<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-27 19:50:24"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_markers/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M8973" ref_strand="+" ref_description="SGN-M8973 C2_At5g46420 [cosii_markers]">
      <seq>tttctttctttcttgggtgttatcagaaaacatgcaaggctcctctgctctttcctgttcttcaaattctatctctgctccagttggtctctgctgttctcaaagactaacacttccttttcgaaatcaaagaattgggtgtttggaaaatccatcaagcttgaagattttccattttcaccgaaacactaccttccctttgctgaactgcactgctaccgaagagatcgtggaggctagtgagacagaggaattatttgttgaaactgggtacatatatagtgttcatgggcttcaaggagaggttcgagtaaaagtaacaactgatttccctgaattgcgattttcccagccaggaagacgatggttgaggcagcaagttacagggagagatatgattcaagaaatcgaactagtggagggaagaggtcatccaggacagaagagttggatacttaaattccacgagattagcacaatagagcaggctcaaaaacttgtggggtcggccttactggtgaaggatgaagatagaccaatcctggaggaaggtgaattttacacccctgaccttgttgggatgaaagtatttctaaaggaaactagagaactggtaggaactgttattaatgttttcaacagtggagctagtgatctcctacatgttgagcttctaccggatcgaaatgcaagaccacagttggaaggaagtgcatctggtcctcttgtatgggtccctttcgttgaagcaattgttccaaatattgatttgagtaaaagggaaatgctgattacacctccaaagggtcttttagaattaaacatccgtgcagatgagaggtccaagaaagagaggcgacagcttgaatggaaagagagaaaaaagtctcagaaacgcctcatagcagccaagaaaatattgcatgaaatggaacaagatcatatatttcatggtttcagatatggagagaaaaaccaaaggagcttccttgcaaatcagatagttgatgtaaattccatcttgcttcagcatgccttgcagaataaaaagattccatataagagatggagctttccagactttgttaatgctttacaagtaaacaatacattaaaactatccaaagaattcttctctaaagaaaatgttgaacactcaagcattggttctaaagttcaagagcagggtcattgcctcatatcttctggcaaggttgcgattgttttagctttgacagaaagcaagcttcttggaatgtcttctattcctgaacctgctgggcctcatgaggagattgcttatctgcacgtcaaggcattgctaaatgacagccacagattgctcaagatggaggaccggccctctgtacctcttatagtggtgtgtcctgctgaatctattgaatatctcaaacaattgttcatggatcatgactacttctctttcgactctgagaaggtttggttcttggaagaagagaagctccctgttgtcagtgcttcacaggaagaagaaaacaaacataaaattttaatgaaatcaccatgggagatactccaaagaccagctggatctgcaggaattgttactttgctctcatcacagaacctactagagcatttacatgtgatgggcgtggagtatattcaggtatgttctggcaatcaagaattcataaatggggagatgctacttggttttactaagtctcgtgaagccaatgcggggatccaagtcttcagggatgctggctacttggaagaacacttcaacatagtattttccattgattttgcaaagaaattgactaagaagatagacaaacttcaatttgaagccattttaaagccaaatcagtatgtggagatggtagaaaaagaatgggttgatgtcatcccctcctcacccaactcgtatgagtttcattcatcgatttatagctgcttgaacgcttgtcctcctagtaaggtttgtctggtagacattactgcatgatatcgatatcttcatacatgtatatgactccaacttagcctcaaaagcatagaagatgttttaataacacaagtatctttgttcttaatatcacacacttcttctttttttcttctgtttccgtaaagtttcaacttcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="15682" stop="5231"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15382" g_stop="15168" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="215" r_length="215" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15167" i_stop="13374" i_length="1794">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.880" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13373" g_stop="13237" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="352" r_length="137" r_score="0.956"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="13236" i_stop="13146" i_length="91">
            <donor d_prob="0.017" d_score="0.96"/>
            <acceptor a_prob="0.922" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13145" g_stop="13011" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="487" r_length="135" r_score="0.978"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13010" i_stop="12598" i_length="413">
            <donor d_prob="0.584" d_score="0.96"/>
            <acceptor a_prob="0.943" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12597" g_stop="12487" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="488" r_stop="598" r_length="111" r_score="0.982"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="12486" i_stop="12377" i_length="110">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.880" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="12376" g_stop="12110" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="599" r_stop="865" r_length="267" r_score="0.989"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="12109" i_stop="10084" i_length="2026">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10083" g_stop="9884" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="866" r_stop="1065" r_length="200" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="9883" i_stop="9255" i_length="629">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="9254" g_stop="8972" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="1066" r_stop="1348" r_length="283" r_score="0.972"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="8971" i_stop="8599" i_length="373">
            <donor d_prob="0.644" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="8598" g_stop="8488" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1349" r_stop="1459" r_length="111" r_score="0.991"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="8487" i_stop="7750" i_length="738">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="7749" g_stop="7558" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="1460" r_stop="1651" r_length="192" r_score="0.984"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="7557" i_stop="6001" i_length="1557">
            <donor d_prob="0.815" d_score="0.98"/>
            <acceptor a_prob="0.952" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="6000" g_stop="5512" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="1652" r_stop="2137" r_length="486" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-M8973" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>2140</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-M8973" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15382" e_stop="15168"/>
          <exon e_start="13373" e_stop="13237"/>
          <exon e_start="13145" e_stop="13011"/>
          <exon e_start="12597" e_stop="12487"/>
          <exon e_start="12376" e_stop="12110"/>
          <exon e_start="10083" e_stop="9884"/>
          <exon e_start="9254" e_stop="8972"/>
          <exon e_start="8598" e_stop="8488"/>
          <exon e_start="7749" e_stop="7558"/>
          <exon e_start="6000" e_stop="5512"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTTCTTTCTTGGATGTTATCAGAAAACATGCAAGGCTCCTCTGCTCTTTCCTGTTCTTCAAATTCTATCTCTGCTCCAGTTGGTCTTTGTTGTTCTCAAAGATTAACACTTCCTTTTCGAAATCAAAGAATTGGGTTTCTGGAAAATCCATCAAGCTTGAAGATTTTCCATTTTCACCGAAACACTACCCTCCCTTTGCTGAACTGCACTGGTAAATCTTCTTTCCATTAAAGTTTTAATCTTTATTGATTTTTGAGTTTCCATAATGCTTACTTTGATTTTTTCTGACTTTTTCCGAACTGGGTTGTGTTTATTTTGGTAGTATCAGAAATTACTCACTTCCAAGTATATACTGTTTTCAACTGAATTCTGAAATATGTTCTCAAGATGTTATGCTTTGCTTTTGTGGATTTTATGTTCCTTTGAATTATCATTAGTATTATGTTCTGACGAAGTGGTGTCCCTTGTCCAGCCAGCTTGGCAAGATCCTCTTGGTCTGGTTTAGAGATTGTATGTCGATATAAAAATAAGCCCGTGGCTGTGAGATTTAGAGAGTCTGAATTTTTCAGAGAACCCCTAATTTGTTTTAAAGAAAAATTATTGAGTATTGGAGTGAAATGGGTCCAAATATGGGGTGAATGGATGTTGAGGGTTAATATAGTGGACCAAAATTAGTTTAGGATTAACAAGTAGTAGTAGTAGACGACTAGTTTTTGCTGCTGAATAACACGTCAACATACCCAGTGTAGTCCGGGGGGGGGGTCTGGAGTGGGTAGAGTGTACGTAGGCCTTACCCCTACCTCACGGAGGCCTCTGCTGAATACATGCTGCTTAGTATAAAAGTATAGGTACATAGTATGGGATTTGAGACTTATCATTGGACATGTCCTTCTCAGTTCAGCTTATTTCTACATTCCTCGACTTCGTTTTGTTTCTTTTTGTAAGTTTGTTCTGTGGTTTGTCTATTTGTTGGTTCTAGTTTTGAAGCAGGAGCATCTTCAGATAATTCTATCAAGTTAATTGTACTTAAAGTTAGTCATTACTTCACAGTTAGGCAAATTAAGTTAATGTTGGCAACACATTATCAGATTAATGTAAGGTAGATTTATCTAATATCAATTTCTTGGGTCAGATCTTTTGCTTTTTTTAGTTTGCTATTTATGTCTTGCGTAGAAGTAAAGCGTCTTGGCAACTCATATTATGCGGCTTTGTCCCACAGTGACACTTCTGGCTTCATACTTAATCTTGTAGTTGCACTCTGACAATTGCTTTAGAATCCATACCGAAGATCGAAAGTGAGAGCATCATTATTTAAGGCAAAAGATGCAAAAGTACAGTAGGAGATGAATATTTGTTCTTTTGGTAGGTTGGATATACATGAACGGTAACTCAAGACACATTTATGTTTCTTGCCTATCCCAAACAAGGTACAGTGACCACGACCCATCAGAAGACACTAGGTTTAATAGAAGTTTTGGAATTGAGCAAAACCTTGAATTTTGTGCTGTTATTTGCTGTTCTATTGACATTTCACTTGAGCTGTTTCCTTCAATGACACACCGGCTAATCATTACTTTTATCTTCTGCAAGTATATGTTGTATATTTGAGCTATCTTAAGTATCACATCTTGTGATTGTTGTCATTCTACACCCTTAAGCTTAAGCAAGTGTGAGGTAATCTTTGAATTTGTAAATTCTTACAAATTCCAGTTAAAAGTTTCCCGAATCAAGTTAATCACATAACATAGAAAAATCATGTATGATGTTCTTCCTGGAAAGATATCATCTCATAATAATGTACGCTTTCTACAAATTTGTTACTCATCATGATATACCAAGTCATGTGAATTAGTTATCAGTTACAGAACGCAGTGCTTAGACTGTCAAGCATCTTAATTATGCTAGAGTATCACAGTAGTTTTCATTCACTAGAAAGTTTTCTTTATAGTTTCTGCAAAGTCACTTGGTCCTCAAGTTAAGCACCTTTATTGTTTGTTCATTTCAGCTACGGAAGAGATCGTGGAGGCTAGTGAAACAGAGGGATTATTTGTTGAAACTGGGTACATATATAGTGTTCATGGGCTTCAAGGTGAGGTTCGAGTAAAAGCGACAACTGATTTCCCTGAATTGCGATTTTCCCAGGTAGAAAGCATCAGGAACTTAATAATGGGACTGGTTTCTCGTTTTTGGCCTTCATGAGAATATCCTTTTCATGAATTCACTCTTAATTTAGCCAGGAAGGCGATGGTTGAGGCAGCAAGTTACAGGGAGAGATATGATTCAAGAAATCGAACTAGTGGAGGGAAGAGGTCATCCAGGACAGAAGAGTTGGATACTTAAATTCCACGAGATTAACACAATTGAGCAGGTGATCTCCGTGTAATTATGCTGTACATTGGGTTTCCACAACCCACACTATTGTTTTTCCTCATATATTATGGAATGCAGTAAATATGTCTTTTGATTATAATGACCTTATCTTTCCTGTGTTAAATTAATTTTAAATCATGCATGTACAATCACAGTATTTCAATACAGCAAAGTGGCAGTGTCATGTAAGAAAGTTGGAAGAATTTTATATGACTTTACTACCGAATCGAAAATATTTGGTTCATCTTTTGTAAATAAAGGCAAATTTCACTCTGCCCATTAAATACGGAACCATTACTACAATTCTAATGCCAGTTTTATGTATCACCTGAGACATATTTTGGAAATGGACTTGATCTTTATCTTAGGGCATGGCCGTTTGATATATCTTGTTTTCTCGATTCTCCTCAGGCCCAAAAACTTGTGGGGTCGGCCTTACTGGTGAAGAATGAAGATAGACCAATCCTGGAGGAAGGTGAATTTTACACCCCTGACCTTGTTGGGATGAAAGTATTTCTAAAGGTTTGTTTCCACGGCTTCTGACTTTCATAAAAGGCACACAGTTCTTTAGTTTAATTTCTATTGGAGCTGAGTGGCACTTAAAAGGGATCTTCTATTTTTATGTGCTCCAGGAAACTAGAGAACTGGTAGGAACTGTTATTAATGTTTTCAACAGTGGAGCTAGTGATCTCCTACATGTTGAGCTTCTACCGAATCAAAATGCAAGACCACAGTTGGAAGGAAGTGCATCTGGTCCTCTTGTATGGGTCCCTTTCGTTGAAGCAATTGTTCCAAATATTGATTTGAGTAAAAGGGAAATGCTGATTACACCTCCAAAGGGTCTTTTAGAATTGAACATCCGTGCAGATGAGAGGTCCAAGAAAGAGAGGCGACAGCTTGTGAGTTGCTTTTCTTTTTTCTCCCATTTTGCCAGAATTTATCATATAGGTCACATGCTATTGCGGAGTGCTGTCAGTGTGGTTTCAGAAATCATAATTTCTTTTAAAAGAAATTTTATTTATCTTTGATTCTTTTCTAGAGAAGCAACACCTTGTGAGTTGATTTTGTTTGTGTTCACTTTTCTAGAATCAGAGTGCTGTCTCAATCATTTAAGAAGTCACTTTGCCATTTTCAAAGAAATTCTAGCTACTTTTTCTCAAGTACTCTGATTGGGTTTTTTCATATTCATTATTGGTTACAAGTTACTCTTGTGTGGTTTACTTTATAAATTTGACCAATCACAGACGTGCGTAAAGCAGTCAAGTTTAATTTTCTTCTTCTTGGCGCCTTCTCTAGTACTCCTTATGCTTCGTCTTGCTACACACCTCTTTCAGGGGTAGACCAGATACAATACCTTCAGTTTGGAAGTAATTAACCAAAAAATTATAGTTTTCCTTAGATTTTTGGTAAGGAATTATAGCTGCCCTCAAAACACATTTTGTTTCATCTCTTTCGGTATCTTCCTGGATTTTTGGCAGTATAGAAGCCTCCACTTTGTTCATCCCATTTGAATCTATTATCTTCACAGGGAAGTCCCTGAAAACTCCCATTTGTACTGTAAAATTCAGCAACTGTCACCAATTGCCAATCGTTGAAATGTCTTCTGAATCTGATGTTTCATATCTCATAGTCCCTGGATTCTGCTACAGTAGCTTCAGGGTACTGAATCAAGTTGAAAAAACAAAAGGAGTTGTATTTTTGGATGATTGTGGACTATCCATTTGTCATGACATAAGAGACTTTCCTTCCATTACTCCCGATGATGCTTGTTATTTGCAAAACTCAGACCACATCTTGCCAATAGGTGGTTTCTTATCTTAACCTATATGTGTTGTTTGCATCCTCTGCCAGGTGTAATCATTTCTAATCTTGCCCAACATCTTTTAAAGACAAATACATCTCAATGTTCACATTTCTATGACACTCATCCTATGAATAATTAGACCTTAGCAGCCTAACTTTTTTTTTTTTATCAAAGCCATGGAAACCCAACATTTACTCCAATATAACATTGCTGGCCTTACTGCCGTTAAATAATTTTTTTTAGGTACTTTGTAGTTGCACGGAAATCCACATCACTTATTCATTTCAGTCATCCTATATTTAATTTCTGTGTTATATCTTCATCTATCATGTCTTTTTTCTTTTAAGGCCAAGTTTAACGGGGTTTATCTTTATAGCTGCTTTACAGGTTTTTGGTCTGTTAGCTTCATGTTACTTTCATGTTTGAAGCAACTTTATTTTCTCTATAACCTTTGCTCCTTGATGCCTTTCTAATACAGTTTAGTCTTCACCAAAAAAAAAAATCTAAAAAGATTCTGCATTTAGGCACAACAATTACATCGAACCTCACTTTGCCTTCATTCTTACTATGGAGGCAAAACTTGCATATTAGTTCTACTTATCCTAAAACCCTTACTTAATGGAGTGTATTTCAATATTTTCAACTTTTTATTGATTCACTCCCTCATTTAATCAATTGACAATTATCTGCAAATAACAGTTCCCGTATAAAGTGAAGTTAGATGACTGTAGCCACTTGTTAGAAGATGGCGGTTGCGCCACCATATATTCACATCATTAATAGTTGTTAACTCCACAATGGTGAGATAAGAACAAGGTGAATTTGGTTTGTGCAGAAGGATAAATTCTTTAACATCTAAATAAATGGTTACCCACTTCTCCTCATAAGAATGTAGTGCAGTGATTATCATTAAATAGATGTCATAATTTTCTTATCCGAGCTCAATGACAAAGTAATTCTTGATGGAGAGTTCATACTTAGCTGTTCCAGATGAGTGCCGGTCATTAAGTAATGCCTCTAAAGTTGCTTTTCTCTCCGGTGCTCCTCTGTGATTGTCGTAGGTACTAAATCTATAGCATTGATCTAGTGTGTTTGGCCTACTTAACCTTCTTCTTTTTCAGGAATGGAAAGAGAGAAAAAAGTCTCAGAAACGCCTCATAGCAGCCAAGAAAATATTGCATGAAATGGAACAAGATCATATATTTCATGGTTTCAGATATGGAGAGAAAAACCAAAGGAGCTTCCTTGCAAATCAGATAGTTGATGTAAATTCCATCTTGCTTCAGCATGCCTTGCAGAATAAAAAGATTCCATATAAGAGGTGCAGATATTAGTTAATTTCCTGTCTTTTGTCATTATATACCCTTTTCTAATCCTGCGAAGTGTATGTCATACATGCTTTAAGTAGGCTAACCATTCTTTTACACTGACATCCCATATTCTAAATGTTTAGTAGAATGTCAAGGGAAAAAGCTAGGATTCTTTTTGAGACCCTATCTTTTCCACGGTTTGTGGTAACCGATGTATAACTAGAATCAAACAACCAAAGTGACCTACTTCTCCCCACCCTCATCCCCCCAAAAATGAAAGAAGAACGAAAGGAAGAAACAAAAACTATAGACACAAATTGACCTCTGCTTTGGATGATTATGTATTTCTAATTAATCTCCTGTGGTGACCTGTTAAAAATTGGTAGTGCTGAAAGATATATGGGAAGAGGTCCCAGTGAAGAGTTTTTTAGAAGACCACACAAAGCGAGAAATCTCCTCTTTTAATGCAAATTAGTTGTGGGCTTTAGGCTCAGTATACTGGTTGGATGCTGTCTAGGACTGGGTTCTTTTACCTGATATTGACTTTTATATATAACAGATTCTTATTTCTTTATTTTGGGAGTTGGTTGGAGAAATACTATCATTTGCCTTAAATTTTGAATTTTTTTCCTTGCGGCAGATGGAGCTTTCCAGACTTTGTTAATGCTTTACAAGTAAACAATACATTAAAACTATCCAAAGAATTCTTCTCTAAAGAAAATGTTGAACACTCAAGCATTGTTTCTAAAGTTCAAGAGCAGGGTCATTGCCTCATATCTTCTGGCAAGGTTGCGATTGTTTTAGCTTTGACAGAAACTAAGCTTCTTGGAACGTCTTTTATTCCTGAACCTGCTAAGCCTCATGAGGAGATTGCTTATCTGCACGTCAAGGGATTGCTAAATGACAGCCACAGATTGCTCAAGGTAGTCCTTCCTTCAGAAGTAGAACTAGAGATGGTATTGTGTTCTGTAAATTGAACTGCTATTTCCTATATGCCCATCAGGAGTGAAGTATATCTACCGTGTAGTTGTCACTTTATTCCCAGCAGCCAATTGCTTGAAAGTAGATTACACATGCATTATATTGTTATCAGATGATCCTGATAAAGTTTGGGACATGTAGATTATGAGTTTTTTCCTGGACTTGTATACATGCAAGTGTAATTCACATTCGAGCTGATTGACTAAAGGTCCATTTACTCTAGTTTTTGATGTTCTCGTGAAGAAGGGATATTACTTGTCTTGCTGGAGAGAATTACTCTTCATCATGTTTTGAAATTTTTCTTGTCAATTGCAGATGGAGGACCGGCCCTCTGTACCTCTTATAGTTGTGTGTCCTGCTGAATCTATTGAATATCTCAAACAATTGTTCATGGATCATGACTACTTCTCTTTCGACTCTGAGAAGGTTAGATGCATGTACTTTGGCTATGTAATTAGTTACGTGACAGTTAGGAAGCTTGGTCATAATGATCTATAAGGAATTTATTTCACATTCCTCCATCGTCTTCATTCCTTTAGGATAAATGTTACTAATACACAGACTTAGCTGAGAATTACTGTTAGCACTTTGATTGCCTCAATCTAATTCTGAAAGTATAGAGGAACCACTTGGTTGGTCTTTAACTGGAACTATATCACTCATTCAGTCATGCTTTAAAACAGATATAGGGACTCTAGTGTTATTGATGCTGCTAGACTTCATTAAAGTCATGTAGATGAACCTCAACTGTGAAAAATAAGTTATGCTATTGGCCTAATCGTGTTCCATATCCTTATTCTAGAAATCCCTACCCTGTGGCCTTGGCCAAATAATGCAATCCGCTGAGGGAAGTTCTATTGCATGCTTATAGCCAGTTCATCTAGATTTGAAACTATTATCTCTATGAAAAAGTGGACAAGTTCCTCCTATCAGGCATTCAAGCAACTTCCGGATATTGTTAATTTTGGTTGGTTGGACTAATTTCTGTGATAAGACTACTTACTTAACTACCGTCTATCTATGATTTTGTTTGCATTACTTTTTAATTGTTTTCTGTAAACTATGTCCATTTTCTCTTTCACAATTTTATCATCACTATTGACATGATAATAGGTCTAGCTGCATGCAGTTTCTTAGTTTTTACATCATTTGAATCATTCACAGGTTTGGTTCTTGGAAGAAGAGAAGCTCCCTGTTGTCAGTGCTTCACAGGAAGAAGAAAACAAACATAAAATTTTAATGAAATCACCATGGGAGATACTCCAAAGACCAGCTGGATCTGCAGGAATTGTTACTGTGCTTTCATCACAGAACCTACTAGAGCATTTACATGTGATGGGTGTGGAGTATATTCAGGTGAGAGTTCAGATATTGGCTAGGTGTTGACTTCTGCATTTGATTTCTGACTAACTGCAATTGGCGTGTTAAGTAGCATGTATACTCCTTTTTCTTGTCCTTATAGATCTGTCTTAAGTGTTAATTGTTAATTCGGCATGCATGTTGGTTGTACGCTTGAATTGCTTAGAACAATCTCCTTACTGATTCTGGAAAAGGGCTGCAAATATACACTCCTTATGTTCCTGTCTACTCTAGTCAATTGATGAAAGTGATAACACTTATTCTGAAATATTTTTCATCACCAGCAGTTGGATTGATGTATGCATGTGAAGTTTTCTATAAAACACATCTGTGTTGCCAGTGTTAAGAAACAATTCAAGCACCAGCCTTTATTTTTTTAATTTTCCTCTCTATCTCCTTTTTTTTGTGTGTGTTTGTGTGTTGGTGGTAGTTATTGCATTGACCTGGATTATTTTATAGAAGAGAGTTTTCTGAAGACGGTAATGGCAACTTAGAATATGTTCCCAACATCATTTACATAAAAAATGTGAACCAGTAGGATCTTCATCACTATTATAGGGAAATAGTGATTCATGTGTAACTTTAAAAAGTGTTTTTAGTTTAAAAGGTACATAGTTTATTTCTTTGAAAAATATCAACCGCTGAACAAGTGCTTAGAGCAGTTACCTTGTCCACTCACACATGTAATTTCGAATGTCATGTAAGAAAGCTAGCTCTTTACTTTATCGGGAAAAAGCTAGCTCTTTATGTCAGTGTTATAGATGGGAAATGCTTATGGAGATTTATTAGTATTTAGTTGTAAGGAGGGTGAGGAGAGTAGGGTGTGGAATTGCTGGATAGGATGGTTATGTTACCTATGCTAATGAATGCCATGCCTAACTGATTTAGTGATTGGACTAGTTAGTACTGTTATACACATTTGTTTGCAAAGAGGTTGGAAGTAATAAGATTAGGGTGGAACACTATGAATCTGCAAGTTATTGTACTAGACATTAGGGAGGAAGTAGCCGAAGGAAAGGTGAGAGTATGATGTCATGATATCCTTCATTTTGCTGCGAGTTTCTCCATGTATCGGTGTTCTCTATTTTTTGGAACTTAGGCTCTTTTCTTTAAACCTTGCTTTCAGTATAAAGGTGGGAATTATTGAATTCGTTAGATAATTCTGGTTCTAACAATCACCAGTTACTGTTCAGTCCTTTGGGGTTACTAGCTTCCTTGCTAAGTGTCATGTCTTGAGACAATGCTTCAAACTGGTCCAAATCAAGCATTATAATGGATCTAAAGAGGCTCATCCCCCATCTCCCATGCCCCAAGCACCAAAGAGGGAAACTAATAAGAGATGTTCAAAAACATAAATGTCAAAACTAAGAATGGATAGTAGAGTGAGACAGTAAAAGGATCTCAATTAAACCTATATCAGTCACTTGTTTTAATTGATGTTACTAGTGGTTTTGCATAATTGATGTTATTAGTGGTTTTGCACTTCAGCGAGTCCATATTACCAGTGGGTTTGCACTACTATGAAACCGTGTTAACAGTTGGTTTCCAATACAGGTATGTTCTGGCAATCAAGAATTCATTAATGGGGAGATGCTACTTGGTTTTACCAAGTCTCGTGAAGCCAATGCGGGGATCCAAGTCTTCAGGGATGTTGGCTACTTGGAAGAACACTTCAACATAGTATTTTCCATTGATTTTGCAAGGAAATTGACTAAGAAGATAGACAAACTTCAATTTGAAGCCATTTTAAAGCCAAATCAGTATGTGCAGATGGTAGAAAAAGAATGGGTTGATGTCATCCCCTCCTCACCCAGCTCGTATGAGTTCCATTCATCGATATATAGCTGCTTGAACTCTTGTCCTCCTAGTAAGGTTTGTCTGGTAGACATTACTGCATGATATTGATATCTGCATACATGTATATGACTCCAACTTAGCCTCAAAAGCATAGAAGATGTTATAATAACACCAGTATCTTTGTTCTTAATATCACACCCTTCTTTTCTTTTTCTTCTGTTTCCTTATTAATGTTTCAACTTCATT</genome_strand>
        <mrna_strand>TTTCTTTCTTTCTTGGGTGTTATCAGAAAACATGCAAGGCTCCTCTGCTCTTTCCTGTTCTTCAAATTCTATCTCTGCTCCAGTTGGTCTCTGCTGTTCTCAAAGACTAACACTTCCTTTTCGAAATCAAAGAATTGGGTGTTTGGAAAATCCATCAAGCTTGAAGATTTTCCATTTTCACCGAAACACTACCTTCCCTTTGCTGAACTGCACTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCGAAGAGATCGTGGAGGCTAGTGAGACAGAGGAATTATTTGTTGAAACTGGGTACATATATAGTGTTCATGGGCTTCAAGGAGAGGTTCGAGTAAAAGTAACAACTGATTTCCCTGAATTGCGATTTTCCCAG...........................................................................................CCAGGAAGACGATGGTTGAGGCAGCAAGTTACAGGGAGAGATATGATTCAAGAAATCGAACTAGTGGAGGGAAGAGGTCATCCAGGACAGAAGAGTTGGATACTTAAATTCCACGAGATTAGCACAATAGAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAAAACTTGTGGGGTCGGCCTTACTGGTGAAGGATGAAGATAGACCAATCCTGGAGGAAGGTGAATTTTACACCCCTGACCTTGTTGGGATGAAAGTATTTCTAAAG..............................................................................................................GAAACTAGAGAACTGGTAGGAACTGTTATTAATGTTTTCAACAGTGGAGCTAGTGATCTCCTACATGTTGAGCTTCTACCGGATCGAAATGCAAGACCACAGTTGGAAGGAAGTGCATCTGGTCCTCTTGTATGGGTCCCTTTCGTTGAAGCAATTGTTCCAAATATTGATTTGAGTAAAAGGGAAATGCTGATTACACCTCCAAAGGGTCTTTTAGAATTAAACATCCGTGCAGATGAGAGGTCCAAGAAAGAGAGGCGACAGCTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGGAAAGAGAGAAAAAAGTCTCAGAAACGCCTCATAGCAGCCAAGAAAATATTGCATGAAATGGAACAAGATCATATATTTCATGGTTTCAGATATGGAGAGAAAAACCAAAGGAGCTTCCTTGCAAATCAGATAGTTGATGTAAATTCCATCTTGCTTCAGCATGCCTTGCAGAATAAAAAGATTCCATATAAGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGCTTTCCAGACTTTGTTAATGCTTTACAAGTAAACAATACATTAAAACTATCCAAAGAATTCTTCTCTAAAGAAAATGTTGAACACTCAAGCATTGGTTCTAAAGTTCAAGAGCAGGGTCATTGCCTCATATCTTCTGGCAAGGTTGCGATTGTTTTAGCTTTGACAGAAAGCAAGCTTCTTGGAATGTCTTCTATTCCTGAACCTGCTGGGCCTCATGAGGAGATTGCTTATCTGCACGTCAAGGCATTGCTAAATGACAGCCACAGATTGCTCAAG.....................................................................................................................................................................................................................................................................................................................................................................................ATGGAGGACCGGCCCTCTGTACCTCTTATAGTGGTGTGTCCTGCTGAATCTATTGAATATCTCAAACAATTGTTCATGGATCATGACTACTTCTCTTTCGACTCTGAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGTTCTTGGAAGAAGAGAAGCTCCCTGTTGTCAGTGCTTCACAGGAAGAAGAAAACAAACATAAAATTTTAATGAAATCACCATGGGAGATACTCCAAAGACCAGCTGGATCTGCAGGAATTGTTACTTTGCTCTCATCACAGAACCTACTAGAGCATTTACATGTGATGGGCGTGGAGTATATTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGTTCTGGCAATCAAGAATTCATAAATGGGGAGATGCTACTTGGTTTTACTAAGTCTCGTGAAGCCAATGCGGGGATCCAAGTCTTCAGGGATGCTGGCTACTTGGAAGAACACTTCAACATAGTATTTTCCATTGATTTTGCAAAGAAATTGACTAAGAAGATAGACAAACTTCAATTTGAAGCCATTTTAAAGCCAAATCAGTATGTGGAGATGGTAGAAAAAGAATGGGTTGATGTCATCCCCTCCTCACCCAACTCGTATGAGTTTCATTCATCGATTTATAGCTGCTTGAACGCTTGTCCTCCTAGTAAGGTTTGTCTGGTAGACATTACTGCATGATATCGATATCTTCATACATGTATATGACTCCAACTTAGCCTCAAAAGCATAGAAGATGTTTTAATAACACAAGTATCTTTGTTCTTAATATCACACACTTCTTCTTTTTTTCTTCTGTTTCCGTA--AA-GTTTCAACTTCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M3002" ref_strand="+" ref_description="SGN-M3002 cLEC-27-M9 [est_clones]">
      <seq>ccaactgaagcacaagttaaagatattgcacagtggttactagttgctcataaggactctacaggtttaagtaccgactgccttgcggatgctggttatcctggtgcggctttactgggagatgctgtttgtggcatggctactgcgagaattacttccaaggattttctattctggttcaggtctcacacagctaaggaagtcaagtggggaggtgctaagcatcatccagatgataaagatgatggaggaaaaatgcacccacgatcttcatttaatgcctttcttgaagtggttaaaagcagaagtttgccatgggagattccggagattaatgccattcattctctacaaatcataatgagagaatcaatccaagagaacgaaaacagctctctaaaaactttgactacttctcaacagaatgatgctgatgggccaagcatggatgagcttagttctgtggcaatggaaatggttagattgattgagac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="35745" stop="34652"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35445" g_stop="34952" g_length="494"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="494" r_length="494" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-M3002" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>494</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-M3002" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35445" e_stop="34952"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAACTGAAGCACAAGTTAAAGATATTGCACAGTGGTTACTAGTTGCTCATAAGGACTCTACAGGTTTAAGTACTGACTGCCTTGCGGATGCTGGTTATCCTGGTGCGGCTTTACTGGGAGATGCTGTTTGTGGCATGGCTACTGCGAGAATTACTTCCAAGGATTTTCTATTCTGGTTCAGGTCTCACACAGCTAAGGAAGTCAAGTGGGGAGGTGCTAAGCATCATCCAGATGATAAAGATGATGGAGGAAAAATGCACCCACGATCTTCATTTAATGCCTTTCTTGAAGTGGTTAAAAGCAGAAGTTTGCCATGGGAGATTCCGGAGATTAATGCCATTCATTCTCTACAAATCATAATGAGAGAATCAATCCAAGAGAACGAAAACAGCTCTCTAAAAACTTTGACTACTTCTCAACAGAATGATGCTGATGGGCCAAGCATGGATGAGCTTAGTTCTGTGGCAATGGAAATGGTTAGATTGATTGAGAC</genome_strand>
        <mrna_strand>CCAACTGAAGCACAAGTTAAAGATATTGCACAGTGGTTACTAGTTGCTCATAAGGACTCTACAGGTTTAAGTACCGACTGCCTTGCGGATGCTGGTTATCCTGGTGCGGCTTTACTGGGAGATGCTGTTTGTGGCATGGCTACTGCGAGAATTACTTCCAAGGATTTTCTATTCTGGTTCAGGTCTCACACAGCTAAGGAAGTCAAGTGGGGAGGTGCTAAGCATCATCCAGATGATAAAGATGATGGAGGAAAAATGCACCCACGATCTTCATTTAATGCCTTTCTTGAAGTGGTTAAAAGCAGAAGTTTGCCATGGGAGATTCCGGAGATTAATGCCATTCATTCTCTACAAATCATAATGAGAGAATCAATCCAAGAGAACGAAAACAGCTCTCTAAAAACTTTGACTACTTCTCAACAGAATGATGCTGATGGGCCAAGCATGGATGAGCTTAGTTCTGTGGCAATGGAAATGGTTAGATTGATTGAGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M6745" ref_strand="+" ref_description="SGN-M6745 C2_At1g29790 [cosii_markers]">
