<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 08:44:17"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U582213" ref_strand="+" ref_description="SGN-U582213 Tomato 200607#2 [26 ESTs aligned] (*GB) gi|157345385|emb|CAO14683.1| (e_value=2e-164) unnamed; (*ATH) AT3G01640.1 (e_value=1e-161) | Symbol: None | GHMP kinase family protein, contains GHMP kinases putative ATP-binding protein domain, Pfam:PF00288 | chr3:239388-241450 FORWARD | Aliases: F4P13.18, F4P13_18; ">
      <seq>cagtagctaacgattagatctatagattccaatttctgcagtaacacctacaataagcaacaatggcggcagtgatcgagcacaagtcttacgctagagttggactgcttggaaaccctagcgatgtttattttgggaacactatatccttcagcctcgggaatttttgggcttctgttcgtttggaaccttctatagatctcgtcattgttcctcatccttctcacgatctcgtccaattcaattcaatttctcacctggtgaacaggttgcagaatgaggggtactatggaggggttcgtttacttatggcaatcgttaaaatatttcacaactattgcaaagagagcaacatcaccttacatgatgggaatttcactctctcgtatgacactaacattccccgccagacagggctttcaggttctagtgcaatcgtaagtgctgcactgagttgccttcttgatttttacaaagtcagacatctcatcaaagttgaggtaaggccgaaccttgtccttaatgcagagaaggaacttggaattgttgcaggtcttcaagatagagtggcccaggtgtatggaggcgttgtatatatggactttgacaagaatcacatggatgaattaggtcatggcatatatacacccatggatgttgatcttctcccacctctttatctgatctatgcagaaaatcccagtgattctggaaaggtacatagtacagttcgacaaagatggttagatggtgataaatttataagatcaaccattgaagaggttgcaaatatagctgtggagggacggaaagctcttcttgagaaggactacaataagttagcagccctcatgaatcacaattttgacttgagaaggcgtatgtttggagataatgcccttggagctatgaatatagagatggttgaaatcgctcgaaaggtaggtgctgcttccaagttcacaggaagtggtggggctgtggttgtgtactgtccggatggaacttcacaagtgaagcagctggaggacgcatgccacaaagctggtttcacttttcaaccaattaaagttatgccttcgtttctaaacgaaactgatcttcaaactctgaaatcaaagtgaaaatgatgatctgctttcaaatatgtcgagagtcctctttattctttatttctttcacctttcattggcatatgctaagcgcttttcaccaagtatgtagcgaccattgaaagaaatgctagtatagatagttttagttacaattgttttgctgctattgtaatgcatttcgagaagcgcttactttacagttttagcgtaaaccgtcattagattcacatattttaactccaattgtgtgatgccaattataattactactaaatctgttacttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="-" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="4019" stop="55"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3719" g_stop="3460" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="260" r_length="260" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3459" i_stop="3194" i_length="266">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="3193" g_stop="3044" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="410" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="3043" i_stop="2560" i_length="484">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.871" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2559" g_stop="2371" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="599" r_length="189" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="2370" i_stop="2277" i_length="94">
            <donor d_prob="0.668" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="2276" g_stop="2160" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="600" r_stop="716" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="2159" i_stop="1776" i_length="384">
            <donor d_prob="0.752" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="1775" g_stop="1615" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="717" r_stop="877" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="1614" i_stop="879" i_length="736">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="878" g_stop="355" g_length="524"/>
          <reference_exon_boundary r_type="cDNA" r_start="878" r_stop="1401" r_length="524" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="-" ref_id="SGN-U582213" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1401</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U582213" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3719" e_stop="3460"/>
          <exon e_start="3193" e_stop="3044"/>
          <exon e_start="2559" e_stop="2371"/>
          <exon e_start="2276" e_stop="2160"/>
          <exon e_start="1775" e_stop="1615"/>
          <exon e_start="878" e_stop="355"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTAGCTAACGATTAGATCTATAGATTCCAATTTCTGCAGTAACACCTACAATAAGCAACAATGGCGGCAGTGATCGAGCACAAGTCTTACGCTAGAGTTGGACTGCTTGGAAACCCTAGCGATGTTTATTTTGGGAACACTATATCCTTCAGCCTCGGGAATTTTTGGGCTTCTGTTCGTTTGGAACCTTCTATAGATCTCGTCATTGTTCCTCATCCTTCTCACGATCTCGTCCAATTCAATTCAATTTCTCACCTGGTATTCTATCTTATACTTCTCCTTTATTCATCTGTTTTACTTATACTGTTTTCGGTTATCAGGATATATTAGAATTATTGACATGCCAATGCGTTTATACTTTGGGATGCGTTTATCAGGATATATAATTGATGTTTAATTAATCATTGATTAGCCAATTCTGATTGGTATTTTCATAATCAAGATCAGAAATTTAACACTTTTTTTTTAGTTCTATGTGGATTCTCTTGCAGGTTGATTGAATTTGACTTAACACTTGGCTGTAGGTGAACAGGTTGCAGAATGAGGGGTACTATGGAGGGGTTCGTTTACTTATGGCAATCGTTAAAATATTTCACAACTATTGCAAAGAGAGCAACATCACCTTACATGATGGGAATTTCACTCTCTCGTATGACACTAACATTCCCCGCCAGGTAGAACCTAACATTGCAAGATTTATCTGCCCTTCGATAGATAAGTTATGTGGATTGGAATCACGTTAGCTAATTGTTGTTAAACTCTTACTAAACGTTCTTTGACTTGAAACTGCTCAAATATAGAGTGAGCTTCTGTTTATATGGTCCTATTGTTTGGTTTTGGAAATGTCTTTTCGTAGGTTTACAATTTATCTAAAATGTCTTAGTCGAGTAAAATAATTCTTTAATTTCAACCAGGCACAATCAAAACCTACATCTCGGACGTTGAAACTTTACATACTACCTTCTGGATTTTAGCTATGCAAATAAATTAGGAGTGAAATACATGCTTGTTTCAATCATAACTGACATTACATCACACTACTTCATGATCATGATCTGAATATGGCATTGCTATATGATGAATAAGATAAATAAAAGATTTGATTTATCTCATGTTGAAAAAGTTTGATTAACATATCAAATACTTTCCACATCTCAGACAGGGCTTTCAGGTTCTAGTGCAATCGTAAGTGCTGCACTGAGTTGCCTTCTTGATTTTTACAAAGTCAGACATCTCATCAAAGTTGAGGTAAGGCCGAACCTTGTCCTTAATGCAGAGAAGGAACTTGGAATTGTTGCAGGTCTTCAAGATAGAGTGGCCCAGGTGTATGGAGGCGTTGTATATATGGTGTGTATGTGTGATACTCTTTTTTATCTTTGACAAGTAGCTTGTAGTTGTAAAGTAAATATTGCATGTTCATCTTTAAACCTTTATTTTGCAGGACTTTGACAAGAATCACATGGATGAATTAGGTCATGGCATATATACACCCATGGATGTTGATCTTCTCCCACCTCTTTATCTGATCTATGCAGAAAATCCCAGTGATTCTGGAAAGGTTTGAACTTAATGTGCAGAATATGAGTGAAAAATCTCTGTTGTCTGGCCAAAGATTCTATAGATGAGTGTTATTTGCTTAGCCATGCAATGGGTTAGAATATTACATTTTGGTTTTCACTTCACACTAAGAATTAGACAACGAGTATTGATGTAGGCTTATAGTCCACGGGGCAGCCCCTTTATTTTCAGTAATTATTTAACAGGGTAACCTCTTATATGATTCCAGTATTTATTGAATATTTTCCAGACAATGGATGACATAACAATTGCAGCAGTTTCTCAAGGAATTGTGAATATCAGTGTCCGGATTAACTTTGTCACTAATAGTTACTTTGTTGACAGTAGTTACAAAATATAGATGATACTTTTTTTTCAAATGCAGGTACATAGTACAGTTCGACAAAGATGGTTAGATGGTGATAAATTTATAAGATCAACCATTGAAGAGGTTGCAAATATAGCTGTGGAGGGACGGAAAGCTCTTCTTGAGAAGGACTACAATAAGTTAGCAGCCCTCATGAATCACAATTTTGACTTGAGAAGGTAATATACATGCTTAGTTTAATGAGGGTTACATTTGTTAATATCTTTTATGTGCTTCGTGGCGTCCCCAACACCTATTTGATAGTGTCATGTGTCATGACCTGCCACCTTACCCTTCAAATTTTGCACTGGAAGAGGGGACGAAGAACCTAAAGTTGTGGAGAGGTCAGTGGAAGACTCTAGAATAACTTAGAAGATATCGTAGAAAGCTTTAGAATTCTCTAGACTAGTAGAGAATTCTAGAGCATGGACTAAAGTATAAATAAGAGTGATATGTGAAGTAAATATTATTTACTAGGTCCTAGGAAGTAGTATAAATAGAAGGGTCTCTCATTTGGAAGGCTTCCAAGAAGCAAGCAATCACTCAAGTTGTAAATAATGTTTCGAGCAATACAAAACCTTCTTATAAAACTCTCTTGTCTTTCTTTTCATTCTCTTAGCGACCTTAAGTGTAAATGACTTACTTGAGCTTACAAGACCTTGAAAGATTAGTGAGTAAGTAGTCGAGTGCTGGCTTTAGTGAGACTCTCTTAGTCCATGACAATATCATGACCCATTTGTTTTCATGTTATTACTTGTAACAATTTCATGTGCTGTCACAATGCACTTTTACCTCCCTTTTGCATCTTATTTCATGGTGTTATGATATACTCAAATATTGCTAAGATTTTATCACAGAAAGCAGGTAATATGATATGCAAATGGAATACTTTAATATTGTGGGTCTACTATGTAGGCGTATGTTTGGAGATAATGCCCTTGGAGCTATGAATATAGAGATGGTTGAAATCGCTCGAAAGGTAGGTGCTGCTTCCAAGTTCACAGGAAGTGGTGGGGCTGTGGTTGTGTACTGTCCGGATGGAACTTCACAAGTGAAGCAGCTGGAGGACGCATGCCACAAAGCTGGTTTCACTTTTCAACCAATTAAAGTTATGCCTTCGTTTCTAAACGAAACTGATCTTCAAACTCTGAAATCAAAGTGAAAATGATGATCTGCTTTCAAATATGTCGAGAGTCCTCTTTATTCTTTATTTCTTTCACCTTTCATTGGCATATGCTAAGCGCTTTTCACCAAGTATGTAGCGACCATTGAAAGAAATGCTAGTATAGATAGTTTTAGTTACAATTGTTTTGCTGCTATTGTAATGCATTTCGAGAAGCGCTTACTTTACAGTTTTAGCGTAAACCGTCATTAGATTCACATATTTTAACTCCAATTGTGTGATGCCAATTATAATTACTACTAAATCTGTTACTTCT</genome_strand>
        <mrna_strand>CAGTAGCTAACGATTAGATCTATAGATTCCAATTTCTGCAGTAACACCTACAATAAGCAACAATGGCGGCAGTGATCGAGCACAAGTCTTACGCTAGAGTTGGACTGCTTGGAAACCCTAGCGATGTTTATTTTGGGAACACTATATCCTTCAGCCTCGGGAATTTTTGGGCTTCTGTTCGTTTGGAACCTTCTATAGATCTCGTCATTGTTCCTCATCCTTCTCACGATCTCGTCCAATTCAATTCAATTTCTCACCTG..........................................................................................................................................................................................................................................................................GTGAACAGGTTGCAGAATGAGGGGTACTATGGAGGGGTTCGTTTACTTATGGCAATCGTTAAAATATTTCACAACTATTGCAAAGAGAGCAACATCACCTTACATGATGGGAATTTCACTCTCTCGTATGACACTAACATTCCCCGCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGGCTTTCAGGTTCTAGTGCAATCGTAAGTGCTGCACTGAGTTGCCTTCTTGATTTTTACAAAGTCAGACATCTCATCAAAGTTGAGGTAAGGCCGAACCTTGTCCTTAATGCAGAGAAGGAACTTGGAATTGTTGCAGGTCTTCAAGATAGAGTGGCCCAGGTGTATGGAGGCGTTGTATATATG..............................................................................................GACTTTGACAAGAATCACATGGATGAATTAGGTCATGGCATATATACACCCATGGATGTTGATCTTCTCCCACCTCTTTATCTGATCTATGCAGAAAATCCCAGTGATTCTGGAAAG................................................................................................................................................................................................................................................................................................................................................................................................GTACATAGTACAGTTCGACAAAGATGGTTAGATGGTGATAAATTTATAAGATCAACCATTGAAGAGGTTGCAAATATAGCTGTGGAGGGACGGAAAGCTCTTCTTGAGAAGGACTACAATAAGTTAGCAGCCCTCATGAATCACAATTTTGACTTGAGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTATGTTTGGAGATAATGCCCTTGGAGCTATGAATATAGAGATGGTTGAAATCGCTCGAAAGGTAGGTGCTGCTTCCAAGTTCACAGGAAGTGGTGGGGCTGTGGTTGTGTACTGTCCGGATGGAACTTCACAAGTGAAGCAGCTGGAGGACGCATGCCACAAAGCTGGTTTCACTTTTCAACCAATTAAAGTTATGCCTTCGTTTCTAAACGAAACTGATCTTCAAACTCTGAAATCAAAGTGAAAATGATGATCTGCTTTCAAATATGTCGAGAGTCCTCTTTATTCTTTATTTCTTTCACCTTTCATTGGCATATGCTAAGCGCTTTTCACCAAGTATGTAGCGACCATTGAAAGAAATGCTAGTATAGATAGTTTTAGTTACAATTGTTTTGCTGCTATTGTAATGCATTTCGAGAAGCGCTTACTTTACAGTTTTAGCGTAAACCGTCATTAGATTCACATATTTTAACTCCAATTGTGTGATGCCAATTATAATTACTACTAAATCTGTTACTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U582212" ref_strand="+" ref_description="SGN-U582212 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|195628732|gb|ACG36196.1| (e_value=1e-64) ATP; (*ATH) AT3G01640.1 (e_value=1e-30) | Symbol: None | GHMP kinase family protein, contains GHMP kinases putative ATP-binding protein domain, Pfam:PF00288 | chr3:239388-241450 FORWARD | Aliases: F4P13.18, F4P13_18; ">
      <seq>ggaccgctgtagattccaatatctgccgtaacagtagctaacgattagatctatagattccaatttctgcagtaacacctacaataagcaacaatggcggcagtgatcgagcacaagtcttacgctagagttggactgcttggaaaccctagcgatgtttattttggaaacactatatccttcagcctcgggaatttttgggcttctgttcgtttggaaccttctatagatctcgtcattgttcctcatccttctcacgatctcgtccaattcaattcaatttctcacctgttctatgtggattctcttgcaggttgattgaatttgacttaacacttggctgtaggtgaacaggttgcagaatgaggggtactatggaggggttcgtttacttatggcaatcgttaaaatatttcacaactattgcaaagagagcaacatcaccttacatgatgggaatttcactctctcgtatgacactaacattcccccgccagacagggctttcaggttctagtgcaatcgtaagtgctgcactgagttgccttcttgatttttacaaagtcagacatctcatcaaagttgaggtaaggccgaaccttgtccttaatgcagagaaggaacttggaattgttgcaggtcttcaagatagagtggcccaggtgtatgggagcgttgtatatatggactttgancagaatcacatggatgaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="-" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="4049" stop="1948"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3750" g_stop="3460" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3459" i_stop="3249" i_length="211">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="3248" g_stop="3044" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="497" r_length="206" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="3043" i_stop="2560" i_length="484">
            <donor d_prob="0.976" d_score="0.96"/>
            <acceptor a_prob="0.871" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2559" g_stop="2371" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="498" r_stop="686" r_length="189" r_score="0.989"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="2370" i_stop="2277" i_length="94">
            <donor d_prob="0.668" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="2276" g_stop="2248" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="687" r_stop="715" r_length="29" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="-" ref_id="SGN-U582212" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U582212" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3750" e_stop="3460"/>
          <exon e_start="3248" e_stop="3044"/>
          <exon e_start="2559" e_stop="2371"/>
          <exon e_start="2276" e_stop="2248"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACCGCTGTAGATTCCAATATCTGCCGTAACAGTAGCTAACGATTAGATCTATAGATTCCAATTTCTGCAGTAACACCTACAATAAGCAACAATGGCGGCAGTGATCGAGCACAAGTCTTACGCTAGAGTTGGACTGCTTGGAAACCCTAGCGATGTTTATTTTGGGAACACTATATCCTTCAGCCTCGGGAATTTTTGGGCTTCTGTTCGTTTGGAACCTTCTATAGATCTCGTCATTGTTCCTCATCCTTCTCACGATCTCGTCCAATTCAATTCAATTTCTCACCTGGTATTCTATCTTATACTTCTCCTTTATTCATCTGTTTTACTTATACTGTTTTCGGTTATCAGGATATATTAGAATTATTGACATGCCAATGCGTTTATACTTTGGGATGCGTTTATCAGGATATATAATTGATGTTTAATTAATCATTGATTAGCCAATTCTGATTGGTATTTTCATAATCAAGATCAGAAATTTAACACTTTTTTTTTAGTTCTATGTGGATTCTCTTGCAGGTTGATTGAATTTGACTTAACACTTGGCTGTAGGTGAACAGGTTGCAGAATGAGGGGTACTATGGAGGGGTTCGTTTACTTATGGCAATCGTTAAAATATTTCACAACTATTGCAAAGAGAGCAACATCACCTTACATGATGGGAATTTCACTCTCTCGTATGACACTAACATT-CCCCGCCAGGTAGAACCTAACATTGCAAGATTTATCTGCCCTTCGATAGATAAGTTATGTGGATTGGAATCACGTTAGCTAATTGTTGTTAAACTCTTACTAAACGTTCTTTGACTTGAAACTGCTCAAATATAGAGTGAGCTTCTGTTTATATGGTCCTATTGTTTGGTTTTGGAAATGTCTTTTCGTAGGTTTACAATTTATCTAAAATGTCTTAGTCGAGTAAAATAATTCTTTAATTTCAACCAGGCACAATCAAAACCTACATCTCGGACGTTGAAACTTTACATACTACCTTCTGGATTTTAGCTATGCAAATAAATTAGGAGTGAAATACATGCTTGTTTCAATCATAACTGACATTACATCACACTACTTCATGATCATGATCTGAATATGGCATTGCTATATGATGAATAAGATAAATAAAAGATTTGATTTATCTCATGTTGAAAAAGTTTGATTAACATATCAAATACTTTCCACATCTCAGACAGGGCTTTCAGGTTCTAGTGCAATCGTAAGTGCTGCACTGAGTTGCCTTCTTGATTTTTACAAAGTCAGACATCTCATCAAAGTTGAGGTAAGGCCGAACCTTGTCCTTAATGCAGAGAAGGAACTTGGAATTGTTGCAGGTCTTCAAGATAGAGTGGCCCAGGTGTATGGAGGCGTTGTATATATGGTGTGTATGTGTGATACTCTTTTTTATCTTTGACAAGTAGCTTGTAGTTGTAAAGTAAATATTGCATGTTCATCTTTAAACCTTTATTTTGCAGGACTTTGACAAGAATCACATGGATGAATT</genome_strand>
        <mrna_strand>GGACCGCTGTAGATTCCAATATCTGCCGTAACAGTAGCTAACGATTAGATCTATAGATTCCAATTTCTGCAGTAACACCTACAATAAGCAACAATGGCGGCAGTGATCGAGCACAAGTCTTACGCTAGAGTTGGACTGCTTGGAAACCCTAGCGATGTTTATTTTGGAAACACTATATCCTTCAGCCTCGGGAATTTTTGGGCTTCTGTTCGTTTGGAACCTTCTATAGATCTCGTCATTGTTCCTCATCCTTCTCACGATCTCGTCCAATTCAATTCAATTTCTCACCTG...................................................................................................................................................................................................................TTCTATGTGGATTCTCTTGCAGGTTGATTGAATTTGACTTAACACTTGGCTGTAGGTGAACAGGTTGCAGAATGAGGGGTACTATGGAGGGGTTCGTTTACTTATGGCAATCGTTAAAATATTTCACAACTATTGCAAAGAGAGCAACATCACCTTACATGATGGGAATTTCACTCTCTCGTATGACACTAACATTCCCCCGCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGGCTTTCAGGTTCTAGTGCAATCGTAAGTGCTGCACTGAGTTGCCTTCTTGATTTTTACAAAGTCAGACATCTCATCAAAGTTGAGGTAAGGCCGAACCTTGTCCTTAATGCAGAGAAGGAACTTGGAATTGTTGCAGGTCTTCAAGATAGAGTGGCCCAGGTGTATGGGAGCGTTGTATATATG..............................................................................................GACTTTGANCAGAATCACATGGATGAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584150" ref_strand="+" ref_description="SGN-U584150 Tomato 200607#2 [11 ESTs aligned] (*GB) gi|157345386|emb|CAO14684.1| (e_value=0) unnamed; (*ATH) AT3G27540.1 (e_value=2e-180)  Symbol: None | glycosyl transferase family 17 protein, low similarity to beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC 2.4.1.144) from Mus musculus (SP:Q10470), Rattus norvegicus (SP:Q02527), Homo sapiens (SP:Q09327) ; ... ; (*SWP) sp|Q02527|MGAT3_RAT (e_value=1e-17) Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase OS=Rattus norvegicus GN=Mgat3; ">
      <seq>aggtgaaggagaagatacagcgtgggtggggggtggggggtggggttgcatcgtgtgtgtctctatatatagtttatctgtagaaagagtgttgaattagaagaaaaagaagaagaacacaacaaacggctacaatttagcgtgtttttatatagtcaaattcaatccactaagaaaaaaaaattgtaaaataacttcccctctcattgataatggcaattccattgctgtaaatttgagagggaagggggtttcttttttcttcagacaatctctcttttcataattcgtttattttctgaattttacagaaggtaacaaaaaatcttgaaaaagagaggaaaaaaattggaagaagccaaagtttcattggccatttttagagaaggggtttgaagaaattatcttggtagtgctcatggtgcctgatatttattacccttcaaagaaaagcgacgatttttgtgaagacgtttgtggcgagcagtctacccctggaatagtaagcatgtcaagattaaggtgtatgcttcgaggattggatttaaaggctattgtcttcttggttgtttttgtgccattatgtatagttggtatatacttgcatggacagaagattacctacttcctccgaccaatatggcaatctcctccaaagccctttattgaacttacccattattatcatgagaatgtctccatggagaatctttgcaagcaacatggatggggaattcgtgaatatcctaggcgtgtctatgatgctgttttgtttagtaatgaagtggacatgcttactatcagatggaaggaattgtatccttacatcacacagtttgttctgctcgagtcaaactccacgtttactggattaccaaaaccatttacttttgctattaaccgggaccaatttaagtttgttgagcctcgattgacttatggaaccattggaggaagattcaggaaaggtgaaaatccgtttgttgaagaggcatatcagagagtagcactcgaccagcttttgagaatagctggaatagaggatgatgatttgctgataatgtccgatgttgatgaaattcctagcaggcacaccatcgatcttttaagatggtgtgatgacattcctccaattcttcaccttcattttaggaattacttgtactcttttgaatttgagcttaagcacagaagttggagagcttcagtccacaggtatcagagtggcaagactcgatacgtacactatcgtcagactgattaccttttggcagattcaggttggcattgtagcttttgcttccgccacatctctgacttcatattcaaaatgaaagcttacagccacactgatagagtgaggttcttgcattatttgaaccctagaagaatacaagatatcatttgtgaaggatctgatttatatgacatgcttcctgaggagtacacattcaaggatatcattggtaacatgggacctctacctcattcttactcagccgtgcatcttcctgcgcatttgctggataatcccgagaagtataagtatctcttgcctgggaactgcaaaagagaaagtggctaagttgttaccacaaagttggacgcattttcgtacataggaggtgttcatgtgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="+" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="16888" stop="19613"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17188" g_stop="17671" g_length="484"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="484" r_length="484" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17672" i_stop="18158" i_length="487">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18159" g_stop="19313" g_length="1155"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="1638" r_length="1154" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="+" ref_id="SGN-U584150" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1639</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U584150" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17188" e_stop="17671"/>
          <exon e_start="18159" e_stop="19313"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTGAAGGAGAAGATACAGCGTGGGTGGGGGGTGGGGGGTGGGGTTGCATCGTGTGTGTCTCTATATATAGTTTATCTGTAGAAAGAGTGTTGAATTAGAAGAAAAAGAAGAAGAACACAACAAACGGCTACAATTTAGCGTGTTTTTATATAGTCAAATTCAATCCACTAAGAAAAAAAAATTGTAAAATAACTTCCCCTCTCATTGATAATGGCAATTCCATTGCTGTAAATTTGAGAGGGAAGGGGGTTTCTTTTTTCTTCAGACAATCTCTCTTTTCATAATTCGTTTATTTTCTGAATTTTACAGAAGGTAACAAAAAATCTTGAAAAAGAGAGGAAAAAAATTGGAAGAAGCCAAAGTTTCATTGGCCATTTTTAGAGAAGGGGTTTGAAGAAATTATCTTGGTAGTGCTCATGGTGCCTGATATTTATTACCCTTCAAAGAAAAGCGACGATTTTTGTGAAGACGTTTGTGGCGAGGTACCTTTTTTCCCTTTTAATTGTCATTCACCATTTTATGTGCTTAATAGTTTGGAATTTTTAGTAAATATTGGTTTTTTGTTGTTGGGTTTCTGGGGAATTATGAAATATGTTGTTGTCTTTTTTCATTCTGGTATTGCTTATAAACCCTAAAATCTTGAATTGGGATGATGTGGGGTTGCTCTGCTTCCAAAGAGGAATTTTATTTTCATAACAATATGCAATTTGGTTGTTTTTTCTTCTGGAAATTTGTGGGTGTGTTGGGGTTTTGGGAACTATTCATATGGATATTATCTAAACTGATGGAAGGTTCAGTTTTCTTATGGTTGGATGAAAAGCTTTGAAACAAAAAATTAATATGTTGTTCTCCTCTTGAAAGATATTTGGGAATTTCTAAGGGGTTCAATAAACTAATGTGTGAATATTTGATTGTTTCAAAGGTTTGCTGCTATTTGCATCTTTCTAAAATCATTTTTTTGATATGCAGCAGTCTACCCCTGGAATAGTAAGCATGTCAAGATTAAGGTGTATGCTTCGAGGATTGGATTTAAAGGCTATTGTCTTCTTGGTTGTTTTTGTGCCATTATGTATAGTTGGTATATACTTGCATGGACAGAAGATTACCTACTTCCTCCGACCAATATGGCAATCTCCTCCAAAGCCCTTTATTGAACTTACCCATTATTATCATGAGAATGTCTCCATGGAGAATCTTTGCAAGCAACATGGATGGGGAATTCGTGAATATCCTAGGCGTGTCTATGATGCTGTTTTGTTTAGTAATGAAGTGGACATGCTTACTATCAGATGGAAGGAATTGTATCCTTACATCACACAGTTTGTTCTGCTCGAGTCAAACTCCACGTTTACTGGATTACCAAAACCATTTACTTTTGCTATTAACCGGGACCAATTTAAGTTTGTTGAGCCTCGATTGACTTATGGAACCATTGGAGGAAGATTCAGGAAAGGTGAAAATCCGTTTGTTGAAGAGGCATATCAGAGAGTAGCACTCGACCAGCTTTTGAGAATAGCTGGAATAGAGGATGATGATTTGCTGATAATGTCCGATGTTGATGAAATTCCTAGCAGGCACACCATCGATCTTTTAAGATGGTGTGATGACATTCCTCCAATTCTTCACCTTCATTTTAGGAATTACTTGTACTCTTTTGAATTTGAGCTTAAGCACAGAAGTTGGAGAGCTTCAGTCCACAGGTATCAGAGTGGCAAGACTCGATACGTACACTATCGTCAGACTGATTACCTTTTGGCAGATTCAGGTTGGCATTGTAGCTTTTGCTTCCGCCACATCTCTGACTTCATATTCAAAATGAAAGCTTACAGCCACACTGATAGAGTGAGGTTCTTGCATTATTTGAACCCTAGAAGAATACAAGATATCATTTGTGAAGGATCTGATTTATATGACATGCTTCCTGAGGAGTACACATTCAAGGATATCATTGGTAACATGGGACCTCTACCTCATTCTTACTCAGCCGTGCATCTTCCTGCGCATTTGCTGGATAATCCCGAGAAGTATAAGTATCTCTTGCCTGGGAACTGCAAAAGAGAAAGTGGCTAAGTTGTTACCACAAAGTTGGACGCATTTTCGTAACATAGGAGGTGTTCATGTGCC</genome_strand>
        <mrna_strand>AGGTGAAGGAGAAGATACAGCGTGGGTGGGGGGTGGGGGGTGGGGTTGCATCGTGTGTGTCTCTATATATAGTTTATCTGTAGAAAGAGTGTTGAATTAGAAGAAAAAGAAGAAGAACACAACAAACGGCTACAATTTAGCGTGTTTTTATATAGTCAAATTCAATCCACTAAGAAAAAAAAATTGTAAAATAACTTCCCCTCTCATTGATAATGGCAATTCCATTGCTGTAAATTTGAGAGGGAAGGGGGTTTCTTTTTTCTTCAGACAATCTCTCTTTTCATAATTCGTTTATTTTCTGAATTTTACAGAAGGTAACAAAAAATCTTGAAAAAGAGAGGAAAAAAATTGGAAGAAGCCAAAGTTTCATTGGCCATTTTTAGAGAAGGGGTTTGAAGAAATTATCTTGGTAGTGCTCATGGTGCCTGATATTTATTACCCTTCAAAGAAAAGCGACGATTTTTGTGAAGACGTTTGTGGCGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCTACCCCTGGAATAGTAAGCATGTCAAGATTAAGGTGTATGCTTCGAGGATTGGATTTAAAGGCTATTGTCTTCTTGGTTGTTTTTGTGCCATTATGTATAGTTGGTATATACTTGCATGGACAGAAGATTACCTACTTCCTCCGACCAATATGGCAATCTCCTCCAAAGCCCTTTATTGAACTTACCCATTATTATCATGAGAATGTCTCCATGGAGAATCTTTGCAAGCAACATGGATGGGGAATTCGTGAATATCCTAGGCGTGTCTATGATGCTGTTTTGTTTAGTAATGAAGTGGACATGCTTACTATCAGATGGAAGGAATTGTATCCTTACATCACACAGTTTGTTCTGCTCGAGTCAAACTCCACGTTTACTGGATTACCAAAACCATTTACTTTTGCTATTAACCGGGACCAATTTAAGTTTGTTGAGCCTCGATTGACTTATGGAACCATTGGAGGAAGATTCAGGAAAGGTGAAAATCCGTTTGTTGAAGAGGCATATCAGAGAGTAGCACTCGACCAGCTTTTGAGAATAGCTGGAATAGAGGATGATGATTTGCTGATAATGTCCGATGTTGATGAAATTCCTAGCAGGCACACCATCGATCTTTTAAGATGGTGTGATGACATTCCTCCAATTCTTCACCTTCATTTTAGGAATTACTTGTACTCTTTTGAATTTGAGCTTAAGCACAGAAGTTGGAGAGCTTCAGTCCACAGGTATCAGAGTGGCAAGACTCGATACGTACACTATCGTCAGACTGATTACCTTTTGGCAGATTCAGGTTGGCATTGTAGCTTTTGCTTCCGCCACATCTCTGACTTCATATTCAAAATGAAAGCTTACAGCCACACTGATAGAGTGAGGTTCTTGCATTATTTGAACCCTAGAAGAATACAAGATATCATTTGTGAAGGATCTGATTTATATGACATGCTTCCTGAGGAGTACACATTCAAGGATATCATTGGTAACATGGGACCTCTACCTCATTCTTACTCAGCCGTGCATCTTCCTGCGCATTTGCTGGATAATCCCGAGAAGTATAAGTATCTCTTGCCTGGGAACTGCAAAAGAGAAAGTGGCTAAGTTGTTACCACAAAGTTGGACGCATTTTCGT-ACATAGGAGGTGTTCATGTGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U574194" ref_strand="-" ref_description="SGN-U574194 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|157345389|emb|CAO14687.1| (e_value=3e-28) unnamed; ">
      <seq>gaagatgaaaaagaaggtgaatatgtggtttcaaaaatcttttaccaacagcagaagcaatctgtcaaggccaatgattgttgtgacaatgaggaagccagtgtgggagcgaatcaaactgggcctacaactcccaagacggttacacccaatccccctcgagatggagaaaccccttcctatgatgatattttagatgaatctttacccttctcacctgatcaggaagtggaagttgccaaagaaccagggcagccttctgatgctaaaattaagtgtgagatggagtactccacatgcttggctggagaatcacaagcagctgatgcaaatgatgttcataattctctgttgtgtgatgaacataatgattattcacttcttgatagttttggacccaatcttggcccttctgttgactacactcatagcacttgccatttaccagaagtgaatggtaacacaacctgtggaatttcagaattggataacttggaactggatagtcctccagacttccaacttgcagatttgccgtttggttctcaagagaatatctttagttggttggaccggctatagagatgatggcaatgagataatgctttatgcattctcggatggagaatatacttcaacaagattgtgttcttgaacagctacaggaatctttcttcaatttcagttttcgtggtttcaacaaatccttatcaaaaaatgctcattttcccaccattactacagcccccagaagaaaagaaaacagaaatattgctatatctaaaatgctggacgatatacaagttgaaggagttgttgcaagaacctactacaatataccaaggatcaacgtttgggagttggaactgttaccccttagcttattgaattggctcaaactttgatttaatgttctgatttctcttgtcaagactctcatatcccttctgttctattcagcatgttctgttttgacccccaaatacttcgggaagtttctcgtttgtgctagtttatattttacttgaagtgtggacaggattctattgctttcttatgcatctttcattgtctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="-" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="22255" stop="20319"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21955" g_stop="21731" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="225" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="21730" i_stop="21560" i_length="171">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21559" g_stop="21257" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="528" r_length="303" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21256" i_stop="21166" i_length="91">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21165" g_stop="20619" g_length="547"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="1075" r_length="547" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="-" ref_id="SGN-U574194" ref_strand="-">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1075</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U574194" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="21955" e_stop="21731"/>
          <exon e_start="21559" e_stop="21257"/>
          <exon e_start="21165" e_stop="20619"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGATGAAAAAGAAGGTGAATATGTGGTTTCAAAAATCTTTTACCAACAGCAGAAGCAATCTGTCAAGGCCAATGATTGTTGTGACAATGAGGAAGCCAGTGTGGGAGCGAATCAAACTGGGCCTACAACTCCCAAGACGGTTACACCCAATCCCCCTCGAGATGGAGAAACCCCTTCCTATGATGATATTTTAGATGAATCTTTACCCTTCTCACCTGATCAGGTAAAAACAATTGGATGATGCAGTTGCATCTTTGGCTGTTCTGTACATTATTTCTGTTTGCAAAATTGCATGTTTTCAACTCATGAATACATATTTCTCGTAGTTCTTTCTACCTATATGCATTTTTTTAACATAATTTTTTCGTACACTGATCTTTGTTTTGTTGTTTAGGAAGTGGAAGTTGCCAAAGAACCAGGGCAGCCTTCTGATGCTAAAATTAAGTGTGAGATGGAGTACTCCACATGCTTGGCTGGAGAATCACAAGCAGCTGATGCAAATGATGTTCATAATTCTCTGTTGTGTGATGAACATAATGATTATTCACTTCTTGATAGTTTTGGACCCAATCTTGGCCCTTCTGTTGACTACACTCATAGCACTTGCCATTTACCAGAAGTGAATGGTAACACAACCTGTGGAATTTCAGAATTGGATAACTTGGAACTGGATAGTCCTCCAGACTTCCAACTTGCAGTAAGTTTCCCATCCTTGTAGATGGTAATGTGTTTTTTGTTTTATATGTATAAGAATAGCATGTGTAGCTGATGATGTTGTGTTTTACCAGGATTTGCCGTTTGGTTCTCAAGAGAATATCTTTAGTTGGTTGGACCGGCTATAGAGATGATGGCAATGAGATAATGCTTTATGCATTCTCGGATGGAGAATATACTTCAACAAGATTGTGTTCTTGAACAGCTACAGGAATCTTTCTTCAATTTCAGTTTTCGTGGTTTCAACAAATCCTTATCAAAAAATGCTCATTTTCCCACCATTACTACAGCCCACAGAAGAAAAGAAAACAGAAATATTGCTATATCTAAAATGCTGGACGATATACAAGTTGAAGGAGTTGTTGCAAGAACCTACTACAATATACCAAGGATCAACGTTTGGGAGTTGGAACTGTTACACCTTAGCTTATTGAATTGGCTCAAACTTTGATTTAATGTTCTGATTTCTCTTGTCAAGACTCTCATATCCCTTCTGTTCTATTCAGCATGTTCTGTTCTGACCCCCAAATACTTCGGGAAGTTTCTCGTTTGTGCTAGTTTATATTTTACTTGAAGTGTGGACAGGATTCTATTGCTTTCTTATGCATCTTTCATTGTCTG</genome_strand>
        <mrna_strand>GAAGATGAAAAAGAAGGTGAATATGTGGTTTCAAAAATCTTTTACCAACAGCAGAAGCAATCTGTCAAGGCCAATGATTGTTGTGACAATGAGGAAGCCAGTGTGGGAGCGAATCAAACTGGGCCTACAACTCCCAAGACGGTTACACCCAATCCCCCTCGAGATGGAGAAACCCCTTCCTATGATGATATTTTAGATGAATCTTTACCCTTCTCACCTGATCAG...........................................................................................................................................................................GAAGTGGAAGTTGCCAAAGAACCAGGGCAGCCTTCTGATGCTAAAATTAAGTGTGAGATGGAGTACTCCACATGCTTGGCTGGAGAATCACAAGCAGCTGATGCAAATGATGTTCATAATTCTCTGTTGTGTGATGAACATAATGATTATTCACTTCTTGATAGTTTTGGACCCAATCTTGGCCCTTCTGTTGACTACACTCATAGCACTTGCCATTTACCAGAAGTGAATGGTAACACAACCTGTGGAATTTCAGAATTGGATAACTTGGAACTGGATAGTCCTCCAGACTTCCAACTTGCA...........................................................................................GATTTGCCGTTTGGTTCTCAAGAGAATATCTTTAGTTGGTTGGACCGGCTATAGAGATGATGGCAATGAGATAATGCTTTATGCATTCTCGGATGGAGAATATACTTCAACAAGATTGTGTTCTTGAACAGCTACAGGAATCTTTCTTCAATTTCAGTTTTCGTGGTTTCAACAAATCCTTATCAAAAAATGCTCATTTTCCCACCATTACTACAGCCCCCAGAAGAAAAGAAAACAGAAATATTGCTATATCTAAAATGCTGGACGATATACAAGTTGAAGGAGTTGTTGCAAGAACCTACTACAATATACCAAGGATCAACGTTTGGGAGTTGGAACTGTTACCCCTTAGCTTATTGAATTGGCTCAAACTTTGATTTAATGTTCTGATTTCTCTTGTCAAGACTCTCATATCCCTTCTGTTCTATTCAGCATGTTCTGTTTTGACCCCCAAATACTTCGGGAAGTTTCTCGTTTGTGCTAGTTTATATTTTACTTGAAGTGTGGACAGGATTCTATTGCTTTCTTATGCATCTTTCATTGTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586918" ref_strand="+" ref_description="SGN-U586918 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157345389|emb|CAO14687.1| (e_value=4e-86) unnamed; (*ATH) AT1G25580.1 (e_value=2e-61) | Symbol: ANAC008 | no apical meristem (NAM) family protein, contains Pfam PF02365: No apical meristem (NAM) domain; similar to putative NAM protein (GP:21554371) (Arabidopsis thaliana) | chr1:8996755-8999847 REVERSE | Aliases: F2J7.1, ANAC008; ">
      <seq>aaactcagattcaccgaattttcttcaaaaatcttgaaatttttttcgatcctttatgggaaggtcttggcttattaatggcagagggcttgcaagtaaagttaaaaatgccagtgcccctgctgctcatcaaatcaaagattgtggggcaaagcggcaatgcccaaactgcaactactctattgataacaaagatgtttctcatgaatgcctggtctacctgttggtgtgaaatttgatccatctgatgctgagctcgtggagcatttagaagcaaagtgtggggtgggaaattcagaacaacacaaattcattgatgagttcatcccgacccttgaggttcacgaaggaatttgctacacccatcctgaaaatcttcctggttcaaaaaaggatggaagtagcattcacttcttttatcgcattactaatgcatatgcaactggtaaacggaagcgtagaaggattcatgatgaaaataatttgatgaaagaacatgtccgctggcacaagactggaaagaccaaggttgttatggagaatggattccaaaagggatgcaagaaggtcatggttctctatcaaactcttaagaaggggtcgaagcaggaaaagactaattgggtaatgcatcantaccacctgggccctgatgaanatgaaaaanannnngaatatgtggtttcaaaaatcttttaccaacagcanaancaatctgtca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="-" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="24211" stop="21589"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23911" g_stop="23849" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23848" i_stop="23016" i_length="833">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23015" g_stop="22883" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="196" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22882" i_stop="22686" i_length="197">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22685" g_stop="22499" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="382" r_length="186" r_score="0.995"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="22498" i_stop="22228" i_length="271">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="22227" g_stop="21889" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="721" r_length="339" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="-" ref_id="SGN-U586918" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>722</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U586918" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23911" e_stop="23849"/>
          <exon e_start="23015" e_stop="22883"/>
          <exon e_start="22685" e_stop="22499"/>
          <exon e_start="22227" e_stop="21889"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACTCAGATTCACCGAATTTTCTTCAAAAATCTTGAAATTTTTTTCGATCCTTTATGGGAAGGTGAGGATTAATTTTTGTGATGAAACTTCAAAGTTTTGGTGTTCTTAGGCAAAAAAAAAGATTGATCTAGGTTTGATTGGGAATGATCAAAGATGATTTAAAAATTGAATCTTTAAACAATTATTCTGGAAAAAAATTCTATCTTTTCGGTAGCTTACGTTGTAAGATTTGTGTTTGCTACTGGGGATTATGCTGAATACTAGTGTAGTTTCTTAAGGATTTTGGGTTATCTGGGTTTAGATTTATTATTCGTTTTGGGGGCCATTGTGAATGGCGTTTGAGTTATTCTTCATCCGATTATTTAACGTATTTGAAAATGCTTATAGCATGTTCTGTGTTTACAATCGAAAATGTGAAATGTGTGCTTTAATTGGGTGATTGCTGGAAGTATCCATTAGTTCTAATTGCCCAAATTTTTTGATGGTCTCATGTTCTTGATCATCTGCCCAATATTGTCTAGGTTCAAAATTTGCTTGCAATGAATCATATCAAAACCTCATGTTGAAATTTGTCTATTTACCTGTTCAATATGTCAGTGTCATAGAAAGATTTGGGAAAGTTGGTCTCAGGTCTAAACTGATAGTGAAACCAGATGGATTATTGAATTTATCAAGAGTATTTACTGAACTTATAGTTAATTGTTATGTATTCTAGACGAATTACATTGGGTATGTTGTTCTGGTTGTTGTATTGTTAATTGTCAAGTATATTTCCTTTAGGCTTCAATCGAAGTTTTTGAATCTGTTGGAAGACATTGTTGTTCTTTTGTCAATTATATATGTCACCATAAGAAGATTTATAGTTCTAATCTGTTTCTTTTTTTATTGATCCAGGTCTTGGCTTATTAATGGCAGAGGGCTTGCAAGTAAAGTTAAAAATGCCAGTGCCCCTGCTGCTCATCAAATCAAAGATTGTGGGGCAAAGCGGCAATGCCCAAACTGCAACTACTCTATTGATAACAAAGATGTAAGCTAACAAGTGTTCATGCATAAGTTACTGACCTCTTGTAGTTTTCTTAACAGCTTCCTCAAACTGTTTTGTCTAGTTGAAAATTTCTCTTGTATAGAAAGTTCTTTTTTCCCCCGGTTCAAGATTAGGCCAACCAATAGTTGTAAATTAGCTGCTCAAAGCCTGCTTCAATATTCTACTGCTTTCTTATTCAGGTTTCTCATGAATGGCCTGGTCTACCTGTTGGTGTGAAATTTGATCCATCTGATGCTGAGCTCGTGGAGCATTTAGAAGCAAAGTGTGGGGTGGGAAATTCAGAACAACACAAATTCATTGATGAGTTCATCCCGACCCTTGAGGTTCACGAAGGAATTTGCTACACCCATCCTGAAAATCTTCCTGGTTTGTAGCACACCCAGTTCTTCAATAAACTAGTTAATGTTTGCTTTAACTGCATTAATCAAGTCAATAAGCTGTACTGGTGAAATAAATAGAGGGAAGGCTATCATCAGGAAAGGCTATTGTTGTTTTCAGGGTTGCATTTATCTAGAAATGAAAATGTAGCAAAAGTTAGTTGTTGTAAGGAGCATGTTTCCGTTTTTCTGGTTGAAACCGGACAACCATCTATATGTTGTGGCAGAATTTCATTCCTCAATCTCTTATTTTGCTTCAGGTTCAAAAAAGGATGGAAGTAGCATTCACTTCTTTTATCGCATTACTAATGCATATGCAACTGGTAAACGGAAGCGTAGAAAGATTCATGATGAAAATAATTTGATGAAAGAACATGTCCGCTGGCACAAGACTGGAAAGACCAAGGTTGTTATGGAGAATGGATTCCAAAAGGGATGCAAGAAGGTCATGGTTCTCTATCAAACTCTTAAGAAGGGGTCGAAGCAGGAAAAGACTAATTGGGTAATGCATCAGTACCACCTGGGCCCTGATGAAGATGAAAAAGAAGGTGAATATGTGGTTTCAAAAATCTTTTACCAACAGCAGAAGCAATCTGTCA</genome_strand>
        <mrna_strand>AAACTCAGATTCACCGAATTTTCTTCAAAAATCTTGAAATTTTTTTCGATCCTTTATGGGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTGGCTTATTAATGGCAGAGGGCTTGCAAGTAAAGTTAAAAATGCCAGTGCCCCTGCTGCTCATCAAATCAAAGATTGTGGGGCAAAGCGGCAATGCCCAAACTGCAACTACTCTATTGATAACAAAGAT.....................................................................................................................................................................................................GTTTCTCATGAAT-GCCTGGTCTACCTGTTGGTGTGAAATTTGATCCATCTGATGCTGAGCTCGTGGAGCATTTAGAAGCAAAGTGTGGGGTGGGAAATTCAGAACAACACAAATTCATTGATGAGTTCATCCCGACCCTTGAGGTTCACGAAGGAATTTGCTACACCCATCCTGAAAATCTTCCTG...............................................................................................................................................................................................................................................................................GTTCAAAAAAGGATGGAAGTAGCATTCACTTCTTTTATCGCATTACTAATGCATATGCAACTGGTAAACGGAAGCGTAGAAGGATTCATGATGAAAATAATTTGATGAAAGAACATGTCCGCTGGCACAAGACTGGAAAGACCAAGGTTGTTATGGAGAATGGATTCCAAAAGGGATGCAAGAAGGTCATGGTTCTCTATCAAACTCTTAAGAAGGGGTCGAAGCAGGAAAAGACTAATTGGGTAATGCATCANTACCACCTGGGCCCTGATGAANATGAAAAANANNNNGAATATGTGGTTTCAAAAATCTTTTACCAACAGCANAANCAATCTGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U568149" ref_strand="+" ref_description="SGN-U568149 Tomato 200607#2 [15 ESTs aligned] (*GB) gi|157345390|emb|CAO14688.1| (e_value=1e-175) unnamed; (*ATH) AT5G50180.1 (e_value=4e-156) | Symbol: None | protein kinase, putative, similar to protein kinase ATN1 (Arabidopsis thaliana) gi:1054633:emb:CAA63387 | chr5:20448164-20450326 FORWARD | Aliases: K6A12.4, K6A12_4; (*SWP) sp|Q2MHE4|HT1_ARATH (e_value=2e-54) Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1; ">
      <seq>cggccggggctcctaattgcttaacattcatctctatctttcattatctttcctcttattctactcactcttcaccttatttatctctcttttttcttctcctcctcctgatagcctcaattgatccaccaaccaaaccagctgatctacttcttctgaactttttatttttcaattgaaccagtaggaatttctggggtttcttgtttgtggggttcatttttctcttgttttaaacacaagggcatgttgtagatttgtttctggtttgtgggtctatgagttttctggttcttggtcataaagtcttgaactttttttgctgcttcaaatgctaggtgaattgttattaagtgtttcgaatttggtagttaaatagatgtgctactagttcattcttgaagttattatagggggagagtatttggggtctggaaaatgggatctgctaatgggttttactccggagaagaagagttcaatttggaggcgaaatggttaattgatccgaagcttctgttcgttggtcctaagattggagagggtgctcatgccaaagtgtatgagggaaaatacagaaaccagaatgtagcaataaagattgtgcataaaggggagacacctgaggagattgccaagagggaatctcgttttggaagggaggttgctatgttatccagagttcagcacaagaacttagtgaagttcataggagcttgcaaggagcctgtcatggtcatagtaactgaacttcttctcggggggacgctgaagaaatacttgctgaacctgaggccaaggtgcttggatactggtgttgctattagatttgcccttgatatagcccgtgcaatggagtgcttgcactctcatggtatcattcatcgcgacctaaaacctgagaacttgcttttgactgcggaccacaaaactgtcaaacttgcggattttggtttggcaagagaagaatcattgacagaaatgatgactgctgaaactggaacctatcgctggatggctccagagctctacagcacggtcactttaagacacggcgagaagaagcattataatcacaaagtagatgcctacagttttgcaatcgttctgtgggaactcgtacataacaaattaccatttgagggcatgtctaatttgcaggctgcttatgcagctgcttttaagaatgtgagaccaagtgcagatgatctccccgaggatttggcagtaattgtaacttcgtgttggaaagaggatccaaacactcgtcccaacttcactcagataatacagatgcttcttcattttctctcttcagtttcccctccggaaccagtaataccagctaggattttcacttcagagaatcatgtattaccaccggagtctccaggtaccagctccttaatgtccaagcgtgatgactcggttgagacccctaaaacacccatggagaatcagccaagaggtttcttcttctgttttaaccaatgctactgatccccaagggaaaagtttgttaattctctagaaaatactcggagttgagctatcttattatacaatagtaagctcacaaaatgtttagcccagatatgtcactagataacttagcttttggtctttcttccacataagataaaaaggtacacttttgagttttagccatggtaattcaaaggtgaaggacgttgttgcaggaacgtgttctgactaattgtgaggagttgggttgatgtgatgtatattatagttgtaaaaataaggtccatccaaagacctgtactccaatattttaatcgttttgacgcattatatgaactcattaatgtaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="-" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="33345" stop="28650"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33053" g_stop="32481" g_length="573"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="572" r_length="572" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32480" i_stop="31967" i_length="514">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31966" g_stop="31834" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="573" r_stop="705" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31833" i_stop="31719" i_length="115">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31718" g_stop="31523" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="706" r_stop="901" r_length="196" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31522" i_stop="30468" i_length="1055">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30467" g_stop="30343" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="902" r_stop="1026" r_length="125" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="30342" i_stop="30242" i_length="101">
            <donor d_prob="0.905" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="30241" g_stop="30083" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="1027" r_stop="1185" r_length="159" r_score="0.981"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="30082" i_stop="29581" i_length="502">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="29580" g_stop="28950" g_length="631"/>
          <reference_exon_boundary r_type="cDNA" r_start="1186" r_stop="1797" r_length="612" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1833" polyA_stop="1846"/>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="-" ref_id="SGN-U568149" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>1817</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U568149" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33053" e_stop="32481"/>
          <exon e_start="31966" e_stop="31834"/>
          <exon e_start="31718" e_stop="31523"/>
          <exon e_start="30467" e_stop="30343"/>
          <exon e_start="30241" e_stop="30083"/>
          <exon e_start="29580" e_stop="28950"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACTAAAGTCTCCTAATTGCTTAACATTCATCTCTATCTTTCATTATCTTTCCTCTTATTCTACTCACTCTTCACCTTATTTATCTCTCTTTTTTCTTCTCCTCCTCCTGATAGCCTCAATTGATCCACCAACCAAACCAGCTGATCTACTTCTTCTGAACTTTTTATTTTTCAATTGAACCAGTAGGAATTTCTGGGGTTTCTTGTTTGTGGGGTTCATTTTTCTCTTGTTTTAAACACAAGGGCATGTTGTAGATTTGTTTCTGGTTTGTGGGTCTATGAGTTTTCTGGTTCTTGGTCATAAAGTCTTGAACTTTTTTTGCTGCTTCAAATGCTAGGTGAATTGTTATTAAGTGTTTCGAATTTGGTAGTTAAATAGATGTGCTACTAGTTCATTCTTGAAGTTATTATAGGGGGAGAGTATTTGGGGTCTGGAAAATGGGATCTGCTAATGGGTTTTACTCCGGAGAAGAAGAGTTCAATTTGGAGGCGAAATGGTTAATTGATCCGAAGCTTCTGTTCGTTGGTCCTAAGATTGGAGAGGGTGCTCATGCCAAAGTGTATGAGGGAAAGTAAGTTTACTTTCTCTGTTAGTAAAACTATGTATTTGACTGATCTGTAAGAGCCGGACTCAGTTTGTTGGATCACACTGGGTATGTTGTTGTTGTTGTACTGATTTGTAAGTGTTGTTTGGTTATTTGAACTTCTGAACTAATACGGCTAGATTCTGTAGGTAGGGCATTACTGTTTGATTTAATTCAGCTAGTTCAATGGTTTAATCTTAGGAAAATGTTTGAAGAACTGACAGTAAATAGTCGCTAAAGTTTCCGTTAGATTTATAGTATGTGTATAAGGGTGTATAATCAGAGTATAGTCTATGTATACTGCTCAAAAAATAAACAAGTGAATTCGACTGGCTATTTGTGAAAAAATCCGAAGTGTTTTGCTAAAAAGATATTGTTCTTGATTCTGAAGTTACGGTATTTAAAAGTATGTGCTAGTTTGTTAAATTAGTAAAGCCTAAATGTGTGTCTTGATGCAGCTTTGTGCTTCTTTAGTTATACTTTTTGGTTGGGTTCTTGTCAGATACAGAAACCAGAATGTAGCAATAAAGATTGTGCATAAAGGGGAGACACCTGAGGAGATTGCCAAGAGGGAATCTCGTTTTGGAAGGGAGGTTGCTATGTTATCCAGAGTTCAGCACAAGAACTTAGTGAAGGTTGTTTTTAAGTCCCAAACTTGTGTTTGGGTATGATCTATTTGATGAGTTGTTAAGACGGCTAAATGAATTGCTCACATTGGTTATTGGTTTTCATTTTATTTTTCATTTACAGTTCATAGGAGCTTGCAAGGAGCCTGTCATGGTCATAGTAACTGAACTTCTTCTCGGGGGGACGCTGAGGAAATACTTGCTGAACCTGAGGCCAAGGTGCTTGGATACTGGTGTCGCTATTAGATTTGCCCTTGATATAGCCCGTGCAATGGAGTGCTTGCACTCTCATGGTATCATTCATCGCGACCTAAAACCTGGTACTAATACGTCTCTTTCACTGGTTTTTTTTTATGTTACATATTTTTAAATTCAGACATTTCAACATCCATTTGATCTGGTCTGAAATCACCACTGATCTCTTAACCTTTATATGGTCTTGATCTCTAGTAAATGTGTTTCAATGGTCACATGCTTCAATATGGTACTAGAGCAGGCAAAGGTCCTGGGATGGAATCTCACCGTCGCCTTTTATTGAATAGAATTTTCACGTGCTCGCCCCATGAAAAAAGAATCAAGCTCGCACGTGAAGGGACGTGTTTAAAATATAATTGAAAAAATAAGTGTGTTCTCTCTATAACAACTTAAGCTTATAAATGAGACGGTCACACATCTCAATAGCCCCTGTATGGTAAAAACATTACTGGTTAAGTAATTTCATCTGGCATATGGTTCCAGATCACTGTTCCTATTATTGTCTGTGGGTTAGTAGAACAGATAAGTTAATAATTGATAGTACTCTAGAGATGCTCTCATTAGTGAAATCACATGGAACTAGATTCTTGACAATATTACCAGTACATGGTTGGTAGGAGCAGGTGAATACATAAGAAACTTTAACTGGAATAAATTCCCCTGAAAGTGCTGCAGAGTAGATGCTTACTCATCATCCTTTTTAATAAAGTGGTCGAGAAAATTGATTTTTTTTTCTTTTGTTTTCTTCTTTCAAGGTTAGAAAATTTTGAGCTCCTAAATAAAATGATAAGATCATTTTAGTTTCTACTACAAAATTGAGATGCATAACGATTTTTAGGTATTTTAATTTCTTTTTCTTGGATGAAGTTATGAGTTATATACAAAGGCATCAAGAAGATGCAAAATTACAGTTAATGTCAGCAATTATGATTGTTGTCTGCTTTGGCCTGGTAGTGTAACTTATACTTGTCAAGGTTTAGCAATGATTTCAAACTTTACAAGTCTTCTCTGCTAATCGAATGGTGTTGACAACATTTATGGATATTGTTATTCCTTTAAAAGTTACAAGGCTGTTAGTATCATTTTTTCTGATTTGGGTTCTGTTTGCATTTACTTCCAGAGAACTTGCTTTTGACTGCGGACCACAAAACTGTCAAACTTGCGGATTTTGGTTTGGCAAGAGAAGAATCATTGACAGAGATGATGACTGCTGAAACTGGAACCTATCGCTGGATGGCTCCAGAGGTTGATTCTTGAATTCCCGTGCTTATTAATATATTCTCCGTTCCCTTTCTCTTCTCCTATGGCTATATAGTGCTGACTTATCACTCTCCTTTTTGTGGCAGCTCTACAGCACGGTCACTTTAAGACACGGCGAGAAGAAGCATTATAATCATAAAGTAGATGCCTACAGTTTTGCGATCGTTCTGTGGGAACTCGTACATAACAAATTACCATTTGAGGGCATGTCTAATTTACAGGCTGCTTATGCAGCTGCTTTTAAGGTAAATATCTTCTCTCCATTGGTCTTTGTCATCTAGTTATTTCAATATCATAATTTTAATTTTCCTAAACTAAAAGGATGAGAGAGGTTAAGATGTGATAGCAATTAGTTGGTTCACATCACACTGCCTCCTTTACAAAGGGCACATCAAAGACTAAATTGGACCACTGGGACACTAGTACAACTTTGGCTGAATGCCCTTTAATTTACCAACGTTTTTTACACAGCTGAAAATAGTTGTTTTTGTCTCAAATCACCTAACTTTTGACTGAAGAACACAAATACGTGGATAATTACAATGCAGAAACTTGAGACCCAGGGATTTGGTCTAGCGGTAAGAGCGTGTGTAGCACATGATGTGGGGACGAAAGCCTATATTTAAGTGGAAAATGGTACGAGAAATAAAATAAAAAAGGAACTTGGGGTCCAGAAAGAAGTTTAGTATAACAATTAATATCTGTTTAGTTTCGCTAAACCAAGTTTATACCTTGTGTGTTTTTCAGAATGTGAGACCAAGTGCAGATGATCTCCCCGAGGATTTGGCAGTAATTGTAACTTCGTGTTGGAAAGAGGATCCAAACACTCGTCCCAACTTCACTCAGATAATACAGATGCTTCTTCATTTTCTCTCTTCAGTTTCCCCTCCGGAACCAGTAATACCAGCTAGGATTTTCACTTCAGAGAATCATGTATTACCACCGGAGTCTCCAGGTACCAGCTCGTTAATGTCCAAGCGTGATGACTCGGTTGAGACCCCTAAAACACCCATGGAGAATCAGCCAAGAGGTTTCTTCTTCTGTTTTAACCAATGCTACTGATCCCCAAGGGAAAAGTTTGTTAATTCTCTAGAAAATACTCGGAGTTGAGCTATCTTATTATACAATAGTAAGCTCACAAAATGTTTAGCCCAGATATGTCACTAGATAACTTAGCTTTTGGTCTTTCTTCCACATAAGATAAAAAGGTACACTTTTGAGTTTTAGCCATGGTAATTCAAAGGTGAAGGACGTTGTTGCAGGAAGATGCATGATCTAGACTCGCGTTCTGACTTAATTGTGAGGAGTTGGGTTGCTGTGATGTATATTATAGTTGTAAAAAATAAGGTCCATCCAAAGACCTGTACTCCTATATTTT</genome_strand>
        <mrna_strand>CGGC-CGGGGCTCCTAATTGCTTAACATTCATCTCTATCTTTCATTATCTTTCCTCTTATTCTACTCACTCTTCACCTTATTTATCTCTCTTTTTTCTTCTCCTCCTCCTGATAGCCTCAATTGATCCACCAACCAAACCAGCTGATCTACTTCTTCTGAACTTTTTATTTTTCAATTGAACCAGTAGGAATTTCTGGGGTTTCTTGTTTGTGGGGTTCATTTTTCTCTTGTTTTAAACACAAGGGCATGTTGTAGATTTGTTTCTGGTTTGTGGGTCTATGAGTTTTCTGGTTCTTGGTCATAAAGTCTTGAACTTTTTTTGCTGCTTCAAATGCTAGGTGAATTGTTATTAAGTGTTTCGAATTTGGTAGTTAAATAGATGTGCTACTAGTTCATTCTTGAAGTTATTATAGGGGGAGAGTATTTGGGGTCTGGAAAATGGGATCTGCTAATGGGTTTTACTCCGGAGAAGAAGAGTTCAATTTGGAGGCGAAATGGTTAATTGATCCGAAGCTTCTGTTCGTTGGTCCTAAGATTGGAGAGGGTGCTCATGCCAAAGTGTATGAGGGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGAAACCAGAATGTAGCAATAAAGATTGTGCATAAAGGGGAGACACCTGAGGAGATTGCCAAGAGGGAATCTCGTTTTGGAAGGGAGGTTGCTATGTTATCCAGAGTTCAGCACAAGAACTTAGTGAAG...................................................................................................................TTCATAGGAGCTTGCAAGGAGCCTGTCATGGTCATAGTAACTGAACTTCTTCTCGGGGGGACGCTGAAGAAATACTTGCTGAACCTGAGGCCAAGGTGCTTGGATACTGGTGTTGCTATTAGATTTGCCCTTGATATAGCCCGTGCAATGGAGTGCTTGCACTCTCATGGTATCATTCATCGCGACCTAAAACCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACTTGCTTTTGACTGCGGACCACAAAACTGTCAAACTTGCGGATTTTGGTTTGGCAAGAGAAGAATCATTGACAGAAATGATGACTGCTGAAACTGGAACCTATCGCTGGATGGCTCCAGAG.....................................................................................................CTCTACAGCACGGTCACTTTAAGACACGGCGAGAAGAAGCATTATAATCACAAAGTAGATGCCTACAGTTTTGCAATCGTTCTGTGGGAACTCGTACATAACAAATTACCATTTGAGGGCATGTCTAATTTGCAGGCTGCTTATGCAGCTGCTTTTAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGAGACCAAGTGCAGATGATCTCCCCGAGGATTTGGCAGTAATTGTAACTTCGTGTTGGAAAGAGGATCCAAACACTCGTCCCAACTTCACTCAGATAATACAGATGCTTCTTCATTTTCTCTCTTCAGTTTCCCCTCCGGAACCAGTAATACCAGCTAGGATTTTCACTTCAGAGAATCATGTATTACCACCGGAGTCTCCAGGTACCAGCTCCTTAATGTCCAAGCGTGATGACTCGGTTGAGACCCCTAAAACACCCATGGAGAATCAGCCAAGAGGTTTCTTCTTCTGTTTTAACCAATGCTACTGATCCCCAAGGGAAAAGTTTGTTAATTCTCTAGAAAATACTCGGAGTTGAGCTATCTTATTATACAATAGTAAGCTCACAAAATGTTTAGCCCAGATATGTCACTAGATAACTTAGCTTTTGGTCTTTCTTCCACATAAGATAAAAAGGTACACTTTTGAGTTTTAGCCATGGTAATTCAAAGGTGAAGGACGTTGTTGC----AG--G-A--A-C--G--T---GTTCTGAC-TAATTGTGAGGAGTTGGGTTGATGTGATGTATATTATAGTTGT-AAAAATAAGGTCCATCCAAAGACCTGTACTCCAATATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U599584" ref_strand="+" ref_description="SGN-U599584 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ggctccgtcgattttgccgccgggatgtattcaaccgcccgccgtactaccctagttgactataatcaacgtcattcgccgtcgacgatctccaaatcgtcgttgcaactaattcacttgcgtagaattgtttctatttctcttttcgctaaaaataatcaccttcccaatagatgccggcgaatgcgtaccatatccggcagacatttatcttctcattcatcggattcttcaagcgactatgaaaacccgttaagttgtgattcaactcacattgactctgtactgcggccaggtaatctgctgtccaaaagtgttacatggattggtgttgccactattactagcaaagttctggtgattatttcctaatatgtttttaaatgggttattgagggaaattgttatagcttcagcttttggcattggtcctgtagtaactgccttcaggtatgcttcggtgctgcctggttttgctgcatcagttcttggtggtgttaatggccctattcacatcacaatgacaactacattaaggctagttgctatctctgtatgctactatcttgaatcctaaagatgaattcagagtgttctgcactttaactgctacagaattattttttaccaggagccaaaggcaccatattcctgttgtcgccatattcatctaaagaagcttgcnatacttgaatttatgtgtctctacatgtgataacccagnattctttgngcacagtaccatnanatgacaaatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="+" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="37001" stop="38994"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37301" g_stop="37595" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="295" r_length="295" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37596" i_stop="37670" i_length="75">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="37671" g_stop="37760" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="385" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37761" i_stop="37836" i_length="76">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="37837" g_stop="37901" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="450" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="37902" i_stop="38071" i_length="170">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="38072" g_stop="38115" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="494" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="38116" i_stop="38430" i_length="315">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.839" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="38431" g_stop="38694" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="495" r_stop="759" r_length="265" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="+" ref_id="SGN-U599584" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>758</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U599584" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37301" e_stop="37595"/>
          <exon e_start="37671" e_stop="37760"/>
          <exon e_start="37837" e_stop="37901"/>
          <exon e_start="38072" e_stop="38115"/>
