  Q  S  L  H  *  A  P  *  S  V  R  P  *  R  P  V  H  N  G  G  E   : V  S  *  K  T  A  K  D  S  N  T  W  S  L  S  W  A  S  S  E  R  K  G  *  W :   L  S  W  *  S  G  *  V  S  W  P  W  *  L  </second_frame>
            <third_frame>   N  L  G  F  A  P  S  S  E  M  :  A  D  S  P  R  K  R :   Y  S  R  S  P  S  P  W  E  E  K  S  R  S  R  S  R  S  P  T  R  S  Q  S  R  P  R  G  R  S  R  S  R  S  H  G  R :   A  E  D  T  N  P  G  N  T  L  Y  V  T  G  L  S  S  R  V  T  Q  R  D  L  E  E  H  F  S  K  E  G  K  :  V  K  S  A  F  L  V  V  E  P  R  S  R  I  S  R  G  F  A  F  I  T  M  D  S  L  E  D  A  N  R  C  I  K  H  L  N  Q  S  V  L  E  G  R  S  I  T  V  E  K  :  S  R  R  K  R  P  R  T  P  T  P  G  H  Y  L  G  L  H  Q  S  A  R  G  D   : G  Y  H  G  D  R  G  R  Y  R  G  R  G  D  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7484" stop="7513"/>
                    <exon start="7653" stop="7672"/>
                    <exon start="8613" stop="8723"/>
                    <exon start="8812" stop="8911"/>
                    <exon start="9228" stop="9377"/>
                    <exon start="10157" stop="10229"/>
                    <exon start="10310" stop="10353"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>528</number_coding_nucleotides>
                  <number_encoded_amino_acids>176</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLGFAPSSEMADSPRKRYSRSPSPWEEKSRSRSRSPTRSQSRPRGRSRSRSHGRAEDTNPGNTLYVTGLSSRVTQRDLEEHFSKEGKVKSAFLVVEPRSRISRGFAFITMDSLEDANRCIKHLNQSVLEGRSITVEKSRRKRPRTPTPGHYLGLHQSARGDGYHGDRGRYRGRGDY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="12505" PGL_stop="16464"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="12505" e_stop="12864"/>
            <exon e_start="13985" e_stop="14197"/>
            <exon e_start="14293" e_stop="14345"/>
            <exon e_start="14444" e_stop="14500"/>
            <exon e_start="15016" e_stop="15081"/>
            <exon e_start="15175" e_stop="15246"/>
            <exon e_start="15650" e_stop="15759"/>
            <exon e_start="15834" e_stop="15925"/>
            <exon e_start="16028" e_stop="16094"/>
            <exon e_start="16284" e_stop="16464"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.433" acc_prob="0.970" e_score="1.000"/>
          <exon-intron don_prob="0.796" acc_prob="0.519" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.954" acc_prob="0.998" e_score="0.944"/>
          <exon-intron don_prob="0.985" acc_prob="0.753" e_score="0.982"/>
          <exon-intron don_prob="0.976" acc_prob="0.997" e_score="0.978"/>
          <exon-intron don_prob="0.998" acc_prob="0.981" e_score="0.955"/>
          <exon-only e_score="0.823"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="12505" e_stop="12864" e_length="360"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.000">
            <gDNA_intron_boundary i_start="12865" i_stop="13984" i_length="1120"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="13985" e_stop="14197" e_length="213"/>
          </exon>
          <intron i_serial="2" don_prob="0.433" acc_prob="0.970">
            <gDNA_intron_boundary i_start="14198" i_stop="14292" i_length="95"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="14293" e_stop="14345" e_length="53"/>
          </exon>
          <intron i_serial="3" don_prob="0.796" acc_prob="0.519">
            <gDNA_intron_boundary i_start="14346" i_stop="14443" i_length="98"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="14444" e_stop="14500" e_length="57"/>
          </exon>
          <intron i_serial="4" don_prob="0.983" acc_prob="0.969">
            <gDNA_intron_boundary i_start="14501" i_stop="15015" i_length="515"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="15016" e_stop="15081" e_length="66"/>
          </exon>
          <intron i_serial="5" don_prob="0.993" acc_prob="0.997">
            <gDNA_intron_boundary i_start="15082" i_stop="15174" i_length="93"/>
          </intron>
          <exon e_serial="6" e_score="0.944">
            <gDNA_exon_boundary e_start="15175" e_stop="15246" e_length="72"/>
          </exon>
          <intron i_serial="6" don_prob="0.954" acc_prob="0.998">
            <gDNA_intron_boundary i_start="15247" i_stop="15649" i_length="403"/>
          </intron>
          <exon e_serial="7" e_score="0.982">
            <gDNA_exon_boundary e_start="15650" e_stop="15759" e_length="110"/>
          </exon>
          <intron i_serial="7" don_prob="0.985" acc_prob="0.753">
            <gDNA_intron_boundary i_start="15760" i_stop="15833" i_length="74"/>
          </intron>
          <exon e_serial="8" e_score="0.978">
            <gDNA_exon_boundary e_start="15834" e_stop="15925" e_length="92"/>
          </exon>
          <intron i_serial="8" don_prob="0.976" acc_prob="0.997">
            <gDNA_intron_boundary i_start="15926" i_stop="16027" i_length="102"/>
          </intron>
          <exon e_serial="9" e_score="0.955">
            <gDNA_exon_boundary e_start="16028" e_stop="16094" e_length="67"/>
          </exon>
          <intron i_serial="9" don_prob="0.998" acc_prob="0.981">
            <gDNA_intron_boundary i_start="16095" i_stop="16283" i_length="189"/>
          </intron>
          <exon e_serial="10" e_score="0.823">
            <gDNA_exon_boundary e_start="16284" e_stop="16464" e_length="181"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12505" stop="12864"/>
              <exon start="13985" stop="14197"/>
              <exon start="14293" stop="14345"/>
              <exon start="14444" stop="14500"/>
              <exon start="15016" stop="15081"/>
              <exon start="15175" stop="15185"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M9217" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14133" stop="14197"/>
              <exon start="14293" stop="14345"/>
              <exon start="14444" stop="14500"/>
              <exon start="15016" stop="15081"/>
              <exon start="15175" stop="15246"/>
              <exon start="15650" stop="15759"/>
              <exon start="15834" stop="15925"/>
              <exon start="16028" stop="16094"/>
