<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-27 19:45:21"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E302202" ref_strand="+" ref_description="SGN-E302202 [cLEW-19-K11]">
      <seq>gagccccttttcctttgtttgttcttttcaatgtttaatttctgtacacaatgtttgttcttttgtaatcgaaggtgaagtagagttacaatggcgattcctctactgaaaaagaaagttatcaagaaaagggtgaagcaattcaagaggcatcagagtgataggagaatcactgttaaggtattgttttttatttcttgaaacccctcttttgcattaagctctattgggtaatagtgaaaaaagctcgtctctttatgggttgacaaaaaaattggattttgttgggttttttgtgttcgagagggaaaatgatgagagttattgtcgccccagtcttaatttgcatccaatttattggattcgcaaggtggtgattgactcattgtttctgatccttcctaaacaataatattaaattgtatatttgtgtggttttagctttcttgtttgatgctaagcttgtttattgagttgtgaaaagaacgtgcgatgatgcgtatccacctattctcgagggttcgatgatgaatacaatacatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="1560" stop="81"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1260" g_stop="889" g_length="372"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="370" r_length="370" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="888" i_stop="489" i_length="400">
            <donor d_prob="0.678" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.80"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="488" g_stop="312" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="371" r_stop="543" r_length="173" r_score="0.768"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-E302202" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.011" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E302202" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1260" e_stop="889"/>
          <exon e_start="488" e_stop="312"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCCCCTTTTTCCTTTGTTTGTTCTTTTCAATGTTTAATTTCTGTACACAATGTTTGTTCTTTTGTAATCGAAGGTGAAGTAGAGTTACAATGGCGATTCCTCTACTGAAAAAGAAAGTTATCAAGAAAAGGGTGAAGCAATTCAAGAGGCATCAGAGTGATAGGAGAATCACTGTTAAGGTATTGTTTTTTTATTTCTTGAAACCCCTCTTTTGCATTAAGCTCTATTGGGTAATAGTGAAAAAAGCTCGTCTCTTTATGGGTTGACAAAAAAATTGGATTTTGTTGGGTTTTTTGTGTTCGAGAGGGAAAATGATGAGAGTTATTGTCGCCCCAGTCTTAATTTGCATCCAATTTATTGGATTCGCAAGGTGGTGATTGACACATCATATCTGATTCTTCTTGAACAAATAATTTGGAACTTTTTTTTGTTTGGTTTTAGCGTTTTCCTTTTGATGTTAAATTTTATTTGTGGACAATGTGCTTATAAGATGTGAGGATGCTTATCCACGTATTCTGTAGAGTTCAATGATGAATTCAAAACATGCACTACCATCTGATCTTATAGCATTTGTCATCCTTTTAAGGTCTTGGGTTTGTACCTTCTTTTTTTTGTGGTTTTGTTCAGTTTCTTGAACATTAGGATTCAAATTTGTTTCTTTGCTTACTATTAGTATTATCTATACTATTTTTGTTTGTTAAAAATGGAAAAATGATGATAGTTCATGTCGCCCCAGTCTTAAGTTGCATCCAATTTATTGGATTTGCAAGGTGGTGATTGACTCATTATATCTGATTCTTTCTAAACAGTAATGTT-TGTTTTATACTTGTTTGGTTTTGGTTTTATTTTGTTTTTTGATGCTAAGCTTGTTTATGGCGACATG-CTATATGGTGTGATGATGTGTATCCACCTTTTCTGTAGGGTTCAATGATGAATTCAAATACATG</genome_strand>