          <exon e_start="38431" e_stop="38694"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTCCGTCGATTTTGCCGCCGGGATGTATTCAACCGCCCGCCGTACTACCCTAGTTGACTATAATCAACGTCATTCGCCGTCGACGATCTCCAAATCGTCGTTGCAACTAATTCACTTGCGTAGAATTGTTTCTATTTCTCTTTTCGCTAAAAATAATCACCTTCCCAATAGATGCCGGCGAATGCGTACCATATCCGGCAGACATTTATCTTCTCATTCATCGGATTCTTCAAGCGACTATGAAAACCCGTTAAGTTGTGATTCAACTCACATTGACTCTGTACTGCGGCCAGGTCCGTCATTTACAAACAATATCCATCTTTATACATTTGTATGTTAATCATTTATTCTTAGTTTGTCTCATGTAGGTAATCTGCTGTCCAAAAGTGTTACATGGATTGGTGTTGCCACTATTACTAGCAAAGTTCTGGTGATTATTTCCTAATATGTTTTTAAATGTACTTACTGTTAAACCTTTAAATTCTTCTCTCAATATTTTTGTTGTTTTCGGTAAACCAATTTTTGGTTATTTAGGGGTTATTGAGGGAAATTGTTATAGCTTCAGCTTTTGGCATTGGTCCTGTAGTAACTGCCTTCAGGTATGCCGTTTACCTGACTTGGAAATTTTTTCACCTTCCCCATTCTTTTCTAAGAGAACAAGAGAGTGTTCTATGTTTCCTAAAAAGTTTCTTACTTGTCAAACTTCAAGATATTTAGTTGTTACTCTCCTCACCATTTTAGTCTTAATCGAGTGGTGCTGTAATTACAGGTATGCTTCGGTGCTGCCTGGTTTTGCTGCATCAGTTCTTGGTGGTGAGTAGAGGATAAAATAAAGTAGATGGTTTATCTGTCCATAAGAGTATTGAGATACAAAACATAATAGCATTGTCTTTAGAGTTGGGTTCACTTTGTTTGTGTATGCATGATTATTTTTTTTTCTCTTTAGTCAAAACATGGGTGTAAGTAACAGCCATCTTTTTCTATAAGCAGTGTGTTGTTACCAGCTGCAGACAATATATTTCTAAGGAAATAGGCAACTCATATATAAGAAGTTTGTTAGTTCACAAAATGTTTTATGTGTGGGAGATGATAAGAACATTTTGATCACTGTCTCCTTACTTCACGCAGGTGTTAATGGCCCTATTCACATCACAATGACAACTACATTAAGGCTAGTTGCTATCTCTGTATGCTACTATCTTGAATCCTAAAGATGAATTCAGAGTGTTCTGCACTTTAACTGCTACAGAATTA-TTTTTACCAGGAGCCAAAGGCACCATATTCCTGTTGTCGCCATATTCATCTAAAGAAGCTTGCGATACTTGAATTTATGTGTCTCTACATGTGATAACCCAGGATTCTTTGTGCACAGTACCATAACATGACAAATTA</genome_strand>
        <mrna_strand>GGCTCCGTCGATTTTGCCGCCGGGATGTATTCAACCGCCCGCCGTACTACCCTAGTTGACTATAATCAACGTCATTCGCCGTCGACGATCTCCAAATCGTCGTTGCAACTAATTCACTTGCGTAGAATTGTTTCTATTTCTCTTTTCGCTAAAAATAATCACCTTCCCAATAGATGCCGGCGAATGCGTACCATATCCGGCAGACATTTATCTTCTCATTCATCGGATTCTTCAAGCGACTATGAAAACCCGTTAAGTTGTGATTCAACTCACATTGACTCTGTACTGCGGCCAG...........................................................................GTAATCTGCTGTCCAAAAGTGTTACATGGATTGGTGTTGCCACTATTACTAGCAAAGTTCTGGTGATTATTTCCTAATATGTTTTTAAAT............................................................................GGGTTATTGAGGGAAATTGTTATAGCTTCAGCTTTTGGCATTGGTCCTGTAGTAACTGCCTTCAG..........................................................................................................................................................................GTATGCTTCGGTGCTGCCTGGTTTTGCTGCATCAGTTCTTGGTG...........................................................................................................................................................................................................................................................................................................................GTGTTAATGGCCCTATTCACATCACAATGACAACTACATTAAGGCTAGTTGCTATCTCTGTATGCTACTATCTTGAATCCTAAAGATGAATTCAGAGTGTTCTGCACTTTAACTGCTACAGAATTATTTTTTACCAGGAGCCAAAGGCACCATATTCCTGTTGTCGCCATATTCATCTAAAGAAGCTTGCNATACTTGAATTTATGTGTCTCTACATGTGATAACCCAGNATTCTTTGNGCACAGTACCATNANATGACAAATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U574923" ref_strand="+" ref_description="SGN-U574923 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|157345392|emb|CAO14690.1| (e_value=9e-19) unnamed; (*ATH) AT5G40530.1 (e_value=5e-19) | Symbol: None | expressed protein, contains Pfam profile PF05148: Protein of unknown function (DUF691) | chr5:16251741-16253484 FORWARD | Aliases: MNF13.4, MNF13_4; ">
      <seq>gacgggctgcaggcccacgcaattttttgaaagctatttgtgatcttgggtttactattgagtcaaaggatttctctaacaaaatgtttgtgttgttctacttaaagaaaaaggaaaaacagaattcagtagacaaagagattaattggcctgagctcaaggcatgtatttataaacggcgctgagcttggccataatatggtctaagattttactatagtccctgttcattctggagatgggtttaaacttgttgctagatctcactcattgtttcaaaccgtgctcccaaaaaagactgtccactgaagtgaggaatggacgctgttgtgtttcaaagaatgcgcttcacaatgattctaggagaaaagtagtctattctttgaatctcatctttgagaagtaggattagtatcggcattattgtagtatattggatttttgaaattgtagttattttaattgtttgaaaattataataactaaattaatatgatactgatgtatttatttgatgagattcaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="-" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="44828" stop="43545"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44529" g_stop="44462" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="0.926"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44461" i_stop="44387" i_length="75">
            <donor d_prob="0.867" d_score="1.00"/>
            <acceptor a_prob="0.821" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44386" g_stop="44342" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="113" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="44341" i_stop="44257" i_length="85">
            <donor d_prob="0.032" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44256" g_stop="43844" g_length="413"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="526" r_length="413" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="-" ref_id="SGN-U574923" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U574923" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44529" e_stop="44462"/>
          <exon e_start="44386" e_stop="44342"/>
          <exon e_start="44256" e_stop="43844"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGGGGTGCAGACCCAAGCAATTTTTTGAAAGCTATTTGTGATCTTGGGTTTACTATTGAGTCAAAGGTCTATTCCATTTCTTTTCGTTATGAGTTTGATGAAATCTACTACAATTTCTAAAGCTTGTCTATGTTTCTGCAGGATTTCTCTAACAAAATGTTTGTGTTGTTCTACTTAAAGAAAAAGGTTTGGTTTGATGGATAATTTAGTTTTATTCTTCTTCTGTGACTTGGGAAATATGTGCTGATTGTCTGTATCTCTCTCTCAACAGGAAAAACAGAATTCAGTAGACAAAGAGATTAATTGGCCTGAGCTCAAGGCATGTATTTATAAACGGCGCTGAGCTTGGCCATAATATGGTCTAAGATTTTACTATAGTCCCTGTTCATTCTGGAGATGGGTTTAAACTTGTTGCTAGATCTCACTCATTGTTTCAAACCGTGCTCCCAAAAAAGACTGTCCACTGAAGTGAGGAATGGACGCTGTTGTGTTTCAAAGAATGCGCTTCACAATGATTCTAGGAGAAAAGTAGTCTATTCTTTGAATCTCATCTTTGAGAAGTAGGATTAGTATCGGCATTATTGTAGTATATTGGATTTTTGAAATTGTAGTTATTTTAATTGTTTGAAAATTATAATAACTAAATTAATATGATACTGATGTATTTATTTGATGAGATTCAAT</genome_strand>
        <mrna_strand>GACGGGCTGCAGGCCCACGCAATTTTTTGAAAGCTATTTGTGATCTTGGGTTTACTATTGAGTCAAAG...........................................................................GATTTCTCTAACAAAATGTTTGTGTTGTTCTACTTAAAGAAAAAG.....................................................................................GAAAAACAGAATTCAGTAGACAAAGAGATTAATTGGCCTGAGCTCAAGGCATGTATTTATAAACGGCGCTGAGCTTGGCCATAATATGGTCTAAGATTTTACTATAGTCCCTGTTCATTCTGGAGATGGGTTTAAACTTGTTGCTAGATCTCACTCATTGTTTCAAACCGTGCTCCCAAAAAAGACTGTCCACTGAAGTGAGGAATGGACGCTGTTGTGTTTCAAAGAATGCGCTTCACAATGATTCTAGGAGAAAAGTAGTCTATTCTTTGAATCTCATCTTTGAGAAGTAGGATTAGTATCGGCATTATTGTAGTATATTGGATTTTTGAAATTGTAGTTATTTTAATTGTTTGAAAATTATAATAACTAAATTAATATGATACTGATGTATTTATTTGATGAGATTCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U574924" ref_strand="+" ref_description="SGN-U574924 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157345392|emb|CAO14690.1| (e_value=3e-88) unnamed; (*ATH) AT5G40530.2 (e_value=1e-80) |; (*SWP) sp|O43159|HUCE1_HUMAN (e_value=9e-45) Cerebral protein 1 OS=Homo sapiens GN=KIAA0409; ">
      <seq>gagttcgatgttccgttcccgttaggaactatccctaaactcaacagtaatagcaatagcagtagaagcagaagagagaatcatcagagaagaagatgaaagaagcaaagcgtagtcgtaaacggaagagaggaaaggttcataagaaatcttccactccggccggaaacgatccttctaaggtctccggcgtgaatcagtctatggtttcgaatacggcgatctcaaagactaagaaaccttcgtcttttctcgataagatgaaggcgagattatcaggaggacacttccgtatgcttaatgaaaaactctacacttgctcaggagatgaggcgcttaattatttcaaggaaaatccggaactttttaatgtgtatcatgcagggtatcaggagcaaatgttacattggccagaaaaacctgttaatataatcacaaaatggctaaaggatcatagcccttcattaattgttgcagactttggctgcggagatgctcggctggcaagaagtgtgaagaacaaagtgtggtctttggatcttgtcgcacatgatccttcagtaattgcttgtgacatgtcaaatacccctctagagtcctcgtcagttgatgtggccatcttttgcctttcattgatgggaaccgattatccaagctttcttcaggaagcgcgcagagttcttaaacccagggggtggcttttgatagcagaagttaaaagcaggcttgatccaactacagggggtgcagacccaagcaattttttgaaagctatttgtgatcttgggtttactattgagtca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="-" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="47075" stop="44165"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46775" g_stop="46516" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="260" r_length="260" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46515" i_stop="46431" i_length="85">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46430" g_stop="46369" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="322" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46368" i_stop="46276" i_length="93">
            <donor d_prob="0.845" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46275" g_stop="46224" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="374" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46223" i_stop="45197" i_length="1027">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45196" g_stop="45082" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="489" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45081" i_stop="44991" i_length="91">
            <donor d_prob="0.388" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44990" g_stop="44896" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="584" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="44895" i_stop="44772" i_length="124">
            <donor d_prob="0.692" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="44771" g_stop="44665" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="585" r_stop="691" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="44664" i_stop="44577" i_length="88">
            <donor d_prob="0.893" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="44576" g_stop="44465" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="692" r_stop="803" r_length="112" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="-" ref_id="SGN-U574924" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>803</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U574924" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46775" e_stop="46516"/>
          <exon e_start="46430" e_stop="46369"/>
          <exon e_start="46275" e_stop="46224"/>
          <exon e_start="45196" e_stop="45082"/>
          <exon e_start="44990" e_stop="44896"/>
          <exon e_start="44771" e_stop="44665"/>
          <exon e_start="44576" e_stop="44465"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTTCGATGTTCCGTTCCCGTTAGGAACTATCCCTAAACTCAACAGTAATAGCAATAGCAGTAGAAGCAGAAGAGAGAATCATCAGAGAAGAAGATGAAAGAAGCAAAGCGTAGTCGTAAACGGAAGAGAGGAAAGGTTCATAAGAAATCTTCCACTCCGGCCGGAAACGATCCTTCTAAGGTCTCCGGCGTGAATCAGTCTATGGTTTCGAATACGGCGATCTCAAAGACTAAGAAACCTTCGTCTTTTCTCGATAAGGTTCTAGTTGTATTTCTCCTTATATAATTATATGTATGTTCGTATTTTTACAAATAGATTTTTGATACTTGTGGAGTTTACGCAGATGAAGGCGAGATTATCAGGAGGACACTTCCGTATGCTTAATGAAAAACTCTACACTTGCTCGTATGTCTACCTTCTTCGCAAGTTGCTGCAATTTTTTCGCTGGATAATATGTTCAAATATTGATGCAATTGCTTTGCTTTTTTTGTTATCCAGAGGAGATGAGGCGCTTAATTATTTCAAGGAAAATCCGGAACTTTTTAATGTGGTAAGAATCATTTTCTCCAATATTTTGTACTTCTACTGATAACTCAAGTTTCTTAGATTTGAGGTTGCTGTAGACTGAACTTGATTGCAAGAGATTTAGTGGGGAAAAAACAAAACTTTTAGGTCCTGAAGCTGAAAACAAAGTAAAAATTATCAAGGTCTTCAGAGAGATAAATTGTCCTGTGCCGATATTAAGAGACTTGAAATTGAACATCAAGTGGGTGCTATGGTATTTCTAAAGGTTTCTCCGGGGAAGAAAATTATGAGATTTGGTCTGAAAGGAAAACTTTGTTCTTGATTTATTGGGCCTTATGAAGTACTTGATAGAGCTAGCCTGATTGCATATGTATTAGCCTTACTACTAAGATTTGATCCGTAATGAATGAGTAATAAGGGTTTTGCATTTGCTTGGTAAGGACTAAAAGAGGATGAGAAGTTAAACAAAGGATCATTGCACCCCCTCTGTCCAATATTACTTTGTTCAATAAGGAATCTTGGCCTCTTATAGTGACTATATTATTGGTATCTGACTGAACATGAATTTAAGATGTTAATTTTGACTTACATATTATGATAGTTATGGTTTAGAGAAAGTATCATATCAAAAATAAAAGTTTGGCATATTTAATGAAGTCATGAAAGTTGTATAGAAATGAAGGTGTTAATATTTCGAGAGGAGCTGTTCAGAAGACTAAGTTGTATGTAATCCCTCATAGGAACTGTTTGAAAGACCAAGTTTGTTATCAAGGATGGCTTCTTGGAGCTATTACTTCATTTTTCTCCCTGACCTCATGTTCTTAACGACAAACTAATCACTCCTAATAAGACTTTTACTGTCTTCCACAAATACCCCCGTGTGATGGCTGGTTTATAATATCCCCTTCTGAAGTTGTATGGACTGCAACTTCTGAGTCTGATTCAACTTCAGGTTTGCAATTTATGAAACATCCTGGAGTATTTCTTGAGTTCTTGTCAATATCCCTCACCATTTAGTATCTTCTTGTTCTTAACCATACTTAGCTGGTCAGTATCATGCAGGGTATCAGGAGCAAATGTTACATTGGCCAGAAAAACCTGTTAATATAATCACAAAATGGCTAAAGGATCATAGCCCTTCATTAATTGTTGCAGACTTTGGCTGCGGTATGGGTCTCAAATTATCAGGAAGCAACAAATTTCATGTGTTTATCACTTTTGCTGTTGTGTGACTCATTGATTGTCCAACTTATTGCAGGAGATGCTCGGCTGGCAAGAAGTGTGAAGAACAAAGTGTGGTCTTTGGATCTTGTCGCACATGATCCTTCAGTAATTGCTTGTGACATGTCAAATGTATGAGCTTCGCTTGGAGTCTTGCTTATAGAGTTTCTTGCTGTTTGAATTGCCTTTAAGTTTAGTATATTGAATACATACTGATTAGGAACTTTGTTTTAAATTAATGCTGCTCTTTTGGCAGACCCCTCTAGAGTCCTCGTCAGTTGATGTGGCCATCTTTTGCCTTTCATTGATGGGAACCGATTATCCAAGCTTTCTTCAGGAAGCGCGCAGAGTTCTTAAACCCAGGTTGGCATGCAGTACTTGCTTAAGTTGTAAGATACATATCTTCATCAGATAGCTTAGTTTATGAATCGAGTTGGATGGTTGTTTCCAGGGGGTGGCTTTTGATAGCAGAAGTTAAAAGCAGGCTTGATCCAACTACAGGGGGTGCAGACCCAAGCAATTTTTTGAAAGCTATTTGTGATCTTGGGTTTACTATTGAGTCA</genome_strand>
        <mrna_strand>GAGTTCGATGTTCCGTTCCCGTTAGGAACTATCCCTAAACTCAACAGTAATAGCAATAGCAGTAGAAGCAGAAGAGAGAATCATCAGAGAAGAAGATGAAAGAAGCAAAGCGTAGTCGTAAACGGAAGAGAGGAAAGGTTCATAAGAAATCTTCCACTCCGGCCGGAAACGATCCTTCTAAGGTCTCCGGCGTGAATCAGTCTATGGTTTCGAATACGGCGATCTCAAAGACTAAGAAACCTTCGTCTTTTCTCGATAAG.....................................................................................ATGAAGGCGAGATTATCAGGAGGACACTTCCGTATGCTTAATGAAAAACTCTACACTTGCTC.............................................................................................AGGAGATGAGGCGCTTAATTATTTCAAGGAAAATCCGGAACTTTTTAATGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCATGCAGGGTATCAGGAGCAAATGTTACATTGGCCAGAAAAACCTGTTAATATAATCACAAAATGGCTAAAGGATCATAGCCCTTCATTAATTGTTGCAGACTTTGGCTGCG...........................................................................................GAGATGCTCGGCTGGCAAGAAGTGTGAAGAACAAAGTGTGGTCTTTGGATCTTGTCGCACATGATCCTTCAGTAATTGCTTGTGACATGTCAAAT............................................................................................................................ACCCCTCTAGAGTCCTCGTCAGTTGATGTGGCCATCTTTTGCCTTTCATTGATGGGAACCGATTATCCAAGCTTTCTTCAGGAAGCGCGCAGAGTTCTTAAACCCAG........................................................................................GGGGTGGCTTTTGATAGCAGAAGTTAAAAGCAGGCTTGATCCAACTACAGGGGGTGCAGACCCAAGCAATTTTTTGAAAGCTATTTGTGATCTTGGGTTTACTATTGAGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567070" ref_strand="+" ref_description="SGN-U567070 Tomato 200607#2 [3 ESTs aligned] ">
      <seq>ttcttttagaattttagtaagttcttttataacacgttatcagcacgagtctctagctaattgagagtgagttttagttttttctttaactcatgttttggttgatctcgatatgagaatcaaggtattatttgcataagatcaggtatgtattttctaaaatattttatgatttagaataaaatagtattcagtcactagcaattatcaggaaccgaagacatatactactattggttgaatatgacatgctatataaaacttattaaatggaagaaggtataaaattttaatagcatgagtttgaatgttattttgattgttttgaaagactcaaagggtgagtcgtgttgtacttcggtctattataccgttggtcaagggtaagacgattgattcaagtttcatcgcaccaaaagggtaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="+" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="47647" stop="48650"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47947" g_stop="48350" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="425" r_length="401" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="+" ref_id="SGN-U567070" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>404</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567070" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47947" e_stop="48350"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTATAACACGTTATCAGCACGAGTCTCTAGCCAATTAAGATTGAGTTTTAG-TTTTTCTTTAACTCATGTTTTGGTTGATCTTGTTATGAGAATCAAGGTATTATTATATGCATAAAATCAGGTATGTATTTTCTAGAATATTTTTATGATTTAGAATAAAAATAGTATTCAGTCACTAACAATTATCACGAACCGAAGACATATACTATTATTGGTTGAATATGACATGCTATATAAAACTTCTTAAATTGAAGAA-GTGTAAAATTTTAATAGCATGAGTTTGAATGTTATTTTGATTATTTTGAAAGACTCAAAGGGTGAGTCATGTTGTACTTCGGTCTATTATACCGTTGGTTAAGGGTAAGACGATGGATTCAAGTTTCATCGCACCAAAAGGGTAAG</genome_strand>
        <mrna_strand>TTTTATAACACGTTATCAGCACGAGTCTCTAGCTAATTGAGAGTGAGTTTTAGTTTTTTCTTTAACTCATGTTTTGGTTGATCTCGATATGAGAATCAAGGTATTA-T-T-TGCATAAGATCAGGTATGTATTTTCTAAAATA-TTTTATGATTTAGAAT-AAAATAGTATTCAGTCACTAGCAATTATCAGGAACCGAAGACATATACTACTATTGGTTGAATATGACATGCTATATAAAACTTATTAAATGGAAGAAGGTATAAAATTTTAATAGCATGAGTTTGAATGTTATTTTGATTGTTTTGAAAGACTCAAAGGGTGAGTCGTGTTGTACTTCGGTCTATTATACCGTTGGTCAAGGGTAAGACGATTGATTCAAGTTTCATCGCACCAAAAGGGTAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586538" ref_strand="+" ref_description="SGN-U586538 Tomato 200607#2 [8 ESTs aligned] (*GB) gi|147777887|emb|CAN77974.1| (e_value=2e-37) hypothetical; ">
      <seq>cagagtttatgatacgccgaaagcgtaatagaccaattgattccaaatataaaattccttaaagaaggaaggagcaaatgatcaatatggtcatgataatgaggcaagtgctataaaggagcacattgacataacacttcataaaatcttgaaaaaggttcaggtacctgaaataatgaaaaaaattgaagagatctcgataagttatgtcttgttggaatcgatatcaaataaccgtcgacggtatctttgatataaggtagcgctcaatgaaataaaattgtgatgaggatcttgaattcaaatctgtcatatagtgtggacagattaatggttgaccaagtaaaatgcacaattcaagtatattttgtttcacttagaaaagtgacattttggactggtagtccataaatcaaggtataatgtcagtggggtacaaataaattattatgcaataatataaccgtaagatatcaaatacggtttgtgtcttggggcataaaggtttatcgcaaaaatcctgacattattggagatgttttctcctttggtggatgcaatgaggtttgttttgatctggcaacatatgaaaagcttgaatgcatgtaatgaataattgtaatgtctagctagacaatgaaggttatatgaaaatccttgaaacaatcgaggtgtctgaagcatacaagagtttgaaagaaactttttcaataaagcttcaagaatccttatatggattgaaatagtcaaggaagaaaagggtacaaaagaatgatcctaattgtccttgtatttttatgaaaaggtcttggtaagacaaaattttgtcttgacctacagattgttaatttgacaaataaaatatttgtctaacagtgcacatacactgaaaaattttgatgcaattttatgtggatatatcgcattcattgagtaccccaatgattatgagatcacttgtcataaatgatgattcagtttgatctcaaaagaaggatgatgagtttcttggtgatgaaactctatcttggtgcaatcagggcactagtgcatcttactaacaatactagaccagatatctgttttgcagtaagtctactggcaagattcagttcctccccaacaaaaagacattggaatggcgttaaacacatacttcgatatcttcgagggaccatggacatgggtttattctattccaatgaatccaaatcagaactgattggttacgcagatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="+" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="50341" stop="52174"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50641" g_stop="51874" g_length="1234"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1237" r_length="1237" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="+" ref_id="SGN-U586538" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>1234</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U586538" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50641" e_stop="51874"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAGCCTATGATACGCCGGAAGCGTAATAGACAAATTGATTCCAAATATAAAATTCCTTGAAGAAGGAAAGAGCAAATGATCAATATGTTCATGATAATGAGGCAAGTGCTATAAAGGAGCACATTGACATAACACTTCATAAAATCTTGAAAAAGGTTCAGGTACCTGAAATAATG--AAAAA-TGAAGAGATCTCGATAAGTTATGTCTTGTTGGAATCGATATCAAATAACCGCCGACGGTATCTTTGATATGAGGTAGCGCTCAATGATAT-AAATTATGATGAGGATCTTGAATTCAAATTTGTCATATAGTGTGAAGAGATAAATGGTTGGCCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCGATAATATAACCGTAAAATATCAAATACGGTTTGTGCCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGATATTAGTGGAGATGTTTTCTCCTTTGGTGGATGAAATGAGGTTTGTTTTGATCTGGCAACATATGAAAAACTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGAGAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATATAAGAGCTTGAAAGAAACTTTTTCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATGGTCAAGGAAGAAAAAGGGTACAAAAGAATGACCCTAATTGTCCTTGTATTTTTATGAAAAGGTTTTGGTAAGACAAAATTTTGTCTTGACCAACAGATTGATAATTTGACAAATGAAATATTTGTTTAACAGTGCACATACACTGAAAAGTTTTGATGCAATTTAATATGGATAAATCACATTCATTGAGTACCCCAATGATTATGAGATCACTTGACATAAATGATGATTCAGTTTGATCTCAAAAGAAGGATGAAGAGTTTCTTGGTGATGAAACTCTATCTTGGTGCAATCAGGGCACTAGTGCATCTTACTAACAATATTATTCCAGATATTTGTTTTGCAGTAAATTTACTGGCAAGATTCAGTTTCTCCCCGATAAAAGGACATTGAAATGGTGTTGAGCACATGATTGAATATCCTCAAAGGACCATAGTTATGGGTTTATTCTATTCCGAGGAATCCAACACAAAATTGATTGGTTACGCAAATG</genome_strand>
        <mrna_strand>CAGAGTTTATGATACGCCGAAAGCGTAATAGACCAATTGATTCCAAATATAAAATTCCTTAAAGAAGGAAGGAGCAAATGATCAATATGGTCATGATAATGAGGCAAGTGCTATAAAGGAGCACATTGACATAACACTTCATAAAATCTTGAAAAAGGTTCAGGTACCTGAAATAATGAAAAAAATTGAAGAGATCTCGATAAGTTATGTCTTGTTGGAATCGATATCAAATAACCGTCGACGGTATCTTTGATATAAGGTAGCGCTCAATGAAATAAAATTGTGATGAGGATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATTAATGGTTGACCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCAATAATATAACCGTAAGATATCAAATACGGTTTGTGTCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCAACATATGAAAAGCTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATACAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAG-AAAAGGGTACAAAAGAATGATCCTAATTGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGTTAATTTGACAAATAAAATATTTGTCTAACAGTGCACATACACTGAAAAATTTTGATGCAATTTTATGTGGATATATCGCATTCATTGAGTACCCCAATGATTATGAGATCACTTGTCATAAATGATGATTCAGTTTGATCTCAAAAGAAGGATGATGAGTTTCTTGGTGATGAAACTCTATCTTGGTGCAATCAGGGCACTAGTGCATCTTACTAACAATACTAGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGCGTTAAACACATACTTCGATATCTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U576646" ref_strand="+" ref_description="SGN-U576646 Tomato 200607#2 [17 ESTs aligned] (*GB) gi|707001|gb|AAB33256.1| (e_value=8e-157) Clostridium pasteurianum ferredoxin homolog [Solanum tuberosum]; (*ATH) AT3G27570.1 (e_value=8e-83) | Symbol: None | expressed protein | chr3:10215233-10217973 REVERSE | Aliases: MMJ24.12; (*SWP) sp|P38281|APD1_YEAST (e_value=7e-14) Actin patches distal protein 1 OS=Saccharomyces cerevisiae GN=APD1; ">
      <seq>attatcatttcttcgaagtcagtggcgggtgtgccttgttaggcttcccatgcctttaaatcattctctctcctcttcaatcacattttgcttgcacttctctccaaaacctttcactcgcttttctgcacgagccctagttaacgccatggccggaacaccggagaacttctccaccgacgctactgccgacgctgccaacgccgacgaggacgtcaagtttgggtttcagcgttcggagatgtaccagagtaaacttgcaggtactacgacctcctatgatcgtcatctgttcctctgttacaagtctcacgagacttggcctgctcgccttgaagcttctgactccgatctgcttccaaagtcactctctgctgctcttaaagctcgcaaggatgacatcaaaatcaagactcttttgacaatatgcgaagtacgtgatgacatggaagtatcagaaggagatattctgatttttcctgaaatgatcaaatacagggatttgaaggagtcagatgtggatgcatttgttgatgatgtgcttgtcaatggcaatacttggagctctggattgcaggagtcgctgagtggttcttatgtgtttgtctgtgcccacaatcttcgtgatcgaagatgtggtgtttgtggacctattctaattgaggaatttagcaagctcattgagtccaagagcttgaaagacaaagttcgtgtgacagcttgttctcatattggtggccacaagtatgctggtaatgttataatcttcagctcaggaaaggacgggaatattgttggccactggtatggctatgttacgccaagtgatgtacctgctttgcttgatgagcatattggagagggaaaagtcattgaacgactttggaggggccaaatgggacaatatgagaaggtaactgataaagtggatgaacagaaggttcctgaagtaaccaatgaagaaaagaagtctcttgaaaatggaaaaagccaggagagtagtgtaactagtttcagctgttgccaaggtgctgcgggagtttcttgttgtagagatgcaagtgctgagcagaaagagaacaagaaagggcagggaacagtttcaaactggttcggcaaatgggagcagcgtgaaatactcgcagctgtaggtgtggttggagcagtggctgttgtcgctgtggcttatggcttttacaagaagtcacggtgaagcatgttaacttgggacaaactttgtgctcaagagttttcgggtatctaggttttgtagaaaggtaataatgttcgagataatctcggacactgaaaatgcatacatatttggtatatttagagaaaattaaatgcaatgtgtaattcgactatggagagcagctcctttgctcgttcccagtaagaactagaaggggtgataaatataaagtgccaactaagtgctacatgtagaatgatagtttttacttctcttgcttgggattgagggtgattttatgtgatgtgttatgggcagatttgcttttttcttcttgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="-" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="62122" stop="55178"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61822" g_stop="61411" g_length="412"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="412" r_length="412" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61410" i_stop="61177" i_length="234">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="61176" g_stop="61091" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="498" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="61090" i_stop="60755" i_length="336">
            <donor d_prob="0.915" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60754" g_stop="60449" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="499" r_stop="804" r_length="306" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60448" i_stop="59968" i_length="481">
            <donor d_prob="0.803" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="59967" g_stop="59884" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="805" r_stop="888" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="59883" i_stop="56124" i_length="3760">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="56123" g_stop="55478" g_length="646"/>
          <reference_exon_boundary r_type="cDNA" r_start="889" r_stop="1534" r_length="646" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="-" ref_id="SGN-U576646" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1534</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U576646" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61822" e_stop="61411"/>
          <exon e_start="61176" e_stop="61091"/>
          <exon e_start="60754" e_stop="60449"/>
          <exon e_start="59967" e_stop="59884"/>
          <exon e_start="56123" e_stop="55478"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTATCATTTCTTCGAAGTCAGTGGCGGGTGTGCCTTGTTAGGCTTCCCATGCCTTTAAATCATTCTCTCTCCTCTTCAATCACATTTTGCTTGCACTTCTCTCCAAAACCTTTCACTCGCTTTTCTGCACGAGCCCTAGTTAACGCCATGGCCGGAACACCGGAGAACTTCTCCACCGACGCTACTGCCGACGCTGCCAACGCCGACGAGGACGTCAAGTTTGGGTTTCAGCGTTCGGAGATGTACCAGAGTAAACTTGCAGGTACTACGACCTCCTATGATCGTCATCTGTTCCTCTGTTACAAGTCTCACGAGACTTGGCCTGCTCGCCTTGAAGCTTCTGACTCCGATCTGCTTCCAAAGTCACTCTCTGCTGCTCTTAAAGCTCGCAAGGATGACATCAAAATCAAGGTTAGGTTTTCTAAAACTGATTGTTTTTGTCAATAGGGGCTAGGAGAAACTTCATTGTTGTGATTACTGCGTCTTTATGTTCTAATGTCTAGAACGACTTAAAGGTAATATGTTGTCACTGGAATAATTTTCTGCTTATGTGATTATTTCTGGAGTGAATCCAACTGATTTGACATTTTGGTTTAGTTTATTGGTCGATATTGATTGATTTTTTCCGATGAGTGTTTGCTGTAGACTCTTTTGACAATATGCGAAGTACGTGATGACATGGAAGTATCAGAAGGAGATATTCTGATTTTTCCTGAAATGATCAAATACAGGTAGTTTATTTGTTCATTCATTTTTTCTAAAATTCGGCATTGAGCGGCACAAAGCTGATATTCCATGCATTGTGGGGGCTGACAAAATGACTCAATTTTAAACAAGAAAATGACAAATAAGATTCATGAATTTGACTTGATTCTATTAGCTGGATCCAAGTTTTCTGATATTTAGAAGAAAACGGTTTGTAGATACCACACTGAAGTCGCCTTTTAGTTTTCGTGCTTTCTCTTGGATAGCTTCAAAATGTCGATCTAAACGTGTATGCATTGTCGGATTCGTCCGGATCTGTTGAGTCTCGTGGTTTGCATTGAAGCCTTGTTTTTATGATGAAGGGATTTGAAGGAGTCAGATGTGGATGCATTTGTTGATGATGTGCTTGTCAATGGCAATACTTGGAGCTCTGGATTGCAGGAGTCGCTGAGTGGTTCTTATGTGTTTGTCTGTGCCCACAATCTTCGTGATCGAAGATGTGGTGTTTGTGGACCTATTCTAATTGAGGAATTTAGCAAGCTCATTGAGTCCAAGAGCTTGAAAGACAAAGTTCGTGTGACAGCTTGTTCTCATATTGGTGGCCACAAGTATGCTGGTAATGTTATAATCTTCAGCTCAGGAAAGGACGGGAATATTGTTGGCCACTGGTAAGTCATATTTTTCAACGGACGACCTGGAATTTCACCACTAGCCTCCAGATCAATTTGTAATCTAACAACGGTAGCATGATTGAAAATGTTATTTTCATGAAGATAAAGTTATTTTTAAAATCTCTTACCTTGCAAACTATTATATACTGATAAAGGAGATGGAAGGTGGGAGATGGGTCATGTGGGGTCGGTGGGTGATATTTTCAAGTGCCAAATATTGACTCCATTAGTTACATATTGGTTGAAGCAAGTGCAATAAAGTAAGAGTTGTGGTACATTAGAGGAATGGTCATTTTCTCCATTCAGTGCAAAACATTTTCGTTGTGAGAAGATGTTGAACAATTAAGCCTACCTAGAAAATGATTTTGCAAAGAAAAACACACATTGCAAGCAGCATATCAAAGATCAATAAAGAAACTTTGCCTTAAGACTGTCCATTACATACATGTTATATGTGCTCTATGTTGTGTTAGTGCAGGTATGGCTATGTTACGCCAAGTGATGTACCTGCTTTGCTTGATGAGCATATTGGAGAGGGAAAAGTCATTGAACGACTTTGGAGGTTTGTATTGATTGTCCTCTCCCTTTTTTTTCTTTGCATGCTTTAGTGCTGTTTTGCTTCATGGCACAGCTAAATCACGAGGAAGTATCTTAATGTTTTCCATGGTTTTAATTCTAGGTAGATGTATATATTACTCTTCAACTATGAGATTGTGCTCAACATACTCTATAACTGCAATTGTGCTTATTCCTATGCCATTTTTGTCTATCCTTTCATTTTGAGGGAGCAACAGTTGCTTCCTTTTCCTTACAGGTTTAGGATGGGAACATGTTACTTATTTAATTTACTATCACAGTATCACTCACTCCTCTTCTGTCACGACCCAAAAATGGACGTGATGGCACTTATCTTATCCCACCAAGACAAGTCAGCCTAAAACTCAACTTATTACAATAAAATGCGGAAAATTTACTATCGACTTATATTATACCCCAAAACCTGGTTGTCACGTGTACAGGCCTCTAAAGTATTACAATTGATTCAAAAGAAAACTCAAGTCTCAAATGAACTTGTTTCTAGAATAGAACAAGAACATAATTAAGGAGAAGAAAGTCTGCTGCAATGGAAATAGCTACCTGACAAATCTCCAAGAAGCCTCGGAAAAGAAGAGAATGACAAGTACAACAAAAATCTAGGCTCATAACCTACAAAAATTTGTAGAAGCAAGGGGTGAGTACCAAACCACACGGTACTCAGCAAGTAAACGTCTAAACACAAGCTAAGGGGATGAAATACGGGTACTCCTACCACCCCAATCGAACCTCCACAATTACAAACTACATAAAATCCAGTCTAACCTAACAGTTCATATTTACATAGCACGTAACTCTACAACAACACTTAGACAAATTACATATACATCCTCCACAACCACACTTTACCAAATTACATATCCTCAATAACAACACTTCAACAAATTATATATCCTCGATAAAAACACTTCAACAAATTGCATACCCTTAACAACAACAATTCAACAAATTACATATCCTCAATAACAAGCTCAGTATTCATCAATCACAAATTTCGCAGAAAGTCAATCACAAGATCAGCAAAACACAATATCAAGTTCACCAATGATAAGTATGTGTAATGCAATGTCAAGTATAATGATGCATGTCTGACTTATTGATACACACCCGCTGTCTCTCAGTCCGGGACCCATGGGGGACATATCTGTCCATGCATCTGTCGCGGCGTGCGACACGACCCTCGATAATAATAACCATCACGGCGCGCGATACGTCCCTCGAAATATAGTATCCATCGCGGCGCGCGATACGTCCCTCGAAATATAGTATCCATCGCGGCGCGCGATACGTCCCTCGAAATGGTACATCCTCTTTAAGTTCTCATTCTTTCTCAATGCACATAACACTTTTCACAATCATGTCATCAAAATAATGCAATGCCATGTTCATACAAAAATAAAGAGGATATCACTATTTTAATAACATTACACAATTCACAACAACATCAACAATGATTCAACAAGCCTTTCAAATCATTCTCCATTATCAACACATCACACACAACCCATTATTCACATTGCCTTTTATTACCCTTTTGTTTTCCTCATTAGAATTAATCAATGTGGACAAATCAACCCATCACCAAGTCCCATTACTCCCAAACATATAGCATAAGGAAATACATGCATTCCATACACTTAACAAGAGTTTAGAAATTCACTTGCCTCAATTTATCGAACAGTCACTCCGGGACTTTAGTCTTCCCCCTTTGTTGCACTTCCAAATAAAATTCAGTCTATTCAAATAATTAAACACTATAAGGTTTCGAAGTTAACAACACACATATTGCACGTGTCTATACTAAACCAAAAAAACTCACGCAAATTTATAATTAAGTTCTTAAGTTTCAAGATTAGGATTAAATTTTTAATTTCTTTTCAATATCATAAATCTTAAGACATTCACTTAATACCATATACCTAATACTTAATTATATATATTAATATATCAAAACTTAAATGATAATATGGAAACTATTAAAAGGATCTCAAATTGATCCGCTTCTAGGTTAAAGGGAAGCACTAGACTCACTCCACGGGAACTCGCTTTTCGGTTTGCTTCAGATTTGGCATTCATTCCCCTTCCCTTTCCTGATGCAATTCAAATTGACAAGTAGTAGTGACAGCATAATAAATGTCCGGAGGACAGAACAAAATCTTTAATTCCCGGGTTTCCTTAAATTTATATCACCCATATTTGAACACCAAAATAAAGATATTTCATGAAATACTTTTATACGGAAGGCTTCTTGCATGTCTATTTACCTCCCTTCCCAATAATTGTTTCATGATCATCAACAATTGGTCATAATTACTCAATGACTAAGGTGAAATTTATGCTAAATAACATATGCATACATGTACACAAAATTAAAATTAGTTTCACATAGTGGTGTAAATTATACACGTTTTAATCTAAAAATCTACTTCTAATTACATAAAAACTTAATAGAAAGGATGAAAATAATTACCTTGACGCCTTGAGATGAAAATATTGATTTTTCTCCTCCTTTTCCCTTTTCTTTTCTCCCTTTCTTTTCTTTTTTTCTCTGCCTTTTTTTTCTTTTTCAAATCGTTTTTTTTTTCCTCAAATAAGCCGTCATAGGCTTTTTATAAGTTTAGGACACTTTGCCCCTTTTCTTTTTATTTTATTTTATTTATTTAATTAATTAATTTCCTTTTCTTTCTTTTTTTCATTACTATTAGCAACAAAAAAAATCTTTTATTAAATCTAAAAATCGTGTCACTCATTCTTACAAGTCATATAAATTATTTATAAAATCTACTAAAAAGGTTAATATAAAAAATAATAGTTGAAATTTCTAAAACGACTAAGAGGGTCGTTACATCTTCCTACTAATTAAGTAACAAAAGGTTGTCTCTTATAAAATTAGGACAAAGAAATGGTTGTTAACGGTGCATAAGGGGGGTATCAGAGGATGATGGATCCCTTGTTATCTGGATCTGTGTTTGTTTGTCCCTCTAGTTATTTGGTTGGTGTTGGATGCCTATGCTTAGCATCAATTTTAAGACAGGTAGAGAGTTGATTTGTCTGTTGTTTAAAAAAATCTTCTTCACTTTTGCTATCTGATTATCTCATAGCGTGGCGAAGTTTGATTGCTTTCCATACTATTTGGTCTAGTGGTAAGGTGATCCTGCTCCCATTGCAGAAAAAACATACTTGGGTTTAAGAGTGTTATCAGTTGGAAATTCTGTGTGGAGATTTTTCCATTATTAATAAAATTATTTTCCTTTTAAAAAATCACATGGATGCTGTATGTTGAAAGTATTATATTATATATCCCATGTAATGGGCATAAATTTCAGAAACTCGGAGTTTATTCCTTTCTCCGCATCTCATCGTCTTTATTTGATCAGGAGGGAAACTTGTTAATCTTTAATTATTTGTCTCTTAGTAAGAATTCATTATGTTTAAACAGTCGACTAGTCCTTGATTGAGATAATATTTGGATCTGTCTCCATAATGGTTAGACTATTTCTATGAGTGCTTGGGGGAAGCCATACCCCTTTATTAGGATTAATTGCTTCAATGCGGTCACTATTTGCTAGATTTGATGCTTTGGTTGGCCTAAATCATGCTTCTTGATCTGTAAAATTTACGGATGGAGGAAACGTCTTCAGCACTGCTGCAAAAATTGATATGTTGCTTTTATTTTTTAAATTGCTGTTATCACAGATGTTTTACAACTCTACTCTGATCAATTGTAGGGGCCAAATGGGACAATATGAGAAGGTAACTGATAAAGTGGATGAACAGAAGGTTCCTGAAGTAACCAATGAAGAAAAGAAGTCTCTTGAAAATGGAAAAAGCCAGGAGAGTAGTGTAACTAGTTTCAGCTGTTGCCAAGGTGCTGCGGGAGTTTCTTGTTGTAGAGATGCAAGTGCTGAGCAGAAAGAGAACAAGAAAGGGCAGGGAACAGTTTCAAACTGGTTCGGCAAATGGGAGCAGCGTGAAATACTCGCAGCTGTAGGTGTGGTTGGAGCAGTGGCTGTTGTCGCTGTGGCTTATGGCTTTTACAAGAAGTCACGGTGAAGCATGTTAACTTGGGACAAACTTTGTGCTCAAGAGTTTTCGGGTATCTAGGTTTTGTAGAAAGGTAATAATGTTCGAGATAATCTCGGACACTGAAAATGCATACATATTTGGTATATTTAGAGAAAATTAAATGCAATGTGTAATTCGACTATGGAGAGCAGCTCCTTTGCTCGTTCCCAGTAAGAACTAGAAGGGGTGATAAATATAAAGTGCCAACTAAGTGCTACATGTAGAATGATAGTTTTTACTTCTCTTGCTTGGGATTGAGGGTGATTTTATGTGATGTGTTATGGGCAGATTTGCTTTTTTCTTCTTGTG</genome_strand>
        <mrna_strand>ATTATCATTTCTTCGAAGTCAGTGGCGGGTGTGCCTTGTTAGGCTTCCCATGCCTTTAAATCATTCTCTCTCCTCTTCAATCACATTTTGCTTGCACTTCTCTCCAAAACCTTTCACTCGCTTTTCTGCACGAGCCCTAGTTAACGCCATGGCCGGAACACCGGAGAACTTCTCCACCGACGCTACTGCCGACGCTGCCAACGCCGACGAGGACGTCAAGTTTGGGTTTCAGCGTTCGGAGATGTACCAGAGTAAACTTGCAGGTACTACGACCTCCTATGATCGTCATCTGTTCCTCTGTTACAAGTCTCACGAGACTTGGCCTGCTCGCCTTGAAGCTTCTGACTCCGATCTGCTTCCAAAGTCACTCTCTGCTGCTCTTAAAGCTCGCAAGGATGACATCAAAATCAAG..........................................................................................................................................................................................................................................ACTCTTTTGACAATATGCGAAGTACGTGATGACATGGAAGTATCAGAAGGAGATATTCTGATTTTTCCTGAAATGATCAAATACAG................................................................................................................................................................................................................................................................................................................................................GGATTTGAAGGAGTCAGATGTGGATGCATTTGTTGATGATGTGCTTGTCAATGGCAATACTTGGAGCTCTGGATTGCAGGAGTCGCTGAGTGGTTCTTATGTGTTTGTCTGTGCCCACAATCTTCGTGATCGAAGATGTGGTGTTTGTGGACCTATTCTAATTGAGGAATTTAGCAAGCTCATTGAGTCCAAGAGCTTGAAAGACAAAGTTCGTGTGACAGCTTGTTCTCATATTGGTGGCCACAAGTATGCTGGTAATGTTATAATCTTCAGCTCAGGAAAGGACGGGAATATTGTTGGCCACTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGGCTATGTTACGCCAAGTGATGTACCTGCTTTGCTTGATGAGCATATTGGAGAGGGAAAAGTCATTGAACGACTTTGGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCCAAATGGGACAATATGAGAAGGTAACTGATAAAGTGGATGAACAGAAGGTTCCTGAAGTAACCAATGAAGAAAAGAAGTCTCTTGAAAATGGAAAAAGCCAGGAGAGTAGTGTAACTAGTTTCAGCTGTTGCCAAGGTGCTGCGGGAGTTTCTTGTTGTAGAGATGCAAGTGCTGAGCAGAAAGAGAACAAGAAAGGGCAGGGAACAGTTTCAAACTGGTTCGGCAAATGGGAGCAGCGTGAAATACTCGCAGCTGTAGGTGTGGTTGGAGCAGTGGCTGTTGTCGCTGTGGCTTATGGCTTTTACAAGAAGTCACGGTGAAGCATGTTAACTTGGGACAAACTTTGTGCTCAAGAGTTTTCGGGTATCTAGGTTTTGTAGAAAGGTAATAATGTTCGAGATAATCTCGGACACTGAAAATGCATACATATTTGGTATATTTAGAGAAAATTAAATGCAATGTGTAATTCGACTATGGAGAGCAGCTCCTTTGCTCGTTCCCAGTAAGAACTAGAAGGGGTGATAAATATAAAGTGCCAACTAAGTGCTACATGTAGAATGATAGTTTTTACTTCTCTTGCTTGGGATTGAGGGTGATTTTATGTGATGTGTTATGGGCAGATTTGCTTTTTTCTTCTTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U587867" ref_strand="+" ref_description="SGN-U587867 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|707001|gb|AAB33256.1| (e_value=6e-81) Clostridium pasteurianum ferredoxin homolog [Solanum tuberosum]; (*ATH) AT3G27570.1 (e_value=5e-60) | Symbol: None | expressed protein | chr3:10215233-10217973 REVERSE | Aliases: MMJ24.12; ">
      <seq>acttgcacttctctccnaaacctttcactcgcttttctgcacgagccctagttaacgccatggccggaacaccggagaacttctccaccgacgctacagccgacgctgccaacgccgacgaggacgtcaagtttgggtttcagcgttcggagatgtaccagagtaaacttgcaggtactacgacctcctatgatcgtcatctgttcctctgttacaagtctcacgagacttggcctgctcgccttgaagcttctgactccgatctgcttccaaagtcactctctgctgctcttaaagctcgcaaggatgacatcaaaatcaaggagtcagatgtgggtgcatttgttgatgatgtgcttgtcaatggcaatacttggagctctggattgcaggagtcgctgagtggttcttatgtgtttgtctgtgcccacaatcttcgtgatcgaagatgtggtgtttgtggacctattctaattgaggaatttagcaagctcattgagtccaagagcttgaaagacaaagttcgtgtgacagcttgttctcatattggtggccacaagtatgctggtaatgttataatcttcagctcnngaaaggacgggaatattgttggccactggtatggctatgttacgccangtgatgtacctgctttgcttgatgagcatattggnnagggaaaagtcattgaacgactttggaggggccaaatggganatatgana</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="-" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="62032" stop="59583"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61733" g_stop="61411" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="323" r_length="323" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61410" i_stop="60745" i_length="666">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60744" g_stop="60449" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="619" r_length="296" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60448" i_stop="59968" i_length="481">
            <donor d_prob="0.803" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59967" g_stop="59884" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="620" r_stop="703" r_length="84" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="-" ref_id="SGN-U587867" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U587867" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61733" e_stop="61411"/>
          <exon e_start="60744" e_stop="60449"/>
          <exon e_start="59967" e_stop="59884"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTGCACTTCTCTCCAAAACCTTTCACTCGCTTTTCTGCACGAGCCCTAGTTAACGCCATGGCCGGAACACCGGAGAACTTCTCCACCGACGCTACTGCCGACGCTGCCAACGCCGACGAGGACGTCAAGTTTGGGTTTCAGCGTTCGGAGATGTACCAGAGTAAACTTGCAGGTACTACGACCTCCTATGATCGTCATCTGTTCCTCTGTTACAAGTCTCACGAGACTTGGCCTGCTCGCCTTGAAGCTTCTGACTCCGATCTGCTTCCAAAGTCACTCTCTGCTGCTCTTAAAGCTCGCAAGGATGACATCAAAATCAAGGTTAGGTTTTCTAAAACTGATTGTTTTTGTCAATAGGGGCTAGGAGAAACTTCATTGTTGTGATTACTGCGTCTTTATGTTCTAATGTCTAGAACGACTTAAAGGTAATATGTTGTCACTGGAATAATTTTCTGCTTATGTGATTATTTCTGGAGTGAATCCAACTGATTTGACATTTTGGTTTAGTTTATTGGTCGATATTGATTGATTTTTTCCGATGAGTGTTTGCTGTAGACTCTTTTGACAATATGCGAAGTACGTGATGACATGGAAGTATCAGAAGGAGATATTCTGATTTTTCCTGAAATGATCAAATACAGGTAGTTTATTTGTTCATTCATTTTTTCTAAAATTCGGCATTGAGCGGCACAAAGCTGATATTCCATGCATTGTGGGGGCTGACAAAATGACTCAATTTTAAACAAGAAAATGACAAATAAGATTCATGAATTTGACTTGATTCTATTAGCTGGATCCAAGTTTTCTGATATTTAGAAGAAAACGGTTTGTAGATACCACACTGAAGTCGCCTTTTAGTTTTCGTGCTTTCTCTTGGATAGCTTCAAAATGTCGATCTAAACGTGTATGCATTGTCGGATTCGTCCGGATCTGTTGAGTCTCGTGGTTTGCATTGAAGCCTTGTTTTTATGATGAAGGGATTTGAAGGAGTCAGATGTGGATGCATTTGTTGATGATGTGCTTGTCAATGGCAATACTTGGAGCTCTGGATTGCAGGAGTCGCTGAGTGGTTCTTATGTGTTTGTCTGTGCCCACAATCTTCGTGATCGAAGATGTGGTGTTTGTGGACCTATTCTAATTGAGGAATTTAGCAAGCTCATTGAGTCCAAGAGCTTGAAAGACAAAGTTCGTGTGACAGCTTGTTCTCATATTGGTGGCCACAAGTATGCTGGTAATGTTATAATCTTCAGCTCAGGAAAGGACGGGAATATTGTTGGCCACTGGTAAGTCATATTTTTCAACGGACGACCTGGAATTTCACCACTAGCCTCCAGATCAATTTGTAATCTAACAACGGTAGCATGATTGAAAATGTTATTTTCATGAAGATAAAGTTATTTTTAAAATCTCTTACCTTGCAAACTATTATATACTGATAAAGGAGATGGAAGGTGGGAGATGGGTCATGTGGGGTCGGTGGGTGATATTTTCAAGTGCCAAATATTGACTCCATTAGTTACATATTGGTTGAAGCAAGTGCAATAAAGTAAGAGTTGTGGTACATTAGAGGAATGGTCATTTTCTCCATTCAGTGCAAAACATTTTCGTTGTGAGAAGATGTTGAACAATTAAGCCTACCTAGAAAATGATTTTGCAAAGAAAAACACACATTGCAAGCAGCATATCAAAGATCAATAAAGAAACTTTGCCTTAAGACTGTCCATTACATACATGTTATATGTGCTCTATGTTGTGTTAGTGCAGGTATGGCTATGTTACGCCAAGTGATGTACCTGCTTTGCTTGATGAGCATATTGGAGAGGGAAAAGTCATTGAACGACTTTGGAG</genome_strand>
        <mrna_strand>ACTTGCACTTCTCTCCNAAACCTTTCACTCGCTTTTCTGCACGAGCCCTAGTTAACGCCATGGCCGGAACACCGGAGAACTTCTCCACCGACGCTACAGCCGACGCTGCCAACGCCGACGAGGACGTCAAGTTTGGGTTTCAGCGTTCGGAGATGTACCAGAGTAAACTTGCAGGTACTACGACCTCCTATGATCGTCATCTGTTCCTCTGTTACAAGTCTCACGAGACTTGGCCTGCTCGCCTTGAAGCTTCTGACTCCGATCTGCTTCCAAAGTCACTCTCTGCTGCTCTTAAAGCTCGCAAGGATGACATCAAAATCAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCAGATGTGGGTGCATTTGTTGATGATGTGCTTGTCAATGGCAATACTTGGAGCTCTGGATTGCAGGAGTCGCTGAGTGGTTCTTATGTGTTTGTCTGTGCCCACAATCTTCGTGATCGAAGATGTGGTGTTTGTGGACCTATTCTAATTGAGGAATTTAGCAAGCTCATTGAGTCCAAGAGCTTGAAAGACAAAGTTCGTGTGACAGCTTGTTCTCATATTGGTGGCCACAAGTATGCTGGTAATGTTATAATCTTCAGCTCNNGAAAGGACGGGAATATTGTTGGCCACTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGGCTATGTTACGCCANGTGATGTACCTGCTTTGCTTGATGAGCATATTGGNNAGGGAAAAGTCATTGAACGACTTTGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U576645" ref_strand="+" ref_description="SGN-U576645 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|1200257|emb|CAA62477.1| (e_value=2e-11) sucrase [Solanum tuberosum]; ">
      <seq>aaacctttcactcgcttttctgcacgagccctagttaacgccatggccggaacaccggagaacttctccaccgacgctactgccgacgctgccaacgccgacgaggacgtcaagtttgggtttcagcgttcggagatgtaccagagtaaacttgcaggtactacgacctcctatgatcgtcatctgttcctctgttacaagtctcacgagacttggcctgctcgccttgaagcttctgactccgatctgcttccaaagtcactctctgctgctcttaaagctcgcaaggatgacatcaaaatcaaggttaggttttctaaaactgattgtttttgtcaataggggctaggagaaacttcattgttgtgattactgcgtctttatgttctaatgtctagaacgacttaaaggtaatatgttgtcactggaataattttctgcttatgtgattatttctggagtgaatccaactgatttgacattttggtttagtttattggtcgatattgattgattttttccgatgagtgtttgctgtagactcttttgacaatatgcgaagtacgtgatgacatggaagtatcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="-" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="62016" stop="60831"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61716" g_stop="61131" g_length="586"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="586" r_length="586" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="-" ref_id="SGN-U576645" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U576645" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61716" e_stop="61131"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACCTTTCACTCGCTTTTCTGCACGAGCCCTAGTTAACGCCATGGCCGGAACACCGGAGAACTTCTCCACCGACGCTACTGCCGACGCTGCCAACGCCGACGAGGACGTCAAGTTTGGGTTTCAGCGTTCGGAGATGTACCAGAGTAAACTTGCAGGTACTACGACCTCCTATGATCGTCATCTGTTCCTCTGTTACAAGTCTCACGAGACTTGGCCTGCTCGCCTTGAAGCTTCTGACTCCGATCTGCTTCCAAAGTCACTCTCTGCTGCTCTTAAAGCTCGCAAGGATGACATCAAAATCAAGGTTAGGTTTTCTAAAACTGATTGTTTTTGTCAATAGGGGCTAGGAGAAACTTCATTGTTGTGATTACTGCGTCTTTATGTTCTAATGTCTAGAACGACTTAAAGGTAATATGTTGTCACTGGAATAATTTTCTGCTTATGTGATTATTTCTGGAGTGAATCCAACTGATTTGACATTTTGGTTTAGTTTATTGGTCGATATTGATTGATTTTTTCCGATGAGTGTTTGCTGTAGACTCTTTTGACAATATGCGAAGTACGTGATGACATGGAAGTATCAG</genome_strand>
        <mrna_strand>AAACCTTTCACTCGCTTTTCTGCACGAGCCCTAGTTAACGCCATGGCCGGAACACCGGAGAACTTCTCCACCGACGCTACTGCCGACGCTGCCAACGCCGACGAGGACGTCAAGTTTGGGTTTCAGCGTTCGGAGATGTACCAGAGTAAACTTGCAGGTACTACGACCTCCTATGATCGTCATCTGTTCCTCTGTTACAAGTCTCACGAGACTTGGCCTGCTCGCCTTGAAGCTTCTGACTCCGATCTGCTTCCAAAGTCACTCTCTGCTGCTCTTAAAGCTCGCAAGGATGACATCAAAATCAAGGTTAGGTTTTCTAAAACTGATTGTTTTTGTCAATAGGGGCTAGGAGAAACTTCATTGTTGTGATTACTGCGTCTTTATGTTCTAATGTCTAGAACGACTTAAAGGTAATATGTTGTCACTGGAATAATTTTCTGCTTATGTGATTATTTCTGGAGTGAATCCAACTGATTTGACATTTTGGTTTAGTTTATTGGTCGATATTGATTGATTTTTTCCGATGAGTGTTTGCTGTAGACTCTTTTGACAATATGCGAAGTACGTGATGACATGGAAGTATCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U564891" ref_strand="+" ref_description="SGN-U564891 Tomato 200607#2 [18 ESTs aligned] (*GB) gi|1200256|emb|CAA62476.1| (e_value=0) stpk1 protein kinase [Solanum tuberosum]; (*ATH) AT3G27580.1 (e_value=0) | Symbol: None | protein kinase, putative, similar to serine/threonine protein kinase (Arabidopsis thaliana) gi:217861:dbj:BAA01715 | chr3:10218908-10220721 REVERSE | Aliases: MMJ24.13; (*SWP) sp|P15792|KPK1_PHAVU (e_value=0) Protein kinase PVPK-1 OS=Phaseolus vulgaris; ">
      <seq>gattacaatataagcgtttacaaaaacaagaaaaggtgaagatgaaggagaaaacagagtaaaatatagaaagagaaagagagagaaaatcttatgtatcaatttcttgactaagctctattctatttcatttgtttgttgtgagttttgtttgattgattcatttactctgtttgtatccaaatataataattagtcactcactctttttattgttacgatcggatctgaaaaagggagaggacccagaaagaaaaaggtgcaaagctgttaccctttttaagtggaaagggtctcaataatcatggcacatcattcatttttctccatttgataatcagtgtttataccaaaaaattacaatggagtctcttgttgatggaatcagttccttgccgaacgttcacaattcattcgctgcggttgagtgcaatacatctttggcctccaagataagtcatcctcctttgatgaaacaatccgaaaacaaagaggcatctatctcatatccaatagcgatggaccttggttccaccgtagctcatactcaaactggatcagtgactggttcaaagcattttaaagcaaatgaagatactgtaaatcaatcagcagaaggttgttcaggagaacaggttttggctttggaaactgaatcatctatcaaggatttacatcatgtttcgaaaaatggtacttcaaacgatgatttgaatgcgactgccaaagactcaggaatcacctactgtcctagtcctcaaaacagtttttattctgctacacagtacacagaagccaaacaaagtttttccaacacagaagtcagtgaatgcgctagcagcactgtggacaagtctggtgaaagtggtgatgttagcaactcttgtgatcttgttgagagcagaaaaacaagcttctacagaggcagcacaggtagtgacgttagtgatgaaagcagctctagtagtttcaatagcacagtatataaaccacataaggcaaatgatacaaggtgggatgcaatacaagttattagagcccgtgagggaacattgggttttaaccactttagactgttgaagagattgggatgtggtgatataggaagtgtttttctagcagagttgattggcacaagatgtttctttgccatgaaagtgatggacaaggcagctctagaaagtcgcaagaaactcgtgagagctcaaacggaaagagagatactgcagtctctggatcatccctttctaccaacactgtattcgcactttgaaacagataaattttcgtgcttggtgatggaattctgccctggtggagatttgcatgcacttaggcaaaagcagccaggaaaattcttcccggagcatgctgccaggttttacgtggctgaagtccttcttgctctagagtacttgcacatgcttggaatcatttacagagaccttaaaccagagaatgttttggttcgagaagatggccatataatgctttctgattttgacctctccttgaggtgtgccgtgagcccaactctagttagatcttcaaattcaagcttagagtgcaagagctcatcatactgtgtccagcctgcttgtattgagccatcttgtgtcgtacagcctgcatgtatacaaccttcatgttttacaccacgttttctaagcaagaacaagaaagaaaagaagtccaaacaaaagacagaaacatataaccaagtgaaccagcctcttccagaactccttgctgaaccaacgagtgctcgatcaatgtcttttgtgggaacacatgagtacctagctccagaaattataaagggtgaaggacacggcagtgctgtagattggtggacatttgggatctttctctatgaactcttgtttggacaaactcctttcaaaggtgcaggcaacagggcaacattgtttaacgttgttggacagcccttgaaatttcctgaaacacctagtgttagttttgcagcaagggacttgataagaggcctacttgtgaaggagccacaacatcgccttgcatataggcgaggggctactgaaataaaacaacatcctttcttccagaatgtgaactgggcacttataagatgtaccagtcctccagatgtaccaaagccgtcctccatgacatatgatatgccccgaacaccaccagcaggaaaggcccccggacttgatgtgaagccttcaggtaattattttgagattgatttcttctgaagaattcttttccttggcagcaatgcccccattgccgttctacgaagagctcaacgttgaggaagacacagtttttgtgttcctttatgctaatgtaaagtgcatactctgttgaaatgcaagatgcataggaattagatggtgaaggccatttttctttgtataagtatgttgttgatattaatgaagaaggccttgatgtggctataaagctaggcattgctggatgtgatgttttaaaatttttcaattgaagaatcaaaagttgatgtgccataatccagtcatttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="-" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="66422" stop="62147"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66122" g_stop="65782" g_length="341"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="341" r_length="341" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65781" i_stop="65356" i_length="426">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.257" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65355" g_stop="64319" g_length="1037"/>
          <reference_exon_boundary r_type="cDNA" r_start="342" r_stop="1378" r_length="1037" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64318" i_stop="63603" i_length="716">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63602" g_stop="62441" g_length="1162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1379" r_stop="2541" r_length="1163" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="-" ref_id="SGN-U564891" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>2540</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U564891" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66122" e_stop="65782"/>
          <exon e_start="65355" e_stop="64319"/>
          <exon e_start="63602" e_stop="62441"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTACAATATAAGCGTTTACAAAAACAAGAAAAGGTGAAGATGAAGGAGAAAACAGAGTAAAATATAGAAAGAGAAAGAGAGAGAAAATCTTATGTATCAATTTCTTGACTAAGCTCTATTCTATTTCATTTGTTTGTTGTGAGTTTTGTTTGATTGATTCATTTACTCTGTTTGTATCCAAATATAATAATTAGTCACTCACTCTTTTTATTGTTACGATCGGATCTGAAAAAGGGAGAGGACCCAGAAAGAAAAAGGTGCAAAGCTGTTACCCTTTTTAAGTGGAAAGGGTCTCAATAATCATGGCACATCATTCATTTTTCTCCATTTGATAATCAGGTGATTTCAACAACCTATTACTCTCTCTGTCCACTTTTTTTTTTTTTGATTTATTTGTGGATATACATCTTTTCATTGATCCTTTTGGTGGAATTCTATGATCATTTAATTCTGTGATTTTACTGCAATTCTATGTAAAGTTTTGTAATCAATGCTACATTATGAGATGACCGAATCAATTTATGGTAAAATTATTCAAAATTTAGTTGAAAATTGTGAAATTTGAAAAAAAAAGTATTTAATTTTGTTTTCAAAATGGAAATTGGAGTTATATATGACCATGATATTGGTATTTTTCAAAAGTTGAATTTCGGATTTAAAGCCAAAAATGATCTCCAGAATTCAACTCCGGGAAAGAGTAAAAAGTATTCATGGTCAAACTGTTAAGTAGCTAATTTTTCTTCACTTTTAATTGTGTAATGACAGTGTTTATACCAAAAAATTACAATGGAGTCTCTTGTTGATGGAATCAGTTCCTTGCCGAACGTTCACAATTCATTCGCTGCGGTTGAGTGCAATACATCTTTGGCCTCCAAGATAAGTCATCCTCCTTTGATGAAACAATCCGAAAACAAAGAGGCATCTATCTCATATCCAATAGCGATGGACCTTGGTTCCACCGTAGCTCATACTCAAACTGGATCAGTGACTGGTTCAAAGCATTTTAAAGCAAATGAAGATACTGTAAATCAATCAGCAGAAGGTTGTTCAGGAGAACAGGTTTTGGCTTTGGAAACTGAATCATCTATCAAGGATTTACATCATGTTTCGAAAAATGGTACTTCAAACGATGATTTGAATGCGACTGCCAAAGACTCAGGAATCACCTACTGTCCTAGTCCTCAAAACAGTTTTTATTCTGCTACACAGTACACAGAAGCCAAACAAAGTTTTTCCAACACAGAAGTCAGTGAATGCGCTAGCAGCACTGTGGACAAGTCTGGTGAAAGTGGTGATGTTAGCAACTCTTGTGATCTTGTTGAGAGCAGAAAAACAAGCTTCTACAGAGGCAGCACAGGTAGTGACGTTAGTGATGAAAGCAGCTCTAGTAGTTTCAATAGCACAGTATATAAACCACATAAGGCAAATGATACAAGGTGGGATGCAATACAAGTTATTAGAGCCCGTGAGGGAACATTGGGTTTTAACCACTTTAGACTGTTGAAGAGATTGGGATGTGGTGATATAGGAAGTGTTTTTCTAGCAGAGTTGATTGGCACAAGATGTTTCTTTGCCATGAAAGTGATGGACAAGGCAGCTCTAGAAAGTCGCAAGAAACTCGTGAGAGCTCAAACGGAAAGAGAGATACTGCAGTCTCTGGATCATCCCTTTCTACCAACACTGTATTCGCACTTTGAAACAGATAAATTTTCGTGCTTGGTGATGGAATTCTGCCCTGGTGGAGATTTGCATGCACTTAGGCAAAAGCAGCCAGGAAAATTCTTCCCGGAGCATGCTGCCAGGTTAGTGTTTGTCCGCATATCATATTCACCTCTTTGCTTTGTGTTCAAAATATCCAACTATCGCTGCGATCTTAATGAATAAAGAACTTTTAACATTGCTTCCTGTATAAACCAATCTGTTACCATCATCGTTATGCTTTAAGTGTCTTAAAAGTTCATAATAGTGGAAATGACTTTAATCTATTATGCAAGGAAGATCCTGTGCATATATGCCTTCTTCTAACTGTCTCACCTCTTTAGGCATTGCGCTCAAACAATGATGAGTGAGATCCACTGCTCTGTGCTTATAGCTGTTGACTTTTTTTCCCCAGCTGTTTATTAGATCCGTATCTGTATGTTTGCCTTGATATCTCTTCAATTAAACATGTTGCTTATTTCCTAGCCTTTTGTAATTTTTCTCAACATTGAGTTCAGACCTTTCTTGTTGTGTGCAGTCCCAGTAGCAAATATTGTTTTCCAGTTGCATGCTCGTATTCATCACTGTCATTTGGAAACTGACTGGTATAATGTTCTAAAATTTTGTTAGCTGGGGCCAAGGGAATTGAATATAACCGAGTAGTTTGTTTCGTAGGAACCAAAGATAAGTCCATTCAGATAGACTTGAGACGTTACATCTACCGTAATCAATGATAGTTTAGGTTGGAGTTACGTAGTTATGACTTATGATTGAGTTTTGTTATGATTTTTACTATTGATTCTTTTTATTGGGAATATAGGTTTTACGTGGCTGAAGTCCTTCTTGCTCTAGAGTACTTGCACATGCTTGGAATCATTTACAGAGACCTTAAACCAGAGAATGTTTTGGTTCGAGAAGATGGCCATATAATGCTTTCTGATTTTGACCTCTCCTTGAGGTGTGCCGTGAGCCCAACTCTAGTTAGATCTTCAAATTCAAGCTTAGAGTGCAAGAGCTCATCATACTGTGTCCAGCCTGCTTGTATTGAGCCATCTTGTGTCGTACAGCCTGCATGTATACAACCTTCATGTTTTACACCACGTTTTCTAAGCAAGAACAAGAAAGAAAAGAAGTCCAAACAAAAGACAGAAACATATAACCAAGTGAACCGGCCTCTTCCAGAACTCCTTGCTGAACCAACGAGTGCTCGATCAATGTCTTTTGTGGGAACACATGAGTACCTAGCTCCAGAAATTATAAAGGGTGAAGGACACGGCAGTGCTGTAGATTGGTGGACATTTGGGATCTTTCTCTATGAACTCTTGTTTGGACAAACTCCTTTCAAAGGTGCAGGCAACAGGGCAACATTGTTTAACGTTGTTGGACAGCCCTTGAAATTTCCTGAAACACCTAGTGTTAGTTTTGCAGCAAGGGACTTGATAAGAGGCCTACTTGTGAAGGAGCCACAACATCGCCTTGCATATAGGCGAGGGGCTACTGAAATAAAACAACATCCTTTCTTCCAGAATGTGAACTGGGCACTTATAAGATGTACCAGTCCTCCAGATGTACCAAAGCCGTCCTCCATGACATATGATATGCCCCGAACACCACCAGCAGGAAAGGCCCCCGGACTTGATGTGAAGCCTTCAGGTAATTATTTTGAGATTGATTTCTTCTGAAGAATTCTTTTCCTTGGCAGCAATGCCCCCATTGCCGTTCTACGAAGAGCTCAACGTTGAGGAAGACACAGTTTTTGTGTTCCTTTATGCTAATGTAAAGTGCATACTCTGTTGAAATGCAAGATGCATAGGAATTAGATGGTGAAGGCCATTTTTCTTTGTATAAGTATGTTGTTGATATTAATGAAGAAGGCCTTGATGTGGCTATAAAGCTAGGCATTGCTGGATGTGATGTTTTAAAA-TTTTCAATTGAAGAATCAAAAGTTGATGTGCCATAATCCAGTCATTTAAAAAGTTGAT</genome_strand>