              <exon start="16284" stop="16464"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M9217-2" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TATTTTTGTCTTCTCCACCTAATTTATTTTATCCCTAAATCCCCCCCTTTTTTTTTCCTCCTCTCTCTGTAAACCCACATTGAATTTATTGTCTAACAATGCTCGGCGTTGAGTTAAGGATCTCCACCGTCGCCGGAGTTTTCACCGATCTACCGGAAACAAGTCGCCGGAGTGCCAGCTGGAACTGTAACTCCTCCATTGGAAATATCTCATATCATCTCTCTTCCAGAAATAGGCATTGTAGAAAGTCCAGATTCATGGTAATCTGTAGCAAGTCATCACGCGGAAGCTTTAATCGGAAATCTAATCAGAGTGATGAACCGGGTGATGATTATATTGAAGCTGTCGTTCTCGTTTCAG : AGACTATGAAGCACTACAAAATGCATATGGGTGGATTTCAAGAAGAAACAAGATGGCACTCATCTGCTCAGCTGATTCCCTCTTCTTTTCATCCTAAGGATCGTATTGCTAATGCATCATCTTTAGGGACAGGATTTCTTCGCCGTTTCAAGAATCCAACTATTTTTCTTAAGATTTCCTGTGATGCAGAATATGTCTTACCAATTATTGTTG : GAGAACATGCTGTCGAAAAACTTATAGATTCATTGCATGAGGAGGAGACTGGG : GATTGCCCCGACGAGTTCCTGCTTTTGAGGAATCTATTGTTGAAATCTGGCTATGAA : GTTAAAATGGTGAAGATTACAGAAAGAGTGACTAGTACTTATTTTGCCAGAATATTTTTCCACAAG : GCAGGGGAAAAAGATATTATTAGTGTGGATGCTCGTCCCTCCGATGCCATTAATGTTGCCAGAAGATGTAAG : GCACCAATATTTGTGAATAAGCAAATTGTCTTGACTGATGCAACTAGAATAGGTTATGGAATGGACCGATCTAGCAGAATTAAGTCCACCTATGATGTATTACTAGATAG : TGCATCAGATGGCCCCGATTTACTTTCTGAAGAACTTAGTATGTTGAGAAATATGAACTTAGCAGTGAATGAGGAGAGGTACAATGATGCAG : CTGTGTGGAAGGACAAACTGATGAGACTTCGTGAGTTCAAGACATGAGCTCTAAAATCTTTCTCCAG : AAATAAAATGTAAATATTCCTTCTGGATTGATGGCAGCTATGACACCGCGCTATATTTCAACTTTTCAGTATCACATTAACAAAAGTTTGGAGGAATCAATAATCTTCAGGGAAGTTCAAGTATTATTATTGTGTACATGTTCCCCTTGCTGTAGAAATCTCGAAAAGTAAATGCCTTACC</gDNA_template>
            <first_frame> Y  F  C  L  L  H  L  I  Y  F  I  P  K  S  P  P  F  F  F  L  L  S  L  *  T  H  I  E  F  I  V  *  Q  C  S  A  L  S  *  G  S  P  P  S  P  E  F  S  P  I  Y  R  K  Q  V  A  G  V  P  A  G  T  V  T  P  P  L  E  I  S  H  I  I  S  L  P  E  I  G  I  V  E  S  P  D  S  W  *  S  V  A  S  H  H  A  E  A  L  I  G  N  L  I  R  V  M  N  R  V  M  I  I  L  K  L  S  F  S  F  Q  :  R  L  *  S  T  T  K  C  I  W  V  D  F  K  K  K  Q  D  G  T  H  L  L  S  *  F  P  L  L  F  I  L  R  I  V  L  L  M  H  H  L  *  G  Q  D  F  F  A  V  S  R  I  Q  L  F  F  L  R  F  P  V  M  Q  N  M  S  Y  Q  L  L  L  :  E  N  M  L  S  K  N  L  *  I  H  C  M  R  R  R  L  G :   I  A  P  T  S  S  C  F  *  G  I  Y  C  *  N  L  A  M  K :   L  K  W  *  R  L  Q  K  E  *  L  V  L  I  L  P  E  Y  F  S  T  R :   Q  G  K  K  I  L  L  V  W  M  L  V  P  P  M  P  L  M  L  P  E  D  V  R :   H  Q  Y  L  *  I  S  K  L  S  *  L  M  Q  L  E  *  V  M  E  W  T  D  L  A  E  L  S  P  P  M  M  Y  Y  *  I   : V  H  Q  M  A  P  I  Y  F  L  K  N  L  V  C  *  E  I  *  T  *  Q  *  M  R  R  G  T  M  M  Q  :  L  C  G  R  T  N  *  *  D  F  V  S  S  R  H  E  L  *  N  L  S  P   : E  I  K  C  K  Y  S  F  W  I  D  G  S  Y  D  T  A  L  Y  F  N  F  S  V  S  H  *  Q  K  F  G  G  I  N  N  L  Q  G  S  S  S  I  I  I  V  Y  M  F  P  L  L  *  K  S  R  K  V  N  A  L   </first_frame>
            <second_frame>  I  F  V  F  S  T  *  F  I  L  S  L  N  P  P  L  F  F  S  S  S  L  C  K  P  T  L  N  L  L  S  N  N  A  R  R  *  V  K  D  L  H  R  R  R  S  F  H  R  S  T  G  N  K  S  P  E  C  Q  L  E  L  *  L  L  H  W  K  Y  L  I  S  S  L  F  Q  K  *  A  L  *  K  V  Q  I  H  G  N  L  *  Q  V  I  T  R  K  L  *  S  E  I  *  S  E  *  *  T  G  *  *  L  Y  *  S  C  R  S  R  F  R :   D  Y  E  A  L  Q  N  A  Y  G  W  I  S  R  R  N  K  M  A  L  I  C  S  A  D  S  L  F  F  S  S  *  G  S  Y  C  *  C  I  I  F  R  D  R  I  S  S  P  F  Q  E  S  N  Y  F  S  *  D  F  L  *  C  R  I  C  L  T  N  Y  C  W :   R  T  C  C  R  K  T  Y  R  F  I  A  *  G  G  D  W   : G  L  P  R  R  V  P  A  F  E  E  S  I  V  E  I  W  L  *   : S  *  N  G  E  D  Y  R  K  S  D  *  Y  L  F  C  Q  N  I  F  P  Q   : G  R  G  K  R  Y  Y  *  C  G  C  S  S  L  R  C  H  *  C  C  Q  K  M  *   : G  T  N  I  C  E  *  A  N  C  L  D  *  C  N  *  N  R  L  W  N  G  P  I  *  Q  N  *  V  H  L  *  C  I  T  R  *  :  C  I  R  W  P  R  F  T  F  *  R  T  *  Y  V  E  K  Y  E  L  S  S  E  *  G  E  V  Q  *  C  S :   C  V  E  G  Q  T  D  E  T  S  *  V  Q  D  M  S  S  K  I  F  L  Q  :  K  *  N  V  N  I  P  S  G  L  M  A  A  M  T  P  R  Y  I  S  T  F  Q  Y  H  I  N  K  S  L  E  E  S  I  I  F  R  E  V  Q  V  L  L  L  C  T  C  S  P  C  C  R  N  L  E  K  *  M  P  Y  </second_frame>
            <third_frame>   F  L  S  S  P  P  N  L  F  Y  P  *  I  P  P  F  F  F  P  P  L  S  V  N  P  H  *  I  Y  C  L  T  M  L  G  V  E  L  R  I  S  T  V  A  G  V  F  T  D  L  P  E  T  S  R  R  S  A  S  W  N  C  N  S  S  I  G  N  I  S  Y  H  L  S  S  R  N  R  H  C  R  K  S  R  F  M  V  I  C  S  K  S  S  R  G  S  F  N  R  K  S  N  Q  S  D  E  P  G  D  D  Y  I  E  A  V  V  L  V  S   : E  T  M  K  H  Y  K  M  H  M  G  G  F  Q  E  E  T  R  W  H  S  S  A  Q  L  I  P  S  S  F  H  P  K  D  R  I  A  N  A  S  S  L  G  T  G  F  L  R  R  F  K  N  P  T  I  F  L  K  I  S  C  D  A  E  Y  V  L  P  I  I  V   : G  E  H  A  V  E  K  L  I  D  S  L  H  E  E  E  T  G  :  D  C  P  D  E  F  L  L  L  R  N  L  L  L  K  S  G  Y  E  :  V  K  M  V  K  I  T  E  R  V  T  S  T  Y  F  A  R  I  F  F  H  K  :  A  G  E  K  D  I  I  S  V  D  A  R  P  S  D  A  I  N  V  A  R  R  C  K  :  A  P  I  F  V  N  K  Q  I  V  L  T  D  A  T  R  I  G  Y  G  M  D  R  S  S  R  I  K  S  T  Y  D  V  L  L  D  S :   A  S  D  G  P  D  L  L  S  E  E  L  S  M  L  R  N  M  N  L  A  V  N  E  E  R  Y  N  D  A   : A  V  W  K  D  K  L  M  R  L  R  E  F  K  T  *  A  L  K  S  F  S  R :   N  K  M  *  I  F  L  L  D  *  W  Q  L  *  H  R  A  I  F  Q  L  F  S  I  T  L  T  K  V  W  R  N  Q  *  S  S  G  K  F  K  Y  Y  Y  C  V  H  V  P  L  A  V  E  I  S  K  S  K  C  L  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12588" stop="12864"/>
                    <exon start="13985" stop="14197"/>
                    <exon start="14293" stop="14345"/>
                    <exon start="14444" stop="14500"/>
                    <exon start="15016" stop="15081"/>
                    <exon start="15175" stop="15246"/>
                    <exon start="15650" stop="15759"/>
                    <exon start="15834" stop="15925"/>
                    <exon start="16028" stop="16074"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>984</number_coding_nucleotides>
                  <number_encoded_amino_acids>328</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IYCLTMLGVELRISTVAGVFTDLPETSRRSASWNCNSSIGNISYHLSSRNRHCRKSRFMVICSKSSRGSFNRKSNQSDEPGDDYIEAVVLVSETMKHYKMHMGGFQEETRWHSSAQLIPSSFHPKDRIANASSLGTGFLRRFKNPTIFLKISCDAEYVLPIIVGEHAVEKLIDSLHEEETGDCPDEFLLLRNLLLKSGYEVKMVKITERVTSTYFARIFFHKAGEKDIISVDARPSDAINVARRCKAPIFVNKQIVLTDATRIGYGMDRSSRIKSTYDVLLDSASDGPDLLSEELSMLRNMNLAVNEERYNDAAVWKDKLMRLREFKT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="52479" PGL_stop="49833"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52479" e_stop="52308"/>
            <exon e_start="52203" e_stop="52102"/>
            <exon e_start="52015" e_stop="51905"/>
            <exon e_start="51765" e_stop="51692"/>
            <exon e_start="50577" e_stop="50507"/>
            <exon e_start="50399" e_stop="50346"/>
            <exon e_start="50168" e_stop="49833"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.429" e_score="1.000"/>
          <exon-intron don_prob="0.764" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.927" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="52479" e_stop="52308" e_length="172"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.429">
            <gDNA_intron_boundary i_start="52307" i_stop="52204" i_length="104"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="52203" e_stop="52102" e_length="102"/>