      <seq>ctgatttgcttcatcagtatatgagctacacaccctttagtctttgcccctcagattcttcagtagctgagtctcttattcttagagggtgtcaccctctacctaggaggcgctgtttttcaagaaccccttctagtatccccgcttctttgcctaaaacccctttttctactatccctgaaaaggccttgttgtggaataattacacttgtaagagcttttcttgtttgtctcagtctaatcccaacttgggatttgatatgaaagttgagcaatcaaaattcttggattttaagtcagatctagatctcccaattccacagtttcttcagctaactaagacctcaaagagtgttattaggctggcactcgatattgggggtggtacaggaacttttgctgcacaaatgaagctgcataatgtgactgttgtgacaacaacaatgaatcttggtgccccttatagtgagactgtggcacttaggggattggtgcctttacatgtacctttgcagcagaggctgccagtgtttgatggggtgctggatcttgtaagatgtggtcatgctgtgaataggtggattccagtgaccatgatggagttcttgctttttgatgttgatagagtgttgagggctggtggatgcctctggttggaccatttctttagtaaaagagcagatcttgagaaggtttttcaacccttgatctggaaattgaactacaagaaggtgaagtggacagtggctaataagaatgatgctagtggtgtgaagaatggggaagtttatttgacagctcttcttcagaagccgctttcgagatgaacatctagtccagataccactgctagatttgaatgatcatttgatgccaaatgctgctatgttgtgtcaagatattctcttcttctcgaggtagagaaatgcgattagtctgcatttggagcgagaatgatccaaacaatagaaagctgtgtgcaccacagaaatacagtttgcagcaaacaacagtagctgctctaatagatagctatttcctttcattcatttgtcagttttggtgtaatctttactgatttcgaaactaaacaatagtagagataacagaactgcaagtttaaaaaagtgattattataaatgtaaagatattgcaggaaagtgaaaaagaacttgctgagttctttgcttcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="129321" stop="125728"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129021" g_stop="128182" g_length="840"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="840" r_length="840" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="128181" i_stop="126379" i_length="1803">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126378" g_stop="126029" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="841" r_stop="1192" r_length="352" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1193" polyA_stop="1203"/>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-M6745" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1190</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-M6745" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129021" e_stop="128182"/>
          <exon e_start="126378" e_stop="126029"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGATTTGCTTCATCAGTATATGAGCTACACACCCTTTAGTCTTTGCCCCTCAGATTCTTCAGTAGCTGAGTCTCTTATTCTTAGAGGGTGTCACCCTCTACCTAGGAGGCGCTGTTTTTCAAGAACCCCTTCTAGTATCCCCGCTTCTTTGCCTAAAACCCCTTTTTCTACTATCCCTGAAAAGGCCTTGTTGTGGAATAATTACACTTGTAAGAGCTTTTCTTGTTTGTCTCAGTCTAATCCCAACTTGGGATTTGATATGAAAGTTGAGCAATCAAGATTCTTGGATTTTAAGTCAGATCTAGATCTCCCAATTCCACAGTTTCTTCAGCTAACTAAGACCTCAAAGAGTGTTATTAGGCTGGCACTCGATATTGGGGGTGGTACAGGAACTTTTGCTGCACAAATGAAGCTGCATAATGTGACTGTTGTGACAACAACAATGAATCTTGGTGCCCCTTATAGTGAGACTGTGGCACTTAGGGGATTGGTGCCTTTACATGTACCTTTGCAGCAGAGGCTGCCAGTGTTTGATGGGGTGCTGGATCTTGTAAGATGTGGTCATGCTGTGAATAGGTGGATTCCAGTGACCATGATGGAGTTCTTGCTTTTTGATGTTGATAGAGTGTTGAGGGCTGGTGGATACCTCTGGTTGGACCATTTCTTTAGTAAAAGAGCAGATCTTGAGAAGGTTTTTCAACCCTTGATCTGGAAATTGAACTACAAGAAGGTGAAGTGGACAGTGGCTAATAAGAATGATGCTAGTGGTGTGAAGAATGGGGAAGTTTATTTGACAGCTCTTCTTCAGAAGCCGCTTTCGAGATGAACATCTAGTCCAGGTAACCTCATAGACTCTCTGAAAATGAGATCATATATTGTTTTAGTGGATGGATTATAAACATTGCTAGTAGTGATAGATCTAAAGTAGTTTAGTACTCCTATTACTTTTGGCTTGGCACTGAACTAATGAAAGCACCAATAGACATAATCAAAATCTCCTCGCGTGACTTTGAGAAGCCAAATTATGTCCAAGTAATGCTTGTTCAAAGTTTTATGTCTTTATTATCTACTGCAAATGTAACACTGTAGTAAATATGCACCTTCACTGGTGCACATTTCATATTTGCTAAAAGAAATTAATGGTTTTTGCTTCACTCTCGGCTCACCCTTTTGTTTTTAATAACAATTGTAGCTTGGGATTGAAAGAGCAGATTTCAAATTTTCCATGTTGTGTAGAGATTTAGTGTCCGTTTGGATTAATTTGTGGCTTTTGGCTTATAAGTCATAAGCCAAAAGCCAATCCAAACAGGCCCTTAGTTGATCCAAAGTAAATAATGCTGTATTCTTCATACCTTCTGAGGCTGCCATGTCCCATAGGTATCCAGCTTTAAAGTTGTTTTAAGATGAGCCTGCTACAGATTTGTTTCTCGATACACTATATTATCCATTAAGTGGAGATCCTTCGTAGTAAAAGCCTTTTTTCAGTAAGAACTGTTACCTCTCTGGTGCATTTCTGATGCATTTAGCCTTAGACGGGGAAACTGGCTACTTGAAGTGGAATAATTCAGGTTTGTGGTATGTTTCCTTCTTGTCAGAGTTCTACACTGTCCAAAGTCCTGCGGTGATATCTTTCAATGTACACTCATGTCATTCCAAGAATCTATCTACTTTCCTCTTGCACTATGCTGTCAAGATAATCCACCTAAATGTGACTCTCAATAAGGATCCCTGTCCTGTCCCTTAACTCCAGCATAAACTTATATCATTTGTTGATCCAATTGCGCTTTTGGTATATAATTTGTAAGGTCCTTTATTCTTTATTCTAGTTTATTGAACTATGCATATAGTGCCAGAACATAAAAATGATCTGCAAAAATGACAACTTCCCTTGACAATGTAATTTTATGTCAACAAGAACCCATGTGGCTTAAACACCATTTTCTGATGTACTGAGGGTTCAAAGTCTATTTTCATCTACAAAATATTTCTAGTGGCGATAAGATTCATCAATTAGCTCCAAAATCTACCCATTACCTCTTTATACATATATTGGTAATTTGTATGCATGTTAGTAGTAACCAATAGGTTTCAGATTCAACTGGATGGTCTTCATTCTCCAAAAACTATTCTTAGATGAAGAGTTTTTGATCTCAGAAGGCTGATAAATGGGTCATGTGCAAAGCACTTGACTTTTTTCATCCAAAAATTAAATCCATGTAGAGATGGATTCCATTTAATTAAACACAGTACCTTCCTGCAATTGGTGTCCTATGAATTATCCAACTCAAAGTGATCATTAAGACCCTTAATGAAGGCCATTCTGAATGATTGTTGACAAATTCCCCATGTATAACTGTCACGTGGTGTTGCGTTTCCCGTCTAGCTTGTATGTCAACTGCATGTGATGCACTTTGTTCGCAAACCTGATTGATAACAGCACAGCCAATATAATTCACATTGATTTGACTGTTATAACACAAATCATTATTTCTAATATTTTGATCGGAAATGATTTGGCGCTCTAAACTGATTTGCTCATTAGATTGATTGAATCCTTCTGAAAGCTGCTCAAGTAGATTATCTTTCTCCATCTTTTTCGAGGTTGTTTTAAAATTTCAGCTTTTGCTGTTGTTATTTTGCAGATACCACTGCTAGATTTGAATGATCATTTGATGCCAAATGCTGCTATGTTGTGTCAAGATATTCTCTTCTTCTCGAGGTAGAGAAATGCGATTAGTCTGCATTTGGAGCGAGAATGATCCAAACAATAGAAAGCTGTGTGCACCACAGAAATACAGTTTGCAGCAAACAACAGTAGCTGCTCTAATAGATAGCTATTTCCTTTCATTCATTTGTCAGTTTTGGTGTAATCTTTACTGATTTCGAAACTAAACAATAGTAGAGATAACAGAACTGCAAGTTTAA--AAGTGATTATTATAAATGTAAAGATATTGCAGGAAAGTGAAAAAGAACTTGCTGAGTTCTTTGCTTC</genome_strand>
        <mrna_strand>CTGATTTGCTTCATCAGTATATGAGCTACACACCCTTTAGTCTTTGCCCCTCAGATTCTTCAGTAGCTGAGTCTCTTATTCTTAGAGGGTGTCACCCTCTACCTAGGAGGCGCTGTTTTTCAAGAACCCCTTCTAGTATCCCCGCTTCTTTGCCTAAAACCCCTTTTTCTACTATCCCTGAAAAGGCCTTGTTGTGGAATAATTACACTTGTAAGAGCTTTTCTTGTTTGTCTCAGTCTAATCCCAACTTGGGATTTGATATGAAAGTTGAGCAATCAAAATTCTTGGATTTTAAGTCAGATCTAGATCTCCCAATTCCACAGTTTCTTCAGCTAACTAAGACCTCAAAGAGTGTTATTAGGCTGGCACTCGATATTGGGGGTGGTACAGGAACTTTTGCTGCACAAATGAAGCTGCATAATGTGACTGTTGTGACAACAACAATGAATCTTGGTGCCCCTTATAGTGAGACTGTGGCACTTAGGGGATTGGTGCCTTTACATGTACCTTTGCAGCAGAGGCTGCCAGTGTTTGATGGGGTGCTGGATCTTGTAAGATGTGGTCATGCTGTGAATAGGTGGATTCCAGTGACCATGATGGAGTTCTTGCTTTTTGATGTTGATAGAGTGTTGAGGGCTGGTGGATGCCTCTGGTTGGACCATTTCTTTAGTAAAAGAGCAGATCTTGAGAAGGTTTTTCAACCCTTGATCTGGAAATTGAACTACAAGAAGGTGAAGTGGACAGTGGCTAATAAGAATGATGCTAGTGGTGTGAAGAATGGGGAAGTTTATTTGACAGCTCTTCTTCAGAAGCCGCTTTCGAGATGAACATCTAGTCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCACTGCTAGATTTGAATGATCATTTGATGCCAAATGCTGCTATGTTGTGTCAAGATATTCTCTTCTTCTCGAGGTAGAGAAATGCGATTAGTCTGCATTTGGAGCGAGAATGATCCAAACAATAGAAAGCTGTGTGCACCACAGAAATACAGTTTGCAGCAAACAACAGTAGCTGCTCTAATAGATAGCTATTTCCTTTCATTCATTTGTCAGTTTTGGTGTAATCTTTACTGATTTCGAAACTAAACAATAGTAGAGATAACAGAACTGCAAGTTTAAAAAAGTGATTATTATAAATGTAAAGATATTGCAGGAAAGTGAAAAAGAACTTGCTGAGTTCTTTGCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M6745-2" ref_strand="+" ref_description="SGN-M6745-2 C2_At1g29790-2 [cosii_markers]">
      <seq>gcaacataaagcacaaaactttatgcttttcttgagcttttacactctctaaagtgtatcagcaatcaagaaaatattgcaggagccacaaaaatgggattcacaatgggtctaaatttgcttcttttggtagctatggtggctaccaacattctttctttgtatcatctctcttccaatatccaatccaagccccctgttgctccacctgttcctgaccaccttctgcatcagcttcagaccatacgcgccaccattaaccacctcacgcgcctccagcctccagctcctccatctgctaaagctaagaaatctacagttaccatcccttctgatctccttctttacactcatttatcacctattgcttcttcttgtaaagacaatcctgatttgcttcatcagtacatgagctacacaccctttagtctttgcccctcagattcttcagtagctgagtctcttatacttagagggtgtcaccctcttccaaggaggcgctgtttttcaagaaccccttctagtatccctacttctctgcctaaaacccctttttctactatccctgaaaaggccttgttgtggaataattacagttgtaagagcttttcttgtttgtctcagtctaatcccaacttgggatttgatatgaaagttgagcaatcaagattcttggattttaagtcagatctagatctcccaattccacagtttcttcagctcactaagacctcaaagagtgttattaggctggcacttgatattggtggtggcacaggaacttttgctgcacaaatgaagctgcataatgtaactgttgtgactacaacaatgaatctcggtgccccttatagtgagactgtggcacttaggggattggtgcctttacatgtgcctttgcagcagaagctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="129709" stop="128199"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129409" g_stop="128498" g_length="912"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="912" r_length="912" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