        <mrna_strand>GATTACAATATAAGCGTTTACAAAAACAAGAAAAGGTGAAGATGAAGGAGAAAACAGAGTAAAATATAGAAAGAGAAAGAGAGAGAAAATCTTATGTATCAATTTCTTGACTAAGCTCTATTCTATTTCATTTGTTTGTTGTGAGTTTTGTTTGATTGATTCATTTACTCTGTTTGTATCCAAATATAATAATTAGTCACTCACTCTTTTTATTGTTACGATCGGATCTGAAAAAGGGAGAGGACCCAGAAAGAAAAAGGTGCAAAGCTGTTACCCTTTTTAAGTGGAAAGGGTCTCAATAATCATGGCACATCATTCATTTTTCTCCATTTGATAATCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTATACCAAAAAATTACAATGGAGTCTCTTGTTGATGGAATCAGTTCCTTGCCGAACGTTCACAATTCATTCGCTGCGGTTGAGTGCAATACATCTTTGGCCTCCAAGATAAGTCATCCTCCTTTGATGAAACAATCCGAAAACAAAGAGGCATCTATCTCATATCCAATAGCGATGGACCTTGGTTCCACCGTAGCTCATACTCAAACTGGATCAGTGACTGGTTCAAAGCATTTTAAAGCAAATGAAGATACTGTAAATCAATCAGCAGAAGGTTGTTCAGGAGAACAGGTTTTGGCTTTGGAAACTGAATCATCTATCAAGGATTTACATCATGTTTCGAAAAATGGTACTTCAAACGATGATTTGAATGCGACTGCCAAAGACTCAGGAATCACCTACTGTCCTAGTCCTCAAAACAGTTTTTATTCTGCTACACAGTACACAGAAGCCAAACAAAGTTTTTCCAACACAGAAGTCAGTGAATGCGCTAGCAGCACTGTGGACAAGTCTGGTGAAAGTGGTGATGTTAGCAACTCTTGTGATCTTGTTGAGAGCAGAAAAACAAGCTTCTACAGAGGCAGCACAGGTAGTGACGTTAGTGATGAAAGCAGCTCTAGTAGTTTCAATAGCACAGTATATAAACCACATAAGGCAAATGATACAAGGTGGGATGCAATACAAGTTATTAGAGCCCGTGAGGGAACATTGGGTTTTAACCACTTTAGACTGTTGAAGAGATTGGGATGTGGTGATATAGGAAGTGTTTTTCTAGCAGAGTTGATTGGCACAAGATGTTTCTTTGCCATGAAAGTGATGGACAAGGCAGCTCTAGAAAGTCGCAAGAAACTCGTGAGAGCTCAAACGGAAAGAGAGATACTGCAGTCTCTGGATCATCCCTTTCTACCAACACTGTATTCGCACTTTGAAACAGATAAATTTTCGTGCTTGGTGATGGAATTCTGCCCTGGTGGAGATTTGCATGCACTTAGGCAAAAGCAGCCAGGAAAATTCTTCCCGGAGCATGCTGCCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTACGTGGCTGAAGTCCTTCTTGCTCTAGAGTACTTGCACATGCTTGGAATCATTTACAGAGACCTTAAACCAGAGAATGTTTTGGTTCGAGAAGATGGCCATATAATGCTTTCTGATTTTGACCTCTCCTTGAGGTGTGCCGTGAGCCCAACTCTAGTTAGATCTTCAAATTCAAGCTTAGAGTGCAAGAGCTCATCATACTGTGTCCAGCCTGCTTGTATTGAGCCATCTTGTGTCGTACAGCCTGCATGTATACAACCTTCATGTTTTACACCACGTTTTCTAAGCAAGAACAAGAAAGAAAAGAAGTCCAAACAAAAGACAGAAACATATAACCAAGTGAACCAGCCTCTTCCAGAACTCCTTGCTGAACCAACGAGTGCTCGATCAATGTCTTTTGTGGGAACACATGAGTACCTAGCTCCAGAAATTATAAAGGGTGAAGGACACGGCAGTGCTGTAGATTGGTGGACATTTGGGATCTTTCTCTATGAACTCTTGTTTGGACAAACTCCTTTCAAAGGTGCAGGCAACAGGGCAACATTGTTTAACGTTGTTGGACAGCCCTTGAAATTTCCTGAAACACCTAGTGTTAGTTTTGCAGCAAGGGACTTGATAAGAGGCCTACTTGTGAAGGAGCCACAACATCGCCTTGCATATAGGCGAGGGGCTACTGAAATAAAACAACATCCTTTCTTCCAGAATGTGAACTGGGCACTTATAAGATGTACCAGTCCTCCAGATGTACCAAAGCCGTCCTCCATGACATATGATATGCCCCGAACACCACCAGCAGGAAAGGCCCCCGGACTTGATGTGAAGCCTTCAGGTAATTATTTTGAGATTGATTTCTTCTGAAGAATTCTTTTCCTTGGCAGCAATGCCCCCATTGCCGTTCTACGAAGAGCTCAACGTTGAGGAAGACACAGTTTTTGTGTTCCTTTATGCTAATGTAAAGTGCATACTCTGTTGAAATGCAAGATGCATAGGAATTAGATGGTGAAGGCCATTTTTCTTTGTATAAGTATGTTGTTGATATTAATGAAGAAGGCCTTGATGTGGCTATAAAGCTAGGCATTGCTGGATGTGATGTTTTAAAATTTTTCAATTGAAGAATCAAAAGTTGATGTGCCATAATCCAGTCATTTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U603920" ref_strand="+" ref_description="SGN-U603920 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157345402|emb|CAO14700.1| (e_value=1e-36) unnamed; (*ATH) AT5G40500.1 (e_value=8e-35) | Symbol: None | expressed protein | chr5:16245062-16245839 FORWARD | Aliases: MNF13.2, MNF13_2; ">
      <seq>ggaaatggctctggtttctaacactaactcattcttaaagtcacagaggcaccaagtttactgcagaaagaaggagaaagataagagtcaaaatccccaaccctataaagtcattgaaatttcaccccctcccaagaaccttggcatacgttgcctcccctcgaacttgcagtgtggagaaagtgtaaccatcgaaggccgagcttacaccatttcagctgtaactcatcgttatcagcttcgtaaagggaaatacgagcctagtgagaagaggcttgatgtgttgtctactggaagatacatcttaaatttgtacttagaaaatttgctagaacaatcttgactatgatgtagattactccacttttcccttcatctttatgtatacattatgaaaatacaacttcattcaattgccctgtgtcaaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="-" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="73747" stop="68862"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73447" g_stop="73408" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="40" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73407" i_stop="73324" i_length="84">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.936" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73323" g_stop="73201" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="163" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73200" i_stop="69428" i_length="3773">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="69427" g_stop="69162" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="430" r_length="267" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="-" ref_id="SGN-U603920" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U603920" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73447" e_stop="73408"/>
          <exon e_start="73323" e_stop="73201"/>
          <exon e_start="69427" e_stop="69162"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAATGGCTCTGGTTTCTAACACTAACTCATTCTTAAAGGTACGAATAGAACTCTGCAATCTCCCTCTTTTTGTTGTTGTTAAGCGTGTGAGTGGGTTTTTGATACTATTAGTAAAATTGCAGTCACAGAGGCACCAAGTTTACTGCAGAAAGAAGGAGAAAGATAAGAGTCAAAATCCCCAACCCTATAAAGTCATTGAAATTTCACCCCCTCCCAAGAACCTTGGCATACGTTGCCTCCCCTCGGTAAGCATCATTTTGTTTTTGTGTTTCTGTTTGATATATAATGCTTATGTGTCTCGAATGCTCAGTTGATTGATTGATTAATTGGTGTTATGATTATTATGTTTACGCTGATGCTCCTTTTCTTGCAATCGCTGTTTTTTTAATTGTTTGAATATACTTAAAAAGCCAAATGCCCCATTTGTGAGTTGTGAGATTATACACGGTATGTTGTTGTTGTAGTTGAAAGGCCATATACCATCTTACTTTTACTGGGAAGATTAGAAAAGAGCTTTCTTTACATTGGAATTATTGTAACTTGATTGGATTAGAAATGTGAAGAGTAATTCATTTGGGGTTTAATGTATTTTATGTTCAATATTGCTGGTTCCAATTCATTCTGTATGAAGTTTACAAACTTGGTTGATTGGCTTTTGTTGAATGTCTTACGTTTGTTTTATGGCATTCTTATGGTCACATTTTAGGATTAGTTCATGTTCCTTATACGTTTATATGGATGTTAACATCCTCAACTCCAAATTAGTTAGTGTCAGCTTTATGTACCCGTGAATACATTAGCTAAGAGAAGTGTCAACTACATGAATCCTCTATTTGGGTTGATTTCCTTGCAAATACCTGTACTGTGGTTGGAGCAAATATTGTGCTAGTGTCCCCACAGGATTTGGTTGGTTTGATCTAGACGGTAGTTGTTCCTCATAAGTCATAGCATATGAGCTACTCTAGAATTAAGGATAGTAGTTTGGGAACTCTTTGGTATTAACTGTGCTTGTAGTATTGCTTACAAAGAACCAAAACTAAGAGGGAACAATTTAAAGTGAATATCTGTTTTCTTGCTGGATGCTGAGTAATGGGTGAATTTCCATGCATGAGATAGAAAAAGGGCAGATGTTTGAAGGCACACAAGTTGGTTTCCTGTGATAGTGTCTCACATTCCATACCTGCTTGAATATAGACGCTGGTCTATTGATGGCAAATGGTTTTATGTGAGATGTGTTAGAATTAGATGGCTTCACATATGTTAGACCTGTATAAATGACTAAATGTGTCCAAAACTGCAGTTCTCTGTTATTTATTAATAAGTTGATTGTAACTTGGTCGAAGTCTGTGACTCCTACAACTTGCCAATACTAGACTTATGTATAAATCTCTTTTGAGTATTCTTTGTTTTGCATGAATTTCTGAGATATCTTCGCAAAGCACTCAACAACGTTATGGTATTCTACTATTCATGCCAACCATCTACGATTTCCTTTGCCCAGAACTTGACATGATTCAGATCACAGTTGTGTATTCATGCCAATCTTTTACAGTTCCCTTCACCTAAAACTTGGCCTGATTTAGTTCACAGTCATCAAATTGACCATGTTTTGATCTCATTTTCAACATGTTTTTTGCAACTTTCCAGAATAAGATGTATATAAAAACGGCAGATACCAACAGTTCAATACAATTTGTAAGAACGAGATGATGTTCAGTCTTTATTTTCAAAAATCATGTTCAAAGAAAAAATTGTTACTTTTCGAGAAGTTAATTGGTCAATTTTTGGAATAAAGGGATATTAAAATTACTATAGAAGATATATGGAAAAGCTTCTTTCCTTCCTTCTAATTCATAATTTCCTTTTGTAAGTATTGCAATTTGAGAAATAGCACAGAACAGAACACAATACTACAGAGTTAGAAAATAGAGAAAGCAGTATATTGTAGTAGAGTCAAGTGAGTTGTGAACTGTTATCTTTGTCCAAAAATGTTAAATGAGTTGTGGACTAGTGCAGCCACTTAAGCAGAGGAGTGGAGCTTTCCACTGATAGAGAAGTGTAAAATTTGTGGTGAAACAGCACTGGCAGGATATGTAAAGAATTGCTGACAAGGGTTACTCGAGTAAAGTCACTAATCTAATGATTTGTCACAGTAAAGTTCACTTAACCATGCGGTCTCAGGTTCAATTTCGGGTGGAGACAAAAAACACGTGGTGATTTCTTCCCATCCATCCAAGCCTTGGTGGATGGAGTTACCCGTAACCTGTGCTAGTGCTGGTGGAAGCAGCAGGTAACTCGTGGAAGTAACCGAGCTAAAGTTGATCCGAATACCCCGGTTATAAAATAACAAAACAAAAAAGTAGTTTTGTGACTTTTGTGTTACAAATAGTTAGTTTAGTGACTTTACCTTAACAAAAATAGTTTTCTGACTTGAGTGTTATGAAGAGTAAGTTAGTAATGGTAGGTGAAAGTAACCCGATTCGTTTGTTGTTAAAAAGGTAAAGTTAGGCTGTTACTTTATTCAAGGGCCCACAGTTAGCAAATTTTTGCTTTAGCTCTAGATCATAGAACTGAAAGATAGATGCCTGATATGCTTGCCTTCCAGTGCTAGGGTCATTGTGTCTGCATTAGCACACTTGCCTAAAGCATTTTTACTTTGTTCAAGCCTTGACGTGTTACTAGCTGATGATATTTCTGTTTAGGATGTGAAGGCTGAAGCTTCTTTAGTTCTATTATTGATCTGTCTGTTCATCTGCTGGCTTCTTTTGGGCCCTTTAGCTTGTCCTTCATTCAGAGCCAGTCATAGGAAGCTGTATATGATAGGTGTGTGTCATAGGAAGCTGTCTATGATAGGTGTGTGTCAGAACAATTATTCTCCTTAACTTTTTCCCTGAATCAAGTTTCAGAATGATAATGATGGCATCATAATTATTCCCATGACTGAACGAATCCTATGGGAGAACTAGGGAAGGAAGCAATATGATATTGTTCCTTAATGAAGCTCCAATTTTGGAAGGTTGAATGGCCCGGGTTTGGAGAGGGGGGGGGGGGGAGAGGGGAGGAGCGAACCATGTATCCTGCACTAAGCACAAACAGGAAGAAGTCCCATCAAAGGCTAGGTCATATGTGTGATGTGCAAGGCGAAGGTAAATGACACTAAGAGGGATGATCTTCCTATTTCTTTTCGCTAGAAGCAAATTTTGAGCTCTGAGGTTCCTTTTTGAAGATGAACAAACCTTTATTATAAAAGATTAGAGGTGTTCCCTATTGTTGATAAACTTATTTACCTTATAAAAAAAATACAAACCTCTATTATCATTCATGTTCGAATTGGCTGTACTTATTCTGTTCTTGCAGAGAACAGAAGAAATAAATCACTTGGTTTGTCCCTTTGGGGACATCTGATAAAACTGTAAATATATCACAGGTTCCAATGGTTCACCGTAAAACATAAAAGTGATTAGTAGCTCTGAATTTTTAACTGGCTGAATGTAATATCATCAAGCTCTTTGTGCATTTAAATTTCATGATCCTGCTTACTTGTGAACTACTTTTATTTGTTATTTTCTACCTTTTTGGTTCACCCAGAAAGATGAATGTAGAAACATAGCTCATCTGTCAGAAAATACAGTCAGTAAGAAGTGATTTACCTGTTCAGGCAACCACGATTCTATTATTCATGGTCTTTATTGGCAGTTTCATTAAGACTTAGAACTACTCATAAAGCTTGTGTTTTTCGTGTTCCAATGTAATACTCACATCTTAGCTTGACGTGAAACTAAGCTAGCCACACACACTGCATCAGATGCTTTTCATATATCCAACATTCATGCCATACAAAAGACATATGACCTTTCTGTCATGTTTCCAATAATGCTTCACTAATTCATTGAAACTGGCTACATGCATAGGGCCTACATAAGATTTTTGAATTGACAGACGTCCAACAATGCTTTTCGCAGTTGGGGTATAGTGTTTTATGGTGTCTGGTCTAATAGAAAGTTAATTTCAATGACAGAACTTGCAGTGTGGAGAAAGTGTAACCATCGAAGGCCGAGCTTACACCATTTCAGCTGTAACTCATCGTTATCAGCTTCGTAAAGGGAAATACGAGCCTAGTGAGAAGAGGCTTGATGTGTTGTCTACTGGAAGATACATCTTAAATTTGTACTTAGAAAATTTGCTAGAACAATCTTGACTATGATGTAGATTACTCCACTTTTCCCTTCATCTTTATGTATACATTATGAAAATACAACTTCATTCAATTG-CCTGTGTCAAATG</genome_strand>
        <mrna_strand>GGAAATGGCTCTGGTTTCTAACACTAACTCATTCTTAAAG....................................................................................TCACAGAGGCACCAAGTTTACTGCAGAAAGAAGGAGAAAGATAAGAGTCAAAATCCCCAACCCTATAAAGTCATTGAAATTTCACCCCCTCCCAAGAACCTTGGCATACGTTGCCTCCCCTCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTGCAGTGTGGAGAAAGTGTAACCATCGAAGGCCGAGCTTACACCATTTCAGCTGTAACTCATCGTTATCAGCTTCGTAAAGGGAAATACGAGCCTAGTGAGAAGAGGCTTGATGTGTTGTCTACTGGAAGATACATCTTAAATTTGTACTTAGAAAATTTGCTAGAACAATCTTGACTATGATGTAGATTACTCCACTTTTCCCTTCATCTTTATGTATACATTATGAAAATACAACTTCATTCAATTGCCCTGTGTCAAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U566289" ref_strand="+" ref_description="SGN-U566289 Tomato 200607#2 [12 ESTs aligned] (*GB) gi|157345403|emb|CAO14701.1| (e_value=5e-84) unnamed; (*ATH) AT5G40490.1 (e_value=1e-79)  Symbol: None | RNA recognition motif (RRM)-containing protein, ribonucleoprotein, Xenopus laevis, PIR:S40778; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) | chr5:16242604-16244937 FORWARD | Aliases: MNF13... ; (*SWP) sp|Q99383|HRP1_YEAST (e_value=1e-34) Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae GN=HRP1; ">
      <seq>gaatccgaacatactctaatcgaacgttcccctatcaaactatctagggttttggtatataaaagcgccgacaacgtcctgtactagatcagaccgcatattttcacggtgaacctcagagctccggttccgattcattgaaaacttccttgaaaaacaccgacaaacgtcttcttctcgatggaggaacaaaatgggactgtaaatggtgttaaaatcaagctggaggaagaagaaactaatgacgaccttagaactactcccgaccatcaaaacgacgccggcgcttctcagcctcttaccggagatggtgctagtcctggaaagatttttattgggggcttggctagagagacaacttcagctcaatttgtcaagcacttcggtaaatatggtgaaattattgattccgtgattatgaaggaaaggcggacaggacagccacgtgggtttggttttgtgacttatgctgacccatccgtggtagataaagtcattgaggacgaccatgttataaatggaaagcaagtggaaatcaagcgaactatacctagaggaggaggttccagctcaaaagatttcaagacaaagaagatttttgtgggcggtatcccaacaacaattagtgaagatgagttcagagacttctttttaaagtttggagaggtgaaagagcaccagatcatgcgtgaccattctactagtcgttctcgtggctttggattcatcacttttgacacagaaaaatctgtcgaggatatcttggctaatggaaacaagcttgatttttctggaacccaggtggaaatcaagaaggctgagcccaagagacctaatgcgccacaaccagccccattcaggcgtcaagggaatccaagagctgcatttggtggtggattttcagatgcttatggtggatatggagactctggttatggtgttgttgctggtcctggtcctggtccttacaggtctggtggcccctatggtggcagatccagtgcatttggtggatatagtggaggaggaatgggtggatatggagcatatggtggcggtggtgcctacggaggaggtttcagggaggaggcttcttttgggtattctagccgttatggcagtggagcctttggtagaggctacgatgttggtggtggatatggaggagcaggtgaaggttatggaggatatggtgctggtggcggtggatatggcagtggatatggtgccgctggtcttggcagtgggtatggaggagatagtgcaggaggttcaatgtatggaagcagtagaggaagctatggtggtgctggtgctggttcaggcagataccacccttatggaagatagaaagtgaaatgttgaaggtgcaaagctgaattgtttctggcttggtgattttaagcttatgaccagagatgtatactcatcaagcacttgttgagagctaaatcttgtttttttttctcttatcgaattttaattgaaaaaatattagttcagttaatatactggtgtctttgatatcgattggtttatcaaggaacacgactcatccatctgcaatcctcaagcagcattgtcaaattgatgttcaattcttttatgtgctagaggtttgcatctcttttttcttttaattagtttggactaaaccagtaaatttatggatcctagagactgtctaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="-" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="78973" stop="74680"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78674" g_stop="78352" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="323" r_length="323" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78351" i_stop="77240" i_length="1112">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77239" g_stop="77199" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="364" r_length="41" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77198" i_stop="77116" i_length="83">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="77115" g_stop="76952" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="528" r_length="164" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="76951" i_stop="76831" i_length="121">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="76830" g_stop="76728" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="631" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="76727" i_stop="76633" i_length="95">
            <donor d_prob="0.731" d_score="1.00"/>
            <acceptor a_prob="0.915" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="76632" g_stop="76463" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="632" r_stop="801" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="76462" i_stop="75867" i_length="596">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="75866" g_stop="74980" g_length="887"/>
          <reference_exon_boundary r_type="cDNA" r_start="802" r_stop="1688" r_length="887" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="-" ref_id="SGN-U566289" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1688</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U566289" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78674" e_stop="78352"/>
          <exon e_start="77239" e_stop="77199"/>
          <exon e_start="77115" e_stop="76952"/>
          <exon e_start="76830" e_stop="76728"/>
          <exon e_start="76632" e_stop="76463"/>
          <exon e_start="75866" e_stop="74980"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATCCGAACATACTCTAATCGAACGTTCCCCTATCAAACTATCTAGGGTTTTGGTATATAAAAGCGCCGACAACGTCCTGTACTAGATCAGACCGCATATTTTCACGGTGAACCTCAGAGCTCCGGTTCCGATTCATTGAAAACTTCCTTGAAAAACACCGACAAACGTCTTCTTCTCGATGGAGGAACAAAATGGGACTGTAAATGGTGTTAAAATCAAGCTGGAGGAAGAAGAAACTAATGACGACCTTAGAACTACTCCCGACCATCAAAACGACGCCGGCGCTTCTCAGCCTCTTACCGGAGATGGTGCTAGTCCTGGGTATTTTTTTTTACTGTTTTGTCCTTTACGTTCTAGGCTGTACCCTTTTTCTTTTATCTAAGACCCATGCTGTATGTTTTTTCTTCTTTTAGTATTGTTATTAGGGCTTGTGTTTAATAGGTATTAACTTGCAAGTGTTGTTAATGTCGAGATGATTAAGACCTGAAGCTAGGTTGTAAGCTCCTTTCTCAAAGGAGGAAGGAAAACGATAAGCATAGTTATTAAATTGCTCTTAATTAAACAAGGTGAATAAATATGTTGATGATTAGGAATATAAATTTAGAGTTGAAATTTCATCATTCTGTATGAATCAGAATCAGAGTTTAAGATGCTGTTTGGGCTTGATTTTAGTTATTTTTCAGTTTCTTAGTCCTCATAACTTTTCATTGTGTTACATTTATATTTCTTACGTTTTTGCTCTCCTTCTTGGAGAGGAGTTCGTGGAGGACACAAATTAGGGTAGAAGGTTAGTATGTGCTAGTGCATTGTCTTGTTGTTTGTCCATTAATAGTAGTATTATTACTCTTGTAGTTTCTTTGCCTTTCCGATCTTTGTTACTATTTGTTGAATCTTGTACTTTGACTATTGTATTTGTTTTGTTTTAATACTCTTATTTTATCATCCGTTGTTGTTTTTGTTACTGTGTTGTTTCCCGCACTTCCGCTATTTCTTTTTTCTGTATGGCTTTGGACTGTTTTCTTGAGCTGGTGGTGTATCTGAAATAATCTCTGCATTTATGAGGTAGGGGTAAGGCTTGTATACACTCTACACTCTACGCTCTCCTCATACCCCACTTTGTGGTTGTTGCTTATCTGCAACATACCCATCGAAATTTTTTAAGTGAGCTCTGAATGTTGTTGCTTGTCTATGCCTTCCATTTTAACAACACTGTAATTTACTATCAGTGTATTGGATAAGTTTTTTAATTTGATGATTTTCTTCTGTGCCCTTTTCAATTTCTTCTGATGTGAGGTTCTTCTCGTTGAAGTTACTTATCTCAAAAAAAAAGTTAGTTGTTGGTTGGGCATGCCTCTCAGTTTTCATAGAATGTTATCCTATTAATCAACTTGCTCATGGTATTTTATTAATCAATGGATTTGGTGGCCATGCAGAAAGATTTTTATTGGGGGCTTGGCTAGAGAGACAACTTCAGGTTTGTCGAATAACATCCGCTGCTTTGATCTTCTGCCAAATTGTTTTCTTTCTTGCCTCTAATGTTGCATTGTATATCTGCAGCTCAATTTGTCAAGCACTTCGGTAAATATGGTGAAATTATTGATTCCGTGATTATGAAGGAAAGGCGGACAGGACAGCCACGTGGGTTTGGTTTTGTGACTTATGCTGACCCATCCGTGGTAGATAAAGTCATTGAGGACGACCATGTTATAAATGGAAAGCAAGTAAGATTACATTAGCCTTCTATTTTATTTCATTCTTATAGCAGCTTGTGATTTCATTTCCTTTTTATTTTAGTGTGGATAGACAATTTGGGACCTCATGCTGATGTTTTGATTGTGTCAGGTGGAAATCAAGCGAACTATACCTAGAGGAGGAGGTTCCAGCTCAAAAGATTTCAAGACAAAGAAGATTTTTGTGGGCGGTATCCCAACAACAATTAGTGAAGGTTATATTTCTGTAGCTAGACTGATCACCTTGCCTTTAGTCGTTGGATTCTTTTGAAACAAGTCTTTGAGGTATTAAGTTGCATTTATATTTCAGATGAGTTCAGAGACTTCTTTTTAAAGTTTGGAGAGGTGAAAGAGCACCAGATCATGCGTGACCATTCTACTAGTCGTTCTCGTGGCTTTGGATTCATCACTTTTGACACAGAAAAATCTGTCGAGGATATCTTGGCTAATGGAAACAAGCTTGATTTTTCTGGAACCCAGGTTAGTATAGCCATAGTGTTGTCTAATTAAGGCGGTGATACTTTTTCTAGATTGTTTCATTAATCTTGTGAAGTTATCAAGCTTTTCTGCCCTTCTTCAAACATGATTTCAGTGGCAATGTTGCACTCTTAAGTATATGTGCTTCTTGTGTTTTTTTCTTTATGTTCTAGGCCTTCTGACAAATGTCCTTAATTTGATAAGGATTGAGCTTGTGTTCTTTCTCAATTTTCTTGGAAAGAATTAATGAAACTGACTGCCAAACCCAATGAAATATCAATAGTATGTATTTGGGTAGCAATGTTTCTATGTTCATTGTGACTTGGTACTGATGCATCTTTTGTCTAACTTATCATTGAGTTGAGGTGCTGAAGTTGTCTTAACTGTATTGAGGCTCAAGAAGTTGAGAATTGTTCTTGTGTATCCATACAAGCTTATTTTCTTAGTGATGATGCTCAAGTTACTATTGTTTGGAAATAATTAGTAATTGAAATGATTCTGCTAATGGTAGTTGAACATTCATCTGTTGCATGATCATGTTATTTTAAATAACCTTTTGAAGCTTGGTTAAGCTAAACAGTTCTCTACATGGCAAATAGGTGGAAATCAAGAAGGCTGAGCCCAAGAGACCTAATGCGCCACAACCAGCCCCATTCAGGCGTCAAGGGAATCCAAGAGCTGCATTTGGTGGTGGATTTTCAGATGCTTATGGTGGATATGGAGACTCTGGTTATGGTGTTGTTGCTGGTCCTGGTCCTGGTCCTTACAGGTCTGGTGGCCCCTATGGTGGCAGATCCAGTGCATTTGGTGGATATAGTGGAGGAGGAATGGGTGGATATGGAGCATATGGTGGCGGTGGTGCCTACGGAGGAGGTTTCAGGGAGGAGGCTTCTTTTGGGTATTCTAGCCGTTATGGCAGTGGAGCCTTTGGTAGAGGCTACGATGTTGGTGGTGGATATGGAGGAGCAGGTGAAGGTTATGGAGGATATGGTGCTGGTGGCGGTGGATATGGCAGTGGATATGGTGCCGCTGGTCTTGGCAGTGGGTATGGAGGAGATAGTGCAGGAGGTTCAATGTATGGAAGCAGTAGAGGAAGCTATGGTGGTGCTGGTGCTGGTTCAGGCAGATACCACCCTTATGGAAGATAGAAAGTGAAATGTTGAAGGTGCAAAGCTGAATTGTTTCTGGCTTGGTGATTTTAAGCTTATGACCAGAGATGTATACTCATCAAGCACTTGTTGAGAGCTAAATCTTGTTTTTTTTTCTCTTATCGAATTTTAATTGAAAAAATATTAGTTCAGTTAATATACTGGTGTCTTTGATATCGATTGGTTTATCAAGGAACACGACTCATCCATCTGCAATCCTCAAGCAGCATTGTCAAATTGATGTTCAATTCTTTTATGTGCTAGAGGTTTGCATCTCTTTTTTCTTTTAATTAGTTTGGACTAAACCAGTAAATTTATGGATCCTAGAGACTGTCTAA</genome_strand>
        <mrna_strand>GAATCCGAACATACTCTAATCGAACGTTCCCCTATCAAACTATCTAGGGTTTTGGTATATAAAAGCGCCGACAACGTCCTGTACTAGATCAGACCGCATATTTTCACGGTGAACCTCAGAGCTCCGGTTCCGATTCATTGAAAACTTCCTTGAAAAACACCGACAAACGTCTTCTTCTCGATGGAGGAACAAAATGGGACTGTAAATGGTGTTAAAATCAAGCTGGAGGAAGAAGAAACTAATGACGACCTTAGAACTACTCCCGACCATCAAAACGACGCCGGCGCTTCTCAGCCTCTTACCGGAGATGGTGCTAGTCCTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGATTTTTATTGGGGGCTTGGCTAGAGAGACAACTTCAG...................................................................................CTCAATTTGTCAAGCACTTCGGTAAATATGGTGAAATTATTGATTCCGTGATTATGAAGGAAAGGCGGACAGGACAGCCACGTGGGTTTGGTTTTGTGACTTATGCTGACCCATCCGTGGTAGATAAAGTCATTGAGGACGACCATGTTATAAATGGAAAGCAA.........................................................................................................................GTGGAAATCAAGCGAACTATACCTAGAGGAGGAGGTTCCAGCTCAAAAGATTTCAAGACAAAGAAGATTTTTGTGGGCGGTATCCCAACAACAATTAGTGAAG...............................................................................................ATGAGTTCAGAGACTTCTTTTTAAAGTTTGGAGAGGTGAAAGAGCACCAGATCATGCGTGACCATTCTACTAGTCGTTCTCGTGGCTTTGGATTCATCACTTTTGACACAGAAAAATCTGTCGAGGATATCTTGGCTAATGGAAACAAGCTTGATTTTTCTGGAACCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAAATCAAGAAGGCTGAGCCCAAGAGACCTAATGCGCCACAACCAGCCCCATTCAGGCGTCAAGGGAATCCAAGAGCTGCATTTGGTGGTGGATTTTCAGATGCTTATGGTGGATATGGAGACTCTGGTTATGGTGTTGTTGCTGGTCCTGGTCCTGGTCCTTACAGGTCTGGTGGCCCCTATGGTGGCAGATCCAGTGCATTTGGTGGATATAGTGGAGGAGGAATGGGTGGATATGGAGCATATGGTGGCGGTGGTGCCTACGGAGGAGGTTTCAGGGAGGAGGCTTCTTTTGGGTATTCTAGCCGTTATGGCAGTGGAGCCTTTGGTAGAGGCTACGATGTTGGTGGTGGATATGGAGGAGCAGGTGAAGGTTATGGAGGATATGGTGCTGGTGGCGGTGGATATGGCAGTGGATATGGTGCCGCTGGTCTTGGCAGTGGGTATGGAGGAGATAGTGCAGGAGGTTCAATGTATGGAAGCAGTAGAGGAAGCTATGGTGGTGCTGGTGCTGGTTCAGGCAGATACCACCCTTATGGAAGATAGAAAGTGAAATGTTGAAGGTGCAAAGCTGAATTGTTTCTGGCTTGGTGATTTTAAGCTTATGACCAGAGATGTATACTCATCAAGCACTTGTTGAGAGCTAAATCTTGTTTTTTTTTCTCTTATCGAATTTTAATTGAAAAAATATTAGTTCAGTTAATATACTGGTGTCTTTGATATCGATTGGTTTATCAAGGAACACGACTCATCCATCTGCAATCCTCAAGCAGCATTGTCAAATTGATGTTCAATTCTTTTATGTGCTAGAGGTTTGCATCTCTTTTTTCTTTTAATTAGTTTGGACTAAACCAGTAAATTTATGGATCCTAGAGACTGTCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U576125" ref_strand="+" ref_description="SGN-U576125 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>ggtttgaggactaccagttaggtgataaaggtcaggaatgtggttcttcatttagtgtttccaccgcacagggatttggtctcatcaacaacacgaggcctttcatatcaccagcattaaaccaatcaactgttgatcaacctttttattcccattttccaagtacatttacagtggaaagagcaggggttgacactctatcaaaaaattctacctcattaacacaacaggccatttcccatatatttcccccaaacccgtcattgttgaactcttgtggcactaaaaatagagtgcaatctactgcctcagatgtttccttttctccgtggaacaattcaaatcagtttgcaccttttaaaccagcttccagttcttccactgccttcactactccattaaggaacccattttctttatcaacatctgcccctctatctccatgttcggtctcaccttccacatatcctttgttaactaagccatcaggccatgatttttatcagaagaactctttttctaccactcctgttttaactacaggaagcgcttcacaatccacgttatgcttgaactgcctaaagcagtcacagcctactccaccaggactttctaatgtttcaagcactccacttgctgcgaatcaaaatactcctctgttcattggtcctctgcagccagaaataactcctaaagttggaaacacactcccaacaacaatgcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="-" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="86292" stop="84717"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85992" g_stop="85963" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85962" i_stop="85873" i_length="90">
            <donor d_prob="0.988" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85872" g_stop="85250" g_length="623"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="653" r_length="623" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="85249" i_stop="85091" i_length="159">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="85090" g_stop="85017" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="654" r_stop="726" r_length="73" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="-" ref_id="SGN-U576125" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>727</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U576125" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85992" e_stop="85963"/>
          <exon e_start="85872" e_stop="85250"/>
          <exon e_start="85090" e_stop="85017"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTTGAGGACTACCAGTTAGGTGATAAAGGTATCCTGAACTTTTTCTCTTATCTGTAGATAATAAAAAATCTACCTTGTATTTCATTAACATTTTTATTCTTCATGGGTGAATTTGCAGGTCAGGAATGTGGTTCTTCATTTAGTGTTTCCACCGCACAGGGATTTGGTCTCATCAACAACACGAGGCCTTTCATATCACCAGCATTAAACCAATCAACTGTTGATCAACCTTTTTATTCCCATTTTCCAAGTACATTTACAGTGGAAAGAGCAGGGGTTGACTCTCTATCAAAAAATTCTACCTCATTAGCACAACAGGCCATTTCCCATATATTTCCCCCAAACCCGTCATTGTTGAACTCTTGTGGCACTAGAAATAGAGTGCAATCTACTGCCTCAGATGTTTCCTTTTCTCCGTGGAACAATTCAAATCAGTTTGCACCTTTTAAACCAGCTTCCAGTTCTTCCACTGCCTTCACTACTCCATTAAGGAACCCATTTTCTTTATCAACATCTGCCCCTCTATCTCCATGTTCGGTCTCACCTTCCACATATCCTTTGTTAACTAAGCCATCAGGCCATGATTTTTATCAGAAGAACTCTTTTTCTACCACTCCTGTTTTAACTACAGGAGGCGCTTCACAATCCACGTTATGCTTGAACTGCCTAAAGCAGTCACAGCCTACTCCACCAGGACTTTCTAATGTTTCAAGCACTCCACTTGCTGCGAATCAAAATACTGTAAGTGTTTCTGAACGTATATGCAATTAGATCTCATTTATATATCTCCGCCATTTGCTTTCTGTCATGAATAATATAAAAGGCACCTTGTGGTCTATAAAATCGGTGAAACATTTCTATTGCGGTGTTGTACATCTAAGTTGTTGCCTACTCTTGCAGCCTCTGTTCATTGGTCCTCTGCAGCCAGAAATAACTCCTAAAGTTGGAACAACACTCCCAACAACCAATGCTTC</genome_strand>
        <mrna_strand>GGTTTGAGGACTACCAGTTAGGTGATAAAG..........................................................................................GTCAGGAATGTGGTTCTTCATTTAGTGTTTCCACCGCACAGGGATTTGGTCTCATCAACAACACGAGGCCTTTCATATCACCAGCATTAAACCAATCAACTGTTGATCAACCTTTTTATTCCCATTTTCCAAGTACATTTACAGTGGAAAGAGCAGGGGTTGACACTCTATCAAAAAATTCTACCTCATTAACACAACAGGCCATTTCCCATATATTTCCCCCAAACCCGTCATTGTTGAACTCTTGTGGCACTAAAAATAGAGTGCAATCTACTGCCTCAGATGTTTCCTTTTCTCCGTGGAACAATTCAAATCAGTTTGCACCTTTTAAACCAGCTTCCAGTTCTTCCACTGCCTTCACTACTCCATTAAGGAACCCATTTTCTTTATCAACATCTGCCCCTCTATCTCCATGTTCGGTCTCACCTTCCACATATCCTTTGTTAACTAAGCCATCAGGCCATGATTTTTATCAGAAGAACTCTTTTTCTACCACTCCTGTTTTAACTACAGGAAGCGCTTCACAATCCACGTTATGCTTGAACTGCCTAAAGCAGTCACAGCCTACTCCACCAGGACTTTCTAATGTTTCAAGCACTCCACTTGCTGCGAATCAAAATACT...............................................................................................................................................................CCTCTGTTCATTGGTCCTCTGCAGCCAGAAATAACTCCTAAAGTTGGAAACACACTCCCAACAA-CAATGCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U589456" ref_strand="+" ref_description="SGN-U589456 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|165905462|dbj|BAF98996.1| (e_value=1e-19) nucleoporin; (*ATH) AT1G10390.1 (e_value=2e-20) | Symbol: None | nucleoporin family protein, contains Pfam profiles: PF04096 nucleoporin autopeptidase, PF03093 nucleoporin FG repeat family | chr1:3407025-3412844 REVERSE | Aliases: F14N23.29, F14N23_29; ">
      <seq>aattctcttcttctccgtctcatgtcgatattttttggaaacaccgcttcaaactttaatgcagcaacgaatgctacatctggtcaaacacaaaactcatctacgaattcgtctacttcaccgacatttggaaagaaatatgactttaatagtgtggccaatgaacctttggtggggtctagggatgtcaatgtctcggactcctccatatttggatatccaagagctcctgcatttggtgtttcaagcaactcacactttggcaccgcaagacttgattcatactcctttggacaaccggcagtatctatgtcagggagcaaaggagaagaaagtacaccgccttttttcatgagctctggttttgggaagtcaacatttggcattaatcagaaaggaagtagaatagcatcatatattgcaactccagagaacgatatcacaggattcagtggcggaaaaattcaatccatttgtggaatgcaggcttataaagataaaagccaagaggagttgaggtttgaggactaccagttaggtgataaaggtgaggaatggcattatatatatgttacacttatactgctattttcatgaaaggagggatatcatatttacttttctagagcggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="-" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="90188" stop="86651"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89888" g_stop="89837" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89836" i_stop="89126" i_length="711">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89125" g_stop="88853" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="325" r_length="273" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88852" i_stop="88674" i_length="179">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88673" g_stop="88452" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="547" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88451" i_stop="87036" i_length="1416">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.409" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87035" g_stop="86951" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="548" r_stop="632" r_length="85" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="-" ref_id="SGN-U589456" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>632</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U589456" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89888" e_stop="89837"/>
          <exon e_start="89125" e_stop="88853"/>
          <exon e_start="88673" e_stop="88452"/>
          <exon e_start="87035" e_stop="86951"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTCTCTTCTTCTCCGTCTCATGTCGATATTTTTTGGAAACACCGCTTCAAGTAAGTTGAACTTCATTCTTTATGCTTTTGATACATTGTGTTCTGTTTTTTTTATGGGTTTTTTACTGAATTTTCTTGATAACTAAAGCATATTGTAGTTTAAATCAAGTTCAACAATCGATGTAACTGGGATCCAAGAAAAGAGGCAACATAGTAGTATAACAAGAATGTGCTTTCACACAATTTTCAAATTTCTTGCATGTTCTTCAAAACTTAATTTTCTTTCTAGCTTGAGTTTGGTACATTACAATGTCTTATAAACTGTATTTTCCATACAATGCTCTATAACCTCTGTTTTTCCAAATACGCTAAGAAGAAAGACCACATAGGCTATTGCATGGGAAATTGGGAATGACATACATAAGTGAGGATTGACATAATATATAGATGCTACACTTAATAATGTCGATTTCATGAAAGTAGAGATATCATATTTACTTTTCTAGAGAAGTAAGGCGGCTTTGGAATTGGTCTAAAAGTTTAATCTGCTCCTTGTGGTAGTAGCTATGCTTATTGAGCTGTACTCTTCTAAAAAAATAAAATGTTAGTAATAACTGTAATATCTCAATGGGATTTCGTATGGTGGGTGGGTAGTGTATTGCTTACAGTTTCTGGAACAGCTATTGTGGCAGCTATTGATGCATGTAGTTGTCTTTAATTAGCGATTAGAAAATCAATCCAATCTGTTTACCTAACTGAAGTACCGTTAAGACTTTAATGCAGCAACGAATGCTACATCTGGTCAAACACAAAACTCATCTACGAATTCGTCTACTTCACCGACATTTGGAAAGAAATATGACTTTAATAGTGTGGCCAATGAACCTTTGGTGGGGTCTAGGGATGTCAATGTCTCGGACTCCTCCATATTTGGATATCCAAGAGCTCCTGCATTTGGTGTTTCAAGCAACTCACACTTTGGCACCGCAAGACTTGATTCATACTCCTTTGGACAACCGGCAGTATCTATGTCAGGGAGCAAAGGTGAACTCTATTGTCCATTTTCTCATGTATTGGAGCAGATTAATCAATATTTTGTTCTGTTATCTATATGGTCTGAAATCCCTGCTGAGCTTTTATTAAACACTACTGAGTACTATTTATTTCTACTTCATATTTTTGGATAGTTTAAGTGTTTAATCTTGATTAACTTTGCAACCCAGGAGAAGAAAGTACACCGCCTTTTTTCATGAGCTCTGGTTTTGGGAAGTCAACATTTGGCATTAATCAGAAAGGAAGTAGAATAGCATCATATATTGCAACTCCAGAGAACGATATCACAGGATTCAGTGGCGGAAAAATTCAATCCATTTGTGGAATGCAGGCTTATAAAGATAAAAGCCAAGAGGAGTTGAGGTTTGAGGACTACCAGTTAGGTGATAAAGGTATACTTGTTCTCTTATGTGATTCAGATTAAGCTTCTTCAAATATATTATTGCTACCTTTATATGGGCATTTCTTCCTGCAATTAAGTTAATTTCAAACAAATTCTTTGGTCTCTGTCCAAATACACTCAGAAGAAAGACCATTTAACCTATTGGTATCTCCATGAGGTAATTTAAAAAGGTTGTCCTCCTCCCACCTGTGAAAATGAACTTGTCTAATATTTCATTCTTCCCCAGGTTACGCAATACAAAAGGTAAATTCAAAAATCTGGGCATTTGAATTTATATGGTTGTTTGGGTGCATTTTAGAGATGATTTCACCTGGTGGAGAAGGCAACGGTGGTGGGAATATTTGGTTGCCTATGGAAGAGGAGTAATCTTTTATAACGAATGTCCATACTGGTAATGAGCTTAAAATGTACCTTTGGCACACATGCATGTCCATTTTTTGAATGATTCATCAGCACATTGTTTATTTGGTTTTAGTCATTTGATTAGGTGCATCTAGAACTGGAGACATCAACAGGATACATATGACAACTCCAATTGATATTTGATAGTTGTAGGCTTGACCAAGAATAATCTACAGTTTTTTTATAACCAGGAGTAACCTTAACTTCACATTGTATATGCATCTTTGGAGCATAGGTGATTTTTAAAAAATGCTTTGTTTGATTTATTTTTAATGATAATGAAAAGGCTAAAAGAGAGAACAATACTTACCAATCAAATAAAACAAAGAGGGAAAGAGCAGAAATTGAAATATGGAACTTCGTATGAAGTCACAGTCAAAATGCAAAAAGGTAACAGTGAGTGATTCAATCAGGCTGACTGTTTTCAGTACATAAAATAAAATGAGAGCACATGAGTAGGAACAATGGCCAAAGAATATCAAAGCAGGAGAACAGAATTAGGAAGTTGTCCGATGCATGAGGAGTTTATACAACCCTATAAATCTGAAAACGGTGAAAGGCGTCTGAAAGAACTAAGTCACAGCGACAAGAGGTGGGTTGCTGTGAATTTGTGATGCTAGGCTCAGCTTACCGAGTAATGTTGCAGCACTAATAACATGCTTTATTTCAGAACATTAATTTATTAGAGTGCTAAAAGAATGTGATCTACTTCATCTGACAAGTGAAATAGCAAAATAGGGAAGAGATTGCAGAGATCACAACTACTAGGGTACAACATGTCAGTTAACCAAGTAATCCTCCTTTAAACATGACAAAATAGAAGTTTACGGAGAACTAGGACCGAGGGATGCACAGACAAGTTAGAACTCGTCTTCATCTTCTTCTTTTTTTATGACAAGGTAACCCACACAGGAATGATCTACAGACACTATTTGAGTATGTTATTCCCATGATTTCTCTGCGAATGGATTAAATACATCTTTCTTTCTTGCCTGTGGCCCAGGTGAGGAATGGCATTATATATATGTTACACTTATACTGCTATTTTCATGAAAGGAGGGATATCATATTTACTTTTCTAGAGCGGC</genome_strand>
        <mrna_strand>AATTCTCTTCTTCTCCGTCTCATGTCGATATTTTTTGGAAACACCGCTTCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTAATGCAGCAACGAATGCTACATCTGGTCAAACACAAAACTCATCTACGAATTCGTCTACTTCACCGACATTTGGAAAGAAATATGACTTTAATAGTGTGGCCAATGAACCTTTGGTGGGGTCTAGGGATGTCAATGTCTCGGACTCCTCCATATTTGGATATCCAAGAGCTCCTGCATTTGGTGTTTCAAGCAACTCACACTTTGGCACCGCAAGACTTGATTCATACTCCTTTGGACAACCGGCAGTATCTATGTCAGGGAGCAAAG...................................................................................................................................................................................GAGAAGAAAGTACACCGCCTTTTTTCATGAGCTCTGGTTTTGGGAAGTCAACATTTGGCATTAATCAGAAAGGAAGTAGAATAGCATCATATATTGCAACTCCAGAGAACGATATCACAGGATTCAGTGGCGGAAAAATTCAATCCATTTGTGGAATGCAGGCTTATAAAGATAAAAGCCAAGAGGAGTTGAGGTTTGAGGACTACCAGTTAGGTGATAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGGAATGGCATTATATATATGTTACACTTATACTGCTATTTTCATGAAAGGAGGGATATCATATTTACTTTTCTAGAGCGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U574848" ref_strand="+" ref_description="SGN-U574848 Tomato 200607#2 [3 ESTs aligned] ">
      <seq>gcgtcatttacactcaccggcagttcggctctcagctctcaactctccgatgacaatgtcgatcaaaacccttttaactcttcgatgacgatgtcaatcgaaaccacttaatcgattttcctgtcttagtacttcggctctcaactctccgatgacgatgtcgatcaaaacccttttaactctccgatgacgatgtccatcggaatccctaaatcgattttcccggcgatcaatctattggtgttctttccattatctactagagtactagagtagaattcttgtatgcattctacccttctttttttacaaaaatcaagaagttggtatcaaaagaagaaaccctaaactaattttcccgcggttcttatctgctcaagtaatagtactggtcttcccagggagtcaaaagatgtacatgcgatggggagtcaaaagaagaatttgcacgaacgatatctcaaagtttcttcgtttatgggacaaaatggaaggactgcagtccagagattacaattgagtaccttagctatatctcagatatttttgtgacttgttctctattttgttaagatgatggaattttttcttctccaatatgagttgcagagcggtactgaacagagtatctgaagatttaggattactgtactcaatgtaacttttgcgtcttgcatatttttggtgattcattggttccttattcactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="+" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="94058" stop="95915"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94357" g_stop="94757" g_length="401"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="401" r_length="401" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94758" i_stop="95109" i_length="352">
            <donor d_prob="0.366" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95110" g_stop="95149" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="402" r_stop="441" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="95150" i_stop="95345" i_length="196">
            <donor d_prob="0.464" d_score="1.00"/>
            <acceptor a_prob="0.804" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95346" g_stop="95615" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="710" r_length="269" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="+" ref_id="SGN-U574848" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>711</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U574848" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94357" e_stop="94757"/>
          <exon e_start="95110" e_stop="95149"/>
          <exon e_start="95346" e_stop="95615"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGTCATTTACACTCACCGGCAGTTCGGCTCTCAGCTCTCAACTCTCCGATGACAATGTCGATCAAAACCCTTTTAACTCTTCGATGACGATGTCAATCGAAACCACTTAATCGATTTTCCTGTCTTAGTACTTCGGCTCTCAACTCTCCGATGACGATGTCGATCAAAACCCTTTTAACTCTCCGATGACGATGTCCATCGGAATCCCTAAATCGATTTTCCCGGCGATCAATCTATTGGTGTTCTTTCCATTATCTACTAGAGTACTAGAGTAGAATTCTTGTATGCATTCTACCCTTCTTTTTTTACAAAAATCAAGAAGTTGGTATCAAAAGAAGAAACCCTAAACTAATTTTCCCGCGGTTCTTATCTGCTCAAGTAATAGTACTGGTCTTCCCAGGTATTGTTCCACCCACTAATAAAGAGGTCTTCCCAGATATTCTTCCATCCACTAAAAAAGAGAAGGAAAATTCTTGCGCTTTTTTAGAAAAAAATTAAAGAATTGTTGGCTTTTTGTATTGACATTGATATTCTTATAGACATATATTAAGAAAATCAAGAATTCTTGCATGAATAATCTTAAAGAAAAATTCAAGAACTTGTCGGTATAGTTTAAGGAAATCAAAGAAAGGGTAGTTTTCAAGAATATGACGTTGCAAATATTAACGAAATTCAATAAATTCAAAAGAATTGTGTTGTCATTTTCTCAGCGGATGTTAAAGATGTTCAAGAATTTGTTTGAACTTTTTTAGGGAGTCAAAAGATGTACATGCGATGGGGAGTCAAAAGAAGGTAAAAGCATTCCTGTCATTTGTTGCTGACCTGAATAAGAGCTGAAGTTTTCTAGTGCATGTTTCAGTTAATTATTGAAATTATTAGAGATCAAATTGTTTCTTTCTAAGTCTCGTAGGCTATATAATTGCATCTTGCTTATGTTCAGATCTTGTAATAGAATGGTCATGCCTGACATATTTATTCAAATTTTCAGAATTTGCACGAACGATATCTCAAAGTTTCTTCGTTTATGGGACAAAATGGAAGGACTGCAGTCCAGAGATTACAATTGAGTACCTTAGCTATATCTCAGATATTTTTGTGACTTGTTCTCTATTTTGTTAAGATGATGGAATTTTTTCTTCTCCAATATGAGTTGCAGAGCGGTACTGAACAGAGTATCTGAAGATTTAGGATTACTGTACTCAATGTAACTTTTGCGTCTTGCATATTTTTGGTGATTCATTGGTTCCTTATTCCACTG</genome_strand>
        <mrna_strand>GCGTCATTTACACTCACCGGCAGTTCGGCTCTCAGCTCTCAACTCTCCGATGACAATGTCGATCAAAACCCTTTTAACTCTTCGATGACGATGTCAATCGAAACCACTTAATCGATTTTCCTGTCTTAGTACTTCGGCTCTCAACTCTCCGATGACGATGTCGATCAAAACCCTTTTAACTCTCCGATGACGATGTCCATCGGAATCCCTAAATCGATTTTCCCGGCGATCAATCTATTGGTGTTCTTTCCATTATCTACTAGAGTACTAGAGTAGAATTCTTGTATGCATTCTACCCTTCTTTTTTTACAAAAATCAAGAAGTTGGTATCAAAAGAAGAAACCCTAAACTAATTTTCCCGCGGTTCTTATCTGCTCAAGTAATAGTACTGGTCTTCCCAG................................................................................................................................................................................................................................................................................................................................................................GGAGTCAAAAGATGTACATGCGATGGGGAGTCAAAAGAAG....................................................................................................................................................................................................AATTTGCACGAACGATATCTCAAAGTTTCTTCGTTTATGGGACAAAATGGAAGGACTGCAGTCCAGAGATTACAATTGAGTACCTTAGCTATATCTCAGATATTTTTGTGACTTGTTCTCTATTTTGTTAAGATGATGGAATTTTTTCTTCTCCAATATGAGTTGCAGAGCGGTACTGAACAGAGTATCTGAAGATTTAGGATTACTGTACTCAATGTAACTTTTGCGTCTTGCATATTTTTGGTGATTCATTGGTTCCTTATT-CACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U579334" ref_strand="+" ref_description="SGN-U579334 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>ataagtatgatcaatcttccaccccaagttgtggggacggtgtatttttctgttgaaaggccaaatgtgaaaaggaaacttgttaacatctggaatagcaaattagaagctcaaggggggacatgcacaggtccacacgatgggcagtcaaaagaagagcggtactggaagaggaacagataatcttaagaatcaggatactatactgagtgtcacttctggcgtgttgcatttcattggttcctgataccattgataaaaactgcattaagggtgccaaagttctcgaacaggttgataagaagtttattcccattgtggcaagcacaacacctgctataattgatcaggatttttctctttgcagtcattgttggtgatgtattttataacgaaccagttcgaaccaaaagaaggtcttgcattctctggaagagactctgctgagaatcacccttgtgcaatccagtgtctccttcaaaattgctgatattgaaagtgaggatgacgtgctttgcacatgtacctctcattctccattgccaaaattgtccagtggggtttgggattcaactgacctcccttaacaaattgaatgcaagtgatggttcattcaagctctcaggatacatttcaggtcctgatttttacgcaatgagcgtataaaggcccnaattgatggataagagatttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="+" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="95617" stop="97826"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95917" g_stop="95975" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95976" i_stop="96074" i_length="99">
            <donor d_prob="0.714" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96075" g_stop="96172" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="157" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96173" i_stop="96594" i_length="422">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.438" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96595" g_stop="96787" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="350" r_length="193" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="96788" i_stop="96988" i_length="201">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="96989" g_stop="97044" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="406" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="97045" i_stop="97158" i_length="114">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="97159" g_stop="97251" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="499" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="97252" i_stop="97330" i_length="79">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.759" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="97331" g_stop="97526" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="500" r_stop="696" r_length="197" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="+" ref_id="SGN-U579334" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>695</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U579334" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95917" e_stop="95975"/>
          <exon e_start="96075" e_stop="96172"/>
          <exon e_start="96595" e_stop="96787"/>
          <exon e_start="96989" e_stop="97044"/>
          <exon e_start="97159" e_stop="97251"/>
          <exon e_start="97331" e_stop="97526"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAAGTATGATCAATCTTCCACCCCAAGTTGTGGGGACGGTGTATTTTTCTGTTGAAAGGTTATGTTATCAAATTTCTTGGGAGCGTTAGGTCTCTTTCTGATATTATCTCAACTAATTATGTCAATAACTCACACGATCTGATGTTTCTTTCTTCAGGCCAAATGTGAAAAGGAAACTTGTTAACATCTGGAATAGCAAATTAGAAGCTCAAGGGGGGACATGCACAGGTCCACACGATGGGCAGTCAAAAGAAGGTAAACCGTCATTTGTATCTAACCTAATAAGAGCTGAATTTTCCTAGTGCATGTTTCAGCTAATTAACTTCATTTCTTTCACCTATGTTTCAAGATTATGTTAAATTGCATTCTTACTAATCATGAAAGCATTAGAAATTACAATGTCTCTTTCTGAATCTCCTAGGCCACATAGTCTCTTTCAAATCCCATCTTGCTTATGTTTTGATCTTGTAATAAAATTTTCTTGCCTGACCTCTTTTATCAATTTTTCAGAATTTTTCACCAATAAAAACTCGAAGTTTCTTAGATTCTGGTATAAAATAGTGGGGACTCCCTAGAGATTACAGTTGAGTACTTTAGCTATATCTCGGATGTTTTTGCGACTTCTTCTCTATTTTGTTAAGATGATGGACTTCTGTCTTTCCCAATATGAGATGCAGAGCGGTACTGGAAGAGGAACAGATAATCTTAAGAATCAGGATACTATACTGAGTGTCACTTCTGGCGTGTTGCATTTCATTGGTTCCTGATACCATTGATAAAAACTGCATTAAGGGTGCCAAAGTTCTCGAACAGGTTGATAAGAAGTTTATTCCCATTGTGGCAAGCACAACACCTGCTATAATTGATCAGGTATATTTTGTTCTTGCATAGTCCATTATGGCCATTCTTGGTTTCTGAGTGCATGAACAAGTATATTCTGTAGTTACTTTTTTCAAACATAGTATCTTCATCACTAATAACAAATGATGATATAGGCTTATACAGGTAAAATTCCGTATAAGCCTATCTGATGCATGAGTTGACTGTTTGCTAATAAGGAGTTTCTCTTAGGATTTTTCTCTTTGCAGTCATTGTTGGTGATGTATTTTATAACGAACCAGTTCGAAGTAAGCAAATGCACTCCAAGTACTTTTAGTTTTCTCACAATTCAAACAAATGAAAATTACTGATTTACATACTTTACTTCTAAAATCTTTTGGTTTGCATATATAATCTGGAAGCCAAAAGAAGGTCTTGCATTCTCTGGAAGAGACTCTGCTGAGAATCACCCTTGTGCAATCCAGTGTCTCCTTCAAAATTGCTGATATTGAAAGGTCCGATCCGTCTTTGTTACACTAGCTAGCTTAAAGATATTTTCTGTCTGGTTTCTTAGGTTTTGTTCATTGCATTCAGTGAGGATGACGTGCTTTGCACATGTACCTCTCATTCTCCATTGCCAAAATTGTCCAGT-GGGTTTGGGATTCAACTGACCTCCCTTAACAAATTGAATGCAAGTGATGGTTCATTCAAGCTCTCAGGATACATTTCAGGTCCTGATTTTTACGCAATGAGCGTATAAAGGCCCAAATTGATGGATAAGAGATTTGAT</genome_strand>
        <mrna_strand>ATAAGTATGATCAATCTTCCACCCCAAGTTGTGGGGACGGTGTATTTTTCTGTTGAAAG...................................................................................................GCCAAATGTGAAAAGGAAACTTGTTAACATCTGGAATAGCAAATTAGAAGCTCAAGGGGGGACATGCACAGGTCCACACGATGGGCAGTCAAAAGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGTACTGGAAGAGGAACAGATAATCTTAAGAATCAGGATACTATACTGAGTGTCACTTCTGGCGTGTTGCATTTCATTGGTTCCTGATACCATTGATAAAAACTGCATTAAGGGTGCCAAAGTTCTCGAACAGGTTGATAAGAAGTTTATTCCCATTGTGGCAAGCACAACACCTGCTATAATTGATCAG.........................................................................................................................................................................................................GATTTTTCTCTTTGCAGTCATTGTTGGTGATGTATTTTATAACGAACCAGTTCGAA..................................................................................................................CCAAAAGAAGGTCTTGCATTCTCTGGAAGAGACTCTGCTGAGAATCACCCTTGTGCAATCCAGTGTCTCCTTCAAAATTGCTGATATTGAAAG...............................................................................TGAGGATGACGTGCTTTGCACATGTACCTCTCATTCTCCATTGCCAAAATTGTCCAGTGGGGTTTGGGATTCAACTGACCTCCCTTAACAAATTGAATGCAAGTGATGGTTCATTCAAGCTCTCAGGATACATTTCAGGTCCTGATTTTTACGCAATGAGCGTATAAAGGCCCNAATTGATGGATAAGAGATTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U585148" ref_strand="+" ref_description="SGN-U585148 Tomato 200607#2 [7 ESTs aligned] ">
      <seq>cactggttcattttttttccatgtgagatttgcaatcaaattggctgaaatgatgtgtagcattttactctctgttggcaccattggattggcacctcgtccttctctttattgaggatcctgtcacgaatctctggactatattcttgagatcagtgaaggcaggtatagagctcagagttgcaaagctacacttgaacttctttccccactgccaaagaaactgactggagagtgctctgtcagagagatattcaatcttcttctgatattctgtggggaagtgctctgggtccagattcctctgtcagattgaaagttttcaagtcagtcaatcatggatctcttgctcattgcacagccggtgtaaactggagatctgttgatgatggaacatcttttgatattgatgaagatatattaagtttgaaaaagtgactagagtactaaacaaagttgccttggagatggtgttgaacataaagcagttgataatatttaccagatactatatcaaaagattttgaaaattatccaggtgcaaaactaaggcattgcagaagtcaaaaattttgtcaagatatccagaaaaatcttcattgaccaaggacatcttatggatcataaatagtagttggagtagttcattccgaatttttcatatttataattttgacaatactccggtaagttttttagtcttattcgataaccatagcatactataacaggatttctactttggaattttattactacgaatatttattttgtgaaataagttgtttggaccgatttttaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="+" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="98022" stop="99868"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98322" g_stop="98407" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98408" i_stop="98497" i_length="90">
            <donor d_prob="0.595" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98498" g_stop="98551" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="140" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98552" i_stop="98904" i_length="353">
            <donor d_prob="0.930" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98905" g_stop="99568" g_length="664"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="804" r_length="664" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="+" ref_id="SGN-U585148" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>804</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U585148" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98322" e_stop="98407"/>
          <exon e_start="98498" e_stop="98551"/>
          <exon e_start="98905" e_stop="99568"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTGGTTCATTTTTTTTCCATGTGAGATTTGCAATCAAATTGGCTGAAATGATGTGTAGCATTTTACTCTCTGTTGGCACCATTGGTACTGATTGTGTTAATCTCATAAGGCTACTTTGATGTGTTTTACAGGAATTTCTTGTGGTCACTAAATGGTTTTTAATGTTACTTGTAGGATTGGCACCTCGTCCTTCTCTTTATTGAGGATCCTGTCACGAATCTCTGGACTGTAAGTACCGGTGAGAGCATGCTCTATCGACATTTTTATGCAACATAACTTTGCATTCATGGCATTTGATGTTATTTGTACATGTGGCTTTGTCCACTCCACATTCCCTTTCCTGTTGGCTGCAGCCACCACCTGCTGCCCTAAAAGGGGGACCAATTGTGGAAAGGTTGGTTGGTGGAAGAAAGAGTTACTTATGCATCAGATGGTGCAAATCATTTGAGTGTTACGCCATCGTGTAGTTTTATCACTTTCTTTTCTCTTAAGCTACTTGGATTTGGAAAACTTAGATCAGAAAATAGCTGTTGAAGTATCCTCCTCATCTGATGCTGTCCCATTCACTGCTCCCCTTCCAGATATTCTTGAGATCAGTGAAGGCAGGTATAGAGCTCAGAGTTGCAAAGCTACACTTGAACTTCTTTCCCCACTGCCAAAGAAACTGACTGGAGAGTGCTCTGTCAGAGAGATATTCAATCTTCTTCTGATATTCTGTGGGGAAGTGCTCTGGGTCCAGATTCCTCTGTCAGATTGAAAGTTTTCAAGTCAGTCAATCATGGATCTCTTGCTCATTGCACAGCCGGTGTAAACTGGAGATCTGTTGATGATGGAACATCTTTTGATATTGATGAAGATATATTAAGTTTGAAAAAGTGACTAGAGTACTAAACAAAGTTGCCTTGGAGATGGTGTTGAACATAAAGCAGTTGATAATATTTACCAGATACTATATCAAAAGATTTTGAAAATTATCCAGGTGCAAAACTAAGGCATTGCAGAAGTCAAAAATTTTGTCAAGATATCCAGAAAAATCTTCATTGACCAAGGACATCTTATGGATCATAAATAGTAGTTGGAGTAGTTCATTCCGAATTTTTCATATTTATAATTTTGACAATACTCCGGTAAGTTTTTTAGTCTTATTCGATAACCATAGCATACTATAACAGGATTTCTACTTTGTAATTTTATTACTACGAATATTTATTTTGTGAAATAAGTTGTTTGGACCGATTTTTAAGC</genome_strand>