          </exon>
          <intron i_serial="2" don_prob="0.764" acc_prob="0.993">
            <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="52015" e_stop="51905" e_length="111"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="51765" e_stop="51692" e_length="74"/>
          </exon>
          <intron i_serial="4" don_prob="0.992" acc_prob="0.991">
            <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="50577" e_stop="50507" e_length="71"/>
          </exon>
          <intron i_serial="5" don_prob="0.972" acc_prob="0.997">
            <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="50399" e_stop="50346" e_length="54"/>
          </exon>
          <intron i_serial="6" don_prob="0.927" acc_prob="1.000">
            <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="50168" e_stop="49833" e_length="336"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52479" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49833"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M8483" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAAAACCCTCCTGTCTTCACCCATAAATATCAATCTCCCTTTCATTTCTCACCATCAAACAAAATAATTGAACAACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG : CAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG : CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG : AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG : GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT : GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT : GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAGGCCTCTCATCTGCTC</gDNA_template>
            <first_frame> K  K  T  L  L  S  S  P  I  N  I  N  L  P  F  I  S  H  H  Q  T  K  *  L  N  N  F  H  R  N  K  Q  S  *  E  L  F  P  F  I  Q  P  H  F  H  L  L  S  S  M  V  P  R  I  W  H  K   : A  G  S  I  D  R  F  R  *  F  Q  W  R  G  L  N  F  S  L  K  *  D  V  T  L  V  L  A  I  E  I  Q  V  L   : A  G  W  Q  Q  L  E  R  K  C  T  T  P  R  F  L  L  L  F  L  F  E  L  H  L  N  C  F  K  L  A  I  V  I  *  M  S   : E  L  L  R  S  T  M  M  G  M  L  L  E  P  *  T  F  L  T  C  L  E  L  A  Q  :  G  *  *  R  T  P  I  S  W  R  K  C  W  N  N  S  G  R  M  M  R  L  *  L :   D  A  S  W  V  R  D  H  L  W  L  Q  L  N  F  L  L  L :   D  L  L  G  *  L  T  L  L  V  D  M  L  R  G  Q  R  V  D  F  R  L  S  L  E  G  L  L  F  T  H  I  *  K  G  *  I  F  K  *  V  H  T  S  S  Q  H  G  E  I  N  S  L  S  S  H  Q  K  L  E  G  A  T  C  K  I  S  C  T  V  I  Y  S  R  *  *  *  Y  S  M  W  E  N  L  Y  C  K  K  Y  V  *  I  L  F  S  *  F  C  Y  N  K  *  Y  L  P  E  R  P  L  I  C   </first_frame>
            <second_frame>  K  K  P  S  C  L  H  P  *  I  S  I  S  L  S  F  L  T  I  K  Q  N  N  *  T  T  S  T  G  T  N  N  H  E  N  Y  F  P  S  F  N  L  I  F  T  C  *  V  P  W  Y  Q  E  F  G  T  K  :  Q  D  Q  *  I  G  F  V  D  S  N  G  E  V  S  I  S  A  *  N  K  T  *  H  W  Y  *  Q  *  K  S  K  F  *  :  L  D  G  N  S  W  R  E  S  A  Q  L  H  G  S  Y  F  C  S  C  S  S  C  T  *  I  A  S  S  W  P  S  L  F  R  C  Q  :  N  Y  *  G  V  Q  *  W  A  C  C  W  S  H  K  H  S  L  H  A  *  N  W  L  R :   D  D  K  E  P  Q  F  L  G  G  S  V  G  T  I  R  E  G  *  *  D  Y  S   : W  M  P  V  G  *  E  I  I  Y  G  C  N  *  T  S  C  C   : W  I  Y  W  G  D  *  H  C  W  W  I  C  C  V  D  R  E  W  T  S  D  *  V  L  K  A  F  Y  L  L  T  Y  K  K  G  R  F  L  N  K  Y  T  P  V  V  N  M  A  K  S  I  P  F  L  H  I  K  N  *  K  E  Q  L  A  K  S  L  V  Q  *  F  I  A  G  D  D  D  I  R  C  G  R  I  C  I  A  R  N  M  C  K  Y  C  S  P  N  S  A  I  I  N  N  I  C  L  K  G  L  S  S  A  </second_frame>
            <third_frame>   K  N  P  P  V  F  T  H  K  Y  Q  S  P  F  H  F  S  P  S  N  K  I  I  E  Q  L  P  Q  E  Q  T  I  M  R  T  I  S  L  H  S  T  S  F  S  L  V  E  F  H  G  T  K  N  L  A  Q  S :   R  I  N  R  S  V  S  L  I  P  M  A  R  S  Q  F  Q  P  K  I  R  R  D  I  G  T  S  N  R  N  P  S  F  S :   W  M  A  T  V  G  E  K  V  H  N  S  T  V  P  T  S  V  P  V  R  V  A  L  E  L  L  Q  A  G  H  R  Y  L  D  V  R :   T  T  E  E  Y  N  D  G  H  A  A  G  A  I  N  I  P  Y  M  L  R  I  G  S   : G  M  I  K  N  P  N  F  L  E  E  V  L  E  Q  F  G  K  D  D  E  I  I  V  :  G  C  Q  L  G  K  R  S  F  M  A  A  T  E  L  L  A  A  :  G  F  T  G  V  T  D  I  A  G  G  Y  A  A  W  T  E  S  G  L  P  I  E  S  *  R  P  F  I  Y  S  H  I  K  R  V  D  F  *  I  S  T  H  Q  *  S  T  W  R  N  Q  F  P  F  F  T  S  K  I  R  R  S  N  L  Q  N  L  L  Y  S  N  L  *  Q  V  M  M  I  F  D  V  G  E  S  V  L  Q  E  I  C  V  N  I  V  L  L  I  L  L  *  *  I  I  F  A  *  K  A  S  H  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52477" stop="52308"/>
                    <exon start="52203" stop="52102"/>
                    <exon start="52015" stop="51905"/>
                    <exon start="51765" stop="51692"/>
                    <exon start="50577" stop="50507"/>
                    <exon start="50399" stop="50346"/>
                    <exon start="50168" stop="50094"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>654</number_coding_nucleotides>
                  <number_encoded_amino_acids>218</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KNPPVFTHKYQSPFHFSPSNKIIEQLPQEQTIMRTISLHSTSFSLVEFHGTKNLAQSRINRSVSLIPMARSQFQPKIRRDIGTSNRNPSFSWMATVGEKVHNSTVPTSVPVRVALELLQAGHRYLDVRTTEEYNDGHAAGAINIPYMLRIGSGMIKNPNFLEEVLEQFGKDDEIIVGCQLGKRSFMAATELLAAGFTGVTDIAGGYAAWTESGLPIES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="61408" PGL_stop="62767"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61408" e_stop="61549"/>
            <exon e_start="62251" e_stop="62388"/>
            <exon e_start="62519" e_stop="62767"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.989" acc_prob="0.720" e_score="0.993"/>
          <exon-intron don_prob="0.988" acc_prob="0.874" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="61408" e_stop="61549" e_length="142"/>
          </exon>
          <intron i_serial="1" don_prob="0.989" acc_prob="0.720">
            <gDNA_intron_boundary i_start="61550" i_stop="62250" i_length="701"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="62251" e_stop="62388" e_length="138"/>
          </exon>
          <intron i_serial="2" don_prob="0.988" acc_prob="0.874">
            <gDNA_intron_boundary i_start="62389" i_stop="62518" i_length="130"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="62519" e_stop="62767" e_length="249"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61408" stop="61549"/>
              <exon start="62251" stop="62388"/>