-M6745-2" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>912</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-M6745-2" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129409" e_stop="128498"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAACATAAAGCACAAAACTTTATGCTTTTCTTGAGCTTTTACACTCTCTAAAGTGTATCAGCAATCAAGAAAATTTTGCAGGAGCCACAAAAATGGGATTCACAATGGGTCTAAATTTGCTTCTTTTGGTAGCTATGGTGGCTACCAACATTCTTTCTTTGTATCATCTCTCTTCCAACATCCAATCCAAGCCCCCTGTTGCTCCACCTGTTCCTGACCACCTTCTGCATCAGCTTCAGACTATACGCGCCACTATTAACCACCTCACGCGCCTCCAGCCTCCAGCTCCACCATCTGGTAAAGCTAAGAAATCTACAGTAACGATCCCTTCTGATCTCCTTCTTTACACTCATTTATCACCTATTGCTTCTTCTTGTAAAGACAATCCTGATTTGCTTCATCAGTATATGAGCTACACACCCTTTAGTCTTTGCCCCTCAGATTCTTCAGTAGCTGAGTCTCTTATTCTTAGAGGGTGTCACCCTCTACCTAGGAGGCGCTGTTTTTCAAGAACCCCTTCTAGTATCCCCGCTTCTTTGCCTAAAACCCCTTTTTCTACTATCCCTGAAAAGGCCTTGTTGTGGAATAATTACACTTGTAAGAGCTTTTCTTGTTTGTCTCAGTCTAATCCCAACTTGGGATTTGATATGAAAGTTGAGCAATCAAGATTCTTGGATTTTAAGTCAGATCTAGATCTCCCAATTCCACAGTTTCTTCAGCTAACTAAGACCTCAAAGAGTGTTATTAGGCTGGCACTCGATATTGGGGGTGGTACAGGAACTTTTGCTGCACAAATGAAGCTGCATAATGTGACTGTTGTGACAACAACAATGAATCTTGGTGCCCCTTATAGTGAGACTGTGGCACTTAGGGGATTGGTGCCTTTACATGTACCTTTGCAGCAGAGGCTG</genome_strand>
        <mrna_strand>GCAACATAAAGCACAAAACTTTATGCTTTTCTTGAGCTTTTACACTCTCTAAAGTGTATCAGCAATCAAGAAAATATTGCAGGAGCCACAAAAATGGGATTCACAATGGGTCTAAATTTGCTTCTTTTGGTAGCTATGGTGGCTACCAACATTCTTTCTTTGTATCATCTCTCTTCCAATATCCAATCCAAGCCCCCTGTTGCTCCACCTGTTCCTGACCACCTTCTGCATCAGCTTCAGACCATACGCGCCACCATTAACCACCTCACGCGCCTCCAGCCTCCAGCTCCTCCATCTGCTAAAGCTAAGAAATCTACAGTTACCATCCCTTCTGATCTCCTTCTTTACACTCATTTATCACCTATTGCTTCTTCTTGTAAAGACAATCCTGATTTGCTTCATCAGTACATGAGCTACACACCCTTTAGTCTTTGCCCCTCAGATTCTTCAGTAGCTGAGTCTCTTATACTTAGAGGGTGTCACCCTCTTCCAAGGAGGCGCTGTTTTTCAAGAACCCCTTCTAGTATCCCTACTTCTCTGCCTAAAACCCCTTTTTCTACTATCCCTGAAAAGGCCTTGTTGTGGAATAATTACAGTTGTAAGAGCTTTTCTTGTTTGTCTCAGTCTAATCCCAACTTGGGATTTGATATGAAAGTTGAGCAATCAAGATTCTTGGATTTTAAGTCAGATCTAGATCTCCCAATTCCACAGTTTCTTCAGCTCACTAAGACCTCAAAGAGTGTTATTAGGCTGGCACTTGATATTGGTGGTGGCACAGGAACTTTTGCTGCACAAATGAAGCTGCATAATGTAACTGTTGTGACTACAACAATGAATCTCGGTGCCCCTTATAGTGAGACTGTGGCACTTAGGGGATTGGTGCCTTTACATGTGCCTTTGCAGCAGAAGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>4</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="15382" PGL_stop="5512"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15382" e_stop="15168"/>
            <exon e_start="13373" e_stop="13237"/>
            <exon e_start="13145" e_stop="13011"/>
            <exon e_start="12597" e_stop="12487"/>
            <exon e_start="12376" e_stop="12110"/>
            <exon e_start="10083" e_stop="9884"/>
            <exon e_start="9254" e_stop="8972"/>
            <exon e_start="8598" e_stop="8488"/>
            <exon e_start="7749" e_stop="7558"/>
            <exon e_start="6000" e_stop="5512"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.880" e_score="0.967"/>
          <exon-intron don_prob="0.017" acc_prob="0.922" e_score="0.956"/>
          <exon-intron don_prob="0.584" acc_prob="0.943" e_score="0.978"/>
          <exon-intron don_prob="0.985" acc_prob="0.880" e_score="0.982"/>
          <exon-intron don_prob="0.992" acc_prob="0.996" e_score="0.989"/>
          <exon-intron don_prob="0.986" acc_prob="0.945" e_score="1.000"/>
          <exon-intron don_prob="0.644" acc_prob="0.999" e_score="0.972"/>
          <exon-intron don_prob="0.936" acc_prob="0.962" e_score="0.991"/>
          <exon-intron don_prob="0.815" acc_prob="0.952" e_score="0.984"/>
          <exon-only e_score="0.959"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.967">
            <gDNA_exon_boundary e_start="15382" e_stop="15168" e_length="215"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.880">
            <gDNA_intron_boundary i_start="15167" i_stop="13374" i_length="1794"/>
          </intron>
          <exon e_serial="2" e_score="0.956">
            <gDNA_exon_boundary e_start="13373" e_stop="13237" e_length="137"/>
          </exon>
          <intron i_serial="2" don_prob="0.017" acc_prob="0.922">
            <gDNA_intron_boundary i_start="13236" i_stop="13146" i_length="91"/>
          </intron>
          <exon e_serial="3" e_score="0.978">
            <gDNA_exon_boundary e_start="13145" e_stop="13011" e_length="135"/>
          </exon>
          <intron i_serial="3" don_prob="0.584" acc_prob="0.943">
            <gDNA_intron_boundary i_start="13010" i_stop="12598" i_length="413"/>
          </intron>
          <exon e_serial="4" e_score="0.982">
            <gDNA_exon_boundary e_start="12597" e_stop="12487" e_length="111"/>
          </exon>
          <intron i_serial="4" don_prob="0.985" acc_prob="0.880">
            <gDNA_intron_boundary i_start="12486" i_stop="12377" i_length="110"/>
          </intron>
          <exon e_serial="5" e_score="0.989">
            <gDNA_exon_boundary e_start="12376" e_stop="12110" e_length="267"/>
          </exon>
          <intron i_serial="5" don_prob="0.992" acc_prob="0.996">
            <gDNA_intron_boundary i_start="12109" i_stop="10084" i_length="2026"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="10083" e_stop="9884" e_length="200"/>
          </exon>
          <intron i_serial="6" don_prob="0.986" acc_prob="0.945">
            <gDNA_intron_boundary i_start="9883" i_stop="9255" i_length="629"/>
          </intron>
          <exon e_serial="7" e_score="0.972">
            <gDNA_exon_boundary e_start="9254" e_stop="8972" e_length="283"/>
          </exon>
          <intron i_serial="7" don_prob="0.644" acc_prob="0.999">
            <gDNA_intron_boundary i_start="8971" i_stop="8599" i_length="373"/>
          </intron>
          <exon e_serial="8" e_score="0.991">
            <gDNA_exon_boundary e_start="8598" e_stop="8488" e_length="111"/>
          </exon>
          <intron i_serial="8" don_prob="0.936" acc_prob="0.962">
            <gDNA_intron_boundary i_start="8487" i_stop="7750" i_length="738"/>
          </intron>
          <exon e_serial="9" e_score="0.984">
            <gDNA_exon_boundary e_start="7749" e_stop="7558" e_length="192"/>
          </exon>
          <intron i_serial="9" don_prob="0.815" acc_prob="0.952">
            <gDNA_intron_boundary i_start="7557" i_stop="6001" i_length="1557"/>
          </intron>
          <exon e_serial="10" e_score="0.959">
            <gDNA_exon_boundary e_start="6000" e_stop="5512" e_length="489"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15382" stop="15168"/>
              <exon start="13373" stop="13237"/>
              <exon start="13145" stop="13011"/>
              <exon start="12597" stop="12487"/>
              <exon start="12376" stop="12110"/>
              <exon start="10083" stop="9884"/>
              <exon start="9254" stop="8972"/>
              <exon start="8598" stop="8488"/>
              <exon start="7749" stop="7558"/>