        <mrna_strand>CACTGGTTCATTTTTTTTCCATGTGAGATTTGCAATCAAATTGGCTGAAATGATGTGTAGCATTTTACTCTCTGTTGGCACCATTG..........................................................................................GATTGGCACCTCGTCCTTCTCTTTATTGAGGATCCTGTCACGAATCTCTGGACT.................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGAGATCAGTGAAGGCAGGTATAGAGCTCAGAGTTGCAAAGCTACACTTGAACTTCTTTCCCCACTGCCAAAGAAACTGACTGGAGAGTGCTCTGTCAGAGAGATATTCAATCTTCTTCTGATATTCTGTGGGGAAGTGCTCTGGGTCCAGATTCCTCTGTCAGATTGAAAGTTTTCAAGTCAGTCAATCATGGATCTCTTGCTCATTGCACAGCCGGTGTAAACTGGAGATCTGTTGATGATGGAACATCTTTTGATATTGATGAAGATATATTAAGTTTGAAAAAGTGACTAGAGTACTAAACAAAGTTGCCTTGGAGATGGTGTTGAACATAAAGCAGTTGATAATATTTACCAGATACTATATCAAAAGATTTTGAAAATTATCCAGGTGCAAAACTAAGGCATTGCAGAAGTCAAAAATTTTGTCAAGATATCCAGAAAAATCTTCATTGACCAAGGACATCTTATGGATCATAAATAGTAGTTGGAGTAGTTCATTCCGAATTTTTCATATTTATAATTTTGACAATACTCCGGTAAGTTTTTTAGTCTTATTCGATAACCATAGCATACTATAACAGGATTTCTACTTTGGAATTTTATTACTACGAATATTTATTTTGTGAAATAAGTTGTTTGGACCGATTTTTAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U595208" ref_strand="+" ref_description="SGN-U595208 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ctgactggagagtgctctgtcagagagatattcaatcttcttctgatattctgtggggaagtgctctgggtccagattcctctgtcagattgaaagttttcaagtcagtcaatcatggatctcttgctcattgcacagccggtgtaaactggagatctgttgatgatggaacatcttttgatattgatgaagatatattaagtttgaaaaagtgactagagtactaaacaaagttgccttggagatggtgttgaacataaagcagttgataatatttaccagatactatatcaaaagattttgaaaattatccaggtgcaaaactaaaggattgcagaagtcaaaaattttgtccagatattcaaaaaaatcttcattgaccaaggacatcttatggatcataaataataattggaataattcattcccaaattttcctaattataaatttgaccatactcccggaaggtttttaatcttattccataaccctaacatactattaccagatttccactttggaattttattaccaccaatatttattttgtgaaataaattggttggaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="+" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="98688" stop="99857"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98988" g_stop="99558" g_length="571"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="571" r_length="571" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="+" ref_id="SGN-U595208" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>571</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U595208" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98988" e_stop="99558"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGACTGGAGAGTGCTCTGTCAGAGAGATATTCAATCTTCTTCTGATATTCTGTGGGGAAGTGCTCTGGGTCCAGATTCCTCTGTCAGATTGAAAGTTTTCAAGTCAGTCAATCATGGATCTCTTGCTCATTGCACAGCCGGTGTAAACTGGAGATCTGTTGATGATGGAACATCTTTTGATATTGATGAAGATATATTAAGTTTGAAAAAGTGACTAGAGTACTAAACAAAGTTGCCTTGGAGATGGTGTTGAACATAAAGCAGTTGATAATATTTACCAGATACTATATCAAAAGATTTTGAAAATTATCCAGGTGCAAAACTAAGGCATTGCAGAAGTCAAAAATTTTGTCAAGATATCCAGAAAAATCTTCATTGACCAAGGACATCTTATGGATCATAAATAGTAGTTGGAGTAGTTCATTCCGAATTTTTCATATTTATAATTTTGACAATACTCCGGTAAGTTTTTTAGTCTTATTCGATAACCATAGCATACTATAACAGGATTTCTACTTTGTAATTTTATTACTACGAATATTTATTTTGTGAAATAAGTTGTTTGGACCG</genome_strand>
        <mrna_strand>CTGACTGGAGAGTGCTCTGTCAGAGAGATATTCAATCTTCTTCTGATATTCTGTGGGGAAGTGCTCTGGGTCCAGATTCCTCTGTCAGATTGAAAGTTTTCAAGTCAGTCAATCATGGATCTCTTGCTCATTGCACAGCCGGTGTAAACTGGAGATCTGTTGATGATGGAACATCTTTTGATATTGATGAAGATATATTAAGTTTGAAAAAGTGACTAGAGTACTAAACAAAGTTGCCTTGGAGATGGTGTTGAACATAAAGCAGTTGATAATATTTACCAGATACTATATCAAAAGATTTTGAAAATTATCCAGGTGCAAAACTAAAGGATTGCAGAAGTCAAAAATTTTGTCCAGATATTCAAAAAAATCTTCATTGACCAAGGACATCTTATGGATCATAAATAATAATTGGAATAATTCATTCCCAAATTTTCCTAATTATAAATTTGACCATACTCCCGGAAGGTTTTTAATCTTATTCCATAACCCTAACATACTATTACCAGATTTCCACTTTGGAATTTTATTACCACCAATATTTATTTTGTGAAATAAATTGGTTGGAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U575440" ref_strand="+" ref_description="SGN-U575440 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157341025|emb|CAO47830.1| (e_value=7e-108) unnamed; (*ATH) AT4G36945.1 (e_value=7e-107) |; (*SWP) sp|Q93XX5|Y5713_ARATH (e_value=4e-89) PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130; ">
      <seq>caggaagaacctcagagcctacatgatgaaggagatcatccgtctacctatgaagtttcttattctctgtatcaccgtttctatcttattccaacattgttcttgcctaaagattggagaaacttgtaccgacagtaattgtgatgaaggattagtatgctctacttgtcctgctaatggcaatacccgacccagatgtactcgcattcaacccactattcctaccaccaaggtaaaaggtttgccattcaacaagtattcgtggctgacgacccacaactcctttgcaatttccgggtcaacatctgcaactgggtctgatattcttgctccgaccaaccaggaagattccattactaatcagctcaagaatggcgttcgaggacttatgcttgatatgtatgatttcaacaatgacatctggctttgtcactcatttggtgggaagtgttacaatgttacatcatttcaacctgcaatcaattcactgaaagaaattcaagggttcctcgaaaagaacccatcagaggtcgtcacaatcttcattgaagactatgtctcaaccccaaaggccttgagcaaggtttttaatgattctggtcttaataagtactggtttccaatttctcgtatgcccaaaaaaggagaagattggcctacagtggatgacatggtcaagcagaatcaacgtcttgtagtcttcacctctaaatcatcaaaggaggcttctgatggcattgcttatgagtggagatacgttgtagaaaaccaatatggaaatgacgggatgaaagaaggttcttgtccaagtcgttctgaatcatctgctttgagtacatcgggaatctctttggttctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="+" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="99972" stop="102832"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100271" g_stop="100302" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="0.938"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100303" i_stop="100406" i_length="104">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100407" g_stop="100487" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="112" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100488" i_stop="100596" i_length="109">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="100597" g_stop="100716" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="232" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="100717" i_stop="100816" i_length="100">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="100817" g_stop="100954" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="370" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="100955" i_stop="101568" i_length="614">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="101569" g_stop="101667" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="371" r_stop="469" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="101668" i_stop="101775" i_length="108">
            <donor d_prob="0.609" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="101776" g_stop="102079" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="470" r_stop="773" r_length="304" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="102080" i_stop="102445" i_length="366">
            <donor d_prob="0.809" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="102446" g_stop="102532" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="774" r_stop="860" r_length="87" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="+" ref_id="SGN-U575440" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>861</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U575440" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100271" e_stop="100302"/>
          <exon e_start="100407" e_stop="100487"/>
          <exon e_start="100597" e_stop="100716"/>
          <exon e_start="100817" e_stop="100954"/>
          <exon e_start="101569" e_stop="101667"/>
          <exon e_start="101776" e_stop="102079"/>
          <exon e_start="102446" e_stop="102532"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAGAAGAACCTCAGAGCCTACATGATGAAGGCATGCAATCTCTTAATCTCAATTTCTTACTGCTAATTACTCTTAATTATCTCAAATTCTCATAATGAAAAAATCTTTGCATTTATTTATTTTCTATTTTGCAGGAGATCATCCGTCTACCTATGAAGTTTCTTATTCTCTGTATCACCGTTTCTATCTTATTCCAACATTGTTCTTGCCTAAAGGTAATTTATTGATTATGTTGTTCTTAAACAGTTCATTATCTTAATTAGATCTCACTTAAGATCGCATTCATGAATTTGTTATTTGTTTTGGATATTTGATTAATCACAGATTGGAGAAACTTGTACCGACAGTAATTGTGATGAAGGATTAGTATGCTCTACTTGTCCTGCTAATGGCAATACCCGACCCAGATGTACTCGCATTCAACCCACTATTCCTACCACCAAGGTGAATTTCATATATTATAAGTCCAATTCTAACTATTTCATTTTTTTTCTTTTTTCATTAATGGTATATTGAATTTTTTACTTTTATTTGTGGTTGAAAGGTAAAAGGTTTGCCATTCAACAAGTATTCGTGGCTGACGACCCACAACTCCTTTGCAATTTCCGGGTCAACATCTGCAACTGGGTCTGATATTCTTGCTCCGACCAACCAGGAAGATTCCATTACTAATCAGCTCAAGGTGATTTTCTCTTTCTCTAATTATGAATTGAATATTTGAGGAATTTTAGTAGTTCAATTGATTGACTAGCTAAATGTAGCGTTCAAAAAGTTGTTGTGGAAGAAAAAAAGTTGAACAGCTGAATGTAATGGAATATCTAACTCTAAAAGATGAACTCTTTTAGGTACGAGAGAGAAAAAAGTCAGATTAGATTGGTAATATATAATTGCAAAAAACTCATATTTTACTTTGCTTAGGACATAAGCATGTGCTTTCACCTAACGATCTTATCAAAATTGTCCACATGCTAATGTCCTAATTTAGTTCTCAGTGGAGTCTATGTATCAAAATTATGAGATAAAATTGCTACCTTTATTCCCCACTACTTTTTCTATGTAAAGATCTTTCGAGCCTTGAAAGAATTTGTTTTTGGAAAATTCAGAGCTGTGTGATTCAACTAACCTGAGAATTACTTCAGTAAAAAAGTAAAATATGCTATCGGTAAATATATAGTGACCATTTCAGGAAGTACTCTGATTTTACTACGTTAACTTAAGCAGAGAAGTCATTAGCTTCTTAAGTTCTGATATTATTAAAGTGAAAACTCTGCTAAAGAAATTGATTGATATCTGTAGAATGGCGTTCGAGGACTTATGCTTGATATGTATGATTTCAACAATGACATCTGGCTTTGTCACTCATTTGGTGGGAAGTGTTACAATGTTACATCATTTGTAAGTTTACTAACACATATTGCTAGGTTTACTTGATTACCTGATTCGGTACTCATATAGCATTCTTGTTATTGCTGATTGGTGCAACTTACTTTCTGGATGATTCAGCAACCTGCAATCAATTCACTGAAAGAAATTCAAGGGTTCCTCGAAAAGAACCCATCAGAGGTCGTCACAATCTTCATTGAAGACTATGTCTCAACCCCAAAGGCCTTGAGCAAGGTTTTTAATGATTCTGGTCTTAATAAGTACTGGTTTCCAATTTCTCGTATGCCCAAAAAAGGAGAAGATTGGCCTACAGTGGATGACATGGTCAAGCAGAATCAACGTCTTGTAGTCTTCACCTCTAAATCATCAAAGGAGGCTTCTGATGGCATTGCTTATGAGTGGAGATACGTTGTAGAAAACCAATGTGAGTTAACAGCTTTTGTCTAATTTGATGCTTATGTTGCTTTCCGCTTTCCTGGTATGACATACTTAGTGAATCTAGAATTGTTTACATTCGCGATTTAATTAGCAGCTCCTGTGAGATCAACTTATGTTGAATTGCATTTAATTTTCAAGTATTTGAAGAGGCAAATGCTTCAGAACTAGTCTAGGAGCCTTATGCCAATTAACATCGTTTTTTGGTTTCTGAATGACATAAGTTGGTCCTTGAGTAAATTTTCTTATATTTGCAAGTTGCAACTTCACTTGCTCATCTTTCTTACATTTGGTATCATCAGACATGGTTGCTCAAACTATTGATGACTTGACATGTTTACTGTATGTTCTGCAGATGGAAATGACGGGATGAAAGAAGGTTCTTGTCCAAGTCGTTCTGAATCATCTGCTTTGAGTACATCGGGAATCTCTTTGGTTCTGC</genome_strand>
        <mrna_strand>CAG-GAAGAACCTCAGAGCCTACATGATGAAG........................................................................................................GAGATCATCCGTCTACCTATGAAGTTTCTTATTCTCTGTATCACCGTTTCTATCTTATTCCAACATTGTTCTTGCCTAAAG.............................................................................................................ATTGGAGAAACTTGTACCGACAGTAATTGTGATGAAGGATTAGTATGCTCTACTTGTCCTGCTAATGGCAATACCCGACCCAGATGTACTCGCATTCAACCCACTATTCCTACCACCAAG....................................................................................................GTAAAAGGTTTGCCATTCAACAAGTATTCGTGGCTGACGACCCACAACTCCTTTGCAATTTCCGGGTCAACATCTGCAACTGGGTCTGATATTCTTGCTCCGACCAACCAGGAAGATTCCATTACTAATCAGCTCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGCGTTCGAGGACTTATGCTTGATATGTATGATTTCAACAATGACATCTGGCTTTGTCACTCATTTGGTGGGAAGTGTTACAATGTTACATCATTT............................................................................................................CAACCTGCAATCAATTCACTGAAAGAAATTCAAGGGTTCCTCGAAAAGAACCCATCAGAGGTCGTCACAATCTTCATTGAAGACTATGTCTCAACCCCAAAGGCCTTGAGCAAGGTTTTTAATGATTCTGGTCTTAATAAGTACTGGTTTCCAATTTCTCGTATGCCCAAAAAAGGAGAAGATTGGCCTACAGTGGATGACATGGTCAAGCAGAATCAACGTCTTGTAGTCTTCACCTCTAAATCATCAAAGGAGGCTTCTGATGGCATTGCTTATGAGTGGAGATACGTTGTAGAAAACCAAT..............................................................................................................................................................................................................................................................................................................................................................................ATGGAAATGACGGGATGAAAGAAGGTTCTTGTCCAAGTCGTTCTGAATCATCTGCTTTGAGTACATCGGGAATCTCTTTGGTTCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U585459" ref_strand="+" ref_description="SGN-U585459 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|157345138|emb|CAO71866.1| (e_value=1e-133) unnamed; (*ATH) AT5G67100.1 (e_value=5e-104)  Symbol: None | DNA-directed DNA polymerase alpha catalytic subunit, putative, similar to SP:O48653 DNA polymerase alpha catalytic subunit (EC 2.7.7.7) {Oryza sativa}; contains Pfam profiles: PF03175 DNA polymerase type B, organellar and viral, PF001... ; (*SWP) sp|O48653|DPOLA_ORYSJ (e_value=8e-123) DNA polymerase alpha catalytic subunit OS=Oryza sativa subsp. japonica GN=Os01g0868300; ">
      <seq>gccttagccaaatactgtccggcgggtcctgtgaagatgtcattgaatcaatacataatgcacttatgaaggtacaagagcaaatgaggactggccaaattgagctggaaaaatacgtgatcaccaaatcattgactaaacctcctgaagcctatcctgatgctaaaagtcaacctcacgttgaagtagcactcaggttgaagaaaagtggctatgttactggttgctctgctggtgatacagtaccatatgtcatctgttgtgaacagggtaatggttcaactacctctgtgggaattgctcagcgggcaagacatcctgatgaactgaaaagagacaatggaaactggatagtagacattgattattaccttgcccaacagatacatcctgtaatatcccgtctatgtgcgtcaattcagggtactagcccagcacgtctggctgattgcttaggactagattcatccaagttccaaaataaatcaagtgaagctgtcaatgatgatccctcaaatgcacttttatgtgtagctgatgatgaagagagatttcggggttgtgagcctttgactttgacatgccccagctgctcctgctcttttgagtgtgcacctatatttagttccatatgttcatcaattaggcaaaatccagcagacttgcaagtaggagagtctgccagcaaagtctgggaaagatttagttgtcccaaatgcccagaggagagtgaggggaatatatcttcggcattgatagcaaaccaggttaaaaggcaagtagaaggctttatttcaacatattacaaaggagttatgatgtgcgatgatgaaacctgcaactacaccactcgtagcctgaacctgcgagtaattggggactcagagagaggaactgtttgtccaaattatcctcgttgtaatggacacttacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="+" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="114208" stop="117651"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114508" g_stop="114532" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="114533" i_stop="114624" i_length="92">
            <donor d_prob="0.992" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="114625" g_stop="114670" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="71" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="114671" i_stop="115176" i_length="506">
            <donor d_prob="0.877" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="115177" g_stop="115290" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="185" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="115291" i_stop="115372" i_length="82">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="115373" g_stop="115456" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="269" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="115457" i_stop="115553" i_length="97">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="115554" g_stop="115667" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="383" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="115668" i_stop="115777" i_length="110">
            <donor d_prob="0.864" d_score="1.00"/>
            <acceptor a_prob="0.181" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="115778" g_stop="115867" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="473" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="115868" i_stop="115951" i_length="84">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.947" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="115952" g_stop="116028" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="474" r_stop="550" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="116029" i_stop="116335" i_length="307">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="116336" g_stop="116552" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="551" r_stop="767" r_length="217" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="116553" i_stop="117099" i_length="547">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.829" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="117100" g_stop="117153" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="768" r_stop="821" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="117154" i_stop="117237" i_length="84">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.863" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="117238" g_stop="117351" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="822" r_stop="935" r_length="114" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="+" ref_id="SGN-U585459" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>935</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U585459" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114508" e_stop="114532"/>
          <exon e_start="114625" e_stop="114670"/>
          <exon e_start="115177" e_stop="115290"/>
          <exon e_start="115373" e_stop="115456"/>
          <exon e_start="115554" e_stop="115667"/>
          <exon e_start="115778" e_stop="115867"/>
          <exon e_start="115952" e_stop="116028"/>
          <exon e_start="116336" e_stop="116552"/>
          <exon e_start="117100" e_stop="117153"/>
          <exon e_start="117238" e_stop="117351"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTTAGCCAAATACTGTCCGGCGGGTACATCTTGCTGTGAACTTGTTTCTTCTCTTCATATCATCATACTTGTGATTGCTCAGTCTGAATGATTTACATGTCTTTAATGGTGGCAGGTCCTGTGAAGATGTCATTGAATCAATACATAATGCACTTATGAAGGTATCACTCTCAATGATATTGAAAATCATAAGCCAGGAGCTGCAATGGCTCTGCAGCTTTCATATTGAATGCGGTTTAGTTTATATTGCAGGCTATATTCTTGATCAAAAAAATTTATAGGCTACTCTTTAGGATTGAGAATATTTCCAGGAGTGACTCTTAGCTTATGGCTTCTTTTCATGGAGTTCCACCAGTAGGGTTCCCCCTCCCCCCAGCCAGTCTCCCCCCACTGGCTCTCCTTACCTCAATCATTGAGCAGCTACTGCTTTCTACCATAAATCCTCTGTGTATCTCCACTATTGTCTTGCTAGTGCATTGTTCCGAAATTTGCTGGGCAGCCTGGAATCTTCATATACAGTCAGTCTTCTTCATTCTGGTTGAAGGAAAATCCAGCTGCTACTCTTAGCACCTGGAGAGGCAATCAGCTCATTTTAGTTTGATTTTTGTGATGTAGGCCTATTACTAGTTTCCTATGATTATTCTTGAATTTCTCTGATCTACTGCAGGTACAAGAGCAAATGAGGACTGGCCAAATTGAGCTGGAAAAATACGTGATCACCAAATCATTGACTAAACCTCCTGAAGCCTATCCTGATGCTAAAAGTCAACCTCACGTTGAAGTAAGTTTTAAGAAGTCTTTGATCAATTCATGTCTCAGACTAAGGAACTGAGAGTTAATATTGTCATCCTCTACATCTGTAGGTAGCACTCAGGTTGAAGAAAAGTGGCTATGTTACTGGTTGCTCTGCTGGTGATACAGTACCATATGTCATCTGTTGTGAACAGGTTTATTTCCTATTATTAATGGTCCAATACGATGAAATCCAGTTTTTCTCTTTTGGTTTCTGTTGTCTTAACATGCAGGTGTTACACACACTTGCAGGGTAATGGTTCAACTACCTCTGTGGGAATTGCTCAGCGGGCAAGACATCCTGATGAACTGAAAAGAGACAATGGAAACTGGATAGTAGACATTGATTATTACCTTGCCCAACAGGTCTTCGTAGTCTACTTATTTTGATCTTCAATTTTAAATCGCTATCGTTGGTTCTTATGCGTGCATATCTCGCGACTCCACCTAACTGTGAACCATTTTCAATGTCACAGATACATCCTGTAATATCCCGTCTATGTGCGTCAATTCAGGGTACTAGCCCAGCACGTCTGGCTGATTGCTTAGGACTAGATTCATCCAAGGTAAATAGCAACTTTTCAAAACGGACATTAATTCAACATGACATGATTTTGAAAAATAGCTTAAGGGTTTGACTTTTCCTTCAGTTCCAAAATAAATCAAGTGAAGCTGTCAATGATGATCCCTCAAATGCACTTTTATGTGTAGCTGATGATGAAGAGAGGTAATTGATCTCTTTCAGAGAAAGTTTACCTTTCCTTTTATCTTTTGTTCAGGTTGAAGATGCTTTTCTTTCATATACTCAACTCATCCTAATTACTGTTTTGTGCAATCTCAGTCTTTCCTCGTTCTCTCTCTTATTTCTTTGAACTCTTATTTGTTTCAATTTTCTTTATGGTATCAGTTTCCTTCCACACTTTTTCTGCTTCACCTCTCTACCCCCCTAACTTTCCCATTTTTTTGTTCACATTTTGATATGCTAACTTCTCCACTGTATGAACATATTTTTCTTCTGACAATGCAAAATGCAGATTTCGGGGTTGTGAGCCTTTGACTTTGACATGCCCCAGCTGCTCCTGCTCTTTTGAGTGTGCACCTATATTTAGTTCCATATGTTCATCAATTAGGCAAAATCCAGCAGACTTGCAAGTAGGAGAGTCTGCCAGCAAAGTCTGGGAAAGATTTAGTTGTCCCAAATGCCCAGAGGAGAGTGAGGGGAATATATCTTCGGCATTGATAGCAAACCAGGTATGTGTTTTGACTTTCAACTGAACTTTGTACAATTATGTCAACTACTTTTTGTCCTCTGCTTTCTGTCATCTAAAATGTTGGAACACGTAATCATGTAGAACTGCCTTAGTACTGTCGATTTTCTTTACAACTGATATGATTTCGTTCTCAGTATGAGTATAGATGGCCATGAATTGTTTTCAGCCTTTAGGTTGTCTTGTGGTTACACCAAGTCACCTACAAGACTAACATCTCTAGATTCTCTCAATTGAAACCTTTACTTTTGTGGTTCTCTTGGTGTCATTTTAGCCTTCTTCCCCCAAATTAGTGAACCAGGTTCATTTTTCTTGCGTTCTCAACCTTCCATTTCCATGTTTCCACTTGTCTTTGGCAATCATCATCTTTTTGAAGTCAGAACCGTGTGTTAAATACACTTATTTAAGGATATTTTGTGTTATTTTCTCGTTCTTTTGAAGAAGGATCTCGATTTACATATATACAATATGTAAGTAGTGACAGGCTGGTATGTACGCTTAGATTCGTGTTGTCATGTCACCCTTGACAGGTTAAAAGGCAAGTAGAAGGCTTTATTTCAACATATTACAAAGGAGTTATGATGGTATGTGCTTAAATATTTTACAGCTATTGCTTTGATGAGCTTGCTGGACAGCACAGTTAACTAAAGCTATTTTGTTCTGTTCAGTGCGATGATGAAACCTGCAACTACACCACTCGTAGCCTGAACCTGCGAGTAATTGGGGACTCAGAGAGAGGAACTGTTTGTCCAAATTATCCTCGTTGTAATGGACACTTACTA</genome_strand>
        <mrna_strand>GCCTTAGCCAAATACTGTCCGGCGG............................................................................................GTCCTGTGAAGATGTCATTGAATCAATACATAATGCACTTATGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAAGAGCAAATGAGGACTGGCCAAATTGAGCTGGAAAAATACGTGATCACCAAATCATTGACTAAACCTCCTGAAGCCTATCCTGATGCTAAAAGTCAACCTCACGTTGAA..................................................................................GTAGCACTCAGGTTGAAGAAAAGTGGCTATGTTACTGGTTGCTCTGCTGGTGATACAGTACCATATGTCATCTGTTGTGAACAG.................................................................................................GGTAATGGTTCAACTACCTCTGTGGGAATTGCTCAGCGGGCAAGACATCCTGATGAACTGAAAAGAGACAATGGAAACTGGATAGTAGACATTGATTATTACCTTGCCCAACAG..............................................................................................................ATACATCCTGTAATATCCCGTCTATGTGCGTCAATTCAGGGTACTAGCCCAGCACGTCTGGCTGATTGCTTAGGACTAGATTCATCCAAG....................................................................................TTCCAAAATAAATCAAGTGAAGCTGTCAATGATGATCCCTCAAATGCACTTTTATGTGTAGCTGATGATGAAGAGAG...................................................................................................................................................................................................................................................................................................................ATTTCGGGGTTGTGAGCCTTTGACTTTGACATGCCCCAGCTGCTCCTGCTCTTTTGAGTGTGCACCTATATTTAGTTCCATATGTTCATCAATTAGGCAAAATCCAGCAGACTTGCAAGTAGGAGAGTCTGCCAGCAAAGTCTGGGAAAGATTTAGTTGTCCCAAATGCCCAGAGGAGAGTGAGGGGAATATATCTTCGGCATTGATAGCAAACCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAAGGCAAGTAGAAGGCTTTATTTCAACATATTACAAAGGAGTTATGATG....................................................................................TGCGATGATGAAACCTGCAACTACACCACTCGTAGCCTGAACCTGCGAGTAATTGGGGACTCAGAGAGAGGAACTGTTTGTCCAAATTATCCTCGTTGTAATGGACACTTACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570916" ref_strand="+" ref_description="SGN-U570916 Tomato 200607#2 [19 ESTs aligned] (*GB) gi|157345139|emb|CAO71867.1| (e_value=0) unnamed; (*ATH) AT2G23420.1 (e_value=0) | Symbol: None | nicotinate phosphoribosyltransferase family protein / NAPRTase family protein, contains Pfam domain PF04095: Nicotinate phosphoribosyltransferase (NAPRTase) | chr2:9978845-9982272 FORWARD | Aliases: F26B6.7, F26B6_7; (*SWP) sp|Q9VQX4|PNCB_DROME (e_value=0) Nicotinate phosphoribosyltransferase OS=Drosophila melanogaster GN=CG3714; ">
      <seq>ctatatattcttaacaacttcgtttgtaacggtctcaacatattctctctgttctgtaaaaccgaattgctgctaaccctaggatttatggctgaaactatacctaatggcgggcctgagagtgccaatattgatggaccgaccaatcctatggttacgcctattttaacagatctctatcagtttactatggcctatgcttactggaaagctggaaaacacaatgaacgagctgtgtttgacttgtattttcggaggaatccgtttggtggtgaatatacaatatttgctggtttagaagagtgcataaagtttattgctaattttaaatttactgaggatgagatagctttcatcaggtcatcgttgccatcgtcatgtgaggatggcttctttgaataccttcgaagacttgactgttcagatattgagatatattctatttctgaaggatcagtagtttttcccaaggtaccgctgatgaggattgaaggaccagttgctgtggttcaactactggaaacaccatttgtaaacctcataaattatgcatcactagttactactaatgctgcaagacaccgtttcgttgctggaaggtccaaaatattgcttgaatttgggcttaggagagcacagggtcctgatggtggtatatcagcatccaagtattgctacatgggtggatttgatgcgacaagcaatgtggcagctggaaagctgtttggaatcccactccgtgggacacattcccatgcctttgttagctcatttctgagcccagatgagatcatagagaaatcacttcaacatcataatggttctagtgtttgtgaggattttgttagtctggtacagacatggcttgataaattaaagtggtcacacttattgggtggaattttcagcgagacaaatcaaagtgagttagccgctttcgcctcgtatgcacttgcatttcctggaagttttttggcccttgtagacacttatgatgtcatgagaagtggtcttccaaatttttgtgcagttgctcttgcacttaatgatttggggtataaagcagtgggcattagactagactctggtgatcttgcttatcagtcatgtgaagctaggaaattcttttgtgctattgagaaagaatttggattgcctggttttgcaaagacgagtatcacagctagcaatgatcttaatgaagaaactctggatgcactaaataaacaaggtcacgaggttgatgcatttggtattggtactcatttagttacctgttatgctcaagctgctcttggtgttgttttcaagttagttgaaataaacaatcagcctagaatcaaactctctgaagacgtatcaaaggtctctattccatgcaaaaagcggtgttacagattgtatgggaaggaagggtacccccttgtagacataatgactggtgaaaatgagccacatcccaaggtaggtgaacgaattttatgccgccacccatttagtgaatctaaaagggcatacgtagtgccccagcgtgttgaggaacttttaaagtgtttttggcccggaaagtcagctaaaacaagagaagaccttcctcctctgaaggagatcagggaaagatgtattgcacaactggaccaaatgcgaccagatcacatgagaaggctgaacccaacaccatacaaggtcagtgtgagtgcaaagttgtatgatttcatccatttcctctggctcaatgaagcacctgttggagagttgcagtgaaccatgaatgagaagtttgggagtcttctaggtttcttgtgcatctttttcatcatgtaaactgaaattttacataaagttattaaccaaagagaagtccgttctttactttttccccccagtgatgttccgaggcaattgtataagcttccttggaagtttgtaaaggtcaataaaagtgcatttgtattttcctctcaattgagtcctcagaaatgcgtggataaaactgggtgaaacccatgtgcaccttatagttgtgattaatgtaactgagccaaattattgtgactagaaaaggtttcagtaatgattatggaatttcattcttctgaaattgctctgctagttggttctccttgccaactacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="-" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="126158" stop="117540"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125858" g_stop="125623" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="236" r_length="236" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125622" i_stop="125511" i_length="112">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="125510" g_stop="125363" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="384" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="125362" i_stop="124488" i_length="875">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.928" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="124487" g_stop="124368" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="385" r_stop="504" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="124367" i_stop="124248" i_length="120">
            <donor d_prob="0.774" d_score="1.00"/>
            <acceptor a_prob="0.879" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="124247" g_stop="124113" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="639" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="124112" i_stop="124033" i_length="80">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="124032" g_stop="123971" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="640" r_stop="701" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="123970" i_stop="123624" i_length="347">
            <donor d_prob="0.950" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="123623" g_stop="123548" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="702" r_stop="777" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="123547" i_stop="122657" i_length="891">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="122656" g_stop="122555" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="778" r_stop="879" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="122554" i_stop="121695" i_length="860">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="121694" g_stop="121578" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="880" r_stop="996" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="121577" i_stop="121275" i_length="303">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="121274" g_stop="121216" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="997" r_stop="1055" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="121215" i_stop="120188" i_length="1028">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="120187" g_stop="120013" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="1056" r_stop="1230" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="120012" i_stop="119424" i_length="589">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="119423" g_stop="119289" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1231" r_stop="1365" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="119288" i_stop="119218" i_length="71">
            <donor d_prob="0.893" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="119217" g_stop="119119" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1366" r_stop="1464" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="119118" i_stop="118975" i_length="144">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="118974" g_stop="118866" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="1465" r_stop="1573" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="118865" i_stop="118637" i_length="229">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.883" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="118636" g_stop="118524" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="1574" r_stop="1686" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="118523" i_stop="118290" i_length="234">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="118289" g_stop="117840" g_length="450"/>
          <reference_exon_boundary r_type="cDNA" r_start="1687" r_stop="2136" r_length="450" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="-" ref_id="SGN-U570916" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2136</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U570916" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125858" e_stop="125623"/>
          <exon e_start="125510" e_stop="125363"/>
          <exon e_start="124487" e_stop="124368"/>
          <exon e_start="124247" e_stop="124113"/>
          <exon e_start="124032" e_stop="123971"/>
          <exon e_start="123623" e_stop="123548"/>
          <exon e_start="122656" e_stop="122555"/>
          <exon e_start="121694" e_stop="121578"/>
          <exon e_start="121274" e_stop="121216"/>
          <exon e_start="120187" e_stop="120013"/>
          <exon e_start="119423" e_stop="119289"/>
          <exon e_start="119217" e_stop="119119"/>
          <exon e_start="118974" e_stop="118866"/>
          <exon e_start="118636" e_stop="118524"/>
          <exon e_start="118289" e_stop="117840"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATATATTCTTAACAACTTCGTTTGTAACGGTCTCAACATATTCTCTCTGTTCTGTAAAACCGAATTGCTGCTAACCCTAGGATTTATGGCTGAAACTATACCTAATGGCGGGCCTGAGAGTGCCAATATTGATGGACCGACCAATCCTATGGTTACGCCTATTTTAACAGATCTCTATCAGTTTACTATGGCCTATGCTTACTGGAAAGCTGGAAAACACAATGAACGAGCTGTGTAAGTATTCAATTTCCATTTTTATTCCTCTTCATTTTCACTCTAGTTAGTTTCATTTGATGTTCTGATCATGATGTTTACTTCAAGCGGATTAATTTGATTGTTTGCTCAGGTTTGACTTGTATTTTCGGAGGAATCCGTTTGGTGGTGAATATACAATATTTGCTGGTTTAGAAGAGTGCATAAAGTTTATTGCTAATTTTAAATTTACTGAGGATGAGATAGCTTTCATCAGGTCATCGTTGCCATCGTCATGTGAGGTAAAGTTGTTATTAACAAGCAAATATGGAGACATTATGTGGTGAAAATCAAGATAGCAAGATTGATATCAAGAATGGTCTCTTTTAATGAATCTTTCATGATACGTTGAGCCCTTTGTGGGTGATTGGAAACTTTCATATCCAAGATGGACCACAACCCCATTCTTGATATCAATCTTGCTATCTTGATTTGCACCACATATGTGTTGAACTTTTTGTGCTGATATATTGAATTCTGCTATCTGAATTAAGATATCATGTGGTCATTTGTTTATCCTTTACTCCTTTTCTATTATCCTCTGTTTTTGGATCTTTCTAAGGGTATTATTCAAATCGCCTGTAAAATTTGGGAACAAATGCTTTCTTGATGAGTTTATCTTCCATTGGCCAAAATATGATCATAAACAATTAATGCAACTGTACTTTTTCTTTGGGAATCCCTGCCTATTTCATAAACATGTCATCCCAGTATGTTTGGGATAATCAAGCTGTGACTGATGCTCCATCTGGTCATGCGTTATACTACTTCATCGTTCCATCTTGTTTATTCACTTCTGGTTTGGCACAATTTTAGAACAGAATATTAGTATGCGCTGTTCAATATTTGTTTAGGAGCATGTGGGCCCATAGTTTGACTTCTGTGTTGATGACAAATAGATTAAAAGATGAAATTCGATTGGAAATGTAAAAGTAAATCTTTAATGAAACTATTGTGGTATTTAAAATGTCTTCGCACTTTATACTTATTAAAATTGATTGGGAAATCTAAAAGGGAAAGTATGTGGGAGAATGGAGTGCTTCTTCAGGGAATATGTTTCTGTTTACTTTAAAGAATTTTTTGCTATGCTGAGAGCATATTTAAATGGATTATGTAGGATGGCTTCTTTGAATACCTTCGAAGACTTGACTGTTCAGATATTGAGATATATTCTATTTCTGAAGGATCAGTAGTTTTTCCCAAGGTACCGCTGATGAGGATTGAAGGACCAGTTGCTGTGAGTCACAATAACACTATCCTTTATTAGTGCTTTCTTTTGAAGCATCTCAACAGGGTTGTCTGTTGGATCTTCTCATGTACATCTCTAATAAGCTTAATGATTGCTTGTGTCTCAAAGGTGGTTCAACTACTGGAAACACCATTTGTAAACCTCATAAATTATGCATCACTAGTTACTACTAATGCTGCAAGACACCGTTTCGTTGCTGGAAGGTCCAAAATATTGCTTGAATTTGGGCTTAGGAGAGCACAGGTTGTTTATCTTTCCTATTATCATCTTTATATTTTATACATGTACAAACTGTGAACAAACTTTTGTACCTTCATGAGTAGGGTCCTGATGGTGGTATATCAGCATCCAAGTATTGCTACATGGGTGGATTTGATGCGACAAGGTGATTTCGTGTTTATTTCACTGTGTCTCTATGAAATGCATCATCTACTTATCTTTTTCCAATGATCTAACCAGAAAAATAATCATTCAAGAAAGAATTTGATCCGTAAGATGGATGGTTACAGTTGATAAAAAACTATGGTGTACTTTTACGTTTACATGCTGCATTATGGATTGCTGCAACCTAATGTTATATCTTTTGCTGGTTATGTTTATCATTTTGATAAGGAAATAAAATTTCTTTTTGTAAGTTAGAATGCTGAGACATTATTTTATTCCTGTTGGTGTTTTCTTTCTTTTTAATCATAGCCAAGACTGGAGGTTCACTGTTTCTTTGTGATTTGACAGCAATGTGGCAGCTGGAAAGCTGTTTGGAATCCCACTCCGTGGGACACATTCCCATGCCTTTGTTAGCTCATTTCTGGTAGGTGCAACCTTCAAAGATCTAGTTTATAGTCAAAGCATAGTAAGAAACATGTCTTAGGATAGTAAAGTGCTCCGTTCAAATTCCCATTTTAGTCCCTTATACGAATGTTAGTTTGTCTTCAGTTACTCATCTATTGTTATTATTATCATTTTTCATTATTACAGTCATTTTGAAGGTATAATTACCACATCTATTTGCTTGCTGGCCAACTTAATGTAGACATAATCATTTCATCTGTAACACATTTGATGACAATATTATGAATTTAATACTGAAAAGACGTTCTTGGCTGTTAAACAAATTACTTAAATTGTTTGATAGAGTCATTCACTATTGTAAGTGGAATGCAAGTGGTTTTTTTTGCTCTTATGGCTCCATATGTATTGATAGGGTACATAAATGCTTGTATATACTCAATTGGTTAAGTGACAATTGTAGTTTCTACCTCAATGTCATTGAGTGGCATCAGTTAAATATGTTAGTCAATGCATAATTGCACATAGCTCAATCACTAACTCATATGAAATTATGTGTATTGGAATGGCAAGCTTAGAGCTAATTATTGTTATACATATGATAAAATTATTTTCTGTCCTGACTTATCAAAAAATACATGATCGATTATCCAGGCTTCAGCTAGAATCCTTAGTAGATGTAATTATGAACTCATCATGTCATGTTCTCTGTGGATACTAATTTCAAGTTTTGTTACTATCAATTGTTTTGTCATGTGCACGTTATCTTGCTTATTGATGAATATAAAGACAAGTAAATTAAGTACTCAAATGTTCTGTAGATGCCTAGTATTTCTTTTTCTCTAGATTGTGCACTCAACATCTTCTACTTGCTTGAAGTTATCTGGTATTTAACTTAGTCCTTATGATGCAGAGCCCAGATGAGATCATAGAGAAATCACTTCAACATCATAATGGTTCTAGTGTTTGTGAGGATTTTGTTAGTCTGGTACAGACATGGCTTGATAAATTAAAGGTATTAATCATCTCATTCTTTTGATGCACTAGTTAGATCATCAAAAAAAAAAAAATTATTGAAGTCTTCCATTTGATTTTTTTTCTTGGAATCTGACCATTTCGGTTTATGCATTCTGATAAATCATATTGGTTCTCTATATTGGTATCACCTTTTTCATTTCAAATATCATTTAGCGTTGACTTCAATTTTCACCTTTTCATTTCAATATACTGAACTAAGCTCCTAGTCTTCCTTACCAAACCTGCTCAAAATCCACACCGTCAAGAGCATATGTGGTTTGAGTGACTGTCAGAGTGTCAATTCTTGTCAGTGTTTAATAAAGTAGGCCTAACATAGAAAACCTGAGGGAGTTTATGTTACAATTTGATTGCCAAAAGGGAGTATGATGTATAATTCCTTCATTTAATTCTGCTTAACCCCTATGGATAGCTGAACTCGTAGCCAGAATACTGGACATGTGCCTAATGTGTATGATTCCACTGAGATAAACTATTTCCTCTCGGACGATTTGTGTGCTTAGAGGTAACTATGATGCTAGGTTGTGCCCACCCGTCCTCCCCAAAAAGGAATAAATAATGCTACTCAGGGGTTGCATACCATTACAAAGAGAATCTGCATGTTTTTCATGATTGATAACAATGAAATATCTTTGTTGCCAAGTCTTCTCTTAGTACTCTAACAATGAGGCTGGAAATCTATTATGAATCTCATGTAGGCCTTCCCTTAATTTTGCATGAAGTTTAAAAATCCTTGTAGCATCATTAGGATATATCAATATAGAACATTACTCTGGAATCTGCTTCTCTTCCATTTTGAGCATGAATGTCATTGATGTGATAACTCTTTGATCTTTTCAGTGGTCACACTTATTGGGTGGAATTTTCAGCGAGACAAATCAAAGTGAGTTAGCCGCTTTCGCCTCGTATGCACTTGCATTTCCTGGAAGTTTTTTGGCCCTTGTAGACACTTATGATGTAAGTACAACTTGTGGACATATTCTTTTCCTCTGTATTCTGTGATATTTGGCTTGGCCATCTAAAACTATACACATGGATTTTGTAGAGACAAAACTTAGTCAATAATCTTACTTTGAAAGAGAAAAGGGTACTCGTCATGATATTTATATATCAGGCTAGACATATAATCTTTTTGTATTGGAAGTTCGAAATAATATTCAGCTAGTAATGTTGTTTCGATTAAGTTGTACTTATGCTGCATCCCCCTTTGTTCTTCATTTACAATGTGCTCTTTGATAACGTTTGAACGTACTTTAACAGGTCATGAGAAGTGGTCTTCCAAATTTTTGTGCAGTTGCTCTTGCACTTAATGATTTGGGGTAAGCTGTTTGCATGATGAATTCTATTTAGATTGTAAAATTGCCTTTCTTTTATGCATGTCTTGGCCTCATGTGATCCTTAATATTCCGGAAGGGGAATGGTATGCCAACTAGAATTCCTAATTTTTCAATTTTGTTAATATGATAGTTTTAAACTTGTGTTATTTTGTTTTGTTCATGAACGTGAAAGAATAACTAGTCTAGAATGAAATCCTTGGATTTTGAAACAGCTAAGTGTGAATCTGTCCCCCACATCCACCTTTTAATACAGCAAGAGGTGCAAACACGCAAAGTTGTCCAGGGTCATCAATGGTTCTAGGACCTATTGTCCATGAGATACTTCCATCCTAGTTTGAGAATCATGTGCCATTCCTCTTAGAGTTTTCATGATGATATGTAATTTCATTTATTTTAATTATATATGTGTGGACCTAGCAAGGGAGGGTTAACCTAGTGGAAAGGAAAGGACTCTCCACATCAACCTTGAGGTTGGAGTTCAAGTTACCTATGGAACAAAGTAGGAACCGGTGATTATCGAGGCCTGGGCAAAAGGGGTTCCTGGTGGGGAGGGAGGAAGATAGTTGTCCATAGCTAAAAGAAGGTTTATATATGTGGACCTCGTTGATTAGATGAACCACACATGTACTTAAACATATACTTTCTTCAGACAATCTTGGTGTGTTATTAATGAAAGGTATTTACTTATCAAAAAAACGGAACGCACCTCTTATTTACAATTGATGGTGCAGAACCTTTCTATTTCATAATCACACAAGATATATACATTTTCTTAACGAAGAGCAATATAGATATCTCCCCTCCTTGTCCTAAACAATAAATTCATTTTTGAGCAAATTTGTGGGATTACACTGGGTATGTTGTTGTATTTCTTTAAGCTTGAATTATTACTATGTTTAAACTAGTCTTTTTCTACTTTCTAATGGTAATTTTCTAGTGTATTTTCTCTCTTTTGCACTCGCCCTGTATTTTGTTTTCAGCCTATTTAGTCTTTACATACTATTATGCAGGTATAAAGCAGTGGGCATTAGACTAGACTCTGGTGATCTTGCTTATCAGTCATGTGAAGCTAGGAAATTCTTTTGTGCTATTGAGAAAGAATTTGGATTGCCTGGTTTTGCAAAGACGAGTATCACAGCTAGCAATGATCTTAATGAAGAAACTCTGGATGCACTAAATAAACAAGTAAGATCATTAGGATTCTCTCACATACTGCTCTTATCTTGTGCTCGTCATTCTTATTATCCGTGTTCTACTCTCTGTGAATGATTTCTAGTCTATTGACAACTCTCTGGCTTTTTGTGCTTCACTAAGTTGTTAATCTTGTGGCACTATCTAGATTAAGAGGGTATTCATACATGAAATAATAGTGTACATAAATGTATTCTTCAATGCATATAGTTATGTTTATCAGCTGTGAATGAAGTATGATCAGGAAAATCATCTCTAGCTTGAAATATGAGTTGGTTTAATATAGCTCCCTCAAGATTTTTGTGGACACAGACTGTTCTAGTAGAAATAAACGCATACCCTCCTACTGGTGGACAAAAGCACATCCTTGTTGACTCATAGTTAATGGATAGGTAGAAAGACCAAATCTTTGCCTATGTTGGAATATGAAGTGGAGGTGTGATTATTCTAGCTAAATTGATCTTCTCATTTTAGAACACTCAAATTAGTTAAAACTTGTGGCTTGAATGTTGGTTCTCGTGCCTATTAGCTTTCATTTTTCTCATTCAGTAAAGCTACATCAACTAACTTATACCTTATACAGGGTCACGAGGTTGATGCATTTGGTATTGGTACTCATTTAGTTACCTGTTATGCTCAAGCTGCTCTTGGTGTTGTTTTCAAGTTAGTTGAAATAAACAATCAGCCTAGAATCAAACTCTCTGAAGACGTATCAAAGGTCTGCCAAAGCTATGGATACTCATTTGGTATTTAGATTCAGTGTGGAAGTTCATAATTTCTTGTTTCTAGGTCTCTATTCCATGCAAAAAGCGGTGTTACAGATTGTATGGGAAGGAAGGGTACCCCCTTGTAGACATAATGACTGGTGAAAATGAGCCACATCCCAAGGTGATTTATGAGGCTTGCTTACTGATCTTCTAGTAGTTCTTTGTGCTATTTCATCCATTGTCAATTCTAATTTAGAAATTAGATAAGCTTCATTGGTACCAAAAAACAGATAATGGACAACTTTTTTTTCCTGCAACTTGACAGGTAGGTGAACGAATTTTATGCCGCCACCCATTTAGTGAATCTAAAAGGGCATACGTAGTGCCCCAGCGTGTTGAGGAACTTTTAAAGTGTTTTTGGCCCGGAAAGTCAGGTAAGAGCTGTTATCCCTATATTGTATTAATGTTAGTTTGAATTATTCGTATTTCTACCAGAAGCATGACCCTACTTTTCCATAGACTCCAAATTATTGAGTGAAGCCCCTGTTGCCTGTTGGTAACATTTTTAAGTTACAGTGAGATATTAAAAAATGACTAGTTCAGTTCAGCTGCTCCTTAAGTTAATAAGTGTTGACTAATGGATGGTGGTTTGTCATTCTGAAGCTAAAACAAGAGAAGACCTTCCTCCTCTGAAGGAGATCAGGGAAAGATGTATTGCACAACTGGACCAAATGCGACCAGATCACATGAGAAGGCTGAACCCAACACCATACAAGGTAAGTACCAATTGTTCTCTTTTTTCTCTCAATTAAAAATTTTAAAAGGAAATTGGGGAGGGGGGGGGGGGTAGTAGTCAGGGGAAATGGAGTCAAATCCCCTCACCAACCAAGTGAAAGTTCAGATAGCCAACAAACTAAGCTACTAAGGTGACCTAAATTATACTAGTATGTCTAGGCTGAAGTGCTTTTTCTTTTCAGGTTGTCAGTTTTGATTGAATTTTTGTTGTGCAGGTCAGTGTGAGTGCAAAGTTGTATGATTTCATCCATTTCCTCTGGCTCAATGAAGCACCTGTTGGAGAGTTGCAGTGAACCATGAATGAGAAGTTTGGGAGTCTTCTAGGTTTCTTGTGCATCTTTTTCATCATGTAAACTGAAATTTTACATAAAGTTATTAACCAAAGAGAAGTCCGTTCTTTACTTTTTCCCCCCAGTGATGTTCCGAGGCAATTGTATAAGCTTCCTTGGAAGTTTGTAAAGGTCAATAAAAGTGCATTTGTATTTTCCTCTCAATTGAGTCCTCAGAAATGCGTGGATAAAACTGGGTGAAACCCATGTGCACCTTATAGTTGTGATTAATGTAACTGAGCCAAATTATTGTGACTAGAAAAGGTTTCAGTAATGATTATGGAATTTCATTCTTCTGAAATTGCTCTGCTAGTTGGTTCTCCTTGCCAACTACAC</genome_strand>
        <mrna_strand>CTATATATTCTTAACAACTTCGTTTGTAACGGTCTCAACATATTCTCTCTGTTCTGTAAAACCGAATTGCTGCTAACCCTAGGATTTATGGCTGAAACTATACCTAATGGCGGGCCTGAGAGTGCCAATATTGATGGACCGACCAATCCTATGGTTACGCCTATTTTAACAGATCTCTATCAGTTTACTATGGCCTATGCTTACTGGAAAGCTGGAAAACACAATGAACGAGCTGT................................................................................................................GTTTGACTTGTATTTTCGGAGGAATCCGTTTGGTGGTGAATATACAATATTTGCTGGTTTAGAAGAGTGCATAAAGTTTATTGCTAATTTTAAATTTACTGAGGATGAGATAGCTTTCATCAGGTCATCGTTGCCATCGTCATGTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGCTTCTTTGAATACCTTCGAAGACTTGACTGTTCAGATATTGAGATATATTCTATTTCTGAAGGATCAGTAGTTTTTCCCAAGGTACCGCTGATGAGGATTGAAGGACCAGTTGCT........................................................................................................................GTGGTTCAACTACTGGAAACACCATTTGTAAACCTCATAAATTATGCATCACTAGTTACTACTAATGCTGCAAGACACCGTTTCGTTGCTGGAAGGTCCAAAATATTGCTTGAATTTGGGCTTAGGAGAGCACAG................................................................................GGTCCTGATGGTGGTATATCAGCATCCAAGTATTGCTACATGGGTGGATTTGATGCGACAAG...........................................................................................................................................................................................................................................................................................................................................................CAATGTGGCAGCTGGAAAGCTGTTTGGAATCCCACTCCGTGGGACACATTCCCATGCCTTTGTTAGCTCATTTCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCCAGATGAGATCATAGAGAAATCACTTCAACATCATAATGGTTCTAGTGTTTGTGAGGATTTTGTTAGTCTGGTACAGACATGGCTTGATAAATTAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTCACACTTATTGGGTGGAATTTTCAGCGAGACAAATCAAAGTGAGTTAGCCGCTTTCGCCTCGTATGCACTTGCATTTCCTGGAAGTTTTTTGGCCCTTGTAGACACTTATGAT...............................................................................................................................................................................................................................................................................................................GTCATGAGAAGTGGTCTTCCAAATTTTTGTGCAGTTGCTCTTGCACTTAATGATTTGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATAAAGCAGTGGGCATTAGACTAGACTCTGGTGATCTTGCTTATCAGTCATGTGAAGCTAGGAAATTCTTTTGTGCTATTGAGAAAGAATTTGGATTGCCTGGTTTTGCAAAGACGAGTATCACAGCTAGCAATGATCTTAATGAAGAAACTCTGGATGCACTAAATAAACAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCACGAGGTTGATGCATTTGGTATTGGTACTCATTTAGTTACCTGTTATGCTCAAGCTGCTCTTGGTGTTGTTTTCAAGTTAGTTGAAATAAACAATCAGCCTAGAATCAAACTCTCTGAAGACGTATCAAAG.......................................................................GTCTCTATTCCATGCAAAAAGCGGTGTTACAGATTGTATGGGAAGGAAGGGTACCCCCTTGTAGACATAATGACTGGTGAAAATGAGCCACATCCCAAG................................................................................................................................................GTAGGTGAACGAATTTTATGCCGCCACCCATTTAGTGAATCTAAAAGGGCATACGTAGTGCCCCAGCGTGTTGAGGAACTTTTAAAGTGTTTTTGGCCCGGAAAGTCAG.....................................................................................................................................................................................................................................CTAAAACAAGAGAAGACCTTCCTCCTCTGAAGGAGATCAGGGAAAGATGTATTGCACAACTGGACCAAATGCGACCAGATCACATGAGAAGGCTGAACCCAACACCATACAAG..........................................................................................................................................................................................................................................GTCAGTGTGAGTGCAAAGTTGTATGATTTCATCCATTTCCTCTGGCTCAATGAAGCACCTGTTGGAGAGTTGCAGTGAACCATGAATGAGAAGTTTGGGAGTCTTCTAGGTTTCTTGTGCATCTTTTTCATCATGTAAACTGAAATTTTACATAAAGTTATTAACCAAAGAGAAGTCCGTTCTTTACTTTTTCCCCCCAGTGATGTTCCGAGGCAATTGTATAAGCTTCCTTGGAAGTTTGTAAAGGTCAATAAAAGTGCATTTGTATTTTCCTCTCAATTGAGTCCTCAGAAATGCGTGGATAAAACTGGGTGAAACCCATGTGCACCTTATAGTTGTGATTAATGTAACTGAGCCAAATTATTGTGACTAGAAAAGGTTTCAGTAATGATTATGGAATTTCATTCTTCTGAAATTGCTCTGCTAGTTGGTTCTCCTTGCCAACTACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600981" ref_strand="-" ref_description="SGN-U600981 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>catcaaaaagtaggtttgtgcgaggggaatgcattcacaaatgccaaagtggctgggaatctacaagttaaccaagacgcctcgttaaatgctattttcaacccaactgaaaattgtacagaaactaaggtaacaccaccgataactatgtcaaatataaaccggtcagacagtgcgtttgagcttgagtcatcgatgaatattcaccttgatccctttcagctctcaagatctaccagcaaggaaatttggagggaggatgacttacctttatatggtatgaatgagctaacgaccaaaactgcatcaactggatcaaatctggcattctcagttcccctagatacggatgcatctaacctgaagagaagcactcgggaggcctgcttgcttcgatatcagtttggtgctgtgaatgaaaccaatctggattgtgaccaacttctttcccaacaactgtatagcaacttctgaattttggcctgcatcgccttgctggattttgttgaagtaatgagacatgcattttgctgcttaggacgtttaatgttgttaacttttgggctcactagccactgtaatgaatgaatggaatataaatgaaaagattggactagtttctatcttgttatgaaatacgaaaattactact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="-" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="128699" stop="127130"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="128399" g_stop="128157" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="243" r_length="243" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="128156" i_stop="128046" i_length="111">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="128045" g_stop="127976" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="244" r_stop="313" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="127975" i_stop="127886" i_length="90">
            <donor d_prob="0.837" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="127885" g_stop="127735" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="464" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127734" i_stop="127618" i_length="117">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.534" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="127617" g_stop="127430" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="652" r_length="188" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="-" ref_id="SGN-U600981" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>652</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U600981" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="128399" e_stop="128157"/>
          <exon e_start="128045" e_stop="127976"/>
          <exon e_start="127885" e_stop="127735"/>
          <exon e_start="127617" e_stop="127430"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCAAAAAGTAGGTTTGTGCGAGGGGAATGCATTCACAAATGCCAAAGTGGCTGGGAATCTACAAGTTAACCAAGACGCCTCGTTAAATGCTATTTTCAACCCAACTGAAAATTGTACAGAAACTAAGGTAACACCACCGATAACTATGTCAAATATAAACCGGTCAGACAGTGCGTTTGAGCTTGAGTCATCGATGAATATTCACCTTGATCCCTTTCAGCTCTCAAGATCTACCAGCAAGGTATGTTGGATACAAAACCTATTGGAATGCCATTTTTTATGAGGATGCAGAATTGCAGATTAAGGAATCAATTTATTTAACCATTTGACATTCACATTCTGTTTTGCGAAGGAAATTTGGAGGGAGGATGACTTACCTTTATATGGTATGAATGAGCTAACGACCAAAACTGCATCAACTGGTAGATTATTTGCTTGATATCCTTGCCTAGTTGACAACTTTTGCCTTGTATCCAGGTCTCTTTACCATTTTATATTTCATTGTATTATAGGATCAAATCTGGCATTCTCAGTTCCCCTAGATACGGATGCATCTAACCTGAAGAGAAGCACTCGGGAGGCCTGCTTGCTTCGATATCAGTTTGGTGCTGTGAATGAAACCAATCTGGATTGTGACCAACTTCTTTCCCAACAACTGTATAGGTAAGTGAACTCACATTATACCCGTGCTCTTACATAGCAATGATTTTTTTTAGTCCTTGTTCTATTGTTAGTCACTTTGGAAGTACTTATGTTGACATTATCTTAAGGTGAATGCAGCAACTTCTGAATTTTGGCCTGCATCGCCTTGCTGGATTTTGTTGAAGTAATGAGACATGCATTTTGCTGCTTAGGACGTTTAATGTTGTTAACTTTTGGGCTCACTAGCCACTGTAATGAATGAATGGAATATAAATGAAAAGATTGGACTAGTTTCTATCTTGTTATGAAATACGAAAATTACTACT</genome_strand>
        <mrna_strand>CATCAAAAAGTAGGTTTGTGCGAGGGGAATGCATTCACAAATGCCAAAGTGGCTGGGAATCTACAAGTTAACCAAGACGCCTCGTTAAATGCTATTTTCAACCCAACTGAAAATTGTACAGAAACTAAGGTAACACCACCGATAACTATGTCAAATATAAACCGGTCAGACAGTGCGTTTGAGCTTGAGTCATCGATGAATATTCACCTTGATCCCTTTCAGCTCTCAAGATCTACCAGCAAG...............................................................................................................GAAATTTGGAGGGAGGATGACTTACCTTTATATGGTATGAATGAGCTAACGACCAAAACTGCATCAACTG..........................................................................................GATCAAATCTGGCATTCTCAGTTCCCCTAGATACGGATGCATCTAACCTGAAGAGAAGCACTCGGGAGGCCTGCTTGCTTCGATATCAGTTTGGTGCTGTGAATGAAACCAATCTGGATTGTGACCAACTTCTTTCCCAACAACTGTATAG.....................................................................................................................CAACTTCTGAATTTTGGCCTGCATCGCCTTGCTGGATTTTGTTGAAGTAATGAGACATGCATTTTGCTGCTTAGGACGTTTAATGTTGTTAACTTTTGGGCTCACTAGCCACTGTAATGAATGAATGGAATATAAATGAAAAGATTGGACTAGTTTCTATCTTGTTATGAAATACGAAAATTACTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567860" ref_strand="+" ref_description="SGN-U567860 Tomato 200607#2 [12 ESTs aligned] (*GB) gi|54306640|gb|AAV33474.1| (e_value=3e-41) basic helix-loop-helix protein [Fragaria x ananassa]; (*ATH) AT4G36930.1 (e_value=4e-41) | Symbol: None | basic helix-loop-helix (bHLH) protein SPATULA (SPT), identical to SPATULA (SPT) GI:11245493 from (Arabidopsis thaliana) | chr4:17414124-17416291 FORWARD | Aliases: AP22.25, AP22_25; (*SWP) sp|Q9FUA4|SPT_ARATH (e_value=3e-40) Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT; ">
      <seq>tcctagatataaaacagtgtgcacatagacaaaattaacttgatctgctcaacagctggactataatggccaacaacaatgtttattatcacaatgctaatttttctttgactgatcctgatcctgaaccagatgatatttctgtgtttcttcgtcatattctacttccttcttcgtcttcgtcttcatcttcatctaattttatggccctgaagagtaatgaaatgcaatattcctcatcattacctcatcttatgcctaataataatcaacagggtaatttgtcatccatgatgaattcatcagcttgcggcattttctcgtcttcctatggggtttgtaatggtgcaactactgtttcttcctcatctgttgggaccatagattacgatccggatgagtatgaatgtgaaagtgaggatggtacagaggatttgggggcggaagcttcagttcaaccgccatctcgtaacacttccaagagaagcagagcagctgaagtgcacaatttgtctgaaaagaggagaagaagcaggattaatgagaagatgaaagcattgcaaaaacttattccaaattcaaataagactgacaaggcttcaatgcttgatgaagccattgagtatcttaagcagcttcagctccaagtacagatgttgacaatgagaaacgggttaaacatgtatcctcttggcctgccccgaatgctacaaccaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0064B17-kMlY4/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0064B17.3" temp_strand="-" temp_description="C02HBa0064B17.3  AC215373.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0064B17 sequenced_by:kribb upload_account_name:korea">
        <position start="130059" stop="128111"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129759" g_stop="129327" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="419" r_length="419" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129326" i_stop="129193" i_length="134">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129192" g_stop="129091" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="521" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129090" i_stop="129008" i_length="83">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="129007" g_stop="128942" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="522" r_stop="587" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="128941" i_stop="128818" i_length="124">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128817" g_stop="128752" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="588" r_stop="653" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128751" i_stop="128475" i_length="277">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="128474" g_stop="128410" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="654" r_stop="718" r_length="65" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0064B17.3" gen_strand="-" ref_id="SGN-U567860" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>732</cumulative_length_of_scored_exons>