              <exon start="62519" stop="62767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M1578" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTGGCTGAGATGGAATACTTTACAGCAGAGATCACATCAGAGTCTACACCTTTTGCTATATCCCTAGCGAAACACCTGCATTCAATTGGGGCAAAAATGTATGGGGCTTTCTGGTGTTCTCACTGCCAGGAACAAAAGCAG : ATGTTTGGACGAGAAGCAGCAAAGTTACTAGACTATGTAGAATGCTTTCCTTATGGACTTAAGAGGGGAATTTCTATGATCAATGCATGTCAAGAAGCAAAACTCGAAGGGTTCCCTACATGGGTTATCAATGGGGAG : GTTCTTAGCGGAGAGAAGAAGCTTTCAGAGCTGGCTGCACTGTCTGGTTTCGATATGAAAGAAGAACTTACTGAGGCTAAATGAGCTCTGTTGATCAACAGTCACATACTCTTAGGATATCTAAGTTTATGAATTCTTATAACTGCCCTCTGGTATTTACTTAGTTTCATAATGTAATTACCTTCTTATGTTAGTAAAACTGAATAGGTAGTATGATAAAGTGAAGGATCCGAGTGGATCATCTTCTGA</gDNA_template>
            <first_frame> S  G  *  D  G  I  L  Y  S  R  D  H  I  R  V  Y  T  F  C  Y  I  P  S  E  T  P  A  F  N  W  G  K  N  V  W  G  F  L  V  F  S  L  P  G  T  K  A   : D  V  W  T  R  S  S  K  V  T  R  L  C  R  M  L  S  L  W  T  *  E  G  N  F  Y  D  Q  C  M  S  R  S  K  T  R  R  V  P  Y  M  G  Y  Q  W  G   : G  S  *  R  R  E  E  A  F  R  A  G  C  T  V  W  F  R  Y  E  R  R  T  Y  *  G  *  M  S  S  V  D  Q  Q  S  H  T  L  R  I  S  K  F  M  N  S  Y  N  C  P  L  V  F  T  *  F  H  N  V  I  T  F  L  C  *  *  N  *  I  G  S  M  I  K  *  R  I  R  V  D  H  L  L  </first_frame>
            <second_frame>  L  A  E  M  E  Y  F  T  A  E  I  T  S  E  S  T  P  F  A  I  S  L  A  K  H  L  H  S  I  G  A  K  M  Y  G  A  F  W  C  S  H  C  Q  E  Q  K  Q  :  M  F  G  R  E  A  A  K  L  L  D  Y  V  E  C  F  P  Y  G  L  K  R  G  I  S  M  I  N  A  C  Q  E  A  K  L  E  G  F  P  T  W  V  I  N  G  E  :  V  L  S  G  E  K  K  L  S  E  L  A  A  L  S  G  F  D  M  K  E  E  L  T  E  A  K  *  A  L  L  I  N  S  H  I  L  L  G  Y  L  S  L  *  I  L  I  T  A  L  W  Y  L  L  S  F  I  M  *  L  P  S  Y  V  S  K  T  E  *  V  V  *  *  S  E  G  S  E  W  I  I  F  * </second_frame>
            <third_frame>   W  L  R  W  N  T  L  Q  Q  R  S  H  Q  S  L  H  L  L  L  Y  P  *  R  N  T  C  I  Q  L  G  Q  K  C  M  G  L  S  G  V  L  T  A  R  N  K  S  R :   C  L  D  E  K  Q  Q  S  Y  *  T  M  *  N  A  F  L  M  D  L  R  G  E  F  L  *  S  M  H  V  K  K  Q  N  S  K  G  S  L  H  G  L  S  M  G  R :   F  L  A  E  R  R  S  F  Q  S  W  L  H  C  L  V  S  I  *  K  K  N  L  L  R  L  N  E  L  C  *  S  T  V  T  Y  S  *  D  I  *  V  Y  E  F  L  *  L  P  S  G  I  Y  L  V  S  *  C  N  Y  L  L  M  L  V  K  L  N  R  *  Y  D  K  V  K  D  P  S  G  S  S  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61409" stop="61549"/>
                    <exon start="62251" stop="62388"/>
                    <exon start="62519" stop="62602"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>360</number_coding_nucleotides>
                  <number_encoded_amino_acids>120</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LAEMEYFTAEITSESTPFAISLAKHLHSIGAKMYGAFWCSHCQEQKQMFGREAAKLLDYVECFPYGLKRGISMINACQEAKLEGFPTWVINGEVLSGEKKLSELAALSGFDMKEELTEAK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="65810" PGL_stop="66790"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65810" e_stop="66109"/>
            <exon e_start="66205" e_stop="66790"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.912" acc_prob="0.414" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="65810" e_stop="66109" e_length="300"/>
          </exon>
          <intron i_serial="1" don_prob="0.912" acc_prob="0.414">
            <gDNA_intron_boundary i_start="66110" i_stop="66204" i_length="95"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="66205" e_stop="66790" e_length="586"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65810" stop="66109"/>
              <exon start="66205" stop="66790"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M8794" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTGGGCTTATTTCTGGAGCTTTGTTCTTTCTCCTTACTGGGATTTTCTTCTTTTTATATGGCTGCGATTTCTTGCATGAAGCACTGCTCTATCATCTCACACGTACAGACCCTAGGCACAATTTCTCAATTTATTTCTACCATATATATCTGCACTATGAACATGAGTTATCTATCTTGGAAAAGCTCGTCTCGTTTCTGCCTCAGATTATGGTGCAGCTAGTTCTTGTTTTCCGCTTTGCACAAGATTTTCCATTTTGCTTCTTTGTGCAGACTGTGGCATTTGTCGCATTTAACAAG : GTTATGACTGCTCAATACTTTGTTTGGTTCTTCTGTCTCTTGCCACTAATCCTGCCATGGACCAACATGAAGCTCGGAGGAAAAGGACTGGTCTGCATCTTGTTGTGGATGGCAGCTCAGGGTCACTGGTTATTGTGGGGTTATTTGCTTGAATTTAAAGGAAAGAATGTCTTTCTTCAACTCTGGGTGGCAGGTTTGCTGTTCTTGGCTGCAAATACTTTCGTTCTTATCAATATTATTCAGCAACACACATATAGTCCCGTCTTCCAACAGTCATCTCGTGCCTCTTCAAAGAAACAAGTCAAACAGAGATGAGGAATCAGATCATATACCTCCTAATTCACTGGGGGAGGAATTTTCGAGCTAGTAGTGTATTTAGCCATATTCGGTACTTGTAGAGCCTTTCATCATCAGGCAAAGCACTTGGCTTATTCATAGCTCCATGCTTAAAAATACCTTCACTAAAGATGTAGCAAGAGATCGTTATTTTGAAGTTTTGGTCGTTTTGCTTTTAGAGCATACGGAATGATAGCAATTTACAATTTGTTTGTTGCATTTGGTATAAGTTTAATTCAGTTAACCTCTC</gDNA_template>
            <first_frame> F  G  L  I  S  G  A  L  F  F  L  L  T  G  I  F  F  F  L  Y  G  C  D  F  L  H  E  A  L  L  Y  H  L  T  R  T  D  P  R  H  N  F  S  I  Y  F  Y  H  I  Y  L  H  Y  E  H  E  L  S  I  L  E  K  L  V  S  F  L  P  Q  I  M  V  Q  L  V  L  V  F  R  F  A  Q  D  F  P  F  C  F  F  V  Q  T  V  A  F  V  A  F  N  K  :  V  M  T  A  Q  Y  F  V  W  F  F  C  L  L  P  L  I  L  P  W  T  N  M  K  L  G  G  K  G  L  V  C  I  L  L  W  M  A  A  Q  G  H  W  L  L  W  G  Y  L  L  E  F  K  G  K  N  V  F  L  Q  L  W  V  A  G  L  L  F  L  A  A  N  T  F  V  L  I  N  I  I  Q  Q  H  T  Y  S  P  V  F  Q  Q  S  S  R  A  S  S  K  K  Q  V  K  Q  R  *  G  I  R  S  Y  T  S  *  F  T  G  G  G  I  F  E  L  V  V  Y  L  A  I  F  G  T  C  R  A  F  H  H  Q  A  K  H  L  A  Y  S  *  L  H  A  *  K  Y  L  H  *  R  C  S  K  R  S  L  F  *  S  F  G  R  F  A  F  R  A  Y  G  M  I  A  I  Y  N  L  F  V  A  F  G  I  S  L  I  Q  L  T  S  </first_frame>
            <second_frame>  L  G  L  F  L  E  L  C  S  F  S  L  L  G  F  S  S  F  Y  M  A  A  I  S  C  M  K  H  C  S  I  I  S  H  V  Q  T  L  G  T  I  S  Q  F  I  S  T  I  Y  I  C  T  M  N  M  S  Y  L  S  W  K  S  S  S  R  F  C  L  R  L  W  C  S  *  F  L  F  S  A  L  H  K  I  F  H  F  A  S  L  C  R  L  W  H  L  S  H  L  T  R :   L  *  L  L  N  T  L  F  G  S  S  V  S  C  H  *  S  C  H  G  P  T  *  S  S  E  E  K  D  W  S  A  S  C  C  G  W  Q  L  R  V  T  G  Y  C  G  V  I  C  L  N  L  K  E  R  M  S  F  F  N  S  G  W  Q  V  C  C  S  W  L  Q  I  L  S  F  L  S  I  L  F  S  N  T  H  I  V  P  S  S  N  S  H  L  V  P  L  Q  R  N  K  S  N  R  D  E  E  S  D  H  I  P  P  N  S  L  G  E  E  F  S  S  *  *  C  I  *  P  Y  S  V  L  V  E  P  F  I  I  R  Q  S  T  W  L  I  H  S  S  M  L  K  N  T  F  T  K  D  V  A  R  D  R  Y  F  E  V  L  V  V  L  L  L  E  H  T  E  *  *  Q  F  T  I  C  L  L  H  L  V  *  V  *  F  S  *  P  L </second_frame>
            <third_frame>   W  A  Y  F  W  S  F  V  L  S  P  Y  W  D  F  L  L  F  I  W  L  R  F  L  A  *  S  T  A  L  S  S  H  T  Y  R  P  *  A  Q  F  L  N  L  F  L  P  Y  I  S  A  L  *  T  *  V  I  Y  L  G  K  A  R  L  V  S  A  S  D  Y  G  A  A  S  S  C  F  P  L  C  T  R  F  S  I  L  L  L  C  A  D  C  G  I  C  R  I  *  Q   : G  Y  D  C  S  I  L  C  L  V  L  L  S  L  A  T  N  P  A  M  D  Q  H  E  A  R  R  K  R  T  G  L  H  L  V  V  D  G  S  S  G  S  L  V  I  V  G  L  F  A  *  I  *  R  K  E  C  L  S  S  T  L  G  G  R  F  A  V  L  G  C  K  Y  F  R  S  Y  Q  Y  Y  S  A  T  H  I  *  S  R  L  P  T  V  I  S  C  L  F  K  E  T  S  Q  T  E  M  R  N  Q  I  I  Y  L  L  I  H  W  G  R  N  F  R  A  S  S  V  F  S  H  I  R  Y  L  *  S  L  S  S  S  G  K  A  L  G  L  F  I  A  P  C  L  K  I  P  S  L  K  M  *  Q  E  I  V  I  L  K  F  W  S  F  C  F  *  S  I  R  N  D  S  N  L  Q  F  V  C  C  I  W  Y  K  F  N  S  V  N  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65810" stop="66109"/>