              <exon start="6000" stop="5512"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M8973" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTCTTTCTTTCTTGGATGTTATCAGAAAACATGCAAGGCTCCTCTGCTCTTTCCTGTTCTTCAAATTCTATCTCTGCTCCAGTTGGTCTTTGTTGTTCTCAAAGATTAACACTTCCTTTTCGAAATCAAAGAATTGGGTTTCTGGAAAATCCATCAAGCTTGAAGATTTTCCATTTTCACCGAAACACTACCCTCCCTTTGCTGAACTGCACTG : CTACGGAAGAGATCGTGGAGGCTAGTGAAACAGAGGGATTATTTGTTGAAACTGGGTACATATATAGTGTTCATGGGCTTCAAGGTGAGGTTCGAGTAAAAGCGACAACTGATTTCCCTGAATTGCGATTTTCCCAG : CCAGGAAGGCGATGGTTGAGGCAGCAAGTTACAGGGAGAGATATGATTCAAGAAATCGAACTAGTGGAGGGAAGAGGTCATCCAGGACAGAAGAGTTGGATACTTAAATTCCACGAGATTAACACAATTGAGCAG : GCCCAAAAACTTGTGGGGTCGGCCTTACTGGTGAAGAATGAAGATAGACCAATCCTGGAGGAAGGTGAATTTTACACCCCTGACCTTGTTGGGATGAAAGTATTTCTAAAG : GAAACTAGAGAACTGGTAGGAACTGTTATTAATGTTTTCAACAGTGGAGCTAGTGATCTCCTACATGTTGAGCTTCTACCGAATCAAAATGCAAGACCACAGTTGGAAGGAAGTGCATCTGGTCCTCTTGTATGGGTCCCTTTCGTTGAAGCAATTGTTCCAAATATTGATTTGAGTAAAAGGGAAATGCTGATTACACCTCCAAAGGGTCTTTTAGAATTGAACATCCGTGCAGATGAGAGGTCCAAGAAAGAGAGGCGACAGCTT : GAATGGAAAGAGAGAAAAAAGTCTCAGAAACGCCTCATAGCAGCCAAGAAAATATTGCATGAAATGGAACAAGATCATATATTTCATGGTTTCAGATATGGAGAGAAAAACCAAAGGAGCTTCCTTGCAAATCAGATAGTTGATGTAAATTCCATCTTGCTTCAGCATGCCTTGCAGAATAAAAAGATTCCATATAAGAG : ATGGAGCTTTCCAGACTTTGTTAATGCTTTACAAGTAAACAATACATTAAAACTATCCAAAGAATTCTTCTCTAAAGAAAATGTTGAACACTCAAGCATTGTTTCTAAAGTTCAAGAGCAGGGTCATTGCCTCATATCTTCTGGCAAGGTTGCGATTGTTTTAGCTTTGACAGAAACTAAGCTTCTTGGAACGTCTTTTATTCCTGAACCTGCTAAGCCTCATGAGGAGATTGCTTATCTGCACGTCAAGGGATTGCTAAATGACAGCCACAGATTGCTCAAG : ATGGAGGACCGGCCCTCTGTACCTCTTATAGTTGTGTGTCCTGCTGAATCTATTGAATATCTCAAACAATTGTTCATGGATCATGACTACTTCTCTTTCGACTCTGAGAAG : GTTTGGTTCTTGGAAGAAGAGAAGCTCCCTGTTGTCAGTGCTTCACAGGAAGAAGAAAACAAACATAAAATTTTAATGAAATCACCATGGGAGATACTCCAAAGACCAGCTGGATCTGCAGGAATTGTTACTGTGCTTTCATCACAGAACCTACTAGAGCATTTACATGTGATGGGTGTGGAGTATATTCAG : GTATGTTCTGGCAATCAAGAATTCATTAATGGGGAGATGCTACTTGGTTTTACCAAGTCTCGTGAAGCCAATGCGGGGATCCAAGTCTTCAGGGATGTTGGCTACTTGGAAGAACACTTCAACATAGTATTTTCCATTGATTTTGCAAGGAAATTGACTAAGAAGATAGACAAACTTCAATTTGAAGCCATTTTAAAGCCAAATCAGTATGTGCAGATGGTAGAAAAAGAATGGGTTGATGTCATCCCCTCCTCACCCAGCTCGTATGAGTTCCATTCATCGATATATAGCTGCTTGAACTCTTGTCCTCCTAGTAAGGTTTGTCTGGTAGACATTACTGCATGATATTGATATCTGCATACATGTATATGACTCCAACTTAGCCTCAAAAGCATAGAAGATGTTATAATAACACCAGTATCTTTGTTCTTAATATCACACCCTTCTTTTCTTTTTCTTCTGTTTCCTTATTAATGTTTCAACTTCATT</gDNA_template>
            <first_frame> F  L  S  F  L  D  V  I  R  K  H  A  R  L  L  C  S  F  L  F  F  K  F  Y  L  C  S  S  W  S  L  L  F  S  K  I  N  T  S  F  S  K  S  K  N  W  V  S  G  K  S  I  K  L  E  D  F  P  F  S  P  K  H  Y  P  P  F  A  E  L  H  C :   Y  G  R  D  R  G  G  *  *  N  R  G  I  I  C  *  N  W  V  H  I  *  C  S  W  A  S  R  *  G  S  S  K  S  D  N  *  F  P  *  I  A  I  F  P   : A  R  K  A  M  V  E  A  A  S  Y  R  E  R  Y  D  S  R  N  R  T  S  G  G  K  R  S  S  R  T  E  E  L  D  T  *  I  P  R  D  *  H  N  *  A   : G  P  K  T  C  G  V  G  L  T  G  E  E  *  R  *  T  N  P  G  G  R  *  I  L  H  P  *  P  C  W  D  E  S  I  S  K   : G  N  *  R  T  G  R  N  C  Y  *  C  F  Q  Q  W  S  *  *  S  P  T  C  *  A  S  T  E  S  K  C  K  T  T  V  G  R  K  C  I  W  S  S  C  M  G  P  F  R  *  S  N  C  S  K  Y  *  F  E  *  K  G  N  A  D  Y  T  S  K  G  S  F  R  I  E  H  P  C  R  *  E  V  Q  E  R  E  A  T  A   : *  M  E  R  E  K  K  V  S  E  T  P  H  S  S  Q  E  N  I  A  *  N  G  T  R  S  Y  I  S  W  F  Q  I  W  R  E  K  P  K  E  L  P  C  K  S  D  S  *  C  K  F  H  L  A  S  A  C  L  A  E  *  K  D  S  I  *  E  :  M  E  L  S  R  L  C  *  C  F  T  S  K  Q  Y  I  K  T  I  Q  R  I  L  L  *  R  K  C  *  T  L  K  H  C  F  *  S  S  R  A  G  S  L  P  H  I  F  W  Q  G  C  D  C  F  S  F  D  R  N  *  A  S  W  N  V  F  Y  S  *  T  C  *  A  S  *  G  D  C  L  S  A  R  Q  G  I  A  K  *  Q  P  Q  I  A  Q   : D  G  G  P  A  L  C  T  S  Y  S  C  V  S  C  *  I  Y  *  I  S  Q  T  I  V  H  G  S  *  L  L  L  F  R  L  *  E   : G  L  V  L  G  R  R  E  A  P  C  C  Q  C  F  T  G  R  R  K  Q  T  *  N  F  N  E  I  T  M  G  D  T  P  K  T  S  W  I  C  R  N  C  Y  C  A  F  I  T  E  P  T  R  A  F  T  C  D  G  C  G  V  Y  S   : G  M  F  W  Q  S  R  I  H  *  W  G  D  A  T  W  F  Y  Q  V  S  *  S  Q  C  G  D  P  S  L  Q  G  C  W  L  L  G  R  T  L  Q  H  S  I  F  H  *  F  C  K  E  I  D  *  E  D  R  Q  T  S  I  *  S  H  F  K  A  K  S  V  C  A  D  G  R  K  R  M  G  *  C  H  P  L  L  T  Q  L  V  *  V  P  F  I  D  I  *  L  L  E  L  L  S  S  *  *  G  L  S  G  R  H  Y  C  M  I  L  I  S  A  Y  M  Y  M  T  P  T  *  P  Q  K  H  R  R  C  Y  N  N  T  S  I  F  V  L  N  I  T  P  F  F  S  F  S  S  V  S  L  L  M  F  Q  L  H  </first_frame>
            <second_frame>  F  F  L  S  W  M  L  S  E  N  M  Q  G  S  S  A  L  S  C  S  S  N  S  I  S  A  P  V  G  L  C  C  S  Q  R  L  T  L  P  F  R  N  Q  R  I  G  F  L  E  N  P  S  S  L  K  I  F  H  F  H  R  N  T  T  L  P  L  L  N  C  T   : A  T  E  E  I  V  E  A  S  E  T  E  G  L  F  V  E  T  G  Y  I  Y  S  V  H  G  L  Q  G  E  V  R  V  K  A  T  T  D  F  P  E  L  R  F  S  Q  :  P  G  R  R  W  L  R  Q  Q  V  T  G  R  D  M  I  Q  E  I  E  L  V  E  G  R  G  H  P  G  Q  K  S  W  I  L  K  F  H  E  I  N  T  I  E  Q  :  A  Q  K  L  V  G  S  A  L  L  V  K  N  E  D  R  P  I  L  E  E  G  E  F  Y  T  P  D  L  V  G  M  K  V  F  L  K  :  E  T  R  E  L  V  G  T  V  I  N  V  F  N  S  G  A  S  D  L  L  H  V  E  L  L  P  N  Q  N  A  R  P  Q  L  E  G  S  A  S  G  P  L  V  W  V  P  F  V  E  A  I  V  P  N  I  D  L  S  K  R  E  M  L  I  T  P  P  K  G  L  L  E  L  N  I  R  A  D  E  R  S  K  K  E  R  R  Q  L  :  E  W  K  E  R  K  K  S  Q  K  R  L  I  A  A  K  K  I  L  H  E  M  E  Q  D  H  I  F  H  G  F  R  Y  G  E  K  N  Q  R  S  F  L  A  N  Q  I  V  D  V  N  S  I  L  L  Q  H  A  L  Q  N  K  K  I  P  Y  K  R :   W  S  F  P  D  F  V  N  A  L  Q  V  N  N  T  L  K  L  S  K  E  F  F  S  K  E  N  V  E  H  S  S  I  V  S  K  V  Q  E  Q  G  H  C  L  I  S  S  G  K  V  A  I  V  L  A  L  T  E  T  K  L  L  G  T  S  F  I  P  E  P  A  K  P  H  E  E  I  A  Y  L  H  V  K  G  L  L  N  D  S  H  R  L  L  K  :  M  E  D  R  P  S  V  P  L  I  V  V  C  P  A  E  S  I  E  Y  L  K  Q  L  F  M  D  H  D  Y  F  S  F  D  S  E  K  :  V  W  F  L  E  E  E  K  L  P  V  V  S  A  S  Q  E  E  E  N  K  H  K  I  L  M  K  S  P  W  E  I  L  Q  R  P  A  G  S  A  G  I  V  T  V  L  S  S  Q  N  L  L  E  H  L  H  V  M  G  V  E  Y  I  Q  :  V  C  S  G  N  Q  E  F  I  N  G  E  M  L  L  G  F  T  K  S  R  E  A  N  A  G  I  Q  V  F  R  D  V  G  Y  L  E  E  H  F  N  I  V  F  S  I  D  F  A  R  K  L  T  K  K  I  D  K  L  Q  F  E  A  I  L  K  P  N  Q  Y  V  Q  M  V  E  K  E  W  V  D  V  I  P  S  S  P  S  S  Y  E  F  H  S  S  I  Y  S  C  L  N  S  C  P  P  S  K  V  C  L  V  D  I  T  A  *  Y  *  Y  L  H  T  C  I  *  L  Q  L  S  L  K  S  I  E  D  V  I  I  T  P  V  S  L  F  L  I  S  H  P  S  F  L  F  L  L  F  P  Y  *  C  F  N  F  I </second_frame>