        <coverage percentage="1.019" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0064B17.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U567860" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129759" e_stop="129327"/>
          <exon e_start="129192" e_stop="129091"/>
          <exon e_start="129007" e_stop="128942"/>
          <exon e_start="128817" e_stop="128752"/>
          <exon e_start="128474" e_stop="128410"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTACATGTAAAACAGTGTGAACGTAGACAAAATTAACTTGATCTGCTCAACACTGAACTTGATTTTGCTGGACTATAATGGCCAACAACAATGTTTATTATCACAATGCTAATTTTTCTTTGACTGATCCTGATCCTGAACCAGATGATATTTCTGTGTTTCTTCGTCATATTCTACTTCCTTCTTCGTCTTCGTCTTCATCTTCATCTAATTTTATGGCCCTGAAGAGTAATGAAATGCAATATTCCTCATCATTACCTCATCTTATGCCTAATAATAATCAACAGGGTAATTTGTCATCCATGATGAATTCATCAGCTTGCGGCATTTTCTCGTCTTCCTATGGGGTTTGTAATGGTGCAACTACTGTTTCTTCCTCATCTGTTGGGACCATAGATTACGATCCGGATGAGTATGAATGTGAAAGTGAGGTATTTCTACATTTTCTACTTAATTCGTTTTGATTAATTAGTGTATTTAAGTTTTTATTTCCGAATTTGACTTTTTTACTTAATCCTGGTATATATATATATATATATTTTGTGATGATTTTTTTAATATGTAGGATGGTACAGAGGATTTGGGGGCGGAAGCTTCAGTTCAACCGCCATCTCGTAACACTTCCAAGAGAAGCAGAGCAGCTGAAGTGCACAATTTGTCTGAAAAGGTTTGTTTATTTTTTTGTTAATTAAGTTCATTATTGTCTGAATCGATGATTCCACGGGTTTAAATCTTGAATATGATTTACAGAGGAGAAGAAGCAGGATTAATGAGAAGATGAAAGCATTGCAAAAACTTATTCCAAATTCAAATAAGGTGAGGAGTTGCATGTCTAGCAATTTTGAATCGAGTCTTGAAATAAGTAAATAACATAAACTTTTAGCAATATAAAGCTTAAAAGATTTTTGATTTTATTATTTTCTGATGGATTTCTGGACAGACTGACAAGGCTTCAATGCTTGATGAAGCCATTGAGTATCTTAAGCAGCTTCAGCTCCAAGTACAGGTTTGCTGCTTCTGTTTAAATTTGCTGCATGTAATTTGTTTGGTATGATGGGGAGATAAAGATATTTTTTTAGAGGATAATATAATGTAATATTGTGTTGATTGGCCCAACTTTAGTGAAATTTAAAGTTCAGATAGTTGCAAAGAACATGTAGTGTTATTTGACTCAATTCAGTATATTTCCTAGATTGGTTCTAGCTGGTTATCTGTTCATTTAACACTAGTTGATTCGATCAAGTTATATGATTTATAGCATAAGAATGTACTTTGATCTGTAGATGTTGACAATGAGAAACGGGTTAAACATGTATCCTCTTGGCCTGCCACGAATGCTACAACAAAA</genome_strand>
        <mrna_strand>TCCTAGATATAAAACAGTGTGCACATAGACAAAATTAACTTGATCTGCT-----C--AAC---A----GCTGGACTATAATGGCCAACAACAATGTTTATTATCACAATGCTAATTTTTCTTTGACTGATCCTGATCCTGAACCAGATGATATTTCTGTGTTTCTTCGTCATATTCTACTTCCTTCTTCGTCTTCGTCTTCATCTTCATCTAATTTTATGGCCCTGAAGAGTAATGAAATGCAATATTCCTCATCATTACCTCATCTTATGCCTAATAATAATCAACAGGGTAATTTGTCATCCATGATGAATTCATCAGCTTGCGGCATTTTCTCGTCTTCCTATGGGGTTTGTAATGGTGCAACTACTGTTTCTTCCTCATCTGTTGGGACCATAGATTACGATCCGGATGAGTATGAATGTGAAAGTGAG......................................................................................................................................GATGGTACAGAGGATTTGGGGGCGGAAGCTTCAGTTCAACCGCCATCTCGTAACACTTCCAAGAGAAGCAGAGCAGCTGAAGTGCACAATTTGTCTGAAAAG...................................................................................AGGAGAAGAAGCAGGATTAATGAGAAGATGAAAGCATTGCAAAAACTTATTCCAAATTCAAATAAG............................................................................................................................ACTGACAAGGCTTCAATGCTTGATGAAGCCATTGAGTATCTTAAGCAGCTTCAGCTCCAAGTACAG.....................................................................................................................................................................................................................................................................................ATGTTGACAATGAGAAACGGGTTAAACATGTATCCTCTTGGCCTGCCCCGAATGCTACAACCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>28</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="3750" PGL_stop="355"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3750" e_stop="3460"/>
            <exon e_start="3248" e_stop="3044"/>
            <exon e_start="2559" e_stop="2371"/>
            <exon e_start="2276" e_stop="2248"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.000" e_score="0.993"/>
          <exon-intron don_prob="0.976" acc_prob="0.871" e_score="0.990"/>
          <exon-intron don_prob="0.668" acc_prob="1.000" e_score="0.989"/>
          <exon-only e_score="0.931"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="3750" e_stop="3460" e_length="291"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.000">
            <gDNA_intron_boundary i_start="3459" i_stop="3249" i_length="211"/>
          </intron>
          <exon e_serial="2" e_score="0.990">
            <gDNA_exon_boundary e_start="3248" e_stop="3044" e_length="205"/>
          </exon>
          <intron i_serial="2" don_prob="0.976" acc_prob="0.871">
            <gDNA_intron_boundary i_start="3043" i_stop="2560" i_length="484"/>
          </intron>
          <exon e_serial="3" e_score="0.989">
            <gDNA_exon_boundary e_start="2559" e_stop="2371" e_length="189"/>
          </exon>
          <intron i_serial="3" don_prob="0.668" acc_prob="1.000">
            <gDNA_intron_boundary i_start="2370" i_stop="2277" i_length="94"/>
          </intron>
          <exon e_serial="4" e_score="0.931">
            <gDNA_exon_boundary e_start="2276" e_stop="2248" e_length="29"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3750" stop="3460"/>
              <exon start="3248" stop="3044"/>
              <exon start="2559" stop="2371"/>
              <exon start="2276" stop="2248"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582212" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGACCGCTGTAGATTCCAATATCTGCCGTAACAGTAGCTAACGATTAGATCTATAGATTCCAATTTCTGCAGTAACACCTACAATAAGCAACAATGGCGGCAGTGATCGAGCACAAGTCTTACGCTAGAGTTGGACTGCTTGGAAACCCTAGCGATGTTTATTTTGGGAACACTATATCCTTCAGCCTCGGGAATTTTTGGGCTTCTGTTCGTTTGGAACCTTCTATAGATCTCGTCATTGTTCCTCATCCTTCTCACGATCTCGTCCAATTCAATTCAATTTCTCACCTG : TTCTATGTGGATTCTCTTGCAGGTTGATTGAATTTGACTTAACACTTGGCTGTAGGTGAACAGGTTGCAGAATGAGGGGTACTATGGAGGGGTTCGTTTACTTATGGCAATCGTTAAAATATTTCACAACTATTGCAAAGAGAGCAACATCACCTTACATGATGGGAATTTCACTCTCTCGTATGACACTAACATTCCCCGCCAG : ACAGGGCTTTCAGGTTCTAGTGCAATCGTAAGTGCTGCACTGAGTTGCCTTCTTGATTTTTACAAAGTCAGACATCTCATCAAAGTTGAGGTAAGGCCGAACCTTGTCCTTAATGCAGAGAAGGAACTTGGAATTGTTGCAGGTCTTCAAGATAGAGTGGCCCAGGTGTATGGAGGCGTTGTATATATG : GACTTTGACAAGAATCACATGGATGAATT</gDNA_template>
            <first_frame> R  P  L  *  I  P  I  S  A  V  T  V  A  N  D  *  I  Y  R  F  Q  F  L  Q  *  H  L  Q  *  A  T  M  A  A  V  I  E  H  K  S  Y  A  R  V  G  L  L  G  N  P  S  D  V  Y  F  G  N  T  I  S  F  S  L  G  N  F  W  A  S  V  R  L  E  P  S  I  D  L  V  I  V  P  H  P  S  H  D  L  V  Q  F  N  S  I  S  H  L  :  F  Y  V  D  S  L  A  G  *  L  N  L  T  *  H  L  A  V  G  E  Q  V  A  E  *  G  V  L  W  R  G  S  F  T  Y  G  N  R  *  N  I  S  Q  L  L  Q  R  E  Q  H  H  L  T  *  W  E  F  H  S  L  V  *  H  *  H  S  P  P   : D  R  A  F  R  F  *  C  N  R  K  C  C  T  E  L  P  S  *  F  L  Q  S  Q  T  S  H  Q  S  *  G  K  A  E  P  C  P  *  C  R  E  G  T  W  N  C  C  R  S  S  R  *  S  G  P  G  V  W  R  R  C  I  Y   : G  L  *  Q  E  S  H  G  *  I </first_frame>
            <second_frame>  D  R  C  R  F  Q  Y  L  P  *  Q  *  L  T  I  R  S  I  D  S  N  F  C  S  N  T  Y  N  K  Q  Q  W  R  Q  *  S  S  T  S  L  T  L  E  L  D  C  L  E  T  L  A  M  F  I  L  G  T  L  Y  P  S  A  S  G  I  F  G  L  L  F  V  W  N  L  L  *  I  S  S  L  F  L  I  L  L  T  I  S  S  N  S  I  Q  F  L  T  C :   S  M  W  I  L  L  Q  V  D  *  I  *  L  N  T  W  L  *  V  N  R  L  Q  N  E  G  Y  Y  G  G  V  R  L  L  M  A  I  V  K  I  F  H  N  Y  C  K  E  S  N  I  T  L  H  D  G  N  F  T  L  S  Y  D  T  N  I  P  R  Q  :  T  G  L  S  G  S  S  A  I  V  S  A  A  L  S  C  L  L  D  F  Y  K  V  R  H  L  I  K  V  E  V  R  P  N  L  V  L  N  A  E  K  E  L  G  I  V  A  G  L  Q  D  R  V  A  Q  V  Y  G  G  V  V  Y  M  :  D  F  D  K  N  H  M  D  E   </second_frame>
            <third_frame>   T  A  V  D  S  N  I  C  R  N  S  S  *  R  L  D  L  *  I  P  I  S  A  V  T  P  T  I  S  N  N  G  G  S  D  R  A  Q  V  L  R  *  S  W  T  A  W  K  P  *  R  C  L  F  W  E  H  Y  I  L  Q  P  R  E  F  L  G  F  C  S  F  G  T  F  Y  R  S  R  H  C  S  S  S  F  S  R  S  R  P  I  Q  F  N  F  S  P   : V  L  C  G  F  S  C  R  L  I  E  F  D  L  T  L  G  C  R  *  T  G  C  R  M  R  G  T  M  E  G  F  V  Y  L  W  Q  S  L  K  Y  F  T  T  I  A  K  R  A  T  S  P  Y  M  M  G  I  S  L  S  R  M  T  L  T  F  P  A  R :   Q  G  F  Q  V  L  V  Q  S  *  V  L  H  *  V  A  F  L  I  F  T  K  S  D  I  S  S  K  L  R  *  G  R  T  L  S  L  M  Q  R  R  N  L  E  L  L  Q  V  F  K  I  E  W  P  R  C  M  E  A  L  Y  I  W :   T  L  T  R  I  T  W  M  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3193" stop="3044"/>
                    <exon start="2559" stop="2371"/>
                    <exon start="2276" stop="2250"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>366</number_coding_nucleotides>
                  <number_encoded_amino_acids>122</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VNRLQNEGYYGGVRLLMAIVKIFHNYCKESNITLHDGNFTLSYDTNIPRQTGLSGSSAIVSAALSCLLDFYKVRHLIKVEVRPNLVLNAEKELGIVAGLQDRVAQVYGGVVYMDFDKNHMDE</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3663" stop="3460"/>
                    <exon start="3248" stop="3222"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ATMAAVIEHKSYARVGLLGNPSDVYFGNTISFSLGNFWASVRLEPSIDLVIVPHPSHDLVQFNSISHLFYVDSLAG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="3719" e_stop="3460"/>
            <exon e_start="3193" e_stop="3044"/>
            <exon e_start="2559" e_stop="2371"/>
            <exon e_start="2276" e_stop="2160"/>
            <exon e_start="1775" e_stop="1615"/>
            <exon e_start="878" e_stop="355"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.871" e_score="1.000"/>
          <exon-intron don_prob="0.668" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.752" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="3719" e_stop="3460" e_length="260"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.987">
            <gDNA_intron_boundary i_start="3459" i_stop="3194" i_length="266"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="3193" e_stop="3044" e_length="150"/>
          </exon>
          <intron i_serial="2" don_prob="0.976" acc_prob="0.871">
            <gDNA_intron_boundary i_start="3043" i_stop="2560" i_length="484"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="2559" e_stop="2371" e_length="189"/>
          </exon>
          <intron i_serial="3" don_prob="0.668" acc_prob="1.000">
            <gDNA_intron_boundary i_start="2370" i_stop="2277" i_length="94"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="2276" e_stop="2160" e_length="117"/>
          </exon>
          <intron i_serial="4" don_prob="0.752" acc_prob="0.999">
            <gDNA_intron_boundary i_start="2159" i_stop="1776" i_length="384"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="1775" e_stop="1615" e_length="161"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="1614" i_stop="879" i_length="736"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="878" e_stop="355" e_length="524"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3719" stop="3460"/>
              <exon start="3193" stop="3044"/>
              <exon start="2559" stop="2371"/>
              <exon start="2276" stop="2160"/>
              <exon start="1775" stop="1615"/>
              <exon start="878" stop="355"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582213" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGTAGCTAACGATTAGATCTATAGATTCCAATTTCTGCAGTAACACCTACAATAAGCAACAATGGCGGCAGTGATCGAGCACAAGTCTTACGCTAGAGTTGGACTGCTTGGAAACCCTAGCGATGTTTATTTTGGGAACACTATATCCTTCAGCCTCGGGAATTTTTGGGCTTCTGTTCGTTTGGAACCTTCTATAGATCTCGTCATTGTTCCTCATCCTTCTCACGATCTCGTCCAATTCAATTCAATTTCTCACCTG : GTGAACAGGTTGCAGAATGAGGGGTACTATGGAGGGGTTCGTTTACTTATGGCAATCGTTAAAATATTTCACAACTATTGCAAAGAGAGCAACATCACCTTACATGATGGGAATTTCACTCTCTCGTATGACACTAACATTCCCCGCCAG : ACAGGGCTTTCAGGTTCTAGTGCAATCGTAAGTGCTGCACTGAGTTGCCTTCTTGATTTTTACAAAGTCAGACATCTCATCAAAGTTGAGGTAAGGCCGAACCTTGTCCTTAATGCAGAGAAGGAACTTGGAATTGTTGCAGGTCTTCAAGATAGAGTGGCCCAGGTGTATGGAGGCGTTGTATATATG : GACTTTGACAAGAATCACATGGATGAATTAGGTCATGGCATATATACACCCATGGATGTTGATCTTCTCCCACCTCTTTATCTGATCTATGCAGAAAATCCCAGTGATTCTGGAAAG : GTACATAGTACAGTTCGACAAAGATGGTTAGATGGTGATAAATTTATAAGATCAACCATTGAAGAGGTTGCAAATATAGCTGTGGAGGGACGGAAAGCTCTTCTTGAGAAGGACTACAATAAGTTAGCAGCCCTCATGAATCACAATTTTGACTTGAGAAG : GCGTATGTTTGGAGATAATGCCCTTGGAGCTATGAATATAGAGATGGTTGAAATCGCTCGAAAGGTAGGTGCTGCTTCCAAGTTCACAGGAAGTGGTGGGGCTGTGGTTGTGTACTGTCCGGATGGAACTTCACAAGTGAAGCAGCTGGAGGACGCATGCCACAAAGCTGGTTTCACTTTTCAACCAATTAAAGTTATGCCTTCGTTTCTAAACGAAACTGATCTTCAAACTCTGAAATCAAAGTGAAAATGATGATCTGCTTTCAAATATGTCGAGAGTCCTCTTTATTCTTTATTTCTTTCACCTTTCATTGGCATATGCTAAGCGCTTTTCACCAAGTATGTAGCGACCATTGAAAGAAATGCTAGTATAGATAGTTTTAGTTACAATTGTTTTGCTGCTATTGTAATGCATTTCGAGAAGCGCTTACTTTACAGTTTTAGCGTAAACCGTCATTAGATTCACATATTTTAACTCCAATTGTGTGATGCCAATTATAATTACTACTAAATCTGTTACTTCT</gDNA_template>
            <first_frame> Q  *  L  T  I  R  S  I  D  S  N  F  C  S  N  T  Y  N  K  Q  Q  W  R  Q  *  S  S  T  S  L  T  L  E  L  D  C  L  E  T  L  A  M  F  I  L  G  T  L  Y  P  S  A  S  G  I  F  G  L  L  F  V  W  N  L  L  *  I  S  S  L  F  L  I  L  L  T  I  S  S  N  S  I  Q  F  L  T  W :   *  T  G  C  R  M  R  G  T  M  E  G  F  V  Y  L  W  Q  S  L  K  Y  F  T  T  I  A  K  R  A  T  S  P  Y  M  M  G  I  S  L  S  R  M  T  L  T  F  P  A  R :   Q  G  F  Q  V  L  V  Q  S  *  V  L  H  *  V  A  F  L  I  F  T  K  S  D  I  S  S  K  L  R  *  G  R  T  L  S  L  M  Q  R  R  N  L  E  L  L  Q  V  F  K  I  E  W  P  R  C  M  E  A  L  Y  I  W :   T  L  T  R  I  T  W  M  N  *  V  M  A  Y  I  H  P  W  M  L  I  F  S  H  L  F  I  *  S  M  Q  K  I  P  V  I  L  E  R :   Y  I  V  Q  F  D  K  D  G  *  M  V  I  N  L  *  D  Q  P  L  K  R  L  Q  I  *  L  W  R  D  G  K  L  F  L  R  R  T  T  I  S  *  Q  P  S  *  I  T  I  L  T  *  E   : G  V  C  L  E  I  M  P  L  E  L  *  I  *  R  W  L  K  S  L  E  R  *  V  L  L  P  S  S  Q  E  V  V  G  L  W  L  C  T  V  R  M  E  L  H  K  *  S  S  W  R  T  H  A  T  K  L  V  S  L  F  N  Q  L  K  L  C  L  R  F  *  T  K  L  I  F  K  L  *  N  Q  S  E  N  D  D  L  L  S  N  M  S  R  V  L  F  I  L  Y  F  F  H  L  S  L  A  Y  A  K  R  F  S  P  S  M  *  R  P  L  K  E  M  L  V  *  I  V  L  V  T  I  V  L  L  L  L  *  C  I  S  R  S  A  Y  F  T  V  L  A  *  T  V  I  R  F  T  Y  F  N  S  N  C  V  M  P  I  I  I  T  T  K  S  V  T  S </first_frame>
            <second_frame>  S  S  *  R  L  D  L  *  I  P  I  S  A  V  T  P  T  I  S  N  N  G  G  S  D  R  A  Q  V  L  R  *  S  W  T  A  W  K  P  *  R  C  L  F  W  E  H  Y  I  L  Q  P  R  E  F  L  G  F  C  S  F  G  T  F  Y  R  S  R  H  C  S  S  S  F  S  R  S  R  P  I  Q  F  N  F  S  P   : G  E  Q  V  A  E  *  G  V  L  W  R  G  S  F  T  Y  G  N  R  *  N  I  S  Q  L  L  Q  R  E  Q  H  H  L  T  *  W  E  F  H  S  L  V  *  H  *  H  S  P  P   : D  R  A  F  R  F  *  C  N  R  K  C  C  T  E  L  P  S  *  F  L  Q  S  Q  T  S  H  Q  S  *  G  K  A  E  P  C  P  *  C  R  E  G  T  W  N  C  C  R  S  S  R  *  S  G  P  G  V  W  R  R  C  I  Y   : G  L  *  Q  E  S  H  G  *  I  R  S  W  H  I  Y  T  H  G  C  *  S  S  P  T  S  L  S  D  L  C  R  K  S  Q  *  F  W  K   : G  T  *  Y  S  S  T  K  M  V  R  W  *  *  I  Y  K  I  N  H  *  R  G  C  K  Y  S  C  G  G  T  E  S  S  S  *  E  G  L  Q  *  V  S  S  P  H  E  S  Q  F  *  L  E  K  :  A  Y  V  W  R  *  C  P  W  S  Y  E  Y  R  D  G  *  N  R  S  K  G  R  C  C  F  Q  V  H  R  K  W  W  G  C  G  C  V  L  S  G  W  N  F  T  S  E  A  A  G  G  R  M  P  Q  S  W  F  H  F  S  T  N  *  S  Y  A  F  V  S  K  R  N  *  S  S  N  S  E  I  K  V  K  M  M  I  C  F  Q  I  C  R  E  S  S  L  F  F  I  S  F  T  F  H  W  H  M  L  S  A  F  H  Q  V  C  S  D  H  *  K  K  C  *  Y  R  *  F  *  L  Q  L  F  C  C  Y  C  N  A  F  R  E  A  L  T  L  Q  F  *  R  K  P  S  L  D  S  H  I  L  T  P  I  V  *  C  Q  L  *  L  L  L  N  L  L  L   </second_frame>
            <third_frame>   V  A  N  D  *  I  Y  R  F  Q  F  L  Q  *  H  L  Q  *  A  T  M  A  A  V  I  E  H  K  S  Y  A  R  V  G  L  L  G  N  P  S  D  V  Y  F  G  N  T  I  S  F  S  L  G  N  F  W  A  S  V  R  L  E  P  S  I  D  L  V  I  V  P  H  P  S  H  D  L  V  Q  F  N  S  I  S  H  L  :  V  N  R  L  Q  N  E  G  Y  Y  G  G  V  R  L  L  M  A  I  V  K  I  F  H  N  Y  C  K  E  S  N  I  T  L  H  D  G  N  F  T  L  S  Y  D  T  N  I  P  R  Q  :  T  G  L  S  G  S  S  A  I  V  S  A  A  L  S  C  L  L  D  F  Y  K  V  R  H  L  I  K  V  E  V  R  P  N  L  V  L  N  A  E  K  E  L  G  I  V  A  G  L  Q  D  R  V  A  Q  V  Y  G  G  V  V  Y  M  :  D  F  D  K  N  H  M  D  E  L  G  H  G  I  Y  T  P  M  D  V  D  L  L  P  P  L  Y  L  I  Y  A  E  N  P  S  D  S  G  K  :  V  H  S  T  V  R  Q  R  W  L  D  G  D  K  F  I  R  S  T  I  E  E  V  A  N  I  A  V  E  G  R  K  A  L  L  E  K  D  Y  N  K  L  A  A  L  M  N  H  N  F  D  L  R  R :   R  M  F  G  D  N  A  L  G  A  M  N  I  E  M  V  E  I  A  R  K  V  G  A  A  S  K  F  T  G  S  G  G  A  V  V  V  Y  C  P  D  G  T  S  Q  V  K  Q  L  E  D  A  C  H  K  A  G  F  T  F  Q  P  I  K  V  M  P  S  F  L  N  E  T  D  L  Q  T  L  K  S  K  *  K  *  *  S  A  F  K  Y  V  E  S  P  L  Y  S  L  F  L  S  P  F  I  G  I  C  *  A  L  F  T  K  Y  V  A  T  I  E  R  N  A  S  I  D  S  F  S  Y  N  C  F  A  A  I  V  M  H  F  E  K  R  L  L  Y  S  F  S  V  N  R  H  *  I  H  I  F  *  L  Q  L  C  D  A  N  Y  N  Y  Y  *  I  C  Y  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="-"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3663" stop="3460"/>
                    <exon start="3193" stop="3044"/>
                    <exon start="2559" stop="2371"/>
                    <exon start="2276" stop="2160"/>
                    <exon start="1775" stop="1615"/>
                    <exon start="878" stop="632"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1065</number_coding_nucleotides>
                  <number_encoded_amino_acids>355</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ATMAAVIEHKSYARVGLLGNPSDVYFGNTISFSLGNFWASVRLEPSIDLVIVPHPSHDLVQFNSISHLVNRLQNEGYYGGVRLLMAIVKIFHNYCKESNITLHDGNFTLSYDTNIPRQTGLSGSSAIVSAALSCLLDFYKVRHLIKVEVRPNLVLNAEKELGIVAGLQDRVAQVYGGVVYMDFDKNHMDELGHGIYTPMDVDLLPPLYLIYAENPSDSGKVHSTVRQRWLDGDKFIRSTIEEVANIAVEGRKALLEKDYNKLAALMNHNFDLRRRMFGDNALGAMNIEMVEIARKVGAASKFTGSGGAVVVYCPDGTSQVKQLEDACHKAGFTFQPIKVMPSFLNETDLQTLKSK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="17188" PGL_stop="19313"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17188" e_stop="17671"/>
            <exon e_start="18159" e_stop="19313"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.966" e_score="1.000"/>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="17188" e_stop="17671" e_length="484"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.966">
            <gDNA_intron_boundary i_start="17672" i_stop="18158" i_length="487"/>
          </intron>
          <exon e_serial="2" e_score="0.999">
            <gDNA_exon_boundary e_start="18159" e_stop="19313" e_length="1155"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17188" stop="17671"/>
              <exon start="18159" stop="19313"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584150" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGTGAAGGAGAAGATACAGCGTGGGTGGGGGGTGGGGGGTGGGGTTGCATCGTGTGTGTCTCTATATATAGTTTATCTGTAGAAAGAGTGTTGAATTAGAAGAAAAAGAAGAAGAACACAACAAACGGCTACAATTTAGCGTGTTTTTATATAGTCAAATTCAATCCACTAAGAAAAAAAAATTGTAAAATAACTTCCCCTCTCATTGATAATGGCAATTCCATTGCTGTAAATTTGAGAGGGAAGGGGGTTTCTTTTTTCTTCAGACAATCTCTCTTTTCATAATTCGTTTATTTTCTGAATTTTACAGAAGGTAACAAAAAATCTTGAAAAAGAGAGGAAAAAAATTGGAAGAAGCCAAAGTTTCATTGGCCATTTTTAGAGAAGGGGTTTGAAGAAATTATCTTGGTAGTGCTCATGGTGCCTGATATTTATTACCCTTCAAAGAAAAGCGACGATTTTTGTGAAGACGTTTGTGGCGAG : CAGTCTACCCCTGGAATAGTAAGCATGTCAAGATTAAGGTGTATGCTTCGAGGATTGGATTTAAAGGCTATTGTCTTCTTGGTTGTTTTTGTGCCATTATGTATAGTTGGTATATACTTGCATGGACAGAAGATTACCTACTTCCTCCGACCAATATGGCAATCTCCTCCAAAGCCCTTTATTGAACTTACCCATTATTATCATGAGAATGTCTCCATGGAGAATCTTTGCAAGCAACATGGATGGGGAATTCGTGAATATCCTAGGCGTGTCTATGATGCTGTTTTGTTTAGTAATGAAGTGGACATGCTTACTATCAGATGGAAGGAATTGTATCCTTACATCACACAGTTTGTTCTGCTCGAGTCAAACTCCACGTTTACTGGATTACCAAAACCATTTACTTTTGCTATTAACCGGGACCAATTTAAGTTTGTTGAGCCTCGATTGACTTATGGAACCATTGGAGGAAGATTCAGGAAAGGTGAAAATCCGTTTGTTGAAGAGGCATATCAGAGAGTAGCACTCGACCAGCTTTTGAGAATAGCTGGAATAGAGGATGATGATTTGCTGATAATGTCCGATGTTGATGAAATTCCTAGCAGGCACACCATCGATCTTTTAAGATGGTGTGATGACATTCCTCCAATTCTTCACCTTCATTTTAGGAATTACTTGTACTCTTTTGAATTTGAGCTTAAGCACAGAAGTTGGAGAGCTTCAGTCCACAGGTATCAGAGTGGCAAGACTCGATACGTACACTATCGTCAGACTGATTACCTTTTGGCAGATTCAGGTTGGCATTGTAGCTTTTGCTTCCGCCACATCTCTGACTTCATATTCAAAATGAAAGCTTACAGCCACACTGATAGAGTGAGGTTCTTGCATTATTTGAACCCTAGAAGAATACAAGATATCATTTGTGAAGGATCTGATTTATATGACATGCTTCCTGAGGAGTACACATTCAAGGATATCATTGGTAACATGGGACCTCTACCTCATTCTTACTCAGCCGTGCATCTTCCTGCGCATTTGCTGGATAATCCCGAGAAGTATAAGTATCTCTTGCCTGGGAACTGCAAAAGAGAAAGTGGCTAAGTTGTTACCACAAAGTTGGACGCATTTTCGTAACATAGGAGGTGTTCATGTGCC</gDNA_template>
            <first_frame> R  *  R  R  R  Y  S  V  G  G  G  W  G  V  G  L  H  R  V  C  L  Y  I  *  F  I  C  R  K  S  V  E  L  E  E  K  E  E  E  H  N  K  R  L  Q  F  S  V  F  L  Y  S  Q  I  Q  S  T  K  K  K  K  L  *  N  N  F  P  S  H  *  *  W  Q  F  H  C  C  K  F  E  R  E  G  G  F  F  F  L  Q  T  I  S  L  F  I  I  R  L  F  S  E  F  Y  R  R  *  Q  K  I  L  K  K  R  G  K  K  L  E  E  A  K  V  S  L  A  I  F  R  E  G  V  *  R  N  Y  L  G  S  A  H  G  A  *  Y  L  L  P  F  K  E  K  R  R  F  L  *  R  R  L  W  R   : A  V  Y  P  W  N  S  K  H  V  K  I  K  V  Y  A  S  R  I  G  F  K  G  Y  C  L  L  G  C  F  C  A  I  M  Y  S  W  Y  I  L  A  W  T  E  D  Y  L  L  P  P  T  N  M  A  I  S  S  K  A  L  Y  *  T  Y  P  L  L  S  *  E  C  L  H  G  E  S  L  Q  A  T  W  M  G  N  S  *  I  S  *  A  C  L  *  C  C  F  V  *  *  *  S  G  H  A  Y  Y  Q  M  E  G  I  V  S  L  H  H  T  V  C  S  A  R  V  K  L  H  V  Y  W  I  T  K  T  I  Y  F  C  Y  *  P  G  P  I  *  V  C  *  A  S  I  D  L  W  N  H  W  R  K  I  Q  E  R  *  K  S  V  C  *  R  G  I  S  E  S  S  T  R  P  A  F  E  N  S  W  N  R  G  *  *  F  A  D  N  V  R  C  *  *  N  S  *  Q  A  H  H  R  S  F  K  M  V  *  *  H  S  S  N  S  S  P  S  F  *  E  L  L  V  L  F  *  I  *  A  *  A  Q  K  L  E  S  F  S  P  Q  V  S  E  W  Q  D  S  I  R  T  L  S  S  D  *  L  P  F  G  R  F  R  L  A  L  *  L  L  L  P  P  H  L  *  L  H  I  Q  N  E  S  L  Q  P  H  *  *  S  E  V  L  A  L  F  E  P  *  K  N  T  R  Y  H  L  *  R  I  *  F  I  *  H  A  S  *  G  V  H  I  Q  G  Y  H  W  *  H  G  T  S  T  S  F  L  L  S  R  A  S  S  C  A  F  A  G  *  S  R  E  V  *  V  S  L  A  W  E  L  Q  K  R  K  W  L  S  C  Y  H  K  V  G  R  I  F  V  T  *  E  V  F  M  C  </first_frame>
            <second_frame>  G  E  G  E  D  T  A  W  V  G  G  G  G  W  G  C  I  V  C  V  S  I  Y  S  L  S  V  E  R  V  L  N  *  K  K  K  K  K  N  T  T  N  G  Y  N  L  A  C  F  Y  I  V  K  F  N  P  L  R  K  K  N  C  K  I  T  S  P  L  I  D  N  G  N  S  I  A  V  N  L  R  G  K  G  V  S  F  F  F  R  Q  S  L  F  S  *  F  V  Y  F  L  N  F  T  E  G  N  K  K  S  *  K  R  E  E  K  N  W  K  K  P  K  F  H  W  P  F  L  E  K  G  F  E  E  I  I  L  V  V  L  M  V  P  D  I  Y  Y  P  S  K  K  S  D  D  F  C  E  D  V  C  G  E  :  Q  S  T  P  G  I  V  S  M  S  R  L  R  C  M  L  R  G  L  D  L  K  A  I  V  F  L  V  V  F  V  P  L  C  I  V  G  I  Y  L  H  G  Q  K  I  T  Y  F  L  R  P  I  W  Q  S  P  P  K  P  F  I  E  L  T  H  Y  Y  H  E  N  V  S  M  E  N  L  C  K  Q  H  G  W  G  I  R  E  Y  P  R  R  V  Y  D  A  V  L  F  S  N  E  V  D  M  L  T  I  R  W  K  E  L  Y  P  Y  I  T  Q  F  V  L  L  E  S  N  S  T  F  T  G  L  P  K  P  F  T  F  A  I  N  R  D  Q  F  K  F  V  E  P  R  L  T  Y  G  T  I  G  G  R  F  R  K  G  E  N  P  F  V  E  E  A  Y  Q  R  V  A  L  D  Q  L  L  R  I  A  G  I  E  D  D  D  L  L  I  M  S  D  V  D  E  I  P  S  R  H  T  I  D  L  L  R  W  C  D  D  I  P  P  I  L  H  L  H  F  R  N  Y  L  Y  S  F  E  F  E  L  K  H  R  S  W  R  A  S  V  H  R  Y  Q  S  G  K  T  R  Y  V  H  Y  R  Q  T  D  Y  L  L  A  D  S  G  W  H  C  S  F  C  F  R  H  I  S  D  F  I  F  K  M  K  A  Y  S  H  T  D  R  V  R  F  L  H  Y  L  N  P  R  R  I  Q  D  I  I  C  E  G  S  D  L  Y  D  M  L  P  E  E  Y  T  F  K  D  I  I  G  N  M  G  P  L  P  H  S  Y  S  A  V  H  L  P  A  H  L  L  D  N  P  E  K  Y  K  Y  L  L  P  G  N  C  K  R  E  S  G  *  V  V  T  T  K  L  D  A  F  S  *  H  R  R  C  S  C  A </second_frame>
            <third_frame>   V  K  E  K  I  Q  R  G  W  G  V  G  G  G  V  A  S  C  V  S  L  Y  I  V  Y  L  *  K  E  C  *  I  R  R  K  R  R  R  T  Q  Q  T  A  T  I  *  R  V  F  I  *  S  N  S  I  H  *  E  K  K  I  V  K  *  L  P  L  S  L  I  M  A  I  P  L  L  *  I  *  E  G  R  G  F  L  F  S  S  D  N  L  S  F  H  N  S  F  I  F  *  I  L  Q  K  V  T  K  N  L  E  K  E  R  K  K  I  G  R  S  Q  S  F  I  G  H  F  *  R  R  G  L  K  K  L  S  W  *  C  S  W  C  L  I  F  I  T  L  Q  R  K  A  T  I  F  V  K  T  F  V  A  S :   S  L  P  L  E  *  *  A  C  Q  D  *  G  V  C  F  E  D  W  I  *  R  L  L  S  S  W  L  F  L  C  H  Y  V  *  L  V  Y  T  C  M  D  R  R  L  P  T  S  S  D  Q  Y  G  N  L  L  Q  S  P  L  L  N  L  P  I  I  I  M  R  M  S  P  W  R  I  F  A  S  N  M  D  G  E  F  V  N  I  L  G  V  S  M  M  L  F  C  L  V  M  K  W  T  C  L  L  S  D  G  R  N  C  I  L  T  S  H  S  L  F  C  S  S  Q  T  P  R  L  L  D  Y  Q  N  H  L  L  L  L  L  T  G  T  N  L  S  L  L  S  L  D  *  L  M  E  P  L  E  E  D  S  G  K  V  K  I  R  L  L  K  R  H  I  R  E  *  H  S  T  S  F  *  E  *  L  E  *  R  M  M  I  C  *  *  C  P  M  L  M  K  F  L  A  G  T  P  S  I  F  *  D  G  V  M  T  F  L  Q  F  F  T  F  I  L  G  I  T  C  T  L  L  N  L  S  L  S  T  E  V  G  E  L  Q  S  T  G  I  R  V  A  R  L  D  T  Y  T  I  V  R  L  I  T  F  W  Q  I  Q  V  G  I  V  A  F  A  S  A  T  S  L  T  S  Y  S  K  *  K  L  T  A  T  L  I  E  *  G  S  C  I  I  *  T  L  E  E  Y  K  I  S  F  V  K  D  L  I  Y  M  T  C  F  L  R  S  T  H  S  R  I  S  L  V  T  W  D  L  Y  L  I  L  T  Q  P  C  I  F  L  R  I  C  W  I  I  P  R  S  I  S  I  S  C  L  G  T  A  K  E  K  V  A  K  L  L  P  Q  S  W  T  H  F  R  N  I  G  G  V  H  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17519" stop="17671"/>
                    <exon start="18159" stop="19259"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1251</number_coding_nucleotides>
                  <number_encoded_amino_acids>417</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KREEKNWKKPKFHWPFLEKGFEEIILVVLMVPDIYYPSKKSDDFCEDVCGEQSTPGIVSMSRLRCMLRGLDLKAIVFLVVFVPLCIVGIYLHGQKITYFLRPIWQSPPKPFIELTHYYHENVSMENLCKQHGWGIREYPRRVYDAVLFSNEVDMLTIRWKELYPYITQFVLLESNSTFTGLPKPFTFAINRDQFKFVEPRLTYGTIGGRFRKGENPFVEEAYQRVALDQLLRIAGIEDDDLLIMSDVDEIPSRHTIDLLRWCDDIPPILHLHFRNYLYSFEFELKHRSWRASVHRYQSGKTRYVHYRQTDYLLADSGWHCSFCFRHISDFIFKMKAYSHTDRVRFLHYLNPRRIQDIICEGSDLYDMLPEEYTFKDIIGNMGPLPHSYSAVHLPAHLLDNPEKYKYLLPGNCKRESG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="23911" PGL_stop="20619"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23911" e_stop="23849"/>
            <exon e_start="23015" e_stop="22883"/>
            <exon e_start="22685" e_stop="22499"/>
            <exon e_start="22227" e_stop="21731"/>
            <exon e_start="21559" e_stop="21257"/>
            <exon e_start="21165" e_stop="20619"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.909" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.958" e_score="0.995"/>
          <exon-intron don_prob="0.993" acc_prob="1.000" e_score="0.971"/>
          <exon-intron don_prob="0.999" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="23911" e_stop="23849" e_length="63"/>
          </exon>
          <intron i_serial="1" don_prob="0.909" acc_prob="0.999">
            <gDNA_intron_boundary i_start="23848" i_stop="23016" i_length="833"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="23015" e_stop="22883" e_length="133"/>
          </exon>
          <intron i_serial="2" don_prob="0.985" acc_prob="0.992">
            <gDNA_intron_boundary i_start="22882" i_stop="22686" i_length="197"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="22685" e_stop="22499" e_length="187"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.958">
            <gDNA_intron_boundary i_start="22498" i_stop="22228" i_length="271"/>
          </intron>
          <exon e_serial="4" e_score="0.971">
            <gDNA_exon_boundary e_start="22227" e_stop="21731" e_length="497"/>
          </exon>
          <intron i_serial="4" don_prob="0.993" acc_prob="1.000">
            <gDNA_intron_boundary i_start="21730" i_stop="21560" i_length="171"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="21559" e_stop="21257" e_length="303"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.991">
            <gDNA_intron_boundary i_start="21256" i_stop="21166" i_length="91"/>
          </intron>
          <exon e_serial="6" e_score="0.995">
            <gDNA_exon_boundary e_start="21165" e_stop="20619" e_length="547"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23911" stop="23849"/>
              <exon start="23015" stop="22883"/>
              <exon start="22685" stop="22499"/>
              <exon start="22227" stop="21889"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586918" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21955" stop="21731"/>
              <exon start="21559" stop="21257"/>
              <exon start="21165" stop="20619"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574194" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAACTCAGATTCACCGAATTTTCTTCAAAAATCTTGAAATTTTTTTCGATCCTTTATGGGAAG : GTCTTGGCTTATTAATGGCAGAGGGCTTGCAAGTAAAGTTAAAAATGCCAGTGCCCCTGCTGCTCATCAAATCAAAGATTGTGGGGCAAAGCGGCAATGCCCAAACTGCAACTACTCTATTGATAACAAAGAT : GTTTCTCATGAATGGCCTGGTCTACCTGTTGGTGTGAAATTTGATCCATCTGATGCTGAGCTCGTGGAGCATTTAGAAGCAAAGTGTGGGGTGGGAAATTCAGAACAACACAAATTCATTGATGAGTTCATCCCGACCCTTGAGGTTCACGAAGGAATTTGCTACACCCATCCTGAAAATCTTCCTG : GTTCAAAAAAGGATGGAAGTAGCATTCACTTCTTTTATCGCATTACTAATGCATATGCAACTGGTAAACGGAAGCGTAGAAAGATTCATGATGAAAATAATTTGATGAAAGAACATGTCCGCTGGCACAAGACTGGAAAGACCAAGGTTGTTATGGAGAATGGATTCCAAAAGGGATGCAAGAAGGTCATGGTTCTCTATCAAACTCTTAAGAAGGGGTCGAAGCAGGAAAAGACTAATTGGGTAATGCATCAGTACCACCTGGGCCCTGATGAAGATGAAAAAGAAGGTGAATATGTGGTTTCAAAAATCTTTTACCAACAGCAGAAGCAATCTGTCAAGGCCAATGATTGTTGTGACAATGAGGAAGCCAGTGTGGGAGCGAATCAAACTGGGCCTACAACTCCCAAGACGGTTACACCCAATCCCCCTCGAGATGGAGAAACCCCTTCCTATGATGATATTTTAGATGAATCTTTACCCTTCTCACCTGATCAG : GAAGTGGAAGTTGCCAAAGAACCAGGGCAGCCTTCTGATGCTAAAATTAAGTGTGAGATGGAGTACTCCACATGCTTGGCTGGAGAATCACAAGCAGCTGATGCAAATGATGTTCATAATTCTCTGTTGTGTGATGAACATAATGATTATTCACTTCTTGATAGTTTTGGACCCAATCTTGGCCCTTCTGTTGACTACACTCATAGCACTTGCCATTTACCAGAAGTGAATGGTAACACAACCTGTGGAATTTCAGAATTGGATAACTTGGAACTGGATAGTCCTCCAGACTTCCAACTTGCA : GATTTGCCGTTTGGTTCTCAAGAGAATATCTTTAGTTGGTTGGACCGGCTATAGAGATGATGGCAATGAGATAATGCTTTATGCATTCTCGGATGGAGAATATACTTCAACAAGATTGTGTTCTTGAACAGCTACAGGAATCTTTCTTCAATTTCAGTTTTCGTGGTTTCAACAAATCCTTATCAAAAAATGCTCATTTTCCCACCATTACTACAGCCCACAGAAGAAAAGAAAACAGAAATATTGCTATATCTAAAATGCTGGACGATATACAAGTTGAAGGAGTTGTTGCAAGAACCTACTACAATATACCAAGGATCAACGTTTGGGAGTTGGAACTGTTACACCTTAGCTTATTGAATTGGCTCAAACTTTGATTTAATGTTCTGATTTCTCTTGTCAAGACTCTCATATCCCTTCTGTTCTATTCAGCATGTTCTGTTCTGACCCCCAAATACTTCGGGAAGTTTCTCGTTTGTGCTAGTTTATATTTTACTTGAAGTGTGGACAGGATTCTATTGCTTTCTTATGCATCTTTCATTGTCTG</gDNA_template>
            <first_frame> K  L  R  F  T  E  F  S  S  K  I  L  K  F  F  S  I  L  Y  G  K  :  V  L  A  Y  *  W  Q  R  A  C  K  *  S  *  K  C  Q  C  P  C  C  S  S  N  Q  R  L  W  G  K  A  A  M  P  K  L  Q  L  L  Y  *  *  Q  R   : C  F  S  *  M  A  W  S  T  C  W  C  E  I  *  S  I  *  C  *  A  R  G  A  F  R  S  K  V  W  G  G  K  F  R  T  T  Q  I  H  *  *  V  H  P  D  P  *  G  S  R  R  N  L  L  H  P  S  *  K  S  S  W :   F  K  K  G  W  K  *  H  S  L  L  L  S  H  Y  *  C  I  C  N  W  *  T  E  A  *  K  D  S  *  *  K  *  F  D  E  R  T  C  P  L  A  Q  D  W  K  D  Q  G  C  Y  G  E  W  I  P  K  G  M  Q  E  G  H  G  S  L  S  N  S  *  E  G  V  E  A  G  K  D  *  L  G  N  A  S  V  P  P  G  P  *  *  R  *  K  R  R  *  I  C  G  F  K  N  L  L  P  T  A  E  A  I  C  Q  G  Q  *  L  L  *  Q  *  G  S  Q  C  G  S  E  S  N  W  A  Y  N  S  Q  D  G  Y  T  Q  S  P  S  R  W  R  N  P  F  L  *  *  Y  F  R  *  I  F  T  L  L  T  *  S   : G  S  G  S  C  Q  R  T  R  A  A  F  *  C  *  N  *  V  *  D  G  V  L  H  M  L  G  W  R  I  T  S  S  *  C  K  *  C  S  *  F  S  V  V  *  *  T  *  *  L  F  T  S  *  *  F  W  T  Q  S  W  P  F  C  *  L  H  S  *  H  L  P  F  T  R  S  E  W  *  H  N  L  W  N  F  R  I  G  *  L  G  T  G  *  S  S  R  L  P  T  C   : R  F  A  V  W  F  S  R  E  Y  L  *  L  V  G  P  A  I  E  M  M  A  M  R  *  C  F  M  H  S  R  M  E  N  I  L  Q  Q  D  C  V  L  E  Q  L  Q  E  S  F  F  N  F  S  F  R  G  F  N  K  S  L  S  K  N  A  H  F  P  T  I  T  T  A  H  R  R  K  E  N  R  N  I  A  I  S  K  M  L  D  D  I  Q  V  E  G  V  V  A  R  T  Y  Y  N  I  P  R  I  N  V  W  E  L  E  L  L  H  L  S  L  L  N  W  L  K  L  *  F  N  V  L  I  S  L  V  K  T  L  I  S  L  L  F  Y  S  A  C  S  V  L  T  P  K  Y  F  G  K  F  L  V  C  A  S  L  Y  F  T  *  S  V  D  R  I  L  L  L  S  Y  A  S  F  I  V   </first_frame>
            <second_frame>  N  S  D  S  P  N  F  L  Q  K  S  *  N  F  F  R  S  F  M  G  R :   S  W  L  I  N  G  R  G  L  A  S  K  V  K  N  A  S  A  P  A  A  H  Q  I  K  D  C  G  A  K  R  Q  C  P  N  C  N  Y  S  I  D  N  K  D  :  V  S  H  E  W  P  G  L  P  V  G  V  K  F  D  P  S  D  A  E  L  V  E  H  L  E  A  K  C  G  V  G  N  S  E  Q  H  K  F  I  D  E  F  I  P  T  L  E  V  H  E  G  I  C  Y  T  H  P  E  N  L  P   : G  S  K  K  D  G  S  S  I  H  F  F  Y  R  I  T  N  A  Y  A  T  G  K  R  K  R  R  K  I  H  D  E  N  N  L  M  K  E  H  V  R  W  H  K  T  G  K  T  K  V  V  M  E  N  G  F  Q  K  G  C  K  K  V  M  V  L  Y  Q  T  L  K  K  G  S  K  Q  E  K  T  N  W  V  M  H  Q  Y  H  L  G  P  D  E  D  E  K  E  G  E  Y  V  V  S  K  I  F  Y  Q  Q  Q  K  Q  S  V  K  A  N  D  C  C  D  N  E  E  A  S  V  G  A  N  Q  T  G  P  T  T  P  K  T  V  T  P  N  P  P  R  D  G  E  T  P  S  Y  D  D  I  L  D  E  S  L  P  F  S  P  D  Q  :  E  V  E  V  A  K  E  P  G  Q  P  S  D  A  K  I  K  C  E  M  E  Y  S  T  C  L  A  G  E  S  Q  A  A  D  A  N  D  V  H  N  S  L  L  C  D  E  H  N  D  Y  S  L  L  D  S  F  G  P  N  L  G  P  S  V  D  Y  T  H  S  T  C  H  L  P  E  V  N  G  N  T  T  C  G  I  S  E  L  D  N  L  E  L  D  S  P  P  D  F  Q  L  A  :  D  L  P  F  G  S  Q  E  N  I  F  S  W  L  D  R  L  *  R  *  W  Q  *  D  N  A  L  C  I  L  G  W  R  I  Y  F  N  K  I  V  F  L  N  S  Y  R  N  L  S  S  I  S  V  F  V  V  S  T  N  P  Y  Q  K  M  L  I  F  P  P  L  L  Q  P  T  E  E  K  K  T  E  I  L  L  Y  L  K  C  W  T  I  Y  K  L  K  E  L  L  Q  E  P  T  T  I  Y  Q  G  S  T  F  G  S  W  N  C  Y  T  L  A  Y  *  I  G  S  N  F  D  L  M  F  *  F  L  L  S  R  L  S  Y  P  F  C  S  I  Q  H  V  L  F  *  P  P  N  T  S  G  S  F  S  F  V  L  V  Y  I  L  L  E  V  W  T  G  F  Y  C  F  L  M  H  L  S  L  S  </second_frame>
            <third_frame>   T  Q  I  H  R  I  F  F  K  N  L  E  I  F  F  D  P  L  W  E   : G  L  G  L  L  M  A  E  G  L  Q  V  K  L  K  M  P  V  P  L  L  L  I  K  S  K  I  V  G  Q  S  G  N  A  Q  T  A  T  T  L  L  I  T  K  M :   F  L  M  N  G  L  V  Y  L  L  V  *  N  L  I  H  L  M  L  S  S  W  S  I  *  K  Q  S  V  G  W  E  I  Q  N  N  T  N  S  L  M  S  S  S  R  P  L  R  F  T  K  E  F  A  T  P  I  L  K  I  F  L  :  V  Q  K  R  M  E  V  A  F  T  S  F  I  A  L  L  M  H  M  Q  L  V  N  G  S  V  E  R  F  M  M  K  I  I  *  *  K  N  M  S  A  G  T  R  L  E  R  P  R  L  L  W  R  M  D  S  K  R  D  A  R  R  S  W  F  S  I  K  L  L  R  R  G  R  S  R  K  R  L  I  G  *  C  I  S  T  T  W  A  L  M  K  M  K  K  K  V  N  M  W  F  Q  K  S  F  T  N  S  R  S  N  L  S  R  P  M  I  V  V  T  M  R  K  P  V  W  E  R  I  K  L  G  L  Q  L  P  R  R  L  H  P  I  P  L  E  M  E  K  P  L  P  M  M  I  F  *  M  N  L  Y  P  S  H  L  I  R :   K  W  K  L  P  K  N  Q  G  S  L  L  M  L  K  L  S  V  R  W  S  T  P  H  A  W  L  E  N  H  K  Q  L  M  Q  M  M  F  I  I  L  C  C  V  M  N  I  M  I  I  H  F  L  I  V  L  D  P  I  L  A  L  L  L  T  T  L  I  A  L  A  I  Y  Q  K  *  M  V  T  Q  P  V  E  F  Q  N  W  I  T  W  N  W  I  V  L  Q  T  S  N  L  Q :   I  C  R  L  V  L  K  R  I  S  L  V  G  W  T  G  Y  R  D  D  G  N  E  I  M  L  Y  A  F  S  D  G  E  Y  T  S  T  R  L  C  S  *  T  A  T  G  I  F  L  Q  F  Q  F  S  W  F  Q  Q  I  L  I  K  K  C  S  F  S  H  H  Y  Y  S  P  Q  K  K  R  K  Q  K  Y  C  Y  I  *  N  A  G  R  Y  T  S  *  R  S  C  C  K  N  L  L  Q  Y  T  K  D  Q  R  L  G  V  G  T  V  T  P  *  L  I  E  L  A  Q  T  L  I  *  C  S  D  F  S  C  Q  D  S  H  I  P  S  V  L  F  S  M  F  C  S  D  P  Q  I  L  R  E  V  S  R  L  C  *  F  I  F  Y  L  K  C  G  Q  D  S  I  A  F  L  C  I  F  H  C  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23874" stop="23849"/>
                    <exon start="23015" stop="22883"/>
                    <exon start="22685" stop="22499"/>
                    <exon start="22227" stop="21731"/>
                    <exon start="21559" stop="21257"/>
                    <exon start="21165" stop="21112"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1197</number_coding_nucleotides>
                  <number_encoded_amino_acids>399</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NFFRSFMGRSWLINGRGLASKVKNASAPAAHQIKDCGAKRQCPNCNYSIDNKDVSHEWPGLPVGVKFDPSDAELVEHLEAKCGVGNSEQHKFIDEFIPTLEVHEGICYTHPENLPGSKKDGSSIHFFYRITNAYATGKRKRRKIHDENNLMKEHVRWHKTGKTKVVMENGFQKGCKKVMVLYQTLKKGSKQEKTNWVMHQYHLGPDEDEKEGEYVVSKIFYQQQKQSVKANDCCDNEEASVGANQTGPTTPKTVTPNPPRDGETPSYDDILDESLPFSPDQEVEVAKEPGQPSDAKIKCEMEYSTCLAGESQAADANDVHNSLLCDEHNDYSLLDSFGPNLGPSVDYTHSTCHLPEVNGNTTCGISELDNLELDSPPDFQLADLPFGSQENIFSWLDRL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21091" stop="20789"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>300</number_coding_nucleotides>
                  <number_encoded_amino_acids>100</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CFMHSRMENILQQDCVLEQLQESFFNFSFRGFNKSLSKNAHFPTITTAHRRKENRNIAISKMLDDIQVEGVVARTYYNIPRINVWELELLHLSLLNWLKL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="33053" PGL_stop="28950"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="33053" e_stop="32481"/>
            <exon e_start="31966" e_stop="31834"/>
            <exon e_start="31718" e_stop="31523"/>
            <exon e_start="30467" e_stop="30343"/>
            <exon e_start="30241" e_stop="30083"/>
            <exon e_start="29580" e_stop="28950"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="0.988"/>
          <exon-intron don_prob="0.760" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.991" e_score="0.990"/>
          <exon-intron don_prob="0.905" acc_prob="0.993" e_score="0.992"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="0.981"/>
          <exon-only e_score="0.965"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="33053" e_stop="32481" e_length="573"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="32480" i_stop="31967" i_length="514"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="31966" e_stop="31834" e_length="133"/>
          </exon>
          <intron i_serial="2" don_prob="0.760" acc_prob="0.993">
            <gDNA_intron_boundary i_start="31833" i_stop="31719" i_length="115"/>
          </intron>
          <exon e_serial="3" e_score="0.990">
            <gDNA_exon_boundary e_start="31718" e_stop="31523" e_length="196"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.991">
            <gDNA_intron_boundary i_start="31522" i_stop="30468" i_length="1055"/>
          </intron>
          <exon e_serial="4" e_score="0.992">
            <gDNA_exon_boundary e_start="30467" e_stop="30343" e_length="125"/>
          </exon>
          <intron i_serial="4" don_prob="0.905" acc_prob="0.993">
            <gDNA_intron_boundary i_start="30342" i_stop="30242" i_length="101"/>
          </intron>
          <exon e_serial="5" e_score="0.981">
            <gDNA_exon_boundary e_start="30241" e_stop="30083" e_length="159"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="30082" i_stop="29581" i_length="502"/>
          </intron>
          <exon e_serial="6" e_score="0.965">
            <gDNA_exon_boundary e_start="29580" e_stop="28950" e_length="631"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33053" stop="32481"/>
              <exon start="31966" stop="31834"/>
              <exon start="31718" stop="31523"/>
              <exon start="30467" stop="30343"/>
              <exon start="30241" stop="30083"/>
              <exon start="29580" stop="28950"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568149" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAACTAAAGTCTCCTAATTGCTTAACATTCATCTCTATCTTTCATTATCTTTCCTCTTATTCTACTCACTCTTCACCTTATTTATCTCTCTTTTTTCTTCTCCTCCTCCTGATAGCCTCAATTGATCCACCAACCAAACCAGCTGATCTACTTCTTCTGAACTTTTTATTTTTCAATTGAACCAGTAGGAATTTCTGGGGTTTCTTGTTTGTGGGGTTCATTTTTCTCTTGTTTTAAACACAAGGGCATGTTGTAGATTTGTTTCTGGTTTGTGGGTCTATGAGTTTTCTGGTTCTTGGTCATAAAGTCTTGAACTTTTTTTGCTGCTTCAAATGCTAGGTGAATTGTTATTAAGTGTTTCGAATTTGGTAGTTAAATAGATGTGCTACTAGTTCATTCTTGAAGTTATTATAGGGGGAGAGTATTTGGGGTCTGGAAAATGGGATCTGCTAATGGGTTTTACTCCGGAGAAGAAGAGTTCAATTTGGAGGCGAAATGGTTAATTGATCCGAAGCTTCTGTTCGTTGGTCCTAAGATTGGAGAGGGTGCTCATGCCAAAGTGTATGAGGGAAA : ATACAGAAACCAGAATGTAGCAATAAAGATTGTGCATAAAGGGGAGACACCTGAGGAGATTGCCAAGAGGGAATCTCGTTTTGGAAGGGAGGTTGCTATGTTATCCAGAGTTCAGCACAAGAACTTAGTGAAG : TTCATAGGAGCTTGCAAGGAGCCTGTCATGGTCATAGTAACTGAACTTCTTCTCGGGGGGACGCTGAGGAAATACTTGCTGAACCTGAGGCCAAGGTGCTTGGATACTGGTGTCGCTATTAGATTTGCCCTTGATATAGCCCGTGCAATGGAGTGCTTGCACTCTCATGGTATCATTCATCGCGACCTAAAACCTG : AGAACTTGCTTTTGACTGCGGACCACAAAACTGTCAAACTTGCGGATTTTGGTTTGGCAAGAGAAGAATCATTGACAGAGATGATGACTGCTGAAACTGGAACCTATCGCTGGATGGCTCCAGAG : CTCTACAGCACGGTCACTTTAAGACACGGCGAGAAGAAGCATTATAATCATAAAGTAGATGCCTACAGTTTTGCGATCGTTCTGTGGGAACTCGTACATAACAAATTACCATTTGAGGGCATGTCTAATTTACAGGCTGCTTATGCAGCTGCTTTTAAG : AATGTGAGACCAAGTGCAGATGATCTCCCCGAGGATTTGGCAGTAATTGTAACTTCGTGTTGGAAAGAGGATCCAAACACTCGTCCCAACTTCACTCAGATAATACAGATGCTTCTTCATTTTCTCTCTTCAGTTTCCCCTCCGGAACCAGTAATACCAGCTAGGATTTTCACTTCAGAGAATCATGTATTACCACCGGAGTCTCCAGGTACCAGCTCGTTAATGTCCAAGCGTGATGACTCGGTTGAGACCCCTAAAACACCCATGGAGAATCAGCCAAGAGGTTTCTTCTTCTGTTTTAACCAATGCTACTGATCCCCAAGGGAAAAGTTTGTTAATTCTCTAGAAAATACTCGGAGTTGAGCTATCTTATTATACAATAGTAAGCTCACAAAATGTTTAGCCCAGATATGTCACTAGATAACTTAGCTTTTGGTCTTTCTTCCACATAAGATAAAAAGGTACACTTTTGAGTTTTAGCCATGGTAATTCAAAGGTGAAGGACGTTGTTGCAGGAAGATGCATGATCTAGACTCGCGTTCTGACTTAATTGTGAGGAGTTGGGTTGCTGTGATGTATATTATAGTTGTAAAAAATAAGGTCCATCCAAAGACCTGTACTCCTATATTTT</gDNA_template>
            <first_frame> Q  L  K  S  P  N  C  L  T  F  I  S  I  F  H  Y  L  S  S  Y  S  T  H  S  S  P  Y  L  S  L  F  F  L  L  L  L  L  I  A  S  I  D  P  P  T  K  P  A  D  L  L  L  L  N  F  L  F  F  N  *  T  S  R  N  F  W  G  F  L  F  V  G  F  I  F  L  L  F  *  T  Q  G  H  V  V  D  L  F  L  V  C  G  S  M  S  F  L  V  L  G  H  K  V  L  N  F  F  C  C  F  K  C  *  V  N  C  Y  *  V  F  R  I  W  *  L  N  R  C  A  T  S  S  F  L  K  L  L  *  G  E  S  I  W  G  L  E  N  G  I  C  *  W  V  L  L  R  R  R  R  V  Q  F  G  G  E  M  V  N  *  S  E  A  S  V  R  W  S  *  D  W  R  G  C  S  C  Q  S  V  *  G  K  :  I  Q  K  P  E  C  S  N  K  D  C  A  *  R  G  D  T  *  G  D  C  Q  E  G  I  S  F  W  K  G  G  C  Y  V  I  Q  S  S  A  Q  E  L  S  E   : V  H  R  S  L  Q  G  A  C  H  G  H  S  N  *  T  S  S  R  G  D  A  E  E  I  L  A  E  P  E  A  K  V  L  G  Y  W  C  R  Y  *  I  C  P  *  Y  S  P  C  N  G  V  L  A  L  S  W  Y  H  S  S  R  P  K  T  * :   E  L  A  F  D  C  G  P  Q  N  C  Q  T  C  G  F  W  F  G  K  R  R  I  I  D  R  D  D  D  C  *  N  W  N  L  S  L  D  G  S  R   : A  L  Q  H  G  H  F  K  T  R  R  E  E  A  L  *  S  *  S  R  C  L  Q  F  C  D  R  S  V  G  T  R  T  *  Q  I  T  I  *  G  H  V  *  F  T  G  C  L  C  S  C  F  *   : E  C  E  T  K  C  R  *  S  P  R  G  F  G  S  N  C  N  F  V  L  E  R  G  S  K  H  S  S  Q  L  H  S  D  N  T  D  A  S  S  F  S  L  F  S  F  P  S  G  T  S  N  T  S  *  D  F  H  F  R  E  S  C  I  T  T  G  V  S  R  Y  Q  L  V  N  V  Q  A  *  *  L  G  *  D  P  *  N  T  H  G  E  S  A  K  R  F  L  L  L  F  *  P  M  L  L  I  P  K  G  K  V  C  *  F  S  R  K  Y  S  E  L  S  Y  L  I  I  Q  *  *  A  H  K  M  F  S  P  D  M  S  L  D  N  L  A  F  G  L  S  S  T  *  D  K  K  V  H  F  *  V  L  A  M  V  I  Q  R  *  R  T  L  L  Q  E  D  A  *  S  R  L  A  F  *  L  N  C  E  E  L  G  C  C  D  V  Y  Y  S  C  K  K  *  G  P  S  K  D  L  Y  S  Y  I   </first_frame>
            <second_frame>  N  *  S  L  L  I  A  *  H  S  S  L  S  F  I  I  F  P  L  I  L  L  T  L  H  L  I  Y  L  S  F  F  F  S  S  S  *  *  P  Q  L  I  H  Q  P  N  Q  L  I  Y  F  F  *  T  F  Y  F  S  I  E  P  V  G  I  S  G  V  S  C  L  W  G  S  F  F  S  C  F  K  H  K  G  M  L  *  I  C  F  W  F  V  G  L  *  V  F  W  F  L  V  I  K  S  *  T  F  F  A  A  S  N  A  R  *  I  V  I  K  C  F  E  F  G  S  *  I  D  V  L  L  V  H  S  *  S  Y  Y  R  G  R  V  F  G  V  W  K  M  G  S  A  N  G  F  Y  S  G  E  E  E  F  N  L  E  A  K  W  L  I  D  P  K  L  L  F  V  G  P  K  I  G  E  G  A  H  A  K  V  Y  E  G  K :   Y  R  N  Q  N  V  A  I  K  I  V  H  K  G  E  T  P  E  E  I  A  K  R  E  S  R  F  G  R  E  V  A  M  L  S  R  V  Q  H  K  N  L  V  K  :  F  I  G  A  C  K  E  P  V  M  V  I  V  T  E  L  L  L  G  G  T  L  R  K  Y  L  L  N  L  R  P  R  C  L  D  T  G  V  A  I  R  F  A  L  D  I  A  R  A  M  E  C  L  H  S  H  G  I  I  H  R  D  L  K  P   : E  N  L  L  L  T  A  D  H  K  T  V  K  L  A  D  F  G  L  A  R  E  E  S  L  T  E  M  M  T  A  E  T  G  T  Y  R  W  M  A  P  E  :  L  Y  S  T  V  T  L  R  H  G  E  K  K  H  Y  N  H  K  V  D  A  Y  S  F  A  I  V  L  W  E  L  V  H  N  K  L  P  F  E  G  M  S  N  L  Q  A  A  Y  A  A  A  F  K  :  N  V  R  P  S  A  D  D  L  P  E  D  L  A  V  I  V  T  S  C  W  K  E  D  P  N  T  R  P  N  F  T  Q  I  I  Q  M  L  L  H  F  L  S  S  V  S  P  P  E  P  V  I  P  A  R  I  F  T  S  E  N  H  V  L  P  P  E  S  P  G  T  S  S  L  M  S  K  R  D  D  S  V  E  T  P  K  T  P  M  E  N  Q  P  R  G  F  F  F  C  F  N  Q  C  Y  *  S  P  R  E  K  F  V  N  S  L  E  N  T  R  S  *  A  I  L  L  Y  N  S  K  L  T  K  C  L  A  Q  I  C  H  *  I  T  *  L  L  V  F  L  P  H  K  I  K  R  Y  T  F  E  F  *  P  W  *  F  K  G  E  G  R  C  C  R  K  M  H  D  L  D  S  R  S  D  L  I  V  R  S  W  V  A  V  M  Y  I  I  V  V  K  N  K  V  H  P  K  T  C  T  P  I  F  </second_frame>
            <third_frame>   T  K  V  S  *  L  L  N  I  H  L  Y  L  S  L  S  F  L  L  F  Y  S  L  F  T  L  F  I  S  L  F  S  S  P  P  P  D  S  L  N  *  S  T  N  Q  T  S  *  S  T  S  S  E  L  F  I  F  Q  L  N  Q  *  E  F  L  G  F  L  V  C  G  V  H  F  S  L  V  L  N  T  R  A  C  C  R  F  V  S  G  L  W  V  Y  E  F  S  G  S  W  S  *  S  L  E  L  F  L  L  L  Q  M  L  G  E  L  L  L  S  V  S  N  L  V  V  K  *  M  C  Y  *  F  I  L  E  V  I  I  G  G  E  Y  L  G  S  G  K  W  D  L  L  M  G  F  T  P  E  K  K  S  S  I  W  R  R  N  G  *  L  I  R  S  F  C  S  L  V  L  R  L  E  R  V  L  M  P  K  C  M  R  E   : N  T  E  T  R  M  *  Q  *  R  L  C  I  K  G  R  H  L  R  R  L  P  R  G  N  L  V  L  E  G  R  L  L  C  Y  P  E  F  S  T  R  T  *  *  S :   S  *  E  L  A  R  S  L  S  W  S  *  *  L  N  F  F  S  G  G  R  *  G  N  T  C  *  T  *  G  Q  G  A  W  I  L  V  S  L  L  D  L  P  L  I  *  P  V  Q  W  S  A  C  T  L  M  V  S  F  I  A  T  *  N  L  :  R  T  C  F  *  L  R  T  T  K  L  S  N  L  R  I  L  V  W  Q  E  K  N  H  *  Q  R  *  *  L  L  K  L  E  P  I  A  G  W  L  Q  S :   S  T  A  R  S  L  *  D  T  A  R  R  S  I  I  I  I  K  *  M  P  T  V  L  R  S  F  C  G  N  S  Y  I  T  N  Y  H  L  R  A  C  L  I  Y  R  L  L  M  Q  L  L  L  R :   M  *  D  Q  V  Q  M  I  S  P  R  I  W  Q  *  L  *  L  R  V  G  K  R  I  Q  T  L  V  P  T  S  L  R  *  Y  R  C  F  F  I  F  S  L  Q  F  P  L  R  N  Q  *  Y  Q  L  G  F  S  L  Q  R  I  M  Y  Y  H  R  S  L  Q  V  P  A  R  *  C  P  S  V  M  T  R  L  R  P  L  K  H  P  W  R  I  S  Q  E  V  S  S  S  V  L  T  N  A  T  D  P  Q  G  K  S  L  L  I  L  *  K  I  L  G  V  E  L  S  Y  Y  T  I  V  S  S  Q  N  V  *  P  R  Y  V  T  R  *  L  S  F  W  S  F  F  H  I  R  *  K  G  T  L  L  S  F  S  H  G  N  S  K  V  K  D  V  V  A  G  R  C  M  I  *  T  R  V  L  T  *  L  *  G  V  G  L  L  *  C  I  L  *  L  *  K  I  R  S  I  Q  R  P  V  L  L  Y  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32650" stop="32481"/>