                    <exon start="66205" stop="66519"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>612</number_coding_nucleotides>
                  <number_encoded_amino_acids>204</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FGLISGALFFLLTGIFFFLYGCDFLHEALLYHLTRTDPRHNFSIYFYHIYLHYEHELSILEKLVSFLPQIMVQLVLVFRFAQDFPFCFFVQTVAFVAFNKVMTAQYFVWFFCLLPLILPWTNMKLGGKGLVCILLWMAAQGHWLLWGYLLEFKGKNVFLQLWVAGLLFLAANTFVLINIIQQHTYSPVFQQSSRASSKKQVKQR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="72652" PGL_stop="73977"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72652" e_stop="72857"/>
            <exon e_start="72952" e_stop="73216"/>
            <exon e_start="73357" e_stop="73859"/>
            <exon e_start="73961" e_stop="73977"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.894" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.635" e_score="1.000"/>
          <exon-only e_score="0.471"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="72652" e_stop="72857" e_length="206"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.996">
            <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="72952" e_stop="73216" e_length="265"/>
          </exon>
          <intron i_serial="2" don_prob="0.992" acc_prob="0.894">
            <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="73357" e_stop="73859" e_length="503"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.635">
            <gDNA_intron_boundary i_start="73860" i_stop="73960" i_length="101"/>
          </intron>
          <exon e_serial="4" e_score="0.471">
            <gDNA_exon_boundary e_start="73961" e_stop="73977" e_length="17"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72652" stop="72857"/>
              <exon start="72952" stop="73216"/>
              <exon start="73357" stop="73859"/>
              <exon start="73961" stop="73977"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M8482" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72699" stop="72857"/>
              <exon start="72952" stop="73076"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M1586" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72724" stop="72857"/>
              <exon start="72952" stop="73216"/>
              <exon start="73357" stop="73728"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M8482-2" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTATATAAATCCTCTCCGCCCTTCTTTCTCATATCTCATCCCACAACAAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG : CTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG : GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTTTTTTCTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTTTTTTCTTCTTGTTGTTGTTATATAGTAATAGTACAAAGGTCATCAACTTTGAAAGCAATGATGATTTCCTATCTGAAAAATCCTGGAATGTTGTTATCTTTCTTCTGGAAGATGAATATATATACTTTTATGAGGA : TGAATAATGATTAGCAA</gDNA_template>
            <first_frame> L  Y  K  S  S  P  P  F  F  L  I  S  H  P  T  T  N  V  A  F  C  F  C  N  N  R  D  S  K  N  H  V  Y  R  S  *  T  T  T  A  Y  R  E  T  R  N  I  Q  D  P  R  Q  R  *  T  W  P  Q  N  F  A  H  H  R  K  I  L  S  C :   *  K  S  E  C  *  S  C  E  Q  V  F  S  G  E  D  L  S  G  T  *  E  K  A  V  R  R  G  V  C  S  H  R  C  G  E  K  R  E  F  P  R  S  I  S  F  T  I  V  L  R  C  D  S  G  E  S  P  R  E  S  G  G  Y  L  L  S  S  P  W  S  S  S  Q  A  L  P  C  H  I  W  S  L  H  L  Q  R  R  :  V  I  W  E  I  E  V  C  E  Q  G  *  *  S  V  G  A  C  E  E  E  *  D  W  D  A  R  I  C  V  R  S  *  *  R  S  *  V  P  S  D  D  G  L  W  P  G  E  *  S  C  Q  G  L  W  R  C  A  C  R  R  L  T  C  Y  N  V  L  H  E  M  H  L  I  R  *  L  E  A  F  C  S  L  F  G  S  *  L  D  V  *  E  P  H  G  F  L  F  S  S  S  I  *  C  N  F  F  A  L  Y  I  R  L  D  G  G  *  Q  L  A  S  T  F  F  F  L  L  L  L  Y  S  N  S  T  K  V  I  N  F  E  S  N  D  D  F  L  S  E  K  S  W  N  V  V  I  F  L  L  E  D  E  Y  I  Y  F  Y  E  D :   E  *  *  L  A  </first_frame>
            <second_frame>  Y  I  N  P  L  R  P  S  F  S  Y  L  I  P  Q  Q  T  *  R  F  A  F  A  T  I  E  I  Q  K  T  M  F  T  E  V  E  Q  Q  Q  H  I  E  K  L  E  I  F  K  I  Q  G  R  D  K  R  G  R  K  I  L  R  I  I  G  K  F  F  P   : A  R  N  L  S  V  E  V  V  N  K  Y  L  A  E  K  I  F  P  E  L  E  K  R  P  F  A  V  V  Y  V  H  T  D  V  E  K  S  E  N  F  P  G  V  S  A  L  R  S  F  Y  D  A  I  P  V  K  V  R  E  N  L  E  A  I  Y  F  L  H  P  G  L  Q  A  R  L  F  L  A  T  F  G  R  F  I  F  S  G  G :   L  Y  G  K  L  R  Y  V  S  R  V  D  N  L  W  E  H  V  R  R  N  E  I  G  M  P  E  F  V  Y  D  H  D  E  D  L  E  Y  R  P  M  M  D  Y  G  L  E  S  D  H  A  R  V  Y  G  D  A  P  A  V  D  S  P  V  T  M  Y  S  M  R  C  I  S  *  D  N  W  K  P  F  A  V  F  S  V  H  S  *  M  C  R  N  L  M  A  F  F  F  L  P  P  S  D  A  I  F  L  L  C  I  Y  D  *  M  E  V  S  N  *  Q  A  L  F  S  S  C  C  C  Y  I  V  I  V  Q  R  S  S  T  L  K  A  M  M  I  S  Y  L  K  N  P  G  M  L  L  S  F  F  W  K  M  N  I  Y  T  F  M  R   : M  N  N  D  *  Q </second_frame>
            <third_frame>   I  *  I  L  S  A  L  L  S  H  I  S  S  H  N  K  R  S  V  L  L  L  Q  Q  S  R  F  K  K  P  C  L  Q  K  L  N  N  N  S  I  *  R  N  S  K  Y  S  R  S  K  A  E  I  N  V  A  A  K  F  C  A  S  S  E  N  S  F  L  :  L  E  I  *  V  L  K  L  *  T  S  I  *  R  R  R  S  F  R  N  L  R  K  G  R  S  P  W  C  M  F  T  P  M  W  R  K  A  R  I  S  P  E  Y  Q  L  Y  D  R  S  T  M  R  F  R  *  K  S  E  R  I  W  R  L  F  T  F  F  T  L  V  F  K  P  G  S  S  L  P  H  L  V  A  S  S  S  A  E   : G  Y  M  G  N  *  G  M  *  A  G  L  I  I  C  G  S  M  *  G  G  M  R  L  G  C  Q  N  L  C  T  I  M  M  K  I  L  S  T  V  R  *  W  T  M  A  W  R  V  I  M  P  G  S  M  A  M  R  L  P  *  T  H  L  L  Q  C  T  P  *  D  A  S  H  K  I  I  G  S  L  L  Q  S  F  R  F  I  V  R  C  V  G  T  S  W  L  S  F  F  F  L  H  L  M  Q  F  F  C  S  V  Y  T  I  R  W  R  L  A  T  S  K  H  F  F  L  L  V  V  V  I  *  *  *  Y  K  G  H  Q  L  *  K  Q  *  *  F  P  I  *  K  I  L  E  C  C  Y  L  S  S  G  R  *  I  Y  I  L  L  *  G  :  *  I  M  I  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72707" stop="72857"/>
                    <exon start="72952" stop="73216"/>
                    <exon start="73357" stop="73579"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>636</number_coding_nucleotides>