        <mrna_strand>GAGCCCC-TTTTCCTTTGTTTGTTCTTTTCAATGTTTAATTTCTGTACACAATGTTTGTTCTTTTGTAATCGAAGGTGAAGTAGAGTTACAATGGCGATTCCTCTACTGAAAAAGAAAGTTATCAAGAAAAGGGTGAAGCAATTCAAGAGGCATCAGAGTGATAGGAGAATCACTGTTAAGGTATTG-TTTTTTATTTCTTGAAACCCCTCTTTTGCATTAAGCTCTATTGGGTAATAGTGAAAAAAGCTCGTCTCTTTATGGGTTGACAAAAAAATTGGATTTTGTTGGGTTTTTTGTGTTCGAGAGGGAAAATGATGAGAGTTATTGTCGCCCCAGTCTTAATTTGCATCCAATTTATTGGATTCGCAAG................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGATTGACTCATTGTTTCTGATCCTTCCTAAACAATAATATTAAATTGTATATTTGTGTGGTTTTAG-CTT-TCTTG---TTTGATGCTAAGCTTGTTTATTGAGTTGTGAAAAGAACGTGCGATGATGCGTATCCACCTATTCTCGAGGGTTCGATGATGAATAC-AATACATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E739664" ref_strand="+" ref_description="SGN-E739664 [LC18BE04]">
      <seq>ggctcctctgctctttcctgttcttcaaattctatctctgctccagttggtctttgttgttctcaaagattaacacttccttttcgaaatcaaagaattgggtttctggaaaatccatcaagcttgaagattttccattttcaccgaaacactaccctccctttgctgaactgcactgctacggaagagatcgtggaggctagtgaaacagagggattatttgttgaaactgggtacatatatagtgttcatgggcttcaaggtgaggttcgagtaaaagcgacaactgatttccctgaattgcgattttcccagccaggaaggcgatggttgaggcagcaagttacagggagagatatgattcaagaaatcgaactagtggagggaagaggtcatccaggacagaagagttggatacttaaattccacgagattaacacaattgagcaggcccaaaaacttgtggggtcggccttactggtgaagaatgaagatagaccaatcctggaggaaggtgaattttacacccctgaccttgttgggatgaaagtatttctaaaggaaactagagaactggtaggaactgttattaatgttttcaacagtggagctagtgatctcctacatgttgagcttctaccgaatcaaaatgcaagaccacagttggaaggaagtgcatctggtcctcttgtatgggtccctttcgttgaagcaattgttccaaatattgatttgagtaaaagggaaatgctgattacacctccaaagggtcttttagaattgaacatccgtgcagatgagaggtccaagaaagagaggcgacagcttgaatggaaagagagaaaaaagtctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="15645" stop="9759"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15345" g_stop="15168" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15167" i_stop="13374" i_length="1794">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.880" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13373" g_stop="13237" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="315" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="13236" i_stop="13146" i_length="91">
            <donor d_prob="0.017" d_score="1.00"/>
            <acceptor a_prob="0.922" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13145" g_stop="13011" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="450" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13010" i_stop="12598" i_length="413">
            <donor d_prob="0.584" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12597" g_stop="12487" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="561" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="12486" i_stop="12377" i_length="110">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.880" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="12376" g_stop="12110" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="562" r_stop="828" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="12109" i_stop="10084" i_length="2026">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10083" g_stop="10059" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="829" r_stop="853" r_length="25" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-E739664" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>853</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E739664" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15345" e_stop="15168"/>
          <exon e_start="13373" e_stop="13237"/>
          <exon e_start="13145" e_stop="13011"/>
          <exon e_start="12597" e_stop="12487"/>
          <exon e_start="12376" e_stop="12110"/>
          <exon e_start="10083" e_stop="10059"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTCCTCTGCTCTTTCCTGTTCTTCAAATTCTATCTCTGCTCCAGTTGGTCTTTGTTGTTCTCAAAGATTAACACTTCCTTTTCGAAATCAAAGAATTGGGTTTCTGGAAAATCCATCAAGCTTGAAGATTTTCCATTTTCACCGAAACACTACCCTCCCTTTGCTGAACTGCACTGGTAAATCTTCTTTCCATTAAAGTTTTAATCTTTATTGATTTTTGAGTTTCCATAATGCTTACTTTGATTTTTTCTGACTTTTTCCGAACTGGGTTGTGTTTATTTTGGTAGTATCAGAAATTACTCACTTCCAAGTATATACTGTTTTCAACTGAATTCTGAAATATGTTCTCAAGATGTTATGCTTTGCTTTTGTGGATTTTATGTTCCTTTGAATTATCATTAGTATTATGTTCTGACGAAGTGGTGTCCCTTGTCCAGCCAGCTTGGCAAGATCCTCTTGGTCTGGTTTAGAGATTGTATGTCGATATAAAAATAAGCCCGTGGCTGTGAGATTTAGAGAGTCTGAATTTTTCAGAGAACCCCTAATTTGTTTTAAAGAAAAATTATTGAGTATTGGAGTGAAATGGGTCCAAATATGGGGTGAATGGATGTTGAGGGTTAATATAGTGGACCAAAATTAGTTTAGGATTAACAAGTAGTAGTAGTAGACGACTAGTTTTTGCTGCTGAATAACACGTCAACATACCCAGTGTAGTCCGGGGGGGGGGTCTGGAGTGGGTAGAGTGTACGTAGGCCTTACCCCTACCTCACGGAGGCCTCTGCTGAATACATGCTGCTTAGTATAAAAGTATAGGTACATAGTATGGGATTTGAGACTTATCATTGGACATGTCCTTCTCAGTTCAGCTTATTTCTACATTCCTCGACTTCGTTTTGTTTCTTTTTGTAAGTTTGTTCTGTGGTTTGTCTATTTGTTGGTTCTAGTTTTGAAGCAGGAGCATCTTCAGATAATTCTATCAAGTTAATTGTACTTAAAGTTAGTCATTACTTCACAGTTAGGCAAATTAAGTTAATGTTGGCAACACATTATCAGATTAATGTAAGGTAGATTTATCTAATATCAATTTCTTGGGTCAGATCTTTTGCTTTTTTTAGTTTGCTATTTATGTCTTGCGTAGAAGTAAAGCGTCTTGGCAACTCATATTATGCGGCTTTGTCCCACAGTGACACTTCTGGCTTCATACTTAATCTTGTAGTTGCACTCTGACAATTGCTTTAGAATCCATACCGAAGATCGAAAGTGAGAGCATCATTATTTAAGGCAAAAGATGCAAAAGTACAGTAGGAGATGAATATTTGTTCTTTTGGTAGGTTGGATATACATGAACGGTAACTCAAGACACATTTATGTTTCTTGCCTATCCCAAACAAGGTACAGTGACCACGACCCATCAGAAGACACTAGGTTTAATAGAAGTTTTGGAATTGAGCAAAACCTTGAATTTTGTGCTGTTATTTGCTGTTCTATTGACATTTCACTTGAGCTGTTTCCTTCAATGACACACCGGCTAATCATTACTTTTATCTTCTGCAAGTATATGTTGTATATTTGAGCTATCTTAAGTATCACATCTTGTGATTGTTGTCATTCTACACCCTTAAGCTTAAGCAAGTGTGAGGTAATCTTTGAATTTGTAAATTCTTACAAATTCCAGTTAAAAGTTTCCCGAATCAAGTTAATCACATAACATAGAAAAATCATGTATGATGTTCTTCCTGGAAAGATATCATCTCATAATAATGTACGCTTTCTACAAATTTGTTACTCATCATGATATACCAAGTCATGTGAATTAGTTATCAGTTACAGAACGCAGTGCTTAGACTGTCAAGCATCTTAATTATGCTAGAGTATCACAGTAGTTTTCATTCACTAGAAAGTTTTCTTTATAGTTTCTGCAAAGTCACTTGGTCCTCAAGTTAAGCACCTTTATTGTTTGTTCATTTCAGCTACGGAAGAGATCGTGGAGGCTAGTGAAACAGAGGGATTATTTGTTGAAACTGGGTACATATATAGTGTTCATGGGCTTCAAGGTGAGGTTCGAGTAAAAGCGACAACTGATTTCCCTGAATTGCGATTTTCCCAGGTAGAAAGCATCAGGAACTTAATAATGGGACTGGTTTCTCGTTTTTGGCCTTCATGAGAATATCCTTTTCATGAATTCACTCTTAATTTAGCCAGGAAGGCGATGGTTGAGGCAGCAAGTTACAGGGAGAGATATGATTCAAGAAATCGAACTAGTGGAGGGAAGAGGTCATCCAGGACAGAAGAGTTGGATACTTAAATTCCACGAGATTAACACAATTGAGCAGGTGATCTCCGTGTAATTATGCTGTACATTGGGTTTCCACAACCCACACTATTGTTTTTCCTCATATATTATGGAATGCAGTAAATATGTCTTTTGATTATAATGACCTTATCTTTCCTGTGTTAAATTAATTTTAAATCATGCATGTACAATCACAGTATTTCAATACAGCAAAGTGGCAGTGTCATGTAAGAAAGTTGGAAGAATTTTATATGACTTTACTACCGAATCGAAAATATTTGGTTCATCTTTTGTAAATAAAGGCAAATTTCACTCTGCCCATTAAATACGGAACCATTACTACAATTCTAATGCCAGTTTTATGTATCACCTGAGACATATTTTGGAAATGGACTTGATCTTTATCTTAGGGCATGGCCGTTTGATATATCTTGTTTTCTCGATTCTCCTCAGGCCCAAAAACTTGTGGGGTCGGCCTTACTGGTGAAGAATGAAGATAGACCAATCCTGGAGGAAGGTGAATTTTACACCCCTGACCTTGTTGGGATGAAAGTATTTCTAAAGGTTTGTTTCCACGGCTTCTGACTTTCATAAAAGGCACACAGTTCTTTAGTTTAATTTCTATTGGAGCTGAGTGGCACTTAAAAGGGATCTTCTATTTTTATGTGCTCCAGGAAACTAGAGAACTGGTAGGAACTGTTATTAATGTTTTCAACAGTGGAGCTAGTGATCTCCTACATGTTGAGCTTCTACCGAATCAAAATGCAAGACCACAGTTGGAAGGAAGTGCATCTGGTCCTCTTGTATGGGTCCCTTTCGTTGAAGCAATTGTTCCAAATATTGATTTGAGTAAAAGGGAAATGCTGATTACACCTCCAAAGGGTCTTTTAGAATTGAACATCCGTGCAGATGAGAGGTCCAAGAAAGAGAGGCGACAGCTTGTGAGTTGCTTTTCTTTTTTCTCCCATTTTGCCAGAATTTATCATATAGGTCACATGCTATTGCGGAGTGCTGTCAGTGTGGTTTCAGAAATCATAATTTCTTTTAAAAGAAATTTTATTTATCTTTGATTCTTTTCTAGAGAAGCAACACCTTGTGAGTTGATTTTGTTTGTGTTCACTTTTCTAGAATCAGAGTGCTGTCTCAATCATTTAAGAAGTCACTTTGCCATTTTCAAAGAAATTCTAGCTACTTTTTCTCAAGTACTCTGATTGGGTTTTTTCATATTCATTATTGGTTACAAGTTACTCTTGTGTGGTTTACTTTATAAATTTGACCAATCACAGACGTGCGTAAAGCAGTCAAGTTTAATTTTCTTCTTCTTGGCGCCTTCTCTAGTACTCCTTATGCTTCGTCTTGCTACACACCTCTTTCAGGGGTAGACCAGATACAATACCTTCAGTTTGGAAGTAATTAACCAAAAAATTATAGTTTTCCTTAGATTTTTGGTAAGGAATTATAGCTGCCCTCAAAACACATTTTGTTTCATCTCTTTCGGTATCTTCCTGGATTTTTGGCAGTATAGAAGCCTCCACTTTGTTCATCCCATTTGAATCTATTATCTTCACAGGGAAGTCCCTGAAAACTCCCATTTGTACTGTAAAATTCAGCAACTGTCACCAATTGCCAATCGTTGAAATGTCTTCTGAATCTGATGTTTCATATCTCATAGTCCCTGGATTCTGCTACAGTAGCTTCAGGGTACTGAATCAAGTTGAAAAAACAAAAGGAGTTGTATTTTTGGATGATTGTGGACTATCCATTTGTCATGACATAAGAGACTTTCCTTCCATTACTCCCGATGATGCTTGTTATTTGCAAAACTCAGACCACATCTTGCCAATAGGTGGTTTCTTATCTTAACCTATATGTGTTGTTTGCATCCTCTGCCAGGTGTAATCATTTCTAATCTTGCCCAACATCTTTTAAAGACAAATACATCTCAATGTTCACATTTCTATGACACTCATCCTATGAATAATTAGACCTTAGCAGCCTAACTTTTTTTTTTTTATCAAAGCCATGGAAACCCAACATTTACTCCAATATAACATTGCTGGCCTTACTGCCGTTAAATAATTTTTTTTAGGTACTTTGTAGTTGCACGGAAATCCACATCACTTATTCATTTCAGTCATCCTATATTTAATTTCTGTGTTATATCTTCATCTATCATGTCTTTTTTCTTTTAAGGCCAAGTTTAACGGGGTTTATCTTTATAGCTGCTTTACAGGTTTTTGGTCTGTTAGCTTCATGTTACTTTCATGTTTGAAGCAACTTTATTTTCTCTATAACCTTTGCTCCTTGATGCCTTTCTAATACAGTTTAGTCTTCACCAAAAAAAAAAATCTAAAAAGATTCTGCATTTAGGCACAACAATTACATCGAACCTCACTTTGCCTTCATTCTTACTATGGAGGCAAAACTTGCATATTAGTTCTACTTATCCTAAAACCCTTACTTAATGGAGTGTATTTCAATATTTTCAACTTTTTATTGATTCACTCCCTCATTTAATCAATTGACAATTATCTGCAAATAACAGTTCCCGTATAAAGTGAAGTTAGATGACTGTAGCCACTTGTTAGAAGATGGCGGTTGCGCCACCATATATTCACATCATTAATAGTTGTTAACTCCACAATGGTGAGATAAGAACAAGGTGAATTTGGTTTGTGCAGAAGGATAAATTCTTTAACATCTAAATAAATGGTTACCCACTTCTCCTCATAAGAATGTAGTGCAGTGATTATCATTAAATAGATGTCATAATTTTCTTATCCGAGCTCAATGACAAAGTAATTCTTGATGGAGAGTTCATACTTAGCTGTTCCAGATGAGTGCCGGTCATTAAGTAATGCCTCTAAAGTTGCTTTTCTCTCCGGTGCTCCTCTGTGATTGTCGTAGGTACTAAATCTATAGCATTGATCTAGTGTGTTTGGCCTACTTAACCTTCTTCTTTTTCAGGAATGGAAAGAGAGAAAAAAGTCTC</genome_strand>
        <mrna_strand>GGCTCCTCTGCTCTTTCCTGTTCTTCAAATTCTATCTCTGCTCCAGTTGGTCTTTGTTGTTCTCAAAGATTAACACTTCCTTTTCGAAATCAAAGAATTGGGTTTCTGGAAAATCCATCAAGCTTGAAGATTTTCCATTTTCACCGAAACACTACCCTCCCTTTGCTGAACTGCACTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGGAAGAGATCGTGGAGGCTAGTGAAACAGAGGGATTATTTGTTGAAACTGGGTACATATATAGTGTTCATGGGCTTCAAGGTGAGGTTCGAGTAAAAGCGACAACTGATTTCCCTGAATTGCGATTTTCCCAG...........................................................................................CCAGGAAGGCGATGGTTGAGGCAGCAAGTTACAGGGAGAGATATGATTCAAGAAATCGAACTAGTGGAGGGAAGAGGTCATCCAGGACAGAAGAGTTGGATACTTAAATTCCACGAGATTAACACAATTGAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAAAAACTTGTGGGGTCGGCCTTACTGGTGAAGAATGAAGATAGACCAATCCTGGAGGAAGGTGAATTTTACACCCCTGACCTTGTTGGGATGAAAGTATTTCTAAAG..............................................................................................................GAAACTAGAGAACTGGTAGGAACTGTTATTAATGTTTTCAACAGTGGAGCTAGTGATCTCCTACATGTTGAGCTTCTACCGAATCAAAATGCAAGACCACAGTTGGAAGGAAGTGCATCTGGTCCTCTTGTATGGGTCCCTTTCGTTGAAGCAATTGTTCCAAATATTGATTTGAGTAAAAGGGAAATGCTGATTACACCTCCAAAGGGTCTTTTAGAATTGAACATCCGTGCAGATGAGAGGTCCAAGAAAGAGAGGCGACAGCTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGGAAAGAGAGAAAAAAGTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E365223" ref_strand="+" ref_description="SGN-E365223 [cLPT-16-A11]">
      <seq>ctctttcctgttcttcaaattctatctctgctccagttggtctttgctgttctcaaagattaacacttccttttcgaaatcaaagaattgggtttctggaaaatccatcaagcttgaagatattccattttcaccggaacactaccctccctttgctgaactgcactgctaccgaagagatcgtggaggctagtgagacagaaggattatttgttgaaactgggtagaaagcatcaggaacttaataatgggactggtttctcgtttttggcctgcatgagaatatccttttcatgaattcactcttaattcagccaggaaggcgatggttgaggcagcaagttacagggagagatataattcaagaaatcgaactagtggagggaagaggtcatccaggacagaagagttggatacttaaattccacgagattaacacaatagagcaggcccaaaaacttgtggggtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="15635" stop="12278"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15335" g_stop="15168" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="168" r_length="168" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15167" i_stop="13374" i_length="1794">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.880" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