                    <exon start="31966" stop="31834"/>
                    <exon start="31718" stop="31523"/>
                    <exon start="30467" stop="30343"/>
                    <exon start="30241" stop="30083"/>
                    <exon start="29580" stop="29266"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1095</number_coding_nucleotides>
                  <number_encoded_amino_acids>365</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SYYRGRVFGVWKMGSANGFYSGEEEFNLEAKWLIDPKLLFVGPKIGEGAHAKVYEGKYRNQNVAIKIVHKGETPEEIAKRESRFGREVAMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNLRPRCLDTGVAIRFALDIARAMECLHSHGIIHRDLKPENLLLTADHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRHGEKKHYNHKVDAYSFAIVLWELVHNKLPFEGMSNLQAAYAAAFKNVRPSADDLPEDLAVIVTSCWKEDPNTRPNFTQIIQMLLHFLSSVSPPEPVIPARIFTSENHVLPPESPGTSSLMSKRDDSVETPKTPMENQPRGFFFCFNQCY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="37301" PGL_stop="38694"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="37301" e_stop="37595"/>
            <exon e_start="37671" e_stop="37760"/>
            <exon e_start="37837" e_stop="37901"/>
            <exon e_start="38072" e_stop="38115"/>
            <exon e_start="38431" e_stop="38694"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.899" acc_prob="0.839" e_score="1.000"/>
          <exon-only e_score="0.973"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37301" e_stop="37595" e_length="295"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.967">
            <gDNA_intron_boundary i_start="37596" i_stop="37670" i_length="75"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="37671" e_stop="37760" e_length="90"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.984">
            <gDNA_intron_boundary i_start="37761" i_stop="37836" i_length="76"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="37837" e_stop="37901" e_length="65"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="37902" i_stop="38071" i_length="170"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="38072" e_stop="38115" e_length="44"/>
          </exon>
          <intron i_serial="4" don_prob="0.899" acc_prob="0.839">
            <gDNA_intron_boundary i_start="38116" i_stop="38430" i_length="315"/>
          </intron>
          <exon e_serial="5" e_score="0.973">
            <gDNA_exon_boundary e_start="38431" e_stop="38694" e_length="264"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37301" stop="37595"/>
              <exon start="37671" stop="37760"/>
              <exon start="37837" stop="37901"/>
              <exon start="38072" stop="38115"/>
              <exon start="38431" stop="38694"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599584" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGCTCCGTCGATTTTGCCGCCGGGATGTATTCAACCGCCCGCCGTACTACCCTAGTTGACTATAATCAACGTCATTCGCCGTCGACGATCTCCAAATCGTCGTTGCAACTAATTCACTTGCGTAGAATTGTTTCTATTTCTCTTTTCGCTAAAAATAATCACCTTCCCAATAGATGCCGGCGAATGCGTACCATATCCGGCAGACATTTATCTTCTCATTCATCGGATTCTTCAAGCGACTATGAAAACCCGTTAAGTTGTGATTCAACTCACATTGACTCTGTACTGCGGCCAG : GTAATCTGCTGTCCAAAAGTGTTACATGGATTGGTGTTGCCACTATTACTAGCAAAGTTCTGGTGATTATTTCCTAATATGTTTTTAAAT : GGGTTATTGAGGGAAATTGTTATAGCTTCAGCTTTTGGCATTGGTCCTGTAGTAACTGCCTTCAG : GTATGCTTCGGTGCTGCCTGGTTTTGCTGCATCAGTTCTTGGTG : GTGTTAATGGCCCTATTCACATCACAATGACAACTACATTAAGGCTAGTTGCTATCTCTGTATGCTACTATCTTGAATCCTAAAGATGAATTCAGAGTGTTCTGCACTTTAACTGCTACAGAATTATTTTTACCAGGAGCCAAAGGCACCATATTCCTGTTGTCGCCATATTCATCTAAAGAAGCTTGCGATACTTGAATTTATGTGTCTCTACATGTGATAACCCAGGATTCTTTGTGCACAGTACCATAACATGACAAATTA</gDNA_template>
            <first_frame> G  S  V  D  F  A  A  G  M  Y  S  T  A  R  R  T  T  L  V  D  Y  N  Q  R  H  S  P  S  T  I  S  K  S  S  L  Q  L  I  H  L  R  R  I  V  S  I  S  L  F  A  K  N  N  H  L  P  N  R  C  R  R  M  R  T  I  S  G  R  H  L  S  S  H  S  S  D  S  S  S  D  Y  E  N  P  L  S  C  D  S  T  H  I  D  S  V  L  R  P   : G  N  L  L  S  K  S  V  T  W  I  G  V  A  T  I  T  S  K  V  L  V  I  I  S  *  Y  V  F  K   : W  V  I  E  G  N  C  Y  S  F  S  F  W  H  W  S  C  S  N  C  L  Q  :  V  C  F  G  A  A  W  F  C  C  I  S  S  W  W :   C  *  W  P  Y  S  H  H  N  D  N  Y  I  K  A  S  C  Y  L  C  M  L  L  S  *  I  L  K  M  N  S  E  C  S  A  L  *  L  L  Q  N  Y  F  Y  Q  E  P  K  A  P  Y  S  C  C  R  H  I  H  L  K  K  L  A  I  L  E  F  M  C  L  Y  M  *  *  P  R  I  L  C  A  Q  Y  H  N  M  T  N   </first_frame>
            <second_frame>  A  P  S  I  L  P  P  G  C  I  Q  P  P  A  V  L  P  *  L  T  I  I  N  V  I  R  R  R  R  S  P  N  R  R  C  N  *  F  T  C  V  E  L  F  L  F  L  F  S  L  K  I  I  T  F  P  I  D  A  G  E  C  V  P  Y  P  A  D  I  Y  L  L  I  H  R  I  L  Q  A  T  M  K  T  R  *  V  V  I  Q  L  T  L  T  L  Y  C  G  Q  :  V  I  C  C  P  K  V  L  H  G  L  V  L  P  L  L  L  A  K  F  W  *  L  F  P  N  M  F  L  N  :  G  L  L  R  E  I  V  I  A  S  A  F  G  I  G  P  V  V  T  A  F  R :   Y  A  S  V  L  P  G  F  A  A  S  V  L  G   : G  V  N  G  P  I  H  I  T  M  T  T  T  L  R  L  V  A  I  S  V  C  Y  Y  L  E  S  *  R  *  I  Q  S  V  L  H  F  N  C  Y  R  I  I  F  T  R  S  Q  R  H  H  I  P  V  V  A  I  F  I  *  R  S  L  R  Y  L  N  L  C  V  S  T  C  D  N  P  G  F  F  V  H  S  T  I  T  *  Q  I  </second_frame>
            <third_frame>   L  R  R  F  C  R  R  D  V  F  N  R  P  P  Y  Y  P  S  *  L  *  S  T  S  F  A  V  D  D  L  Q  I  V  V  A  T  N  S  L  A  *  N  C  F  Y  F  S  F  R  *  K  *  S  P  S  Q  *  M  P  A  N  A  Y  H  I  R  Q  T  F  I  F  S  F  I  G  F  F  K  R  L  *  K  P  V  K  L  *  F  N  S  H  *  L  C  T  A  A  R :   *  S  A  V  Q  K  C  Y  M  D  W  C  C  H  Y  Y  *  Q  S  S  G  D  Y  F  L  I  C  F  *  M :   G  Y  *  G  K  L  L  *  L  Q  L  L  A  L  V  L  *  *  L  P  S   : G  M  L  R  C  C  L  V  L  L  H  Q  F  L  V  :  V  L  M  A  L  F  T  S  Q  *  Q  L  H  *  G  *  L  L  S  L  Y  A  T  I  L  N  P  K  D  E  F  R  V  F  C  T  L  T  A  T  E  L  F  L  P  G  A  K  G  T  I  F  L  L  S  P  Y  S  S  K  E  A  C  D  T  *  I  Y  V  S  L  H  V  I  T  Q  D  S  L  C  T  V  P  *  H  D  K  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37301" stop="37595"/>
                    <exon start="37671" stop="37747"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>369</number_coding_nucleotides>
                  <number_encoded_amino_acids>123</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSVDFAAGMYSTARRTTLVDYNQRHSPSTISKSSLQLIHLRRIVSISLFAKNNHLPNRCRRMRTISGRHLSSHSSDSSSDYENPLSCDSTHIDSVLRPGNLLSKSVTWIGVATITSKVLVIIS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37737" stop="37760"/>
                    <exon start="37837" stop="37901"/>
                    <exon start="38072" stop="38115"/>
                    <exon start="38431" stop="38513"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LFPNMFLNGLLREIVIASAFGIGPVVTAFRYASVLPGFAASVLGGVNGPIHITMTTTLRLVAISVCYYLES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="46775" PGL_stop="43844"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46775" e_stop="46516"/>
            <exon e_start="46430" e_stop="46369"/>
            <exon e_start="46275" e_stop="46224"/>
            <exon e_start="45196" e_stop="45082"/>
            <exon e_start="44990" e_stop="44896"/>
            <exon e_start="44771" e_stop="44665"/>
            <exon e_start="44576" e_stop="44462"/>
            <exon e_start="44386" e_stop="44342"/>
            <exon e_start="44256" e_stop="43844"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.845" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.388" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.692" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="0.893" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.867" acc_prob="0.821" e_score="1.000"/>
          <exon-intron don_prob="0.032" acc_prob="0.990" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="46775" e_stop="46516" e_length="260"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.972">
            <gDNA_intron_boundary i_start="46515" i_stop="46431" i_length="85"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="46430" e_stop="46369" e_length="62"/>
          </exon>
          <intron i_serial="2" don_prob="0.845" acc_prob="0.994">
            <gDNA_intron_boundary i_start="46368" i_stop="46276" i_length="93"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="46275" e_stop="46224" e_length="52"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.000">
            <gDNA_intron_boundary i_start="46223" i_stop="45197" i_length="1027"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="45196" e_stop="45082" e_length="115"/>
          </exon>
          <intron i_serial="4" don_prob="0.388" acc_prob="1.000">
            <gDNA_intron_boundary i_start="45081" i_stop="44991" i_length="91"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="44990" e_stop="44896" e_length="95"/>
          </exon>
          <intron i_serial="5" don_prob="0.692" acc_prob="0.958">
            <gDNA_intron_boundary i_start="44895" i_stop="44772" i_length="124"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="44771" e_stop="44665" e_length="107"/>
          </exon>
          <intron i_serial="6" don_prob="0.893" acc_prob="0.989">
            <gDNA_intron_boundary i_start="44664" i_stop="44577" i_length="88"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="44576" e_stop="44462" e_length="115"/>
          </exon>
          <intron i_serial="7" don_prob="0.867" acc_prob="0.821">
            <gDNA_intron_boundary i_start="44461" i_stop="44387" i_length="75"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="44386" e_stop="44342" e_length="45"/>
          </exon>
          <intron i_serial="8" don_prob="0.032" acc_prob="0.990">
            <gDNA_intron_boundary i_start="44341" i_stop="44257" i_length="85"/>
          </intron>
          <exon e_serial="9" e_score="0.998">
            <gDNA_exon_boundary e_start="44256" e_stop="43844" e_length="413"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46775" stop="46516"/>
              <exon start="46430" stop="46369"/>
              <exon start="46275" stop="46224"/>
              <exon start="45196" stop="45082"/>
              <exon start="44990" stop="44896"/>
              <exon start="44771" stop="44665"/>
              <exon start="44576" stop="44465"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574924" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44529" stop="44462"/>
              <exon start="44386" stop="44342"/>
              <exon start="44256" stop="43844"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574923" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAGTTCGATGTTCCGTTCCCGTTAGGAACTATCCCTAAACTCAACAGTAATAGCAATAGCAGTAGAAGCAGAAGAGAGAATCATCAGAGAAGAAGATGAAAGAAGCAAAGCGTAGTCGTAAACGGAAGAGAGGAAAGGTTCATAAGAAATCTTCCACTCCGGCCGGAAACGATCCTTCTAAGGTCTCCGGCGTGAATCAGTCTATGGTTTCGAATACGGCGATCTCAAAGACTAAGAAACCTTCGTCTTTTCTCGATAAG : ATGAAGGCGAGATTATCAGGAGGACACTTCCGTATGCTTAATGAAAAACTCTACACTTGCTC : AGGAGATGAGGCGCTTAATTATTTCAAGGAAAATCCGGAACTTTTTAATGTG : TATCATGCAGGGTATCAGGAGCAAATGTTACATTGGCCAGAAAAACCTGTTAATATAATCACAAAATGGCTAAAGGATCATAGCCCTTCATTAATTGTTGCAGACTTTGGCTGCG : GAGATGCTCGGCTGGCAAGAAGTGTGAAGAACAAAGTGTGGTCTTTGGATCTTGTCGCACATGATCCTTCAGTAATTGCTTGTGACATGTCAAAT : ACCCCTCTAGAGTCCTCGTCAGTTGATGTGGCCATCTTTTGCCTTTCATTGATGGGAACCGATTATCCAAGCTTTCTTCAGGAAGCGCGCAGAGTTCTTAAACCCAG : GGGGTGGCTTTTGATAGCAGAAGTTAAAAGCAGGCTTGATCCAACTACAGGGGGTGCAGACCCAAGCAATTTTTTGAAAGCTATTTGTGATCTTGGGTTTACTATTGAGTCAAAG : GATTTCTCTAACAAAATGTTTGTGTTGTTCTACTTAAAGAAAAAG : GAAAAACAGAATTCAGTAGACAAAGAGATTAATTGGCCTGAGCTCAAGGCATGTATTTATAAACGGCGCTGAGCTTGGCCATAATATGGTCTAAGATTTTACTATAGTCCCTGTTCATTCTGGAGATGGGTTTAAACTTGTTGCTAGATCTCACTCATTGTTTCAAACCGTGCTCCCAAAAAAGACTGTCCACTGAAGTGAGGAATGGACGCTGTTGTGTTTCAAAGAATGCGCTTCACAATGATTCTAGGAGAAAAGTAGTCTATTCTTTGAATCTCATCTTTGAGAAGTAGGATTAGTATCGGCATTATTGTAGTATATTGGATTTTTGAAATTGTAGTTATTTTAATTGTTTGAAAATTATAATAACTAAATTAATATGATACTGATGTATTTATTTGATGAGATTCAAT</gDNA_template>
            <first_frame> E  F  D  V  P  F  P  L  G  T  I  P  K  L  N  S  N  S  N  S  S  R  S  R  R  E  N  H  Q  R  R  R  *  K  K  Q  S  V  V  V  N  G  R  E  E  R  F  I  R  N  L  P  L  R  P  E  T  I  L  L  R  S  P  A  *  I  S  L  W  F  R  I  R  R  S  Q  R  L  R  N  L  R  L  F  S  I  R :   *  R  R  D  Y  Q  E  D  T  S  V  C  L  M  K  N  S  T  L  A   : Q  E  M  R  R  L  I  I  S  R  K  I  R  N  F  L  M  C :   I  M  Q  G  I  R  S  K  C  Y  I  G  Q  K  N  L  L  I  *  S  Q  N  G  *  R  I  I  A  L  H  *  L  L  Q  T  L  A  A  :  E  M  L  G  W  Q  E  V  *  R  T  K  C  G  L  W  I  L  S  H  M  I  L  Q  *  L  L  V  T  C  Q  I :   P  L  *  S  P  R  Q  L  M  W  P  S  F  A  F  H  *  W  E  P  I  I  Q  A  F  F  R  K  R  A  E  F  L  N  P   : G  G  G  F  *  *  Q  K  L  K  A  G  L  I  Q  L  Q  G  V  Q  T  Q  A  I  F  *  K  L  F  V  I  L  G  L  L  L  S  Q  R :   I  S  L  T  K  C  L  C  C  S  T  *  R  K  R :   K  N  R  I  Q  *  T  K  R  L  I  G  L  S  S  R  H  V  F  I  N  G  A  E  L  G  H  N  M  V  *  D  F  T  I  V  P  V  H  S  G  D  G  F  K  L  V  A  R  S  H  S  L  F  Q  T  V  L  P  K  K  T  V  H  *  S  E  E  W  T  L  L  C  F  K  E  C  A  S  Q  *  F  *  E  K  S  S  L  F  F  E  S  H  L  *  E  V  G  L  V  S  A  L  L  *  Y  I  G  F  L  K  L  *  L  F  *  L  F  E  N  Y  N  N  *  I  N  M  I  L  M  Y  L  F  D  E  I  Q  </first_frame>
            <second_frame>  S  S  M  F  R  S  R  *  E  L  S  L  N  S  T  V  I  A  I  A  V  E  A  E  E  R  I  I  R  E  E  D  E  R  S  K  A  *  S  *  T  E  E  R  K  G  S  *  E  I  F  H  S  G  R  K  R  S  F  *  G  L  R  R  E  S  V  Y  G  F  E  Y  G  D  L  K  D  *  E  T  F  V  F  S  R  *   : D  E  G  E  I  I  R  R  T  L  P  Y  A  *  *  K  T  L  H  L  L  :  R  R  *  G  A  *  L  F  Q  G  K  S  G  T  F  *  C   : V  S  C  R  V  S  G  A  N  V  T  L  A  R  K  T  C  *  Y  N  H  K  M  A  K  G  S  *  P  F  I  N  C  C  R  L  W  L  R :   R  C  S  A  G  K  K  C  E  E  Q  S  V  V  F  G  S  C  R  T  *  S  F  S  N  C  L  *  H  V  K   : Y  P  S  R  V  L  V  S  *  C  G  H  L  L  P  F  I  D  G  N  R  L  S  K  L  S  S  G  S  A  Q  S  S  *  T  Q  :  G  V  A  F  D  S  R  S  *  K  Q  A  *  S  N  Y  R  G  C  R  P  K  Q  F  F  E  S  Y  L  *  S  W  V  Y  Y  *  V  K   : G  F  L  *  Q  N  V  C  V  V  L  L  K  E  K   : G  K  T  E  F  S  R  Q  R  D  *  L  A  *  A  Q  G  M  Y  L  *  T  A  L  S  L  A  I  I  W  S  K  I  L  L  *  S  L  F  I  L  E  M  G  L  N  L  L  L  D  L  T  H  C  F  K  P  C  S  Q  K  R  L  S  T  E  V  R  N  G  R  C  C  V  S  K  N  A  L  H  N  D  S  R  R  K  V  V  Y  S  L  N  L  I  F  E  K  *  D  *  Y  R  H  Y  C  S  I  L  D  F  *  N  C  S  Y  F  N  C  L  K  I  I  I  T  K  L  I  *  Y  *  C  I  Y  L  M  R  F  N </second_frame>
            <third_frame>   V  R  C  S  V  P  V  R  N  Y  P  *  T  Q  Q  *  *  Q  *  Q  *  K  Q  K  R  E  S  S  E  K  K  M  K  E  A  K  R  S  R  K  R  K  R  G  K  V  H  K  K  S  S  T  P  A  G  N  D  P  S  K  V  S  G  V  N  Q  S  M  V  S  N  T  A  I  S  K  T  K  K  P  S  S  F  L  D  K  :  M  K  A  R  L  S  G  G  H  F  R  M  L  N  E  K  L  Y  T  C  S :   G  D  E  A  L  N  Y  F  K  E  N  P  E  L  F  N  V  :  Y  H  A  G  Y  Q  E  Q  M  L  H  W  P  E  K  P  V  N  I  I  T  K  W  L  K  D  H  S  P  S  L  I  V  A  D  F  G  C   : G  D  A  R  L  A  R  S  V  K  N  K  V  W  S  L  D  L  V  A  H  D  P  S  V  I  A  C  D  M  S  N  :  T  P  L  E  S  S  S  V  D  V  A  I  F  C  L  S  L  M  G  T  D  Y  P  S  F  L  Q  E  A  R  R  V  L  K  P  R :   G  W  L  L  I  A  E  V  K  S  R  L  D  P  T  T  G  G  A  D  P  S  N  F  L  K  A  I  C  D  L  G  F  T  I  E  S  K  :  D  F  S  N  K  M  F  V  L  F  Y  L  K  K  K  :  E  K  Q  N  S  V  D  K  E  I  N  W  P  E  L  K  A  C  I  Y  K  R  R  *  A  W  P  *  Y  G  L  R  F  Y  Y  S  P  C  S  F  W  R  W  V  *  T  C  C  *  I  S  L  I  V  S  N  R  A  P  K  K  D  C  P  L  K  *  G  M  D  A  V  V  F  Q  R  M  R  F  T  M  I  L  G  E  K  *  S  I  L  *  I  S  S  L  R  S  R  I  S  I  G  I  I  V  V  Y  W  I  F  E  I  V  V  I  L  I  V  *  K  L  *  *  L  N  *  Y  D  T  D  V  F  I  *  *  D  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46710" stop="46516"/>
                    <exon start="46430" stop="46369"/>
                    <exon start="46275" stop="46224"/>
                    <exon start="45196" stop="45082"/>
                    <exon start="44990" stop="44896"/>
                    <exon start="44771" stop="44665"/>
                    <exon start="44576" stop="44462"/>
                    <exon start="44386" stop="44342"/>
                    <exon start="44256" stop="44185"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>855</number_coding_nucleotides>
                  <number_encoded_amino_acids>285</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KQKRESSEKKMKEAKRSRKRKRGKVHKKSSTPAGNDPSKVSGVNQSMVSNTAISKTKKPSSFLDKMKARLSGGHFRMLNEKLYTCSGDEALNYFKENPELFNVYHAGYQEQMLHWPEKPVNIITKWLKDHSPSLIVADFGCGDARLARSVKNKVWSLDLVAHDPSVIACDMSNTPLESSSVDVAIFCLSLMGTDYPSFLQEARRVLKPRGWLLIAEVKSRLDPTTGGADPSNFLKAICDLGFTIESKDFSNKMFVLFYLKKKEKQNSVDKEINWPELKACIYKRR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="47947" PGL_stop="48350"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="47947" e_stop="48350"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.936"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.936">
            <gDNA_exon_boundary e_start="47947" e_stop="48350" e_length="404"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47947" stop="48350"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567070" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTATAACACGTTATCAGCACGAGTCTCTAGCCAATTAAGATTGAGTTTTAGTTTTTCTTTAACTCATGTTTTGGTTGATCTTGTTATGAGAATCAAGGTATTATTATATGCATAAAATCAGGTATGTATTTTCTAGAATATTTTTATGATTTAGAATAAAAATAGTATTCAGTCACTAACAATTATCACGAACCGAAGACATATACTATTATTGGTTGAATATGACATGCTATATAAAACTTCTTAAATTGAAGAAGTGTAAAATTTTAATAGCATGAGTTTGAATGTTATTTTGATTATTTTGAAAGACTCAAAGGGTGAGTCATGTTGTACTTCGGTCTATTATACCGTTGGTTAAGGGTAAGACGATGGATTCAAGTTTCATCGCACCAAAAGGGTAAG</gDNA_template>
            <first_frame> F  Y  N  T  L  S  A  R  V  S  S  Q  L  R  L  S  F  S  F  S  L  T  H  V  L  V  D  L  V  M  R  I  K  V  L  L  Y  A  *  N  Q  V  C  I  F  *  N  I  F  M  I  *  N  K  N  S  I  Q  S  L  T  I  I  T  N  R  R  H  I  L  L  L  V  E  Y  D  M  L  Y  K  T  S  *  I  E  E  V  *  N  F  N  S  M  S  L  N  V  I  L  I  I  L  K  D  S  K  G  E  S  C  C  T  S  V  Y  Y  T  V  G  *  G  *  D  D  G  F  K  F  H  R  T  K  R  V   </first_frame>
            <second_frame>  F  I  T  R  Y  Q  H  E  S  L  A  N  *  D  *  V  L  V  F  L  *  L  M  F  W  L  I  L  L  *  E  S  R  Y  Y  Y  M  H  K  I  R  Y  V  F  S  R  I  F  L  *  F  R  I  K  I  V  F  S  H  *  Q  L  S  R  T  E  D  I  Y  Y  Y  W  L  N  M  T  C  Y  I  K  L  L  K  L  K  K  C  K  I  L  I  A  *  V  *  M  L  F  *  L  F  *  K  T  Q  R  V  S  H  V  V  L  R  S  I  I  P  L  V  K  G  K  T  M  D  S  S  F  I  A  P  K  G  *  </second_frame>
            <third_frame>   L  *  H  V  I  S  T  S  L  *  P  I  K  I  E  F  *  F  F  F  N  S  C  F  G  *  S  C  Y  E  N  Q  G  I  I  I  C  I  K  S  G  M  Y  F  L  E  Y  F  Y  D  L  E  *  K  *  Y  S  V  T  N  N  Y  H  E  P  K  T  Y  T  I  I  G  *  I  *  H  A  I  *  N  F  L  N  *  R  S  V  K  F  *  *  H  E  F  E  C  Y  F  D  Y  F  E  R  L  K  G  *  V  M  L  Y  F  G  L  L  Y  R  W  L  R  V  R  R  W  I  Q  V  S  S  H  Q  K  G  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0064B17.3"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="50641" PGL_stop="51874"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="50641" e_stop="51874"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.935"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.935">
            <gDNA_exon_boundary e_start="50641" e_stop="51874" e_length="1234"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50641" stop="51874"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586538" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAGAGCCTATGATACGCCGGAAGCGTAATAGACAAATTGATTCCAAATATAAAATTCCTTGAAGAAGGAAAGAGCAAATGATCAATATGTTCATGATAATGAGGCAAGTGCTATAAAGGAGCACATTGACATAACACTTCATAAAATCTTGAAAAAGGTTCAGGTACCTGAAATAATGAAAAATGAAGAGATCTCGATAAGTTATGTCTTGTTGGAATCGATATCAAATAACCGCCGACGGTATCTTTGATATGAGGTAGCGCTCAATGATATAAATTATGATGAGGATCTTGAATTCAAATTTGTCATATAGTGTGAAGAGATAAATGGTTGGCCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCGATAATATAACCGTAAAATATCAAATACGGTTTGTGCCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGATATTAGTGGAGATGTTTTCTCCTTTGGTGGATGAAATGAGGTTTGTTTTGATCTGGCAACATATGAAAAACTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGAGAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATATAAGAGCTTGAAAGAAACTTTTTCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATGGTCAAGGAAGAAAAAGGGTACAAAAGAATGACCCTAATTGTCCTTGTATTTTTATGAAAAGGTTTTGGTAAGACAAAATTTTGTCTTGACCAACAGATTGATAATTTGACAAATGAAATATTTGTTTAACAGTGCACATACACTGAAAAGTTTTGATGCAATTTAATATGGATAAATCACATTCATTGAGTACCCCAATGATTATGAGATCACTTGACATAAATGATGATTCAGTTTGATCTCAAAAGAAGGATGAAGAGTTTCTTGGTGATGAAACTCTATCTTGGTGCAATCAGGGCACTAGTGCATCTTACTAACAATATTATTCCAGATATTTGTTTTGCAGTAAATTTACTGGCAAGATTCAGTTTCTCCCCGATAAAAGGACATTGAAATGGTGTTGAGCACATGATTGAATATCCTCAAAGGACCATAGTTATGGGTTTATTCTATTCCGAGGAATCCAACACAAAATTGATTGGTTACGCAAATG</gDNA_template>
            <first_frame> Q  S  L  *  Y  A  G  S  V  I  D  K  L  I  P  N  I  K  F  L  E  E  G  K  S  K  *  S  I  C  S  *  *  *  G  K  C  Y  K  G  A  H  *  H  N  T  S  *  N  L  E  K  G  S  G  T  *  N  N  E  K  *  R  D  L  D  K  L  C  L  V  G  I  D  I  K  *  P  P  T  V  S  L  I  *  G  S  A  Q  *  Y  K  L  *  *  G  S  *  I  Q  I  C  H  I  V  *  R  D  K  W  L  A  K  *  N  A  Q  F  K  Y  I  L  F  H  L  E  K  *  H  F  G  L  V  V  H  K  S  R  Y  N  V  S  G  V  Q  I  N  Y  Y  A  I  I  *  P  *  N  I  K  Y  G  L  C  L  G  A  *  R  F  I  A  K  I  L  I  L  V  E  M  F  S  P  L  V  D  E  M  R  F  V  L  I  W  Q  H  M  K  N  L  N  A  C  N  E  *  L  *  C  L  A  R  E  *  R  L  Y  E  N  P  *  N  N  R  G  V  *  S  I  *  E  L  E  R  N  F  F  N  K  A  S  R  I  L  I  W  I  E  M  V  K  E  E  K  G  Y  K  R  M  T  L  I  V  L  V  F  L  *  K  G  F  G  K  T  K  F  C  L  D  Q  Q  I  D  N  L  T  N  E  I  F  V  *  Q  C  T  Y  T  E  K  F  *  C  N  L  I  W  I  N  H  I  H  *  V  P  Q  *  L  *  D  H  L  T  *  M  M  I  Q  F  D  L  K  R  R  M  K  S  F  L  V  M  K  L  Y  L  G  A  I  R  A  L  V  H  L  T  N  N  I  I  P  D  I  C  F  A  V  N  L  L  A  R  F  S  F  S  P  I  K  G  H  *  N  G  V  E  H  M  I  E  Y  P  Q  R  T  I  V  M  G  L  F  Y  S  E  E  S  N  T  K  L  I  G  Y  A  N  </first_frame>
            <second_frame>  R  A  Y  D  T  P  E  A  *  *  T  N  *  F  Q  I  *  N  S  L  K  K  E  R  A  N  D  Q  Y  V  H  D  N  E  A  S  A  I  K  E  H  I  D  I  T  L  H  K  I  L  K  K  V  Q  V  P  E  I  M  K  N  E  E  I  S  I  S  Y  V  L  L  E  S  I  S  N  N  R  R  R  Y  L  *  Y  E  V  A  L  N  D  I  N  Y  D  E  D  L  E  F  K  F  V  I  *  C  E  E  I  N  G  W  P  S  K  M  H  N  S  S  I  F  C  F  T  *  K  S  D  I  L  D  W  *  S  I  N  Q  G  I  M  S  V  G  Y  K  *  I  I  M  R  *  Y  N  R  K  I  S  N  T  V  C  A  L  G  H  K  G  L  S  Q  K  S  *  Y  *  W  R  C  F  L  L  W  W  M  K  *  G  L  F  *  S  G  N  I  *  K  T  *  M  H  V  M  N  N  C  N  V  *  L  E  N  E  G  Y  M  K  I  L  E  T  I  E  V  S  E  A  Y  K  S  L  K  E  T  F  S  I  K  L  Q  E  S  L  Y  G  L  K  W  S  R  K  K  K  G  T  K  E  *  P  *  L  S  L  Y  F  Y  E  K  V  L  V  R  Q  N  F  V  L  T  N  R  L  I  I  *  Q  M  K  Y  L  F  N  S  A  H  T  L  K  S  F  D  A  I  *  Y  G  *  I  T  F  I  E  Y  P  N  D  Y  E  I  T  *  H  K  *  *  F  S  L  I  S  K  E  G  *  R  V  S  W  *  *  N  S  I  L  V  Q  S  G  H  *  C  I  L  L  T  I  L  F  Q  I  F  V  L  Q  *  I  Y  W  Q  D  S  V  S  P  R  *  K  D  I  E  M  V  L  S  T  *  L  N  I  L  K  G  P  *  L  W  V  Y  S  I  P  R  N  P  T  Q  N  *  L  V  T  Q  M </second_frame>
            <third_frame>   E  P  M  I  R  R  K  R  N  R  Q  I  D  S  K  Y  K  I  P  *  R  R  K  E  Q  M  I  N  M  F  M  I  M  R  Q  V  L  *  R  S  T  L  T  *  H  F  I  K  S  *  K  R  F  R  Y  L  K  *  *  K  M  K  R  S  R  *  V  M  S  C  W  N  R  Y  Q  I  T  A  D  G  I  F  D  M  R  *  R  S  M  I  *  I  M  M  R  I  L  N  S  N  L  S  Y  S  V  K  R  *  M  V  G  Q  V  K  C  T  I  Q  V  Y  F  V  S  L  R  K  V  T  F  W  T  G  S  P  *  I  K  V  *  C  Q  W  G  T  N  K  L  L  C  D  N  I  T  V  K  Y  Q  I  R  F  V  P  W  G  I  K  V  Y  R  K  N  P  D  I  S  G  D  V  F  S  F  G  G  *  N  E  V  C  F  D  L  A  T  Y  E  K  L  E  C  M  *  *  I  I  V  M  S  S  *  R  M  K  V  I  *  K  S  L  K  Q  S  R  C  L  K  H  I  R  A  *  K  K  L  F  Q  *  S  F  K  N  P  Y  M  D  *  N  G  Q  G  R  K  R  V  Q  K  N  D  P  N  C  P  C  I  F  M  K  R  F  W  *  D  K  I  L  S  *  P  T  D  *  *  F  D  K  *  N  I  C  L  T  V  H  I  H  *  K  V  L  M  Q  F  N  M  D  K  S  H  S  L  S  T  P  M  I  M  R  S  L  D  I  N  D  D  S  V  *  S  Q  K  K  D  E  E  F  L  G  D  E  T  L  S  W  C  N  Q  G  T  S  A  S  Y  *  Q  Y  Y  S  R  Y  L  F  C  S  K  F  T  G  K  I  Q  F  L  P  D  K  R  T  L  K  W  C  *  A  H  D  *  I  S  S  K  D  H  S  Y  G  F  I  L  F  R  G  I  Q  H  K  I  D  W  L  R  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50693" stop="50890"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSLKKERANDQYVHDNEASAIKEHIDITLHKILKKVQVPEIMKNEEISISYVLLESISNNRRRYL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="61822" PGL_stop="55478"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61822" e_stop="61411"/>
            <exon e_start="61176" e_stop="61091"/>
            <exon e_start="60754" e_stop="60449"/>
            <exon e_start="59967" e_stop="59884"/>
            <exon e_start="56123" e_stop="55478"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.915" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.803" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="61822" e_stop="61411" e_length="412"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.969">
            <gDNA_intron_boundary i_start="61410" i_stop="61177" i_length="234"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="61176" e_stop="61091" e_length="86"/>
          </exon>
          <intron i_serial="2" don_prob="0.915" acc_prob="0.987">
            <gDNA_intron_boundary i_start="61090" i_stop="60755" i_length="336"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="60754" e_stop="60449" e_length="306"/>
          </exon>
          <intron i_serial="3" don_prob="0.803" acc_prob="1.000">
            <gDNA_intron_boundary i_start="60448" i_stop="59968" i_length="481"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="59967" e_stop="59884" e_length="84"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.996">
            <gDNA_intron_boundary i_start="59883" i_stop="56124" i_length="3760"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="56123" e_stop="55478" e_length="646"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61822" stop="61411"/>
              <exon start="61176" stop="61091"/>
              <exon start="60754" stop="60449"/>
              <exon start="59967" stop="59884"/>
              <exon start="56123" stop="55478"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576646" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTATCATTTCTTCGAAGTCAGTGGCGGGTGTGCCTTGTTAGGCTTCCCATGCCTTTAAATCATTCTCTCTCCTCTTCAATCACATTTTGCTTGCACTTCTCTCCAAAACCTTTCACTCGCTTTTCTGCACGAGCCCTAGTTAACGCCATGGCCGGAACACCGGAGAACTTCTCCACCGACGCTACTGCCGACGCTGCCAACGCCGACGAGGACGTCAAGTTTGGGTTTCAGCGTTCGGAGATGTACCAGAGTAAACTTGCAGGTACTACGACCTCCTATGATCGTCATCTGTTCCTCTGTTACAAGTCTCACGAGACTTGGCCTGCTCGCCTTGAAGCTTCTGACTCCGATCTGCTTCCAAAGTCACTCTCTGCTGCTCTTAAAGCTCGCAAGGATGACATCAAAATCAAG : ACTCTTTTGACAATATGCGAAGTACGTGATGACATGGAAGTATCAGAAGGAGATATTCTGATTTTTCCTGAAATGATCAAATACAG : GGATTTGAAGGAGTCAGATGTGGATGCATTTGTTGATGATGTGCTTGTCAATGGCAATACTTGGAGCTCTGGATTGCAGGAGTCGCTGAGTGGTTCTTATGTGTTTGTCTGTGCCCACAATCTTCGTGATCGAAGATGTGGTGTTTGTGGACCTATTCTAATTGAGGAATTTAGCAAGCTCATTGAGTCCAAGAGCTTGAAAGACAAAGTTCGTGTGACAGCTTGTTCTCATATTGGTGGCCACAAGTATGCTGGTAATGTTATAATCTTCAGCTCAGGAAAGGACGGGAATATTGTTGGCCACTG : GTATGGCTATGTTACGCCAAGTGATGTACCTGCTTTGCTTGATGAGCATATTGGAGAGGGAAAAGTCATTGAACGACTTTGGAG : GGGCCAAATGGGACAATATGAGAAGGTAACTGATAAAGTGGATGAACAGAAGGTTCCTGAAGTAACCAATGAAGAAAAGAAGTCTCTTGAAAATGGAAAAAGCCAGGAGAGTAGTGTAACTAGTTTCAGCTGTTGCCAAGGTGCTGCGGGAGTTTCTTGTTGTAGAGATGCAAGTGCTGAGCAGAAAGAGAACAAGAAAGGGCAGGGAACAGTTTCAAACTGGTTCGGCAAATGGGAGCAGCGTGAAATACTCGCAGCTGTAGGTGTGGTTGGAGCAGTGGCTGTTGTCGCTGTGGCTTATGGCTTTTACAAGAAGTCACGGTGAAGCATGTTAACTTGGGACAAACTTTGTGCTCAAGAGTTTTCGGGTATCTAGGTTTTGTAGAAAGGTAATAATGTTCGAGATAATCTCGGACACTGAAAATGCATACATATTTGGTATATTTAGAGAAAATTAAATGCAATGTGTAATTCGACTATGGAGAGCAGCTCCTTTGCTCGTTCCCAGTAAGAACTAGAAGGGGTGATAAATATAAAGTGCCAACTAAGTGCTACATGTAGAATGATAGTTTTTACTTCTCTTGCTTGGGATTGAGGGTGATTTTATGTGATGTGTTATGGGCAGATTTGCTTTTTTCTTCTTGTG</gDNA_template>
            <first_frame> I  I  I  S  S  K  S  V  A  G  V  P  C  *  A  S  H  A  F  K  S  F  S  L  L  F  N  H  I  L  L  A  L  L  S  K  T  F  H  S  L  F  C  T  S  P  S  *  R  H  G  R  N  T  G  E  L  L  H  R  R  Y  C  R  R  C  Q  R  R  R  G  R  Q  V  W  V  S  A  F  G  D  V  P  E  *  T  C  R  Y  Y  D  L  L  *  S  S  S  V  P  L  L  Q  V  S  R  D  L  A  C  S  P  *  S  F  *  L  R  S  A  S  K  V  T  L  C  C  S  *  S  S  Q  G  *  H  Q  N  Q   : D  S  F  D  N  M  R  S  T  *  *  H  G  S  I  R  R  R  Y  S  D  F  S  *  N  D  Q  I  Q  :  G  F  E  G  V  R  C  G  C  I  C  *  *  C  A  C  Q  W  Q  Y  L  E  L  W  I  A  G  V  A  E  W  F  L  C  V  C  L  C  P  Q  S  S  *  S  K  M  W  C  L  W  T  Y  S  N  *  G  I  *  Q  A  H  *  V  Q  E  L  E  R  Q  S  S  C  D  S  L  F  S  Y  W  W  P  Q  V  C  W  *  C  Y  N  L  Q  L  R  K  G  R  E  Y  C  W  P  L  :  V  W  L  C  Y  A  K  *  C  T  C  F  A  *  *  A  Y  W  R  G  K  S  H  *  T  T  L  E  :  G  P  N  G  T  I  *  E  G  N  *  *  S  G  *  T  E  G  S  *  S  N  Q  *  R  K  E  V  S  *  K  W  K  K  P  G  E  *  C  N  *  F  Q  L  L  P  R  C  C  G  S  F  L  L  *  R  C  K  C  *  A  E  R  E  Q  E  R  A  G  N  S  F  K  L  V  R  Q  M  G  A  A  *  N  T  R  S  C  R  C  G  W  S  S  G  C  C  R  C  G  L  W  L  L  Q  E  V  T  V  K  H  V  N  L  G  Q  T  L  C  S  R  V  F  G  Y  L  G  F  V  E  R  *  *  C  S  R  *  S  R  T  L  K  M  H  T  Y  L  V  Y  L  E  K  I  K  C  N  V  *  F  D  Y  G  E  Q  L  L  C  S  F  P  V  R  T  R  R  G  D  K  Y  K  V  P  T  K  C  Y  M  *  N  D  S  F  Y  F  S  C  L  G  L  R  V  I  L  C  D  V  L  W  A  D  L  L  F  S  S  C  </first_frame>
            <second_frame>  L  S  F  L  R  S  Q  W  R  V  C  L  V  R  L  P  M  P  L  N  H  S  L  S  S  S  I  T  F  C  L  H  F  S  P  K  P  F  T  R  F  S  A  R  A  L  V  N  A  M  A  G  T  P  E  N  F  S  T  D  A  T  A  D  A  A  N  A  D  E  D  V  K  F  G  F  Q  R  S  E  M  Y  Q  S  K  L  A  G  T  T  T  S  Y  D  R  H  L  F  L  C  Y  K  S  H  E  T  W  P  A  R  L  E  A  S  D  S  D  L  L  P  K  S  L  S  A  A  L  K  A  R  K  D  D  I  K  I  K  :  T  L  L  T  I  C  E  V  R  D  D  M  E  V  S  E  G  D  I  L  I  F  P  E  M  I  K  Y  R :   D  L  K  E  S  D  V  D  A  F  V  D  D  V  L  V  N  G  N  T  W  S  S  G  L  Q  E  S  L  S  G  S  Y  V  F  V  C  A  H  N  L  R  D  R  R  C  G  V  C  G  P  I  L  I  E  E  F  S  K  L  I  E  S  K  S  L  K  D  K  V  R  V  T  A  C  S  H  I  G  G  H  K  Y  A  G  N  V  I  I  F  S  S  G  K  D  G  N  I  V  G  H  W :   Y  G  Y  V  T  P  S  D  V  P  A  L  L  D  E  H  I  G  E  G  K  V  I  E  R  L  W  R :   G  Q  M  G  Q  Y  E  K  V  T  D  K  V  D  E  Q  K  V  P  E  V  T  N  E  E  K  K  S  L  E  N  G  K  S  Q  E  S  S  V  T  S  F  S  C  C  Q  G  A  A  G  V  S  C  C  R  D  A  S  A  E  Q  K  E  N  K  K  G  Q  G  T  V  S  N  W  F  G  K  W  E  Q  R  E  I  L  A  A  V  G  V  V  G  A  V  A  V  V  A  V  A  Y  G  F  Y  K  K  S  R  *  S  M  L  T  W  D  K  L  C  A  Q  E  F  S  G  I  *  V  L  *  K  G  N  N  V  R  D  N  L  G  H  *  K  C  I  H  I  W  Y  I  *  R  K  L  N  A  M  C  N  S  T  M  E  S  S  S  F  A  R  S  Q  *  E  L  E  G  V  I  N  I  K  C  Q  L  S  A  T  C  R  M  I  V  F  T  S  L  A  W  D  *  G  *  F  Y  V  M  C  Y  G  Q  I  C  F  F  L  L  V </second_frame>
            <third_frame>   Y  H  F  F  E  V  S  G  G  C  A  L  L  G  F  P  C  L  *  I  I  L  S  P  L  Q  S  H  F  A  C  T  S  L  Q  N  L  S  L  A  F  L  H  E  P  *  L  T  P  W  P  E  H  R  R  T  S  P  P  T  L  L  P  T  L  P  T  P  T  R  T  S  S  L  G  F  S  V  R  R  C  T  R  V  N  L  Q  V  L  R  P  P  M  I  V  I  C  S  S  V  T  S  L  T  R  L  G  L  L  A  L  K  L  L  T  P  I  C  F  Q  S  H  S  L  L  L  L  K  L  A  R  M  T  S  K  S  R :   L  F  *  Q  Y  A  K  Y  V  M  T  W  K  Y  Q  K  E  I  F  *  F  F  L  K  *  S  N  T   : G  I  *  R  S  Q  M  W  M  H  L  L  M  M  C  L  S  M  A  I  L  G  A  L  D  C  R  S  R  *  V  V  L  M  C  L  S  V  P  T  I  F  V  I  E  D  V  V  F  V  D  L  F  *  L  R  N  L  A  S  S  L  S  P  R  A  *  K  T  K  F  V  *  Q  L  V  L  I  L  V  A  T  S  M  L  V  M  L  *  S  S  A  Q  E  R  T  G  I  L  L  A  T   : G  M  A  M  L  R  Q  V  M  Y  L  L  C  L  M  S  I  L  E  R  E  K  S  L  N  D  F  G   : G  A  K  W  D  N  M  R  R  *  L  I  K  W  M  N  R  R  F  L  K  *  P  M  K  K  R  S  L  L  K  M  E  K  A  R  R  V  V  *  L  V  S  A  V  A  K  V  L  R  E  F  L  V  V  E  M  Q  V  L  S  R  K  R  T  R  K  G  R  E  Q  F  Q  T  G  S  A  N  G  S  S  V  K  Y  S  Q  L  *  V  W  L  E  Q  W  L  L  S  L  W  L  M  A  F  T  R  S  H  G  E  A  C  *  L  G  T  N  F  V  L  K  S  F  R  V  S  R  F  C  R  K  V  I  M  F  E  I  I  S  D  T  E  N  A  Y  I  F  G  I  F  R  E  N  *  M  Q  C  V  I  R  L  W  R  A  A  P  L  L  V  P  S  K  N  *  K  G  *  *  I  *  S  A  N  *  V  L  H  V  E  *  *  F  L  L  L  L  L  G  I  E  G  D  F  M  *  C  V  M  G  R  F  A  F  F  F  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61821" stop="61411"/>
                    <exon start="61176" stop="61091"/>
                    <exon start="60754" stop="60449"/>
                    <exon start="59967" stop="59884"/>
                    <exon start="56123" stop="55799"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1209</number_coding_nucleotides>
                  <number_encoded_amino_acids>403</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSFLRSQWRVCLVRLPMPLNHSLSSSITFCLHFSPKPFTRFSARALVNAMAGTPENFSTDATADAANADEDVKFGFQRSEMYQSKLAGTTTSYDRHLFLCYKSHETWPARLEASDSDLLPKSLSAALKARKDDIKIKTLLTICEVRDDMEVSEGDILIFPEMIKYRDLKESDVDAFVDDVLVNGNTWSSGLQESLSGSYVFVCAHNLRDRRCGVCGPILIEEFSKLIESKSLKDKVRVTACSHIGGHKYAGNVIIFSSGKDGNIVGHWYGYVTPSDVPALLDEHIGEGKVIERLWRGQMGQYEKVTDKVDEQKVPEVTNEEKKSLENGKSQESSVTSFSCCQGAAGVSCCRDASAEQKENKKGQGTVSNWFGKWEQREILAAVGVVGAVAVVAVAYGFYKKSR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="61716" e_stop="61131"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="61716" e_stop="61131" e_length="586"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61716" stop="61131"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576645" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAACCTTTCACTCGCTTTTCTGCACGAGCCCTAGTTAACGCCATGGCCGGAACACCGGAGAACTTCTCCACCGACGCTACTGCCGACGCTGCCAACGCCGACGAGGACGTCAAGTTTGGGTTTCAGCGTTCGGAGATGTACCAGAGTAAACTTGCAGGTACTACGACCTCCTATGATCGTCATCTGTTCCTCTGTTACAAGTCTCACGAGACTTGGCCTGCTCGCCTTGAAGCTTCTGACTCCGATCTGCTTCCAAAGTCACTCTCTGCTGCTCTTAAAGCTCGCAAGGATGACATCAAAATCAAGGTTAGGTTTTCTAAAACTGATTGTTTTTGTCAATAGGGGCTAGGAGAAACTTCATTGTTGTGATTACTGCGTCTTTATGTTCTAATGTCTAGAACGACTTAAAGGTAATATGTTGTCACTGGAATAATTTTCTGCTTATGTGATTATTTCTGGAGTGAATCCAACTGATTTGACATTTTGGTTTAGTTTATTGGTCGATATTGATTGATTTTTTCCGATGAGTGTTTGCTGTAGACTCTTTTGACAATATGCGAAGTACGTGATGACATGGAAGTATCAG</gDNA_template>
            <first_frame> K  P  F  T  R  F  S  A  R  A  L  V  N  A  M  A  G  T  P  E  N  F  S  T  D  A  T  A  D  A  A  N  A  D  E  D  V  K  F  G  F  Q  R  S  E  M  Y  Q  S  K  L  A  G  T  T  T  S  Y  D  R  H  L  F  L  C  Y  K  S  H  E  T  W  P  A  R  L  E  A  S  D  S  D  L  L  P  K  S  L  S  A  A  L  K  A  R  K  D  D  I  K  I  K  V  R  F  S  K  T  D  C  F  C  Q  *  G  L  G  E  T  S  L  L  *  L  L  R  L  Y  V  L  M  S  R  T  T  *  R  *  Y  V  V  T  G  I  I  F  C  L  C  D  Y  F  W  S  E  S  N  *  F  D  I  L  V  *  F  I  G  R  Y  *  L  I  F  S  D  E  C  L  L  *  T  L  L  T  I  C  E  V  R  D  D  M  E  V  S  </first_frame>
            <second_frame>  N  L  S  L  A  F  L  H  E  P  *  L  T  P  W  P  E  H  R  R  T  S  P  P  T  L  L  P  T  L  P  T  P  T  R  T  S  S  L  G  F  S  V  R  R  C  T  R  V  N  L  Q  V  L  R  P  P  M  I  V  I  C  S  S  V  T  S  L  T  R  L  G  L  L  A  L  K  L  L  T  P  I  C  F  Q  S  H  S  L  L  L  L  K  L  A  R  M  T  S  K  S  R  L  G  F  L  K  L  I  V  F  V  N  R  G  *  E  K  L  H  C  C  D  Y  C  V  F  M  F  *  C  L  E  R  L  K  G  N  M  L  S  L  E  *  F  S  A  Y  V  I  I  S  G  V  N  P  T  D  L  T  F  W  F  S  L  L  V  D  I  D  *  F  F  P  M  S  V  C  C  R  L  F  *  Q  Y  A  K  Y  V  M  T  W  K  Y  Q </second_frame>
            <third_frame>   T  F  H  S  L  F  C  T  S  P  S  *  R  H  G  R  N  T  G  E  L  L  H  R  R  Y  C  R  R  C  Q  R  R  R  G  R  Q  V  W  V  S  A  F  G  D  V  P  E  *  T  C  R  Y  Y  D  L  L  *  S  S  S  V  P  L  L  Q  V  S  R  D  L  A  C  S  P  *  S  F  *  L  R  S  A  S  K  V  T  L  C  C  S  *  S  S  Q  G  *  H  Q  N  Q  G  *  V  F  *  N  *  L  F  L  S  I  G  A  R  R  N  F  I  V  V  I  T  A  S  L  C  S  N  V  *  N  D  L  K  V  I  C  C  H  W  N  N  F  L  L  M  *  L  F  L  E  *  I  Q  L  I  *  H  F  G  L  V  Y  W  S  I  L  I  D  F  F  R  *  V  F  A  V  D  S  F  D  N  M  R  S  T  *  *  H  G  S  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="-"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61716" stop="61375"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KPFTRFSARALVNAMAGTPENFSTDATADAANADEDVKFGFQRSEMYQSKLAGTTTSYDRHLFLCYKSHETWPARLEASDSDLLPKSLSAALKARKDDIKIKVRFSKTDCFCQ*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="-"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61682" stop="61368"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>312</number_coding_nucleotides>
                  <number_encoded_amino_acids>104</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LTPWPEHRRTSPPTLLPTLPTPTRTSSLGFSVRRCTRVNLQVLRPPMIVICSSVTSLTRLGLLALKLLTPICFQSHSLLLLKLARMTSKSRLGFLKLIVFVNRG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="61733" e_stop="61411"/>
            <exon e_start="60744" e_stop="60449"/>
            <exon e_start="59967" e_stop="59884"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.912" e_score="0.991"/>
          <exon-intron don_prob="0.803" acc_prob="1.000" e_score="0.990"/>
          <exon-only e_score="0.964"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="61733" e_stop="61411" e_length="323"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.912">
            <gDNA_intron_boundary i_start="61410" i_stop="60745" i_length="666"/>
          </intron>
          <exon e_serial="2" e_score="0.990">
            <gDNA_exon_boundary e_start="60744" e_stop="60449" e_length="296"/>
          </exon>
          <intron i_serial="2" don_prob="0.803" acc_prob="1.000">
            <gDNA_intron_boundary i_start="60448" i_stop="59968" i_length="481"/>
          </intron>
          <exon e_serial="3" e_score="0.964">
            <gDNA_exon_boundary e_start="59967" e_stop="59884" e_length="84"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61733" stop="61411"/>
              <exon start="60744" stop="60449"/>
              <exon start="59967" stop="59884"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587867" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTTGCACTTCTCTCCAAAACCTTTCACTCGCTTTTCTGCACGAGCCCTAGTTAACGCCATGGCCGGAACACCGGAGAACTTCTCCACCGACGCTACTGCCGACGCTGCCAACGCCGACGAGGACGTCAAGTTTGGGTTTCAGCGTTCGGAGATGTACCAGAGTAAACTTGCAGGTACTACGACCTCCTATGATCGTCATCTGTTCCTCTGTTACAAGTCTCACGAGACTTGGCCTGCTCGCCTTGAAGCTTCTGACTCCGATCTGCTTCCAAAGTCACTCTCTGCTGCTCTTAAAGCTCGCAAGGATGACATCAAAATCAAG : GAGTCAGATGTGGATGCATTTGTTGATGATGTGCTTGTCAATGGCAATACTTGGAGCTCTGGATTGCAGGAGTCGCTGAGTGGTTCTTATGTGTTTGTCTGTGCCCACAATCTTCGTGATCGAAGATGTGGTGTTTGTGGACCTATTCTAATTGAGGAATTTAGCAAGCTCATTGAGTCCAAGAGCTTGAAAGACAAAGTTCGTGTGACAGCTTGTTCTCATATTGGTGGCCACAAGTATGCTGGTAATGTTATAATCTTCAGCTCAGGAAAGGACGGGAATATTGTTGGCCACTG : GTATGGCTATGTTACGCCAAGTGATGTACCTGCTTTGCTTGATGAGCATATTGGAGAGGGAAAAGTCATTGAACGACTTTGGAG</gDNA_template>
            <first_frame> A  C  T  S  L  Q  N  L  S  L  A  F  L  H  E  P  *  L  T  P  W  P  E  H  R  R  T  S  P  P  T  L  L  P  T  L  P  T  P  T  R  T  S  S  L  G  F  S  V  R  R  C  T  R  V  N  L  Q  V  L  R  P  P  M  I  V  I  C  S  S  V  T  S  L  T  R  L  G  L  L  A  L  K  L  L  T  P  I  C  F  Q  S  H  S  L  L  L  L  K  L  A  R  M  T  S  K  S  R :   S  Q  M  W  M  H  L  L  M  M  C  L  S  M  A  I  L  G  A  L  D  C  R  S  R  *  V  V  L  M  C  L  S  V  P  T  I  F  V  I  E  D  V  V  F  V  D  L  F  *  L  R  N  L  A  S  S  L  S  P  R  A  *  K  T  K  F  V  *  Q  L  V  L  I  L  V  A  T  S  M  L  V  M  L  *  S  S  A  Q  E  R  T  G  I  L  L  A  T   : G  M  A  M  L  R  Q  V  M  Y  L  L  C  L  M  S  I  L  E  R  E  K  S  L  N  D  F  G  </first_frame>
            <second_frame>  L  A  L  L  S  K  T  F  H  S  L  F  C  T  S  P  S  *  R  H  G  R  N  T  G  E  L  L  H  R  R  Y  C  R  R  C  Q  R  R  R  G  R  Q  V  W  V  S  A  F  G  D  V  P  E  *  T  C  R  Y  Y  D  L  L  *  S  S  S  V  P  L  L  Q  V  S  R  D  L  A  C  S  P  *  S  F  *  L  R  S  A  S  K  V  T  L  C  C  S  *  S  S  Q  G  *  H  Q  N  Q   : G  V  R  C  G  C  I  C  *  *  C  A  C  Q  W  Q  Y  L  E  L  W  I  A  G  V  A  E  W  F  L  C  V  C  L  C  P  Q  S  S  *  S  K  M  W  C  L  W  T  Y  S  N  *  G  I  *  Q  A  H  *  V  Q  E  L  E  R  Q  S  S  C  D  S  L  F  S  Y  W  W  P  Q  V  C  W  *  C  Y  N  L  Q  L  R  K  G  R  E  Y  C  W  P  L  :  V  W  L  C  Y  A  K  *  C  T  C  F  A  *  *  A  Y  W  R  G  K  S  H  *  T  T  L  E </second_frame>
            <third_frame>   L  H  F  S  P  K  P  F  T  R  F  S  A  R  A  L  V  N  A  M  A  G  T  P  E  N  F  S  T  D  A  T  A  D  A  A  N  A  D  E  D  V  K  F  G  F  Q  R  S  E  M  Y  Q  S  K  L  A  G  T  T  T  S  Y  D  R  H  L  F  L  C  Y  K  S  H  E  T  W  P  A  R  L  E  A  S  D  S  D  L  L  P  K  S  L  S  A  A  L  K  A  R  K  D  D  I  K  I  K  :  E  S  D  V  D  A  F  V  D  D  V  L  V  N  G  N  T  W  S  S  G  L  Q  E  S  L  S  G  S  Y  V  F  V  C  A  H  N  L  R  D  R  R  C  G  V  C  G  P  I  L  I  E  E  F  S  K  L  I  E  S  K  S  L  K  D  K  V  R  V  T  A  C  S  H  I  G  G  H  K  Y  A  G  N  V  I  I  F  S  S  G  K  D  G  N  I  V  G  H  W :   Y  G  Y  V  T  P  S  D  V  P  A  L  L  D  E  H  I  G  E  G  K  V  I  E  R  L  W   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="-"/>
                <serials PGL_serial="9" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61731" stop="61411"/>
                    <exon start="60744" stop="60449"/>
                    <exon start="59967" stop="59886"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>699</number_coding_nucleotides>
                  <number_encoded_amino_acids>233</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LHFSPKPFTRFSARALVNAMAGTPENFSTDATADAANADEDVKFGFQRSEMYQSKLAGTTTSYDRHLFLCYKSHETWPARLEASDSDLLPKSLSAALKARKDDIKIKESDVDAFVDDVLVNGNTWSSGLQESLSGSYVFVCAHNLRDRRCGVCGPILIEEFSKLIESKSLKDKVRVTACSHIGGHKYAGNVIIFSSGKDGNIVGHWYGYVTPSDVPALLDEHIGEGKVIERLW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="66122" PGL_stop="62441"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="66122" e_stop="65782"/>
            <exon e_start="65355" e_stop="64319"/>
            <exon e_start="63602" e_stop="62441"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.257" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="66122" e_stop="65782" e_length="341"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.257">
            <gDNA_intron_boundary i_start="65781" i_stop="65356" i_length="426"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="65355" e_stop="64319" e_length="1037"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="64318" i_stop="63603" i_length="716"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="63602" e_stop="62441" e_length="1162"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66122" stop="65782"/>
              <exon start="65355" stop="64319"/>
              <exon start="63602" stop="62441"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U564891" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATTACAATATAAGCGTTTACAAAAACAAGAAAAGGTGAAGATGAAGGAGAAAACAGAGTAAAATATAGAAAGAGAAAGAGAGAGAAAATCTTATGTATCAATTTCTTGACTAAGCTCTATTCTATTTCATTTGTTTGTTGTGAGTTTTGTTTGATTGATTCATTTACTCTGTTTGTATCCAAATATAATAATTAGTCACTCACTCTTTTTATTGTTACGATCGGATCTGAAAAAGGGAGAGGACCCAGAAAGAAAAAGGTGCAAAGCTGTTACCCTTTTTAAGTGGAAAGGGTCTCAATAATCATGGCACATCATTCATTTTTCTCCATTTGATAATCAG : TGTTTATACCAAAAAATTACAATGGAGTCTCTTGTTGATGGAATCAGTTCCTTGCCGAACGTTCACAATTCATTCGCTGCGGTTGAGTGCAATACATCTTTGGCCTCCAAGATAAGTCATCCTCCTTTGATGAAACAATCCGAAAACAAAGAGGCATCTATCTCATATCCAATAGCGATGGACCTTGGTTCCACCGTAGCTCATACTCAAACTGGATCAGTGACTGGTTCAAAGCATTTTAAAGCAAATGAAGATACTGTAAATCAATCAGCAGAAGGTTGTTCAGGAGAACAGGTTTTGGCTTTGGAAACTGAATCATCTATCAAGGATTTACATCATGTTTCGAAAAATGGTACTTCAAACGATGATTTGAATGCGACTGCCAAAGACTCAGGAATCACCTACTGTCCTAGTCCTCAAAACAGTTTTTATTCTGCTACACAGTACACAGAAGCCAAACAAAGTTTTTCCAACACAGAAGTCAGTGAATGCGCTAGCAGCACTGTGGACAAGTCTGGTGAAAGTGGTGATGTTAGCAACTCTTGTGATCTTGTTGAGAGCAGAAAAACAAGCTTCTACAGAGGCAGCACAGGTAGTGACGTTAGTGATGAAAGCAGCTCTAGTAGTTTCAATAGCACAGTATATAAACCACATAAGGCAAATGATACAAGGTGGGATGCAATACAAGTTATTAGAGCCCGTGAGGGAACATTGGGTTTTAACCACTTTAGACTGTTGAAGAGATTGGGATGTGGTGATATAGGAAGTGTTTTTCTAGCAGAGTTGATTGGCACAAGATGTTTCTTTGCCATGAAAGTGATGGACAAGGCAGCTCTAGAAAGTCGCAAGAAACTCGTGAGAGCTCAAACGGAAAGAGAGATACTGCAGTCTCTGGATCATCCCTTTCTACCAACACTGTATTCGCACTTTGAAACAGATAAATTTTCGTGCTTGGTGATGGAATTCTGCCCTGGTGGAGATTTGCATGCACTTAGGCAAAAGCAGCCAGGAAAATTCTTCCCGGAGCATGCTGCCAG : GTTTTACGTGGCTGAAGTCCTTCTTGCTCTAGAGTACTTGCACATGCTTGGAATCATTTACAGAGACCTTAAACCAGAGAATGTTTTGGTTCGAGAAGATGGCCATATAATGCTTTCTGATTTTGACCTCTCCTTGAGGTGTGCCGTGAGCCCAACTCTAGTTAGATCTTCAAATTCAAGCTTAGAGTGCAAGAGCTCATCATACTGTGTCCAGCCTGCTTGTATTGAGCCATCTTGTGTCGTACAGCCTGCATGTATACAACCTTCATGTTTTACACCACGTTTTCTAAGCAAGAACAAGAAAGAAAAGAAGTCCAAACAAAAGACAGAAACATATAACCAAGTGAACCGGCCTCTTCCAGAACTCCTTGCTGAACCAACGAGTGCTCGATCAATGTCTTTTGTGGGAACACATGAGTACCTAGCTCCAGAAATTATAAAGGGTGAAGGACACGGCAGTGCTGTAGATTGGTGGACATTTGGGATCTTTCTCTATGAACTCTTGTTTGGACAAACTCCTTTCAAAGGTGCAGGCAACAGGGCAACATTGTTTAACGTTGTTGGACAGCCCTTGAAATTTCCTGAAACACCTAGTGTTAGTTTTGCAGCAAGGGACTTGATAAGAGGCCTACTTGTGAAGGAGCCACAACATCGCCTTGCATATAGGCGAGGGGCTACTGAAATAAAACAACATCCTTTCTTCCAGAATGTGAACTGGGCACTTATAAGATGTACCAGTCCTCCAGATGTACCAAAGCCGTCCTCCATGACATATGATATGCCCCGAACACCACCAGCAGGAAAGGCCCCCGGACTTGATGTGAAGCCTTCAGGTAATTATTTTGAGATTGATTTCTTCTGAAGAATTCTTTTCCTTGGCAGCAATGCCCCCATTGCCGTTCTACGAAGAGCTCAACGTTGAGGAAGACACAGTTTTTGTGTTCCTTTATGCTAATGTAAAGTGCATACTCTGTTGAAATGCAAGATGCATAGGAATTAGATGGTGAAGGCCATTTTTCTTTGTATAAGTATGTTGTTGATATTAATGAAGAAGGCCTTGATGTGGCTATAAAGCTAGGCATTGCTGGATGTGATGTTTTAAAATTTTCAATTGAAGAATCAAAAGTTGATGTGCCATAATCCAGTCATTTAAAAAGTTGAT</gDNA_template>