            <third_frame>   S  F  F  L  G  C  Y  Q  K  T  C  K  A  P  L  L  F  P  V  L  Q  I  L  S  L  L  Q  L  V  F  V  V  L  K  D  *  H  F  L  F  E  I  K  E  L  G  F  W  K  I  H  Q  A  *  R  F  S  I  F  T  E  T  L  P  S  L  C  *  T  A  L  :  L  R  K  R  S  W  R  L  V  K  Q  R  D  Y  L  L  K  L  G  T  Y  I  V  F  M  G  F  K  V  R  F  E  *  K  R  Q  L  I  S  L  N  C  D  F  P  S :   Q  E  G  D  G  *  G  S  K  L  Q  G  E  I  *  F  K  K  S  N  *  W  R  E  E  V  I  Q  D  R  R  V  G  Y  L  N  S  T  R  L  T  Q  L  S  R :   P  K  N  L  W  G  R  P  Y  W  *  R  M  K  I  D  Q  S  W  R  K  V  N  F  T  P  L  T  L  L  G  *  K  Y  F  *  R :   K  L  E  N  W  *  E  L  L  L  M  F  S  T  V  E  L  V  I  S  Y  M  L  S  F  Y  R  I  K  M  Q  D  H  S  W  K  E  V  H  L  V  L  L  Y  G  S  L  S  L  K  Q  L  F  Q  I  L  I  *  V  K  G  K  C  *  L  H  L  Q  R  V  F  *  N  *  T  S  V  Q  M  R  G  P  R  K  R  G  D  S  L :   N  G  K  R  E  K  S  L  R  N  A  S  *  Q  P  R  K  Y  C  M  K  W  N  K  I  I  Y  F  M  V  S  D  M  E  R  K  T  K  G  A  S  L  Q  I  R  *  L  M  *  I  P  S  C  F  S  M  P  C  R  I  K  R  F  H  I  R   : D  G  A  F  Q  T  L  L  M  L  Y  K  *  T  I  H  *  N  Y  P  K  N  S  S  L  K  K  M  L  N  T  Q  A  L  F  L  K  F  K  S  R  V  I  A  S  Y  L  L  A  R  L  R  L  F  *  L  *  Q  K  L  S  F  L  E  R  L  L  F  L  N  L  L  S  L  M  R  R  L  L  I  C  T  S  R  D  C  *  M  T  A  T  D  C  S  R :   W  R  T  G  P  L  Y  L  L  *  L  C  V  L  L  N  L  L  N  I  S  N  N  C  S  W  I  M  T  T  S  L  S  T  L  R  R :   F  G  S  W  K  K  R  S  S  L  L  S  V  L  H  R  K  K  K  T  N  I  K  F  *  *  N  H  H  G  R  Y  S  K  D  Q  L  D  L  Q  E  L  L  L  C  F  H  H  R  T  Y  *  S  I  Y  M  *  W  V  W  S  I  F  R :   Y  V  L  A  I  K  N  S  L  M  G  R  C  Y  L  V  L  P  S  L  V  K  P  M  R  G  S  K  S  S  G  M  L  A  T  W  K  N  T  S  T  *  Y  F  P  L  I  L  Q  G  N  *  L  R  R  *  T  N  F  N  L  K  P  F  *  S  Q  I  S  M  C  R  W  *  K  K  N  G  L  M  S  S  P  P  H  P  A  R  M  S  S  I  H  R  Y  I  A  A  *  T  L  V  L  L  V  R  F  V  W  *  T  L  L  H  D  I  D  I  C  I  H  V  Y  D  S  N  L  A  S  K  A  *  K  M  L  *  *  H  Q  Y  L  C  S  *  Y  H  T  L  L  F  F  F  F  C  F  L  I  N  V  S  T  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15381" stop="15168"/>
                    <exon start="13373" stop="13237"/>
                    <exon start="13145" stop="13011"/>
                    <exon start="12597" stop="12487"/>
                    <exon start="12376" stop="12110"/>
                    <exon start="10083" stop="9884"/>
                    <exon start="9254" stop="8972"/>
                    <exon start="8598" stop="8488"/>
                    <exon start="7749" stop="7558"/>
                    <exon start="6000" stop="5656"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1992</number_coding_nucleotides>
                  <number_encoded_amino_acids>664</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFLSWMLSENMQGSSALSCSSNSISAPVGLCCSQRLTLPFRNQRIGFLENPSSLKIFHFHRNTTLPLLNCTATEEIVEASETEGLFVETGYIYSVHGLQGEVRVKATTDFPELRFSQPGRRWLRQQVTGRDMIQEIELVEGRGHPGQKSWILKFHEINTIEQAQKLVGSALLVKNEDRPILEEGEFYTPDLVGMKVFLKETRELVGTVINVFNSGASDLLHVELLPNQNARPQLEGSASGPLVWVPFVEAIVPNIDLSKREMLITPPKGLLELNIRADERSKKERRQLEWKERKKSQKRLIAAKKILHEMEQDHIFHGFRYGEKNQRSFLANQIVDVNSILLQHALQNKKIPYKRWSFPDFVNALQVNNTLKLSKEFFSKENVEHSSIVSKVQEQGHCLISSGKVAIVLALTETKLLGTSFIPEPAKPHEEIAYLHVKGLLNDSHRLLKMEDRPSVPLIVVCPAESIEYLKQLFMDHDYFSFDSEKVWFLEEEKLPVVSASQEEENKHKILMKSPWEILQRPAGSAGIVTVLSSQNLLEHLHVMGVEYIQVCSGNQEFINGEMLLGFTKSREANAGIQVFRDVGYLEEHFNIVFSIDFARKLTKKIDKLQFEAILKPNQYVQMVEKEWVDVIPSSPSSYEFHSSIYSCLNSCPPSKVCLVDITA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="35445" PGL_stop="34952"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="35445" e_stop="34952"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="35445" e_stop="34952" e_length="494"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35445" stop="34952"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M3002" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCAACTGAAGCACAAGTTAAAGATATTGCACAGTGGTTACTAGTTGCTCATAAGGACTCTACAGGTTTAAGTACTGACTGCCTTGCGGATGCTGGTTATCCTGGTGCGGCTTTACTGGGAGATGCTGTTTGTGGCATGGCTACTGCGAGAATTACTTCCAAGGATTTTCTATTCTGGTTCAGGTCTCACACAGCTAAGGAAGTCAAGTGGGGAGGTGCTAAGCATCATCCAGATGATAAAGATGATGGAGGAAAAATGCACCCACGATCTTCATTTAATGCCTTTCTTGAAGTGGTTAAAAGCAGAAGTTTGCCATGGGAGATTCCGGAGATTAATGCCATTCATTCTCTACAAATCATAATGAGAGAATCAATCCAAGAGAACGAAAACAGCTCTCTAAAAACTTTGACTACTTCTCAACAGAATGATGCTGATGGGCCAAGCATGGATGAGCTTAGTTCTGTGGCAATGGAAATGGTTAGATTGATTGAGAC</gDNA_template>
            <first_frame> P  T  E  A  Q  V  K  D  I  A  Q  W  L  L  V  A  H  K  D  S  T  G  L  S  T  D  C  L  A  D  A  G  Y  P  G  A  A  L  L  G  D  A  V  C  G  M  A  T  A  R  I  T  S  K  D  F  L  F  W  F  R  S  H  T  A  K  E  V  K  W  G  G  A  K  H  H  P  D  D  K  D  D  G  G  K  M  H  P  R  S  S  F  N  A  F  L  E  V  V  K  S  R  S  L  P  W  E  I  P  E  I  N  A  I  H  S  L  Q  I  I  M  R  E  S  I  Q  E  N  E  N  S  S  L  K  T  L  T  T  S  Q  Q  N  D  A  D  G  P  S  M  D  E  L  S  S  V  A  M  E  M  V  R  L  I  E   </first_frame>
            <second_frame>  Q  L  K  H  K  L  K  I  L  H  S  G  Y  *  L  L  I  R  T  L  Q  V  *  V  L  T  A  L  R  M  L  V  I  L  V  R  L  Y  W  E  M  L  F  V  A  W  L  L  R  E  L  L  P  R  I  F  Y  S  G  S  G  L  T  Q  L  R  K  S  S  G  E  V  L  S  I  I  Q  M  I  K  M  M  E  E  K  C  T  H  D  L  H  L  M  P  F  L  K  W  L  K  A  E  V  C  H  G  R  F  R  R  L  M  P  F  I  L  Y  K  S  *  *  E  N  Q  S  K  R  T  K  T  A  L  *  K  L  *  L  L  L  N  R  M  M  L  M  G  Q  A  W  M  S  L  V  L  W  Q  W  K  W  L  D  *  L  R  </second_frame>
            <third_frame>   N  *  S  T  S  *  R  Y  C  T  V  V  T  S  C  S  *  G  L  Y  R  F  K  Y  *  L  P  C  G  C  W  L  S  W  C  G  F  T  G  R  C  C  L  W  H  G  Y  C  E  N  Y  F  Q  G  F  S  I  L  V  Q  V  S  H  S  *  G  S  Q  V  G  R  C  *  A  S  S  R  *  *  R  *  W  R  K  N  A  P  T  I  F  I  *  C  L  S  *  S  G  *  K  Q  K  F  A  M  G  D  S  G  D  *  C  H  S  F  S  T  N  H  N  E  R  I  N  P  R  E  R  K  Q  L  S  K  N  F  D  Y  F  S  T  E  *  C  *  W  A  K  H  G  *  A  *  F  C  G  N  G  N  G  *  I  D  *  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="35445" stop="34954"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>492</number_coding_nucleotides>
                  <number_encoded_amino_acids>164</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PTEAQVKDIAQWLLVAHKDSTGLSTDCLADAGYPGAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKDDGGKMHPRSSFNAFLEVVKSRSLPWEIPEINAIHSLQIIMRESIQENENSSLKTLTTSQQNDADGPSMDELSSVAMEMVRLIE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="129409" PGL_stop="126029"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="129409" e_stop="128182"/>
            <exon e_start="126378" e_stop="126029"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.985" acc_prob="0.999" e_score="0.970"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.970">
            <gDNA_exon_boundary e_start="129409" e_stop="128182" e_length="1228"/>
          </exon>
          <intron i_serial="1" don_prob="0.985" acc_prob="0.999">
            <gDNA_intron_boundary i_start="128181" i_stop="126379" i_length="1803"/>
          </intron>
          <exon e_serial="2" e_score="0.989">
            <gDNA_exon_boundary e_start="126378" e_stop="126029" e_length="350"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129409" stop="128498"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M6745-2" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129021" stop="128182"/>