                  <number_encoded_amino_acids>212</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RFAFATIEIQKTMFTEVEQQQHIEKLEIFKIQGRDKRGRKILRIIGKFFPARNLSVEVVNKYLAEKIFPELEKRPFAVVYVHTDVEKSENFPGVSALRSFYDAIPVKVRENLEAIYFLHPGLQARLFLATFGRFIFSGGLYGKLRYVSRVDNLWEHVRRNEIGMPEFVYDHDEDLEYRPMMDYGLESDHARVYGDAPAVDSPVTMYSMRCIS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="102242" PGL_stop="104010"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="102242" e_stop="102310"/>
            <exon e_start="102414" e_stop="102508"/>
            <exon e_start="102749" e_stop="102925"/>
            <exon e_start="103001" e_stop="103196"/>
            <exon e_start="103552" e_stop="104010"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.941" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.801" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.968" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="102242" e_stop="102310" e_length="69"/>
          </exon>
          <intron i_serial="1" don_prob="0.941" acc_prob="0.000">
            <gDNA_intron_boundary i_start="102311" i_stop="102413" i_length="103"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="102414" e_stop="102508" e_length="95"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.982">
            <gDNA_intron_boundary i_start="102509" i_stop="102748" i_length="240"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="102749" e_stop="102925" e_length="177"/>
          </exon>
          <intron i_serial="3" don_prob="0.801" acc_prob="0.992">
            <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="103001" e_stop="103196" e_length="196"/>
          </exon>
          <intron i_serial="4" don_prob="0.980" acc_prob="0.968">
            <gDNA_intron_boundary i_start="103197" i_stop="103551" i_length="355"/>
          </intron>
          <exon e_serial="5" e_score="0.998">
            <gDNA_exon_boundary e_start="103552" e_stop="104010" e_length="459"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102242" stop="102310"/>
              <exon start="102414" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="104010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M7219-2" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102244" stop="102310"/>
              <exon start="102414" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="104010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M7219-3" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCG : AAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAA : GTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG : GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTG : GCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGAACTCTTTGTTGTAAAAGATTCCCATCCATAGTTATGTTGGGTCTTCATTTCATGTATATTTCTTTGCATTATATGCACGACCTAGTTACTAATAATGCAATTCTAGTCCTTGTTAAAGAAAAATGTAATTGTAGTCCAATAGCTGGATAATCAGTGTGATTTAATTAAGTGAATGCATAGAAGAAAAACTATGCATAAGAACCCAATAGCGAGAATCATTTCAAGAAAGGGTCATTCCATTCTAAT</gDNA_template>
            <first_frame> Q  F  Q  I  S  H  L  H  R  L  T  A  T  V  T  S  V  P  A  V  D  S  P  :  K  N  L  V  N  S  L  Q  V  K  Y  L  M  V  F  L  S  W  T  R  P  S  P  E  E  Q  K  A  C  I  N  K :   S  G  S  F  N  Y  D  K  R  F  R  G  T  T  E  K  P  A  P  L  L  K  Q  D  S  E  L  A  K  D  G  F  S  V  N  C  A  R  V  L  V  G  S  G  R  E  T  F  E  K  G  K  A  A  L  Q  N  W  R :   H  F  G  L  N  W  A  F  V  D  P  K  A  Q  I  Q  S  G  T  K  F  C  V  C  V  K  E  F  F  P  W  L  M  M  P  L  Q  V  V  Y  V  S  E  N  K  N  S  K  K  G  A  S  F  S  F  G  S  G  T  L  Q  G  H  L  L  :  A  G  E  E  R  F  S  I  A  L  D  E  N  D  L  V  W  Y  E  I  L  S  F  S  K  P  A  H  L  L  S  L  F  G  Y  P  Y  V  L  L  R  Q  K  Y  F  A  H  Q  S  G  S  A  V  K  K  H  L  S  A  *  N  M  *  G  Y  N  C  V  *  T  G  T  L  C  C  K  R  F  P  S  I  V  M  L  G  L  H  F  M  Y  I  S  L  H  Y  M  H  D  L  V  T  N  N  A  I  L  V  L  V  K  E  K  C  N  C  S  P  I  A  G  *  S  V  *  F  N  *  V  N  A  *  K  K  N  Y  A  *  E  P  N  S  E  N  H  F  K  K  G  S  F  H  S  N </first_frame>
            <second_frame>  N  S  K  S  L  I  F  I  G  S  L  P  L  L  P  Q  C  R  R  W  T  L  R :   K  I  *  *  I  L  Y  R  L  S  T  *  W  Y  F  L  A  G  R  V  H  L  L  K  S  R  K  H  V  S  T   : S  L  V  P  L  T  M  I  K  D  L  E  E  L  L  R  N  L  L  L  Y  L  S  K  T  V  S  L  Q  R  M  V  S  L  L  I  V  L  E  Y  *  S  V  Q  A  V  R  L  L  K  R  E  K  L  P  F  K  I  G   : G  I  L  D  *  I  G  R  L  L  I  Q  K  L  K  F  K  V  G  Q  S  S  V  F  V  *  R  S  S  S  R  G  L  *  C  L  Y  R  L  F  M  L  A  R  T  R  T  R  K  R  G  L  R  L  V  L  A  V  E  L  C  K  D  I  C  W :   L  V  K  N  V  F  Q  *  H  W  T  K  M  I  *  F  G  T  R  Y  F  P  S  R  S  L  H  I  C  C  H  S  L  D  T  L  M  F  F  *  G  K  S  T  L  L  I  N  Q  V  V  R  *  R  N  I  Y  L  L  K  T  C  E  A  I  T  V  C  E  Q  E  L  F  V  V  K  D  S  H  P  *  L  C  W  V  F  I  S  C  I  F  L  C  I  I  C  T  T  *  L  L  I  M  Q  F  *  S  L  L  K  K  N  V  I  V  V  Q  *  L  D  N  Q  C  D  L  I  K  *  M  H  R  R  K  T  M  H  K  N  P  I  A  R  I  I  S  R  K  G  H  S  I  L   </second_frame>
            <third_frame>   I  P  N  L  S  S  S  S  A  H  C  H  C  Y  L  S  A  G  G  G  L  S   : E  K  F  S  E  F  F  T  G  *  V  L  D  G  I  S  *  L  D  A  S  I  S  *  R  A  E  S  M  Y  Q  Q  :  V  W  F  L  *  L  *  *  K  I  *  R  N  Y  *  E  T  C  S  S  T  *  A  R  Q  *  A  C  K  G  W  F  L  C  *  L  C  S  S  I  S  R  F  R  P  *  D  F  *  K  G  K  S  C  P  S  K  L  E  :  A  F  W  I  E  L  G  V  C  *  S  K  S  S  N  S  K  W  D  K  V  L  C  L  C  E  G  V  L  P  V  A  Y  D  A  S  T  G  C  L  C  *  R  E  Q  E  L  E  K  G  G  F  V  *  F  W  Q  W  N  S  A  R  T  F  A   : G  W  *  R  T  F  F  N  S  I  G  R  K  *  S  S  L  V  R  D  T  F  L  L  E  A  C  T  F  A  V  T  L  W  I  P  L  C  S  S  K  A  K  V  L  C  S  S  I  R  *  C  G  E  E  T  F  I  C  L  K  H  V  R  L  *  L  C  V  N  R  N  S  L  L  *  K  I  P  I  H  S  Y  V  G  S  S  F  H  V  Y  F  F  A  L  Y  A  R  P  S  Y  *  *  C  N  S  S  P  C  *  R  K  M  *  L  *  S  N  S  W  I  I  S  V  I  *  L  S  E  C  I  E  E  K  L  C  I  R  T  Q  *  R  E  S  F  Q  E  R  V  I  P  F  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102242" stop="102310"/>
                    <exon start="102414" stop="102508"/>
                    <exon start="102749" stop="102925"/>
                    <exon start="103001" stop="103196"/>
                    <exon start="103552" stop="103731"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>714</number_coding_nucleotides>
                  <number_encoded_amino_acids>238</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QFQISHLHRLTATVTSVPAVDSPKNLVNSLQVKYLMVFLSWTRPSPEEQKACINKSGSFNYDKRFRGTTEKPAPLLKQDSELAKDGFSVNCARVLVGSGRETFEKGKAALQNWRHFGLNWAFVDPKAQIQSGTKFCVCVKEFFPWLMMPLQVVYVSENKNSKKGASFSFGSGTLQGHLLAGEERFSIALDENDLVWYEILSFSKPAHLLSLFGYPYVLLRQKYFAHQSGSAVKKHLSA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="132482" PGL_stop="127130"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="132482" e_stop="132180"/>