            <first_frame> D  Y  N  I  S  V  Y  K  N  K  K  R  *  R  *  R  R  K  Q  S  K  I  *  K  E  K  E  R  E  N  L  M  Y  Q  F  L  D  *  A  L  F  Y  F  I  C  L  L  *  V  L  F  D  *  F  I  Y  S  V  C  I  Q  I  *  *  L  V  T  H  S  F  Y  C  Y  D  R  I  *  K  R  E  R  T  Q  K  E  K  G  A  K  L  L  P  F  L  S  G  K  G  L  N  N  H  G  T  S  F  I  F  L  H  L  I  I  S :   V  Y  T  K  K  L  Q  W  S  L  L  L  M  E  S  V  P  C  R  T  F  T  I  H  S  L  R  L  S  A  I  H  L  W  P  P  R  *  V  I  L  L  *  *  N  N  P  K  T  K  R  H  L  S  H  I  Q  *  R  W  T  L  V  P  P  *  L  I  L  K  L  D  Q  *  L  V  Q  S  I  L  K  Q  M  K  I  L  *  I  N  Q  Q  K  V  V  Q  E  N  R  F  W  L  W  K  L  N  H  L  S  R  I  Y  I  M  F  R  K  M  V  L  Q  T  M  I  *  M  R  L  P  K  T  Q  E  S  P  T  V  L  V  L  K  T  V  F  I  L  L  H  S  T  Q  K  P  N  K  V  F  P  T  Q  K  S  V  N  A  L  A  A  L  W  T  S  L  V  K  V  V  M  L  A  T  L  V  I  L  L  R  A  E  K  Q  A  S  T  E  A  A  Q  V  V  T  L  V  M  K  A  A  L  V  V  S  I  A  Q  Y  I  N  H  I  R  Q  M  I  Q  G  G  M  Q  Y  K  L  L  E  P  V  R  E  H  W  V  L  T  T  L  D  C  *  R  D  W  D  V  V  I  *  E  V  F  F  *  Q  S  *  L  A  Q  D  V  S  L  P  *  K  *  W  T  R  Q  L  *  K  V  A  R  N  S  *  E  L  K  R  K  E  R  Y  C  S  L  W  I  I  P  F  Y  Q  H  C  I  R  T  L  K  Q  I  N  F  R  A  W  *  W  N  S  A  L  V  E  I  C  M  H  L  G  K  S  S  Q  E  N  S  S  R  S  M  L  P   : G  F  T  W  L  K  S  F  L  L  *  S  T  C  T  C  L  E  S  F  T  E  T  L  N  Q  R  M  F  W  F  E  K  M  A  I  *  C  F  L  I  L  T  S  P  *  G  V  P  *  A  Q  L  *  L  D  L  Q  I  Q  A  *  S  A  R  A  H  H  T  V  S  S  L  L  V  L  S  H  L  V  S  Y  S  L  H  V  Y  N  L  H  V  L  H  H  V  F  *  A  R  T  R  K  K  R  S  P  N  K  R  Q  K  H  I  T  K  *  T  G  L  F  Q  N  S  L  L  N  Q  R  V  L  D  Q  C  L  L  W  E  H  M  S  T  *  L  Q  K  L  *  R  V  K  D  T  A  V  L  *  I  G  G  H  L  G  S  F  S  M  N  S  C  L  D  K  L  L  S  K  V  Q  A  T  G  Q  H  C  L  T  L  L  D  S  P  *  N  F  L  K  H  L  V  L  V  L  Q  Q  G  T  *  *  E  A  Y  L  *  R  S  H  N  I  A  L  H  I  G  E  G  L  L  K  *  N  N  I  L  S  S  R  M  *  T  G  H  L  *  D  V  P  V  L  Q  M  Y  Q  S  R  P  P  *  H  M  I  C  P  E  H  H  Q  Q  E  R  P  P  D  L  M  *  S  L  Q  V  I  I  L  R  L  I  S  S  E  E  F  F  S  L  A  A  M  P  P  L  P  F  Y  E  E  L  N  V  E  E  D  T  V  F  V  F  L  Y  A  N  V  K  C  I  L  C  *  N  A  R  C  I  G  I  R  W  *  R  P  F  F  F  V  *  V  C  C  *  Y  *  *  R  R  P  *  C  G  Y  K  A  R  H  C  W  M  *  C  F  K  I  F  N  *  R  I  K  S  *  C  A  I  I  Q  S  F  K  K  L   </first_frame>
            <second_frame>  I  T  I  *  A  F  T  K  T  R  K  G  E  D  E  G  E  N  R  V  K  Y  R  K  R  K  R  E  K  I  L  C  I  N  F  L  T  K  L  Y  S  I  S  F  V  C  C  E  F  C  L  I  D  S  F  T  L  F  V  S  K  Y  N  N  *  S  L  T  L  F  I  V  T  I  G  S  E  K  G  R  G  P  R  K  K  K  V  Q  S  C  Y  P  F  *  V  E  R  V  S  I  I  M  A  H  H  S  F  F  S  I  *  *  S   : V  F  I  P  K  N  Y  N  G  V  S  C  *  W  N  Q  F  L  A  E  R  S  Q  F  I  R  C  G  *  V  Q  Y  I  F  G  L  Q  D  K  S  S  S  F  D  E  T  I  R  K  Q  R  G  I  Y  L  I  S  N  S  D  G  P  W  F  H  R  S  S  Y  S  N  W  I  S  D  W  F  K  A  F  *  S  K  *  R  Y  C  K  S  I  S  R  R  L  F  R  R  T  G  F  G  F  G  N  *  I  I  Y  Q  G  F  T  S  C  F  E  K  W  Y  F  K  R  *  F  E  C  D  C  Q  R  L  R  N  H  L  L  S  *  S  S  K  Q  F  L  F  C  Y  T  V  H  R  S  Q  T  K  F  F  Q  H  R  S  Q  *  M  R  *  Q  H  C  G  Q  V  W  *  K  W  *  C  *  Q  L  L  *  S  C  *  E  Q  K  N  K  L  L  Q  R  Q  H  R  *  *  R  *  *  *  K  Q  L  *  *  F  Q  *  H  S  I  *  T  T  *  G  K  *  Y  K  V  G  C  N  T  S  Y  *  S  P  *  G  N  I  G  F  *  P  L  *  T  V  E  E  I  G  M  W  *  Y  R  K  C  F  S  S  R  V  D  W  H  K  M  F  L  C  H  E  S  D  G  Q  G  S  S  R  K  S  Q  E  T  R  E  S  S  N  G  K  R  D  T  A  V  S  G  S  S  L  S  T  N  T  V  F  A  L  *  N  R  *  I  F  V  L  G  D  G  I  L  P  W  W  R  F  A  C  T  *  A  K  A  A  R  K  I  L  P  G  A  C  C  Q  :  V  L  R  G  *  S  P  S  C  S  R  V  L  A  H  A  W  N  H  L  Q  R  P  *  T  R  E  C  F  G  S  R  R  W  P  Y  N  A  F  *  F  *  P  L  L  E  V  C  R  E  P  N  S  S  *  I  F  K  F  K  L  R  V  Q  E  L  I  I  L  C  P  A  C  L  Y  *  A  I  L  C  R  T  A  C  M  Y  T  T  F  M  F  Y  T  T  F  S  K  Q  E  Q  E  R  K  E  V  Q  T  K  D  R  N  I  *  P  S  E  P  A  S  S  R  T  P  C  *  T  N  E  C  S  I  N  V  F  C  G  N  T  *  V  P  S  S  R  N  Y  K  G  *  R  T  R  Q  C  C  R  L  V  D  I  W  D  L  S  L  *  T  L  V  W  T  N  S  F  Q  R  C  R  Q  Q  G  N  I  V  *  R  C  W  T  A  L  E  I  S  *  N  T  *  C  *  F  C  S  K  G  L  D  K  R  P  T  C  E  G  A  T  T  S  P  C  I  *  A  R  G  Y  *  N  K  T  T  S  F  L  P  E  C  E  L  G  T  Y  K  M  Y  Q  S  S  R  C  T  K  A  V  L  H  D  I  *  Y  A  P  N  T  T  S  R  K  G  P  R  T  *  C  E  A  F  R  *  L  F  *  D  *  F  L  L  K  N  S  F  P  W  Q  Q  C  P  H  C  R  S  T  K  S  S  T  L  R  K  T  Q  F  L  C  S  F  M  L  M  *  S  A  Y  S  V  E  M  Q  D  A  *  E  L  D  G  E  G  H  F  S  L  Y  K  Y  V  V  D  I  N  E  E  G  L  D  V  A  I  K  L  G  I  A  G  C  D  V  L  K  F  S  I  E  E  S  K  V  D  V  P  *  S  S  H  L  K  S  *  </second_frame>
            <third_frame>   L  Q  Y  K  R  L  Q  K  Q  E  K  V  K  M  K  E  K  T  E  *  N  I  E  R  E  R  E  R  K  S  Y  V  S  I  S  *  L  S  S  I  L  F  H  L  F  V  V  S  F  V  *  L  I  H  L  L  C  L  Y  P  N  I  I  I  S  H  S  L  F  L  L  L  R  S  D  L  K  K  G  E  D  P  E  R  K  R  C  K  A  V  T  L  F  K  W  K  G  S  Q  *  S  W  H  I  I  H  F  S  P  F  D  N  Q  :  C  L  Y  Q  K  I  T  M  E  S  L  V  D  G  I  S  S  L  P  N  V  H  N  S  F  A  A  V  E  C  N  T  S  L  A  S  K  I  S  H  P  P  L  M  K  Q  S  E  N  K  E  A  S  I  S  Y  P  I  A  M  D  L  G  S  T  V  A  H  T  Q  T  G  S  V  T  G  S  K  H  F  K  A  N  E  D  T  V  N  Q  S  A  E  G  C  S  G  E  Q  V  L  A  L  E  T  E  S  S  I  K  D  L  H  H  V  S  K  N  G  T  S  N  D  D  L  N  A  T  A  K  D  S  G  I  T  Y  C  P  S  P  Q  N  S  F  Y  S  A  T  Q  Y  T  E  A  K  Q  S  F  S  N  T  E  V  S  E  C  A  S  S  T  V  D  K  S  G  E  S  G  D  V  S  N  S  C  D  L  V  E  S  R  K  T  S  F  Y  R  G  S  T  G  S  D  V  S  D  E  S  S  S  S  S  F  N  S  T  V  Y  K  P  H  K  A  N  D  T  R  W  D  A  I  Q  V  I  R  A  R  E  G  T  L  G  F  N  H  F  R  L  L  K  R  L  G  C  G  D  I  G  S  V  F  L  A  E  L  I  G  T  R  C  F  F  A  M  K  V  M  D  K  A  A  L  E  S  R  K  K  L  V  R  A  Q  T  E  R  E  I  L  Q  S  L  D  H  P  F  L  P  T  L  Y  S  H  F  E  T  D  K  F  S  C  L  V  M  E  F  C  P  G  G  D  L  H  A  L  R  Q  K  Q  P  G  K  F  F  P  E  H  A  A  R :   F  Y  V  A  E  V  L  L  A  L  E  Y  L  H  M  L  G  I  I  Y  R  D  L  K  P  E  N  V  L  V  R  E  D  G  H  I  M  L  S  D  F  D  L  S  L  R  C  A  V  S  P  T  L  V  R  S  S  N  S  S  L  E  C  K  S  S  S  Y  C  V  Q  P  A  C  I  E  P  S  C  V  V  Q  P  A  C  I  Q  P  S  C  F  T  P  R  F  L  S  K  N  K  K  E  K  K  S  K  Q  K  T  E  T  Y  N  Q  V  N  R  P  L  P  E  L  L  A  E  P  T  S  A  R  S  M  S  F  V  G  T  H  E  Y  L  A  P  E  I  I  K  G  E  G  H  G  S  A  V  D  W  W  T  F  G  I  F  L  Y  E  L  L  F  G  Q  T  P  F  K  G  A  G  N  R  A  T  L  F  N  V  V  G  Q  P  L  K  F  P  E  T  P  S  V  S  F  A  A  R  D  L  I  R  G  L  L  V  K  E  P  Q  H  R  L  A  Y  R  R  G  A  T  E  I  K  Q  H  P  F  F  Q  N  V  N  W  A  L  I  R  C  T  S  P  P  D  V  P  K  P  S  S  M  T  Y  D  M  P  R  T  P  P  A  G  K  A  P  G  L  D  V  K  P  S  G  N  Y  F  E  I  D  F  F  *  R  I  L  F  L  G  S  N  A  P  I  A  V  L  R  R  A  Q  R  *  G  R  H  S  F  C  V  P  L  C  *  C  K  V  H  T  L  L  K  C  K  M  H  R  N  *  M  V  K  A  I  F  L  C  I  S  M  L  L  I  L  M  K  K  A  L  M  W  L  *  S  *  A  L  L  D  V  M  F  *  N  F  Q  L  K  N  Q  K  L  M  C  H  N  P  V  I  *  K  V  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65820" stop="65782"/>
                    <exon start="65355" stop="64319"/>
                    <exon start="63602" stop="62741"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1935</number_coding_nucleotides>
                  <number_encoded_amino_acids>645</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SWHIIHFSPFDNQCLYQKITMESLVDGISSLPNVHNSFAAVECNTSLASKISHPPLMKQSENKEASISYPIAMDLGSTVAHTQTGSVTGSKHFKANEDTVNQSAEGCSGEQVLALETESSIKDLHHVSKNGTSNDDLNATAKDSGITYCPSPQNSFYSATQYTEAKQSFSNTEVSECASSTVDKSGESGDVSNSCDLVESRKTSFYRGSTGSDVSDESSSSSFNSTVYKPHKANDTRWDAIQVIRAREGTLGFNHFRLLKRLGCGDIGSVFLAELIGTRCFFAMKVMDKAALESRKKLVRAQTEREILQSLDHPFLPTLYSHFETDKFSCLVMEFCPGGDLHALRQKQPGKFFPEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVRSSNSSLECKSSSYCVQPACIEPSCVVQPACIQPSCFTPRFLSKNKKEKKSKQKTETYNQVNRPLPELLAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGQTPFKGAGNRATLFNVVGQPLKFPETPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCTSPPDVPKPSSMTYDMPRTPPAGKAPGLDVKPSGNYFEIDFF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="73447" PGL_stop="69162"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73447" e_stop="73408"/>
            <exon e_start="73323" e_stop="73201"/>
            <exon e_start="69427" e_stop="69162"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.936" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.927" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="73447" e_stop="73408" e_length="40"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.936">
            <gDNA_intron_boundary i_start="73407" i_stop="73324" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="73323" e_stop="73201" e_length="123"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.927">
            <gDNA_intron_boundary i_start="73200" i_stop="69428" i_length="3773"/>
          </intron>
          <exon e_serial="3" e_score="0.992">
            <gDNA_exon_boundary e_start="69427" e_stop="69162" e_length="266"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73447" stop="73408"/>
              <exon start="73323" stop="73201"/>
              <exon start="69427" stop="69162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U603920" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGAAATGGCTCTGGTTTCTAACACTAACTCATTCTTAAAG : TCACAGAGGCACCAAGTTTACTGCAGAAAGAAGGAGAAAGATAAGAGTCAAAATCCCCAACCCTATAAAGTCATTGAAATTTCACCCCCTCCCAAGAACCTTGGCATACGTTGCCTCCCCTCG : AACTTGCAGTGTGGAGAAAGTGTAACCATCGAAGGCCGAGCTTACACCATTTCAGCTGTAACTCATCGTTATCAGCTTCGTAAAGGGAAATACGAGCCTAGTGAGAAGAGGCTTGATGTGTTGTCTACTGGAAGATACATCTTAAATTTGTACTTAGAAAATTTGCTAGAACAATCTTGACTATGATGTAGATTACTCCACTTTTCCCTTCATCTTTATGTATACATTATGAAAATACAACTTCATTCAATTGCCTGTGTCAAATG</gDNA_template>
            <first_frame> G  N  G  S  G  F  *  H  *  L  I  L  K   : V  T  E  A  P  S  L  L  Q  K  E  G  E  R  *  E  S  K  S  P  T  L  *  S  H  *  N  F  T  P  S  Q  E  P  W  H  T  L  P  P  L   : E  L  A  V  W  R  K  C  N  H  R  R  P  S  L  H  H  F  S  C  N  S  S  L  S  A  S  *  R  E  I  R  A  *  *  E  E  A  *  C  V  V  Y  W  K  I  H  L  K  F  V  L  R  K  F  A  R  T  I  L  T  M  M  *  I  T  P  L  F  P  S  S  L  C  I  H  Y  E  N  T  T  S  F  N  C  L  C  Q  M </first_frame>
            <second_frame>  E  M  A  L  V  S  N  T  N  S  F  L  K  :  S  Q  R  H  Q  V  Y  C  R  K  K  E  K  D  K  S  Q  N  P  Q  P  Y  K  V  I  E  I  S  P  P  P  K  N  L  G  I  R  C  L  P  S  :  N  L  Q  C  G  E  S  V  T  I  E  G  R  A  Y  T  I  S  A  V  T  H  R  Y  Q  L  R  K  G  K  Y  E  P  S  E  K  R  L  D  V  L  S  T  G  R  Y  I  L  N  L  Y  L  E  N  L  L  E  Q  S  *  L  *  C  R  L  L  H  F  S  L  H  L  Y  V  Y  I  M  K  I  Q  L  H  S  I  A  C  V  K   </second_frame>
            <third_frame>   K  W  L  W  F  L  T  L  T  H  S  *  S :   H  R  G  T  K  F  T  A  E  R  R  R  K  I  R  V  K  I  P  N  P  I  K  S  L  K  F  H  P  L  P  R  T  L  A  Y  V  A  S  P  R :   T  C  S  V  E  K  V  *  P  S  K  A  E  L  T  P  F  Q  L  *  L  I  V  I  S  F  V  K  G  N  T  S  L  V  R  R  G  L  M  C  C  L  L  E  D  T  S  *  I  C  T  *  K  I  C  *  N  N  L  D  Y  D  V  D  Y  S  T  F  P  F  I  F  M  Y  T  L  *  K  Y  N  F  I  Q  L  P  V  S  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73446" stop="73408"/>
                    <exon start="73323" stop="73201"/>
                    <exon start="69427" stop="69248"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EMALVSNTNSFLKSQRHQVYCRKKEKDKSQNPQPYKVIEISPPPKNLGIRCLPSNLQCGESVTIEGRAYTISAVTHRYQLRKGKYEPSEKRLDVLSTGRYILNLYLENLLEQS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="78674" PGL_stop="74980"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="78674" e_stop="78352"/>
            <exon e_start="77239" e_stop="77199"/>
            <exon e_start="77115" e_stop="76952"/>
            <exon e_start="76830" e_stop="76728"/>
            <exon e_start="76632" e_stop="76463"/>
            <exon e_start="75866" e_stop="74980"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.979" e_score="0.997"/>
          <exon-intron don_prob="0.899" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.731" acc_prob="0.915" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="78674" e_stop="78352" e_length="323"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.979">
            <gDNA_intron_boundary i_start="78351" i_stop="77240" i_length="1112"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="77239" e_stop="77199" e_length="41"/>
          </exon>
          <intron i_serial="2" don_prob="0.899" acc_prob="0.985">
            <gDNA_intron_boundary i_start="77198" i_stop="77116" i_length="83"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="77115" e_stop="76952" e_length="164"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.994">
            <gDNA_intron_boundary i_start="76951" i_stop="76831" i_length="121"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="76830" e_stop="76728" e_length="103"/>
          </exon>
          <intron i_serial="4" don_prob="0.731" acc_prob="0.915">
            <gDNA_intron_boundary i_start="76727" i_stop="76633" i_length="95"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="76632" e_stop="76463" e_length="170"/>
          </exon>
          <intron i_serial="5" don_prob="0.969" acc_prob="0.995">
            <gDNA_intron_boundary i_start="76462" i_stop="75867" i_length="596"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="75866" e_stop="74980" e_length="887"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78674" stop="78352"/>
              <exon start="77239" stop="77199"/>
              <exon start="77115" stop="76952"/>
              <exon start="76830" stop="76728"/>
              <exon start="76632" stop="76463"/>
              <exon start="75866" stop="74980"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566289" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAATCCGAACATACTCTAATCGAACGTTCCCCTATCAAACTATCTAGGGTTTTGGTATATAAAAGCGCCGACAACGTCCTGTACTAGATCAGACCGCATATTTTCACGGTGAACCTCAGAGCTCCGGTTCCGATTCATTGAAAACTTCCTTGAAAAACACCGACAAACGTCTTCTTCTCGATGGAGGAACAAAATGGGACTGTAAATGGTGTTAAAATCAAGCTGGAGGAAGAAGAAACTAATGACGACCTTAGAACTACTCCCGACCATCAAAACGACGCCGGCGCTTCTCAGCCTCTTACCGGAGATGGTGCTAGTCCTGG : AAAGATTTTTATTGGGGGCTTGGCTAGAGAGACAACTTCAG : CTCAATTTGTCAAGCACTTCGGTAAATATGGTGAAATTATTGATTCCGTGATTATGAAGGAAAGGCGGACAGGACAGCCACGTGGGTTTGGTTTTGTGACTTATGCTGACCCATCCGTGGTAGATAAAGTCATTGAGGACGACCATGTTATAAATGGAAAGCAA : GTGGAAATCAAGCGAACTATACCTAGAGGAGGAGGTTCCAGCTCAAAAGATTTCAAGACAAAGAAGATTTTTGTGGGCGGTATCCCAACAACAATTAGTGAAG : ATGAGTTCAGAGACTTCTTTTTAAAGTTTGGAGAGGTGAAAGAGCACCAGATCATGCGTGACCATTCTACTAGTCGTTCTCGTGGCTTTGGATTCATCACTTTTGACACAGAAAAATCTGTCGAGGATATCTTGGCTAATGGAAACAAGCTTGATTTTTCTGGAACCCAG : GTGGAAATCAAGAAGGCTGAGCCCAAGAGACCTAATGCGCCACAACCAGCCCCATTCAGGCGTCAAGGGAATCCAAGAGCTGCATTTGGTGGTGGATTTTCAGATGCTTATGGTGGATATGGAGACTCTGGTTATGGTGTTGTTGCTGGTCCTGGTCCTGGTCCTTACAGGTCTGGTGGCCCCTATGGTGGCAGATCCAGTGCATTTGGTGGATATAGTGGAGGAGGAATGGGTGGATATGGAGCATATGGTGGCGGTGGTGCCTACGGAGGAGGTTTCAGGGAGGAGGCTTCTTTTGGGTATTCTAGCCGTTATGGCAGTGGAGCCTTTGGTAGAGGCTACGATGTTGGTGGTGGATATGGAGGAGCAGGTGAAGGTTATGGAGGATATGGTGCTGGTGGCGGTGGATATGGCAGTGGATATGGTGCCGCTGGTCTTGGCAGTGGGTATGGAGGAGATAGTGCAGGAGGTTCAATGTATGGAAGCAGTAGAGGAAGCTATGGTGGTGCTGGTGCTGGTTCAGGCAGATACCACCCTTATGGAAGATAGAAAGTGAAATGTTGAAGGTGCAAAGCTGAATTGTTTCTGGCTTGGTGATTTTAAGCTTATGACCAGAGATGTATACTCATCAAGCACTTGTTGAGAGCTAAATCTTGTTTTTTTTTCTCTTATCGAATTTTAATTGAAAAAATATTAGTTCAGTTAATATACTGGTGTCTTTGATATCGATTGGTTTATCAAGGAACACGACTCATCCATCTGCAATCCTCAAGCAGCATTGTCAAATTGATGTTCAATTCTTTTATGTGCTAGAGGTTTGCATCTCTTTTTTCTTTTAATTAGTTTGGACTAAACCAGTAAATTTATGGATCCTAGAGACTGTCTAA</gDNA_template>
            <first_frame> *  S  E  H  T  L  I  E  R  S  P  I  K  L  S  R  V  L  V  Y  K  S  A  D  N  V  L  Y  *  I  R  P  H  I  F  T  V  N  L  R  A  P  V  P  I  H  *  K  L  P  *  K  T  P  T  N  V  F  F  S  M  E  E  Q  N  G  T  V  N  G  V  K  I  K  L  E  E  E  E  T  N  D  D  L  R  T  T  P  D  H  Q  N  D  A  G  A  S  Q  P  L  T  G  D  G  A  S  P  G :   K  I  F  I  G  G  L  A  R  E  T  T  S   : A  Q  F  V  K  H  F  G  K  Y  G  E  I  I  D  S  V  I  M  K  E  R  R  T  G  Q  P  R  G  F  G  F  V  T  Y  A  D  P  S  V  V  D  K  V  I  E  D  D  H  V  I  N  G  K  Q  :  V  E  I  K  R  T  I  P  R  G  G  G  S  S  S  K  D  F  K  T  K  K  I  F  V  G  G  I  P  T  T  I  S  E   : D  E  F  R  D  F  F  L  K  F  G  E  V  K  E  H  Q  I  M  R  D  H  S  T  S  R  S  R  G  F  G  F  I  T  F  D  T  E  K  S  V  E  D  I  L  A  N  G  N  K  L  D  F  S  G  T  Q  :  V  E  I  K  K  A  E  P  K  R  P  N  A  P  Q  P  A  P  F  R  R  Q  G  N  P  R  A  A  F  G  G  G  F  S  D  A  Y  G  G  Y  G  D  S  G  Y  G  V  V  A  G  P  G  P  G  P  Y  R  S  G  G  P  Y  G  G  R  S  S  A  F  G  G  Y  S  G  G  G  M  G  G  Y  G  A  Y  G  G  G  G  A  Y  G  G  G  F  R  E  E  A  S  F  G  Y  S  S  R  Y  G  S  G  A  F  G  R  G  Y  D  V  G  G  G  Y  G  G  A  G  E  G  Y  G  G  Y  G  A  G  G  G  G  Y  G  S  G  Y  G  A  A  G  L  G  S  G  Y  G  G  D  S  A  G  G  S  M  Y  G  S  S  R  G  S  Y  G  G  A  G  A  G  S  G  R  Y  H  P  Y  G  R  *  K  V  K  C  *  R  C  K  A  E  L  F  L  A  W  *  F  *  A  Y  D  Q  R  C  I  L  I  K  H  L  L  R  A  K  S  C  F  F  F  S  Y  R  I  L  I  E  K  I  L  V  Q  L  I  Y  W  C  L  *  Y  R  L  V  Y  Q  G  T  R  L  I  H  L  Q  S  S  S  S  I  V  K  L  M  F  N  S  F  M  C  *  R  F  A  S  L  F  S  F  N  *  F  G  L  N  Q  *  I  Y  G  S  *  R  L  S   </first_frame>
            <second_frame>  N  P  N  I  L  *  S  N  V  P  L  S  N  Y  L  G  F  W  Y  I  K  A  P  T  T  S  C  T  R  S  D  R  I  F  S  R  *  T  S  E  L  R  F  R  F  I  E  N  F  L  E  K  H  R  Q  T  S  S  S  R  W  R  N  K  M  G  L  *  M  V  L  K  S  S  W  R  K  K  K  L  M  T  T  L  E  L  L  P  T  I  K  T  T  P  A  L  L  S  L  L  P  E  M  V  L  V  L   : E  R  F  L  L  G  A  W  L  E  R  Q  L  Q  :  L  N  L  S  S  T  S  V  N  M  V  K  L  L  I  P  *  L  *  R  K  G  G  Q  D  S  H  V  G  L  V  L  *  L  M  L  T  H  P  W  *  I  K  S  L  R  T  T  M  L  *  M  E  S  K :   W  K  S  S  E  L  Y  L  E  E  E  V  P  A  Q  K  I  S  R  Q  R  R  F  L  W  A  V  S  Q  Q  Q  L  V  K  :  M  S  S  E  T  S  F  *  S  L  E  R  *  K  S  T  R  S  C  V  T  I  L  L  V  V  L  V  A  L  D  S  S  L  L  T  Q  K  N  L  S  R  I  S  W  L  M  E  T  S  L  I  F  L  E  P  R :   W  K  S  R  R  L  S  P  R  D  L  M  R  H  N  Q  P  H  S  G  V  K  G  I  Q  E  L  H  L  V  V  D  F  Q  M  L  M  V  D  M  E  T  L  V  M  V  L  L  L  V  L  V  L  V  L  T  G  L  V  A  P  M  V  A  D  P  V  H  L  V  D  I  V  E  E  E  W  V  D  M  E  H  M  V  A  V  V  P  T  E  E  V  S  G  R  R  L  L  L  G  I  L  A  V  M  A  V  E  P  L  V  E  A  T  M  L  V  V  D  M  E  E  Q  V  K  V  M  E  D  M  V  L  V  A  V  D  M  A  V  D  M  V  P  L  V  L  A  V  G  M  E  E  I  V  Q  E  V  Q  C  M  E  A  V  E  E  A  M  V  V  L  V  L  V  Q  A  D  T  T  L  M  E  D  R  K  *  N  V  E  G  A  K  L  N  C  F  W  L  G  D  F  K  L  M  T  R  D  V  Y  S  S  S  T  C  *  E  L  N  L  V  F  F  S  L  I  E  F  *  L  K  K  Y  *  F  S  *  Y  T  G  V  F  D  I  D  W  F  I  K  E  H  D  S  S  I  C  N  P  Q  A  A  L  S  N  *  C  S  I  L  L  C  A  R  G  L  H  L  F  F  L  L  I  S  L  D  *  T  S  K  F  M  D  P  R  D  C  L  </second_frame>
            <third_frame>   I  R  T  Y  S  N  R  T  F  P  Y  Q  T  I  *  G  F  G  I  *  K  R  R  Q  R  P  V  L  D  Q  T  A  Y  F  H  G  E  P  Q  S  S  G  S  D  S  L  K  T  S  L  K  N  T  D  K  R  L  L  L  D  G  G  T  K  W  D  C  K  W  C  *  N  Q  A  G  G  R  R  N  *  *  R  P  *  N  Y  S  R  P  S  K  R  R  R  R  F  S  A  S  Y  R  R  W  C  *  S  W  :  K  D  F  Y  W  G  L  G  *  R  D  N  F  S :   S  I  C  Q  A  L  R  *  I  W  *  N  Y  *  F  R  D  Y  E  G  K  A  D  R  T  A  T  W  V  W  F  C  D  L  C  *  P  I  R  G  R  *  S  H  *  G  R  P  C  Y  K  W  K  A   : S  G  N  Q  A  N  Y  T  *  R  R  R  F  Q  L  K  R  F  Q  D  K  E  D  F  C  G  R  Y  P  N  N  N  *  *  R :   *  V  Q  R  L  L  F  K  V  W  R  G  E  R  A  P  D  H  A  *  P  F  Y  *  S  F  S  W  L  W  I  H  H  F  *  H  R  K  I  C  R  G  Y  L  G  *  W  K  Q  A  *  F  F  W  N  P   : G  G  N  Q  E  G  *  A  Q  E  T  *  C  A  T  T  S  P  I  Q  A  S  R  E  S  K  S  C  I  W  W  W  I  F  R  C  L  W  W  I  W  R  L  W  L  W  C  C  C  W  S  W  S  W  S  L  Q  V  W  W  P  L  W  W  Q  I  Q  C  I  W  W  I  *  W  R  R  N  G  W  I  W  S  I  W  W  R  W  C  L  R  R  R  F  Q  G  G  G  F  F  W  V  F  *  P  L  W  Q  W  S  L  W  *  R  L  R  C  W  W  W  I  W  R  S  R  *  R  L  W  R  I  W  C  W  W  R  W  I  W  Q  W  I  W  C  R  W  S  W  Q  W  V  W  R  R  *  C  R  R  F  N  V  W  K  Q  *  R  K  L  W  W  C  W  C  W  F  R  Q  I  P  P  L  W  K  I  E  S  E  M  L  K  V  Q  S  *  I  V  S  G  L  V  I  L  S  L  *  P  E  M  Y  T  H  Q  A  L  V  E  S  *  I  L  F  F  F  L  L  S  N  F  N  *  K  N  I  S  S  V  N  I  L  V  S  L  I  S  I  G  L  S  R  N  T  T  H  P  S  A  I  L  K  Q  H  C  Q  I  D  V  Q  F  F  Y  V  L  E  V  C  I  S  F  F  F  *  L  V  W  T  K  P  V  N  L  W  I  L  E  T  V  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="78521" stop="78352"/>
                    <exon start="77239" stop="77199"/>
                    <exon start="77115" stop="76952"/>
                    <exon start="76830" stop="76728"/>
                    <exon start="76632" stop="76463"/>
                    <exon start="75866" stop="75318"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1194</number_coding_nucleotides>
                  <number_encoded_amino_acids>398</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KTPTNVFFSMEEQNGTVNGVKIKLEEEETNDDLRTTPDHQNDAGASQPLTGDGASPGKIFIGGLARETTSAQFVKHFGKYGEIIDSVIMKERRTGQPRGFGFVTYADPSVVDKVIEDDHVINGKQVEIKRTIPRGGGSSSKDFKTKKIFVGGIPTTISEDEFRDFFLKFGEVKEHQIMRDHSTSRSRGFGFITFDTEKSVEDILANGNKLDFSGTQVEIKKAEPKRPNAPQPAPFRRQGNPRAAFGGGFSDAYGGYGDSGYGVVAGPGPGPYRSGGPYGGRSSAFGGYSGGGMGGYGAYGGGGAYGGGFREEASFGYSSRYGSGAFGRGYDVGGGYGGAGEGYGGYGAGGGGYGSGYGAAGLGSGYGGDSAGGSMYGSSRGSYGGAGAGSGRYHPYGR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="85992" PGL_stop="85017"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85992" e_stop="85963"/>
            <exon e_start="85872" e_stop="85250"/>
            <exon e_start="85090" e_stop="85017"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.988" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.995" e_score="0.994"/>
          <exon-only e_score="0.959"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="85992" e_stop="85963" e_length="30"/>
          </exon>
          <intron i_serial="1" don_prob="0.988" acc_prob="0.999">
            <gDNA_intron_boundary i_start="85962" i_stop="85873" i_length="90"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="85872" e_stop="85250" e_length="623"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.995">
            <gDNA_intron_boundary i_start="85249" i_stop="85091" i_length="159"/>
          </intron>
          <exon e_serial="3" e_score="0.959">
            <gDNA_exon_boundary e_start="85090" e_stop="85017" e_length="74"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85992" stop="85963"/>
              <exon start="85872" stop="85250"/>
              <exon start="85090" stop="85017"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576125" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTTTGAGGACTACCAGTTAGGTGATAAAG : GTCAGGAATGTGGTTCTTCATTTAGTGTTTCCACCGCACAGGGATTTGGTCTCATCAACAACACGAGGCCTTTCATATCACCAGCATTAAACCAATCAACTGTTGATCAACCTTTTTATTCCCATTTTCCAAGTACATTTACAGTGGAAAGAGCAGGGGTTGACTCTCTATCAAAAAATTCTACCTCATTAGCACAACAGGCCATTTCCCATATATTTCCCCCAAACCCGTCATTGTTGAACTCTTGTGGCACTAGAAATAGAGTGCAATCTACTGCCTCAGATGTTTCCTTTTCTCCGTGGAACAATTCAAATCAGTTTGCACCTTTTAAACCAGCTTCCAGTTCTTCCACTGCCTTCACTACTCCATTAAGGAACCCATTTTCTTTATCAACATCTGCCCCTCTATCTCCATGTTCGGTCTCACCTTCCACATATCCTTTGTTAACTAAGCCATCAGGCCATGATTTTTATCAGAAGAACTCTTTTTCTACCACTCCTGTTTTAACTACAGGAGGCGCTTCACAATCCACGTTATGCTTGAACTGCCTAAAGCAGTCACAGCCTACTCCACCAGGACTTTCTAATGTTTCAAGCACTCCACTTGCTGCGAATCAAAATACT : CCTCTGTTCATTGGTCCTCTGCAGCCAGAAATAACTCCTAAAGTTGGAACAACACTCCCAACAACCAATGCTTC</gDNA_template>
            <first_frame> G  L  R  T  T  S  *  V  I  K  :  V  R  N  V  V  L  H  L  V  F  P  P  H  R  D  L  V  S  S  T  T  R  G  L  S  Y  H  Q  H  *  T  N  Q  L  L  I  N  L  F  I  P  I  F  Q  V  H  L  Q  W  K  E  Q  G  L  T  L  Y  Q  K  I  L  P  H  *  H  N  R  P  F  P  I  Y  F  P  Q  T  R  H  C  *  T  L  V  A  L  E  I  E  C  N  L  L  P  Q  M  F  P  F  L  R  G  T  I  Q  I  S  L  H  L  L  N  Q  L  P  V  L  P  L  P  S  L  L  H  *  G  T  H  F  L  Y  Q  H  L  P  L  Y  L  H  V  R  S  H  L  P  H  I  L  C  *  L  S  H  Q  A  M  I  F  I  R  R  T  L  F  L  P  L  L  F  *  L  Q  E  A  L  H  N  P  R  Y  A  *  T  A  *  S  S  H  S  L  L  H  Q  D  F  L  M  F  Q  A  L  H  L  L  R  I  K  I  L :   L  C  S  L  V  L  C  S  Q  K  *  L  L  K  L  E  Q  H  S  Q  Q  P  M  L  </first_frame>
            <second_frame>  V  *  G  L  P  V  R  *  *  R :   S  G  M  W  F  F  I  *  C  F  H  R  T  G  I  W  S  H  Q  Q  H  E  A  F  H  I  T  S  I  K  P  I  N  C  *  S  T  F  L  F  P  F  S  K  Y  I  Y  S  G  K  S  R  G  *  L  S  I  K  K  F  Y  L  I  S  T  T  G  H  F  P  Y  I  S  P  K  P  V  I  V  E  L  L  W  H  *  K  *  S  A  I  Y  C  L  R  C  F  L  F  S  V  E  Q  F  K  S  V  C  T  F  *  T  S  F  Q  F  F  H  C  L  H  Y  S  I  K  E  P  I  F  F  I  N  I  C  P  S  I  S  M  F  G  L  T  F  H  I  S  F  V  N  *  A  I  R  P  *  F  L  S  E  E  L  F  F  Y  H  S  C  F  N  Y  R  R  R  F  T  I  H  V  M  L  E  L  P  K  A  V  T  A  Y  S  T  R  T  F  *  C  F  K  H  S  T  C  C  E  S  K  Y   : S  S  V  H  W  S  S  A  A  R  N  N  S  *  S  W  N  N  T  P  N  N  Q  C  F </second_frame>
            <third_frame>   F  E  D  Y  Q  L  G  D  K   : G  Q  E  C  G  S  S  F  S  V  S  T  A  Q  G  F  G  L  I  N  N  T  R  P  F  I  S  P  A  L  N  Q  S  T  V  D  Q  P  F  Y  S  H  F  P  S  T  F  T  V  E  R  A  G  V  D  S  L  S  K  N  S  T  S  L  A  Q  Q  A  I  S  H  I  F  P  P  N  P  S  L  L  N  S  C  G  T  R  N  R  V  Q  S  T  A  S  D  V  S  F  S  P  W  N  N  S  N  Q  F  A  P  F  K  P  A  S  S  S  S  T  A  F  T  T  P  L  R  N  P  F  S  L  S  T  S  A  P  L  S  P  C  S  V  S  P  S  T  Y  P  L  L  T  K  P  S  G  H  D  F  Y  Q  K  N  S  F  S  T  T  P  V  L  T  T  G  G  A  S  Q  S  T  L  C  L  N  C  L  K  Q  S  Q  P  T  P  P  G  L  S  N  V  S  S  T  P  L  A  A  N  Q  N  T  :  P  L  F  I  G  P  L  Q  P  E  I  T  P  K  V  G  T  T  L  P  T  T  N  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85990" stop="85963"/>
                    <exon start="85872" stop="85250"/>
                    <exon start="85090" stop="85019"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>723</number_coding_nucleotides>
                  <number_encoded_amino_acids>241</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FEDYQLGDKGQECGSSFSVSTAQGFGLINNTRPFISPALNQSTVDQPFYSHFPSTFTVERAGVDSLSKNSTSLAQQAISHIFPPNPSLLNSCGTRNRVQSTASDVSFSPWNNSNQFAPFKPASSSSTAFTTPLRNPFSLSTSAPLSPCSVSPSTYPLLTKPSGHDFYQKNSFSTTPVLTTGGASQSTLCLNCLKQSQPTPPGLSNVSSTPLAANQNTPLFIGPLQPEITPKVGTTLPTTNA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="89888" PGL_stop="86951"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="89888" e_stop="89837"/>
            <exon e_start="89125" e_stop="88853"/>
            <exon e_start="88673" e_stop="88452"/>
            <exon e_start="87035" e_stop="86951"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.000" e_score="0.981"/>
          <exon-intron don_prob="0.991" acc_prob="0.955" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.409" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.981">
            <gDNA_exon_boundary e_start="89888" e_stop="89837" e_length="52"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.000">
            <gDNA_intron_boundary i_start="89836" i_stop="89126" i_length="711"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="89125" e_stop="88853" e_length="273"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.955">
            <gDNA_intron_boundary i_start="88852" i_stop="88674" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="88673" e_stop="88452" e_length="222"/>
          </exon>
          <intron i_serial="3" don_prob="0.976" acc_prob="0.409">
            <gDNA_intron_boundary i_start="88451" i_stop="87036" i_length="1416"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="87035" e_stop="86951" e_length="85"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89888" stop="89837"/>
              <exon start="89125" stop="88853"/>
              <exon start="88673" stop="88452"/>
              <exon start="87035" stop="86951"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589456" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGTTCTCTTCTTCTCCGTCTCATGTCGATATTTTTTGGAAACACCGCTTCAA : ACTTTAATGCAGCAACGAATGCTACATCTGGTCAAACACAAAACTCATCTACGAATTCGTCTACTTCACCGACATTTGGAAAGAAATATGACTTTAATAGTGTGGCCAATGAACCTTTGGTGGGGTCTAGGGATGTCAATGTCTCGGACTCCTCCATATTTGGATATCCAAGAGCTCCTGCATTTGGTGTTTCAAGCAACTCACACTTTGGCACCGCAAGACTTGATTCATACTCCTTTGGACAACCGGCAGTATCTATGTCAGGGAGCAAAG : GAGAAGAAAGTACACCGCCTTTTTTCATGAGCTCTGGTTTTGGGAAGTCAACATTTGGCATTAATCAGAAAGGAAGTAGAATAGCATCATATATTGCAACTCCAGAGAACGATATCACAGGATTCAGTGGCGGAAAAATTCAATCCATTTGTGGAATGCAGGCTTATAAAGATAAAAGCCAAGAGGAGTTGAGGTTTGAGGACTACCAGTTAGGTGATAAAG : GTGAGGAATGGCATTATATATATGTTACACTTATACTGCTATTTTCATGAAAGGAGGGATATCATATTTACTTTTCTAGAGCGGC</gDNA_template>
            <first_frame> S  S  L  L  L  R  L  M  S  I  F  F  G  N  T  A  S   : N  F  N  A  A  T  N  A  T  S  G  Q  T  Q  N  S  S  T  N  S  S  T  S  P  T  F  G  K  K  Y  D  F  N  S  V  A  N  E  P  L  V  G  S  R  D  V  N  V  S  D  S  S  I  F  G  Y  P  R  A  P  A  F  G  V  S  S  N  S  H  F  G  T  A  R  L  D  S  Y  S  F  G  Q  P  A  V  S  M  S  G  S  K   : G  E  E  S  T  P  P  F  F  M  S  S  G  F  G  K  S  T  F  G  I  N  Q  K  G  S  R  I  A  S  Y  I  A  T  P  E  N  D  I  T  G  F  S  G  G  K  I  Q  S  I  C  G  M  Q  A  Y  K  D  K  S  Q  E  E  L  R  F  E  D  Y  Q  L  G  D  K   : G  E  E  W  H  Y  I  Y  V  T  L  I  L  L  F  S  *  K  E  G  Y  H  I  Y  F  S  R  A   </first_frame>
            <second_frame>  V  L  F  F  S  V  S  C  R  Y  F  L  E  T  P  L  Q  :  T  L  M  Q  Q  R  M  L  H  L  V  K  H  K  T  H  L  R  I  R  L  L  H  R  H  L  E  R  N  M  T  L  I  V  W  P  M  N  L  W  W  G  L  G  M  S  M  S  R  T  P  P  Y  L  D  I  Q  E  L  L  H  L  V  F  Q  A  T  H  T  L  A  P  Q  D  L  I  H  T  P  L  D  N  R  Q  Y  L  C  Q  G  A  K  :  E  K  K  V  H  R  L  F  S  *  A  L  V  L  G  S  Q  H  L  A  L  I  R  K  E  V  E  *  H  H  I  L  Q  L  Q  R  T  I  S  Q  D  S  V  A  E  K  F  N  P  F  V  E  C  R  L  I  K  I  K  A  K  R  S  *  G  L  R  T  T  S  *  V  I  K  :  V  R  N  G  I  I  Y  M  L  H  L  Y  C  Y  F  H  E  R  R  D  I  I  F  T  F  L  E  R  </second_frame>
            <third_frame>   F  S  S  S  P  S  H  V  D  I  F  W  K  H  R  F  K :   L  *  C  S  N  E  C  Y  I  W  S  N  T  K  L  I  Y  E  F  V  Y  F  T  D  I  W  K  E  I  *  L  *  *  C  G  Q  *  T  F  G  G  V  *  G  C  Q  C  L  G  L  L  H  I  W  I  S  K  S  S  C  I  W  C  F  K  Q  L  T  L  W  H  R  K  T  *  F  I  L  L  W  T  T  G  S  I  Y  V  R  E  Q  R :   R  R  K  Y  T  A  F  F  H  E  L  W  F  W  E  V  N  I  W  H  *  S  E  R  K  *  N  S  I  I  Y  C  N  S  R  E  R  Y  H  R  I  Q  W  R  K  N  S  I  H  L  W  N  A  G  L  *  R  *  K  P  R  G  V  E  V  *  G  L  P  V  R  *  *  R :   *  G  M  A  L  Y  I  C  Y  T  Y  T  A  I  F  M  K  G  G  I  S  Y  L  L  F  *  S  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89888" stop="89837"/>
                    <exon start="89125" stop="88853"/>
                    <exon start="88673" stop="88452"/>
                    <exon start="87035" stop="86986"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>594</number_coding_nucleotides>
                  <number_encoded_amino_acids>198</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSLLLRLMSIFFGNTASNFNAATNATSGQTQNSSTNSSTSPTFGKKYDFNSVANEPLVGSRDVNVSDSSIFGYPRAPAFGVSSNSHFGTARLDSYSFGQPAVSMSGSKGEESTPPFFMSSGFGKSTFGINQKGSRIASYIATPENDITGFSGGKIQSICGMQAYKDKSQEELRFEDYQLGDKGEEWHYIYVTLILLFS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="94357" PGL_stop="95615"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="94357" e_stop="94757"/>
            <exon e_start="95110" e_stop="95149"/>
            <exon e_start="95346" e_stop="95615"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.366" acc_prob="0.998" e_score="0.998"/>
          <exon-intron don_prob="0.464" acc_prob="0.804" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="94357" e_stop="94757" e_length="401"/>
          </exon>
          <intron i_serial="1" don_prob="0.366" acc_prob="0.998">
            <gDNA_intron_boundary i_start="94758" i_stop="95109" i_length="352"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="95110" e_stop="95149" e_length="40"/>
          </exon>
          <intron i_serial="2" don_prob="0.464" acc_prob="0.804">
            <gDNA_intron_boundary i_start="95150" i_stop="95345" i_length="196"/>
          </intron>
          <exon e_serial="3" e_score="0.996">
            <gDNA_exon_boundary e_start="95346" e_stop="95615" e_length="270"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94357" stop="94757"/>
              <exon start="95110" stop="95149"/>
              <exon start="95346" stop="95615"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574848" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCGTCATTTACACTCACCGGCAGTTCGGCTCTCAGCTCTCAACTCTCCGATGACAATGTCGATCAAAACCCTTTTAACTCTTCGATGACGATGTCAATCGAAACCACTTAATCGATTTTCCTGTCTTAGTACTTCGGCTCTCAACTCTCCGATGACGATGTCGATCAAAACCCTTTTAACTCTCCGATGACGATGTCCATCGGAATCCCTAAATCGATTTTCCCGGCGATCAATCTATTGGTGTTCTTTCCATTATCTACTAGAGTACTAGAGTAGAATTCTTGTATGCATTCTACCCTTCTTTTTTTACAAAAATCAAGAAGTTGGTATCAAAAGAAGAAACCCTAAACTAATTTTCCCGCGGTTCTTATCTGCTCAAGTAATAGTACTGGTCTTCCCAG : GGAGTCAAAAGATGTACATGCGATGGGGAGTCAAAAGAAG : AATTTGCACGAACGATATCTCAAAGTTTCTTCGTTTATGGGACAAAATGGAAGGACTGCAGTCCAGAGATTACAATTGAGTACCTTAGCTATATCTCAGATATTTTTGTGACTTGTTCTCTATTTTGTTAAGATGATGGAATTTTTTCTTCTCCAATATGAGTTGCAGAGCGGTACTGAACAGAGTATCTGAAGATTTAGGATTACTGTACTCAATGTAACTTTTGCGTCTTGCATATTTTTGGTGATTCATTGGTTCCTTATTCCACTG</gDNA_template>
            <first_frame> P  S  F  T  L  T  G  S  S  A  L  S  S  Q  L  S  D  D  N  V  D  Q  N  P  F  N  S  S  M  T  M  S  I  E  T  T  *  S  I  F  L  S  *  Y  F  G  S  Q  L  S  D  D  D  V  D  Q  N  P  F  N  S  P  M  T  M  S  I  G  I  P  K  S  I  F  P  A  I  N  L  L  V  F  F  P  L  S  T  R  V  L  E  *  N  S  C  M  H  S  T  L  L  F  L  Q  K  S  R  S  W  Y  Q  K  K  K  P  *  T  N  F  P  A  V  L  I  C  S  S  N  S  T  G  L  P  R :   E  S  K  D  V  H  A  M  G  S  Q  K  K  :  N  L  H  E  R  Y  L  K  V  S  S  F  M  G  Q  N  G  R  T  A  V  Q  R  L  Q  L  S  T  L  A  I  S  Q  I  F  L  *  L  V  L  Y  F  V  K  M  M  E  F  F  L  L  Q  Y  E  L  Q  S  G  T  E  Q  S  I  *  R  F  R  I  T  V  L  N  V  T  F  A  S  C  I  F  L  V  I  H  W  F  L  I  P  L </first_frame>
            <second_frame>  R  H  L  H  S  P  A  V  R  L  S  A  L  N  S  P  M  T  M  S  I  K  T  L  L  T  L  R  *  R  C  Q  S  K  P  L  N  R  F  S  C  L  S  T  S  A  L  N  S  P  M  T  M  S  I  K  T  L  L  T  L  R  *  R  C  P  S  E  S  L  N  R  F  S  R  R  S  I  Y  W  C  S  F  H  Y  L  L  E  Y  *  S  R  I  L  V  C  I  L  P  F  F  F  Y  K  N  Q  E  V  G  I  K  R  R  N  P  K  L  I  F  P  R  F  L  S  A  Q  V  I  V  L  V  F  P   : G  S  Q  K  M  Y  M  R  W  G  V  K  R  R :   I  C  T  N  D  I  S  K  F  L  R  L  W  D  K  M  E  G  L  Q  S  R  D  Y  N  *  V  P  *  L  Y  L  R  Y  F  C  D  L  F  S  I  L  L  R  *  W  N  F  F  F  S  N  M  S  C  R  A  V  L  N  R  V  S  E  D  L  G  L  L  Y  S  M  *  L  L  R  L  A  Y  F  W  *  F  I  G  S  L  F  H   </second_frame>
            <third_frame>   V  I  Y  T  H  R  Q  F  G  S  Q  L  S  T  L  R  *  Q  C  R  S  K  P  F  *  L  F  D  D  D  V  N  R  N  H  L  I  D  F  P  V  L  V  L  R  L  S  T  L  R  *  R  C  R  S  K  P  F  *  L  S  D  D  D  V  H  R  N  P  *  I  D  F  P  G  D  Q  S  I  G  V  L  S  I  I  Y  *  S  T  R  V  E  F  L  Y  A  F  Y  P  S  F  F  T  K  I  K  K  L  V  S  K  E  E  T  L  N  *  F  S  R  G  S  Y  L  L  K  *  *  Y  W  S  S  Q  :  G  V  K  R  C  T  C  D  G  E  S  K  E   : E  F  A  R  T  I  S  Q  S  F  F  V  Y  G  T  K  W  K  D  C  S  P  E  I  T  I  E  Y  L  S  Y  I  S  D  I  F  V  T  C  S  L  F  C  *  D  D  G  I  F  S  S  P  I  *  V  A  E  R  Y  *  T  E  Y  L  K  I  *  D  Y  C  T  Q  C  N  F  C  V  L  H  I  F  G  D  S  L  V  P  Y  S  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94628" stop="94757"/>
                    <exon start="95110" stop="95149"/>
                    <exon start="95346" stop="95424"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SRILVCILPFFFYKNQEVGIKRRNPKLIFPRFLSAQVIVLVFPGSQKMYMRWGVKRRICTNDISKFLRLWDKMEGLQSRDYN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94705" stop="94757"/>
                    <exon start="95110" stop="95149"/>
                    <exon start="95346" stop="95456"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TNFPAVLICSSNSTGLPRESKDVHAMGSQKKNLHERYLKVSSFMGQNGRTAVQRLQLSTLAISQIFL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="95917" PGL_stop="97526"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="95917" e_stop="95975"/>
            <exon e_start="96075" e_stop="96172"/>
            <exon e_start="96595" e_stop="96787"/>
            <exon e_start="96989" e_stop="97044"/>
            <exon e_start="97159" e_stop="97251"/>
            <exon e_start="97331" e_stop="97526"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.714" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.438" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.759" e_score="1.000"/>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="95917" e_stop="95975" e_length="59"/>
          </exon>
          <intron i_serial="1" don_prob="0.714" acc_prob="0.993">
            <gDNA_intron_boundary i_start="95976" i_stop="96074" i_length="99"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="96075" e_stop="96172" e_length="98"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.438">
            <gDNA_intron_boundary i_start="96173" i_stop="96594" i_length="422"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="96595" e_stop="96787" e_length="193"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.000">
            <gDNA_intron_boundary i_start="96788" i_stop="96988" i_length="201"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="96989" e_stop="97044" e_length="56"/>
          </exon>
          <intron i_serial="4" don_prob="0.972" acc_prob="0.964">
            <gDNA_intron_boundary i_start="97045" i_stop="97158" i_length="114"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="97159" e_stop="97251" e_length="93"/>
          </exon>
          <intron i_serial="5" don_prob="0.957" acc_prob="0.759">
            <gDNA_intron_boundary i_start="97252" i_stop="97330" i_length="79"/>
          </intron>
          <exon e_serial="6" e_score="0.985">
            <gDNA_exon_boundary e_start="97331" e_stop="97526" e_length="196"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95917" stop="95975"/>
              <exon start="96075" stop="96172"/>
              <exon start="96595" stop="96787"/>
              <exon start="96989" stop="97044"/>
              <exon start="97159" stop="97251"/>
              <exon start="97331" stop="97526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U579334" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATAAGTATGATCAATCTTCCACCCCAAGTTGTGGGGACGGTGTATTTTTCTGTTGAAAG : GCCAAATGTGAAAAGGAAACTTGTTAACATCTGGAATAGCAAATTAGAAGCTCAAGGGGGGACATGCACAGGTCCACACGATGGGCAGTCAAAAGAAG : AGCGGTACTGGAAGAGGAACAGATAATCTTAAGAATCAGGATACTATACTGAGTGTCACTTCTGGCGTGTTGCATTTCATTGGTTCCTGATACCATTGATAAAAACTGCATTAAGGGTGCCAAAGTTCTCGAACAGGTTGATAAGAAGTTTATTCCCATTGTGGCAAGCACAACACCTGCTATAATTGATCAG : GATTTTTCTCTTTGCAGTCATTGTTGGTGATGTATTTTATAACGAACCAGTTCGAA : CCAAAAGAAGGTCTTGCATTCTCTGGAAGAGACTCTGCTGAGAATCACCCTTGTGCAATCCAGTGTCTCCTTCAAAATTGCTGATATTGAAAG : TGAGGATGACGTGCTTTGCACATGTACCTCTCATTCTCCATTGCCAAAATTGTCCAGTGGGTTTGGGATTCAACTGACCTCCCTTAACAAATTGAATGCAAGTGATGGTTCATTCAAGCTCTCAGGATACATTTCAGGTCCTGATTTTTACGCAATGAGCGTATAAAGGCCCAAATTGATGGATAAGAGATTTGAT</gDNA_template>
            <first_frame> I  S  M  I  N  L  P  P  Q  V  V  G  T  V  Y  F  S  V  E  R :   P  N  V  K  R  K  L  V  N  I  W  N  S  K  L  E  A  Q  G  G  T  C  T  G  P  H  D  G  Q  S  K  E   : E  R  Y  W  K  R  N  R  *  S  *  E  S  G  Y  Y  T  E  C  H  F  W  R  V  A  F  H  W  F  L  I  P  L  I  K  T  A  L  R  V  P  K  F  S  N  R  L  I  R  S  L  F  P  L  W  Q  A  Q  H  L  L  *  L  I  R :   I  F  L  F  A  V  I  V  G  D  V  F  Y  N  E  P  V  R   : T  K  R  R  S  C  I  L  W  K  R  L  C  *  E  S  P  L  C  N  P  V  S  P  S  K  L  L  I  L  K   : V  R  M  T  C  F  A  H  V  P  L  I  L  H  C  Q  N  C  P  V  G  L  G  F  N  *  P  P  L  T  N  *  M  Q  V  M  V  H  S  S  S  Q  D  T  F  Q  V  L  I  F  T  Q  *  A  Y  K  G  P  N  *  W  I  R  D  L   </first_frame>
            <second_frame>  *  V  *  S  I  F  H  P  K  L  W  G  R  C  I  F  L  L  K   : G  Q  M  *  K  G  N  L  L  T  S  G  I  A  N  *  K  L  K  G  G  H  A  Q  V  H  T  M  G  S  Q  K  K  :  S  G  T  G  R  G  T  D  N  L  K  N  Q  D  T  I  L  S  V  T  S  G  V  L  H  F  I  G  S  *  Y  H  *  *  K  L  H  *  G  C  Q  S  S  R  T  G  *  *  E  V  Y  S  H  C  G  K  H  N  T  C  Y  N  *  S   : G  F  F  S  L  Q  S  L  L  V  M  Y  F  I  T  N  Q  F  E  :  P  K  E  G  L  A  F  S  G  R  D  S  A  E  N  H  P  C  A  I  Q  C  L  L  Q  N  C  *  Y  *  K  :  *  G  *  R  A  L  H  M  Y  L  S  F  S  I  A  K  I  V  Q  W  V  W  D  S  T  D  L  P  *  Q  I  E  C  K  *  W  F  I  Q  A  L  R  I  H  F  R  S  *  F  L  R  N  E  R  I  K  A  Q  I  D  G  *  E  I  *  </second_frame>
            <third_frame>   K  Y  D  Q  S  S  T  P  S  C  G  D  G  V  F  F  C  *  K  :  A  K  C  E  K  E  T  C  *  H  L  E  *  Q  I  R  S  S  R  G  D  M  H  R  S  T  R  W  A  V  K  R  R :   A  V  L  E  E  E  Q  I  I  L  R  I  R  I  L  Y  *  V  S  L  L  A  C  C  I  S  L  V  P  D  T  I  D  K  N  C  I  K  G  A  K  V  L  E  Q  V  D  K  K  F  I  P  I  V  A  S  T  T  P  A  I  I  D  Q  :  D  F  S  L  C  S  H  C  W  *  C  I  L  *  R  T  S  S  N :   Q  K  K  V  L  H  S  L  E  E  T  L  L  R  I  T  L  V  Q  S  S  V  S  F  K  I  A  D  I  E  S :   E  D  D  V  L  C  T  C  T  S  H  S  P  L  P  K  L  S  S  G  F  G  I  Q  L  T  S  L  N  K  L  N  A  S  D  G  S  F  K  L  S  G  Y  I  S  G  P  D  F  Y  A  M  S  V  *  R  P  K  L  M  D  K  R  F  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97031" stop="97044"/>
                    <exon start="97159" stop="97251"/>
                    <exon start="97331" stop="97496"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RTSSNQKKVLHSLEETLLRITLVQSSVSFKIADIESEDDVLCTCTSHSPLPKLSSGFGIQLTSLNKLNASDGSFKLSGYISGPDFYAMSV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="98322" PGL_stop="99568"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="98322" e_stop="98407"/>
            <exon e_start="98498" e_stop="98551"/>
            <exon e_start="98905" e_stop="99568"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.595" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.930" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="98322" e_stop="98407" e_length="86"/>
          </exon>
          <intron i_serial="1" don_prob="0.595" acc_prob="0.987">
            <gDNA_intron_boundary i_start="98408" i_stop="98497" i_length="90"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="98498" e_stop="98551" e_length="54"/>
          </exon>
          <intron i_serial="2" don_prob="0.930" acc_prob="0.000">
            <gDNA_intron_boundary i_start="98552" i_stop="98904" i_length="353"/>
          </intron>
          <exon e_serial="3" e_score="0.998">
            <gDNA_exon_boundary e_start="98905" e_stop="99568" e_length="664"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98322" stop="98407"/>
              <exon start="98498" stop="98551"/>
              <exon start="98905" stop="99568"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585148" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98988" stop="99558"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595208" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CACTGGTTCATTTTTTTTCCATGTGAGATTTGCAATCAAATTGGCTGAAATGATGTGTAGCATTTTACTCTCTGTTGGCACCATTG : GATTGGCACCTCGTCCTTCTCTTTATTGAGGATCCTGTCACGAATCTCTGGACT : ATATTCTTGAGATCAGTGAAGGCAGGTATAGAGCTCAGAGTTGCAAAGCTACACTTGAACTTCTTTCCCCACTGCCAAAGAAACTGACTGGAGAGTGCTCTGTCAGAGAGATATTCAATCTTCTTCTGATATTCTGTGGGGAAGTGCTCTGGGTCCAGATTCCTCTGTCAGATTGAAAGTTTTCAAGTCAGTCAATCATGGATCTCTTGCTCATTGCACAGCCGGTGTAAACTGGAGATCTGTTGATGATGGAACATCTTTTGATATTGATGAAGATATATTAAGTTTGAAAAAGTGACTAGAGTACTAAACAAAGTTGCCTTGGAGATGGTGTTGAACATAAAGCAGTTGATAATATTTACCAGATACTATATCAAAAGATTTTGAAAATTATCCAGGTGCAAAACTAAGGCATTGCAGAAGTCAAAAATTTTGTCAAGATATCCAGAAAAATCTTCATTGACCAAGGACATCTTATGGATCATAAATAGTAGTTGGAGTAGTTCATTCCGAATTTTTCATATTTATAATTTTGACAATACTCCGGTAAGTTTTTTAGTCTTATTCGATAACCATAGCATACTATAACAGGATTTCTACTTTGTAATTTTATTACTACGAATATTTATTTTGTGAAATAAGTTGTTTGGACCGATTTTTAAGC</gDNA_template>
            <first_frame> H  W  F  I  F  F  P  C  E  I  C  N  Q  I  G  *  N  D  V  *  H  F  T  L  C  W  H  H  W :   I  G  T  S  S  F  S  L  L  R  I  L  S  R  I  S  G  L :   Y  S  *  D  Q  *  R  Q  V  *  S  S  E  L  Q  S  Y  T  *  T  S  F  P  T  A  K  E  T  D  W  R  V  L  C  Q  R  D  I  Q  S  S  S  D  I  L  W  G  S  A  L  G  P  D  S  S  V  R  L  K  V  F  K  S  V  N  H  G  S  L  A  H  C  T  A  G  V  N  W  R  S  V  D  D  G  T  S  F  D  I  D  E  D  I  L  S  L  K  K  *  L  E  Y  *  T  K  L  P  W  R  W  C  *  T  *  S  S  *  *  Y  L  P  D  T  I  S  K  D  F  E  N  Y  P  G  A  K  L  R  H  C  R  S  Q  K  F  C  Q  D  I  Q  K  N  L  H  *  P  R  T  S  Y  G  S  *  I  V  V  G  V  V  H  S  E  F  F  I  F  I  I  L  T  I  L  R  *  V  F  *  S  Y  S  I  T  I  A  Y  Y  N  R  I  S  T  L  *  F  Y  Y  Y  E  Y  L  F  C  E  I  S  C  L  D  R  F  L  S </first_frame>