              <exon start="126378" stop="126029"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M6745" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTAACATAAAGCACAAAACTTTATGCTTTTCTTGAGCTTTTACACTCTCTAAAGTGTATCAGCAATCAAGAAAATTTTGCAGGAGCCACAAAAATGGGATTCACAATGGGTCTAAATTTGCTTCTTTTGGTAGCTATGGTGGCTACCAACATTCTTTCTTTGTATCATCTCTCTTCCAACATCCAATCCAAGCCCCCTGTTGCTCCACCTGTTCCTGACCACCTTCTGCATCAGCTTCAGACTATACGCGCCACTATTAACCACCTCACGCGCCTCCAGCCTCCAGCTCCACCATCTGGTAAAGCTAAGAAATCTACAGTAACGATCCCTTCTGATCTCCTTCTTTACACTCATTTATCACCTATTGCTTCTTCTTGTAAAGACAATCCTGATTTGCTTCATCAGTATATGAGCTACACACCCTTTAGTCTTTGCCCCTCAGATTCTTCAGTAGCTGAGTCTCTTATTCTTAGAGGGTGTCACCCTCTACCTAGGAGGCGCTGTTTTTCAAGAACCCCTTCTAGTATCCCCGCTTCTTTGCCTAAAACCCCTTTTTCTACTATCCCTGAAAAGGCCTTGTTGTGGAATAATTACACTTGTAAGAGCTTTTCTTGTTTGTCTCAGTCTAATCCCAACTTGGGATTTGATATGAAAGTTGAGCAATCAAGATTCTTGGATTTTAAGTCAGATCTAGATCTCCCAATTCCACAGTTTCTTCAGCTAACTAAGACCTCAAAGAGTGTTATTAGGCTGGCACTCGATATTGGGGGTGGTACAGGAACTTTTGCTGCACAAATGAAGCTGCATAATGTGACTGTTGTGACAACAACAATGAATCTTGGTGCCCCTTATAGTGAGACTGTGGCACTTAGGGGATTGGTGCCTTTACATGTACCTTTGCAGCAGAGGCTGCCAGTGTTTGATGGGGTGCTGGATCTTGTAAGATGTGGTCATGCTGTGAATAGGTGGATTCCAGTGACCATGATGGAGTTCTTGCTTTTTGATGTTGATAGAGTGTTGAGGGCTGGTGGATACCTCTGGTTGGACCATTTCTTTAGTAAAAGAGCAGATCTTGAGAAGGTTTTTCAACCCTTGATCTGGAAATTGAACTACAAGAAGGTGAAGTGGACAGTGGCTAATAAGAATGATGCTAGTGGTGTGAAGAATGGGGAAGTTTATTTGACAGCTCTTCTTCAGAAGCCGCTTTCGAGATGAACATCTAGTCCAG : ATACCACTGCTAGATTTGAATGATCATTTGATGCCAAATGCTGCTATGTTGTGTCAAGATATTCTCTTCTTCTCGAGGTAGAGAAATGCGATTAGTCTGCATTTGGAGCGAGAATGATCCAAACAATAGAAAGCTGTGTGCACCACAGAAATACAGTTTGCAGCAAACAACAGTAGCTGCTCTAATAGATAGCTATTTCCTTTCATTCATTTGTCAGTTTTGGTGTAATCTTTACTGATTTCGAAACTAAACAATAGTAGAGATAACAGAACTGCAAGTTTAAAAGTGATTATTATAAATGTAAAGATATTGCAGGAAAGTGAAAAAGAACTTGCTGAGTTCTTTGCTTC</gDNA_template>
            <first_frame> V  T  *  S  T  K  L  Y  A  F  L  E  L  L  H  S  L  K  C  I  S  N  Q  E  N  F  A  G  A  T  K  M  G  F  T  M  G  L  N  L  L  L  L  V  A  M  V  A  T  N  I  L  S  L  Y  H  L  S  S  N  I  Q  S  K  P  P  V  A  P  P  V  P  D  H  L  L  H  Q  L  Q  T  I  R  A  T  I  N  H  L  T  R  L  Q  P  P  A  P  P  S  G  K  A  K  K  S  T  V  T  I  P  S  D  L  L  L  Y  T  H  L  S  P  I  A  S  S  C  K  D  N  P  D  L  L  H  Q  Y  M  S  Y  T  P  F  S  L  C  P  S  D  S  S  V  A  E  S  L  I  L  R  G  C  H  P  L  P  R  R  R  C  F  S  R  T  P  S  S  I  P  A  S  L  P  K  T  P  F  S  T  I  P  E  K  A  L  L  W  N  N  Y  T  C  K  S  F  S  C  L  S  Q  S  N  P  N  L  G  F  D  M  K  V  E  Q  S  R  F  L  D  F  K  S  D  L  D  L  P  I  P  Q  F  L  Q  L  T  K  T  S  K  S  V  I  R  L  A  L  D  I  G  G  G  T  G  T  F  A  A  Q  M  K  L  H  N  V  T  V  V  T  T  T  M  N  L  G  A  P  Y  S  E  T  V  A  L  R  G  L  V  P  L  H  V  P  L  Q  Q  R  L  P  V  F  D  G  V  L  D  L  V  R  C  G  H  A  V  N  R  W  I  P  V  T  M  M  E  F  L  L  F  D  V  D  R  V  L  R  A  G  G  Y  L  W  L  D  H  F  F  S  K  R  A  D  L  E  K  V  F  Q  P  L  I  W  K  L  N  Y  K  K  V  K  W  T  V  A  N  K  N  D  A  S  G  V  K  N  G  E  V  Y  L  T  A  L  L  Q  K  P  L  S  R  *  T  S  S  P   : D  T  T  A  R  F  E  *  S  F  D  A  K  C  C  Y  V  V  S  R  Y  S  L  L  L  E  V  E  K  C  D  *  S  A  F  G  A  R  M  I  Q  T  I  E  S  C  V  H  H  R  N  T  V  C  S  K  Q  Q  *  L  L  *  *  I  A  I  S  F  H  S  F  V  S  F  G  V  I  F  T  D  F  E  T  K  Q  *  *  R  *  Q  N  C  K  F  K  S  D  Y  Y  K  C  K  D  I  A  G  K  *  K  R  T  C  *  V  L  C  F </first_frame>
            <second_frame>  *  H  K  A  Q  N  F  M  L  F  L  S  F  Y  T  L  *  S  V  S  A  I  K  K  I  L  Q  E  P  Q  K  W  D  S  Q  W  V  *  I  C  F  F  W  *  L  W  W  L  P  T  F  F  L  C  I  I  S  L  P  T  S  N  P  S  P  L  L  L  H  L  F  L  T  T  F  C  I  S  F  R  L  Y  A  P  L  L  T  T  S  R  A  S  S  L  Q  L  H  H  L  V  K  L  R  N  L  Q  *  R  S  L  L  I  S  F  F  T  L  I  Y  H  L  L  L  L  L  V  K  T  I  L  I  C  F  I  S  I  *  A  T  H  P  L  V  F  A  P  Q  I  L  Q  *  L  S  L  L  F  L  E  G  V  T  L  Y  L  G  G  A  V  F  Q  E  P  L  L  V  S  P  L  L  C  L  K  P  L  F  L  L  S  L  K  R  P  C  C  G  I  I  T  L  V  R  A  F  L  V  C  L  S  L  I  P  T  W  D  L  I  *  K  L  S  N  Q  D  S  W  I  L  S  Q  I  *  I  S  Q  F  H  S  F  F  S  *  L  R  P  Q  R  V  L  L  G  W  H  S  I  L  G  V  V  Q  E  L  L  L  H  K  *  S  C  I  M  *  L  L  *  Q  Q  Q  *  I  L  V  P  L  I  V  R  L  W  H  L  G  D  W  C  L  Y  M  Y  L  C  S  R  G  C  Q  C  L  M  G  C  W  I  L  *  D  V  V  M  L  *  I  G  G  F  Q  *  P  *  W  S  S  C  F  L  M  L  I  E  C  *  G  L  V  D  T  S  G  W  T  I  S  L  V  K  E  Q  I  L  R  R  F  F  N  P  *  S  G  N  *  T  T  R  R  *  S  G  Q  W  L  I  R  M  M  L  V  V  *  R  M  G  K  F  I  *  Q  L  F  F  R  S  R  F  R  D  E  H  L  V  Q  :  I  P  L  L  D  L  N  D  H  L  M  P  N  A  A  M  L  C  Q  D  I  L  F  F  S  R  *  R  N  A  I  S  L  H  L  E  R  E  *  S  K  Q  *  K  A  V  C  T  T  E  I  Q  F  A  A  N  N  S  S  C  S  N  R  *  L  F  P  F  I  H  L  S  V  L  V  *  S  L  L  I  S  K  L  N  N  S  R  D  N  R  T  A  S  L  K  V  I  I  I  N  V  K  I  L  Q  E  S  E  K  E  L  A  E  F  F  A   </second_frame>
            <third_frame>   N  I  K  H  K  T  L  C  F  S  *  A  F  T  L  S  K  V  Y  Q  Q  S  R  K  F  C  R  S  H  K  N  G  I  H  N  G  S  K  F  A  S  F  G  S  Y  G  G  Y  Q  H  S  F  F  V  S  S  L  F  Q  H  P  I  Q  A  P  C  C  S  T  C  S  *  P  P  S  A  S  A  S  D  Y  T  R  H  Y  *  P  P  H  A  P  P  A  S  S  S  T  I  W  *  S  *  E  I  Y  S  N  D  P  F  *  S  P  S  L  H  S  F  I  T  Y  C  F  F  L  *  R  Q  S  *  F  A  S  S  V  Y  E  L  H  T  L  *  S  L  P  L  R  F  F  S  S  *  V  S  Y  S  *  R  V  S  P  S  T  *  E  A  L  F  F  K  N  P  F  *  Y  P  R  F  F  A  *  N  P  F  F  Y  Y  P  *  K  G  L  V  V  E  *  L  H  L  *  E  L  F  L  F  V  S  V  *  S  Q  L  G  I  *  Y  E  S  *  A  I  K  I  L  G  F  *  V  R  S  R  S  P  N  S  T  V  S  S  A  N  *  D  L  K  E  C  Y  *  A  G  T  R  Y  W  G  W  Y  R  N  F  C  C  T  N  E  A  A  *  C  D  C  C  D  N  N  N  E  S  W  C  P  L  *  *  D  C  G  T  *  G  I  G  A  F  T  C  T  F  A  A  E  A  A  S  V  *  W  G  A  G  S  C  K  M  W  S  C  C  E  *  V  D  S  S  D  H  D  G  V  L  A  F  *  C  *  *  S  V  E  G  W  W  I  P  L  V  G  P  F  L  *  *  K  S  R  S  *  E  G  F  S  T  L  D  L  E  I  E  L  Q  E  G  E  V  D  S  G  *  *  E  *  C  *  W  C  E  E  W  G  S  L  F  D  S  S  S  S  E  A  A  F  E  M  N  I  *  S  R :   Y  H  C  *  I  *  M  I  I  *  C  Q  M  L  L  C  C  V  K  I  F  S  S  S  R  G  R  E  M  R  L  V  C  I  W  S  E  N  D  P  N  N  R  K  L  C  A  P  Q  K  Y  S  L  Q  Q  T  T  V  A  A  L  I  D  S  Y  F  L  S  F  I  C  Q  F  W  C  N  L  Y  *  F  R  N  *  T  I  V  E  I  T  E  L  Q  V  *  K  *  L  L  *  M  *  R  Y  C  R  K  V  K  K  N  L  L  S  S  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="129400" stop="128195"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1203</number_coding_nucleotides>
                  <number_encoded_amino_acids>401</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>STKLYAFLELLHSLKCISNQENFAGATKMGFTMGLNLLLLVAMVATNILSLYHLSSNIQSKPPVAPPVPDHLLHQLQTIRATINHLTRLQPPAPPSGKAKKSTVTIPSDLLLYTHLSPIASSCKDNPDLLHQYMSYTPFSLCPSDSSVAESLILRGCHPLPRRRCFSRTPSSIPASLPKTPFSTIPEKALLWNNYTCKSFSCLSQSNPNLGFDMKVEQSRFLDFKSDLDLPIPQFLQLTKTSKSVIRLALDIGGGTGTFAAQMKLHNVTVVTTTMNLGAPYSETVALRGLVPLHVPLQQRLPVFDGVLDLVRCGHAVNRWIPVTMMEFLLFDVDRVLRAGGYLWLDHFFSKRADLEKVFQPLIWKLNYKKVKWTVANKNDASGVKNGEVYLTALLQKPLSR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="126347" stop="126141"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CQMLLCCVKIFSSSRGREMRLVCIWSENDPNNRKLCAPQKYSLQQTTVAALIDSYFLSFICQFWCNLY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 6 chains have been computed
$ 
$ memory statistics:
$ 8640 bytes spliced alignments in total
$ 4 spliced alignments have been stored
$ 2160 bytes was the average size of a spliced alignment
$ 8200 bytes predicted gene locations in total
$ 3 predicted gene locations have been stored
$ 2733 bytes was the average size of a predicted gene location
$ 2 megabytes was the average size of the backtrace matrix
$ 6 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-27 19:50:30
-->