            <exon e_start="132088" e_stop="131771"/>
            <exon e_start="131638" e_stop="131597"/>
            <exon e_start="130964" e_stop="130840"/>
            <exon e_start="130709" e_stop="130562"/>
            <exon e_start="129572" e_stop="129500"/>
            <exon e_start="128980" e_stop="128868"/>
            <exon e_start="128776" e_stop="128657"/>
            <exon e_start="128417" e_stop="128262"/>
            <exon e_start="128175" e_stop="127833"/>
            <exon e_start="127140" e_stop="127130"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.931" acc_prob="0.915" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.906" e_score="1.000"/>
          <exon-intron don_prob="0.862" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.848" acc_prob="0.905" e_score="0.991"/>
          <exon-intron don_prob="0.550" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.698" acc_prob="0.000" e_score="0.997"/>
          <exon-only e_score="0.909"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="132482" e_stop="132180" e_length="303"/>
          </exon>
          <intron i_serial="1" don_prob="0.931" acc_prob="0.915">
            <gDNA_intron_boundary i_start="132179" i_stop="132089" i_length="91"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="132088" e_stop="131771" e_length="318"/>
          </exon>
          <intron i_serial="2" don_prob="0.971" acc_prob="0.906">
            <gDNA_intron_boundary i_start="131770" i_stop="131639" i_length="132"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="131638" e_stop="131597" e_length="42"/>
          </exon>
          <intron i_serial="3" don_prob="0.862" acc_prob="0.987">
            <gDNA_intron_boundary i_start="131596" i_stop="130965" i_length="632"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="130964" e_stop="130840" e_length="125"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="130839" i_stop="130710" i_length="130"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="130709" e_stop="130562" e_length="148"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="130561" i_stop="129573" i_length="989"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="129572" e_stop="129500" e_length="73"/>
          </exon>
          <intron i_serial="6" don_prob="0.967" acc_prob="1.000">
            <gDNA_intron_boundary i_start="129499" i_stop="128981" i_length="519"/>
          </intron>
          <exon e_serial="7" e_score="0.991">
            <gDNA_exon_boundary e_start="128980" e_stop="128868" e_length="113"/>
          </exon>
          <intron i_serial="7" don_prob="0.848" acc_prob="0.905">
            <gDNA_intron_boundary i_start="128867" i_stop="128777" i_length="91"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="128776" e_stop="128657" e_length="120"/>
          </exon>
          <intron i_serial="8" don_prob="0.550" acc_prob="0.935">
            <gDNA_intron_boundary i_start="128656" i_stop="128418" i_length="239"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="128417" e_stop="128262" e_length="156"/>
          </exon>
          <intron i_serial="9" don_prob="0.997" acc_prob="0.994">
            <gDNA_intron_boundary i_start="128261" i_stop="128176" i_length="86"/>
          </intron>
          <exon e_serial="10" e_score="0.997">
            <gDNA_exon_boundary e_start="128175" e_stop="127833" e_length="343"/>
          </exon>
          <intron i_serial="10" don_prob="0.698" acc_prob="0.000">
            <gDNA_intron_boundary i_start="127832" i_stop="127141" i_length="692"/>
          </intron>
          <exon e_serial="11" e_score="0.909">
            <gDNA_exon_boundary e_start="127140" e_stop="127130" e_length="11"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="132482" stop="132180"/>
              <exon start="132088" stop="131771"/>
              <exon start="131638" stop="131597"/>
              <exon start="130964" stop="130840"/>
              <exon start="130709" stop="130562"/>
              <exon start="129572" stop="129500"/>
              <exon start="128980" stop="128868"/>
              <exon start="128776" stop="128657"/>
              <exon start="128417" stop="128262"/>
              <exon start="128175" stop="127833"/>
              <exon start="127140" stop="127130"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M7158" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAAGTGGTGATGCTTGTGATATTTTAGAAGTCCTTGCAGAAAATTGTAATGGTAGTGTAACTGAGCATGGGCTTGAAACTCATTCAGAGAAATATCCAGAAGAATCCAGTGGAATTGGGTACCGAGGGCAGAATCCAACTATTGAGCGTGCTATGAATGGTAAGAGAATTTCACAAAGAGATGAAAGCAAGTGGGTCCAGGTCCGAAAAGGCACTAAAATAATTGTGCAAGTTGTTAAAGAAGGATTGGGTACGAAGGGCCCAACACTGACTGCTTATCCGAAATTAAGGAGCAGATTCTGG : GTTTTAGTTCCTCGCGGCAACACGATAGGTATTTCAAAGAAGATTGCTGGTGTTGAGCGCACACGTTTAAGGGTCATTGCAAAAACTTTACAGCCTCAAGGATATGGTCTTACAGTAAGGACAGTTGCAGCTGGTCATTCACTAAATGAATTGCAGAAGGACTTGGAAGGGTTGCTTTCAACTTGGAAAAGTATAATTGAGCATGCAAAGTCTGCAGCTCTTGCCGCAGATGAAGGTGTTGATGGAGCAGTTCCTGTCATGCTTCACCAGGCAATGGGCCAAACACTTTCTGTTGTTCAAGATTATTTTAGCGATAAG : GTGAATAGTTTGGTGGTTGATTCTCCAAGGACATATCATGAG : GTTACAAACTATCTTCAAGAAATGGCACCTAATCTTTGTGAAAGAGTTGAGTTGCATGGTACAAGAACTCCCCTGTTTGATGAATACAACATTGAGGAAGAAATAAACAACATTCTCAGCAAAAG : GGTTCCCCTTGATAATGGAGGTTATTTAGTGATCGAACAGACAGAGGCTTTAGTCTCCATCGATGTAAATGGTGGACATTGTGTGCTTGGTCAAGGGACTTCACAAGAGATGGCTATTCTCAATGTTAACCTTGCAGCTGCTAGACAG : ATTGCTAGGGAAATAAGGCTGAGAGACATTGGTGGCATTATTGTGGTGGATTTCATAGATATGTTGGATGATT : CAAATAAGAGATTGGTCTATGAGGAGGTCAAGAAGGCTGTTGAGAGAGATCGATCAACAGTTAAGGTGTCTGAATTGTCCAGACATGGGCTTATGGAGATTACCAGGAAAAGA : GTTCGACCTAGTGTGACATTCATGATCAGTGAACCATGTATGTGCTGCCATGGTACGGGGAGAGTGGAAGCTTTAGCGACTGCATACTCTAAGATTGAACGTGAAATTTGCCGGTTGCTA : TCCACAACGGATCTGAAGGCAGACCCTGAAAACCCCAAGTCTTGGCCCAGATTTATTCTCAGGGTAGATCAGTACATGTCTAACTATTTAACTTCAGGAAAGAGGACAAGGCTAGCAATCTTGAGTAGTTCTCTCAAAGTTTGGCTTCTTCTAAAG : GTTGCTAGAGGTTTTACCAAAGGGACCTTTGAGCTAAAACCTTTAACAGGCGACAAGGAGTACAAGGGTGATGAACGTGAAACATCTATTTCAGTGTTGCGACCAACAGAGGGTGGATTTCACCCCCCTCGGAAAAAAGTCACCATCTTCCCCATCAAAAAGTGGAGTAGTGGAAAGTGATGTTACCTCCATTAAGAATCATCTGTACAGGTCTCAAAAAACAATGCAAATCCACATATGGTTAGCATAAATTTATTAGCCAATTCTTTCTTCCCTCTTGAGTTTTTCTCGTCGGCTTGTAAGAAATAGCTAGTTTTATGAGGAAATCAATTTTGCATAGCAT : AAAAACAAAAA</gDNA_template>