            <second_frame>  T  G  S  F  F  F  H  V  R  F  A  I  K  L  A  E  M  M  C  S  I  L  L  S  V  G  T  I   : G  L  A  P  R  P  S  L  Y  *  G  S  C  H  E  S  L  D   : Y  I  L  E  I  S  E  G  R  Y  R  A  Q  S  C  K  A  T  L  E  L  L  S  P  L  P  K  K  L  T  G  E  C  S  V  R  E  I  F  N  L  L  L  I  F  C  G  E  V  L  W  V  Q  I  P  L  S  D  *  K  F  S  S  Q  S  I  M  D  L  L  L  I  A  Q  P  V  *  T  G  D  L  L  M  M  E  H  L  L  I  L  M  K  I  Y  *  V  *  K  S  D  *  S  T  K  Q  S  C  L  G  D  G  V  E  H  K  A  V  D  N  I  Y  Q  I  L  Y  Q  K  I  L  K  I  I  Q  V  Q  N  *  G  I  A  E  V  K  N  F  V  K  I  S  R  K  I  F  I  D  Q  G  H  L  M  D  H  K  *  *  L  E  *  F  I  P  N  F  S  Y  L  *  F  *  Q  Y  S  G  K  F  F  S  L  I  R  *  P  *  H  T  I  T  G  F  L  L  C  N  F  I  T  T  N  I  Y  F  V  K  *  V  V  W  T  D  F  *   </second_frame>
            <third_frame>   L  V  H  F  F  S  M  *  D  L  Q  S  N  W  L  K  *  C  V  A  F  Y  S  L  L  A  P  L  :  D  W  H  L  V  L  L  F  I  E  D  P  V  T  N  L  W  T  :  I  F  L  R  S  V  K  A  G  I  E  L  R  V  A  K  L  H  L  N  F  F  P  H  C  Q  R  N  *  L  E  S  A  L  S  E  R  Y  S  I  F  F  *  Y  S  V  G  K  C  S  G  S  R  F  L  C  Q  I  E  S  F  Q  V  S  Q  S  W  I  S  C  S  L  H  S  R  C  K  L  E  I  C  *  *  W  N  I  F  *  Y  *  *  R  Y  I  K  F  E  K  V  T  R  V  L  N  K  V  A  L  E  M  V  L  N  I  K  Q  L  I  I  F  T  R  Y  Y  I  K  R  F  *  K  L  S  R  C  K  T  K  A  L  Q  K  S  K  I  L  S  R  Y  P  E  K  S  S  L  T  K  D  I  L  W  I  I  N  S  S  W  S  S  S  F  R  I  F  H  I  Y  N  F  D  N  T  P  V  S  F  L  V  L  F  D  N  H  S  I  L  *  Q  D  F  Y  F  V  I  L  L  L  R  I  F  I  L  *  N  K  L  F  G  P  I  F  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="98963" stop="99202"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSFPTAKETDWRVLCQRDIQSSSDILWGSALGPDSSVRLKVFKSVNHGSLAHCTAGVNWRSVDDGTSFDIDEDILSLKK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="98527" stop="98551"/>
                    <exon start="98905" stop="99080"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSCHESLDYILEISEGRYRAQSCKATLELLSPLPKKLTGECSVREIFNLLLIFCGEVLWVQIPLSD*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="99292" stop="99492"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLSRCKTKALQKSKILSRYPEKSSLTKDILWIINSSWSSSFRIFHIYNFDNTPVSFLVLFDNHSIL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="100271" PGL_stop="102532"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="100271" e_stop="100302"/>
            <exon e_start="100407" e_stop="100487"/>
            <exon e_start="100597" e_stop="100716"/>
            <exon e_start="100817" e_stop="100954"/>
            <exon e_start="101569" e_stop="101667"/>
            <exon e_start="101776" e_stop="102079"/>
            <exon e_start="102446" e_stop="102532"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.989" e_score="0.938"/>
          <exon-intron don_prob="0.956" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="0.609" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.809" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.938">
            <gDNA_exon_boundary e_start="100271" e_stop="100302" e_length="32"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.989">
            <gDNA_intron_boundary i_start="100303" i_stop="100406" i_length="104"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="100407" e_stop="100487" e_length="81"/>
          </exon>
          <intron i_serial="2" don_prob="0.956" acc_prob="0.993">
            <gDNA_intron_boundary i_start="100488" i_stop="100596" i_length="109"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="100597" e_stop="100716" e_length="120"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="100717" i_stop="100816" i_length="100"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="100817" e_stop="100954" e_length="138"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.966">
            <gDNA_intron_boundary i_start="100955" i_stop="101568" i_length="614"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="101569" e_stop="101667" e_length="99"/>
          </exon>
          <intron i_serial="5" don_prob="0.609" acc_prob="0.977">
            <gDNA_intron_boundary i_start="101668" i_stop="101775" i_length="108"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="101776" e_stop="102079" e_length="304"/>
          </exon>
          <intron i_serial="6" don_prob="0.809" acc_prob="0.999">
            <gDNA_intron_boundary i_start="102080" i_stop="102445" i_length="366"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="102446" e_stop="102532" e_length="87"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100271" stop="100302"/>
              <exon start="100407" stop="100487"/>
              <exon start="100597" stop="100716"/>
              <exon start="100817" stop="100954"/>
              <exon start="101569" stop="101667"/>
              <exon start="101776" stop="102079"/>
              <exon start="102446" stop="102532"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575440" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGAGAAGAACCTCAGAGCCTACATGATGAAG : GAGATCATCCGTCTACCTATGAAGTTTCTTATTCTCTGTATCACCGTTTCTATCTTATTCCAACATTGTTCTTGCCTAAAG : ATTGGAGAAACTTGTACCGACAGTAATTGTGATGAAGGATTAGTATGCTCTACTTGTCCTGCTAATGGCAATACCCGACCCAGATGTACTCGCATTCAACCCACTATTCCTACCACCAAG : GTAAAAGGTTTGCCATTCAACAAGTATTCGTGGCTGACGACCCACAACTCCTTTGCAATTTCCGGGTCAACATCTGCAACTGGGTCTGATATTCTTGCTCCGACCAACCAGGAAGATTCCATTACTAATCAGCTCAAG : AATGGCGTTCGAGGACTTATGCTTGATATGTATGATTTCAACAATGACATCTGGCTTTGTCACTCATTTGGTGGGAAGTGTTACAATGTTACATCATTT : CAACCTGCAATCAATTCACTGAAAGAAATTCAAGGGTTCCTCGAAAAGAACCCATCAGAGGTCGTCACAATCTTCATTGAAGACTATGTCTCAACCCCAAAGGCCTTGAGCAAGGTTTTTAATGATTCTGGTCTTAATAAGTACTGGTTTCCAATTTCTCGTATGCCCAAAAAAGGAGAAGATTGGCCTACAGTGGATGACATGGTCAAGCAGAATCAACGTCTTGTAGTCTTCACCTCTAAATCATCAAAGGAGGCTTCTGATGGCATTGCTTATGAGTGGAGATACGTTGTAGAAAACCAAT : ATGGAAATGACGGGATGAAAGAAGGTTCTTGTCCAAGTCGTTCTGAATCATCTGCTTTGAGTACATCGGGAATCTCTTTGGTTCTGC</gDNA_template>
            <first_frame> E  R  R  T  S  E  P  T  *  *  R :   R  S  S  V  Y  L  *  S  F  L  F  S  V  S  P  F  L  S  Y  S  N  I  V  L  A  *  R :   L  E  K  L  V  P  T  V  I  V  M  K  D  *  Y  A  L  L  V  L  L  M  A  I  P  D  P  D  V  L  A  F  N  P  L  F  L  P  P  R :   *  K  V  C  H  S  T  S  I  R  G  *  R  P  T  T  P  L  Q  F  P  G  Q  H  L  Q  L  G  L  I  F  L  L  R  P  T  R  K  I  P  L  L  I  S  S  R :   M  A  F  E  D  L  C  L  I  C  M  I  S  T  M  T  S  G  F  V  T  H  L  V  G  S  V  T  M  L  H  H  F :   N  L  Q  S  I  H  *  K  K  F  K  G  S  S  K  R  T  H  Q  R  S  S  Q  S  S  L  K  T  M  S  Q  P  Q  R  P  *  A  R  F  L  M  I  L  V  L  I  S  T  G  F  Q  F  L  V  C  P  K  K  E  K  I  G  L  Q  W  M  T  W  S  S  R  I  N  V  L  *  S  S  P  L  N  H  Q  R  R  L  L  M  A  L  L  M  S  G  D  T  L  *  K  T  N  :  M  E  M  T  G  *  K  K  V  L  V  Q  V  V  L  N  H  L  L  *  V  H  R  E  S  L  W  F  C </first_frame>
            <second_frame>  R  E  E  P  Q  S  L  H  D  E   : G  D  H  P  S  T  Y  E  V  S  Y  S  L  Y  H  R  F  Y  L  I  P  T  L  F  L  P  K   : D  W  R  N  L  Y  R  Q  *  L  *  *  R  I  S  M  L  Y  L  S  C  *  W  Q  Y  P  T  Q  M  Y  S  H  S  T  H  Y  S  Y  H  Q   : G  K  R  F  A  I  Q  Q  V  F  V  A  D  D  P  Q  L  L  C  N  F  R  V  N  I  C  N  W  V  *  Y  S  C  S  D  Q  P  G  R  F  H  Y  *  S  A  Q   : E  W  R  S  R  T  Y  A  *  Y  V  *  F  Q  Q  *  H  L  A  L  S  L  I  W  W  E  V  L  Q  C  Y  I  I   : S  T  C  N  Q  F  T  E  R  N  S  R  V  P  R  K  E  P  I  R  G  R  H  N  L  H  *  R  L  C  L  N  P  K  G  L  E  Q  G  F  *  *  F  W  S  *  *  V  L  V  S  N  F  S  Y  A  Q  K  R  R  R  L  A  Y  S  G  *  H  G  Q  A  E  S  T  S  C  S  L  H  L  *  I  I  K  G  G  F  *  W  H  C  L  *  V  E  I  R  C  R  K  P  I :   W  K  *  R  D  E  R  R  F  L  S  K  S  F  *  I  I  C  F  E  Y  I  G  N  L  F  G  S   </second_frame>
            <third_frame>   E  K  N  L  R  A  Y  M  M  K  :  E  I  I  R  L  P  M  K  F  L  I  L  C  I  T  V  S  I  L  F  Q  H  C  S  C  L  K  :  I  G  E  T  C  T  D  S  N  C  D  E  G  L  V  C  S  T  C  P  A  N  G  N  T  R  P  R  C  T  R  I  Q  P  T  I  P  T  T  K  :  V  K  G  L  P  F  N  K  Y  S  W  L  T  T  H  N  S  F  A  I  S  G  S  T  S  A  T  G  S  D  I  L  A  P  T  N  Q  E  D  S  I  T  N  Q  L  K  :  N  G  V  R  G  L  M  L  D  M  Y  D  F  N  N  D  I  W  L  C  H  S  F  G  G  K  C  Y  N  V  T  S  F  :  Q  P  A  I  N  S  L  K  E  I  Q  G  F  L  E  K  N  P  S  E  V  V  T  I  F  I  E  D  Y  V  S  T  P  K  A  L  S  K  V  F  N  D  S  G  L  N  K  Y  W  F  P  I  S  R  M  P  K  K  G  E  D  W  P  T  V  D  D  M  V  K  Q  N  Q  R  L  V  V  F  T  S  K  S  S  K  E  A  S  D  G  I  A  Y  E  W  R  Y  V  V  E  N  Q   : Y  G  N  D  G  M  K  E  G  S  C  P  S  R  S  E  S  S  A  L  S  T  S  G  I  S  L  V  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="+"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100273" stop="100302"/>
                    <exon start="100407" stop="100487"/>
                    <exon start="100597" stop="100716"/>
                    <exon start="100817" stop="100954"/>
                    <exon start="101569" stop="101667"/>
                    <exon start="101776" stop="102079"/>
                    <exon start="102446" stop="102531"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>858</number_coding_nucleotides>
                  <number_encoded_amino_acids>286</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKNLRAYMMKEIIRLPMKFLILCITVSILFQHCSCLKIGETCTDSNCDEGLVCSTCPANGNTRPRCTRIQPTIPTTKVKGLPFNKYSWLTTHNSFAISGSTSATGSDILAPTNQEDSITNQLKNGVRGLMLDMYDFNNDIWLCHSFGGKCYNVTSFQPAINSLKEIQGFLEKNPSEVVTIFIEDYVSTPKALSKVFNDSGLNKYWFPISRMPKKGEDWPTVDDMVKQNQRLVVFTSKSSKEASDGIAYEWRYVVENQYGNDGMKEGSCPSRSESSALSTSGISLVL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="114508" PGL_stop="117351"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="114508" e_stop="114532"/>
            <exon e_start="114625" e_stop="114670"/>
            <exon e_start="115177" e_stop="115290"/>
            <exon e_start="115373" e_stop="115456"/>
            <exon e_start="115554" e_stop="115667"/>
            <exon e_start="115778" e_stop="115867"/>
            <exon e_start="115952" e_stop="116028"/>
            <exon e_start="116336" e_stop="116552"/>
            <exon e_start="117100" e_stop="117153"/>
            <exon e_start="117238" e_stop="117351"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.877" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.951" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.864" acc_prob="0.181" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.947" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.829" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.863" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="114508" e_stop="114532" e_length="25"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.998">
            <gDNA_intron_boundary i_start="114533" i_stop="114624" i_length="92"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="114625" e_stop="114670" e_length="46"/>
          </exon>
          <intron i_serial="2" don_prob="0.877" acc_prob="1.000">
            <gDNA_intron_boundary i_start="114671" i_stop="115176" i_length="506"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="115177" e_stop="115290" e_length="114"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.951">
            <gDNA_intron_boundary i_start="115291" i_stop="115372" i_length="82"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="115373" e_stop="115456" e_length="84"/>
          </exon>
          <intron i_serial="4" don_prob="0.976" acc_prob="0.998">
            <gDNA_intron_boundary i_start="115457" i_stop="115553" i_length="97"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="115554" e_stop="115667" e_length="114"/>
          </exon>
          <intron i_serial="5" don_prob="0.864" acc_prob="0.181">
            <gDNA_intron_boundary i_start="115668" i_stop="115777" i_length="110"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="115778" e_stop="115867" e_length="90"/>
          </exon>
          <intron i_serial="6" don_prob="0.995" acc_prob="0.947">
            <gDNA_intron_boundary i_start="115868" i_stop="115951" i_length="84"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="115952" e_stop="116028" e_length="77"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.954">
            <gDNA_intron_boundary i_start="116029" i_stop="116335" i_length="307"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="116336" e_stop="116552" e_length="217"/>
          </exon>
          <intron i_serial="8" don_prob="1.000" acc_prob="0.829">
            <gDNA_intron_boundary i_start="116553" i_stop="117099" i_length="547"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="117100" e_stop="117153" e_length="54"/>
          </exon>
          <intron i_serial="9" don_prob="0.000" acc_prob="0.863">
            <gDNA_intron_boundary i_start="117154" i_stop="117237" i_length="84"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="117238" e_stop="117351" e_length="114"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114508" stop="114532"/>
              <exon start="114625" stop="114670"/>
              <exon start="115177" stop="115290"/>
              <exon start="115373" stop="115456"/>
              <exon start="115554" stop="115667"/>
              <exon start="115778" stop="115867"/>
              <exon start="115952" stop="116028"/>
              <exon start="116336" stop="116552"/>
              <exon start="117100" stop="117153"/>
              <exon start="117238" stop="117351"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585459" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCCTTAGCCAAATACTGTCCGGCGG : GTCCTGTGAAGATGTCATTGAATCAATACATAATGCACTTATGAAG : GTACAAGAGCAAATGAGGACTGGCCAAATTGAGCTGGAAAAATACGTGATCACCAAATCATTGACTAAACCTCCTGAAGCCTATCCTGATGCTAAAAGTCAACCTCACGTTGAA : GTAGCACTCAGGTTGAAGAAAAGTGGCTATGTTACTGGTTGCTCTGCTGGTGATACAGTACCATATGTCATCTGTTGTGAACAG : GGTAATGGTTCAACTACCTCTGTGGGAATTGCTCAGCGGGCAAGACATCCTGATGAACTGAAAAGAGACAATGGAAACTGGATAGTAGACATTGATTATTACCTTGCCCAACAG : ATACATCCTGTAATATCCCGTCTATGTGCGTCAATTCAGGGTACTAGCCCAGCACGTCTGGCTGATTGCTTAGGACTAGATTCATCCAAG : TTCCAAAATAAATCAAGTGAAGCTGTCAATGATGATCCCTCAAATGCACTTTTATGTGTAGCTGATGATGAAGAGAG : ATTTCGGGGTTGTGAGCCTTTGACTTTGACATGCCCCAGCTGCTCCTGCTCTTTTGAGTGTGCACCTATATTTAGTTCCATATGTTCATCAATTAGGCAAAATCCAGCAGACTTGCAAGTAGGAGAGTCTGCCAGCAAAGTCTGGGAAAGATTTAGTTGTCCCAAATGCCCAGAGGAGAGTGAGGGGAATATATCTTCGGCATTGATAGCAAACCAG : GTTAAAAGGCAAGTAGAAGGCTTTATTTCAACATATTACAAAGGAGTTATGATG : TGCGATGATGAAACCTGCAACTACACCACTCGTAGCCTGAACCTGCGAGTAATTGGGGACTCAGAGAGAGGAACTGTTTGTCCAAATTATCCTCGTTGTAATGGACACTTACTA</gDNA_template>
            <first_frame> A  L  A  K  Y  C  P  A   : G  P  V  K  M  S  L  N  Q  Y  I  M  H  L  *  R :   Y  K  S  K  *  G  L  A  K  L  S  W  K  N  T  *  S  P  N  H  *  L  N  L  L  K  P  I  L  M  L  K  V  N  L  T  L  K :   *  H  S  G  *  R  K  V  A  M  L  L  V  A  L  L  V  I  Q  Y  H  M  S  S  V  V  N  R :   V  M  V  Q  L  P  L  W  E  L  L  S  G  Q  D  I  L  M  N  *  K  E  T  M  E  T  G  *  *  T  L  I  I  T  L  P  N  R :   Y  I  L  *  Y  P  V  Y  V  R  Q  F  R  V  L  A  Q  H  V  W  L  I  A  *  D  *  I  H  P  S :   S  K  I  N  Q  V  K  L  S  M  M  I  P  Q  M  H  F  Y  V  *  L  M  M  K  R   : D  F  G  V  V  S  L  *  L  *  H  A  P  A  A  P  A  L  L  S  V  H  L  Y  L  V  P  Y  V  H  Q  L  G  K  I  Q  Q  T  C  K  *  E  S  L  P  A  K  S  G  K  D  L  V  V  P  N  A  Q  R  R  V  R  G  I  Y  L  R  H  *  *  Q  T  R :   L  K  G  K  *  K  A  L  F  Q  H  I  T  K  E  L  *  C :   A  M  M  K  P  A  T  T  P  L  V  A  *  T  C  E  *  L  G  T  Q  R  E  E  L  F  V  Q  I  I  L  V  V  M  D  T  Y   </first_frame>
            <second_frame>  P  *  P  N  T  V  R  R  :  V  L  *  R  C  H  *  I  N  T  *  C  T  Y  E   : G  T  R  A  N  E  D  W  P  N  *  A  G  K  I  R  D  H  Q  I  I  D  *  T  S  *  S  L  S  *  C  *  K  S  T  S  R  *   : S  S  T  Q  V  E  E  K  W  L  C  Y  W  L  L  C  W  *  Y  S  T  I  C  H  L  L  *  T   : G  *  W  F  N  Y  L  C  G  N  C  S  A  G  K  T  S  *  *  T  E  K  R  Q  W  K  L  D  S  R  H  *  L  L  P  C  P  T   : D  T  S  C  N  I  P  S  M  C  V  N  S  G  Y  *  P  S  T  S  G  *  L  L  R  T  R  F  I  Q   : V  P  K  *  I  K  *  S  C  Q  *  *  S  L  K  C  T  F  M  C  S  *  *  *  R  E  :  I  S  G  L  *  A  F  D  F  D  M  P  Q  L  L  L  L  F  *  V  C  T  Y  I  *  F  H  M  F  I  N  *  A  K  S  S  R  L  A  S  R  R  V  C  Q  Q  S  L  G  K  I  *  L  S  Q  M  P  R  G  E  *  G  E  Y  I  F  G  I  D  S  K  P   : G  *  K  A  S  R  R  L  Y  F  N  I  L  Q  R  S  Y  D   : V  R  *  *  N  L  Q  L  H  H  S  *  P  E  P  A  S  N  W  G  L  R  E  R  N  C  L  S  K  L  S  S  L  *  W  T  L  T  </second_frame>
            <third_frame>   L  S  Q  I  L  S  G  G :   S  C  E  D  V  I  E  S  I  H  N  A  L  M  K  :  V  Q  E  Q  M  R  T  G  Q  I  E  L  E  K  Y  V  I  T  K  S  L  T  K  P  P  E  A  Y  P  D  A  K  S  Q  P  H  V  E  :  V  A  L  R  L  K  K  S  G  Y  V  T  G  C  S  A  G  D  T  V  P  Y  V  I  C  C  E  Q  :  G  N  G  S  T  T  S  V  G  I  A  Q  R  A  R  H  P  D  E  L  K  R  D  N  G  N  W  I  V  D  I  D  Y  Y  L  A  Q  Q  :  I  H  P  V  I  S  R  L  C  A  S  I  Q  G  T  S  P  A  R  L  A  D  C  L  G  L  D  S  S  K  :  F  Q  N  K  S  S  E  A  V  N  D  D  P  S  N  A  L  L  C  V  A  D  D  E  E  R :   F  R  G  C  E  P  L  T  L  T  C  P  S  C  S  C  S  F  E  C  A  P  I  F  S  S  I  C  S  S  I  R  Q  N  P  A  D  L  Q  V  G  E  S  A  S  K  V  W  E  R  F  S  C  P  K  C  P  E  E  S  E  G  N  I  S  S  A  L  I  A  N  Q  :  V  K  R  Q  V  E  G  F  I  S  T  Y  Y  K  G  V  M  M  :  C  D  D  E  T  C  N  Y  T  T  R  S  L  N  L  R  V  I  G  D  S  E  R  G  T  V  C  P  N  Y  P  R  C  N  G  H  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="114510" stop="114532"/>
                    <exon start="114625" stop="114670"/>
                    <exon start="115177" stop="115290"/>
                    <exon start="115373" stop="115456"/>
                    <exon start="115554" stop="115667"/>
                    <exon start="115778" stop="115867"/>
                    <exon start="115952" stop="116028"/>
                    <exon start="116336" stop="116552"/>
                    <exon start="117100" stop="117153"/>
                    <exon start="117238" stop="117351"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>933</number_coding_nucleotides>
                  <number_encoded_amino_acids>311</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSQILSGGSCEDVIESIHNALMKVQEQMRTGQIELEKYVITKSLTKPPEAYPDAKSQPHVEVALRLKKSGYVTGCSAGDTVPYVICCEQGNGSTTSVGIAQRARHPDELKRDNGNWIVDIDYYLAQQIHPVISRLCASIQGTSPARLADCLGLDSSKFQNKSSEAVNDDPSNALLCVADDEERFRGCEPLTLTCPSCSCSFECAPIFSSICSSIRQNPADLQVGESASKVWERFSCPKCPEESEGNISSALIANQVKRQVEGFISTYYKGVMMCDDETCNYTTRSLNLRVIGDSERGTVCPNYPRCNGHLL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="-" PGL_start="125858" PGL_stop="117840"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="125858" e_stop="125623"/>
            <exon e_start="125510" e_stop="125363"/>
            <exon e_start="124487" e_stop="124368"/>
            <exon e_start="124247" e_stop="124113"/>
            <exon e_start="124032" e_stop="123971"/>
            <exon e_start="123623" e_stop="123548"/>
            <exon e_start="122656" e_stop="122555"/>
            <exon e_start="121694" e_stop="121578"/>
            <exon e_start="121274" e_stop="121216"/>
            <exon e_start="120187" e_stop="120013"/>
            <exon e_start="119423" e_stop="119289"/>
            <exon e_start="119217" e_stop="119119"/>
            <exon e_start="118974" e_stop="118866"/>
            <exon e_start="118636" e_stop="118524"/>
            <exon e_start="118289" e_stop="117840"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="0.928" e_score="1.000"/>
          <exon-intron don_prob="0.774" acc_prob="0.879" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.953" e_score="1.000"/>
          <exon-intron don_prob="0.950" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.947" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.845" e_score="1.000"/>
          <exon-intron don_prob="0.893" acc_prob="0.961" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.940" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.883" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125858" e_stop="125623" e_length="236"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.980">
            <gDNA_intron_boundary i_start="125622" i_stop="125511" i_length="112"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="125510" e_stop="125363" e_length="148"/>
          </exon>
          <intron i_serial="2" don_prob="0.958" acc_prob="0.928">
            <gDNA_intron_boundary i_start="125362" i_stop="124488" i_length="875"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="124487" e_stop="124368" e_length="120"/>
          </exon>
          <intron i_serial="3" don_prob="0.774" acc_prob="0.879">
            <gDNA_intron_boundary i_start="124367" i_stop="124248" i_length="120"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="124247" e_stop="124113" e_length="135"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.953">
            <gDNA_intron_boundary i_start="124112" i_stop="124033" i_length="80"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="124032" e_stop="123971" e_length="62"/>
          </exon>
          <intron i_serial="5" don_prob="0.950" acc_prob="0.992">
            <gDNA_intron_boundary i_start="123970" i_stop="123624" i_length="347"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="123623" e_stop="123548" e_length="76"/>
          </exon>
          <intron i_serial="6" don_prob="0.956" acc_prob="0.988">
            <gDNA_intron_boundary i_start="123547" i_stop="122657" i_length="891"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="122656" e_stop="122555" e_length="102"/>
          </exon>
          <intron i_serial="7" don_prob="0.947" acc_prob="0.985">
            <gDNA_intron_boundary i_start="122554" i_stop="121695" i_length="860"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="121694" e_stop="121578" e_length="117"/>
          </exon>
          <intron i_serial="8" don_prob="0.994" acc_prob="0.997">
            <gDNA_intron_boundary i_start="121577" i_stop="121275" i_length="303"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="121274" e_stop="121216" e_length="59"/>
          </exon>
          <intron i_serial="9" don_prob="0.979" acc_prob="0.996">
            <gDNA_intron_boundary i_start="121215" i_stop="120188" i_length="1028"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="120187" e_stop="120013" e_length="175"/>
          </exon>
          <intron i_serial="10" don_prob="0.998" acc_prob="0.845">
            <gDNA_intron_boundary i_start="120012" i_stop="119424" i_length="589"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="119423" e_stop="119289" e_length="135"/>
          </exon>
          <intron i_serial="11" don_prob="0.893" acc_prob="0.961">
            <gDNA_intron_boundary i_start="119288" i_stop="119218" i_length="71"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="119217" e_stop="119119" e_length="99"/>
          </exon>
          <intron i_serial="12" don_prob="0.998" acc_prob="0.940">
            <gDNA_intron_boundary i_start="119118" i_stop="118975" i_length="144"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="118974" e_stop="118866" e_length="109"/>
          </exon>
          <intron i_serial="13" don_prob="0.999" acc_prob="0.883">
            <gDNA_intron_boundary i_start="118865" i_stop="118637" i_length="229"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="118636" e_stop="118524" e_length="113"/>
          </exon>
          <intron i_serial="14" don_prob="1.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="118523" i_stop="118290" i_length="234"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="118289" e_stop="117840" e_length="450"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125858" stop="125623"/>
              <exon start="125510" stop="125363"/>
              <exon start="124487" stop="124368"/>
              <exon start="124247" stop="124113"/>
              <exon start="124032" stop="123971"/>
              <exon start="123623" stop="123548"/>
              <exon start="122656" stop="122555"/>
              <exon start="121694" stop="121578"/>
              <exon start="121274" stop="121216"/>
              <exon start="120187" stop="120013"/>
              <exon start="119423" stop="119289"/>
              <exon start="119217" stop="119119"/>
              <exon start="118974" stop="118866"/>
              <exon start="118636" stop="118524"/>
              <exon start="118289" stop="117840"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570916" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTATATATTCTTAACAACTTCGTTTGTAACGGTCTCAACATATTCTCTCTGTTCTGTAAAACCGAATTGCTGCTAACCCTAGGATTTATGGCTGAAACTATACCTAATGGCGGGCCTGAGAGTGCCAATATTGATGGACCGACCAATCCTATGGTTACGCCTATTTTAACAGATCTCTATCAGTTTACTATGGCCTATGCTTACTGGAAAGCTGGAAAACACAATGAACGAGCTGT : GTTTGACTTGTATTTTCGGAGGAATCCGTTTGGTGGTGAATATACAATATTTGCTGGTTTAGAAGAGTGCATAAAGTTTATTGCTAATTTTAAATTTACTGAGGATGAGATAGCTTTCATCAGGTCATCGTTGCCATCGTCATGTGAG : GATGGCTTCTTTGAATACCTTCGAAGACTTGACTGTTCAGATATTGAGATATATTCTATTTCTGAAGGATCAGTAGTTTTTCCCAAGGTACCGCTGATGAGGATTGAAGGACCAGTTGCT : GTGGTTCAACTACTGGAAACACCATTTGTAAACCTCATAAATTATGCATCACTAGTTACTACTAATGCTGCAAGACACCGTTTCGTTGCTGGAAGGTCCAAAATATTGCTTGAATTTGGGCTTAGGAGAGCACAG : GGTCCTGATGGTGGTATATCAGCATCCAAGTATTGCTACATGGGTGGATTTGATGCGACAAG : CAATGTGGCAGCTGGAAAGCTGTTTGGAATCCCACTCCGTGGGACACATTCCCATGCCTTTGTTAGCTCATTTCTG : AGCCCAGATGAGATCATAGAGAAATCACTTCAACATCATAATGGTTCTAGTGTTTGTGAGGATTTTGTTAGTCTGGTACAGACATGGCTTGATAAATTAAAG : TGGTCACACTTATTGGGTGGAATTTTCAGCGAGACAAATCAAAGTGAGTTAGCCGCTTTCGCCTCGTATGCACTTGCATTTCCTGGAAGTTTTTTGGCCCTTGTAGACACTTATGAT : GTCATGAGAAGTGGTCTTCCAAATTTTTGTGCAGTTGCTCTTGCACTTAATGATTTGGG : GTATAAAGCAGTGGGCATTAGACTAGACTCTGGTGATCTTGCTTATCAGTCATGTGAAGCTAGGAAATTCTTTTGTGCTATTGAGAAAGAATTTGGATTGCCTGGTTTTGCAAAGACGAGTATCACAGCTAGCAATGATCTTAATGAAGAAACTCTGGATGCACTAAATAAACAA : GGTCACGAGGTTGATGCATTTGGTATTGGTACTCATTTAGTTACCTGTTATGCTCAAGCTGCTCTTGGTGTTGTTTTCAAGTTAGTTGAAATAAACAATCAGCCTAGAATCAAACTCTCTGAAGACGTATCAAAG : GTCTCTATTCCATGCAAAAAGCGGTGTTACAGATTGTATGGGAAGGAAGGGTACCCCCTTGTAGACATAATGACTGGTGAAAATGAGCCACATCCCAAG : GTAGGTGAACGAATTTTATGCCGCCACCCATTTAGTGAATCTAAAAGGGCATACGTAGTGCCCCAGCGTGTTGAGGAACTTTTAAAGTGTTTTTGGCCCGGAAAGTCAG : CTAAAACAAGAGAAGACCTTCCTCCTCTGAAGGAGATCAGGGAAAGATGTATTGCACAACTGGACCAAATGCGACCAGATCACATGAGAAGGCTGAACCCAACACCATACAAG : GTCAGTGTGAGTGCAAAGTTGTATGATTTCATCCATTTCCTCTGGCTCAATGAAGCACCTGTTGGAGAGTTGCAGTGAACCATGAATGAGAAGTTTGGGAGTCTTCTAGGTTTCTTGTGCATCTTTTTCATCATGTAAACTGAAATTTTACATAAAGTTATTAACCAAAGAGAAGTCCGTTCTTTACTTTTTCCCCCCAGTGATGTTCCGAGGCAATTGTATAAGCTTCCTTGGAAGTTTGTAAAGGTCAATAAAAGTGCATTTGTATTTTCCTCTCAATTGAGTCCTCAGAAATGCGTGGATAAAACTGGGTGAAACCCATGTGCACCTTATAGTTGTGATTAATGTAACTGAGCCAAATTATTGTGACTAGAAAAGGTTTCAGTAATGATTATGGAATTTCATTCTTCTGAAATTGCTCTGCTAGTTGGTTCTCCTTGCCAACTACAC</gDNA_template>
            <first_frame> L  Y  I  L  N  N  F  V  C  N  G  L  N  I  F  S  L  F  C  K  T  E  L  L  L  T  L  G  F  M  A  E  T  I  P  N  G  G  P  E  S  A  N  I  D  G  P  T  N  P  M  V  T  P  I  L  T  D  L  Y  Q  F  T  M  A  Y  A  Y  W  K  A  G  K  H  N  E  R  A  V :   F  D  L  Y  F  R  R  N  P  F  G  G  E  Y  T  I  F  A  G  L  E  E  C  I  K  F  I  A  N  F  K  F  T  E  D  E  I  A  F  I  R  S  S  L  P  S  S  C  E  :  D  G  F  F  E  Y  L  R  R  L  D  C  S  D  I  E  I  Y  S  I  S  E  G  S  V  V  F  P  K  V  P  L  M  R  I  E  G  P  V  A  :  V  V  Q  L  L  E  T  P  F  V  N  L  I  N  Y  A  S  L  V  T  T  N  A  A  R  H  R  F  V  A  G  R  S  K  I  L  L  E  F  G  L  R  R  A  Q  :  G  P  D  G  G  I  S  A  S  K  Y  C  Y  M  G  G  F  D  A  T  S :   N  V  A  A  G  K  L  F  G  I  P  L  R  G  T  H  S  H  A  F  V  S  S  F  L  :  S  P  D  E  I  I  E  K  S  L  Q  H  H  N  G  S  S  V  C  E  D  F  V  S  L  V  Q  T  W  L  D  K  L  K  :  W  S  H  L  L  G  G  I  F  S  E  T  N  Q  S  E  L  A  A  F  A  S  Y  A  L  A  F  P  G  S  F  L  A  L  V  D  T  Y  D  :  V  M  R  S  G  L  P  N  F  C  A  V  A  L  A  L  N  D  L  G :   Y  K  A  V  G  I  R  L  D  S  G  D  L  A  Y  Q  S  C  E  A  R  K  F  F  C  A  I  E  K  E  F  G  L  P  G  F  A  K  T  S  I  T  A  S  N  D  L  N  E  E  T  L  D  A  L  N  K  Q  :  G  H  E  V  D  A  F  G  I  G  T  H  L  V  T  C  Y  A  Q  A  A  L  G  V  V  F  K  L  V  E  I  N  N  Q  P  R  I  K  L  S  E  D  V  S  K  :  V  S  I  P  C  K  K  R  C  Y  R  L  Y  G  K  E  G  Y  P  L  V  D  I  M  T  G  E  N  E  P  H  P  K  :  V  G  E  R  I  L  C  R  H  P  F  S  E  S  K  R  A  Y  V  V  P  Q  R  V  E  E  L  L  K  C  F  W  P  G  K  S   : A  K  T  R  E  D  L  P  P  L  K  E  I  R  E  R  C  I  A  Q  L  D  Q  M  R  P  D  H  M  R  R  L  N  P  T  P  Y  K  :  V  S  V  S  A  K  L  Y  D  F  I  H  F  L  W  L  N  E  A  P  V  G  E  L  Q  *  T  M  N  E  K  F  G  S  L  L  G  F  L  C  I  F  F  I  M  *  T  E  I  L  H  K  V  I  N  Q  R  E  V  R  S  L  L  F  P  P  S  D  V  P  R  Q  L  Y  K  L  P  W  K  F  V  K  V  N  K  S  A  F  V  F  S  S  Q  L  S  P  Q  K  C  V  D  K  T  G  *  N  P  C  A  P  Y  S  C  D  *  C  N  *  A  K  L  L  *  L  E  K  V  S  V  M  I  M  E  F  H  S  S  E  I  A  L  L  V  G  S  P  C  Q  L  H </first_frame>
            <second_frame>  Y  I  F  L  T  T  S  F  V  T  V  S  T  Y  S  L  C  S  V  K  P  N  C  C  *  P  *  D  L  W  L  K  L  Y  L  M  A  G  L  R  V  P  I  L  M  D  R  P  I  L  W  L  R  L  F  *  Q  I  S  I  S  L  L  W  P  M  L  T  G  K  L  E  N  T  M  N  E  L   : C  L  T  C  I  F  G  G  I  R  L  V  V  N  I  Q  Y  L  L  V  *  K  S  A  *  S  L  L  L  I  L  N  L  L  R  M  R  *  L  S  S  G  H  R  C  H  R  H  V  R :   M  A  S  L  N  T  F  E  D  L  T  V  Q  I  L  R  Y  I  L  F  L  K  D  Q  *  F  F  P  R  Y  R  *  *  G  L  K  D  Q  L  L :   W  F  N  Y  W  K  H  H  L  *  T  S  *  I  M  H  H  *  L  L  L  M  L  Q  D  T  V  S  L  L  E  G  P  K  Y  C  L  N  L  G  L  G  E  H  R :   V  L  M  V  V  Y  Q  H  P  S  I  A  T  W  V  D  L  M  R  Q   : A  M  W  Q  L  E  S  C  L  E  S  H  S  V  G  H  I  P  M  P  L  L  A  H  F  * :   A  Q  M  R  S  *  R  N  H  F  N  I  I  M  V  L  V  F  V  R  I  L  L  V  W  Y  R  H  G  L  I  N  *  S :   G  H  T  Y  W  V  E  F  S  A  R  Q  I  K  V  S  *  P  L  S  P  R  M  H  L  H  F  L  E  V  F  W  P  L  *  T  L  M  M :   S  *  E  V  V  F  Q  I  F  V  Q  L  L  L  H  L  M  I  W   : G  I  K  Q  W  A  L  D  *  T  L  V  I  L  L  I  S  H  V  K  L  G  N  S  F  V  L  L  R  K  N  L  D  C  L  V  L  Q  R  R  V  S  Q  L  A  M  I  L  M  K  K  L  W  M  H  *  I  N  K :   V  T  R  L  M  H  L  V  L  V  L  I  *  L  P  V  M  L  K  L  L  L  V  L  F  S  S  *  L  K  *  T  I  S  L  E  S  N  S  L  K  T  Y  Q  R :   S  L  F  H  A  K  S  G  V  T  D  C  M  G  R  K  G  T  P  L  *  T  *  *  L  V  K  M  S  H  I  P  R :   *  V  N  E  F  Y  A  A  T  H  L  V  N  L  K  G  H  T  *  C  P  S  V  L  R  N  F  *  S  V  F  G  P  E  S  Q  :  L  K  Q  E  K  T  F  L  L  *  R  R  S  G  K  D  V  L  H  N  W  T  K  C  D  Q  I  T  *  E  G  *  T  Q  H  H  T  R :   S  V  *  V  Q  S  C  M  I  S  S  I  S  S  G  S  M  K  H  L  L  E  S  C  S  E  P  *  M  R  S  L  G  V  F  *  V  S  C  A  S  F  S  S  C  K  L  K  F  Y  I  K  L  L  T  K  E  K  S  V  L  Y  F  F  P  P  V  M  F  R  G  N  C  I  S  F  L  G  S  L  *  R  S  I  K  V  H  L  Y  F  P  L  N  *  V  L  R  N  A  W  I  K  L  G  E  T  H  V  H  L  I  V  V  I  N  V  T  E  P  N  Y  C  D  *  K  R  F  Q  *  *  L  W  N  F  I  L  L  K  L  L  C  *  L  V  L  L  A  N  Y   </second_frame>
            <third_frame>   I  Y  S  *  Q  L  R  L  *  R  S  Q  H  I  L  S  V  L  *  N  R  I  A  A  N  P  R  I  Y  G  *  N  Y  T  *  W  R  A  *  E  C  Q  Y  *  W  T  D  Q  S  Y  G  Y  A  Y  F  N  R  S  L  S  V  Y  Y  G  L  C  L  L  E  S  W  K  T  Q  *  T  S  C  :  V  *  L  V  F  S  E  E  S  V  W  W  *  I  Y  N  I  C  W  F  R  R  V  H  K  V  Y  C  *  F  *  I  Y  *  G  *  D  S  F  H  Q  V  I  V  A  I  V  M  *   : G  W  L  L  *  I  P  S  K  T  *  L  F  R  Y  *  D  I  F  Y  F  *  R  I  S  S  F  S  Q  G  T  A  D  E  D  *  R  T  S  C   : C  G  S  T  T  G  N  T  I  C  K  P  H  K  L  C  I  T  S  Y  Y  *  C  C  K  T  P  F  R  C  W  K  V  Q  N  I  A  *  I  W  A  *  E  S  T   : G  S  *  W  W  Y  I  S  I  Q  V  L  L  H  G  W  I  *  C  D  K  :  Q  C  G  S  W  K  A  V  W  N  P  T  P  W  D  T  F  P  C  L  C  *  L  I  S   : E  P  R  *  D  H  R  E  I  T  S  T  S  *  W  F  *  C  L  *  G  F  C  *  S  G  T  D  M  A  *  *  I  K   : V  V  T  L  I  G  W  N  F  Q  R  D  K  S  K  *  V  S  R  F  R  L  V  C  T  C  I  S  W  K  F  F  G  P  C  R  H  L  *   : C  H  E  K  W  S  S  K  F  L  C  S  C  S  C  T  *  *  F  G  :  V  *  S  S  G  H  *  T  R  L  W  *  S  C  L  S  V  M  *  S  *  E  I  L  L  C  Y  *  E  R  I  W  I  A  W  F  C  K  D  E  Y  H  S  *  Q  *  S  *  *  R  N  S  G  C  T  K  *  T   : R  S  R  G  *  C  I  W  Y  W  Y  S  F  S  Y  L  L  C  S  S  C  S  W  C  C  F  Q  V  S  *  N  K  Q  S  A  *  N  Q  T  L  *  R  R  I  K   : G  L  Y  S  M  Q  K  A  V  L  Q  I  V  W  E  G  R  V  P  P  C  R  H  N  D  W  *  K  *  A  T  S  Q   : G  R  *  T  N  F  M  P  P  P  I  *  *  I  *  K  G  I  R  S  A  P  A  C  *  G  T  F  K  V  F  L  A  R  K  V  S :   *  N  K  R  R  P  S  S  S  E  G  D  Q  G  K  M  Y  C  T  T  G  P  N  A  T  R  S  H  E  K  A  E  P  N  T  I  Q   : G  Q  C  E  C  K  V  V  *  F  H  P  F  P  L  A  Q  *  S  T  C  W  R  V  A  V  N  H  E  *  E  V  W  E  S  S  R  F  L  V  H  L  F  H  H  V  N  *  N  F  T  *  S  Y  *  P  K  R  S  P  F  F  T  F  S  P  Q  *  C  S  E  A  I  V  *  A  S  L  E  V  C  K  G  Q  *  K  C  I  C  I  F  L  S  I  E  S  S  E  M  R  G  *  N  W  V  K  P  M  C  T  L  *  L  *  L  M  *  L  S  Q  I  I  V  T  R  K  G  F  S  N  D  Y  G  I  S  F  F  *  N  C  S  A  S  W  F  S  L  P  T  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="-"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125858" stop="125623"/>
                    <exon start="125510" stop="125363"/>
                    <exon start="124487" stop="124368"/>
                    <exon start="124247" stop="124113"/>
                    <exon start="124032" stop="123971"/>
                    <exon start="123623" stop="123548"/>
                    <exon start="122656" stop="122555"/>
                    <exon start="121694" stop="121578"/>
                    <exon start="121274" stop="121216"/>
                    <exon start="120187" stop="120013"/>
                    <exon start="119423" stop="119289"/>
                    <exon start="119217" stop="119119"/>
                    <exon start="118974" stop="118866"/>
                    <exon start="118636" stop="118524"/>
                    <exon start="118289" stop="118212"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1761</number_coding_nucleotides>
                  <number_encoded_amino_acids>587</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LYILNNFVCNGLNIFSLFCKTELLLTLGFMAETIPNGGPESANIDGPTNPMVTPILTDLYQFTMAYAYWKAGKHNERAVFDLYFRRNPFGGEYTIFAGLEECIKFIANFKFTEDEIAFIRSSLPSSCEDGFFEYLRRLDCSDIEIYSISEGSVVFPKVPLMRIEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGRSKILLEFGLRRAQGPDGGISASKYCYMGGFDATSNVAAGKLFGIPLRGTHSHAFVSSFLSPDEIIEKSLQHHNGSSVCEDFVSLVQTWLDKLKWSHLLGGIFSETNQSELAAFASYALAFPGSFLALVDTYDVMRSGLPNFCAVALALNDLGYKAVGIRLDSGDLAYQSCEARKFFCAIEKEFGLPGFAKTSITASNDLNEETLDALNKQGHEVDAFGIGTHLVTCYAQAALGVVFKLVEINNQPRIKLSEDVSKVSIPCKKRCYRLYGKEGYPLVDIMTGENEPHPKVGERILCRHPFSESKRAYVVPQRVEELLKCFWPGKSAKTREDLPPLKEIRERCIAQLDQMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="-" PGL_start="128399" PGL_stop="127430"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="128399" e_stop="128157"/>
            <exon e_start="128045" e_stop="127976"/>
            <exon e_start="127885" e_stop="127735"/>
            <exon e_start="127617" e_stop="127430"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.988" acc_prob="0.900" e_score="1.000"/>
          <exon-intron don_prob="0.837" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.534" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="128399" e_stop="128157" e_length="243"/>
          </exon>
          <intron i_serial="1" don_prob="0.988" acc_prob="0.900">
            <gDNA_intron_boundary i_start="128156" i_stop="128046" i_length="111"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="128045" e_stop="127976" e_length="70"/>
          </exon>
          <intron i_serial="2" don_prob="0.837" acc_prob="0.997">
            <gDNA_intron_boundary i_start="127975" i_stop="127886" i_length="90"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="127885" e_stop="127735" e_length="151"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.534">
            <gDNA_intron_boundary i_start="127734" i_stop="127618" i_length="117"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="127617" e_stop="127430" e_length="188"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="128399" stop="128157"/>
              <exon start="128045" stop="127976"/>
              <exon start="127885" stop="127735"/>
              <exon start="127617" stop="127430"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600981" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATCAAAAAGTAGGTTTGTGCGAGGGGAATGCATTCACAAATGCCAAAGTGGCTGGGAATCTACAAGTTAACCAAGACGCCTCGTTAAATGCTATTTTCAACCCAACTGAAAATTGTACAGAAACTAAGGTAACACCACCGATAACTATGTCAAATATAAACCGGTCAGACAGTGCGTTTGAGCTTGAGTCATCGATGAATATTCACCTTGATCCCTTTCAGCTCTCAAGATCTACCAGCAAG : GAAATTTGGAGGGAGGATGACTTACCTTTATATGGTATGAATGAGCTAACGACCAAAACTGCATCAACTG : GATCAAATCTGGCATTCTCAGTTCCCCTAGATACGGATGCATCTAACCTGAAGAGAAGCACTCGGGAGGCCTGCTTGCTTCGATATCAGTTTGGTGCTGTGAATGAAACCAATCTGGATTGTGACCAACTTCTTTCCCAACAACTGTATAG : CAACTTCTGAATTTTGGCCTGCATCGCCTTGCTGGATTTTGTTGAAGTAATGAGACATGCATTTTGCTGCTTAGGACGTTTAATGTTGTTAACTTTTGGGCTCACTAGCCACTGTAATGAATGAATGGAATATAAATGAAAAGATTGGACTAGTTTCTATCTTGTTATGAAATACGAAAATTACTACT</gDNA_template>
            <first_frame> H  Q  K  V  G  L  C  E  G  N  A  F  T  N  A  K  V  A  G  N  L  Q  V  N  Q  D  A  S  L  N  A  I  F  N  P  T  E  N  C  T  E  T  K  V  T  P  P  I  T  M  S  N  I  N  R  S  D  S  A  F  E  L  E  S  S  M  N  I  H  L  D  P  F  Q  L  S  R  S  T  S  K  :  E  I  W  R  E  D  D  L  P  L  Y  G  M  N  E  L  T  T  K  T  A  S  T   : G  S  N  L  A  F  S  V  P  L  D  T  D  A  S  N  L  K  R  S  T  R  E  A  C  L  L  R  Y  Q  F  G  A  V  N  E  T  N  L  D  C  D  Q  L  L  S  Q  Q  L  Y  S :   N  F  *  I  L  A  C  I  A  L  L  D  F  V  E  V  M  R  H  A  F  C  C  L  G  R  L  M  L  L  T  F  G  L  T  S  H  C  N  E  *  M  E  Y  K  *  K  D  W  T  S  F  Y  L  V  M  K  Y  E  N  Y  Y  </first_frame>
            <second_frame>  I  K  K  *  V  C  A  R  G  M  H  S  Q  M  P  K  W  L  G  I  Y  K  L  T  K  T  P  R  *  M  L  F  S  T  Q  L  K  I  V  Q  K  L  R  *  H  H  R  *  L  C  Q  I  *  T  G  Q  T  V  R  L  S  L  S  H  R  *  I  F  T  L  I  P  F  S  S  Q  D  L  P  A  R :   K  F  G  G  R  M  T  Y  L  Y  M  V  *  M  S  *  R  P  K  L  H  Q  L  :  D  Q  I  W  H  S  Q  F  P  *  I  R  M  H  L  T  *  R  E  A  L  G  R  P  A  C  F  D  I  S  L  V  L  *  M  K  P  I  W  I  V  T  N  F  F  P  N  N  C  I   : A  T  S  E  F  W  P  A  S  P  C  W  I  L  L  K  *  *  D  M  H  F  A  A  *  D  V  *  C  C  *  L  L  G  S  L  A  T  V  M  N  E  W  N  I  N  E  K  I  G  L  V  S  I  L  L  *  N  T  K  I  T  T </second_frame>
            <third_frame>   S  K  S  R  F  V  R  G  E  C  I  H  K  C  Q  S  G  W  E  S  T  S  *  P  R  R  L  V  K  C  Y  F  Q  P  N  *  K  L  Y  R  N  *  G  N  T  T  D  N  Y  V  K  Y  K  P  V  R  Q  C  V  *  A  *  V  I  D  E  Y  S  P  *  S  L  S  A  L  K  I  Y  Q  Q   : G  N  L  E  G  G  *  L  T  F  I  W  Y  E  *  A  N  D  Q  N  C  I  N  W :   I  K  S  G  I  L  S  S  P  R  Y  G  C  I  *  P  E  E  K  H  S  G  G  L  L  A  S  I  S  V  W  C  C  E  *  N  Q  S  G  L  *  P  T  S  F  P  T  T  V  *  :  Q  L  L  N  F  G  L  H  R  L  A  G  F  C  *  S  N  E  T  C  I  L  L  L  R  T  F  N  V  V  N  F  W  A  H  *  P  L  *  *  M  N  G  I  *  M  K  R  L  D  *  F  L  S  C  Y  E  I  R  K  L  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="-"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="128399" stop="128157"/>
                    <exon start="128045" stop="127976"/>
                    <exon start="127885" stop="127735"/>
                    <exon start="127617" stop="127608"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>471</number_coding_nucleotides>
                  <number_encoded_amino_acids>157</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HQKVGLCEGNAFTNAKVAGNLQVNQDASLNAIFNPTENCTETKVTPPITMSNINRSDSAFELESSMNIHLDPFQLSRSTSKEIWREDDLPLYGMNELTTKTASTGSNLAFSVPLDTDASNLKRSTREACLLRYQFGAVNETNLDCDQLLSQQLYSNF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="-" PGL_start="129759" PGL_stop="128410"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="129759" e_stop="129327"/>
            <exon e_start="129192" e_stop="129091"/>
            <exon e_start="129007" e_stop="128942"/>
            <exon e_start="128817" e_stop="128752"/>
            <exon e_start="128474" e_stop="128410"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="0.958"/>
          <exon-intron don_prob="0.998" acc_prob="0.929" e_score="1.000"/>
          <exon-intron don_prob="0.802" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.963" e_score="1.000"/>
          <exon-only e_score="0.969"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.958">
            <gDNA_exon_boundary e_start="129759" e_stop="129327" e_length="433"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="129326" i_stop="129193" i_length="134"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="129192" e_stop="129091" e_length="102"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.929">
            <gDNA_intron_boundary i_start="129090" i_stop="129008" i_length="83"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="129007" e_stop="128942" e_length="66"/>
          </exon>
          <intron i_serial="3" don_prob="0.802" acc_prob="0.991">
            <gDNA_intron_boundary i_start="128941" i_stop="128818" i_length="124"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="128817" e_stop="128752" e_length="66"/>
          </exon>
          <intron i_serial="4" don_prob="0.994" acc_prob="0.963">
            <gDNA_intron_boundary i_start="128751" i_stop="128475" i_length="277"/>
          </intron>
          <exon e_serial="5" e_score="0.969">
            <gDNA_exon_boundary e_start="128474" e_stop="128410" e_length="65"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129759" stop="129327"/>
              <exon start="129192" stop="129091"/>
              <exon start="129007" stop="128942"/>
              <exon start="128817" stop="128752"/>
              <exon start="128474" stop="128410"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567860" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCTACATGTAAAACAGTGTGAACGTAGACAAAATTAACTTGATCTGCTCAACACTGAACTTGATTTTGCTGGACTATAATGGCCAACAACAATGTTTATTATCACAATGCTAATTTTTCTTTGACTGATCCTGATCCTGAACCAGATGATATTTCTGTGTTTCTTCGTCATATTCTACTTCCTTCTTCGTCTTCGTCTTCATCTTCATCTAATTTTATGGCCCTGAAGAGTAATGAAATGCAATATTCCTCATCATTACCTCATCTTATGCCTAATAATAATCAACAGGGTAATTTGTCATCCATGATGAATTCATCAGCTTGCGGCATTTTCTCGTCTTCCTATGGGGTTTGTAATGGTGCAACTACTGTTTCTTCCTCATCTGTTGGGACCATAGATTACGATCCGGATGAGTATGAATGTGAAAGTGAG : GATGGTACAGAGGATTTGGGGGCGGAAGCTTCAGTTCAACCGCCATCTCGTAACACTTCCAAGAGAAGCAGAGCAGCTGAAGTGCACAATTTGTCTGAAAAG : AGGAGAAGAAGCAGGATTAATGAGAAGATGAAAGCATTGCAAAAACTTATTCCAAATTCAAATAAG : ACTGACAAGGCTTCAATGCTTGATGAAGCCATTGAGTATCTTAAGCAGCTTCAGCTCCAAGTACAG : ATGTTGACAATGAGAAACGGGTTAAACATGTATCCTCTTGGCCTGCCACGAATGCTACAACAAAA</gDNA_template>
            <first_frame> S  Y  M  *  N  S  V  N  V  D  K  I  N  L  I  C  S  T  L  N  L  I  L  L  D  Y  N  G  Q  Q  Q  C  L  L  S  Q  C  *  F  F  F  D  *  S  *  S  *  T  R  *  Y  F  C  V  S  S  S  Y  S  T  S  F  F  V  F  V  F  I  F  I  *  F  Y  G  P  E  E  *  *  N  A  I  F  L  I  I  T  S  S  Y  A  *  *  *  S  T  G  *  F  V  I  H  D  E  F  I  S  L  R  H  F  L  V  F  L  W  G  L  *  W  C  N  Y  C  F  F  L  I  C  W  D  H  R  L  R  S  G  *  V  *  M  *  K  *   : G  W  Y  R  G  F  G  G  G  S  F  S  S  T  A  I  S  *  H  F  Q  E  K  Q  S  S  *  S  A  Q  F  V  *  K   : E  E  K  K  Q  D  *  *  E  D  E  S  I  A  K  T  Y  S  K  F  K  *   : D  *  Q  G  F  N  A  *  *  S  H  *  V  S  *  A  A  S  A  P  S  T   : D  V  D  N  E  K  R  V  K  H  V  S  S  W  P  A  T  N  A  T  T  K </first_frame>
            <second_frame>  P  T  C  K  T  V  *  T  *  T  K  L  T  *  S  A  Q  H  *  T  *  F  C  W  T  I  M  A  N  N  N  V  Y  Y  H  N  A  N  F  S  L  T  D  P  D  P  E  P  D  D  I  S  V  F  L  R  H  I  L  L  P  S  S  S  S  S  S  S  S  S  N  F  M  A  L  K  S  N  E  M  Q  Y  S  S  S  L  P  H  L  M  P  N  N  N  Q  Q  G  N  L  S  S  M  M  N  S  S  A  C  G  I  F  S  S  S  Y  G  V  C  N  G  A  T  T  V  S  S  S  S  V  G  T  I  D  Y  D  P  D  E  Y  E  C  E  S  E  :  D  G  T  E  D  L  G  A  E  A  S  V  Q  P  P  S  R  N  T  S  K  R  S  R  A  A  E  V  H  N  L  S  E  K  :  R  R  R  S  R  I  N  E  K  M  K  A  L  Q  K  L  I  P  N  S  N  K  :  T  D  K  A  S  M  L  D  E  A  I  E  Y  L  K  Q  L  Q  L  Q  V  Q  :  M  L  T  M  R  N  G  L  N  M  Y  P  L  G  L  P  R  M  L  Q  Q   </second_frame>
            <third_frame>   L  H  V  K  Q  C  E  R  R  Q  N  *  L  D  L  L  N  T  E  L  D  F  A  G  L  *  W  P  T  T  M  F  I  I  T  M  L  I  F  L  *  L  I  L  I  L  N  Q  M  I  F  L  C  F  F  V  I  F  Y  F  L  L  R  L  R  L  H  L  H  L  I  L  W  P  *  R  V  M  K  C  N  I  P  H  H  Y  L  I  L  C  L  I  I  I  N  R  V  I  C  H  P  *  *  I  H  Q  L  A  A  F  S  R  L  P  M  G  F  V  M  V  Q  L  L  F  L  P  H  L  L  G  P  *  I  T  I  R  M  S  M  N  V  K  V  R :   M  V  Q  R  I  W  G  R  K  L  Q  F  N  R  H  L  V  T  L  P  R  E  A  E  Q  L  K  C  T  I  C  L  K  R :   G  E  E  A  G  L  M  R  R  *  K  H  C  K  N  L  F  Q  I  Q  I  R :   L  T  R  L  Q  C  L  M  K  P  L  S  I  L  S  S  F  S  S  K  Y  R :   C  *  Q  *  E  T  G  *  T  C  I  L  L  A  C  H  E  C  Y  N  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0064B17.3" strand="-"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="129695" stop="129327"/>
                    <exon start="129192" stop="129091"/>
                    <exon start="129007" stop="128942"/>
                    <exon start="128817" stop="128752"/>
                    <exon start="128474" stop="128412"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>666</number_coding_nucleotides>
                  <number_encoded_amino_acids>222</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FCWTIMANNNVYYHNANFSLTDPDPEPDDISVFLRHILLPSSSSSSSSSNFMALKSNEMQYSSSLPHLMPNNNQQGNLSSMMNSSACGIFSSSYGVCNGATTVSSSSVGTIDYDPDEYECESEDGTEDLGAEASVQPPSRNTSKRSRAAEVHNLSEKRRRSRINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGLNMYPLGLPRMLQQ</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 53 chains have been computed
$ 
$ memory statistics:
$ 62752 bytes spliced alignments in total
$ 28 spliced alignments have been stored
$ 2241 bytes was the average size of a spliced alignment
$ 33560 bytes predicted gene locations in total
$ 22 predicted gene locations have been stored
$ 1525 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 61 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 08:44:50
-->