            <first_frame> E  S  G  D  A  C  D  I  L  E  V  L  A  E  N  C  N  G  S  V  T  E  H  G  L  E  T  H  S  E  K  Y  P  E  E  S  S  G  I  G  Y  R  G  Q  N  P  T  I  E  R  A  M  N  G  K  R  I  S  Q  R  D  E  S  K  W  V  Q  V  R  K  G  T  K  I  I  V  Q  V  V  K  E  G  L  G  T  K  G  P  T  L  T  A  Y  P  K  L  R  S  R  F  W  :  V  L  V  P  R  G  N  T  I  G  I  S  K  K  I  A  G  V  E  R  T  R  L  R  V  I  A  K  T  L  Q  P  Q  G  Y  G  L  T  V  R  T  V  A  A  G  H  S  L  N  E  L  Q  K  D  L  E  G  L  L  S  T  W  K  S  I  I  E  H  A  K  S  A  A  L  A  A  D  E  G  V  D  G  A  V  P  V  M  L  H  Q  A  M  G  Q  T  L  S  V  V  Q  D  Y  F  S  D  K  :  V  N  S  L  V  V  D  S  P  R  T  Y  H  E  :  V  T  N  Y  L  Q  E  M  A  P  N  L  C  E  R  V  E  L  H  G  T  R  T  P  L  F  D  E  Y  N  I  E  E  E  I  N  N  I  L  S  K  R :   V  P  L  D  N  G  G  Y  L  V  I  E  Q  T  E  A  L  V  S  I  D  V  N  G  G  H  C  V  L  G  Q  G  T  S  Q  E  M  A  I  L  N  V  N  L  A  A  A  R  Q  :  I  A  R  E  I  R  L  R  D  I  G  G  I  I  V  V  D  F  I  D  M  L  D  D   : S  N  K  R  L  V  Y  E  E  V  K  K  A  V  E  R  D  R  S  T  V  K  V  S  E  L  S  R  H  G  L  M  E  I  T  R  K  R  :  V  R  P  S  V  T  F  M  I  S  E  P  C  M  C  C  H  G  T  G  R  V  E  A  L  A  T  A  Y  S  K  I  E  R  E  I  C  R  L  L  :  S  T  T  D  L  K  A  D  P  E  N  P  K  S  W  P  R  F  I  L  R  V  D  Q  Y  M  S  N  Y  L  T  S  G  K  R  T  R  L  A  I  L  S  S  S  L  K  V  W  L  L  L  K  :  V  A  R  G  F  T  K  G  T  F  E  L  K  P  L  T  G  D  K  E  Y  K  G  D  E  R  E  T  S  I  S  V  L  R  P  T  E  G  G  F  H  P  P  R  K  K  V  T  I  F  P  I  K  K  W  S  S  G  K  *  C  Y  L  H  *  E  S  S  V  Q  V  S  K  N  N  A  N  P  H  M  V  S  I  N  L  L  A  N  S  F  F  P  L  E  F  F  S  S  A  C  K  K  *  L  V  L  *  G  N  Q  F  C  I  A   : *  K  Q  K </first_frame>
            <second_frame>  K  V  V  M  L  V  I  F  *  K  S  L  Q  K  I  V  M  V  V  *  L  S  M  G  L  K  L  I  Q  R  N  I  Q  K  N  P  V  E  L  G  T  E  G  R  I  Q  L  L  S  V  L  *  M  V  R  E  F  H  K  E  M  K  A  S  G  S  R  S  E  K  A  L  K  *  L  C  K  L  L  K  K  D  W  V  R  R  A  Q  H  *  L  L  I  R  N  *  G  A  D  S  G :   F  *  F  L  A  A  T  R  *  V  F  Q  R  R  L  L  V  L  S  A  H  V  *  G  S  L  Q  K  L  Y  S  L  K  D  M  V  L  Q  *  G  Q  L  Q  L  V  I  H  *  M  N  C  R  R  T  W  K  G  C  F  Q  L  G  K  V  *  L  S  M  Q  S  L  Q  L  L  P  Q  M  K  V  L  M  E  Q  F  L  S  C  F  T  R  Q  W  A  K  H  F  L  L  F  K  I  I  L  A  I  R :   *  I  V  W  W  L  I  L  Q  G  H  I  M  R :   L  Q  T  I  F  K  K  W  H  L  I  F  V  K  E  L  S  C  M  V  Q  E  L  P  C  L  M  N  T  T  L  R  K  K  *  T  T  F  S  A  K   : G  F  P  L  I  M  E  V  I  *  *  S  N  R  Q  R  L  *  S  P  S  M  *  M  V  D  I  V  C  L  V  K  G  L  H  K  R  W  L  F  S  M  L  T  L  Q  L  L  D  R :   L  L  G  K  *  G  *  E  T  L  V  A  L  L  W  W  I  S  *  I  C  W  M  I  :  Q  I  R  D  W  S  M  R  R  S  R  R  L  L  R  E  I  D  Q  Q  L  R  C  L  N  C  P  D  M  G  L  W  R  L  P  G  K  E :   F  D  L  V  *  H  S  *  S  V  N  H  V  C  A  A  M  V  R  G  E  W  K  L  *  R  L  H  T  L  R  L  N  V  K  F  A  G  C  Y :   P  Q  R  I  *  R  Q  T  L  K  T  P  S  L  G  P  D  L  F  S  G  *  I  S  T  C  L  T  I  *  L  Q  E  R  G  Q  G  *  Q  S  *  V  V  L  S  K  F  G  F  F  *  R :   L  L  E  V  L  P  K  G  P  L  S  *  N  L  *  Q  A  T  R  S  T  R  V  M  N  V  K  H  L  F  Q  C  C  D  Q  Q  R  V  D  F  T  P  L  G  K  K  S  P  S  S  P  S  K  S  G  V  V  E  S  D  V  T  S  I  K  N  H  L  Y  R  S  Q  K  T  M  Q  I  H  I  W  L  A  *  I  Y  *  P  I  L  S  S  L  L  S  F  S  R  R  L  V  R  N  S  *  F  Y  E  E  I  N  F  A  *  H  :  K  N  K   </second_frame>
            <third_frame>   K  W  *  C  L  *  Y  F  R  S  P  C  R  K  L  *  W  *  C  N  *  A  W  A  *  N  S  F  R  E  I  S  R  R  I  Q  W  N  W  V  P  R  A  E  S  N  Y  *  A  C  Y  E  W  *  E  N  F  T  K  R  *  K  Q  V  G  P  G  P  K  R  H  *  N  N  C  A  S  C  *  R  R  I  G  Y  E  G  P  N  T  D  C  L  S  E  I  K  E  Q  I  L   : G  F  S  S  S  R  Q  H  D  R  Y  F  K  E  D  C  W  C  *  A  H  T  F  K  G  H  C  K  N  F  T  A  S  R  I  W  S  Y  S  K  D  S  C  S  W  S  F  T  K  *  I  A  E  G  L  G  R  V  A  F  N  L  E  K  Y  N  *  A  C  K  V  C  S  S  C  R  R  *  R  C  *  W  S  S  S  C  H  A  S  P  G  N  G  P  N  T  F  C  C  S  R  L  F  *  R  *   : G  E  *  F  G  G  *  F  S  K  D  I  S  *   : G  Y  K  L  S  S  R  N  G  T  *  S  L  *  K  S  *  V  A  W  Y  K  N  S  P  V  *  *  I  Q  H  *  G  R  N  K  Q  H  S  Q  Q  K  :  G  S  P  *  *  W  R  L  F  S  D  R  T  D  R  G  F  S  L  H  R  C  K  W  W  T  L  C  A  W  S  R  D  F  T  R  D  G  Y  S  Q  C  *  P  C  S  C  *  T   : D  C  *  G  N  K  A  E  R  H  W  W  H  Y  C  G  G  F  H  R  Y  V  G  *  F :   K  *  E  I  G  L  *  G  G  Q  E  G  C  *  E  R  S  I  N  S  *  G  V  *  I  V  Q  T  W  A  Y  G  D  Y  Q  E  K   : S  S  T  *  C  D  I  H  D  Q  *  T  M  Y  V  L  P  W  Y  G  E  S  G  S  F  S  D  C  I  L  *  D  *  T  *  N  L  P  V  A   : I  H  N  G  S  E  G  R  P  *  K  P  Q  V  L  A  Q  I  Y  S  Q  G  R  S  V  H  V  *  L  F  N  F  R  K  E  D  K  A  S  N  L  E  *  F  S  Q  S  L  A  S  S  K   : G  C  *  R  F  Y  Q  R  D  L  *  A  K  T  F  N  R  R  Q  G  V  Q  G  *  *  T  *  N  I  Y  F  S  V  A  T  N  R  G  W  I  S  P  P  S  E  K  S  H  H  L  P  H  Q  K  V  E  *  W  K  V  M  L  P  P  L  R  I  I  C  T  G  L  K  K  Q  C  K  S  T  Y  G  *  H  K  F  I  S  Q  F  F  L  P  S  *  V  F  L  V  G  L  *  E  I  A  S  F  M  R  K  S  I  L  H  S  I :   K  T  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="132482" stop="132180"/>
                    <exon start="132088" stop="131771"/>
                    <exon start="131638" stop="131597"/>
                    <exon start="130964" stop="130840"/>
                    <exon start="130709" stop="130562"/>
                    <exon start="129572" stop="129500"/>
                    <exon start="128980" stop="128868"/>
                    <exon start="128776" stop="128657"/>
                    <exon start="128417" stop="128262"/>
                    <exon start="128175" stop="127996"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1575</number_coding_nucleotides>
                  <number_encoded_amino_acids>525</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ESGDACDILEVLAENCNGSVTEHGLETHSEKYPEESSGIGYRGQNPTIERAMNGKRISQRDESKWVQVRKGTKIIVQVVKEGLGTKGPTLTAYPKLRSRFWVLVPRGNTIGISKKIAGVERTRLRVIAKTLQPQGYGLTVRTVAAGHSLNELQKDLEGLLSTWKSIIEHAKSAALAADEGVDGAVPVMLHQAMGQTLSVVQDYFSDKVNSLVVDSPRTYHEVTNYLQEMAPNLCERVELHGTRTPLFDEYNIEEEINNILSKRVPLDNGGYLVIEQTEALVSIDVNGGHCVLGQGTSQEMAILNVNLAAARQIAREIRLRDIGGIIVVDFIDMLDDSNKRLVYEEVKKAVERDRSTVKVSELSRHGLMEITRKRVRPSVTFMISEPCMCCHGTGRVEALATAYSKIEREICRLLSTTDLKADPENPKSWPRFILRVDQYMSNYLTSGKRTRLAILSSSLKVWLLLKVARGFTKGTFELKPLTGDKEYKGDERETSISVLRPTEGGFHPPRKKVTIFPIKKWSSGK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 18 chains have been computed
$ 
$ memory statistics:
$ 367728 bytes spliced alignments in total
$ 12 spliced alignments have been stored
$ 30644 bytes was the average size of a spliced alignment
$ 15072 bytes predicted gene locations in total
$ 8 predicted gene locations have been stored
$ 1884 bytes was the average size of a predicted gene location
$ 6 megabytes was the average size of the backtrace matrix
$ 20 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-27 20:02:24
-->