13373" g_stop="13319" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="223" r_length="55" r_score="0.945"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="13318" i_stop="13237" i_length="82">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13236" g_stop="13011" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="449" r_length="226" r_score="0.982"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13010" i_stop="12598" i_length="413">
            <donor d_prob="0.584" d_score="0.98"/>
            <acceptor a_prob="0.943" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12597" g_stop="12578" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="469" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-E365223" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E365223" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15335" e_stop="15168"/>
          <exon e_start="13373" e_stop="13319"/>
          <exon e_start="13236" e_stop="13011"/>
          <exon e_start="12597" e_stop="12578"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTTCCTGTTCTTCAAATTCTATCTCTGCTCCAGTTGGTCTTTGTTGTTCTCAAAGATTAACACTTCCTTTTCGAAATCAAAGAATTGGGTTTCTGGAAAATCCATCAAGCTTGAAGATTTTCCATTTTCACCGAAACACTACCCTCCCTTTGCTGAACTGCACTGGTAAATCTTCTTTCCATTAAAGTTTTAATCTTTATTGATTTTTGAGTTTCCATAATGCTTACTTTGATTTTTTCTGACTTTTTCCGAACTGGGTTGTGTTTATTTTGGTAGTATCAGAAATTACTCACTTCCAAGTATATACTGTTTTCAACTGAATTCTGAAATATGTTCTCAAGATGTTATGCTTTGCTTTTGTGGATTTTATGTTCCTTTGAATTATCATTAGTATTATGTTCTGACGAAGTGGTGTCCCTTGTCCAGCCAGCTTGGCAAGATCCTCTTGGTCTGGTTTAGAGATTGTATGTCGATATAAAAATAAGCCCGTGGCTGTGAGATTTAGAGAGTCTGAATTTTTCAGAGAACCCCTAATTTGTTTTAAAGAAAAATTATTGAGTATTGGAGTGAAATGGGTCCAAATATGGGGTGAATGGATGTTGAGGGTTAATATAGTGGACCAAAATTAGTTTAGGATTAACAAGTAGTAGTAGTAGACGACTAGTTTTTGCTGCTGAATAACACGTCAACATACCCAGTGTAGTCCGGGGGGGGGGTCTGGAGTGGGTAGAGTGTACGTAGGCCTTACCCCTACCTCACGGAGGCCTCTGCTGAATACATGCTGCTTAGTATAAAAGTATAGGTACATAGTATGGGATTTGAGACTTATCATTGGACATGTCCTTCTCAGTTCAGCTTATTTCTACATTCCTCGACTTCGTTTTGTTTCTTTTTGTAAGTTTGTTCTGTGGTTTGTCTATTTGTTGGTTCTAGTTTTGAAGCAGGAGCATCTTCAGATAATTCTATCAAGTTAATTGTACTTAAAGTTAGTCATTACTTCACAGTTAGGCAAATTAAGTTAATGTTGGCAACACATTATCAGATTAATGTAAGGTAGATTTATCTAATATCAATTTCTTGGGTCAGATCTTTTGCTTTTTTTAGTTTGCTATTTATGTCTTGCGTAGAAGTAAAGCGTCTTGGCAACTCATATTATGCGGCTTTGTCCCACAGTGACACTTCTGGCTTCATACTTAATCTTGTAGTTGCACTCTGACAATTGCTTTAGAATCCATACCGAAGATCGAAAGTGAGAGCATCATTATTTAAGGCAAAAGATGCAAAAGTACAGTAGGAGATGAATATTTGTTCTTTTGGTAGGTTGGATATACATGAACGGTAACTCAAGACACATTTATGTTTCTTGCCTATCCCAAACAAGGTACAGTGACCACGACCCATCAGAAGACACTAGGTTTAATAGAAGTTTTGGAATTGAGCAAAACCTTGAATTTTGTGCTGTTATTTGCTGTTCTATTGACATTTCACTTGAGCTGTTTCCTTCAATGACACACCGGCTAATCATTACTTTTATCTTCTGCAAGTATATGTTGTATATTTGAGCTATCTTAAGTATCACATCTTGTGATTGTTGTCATTCTACACCCTTAAGCTTAAGCAAGTGTGAGGTAATCTTTGAATTTGTAAATTCTTACAAATTCCAGTTAAAAGTTTCCCGAATCAAGTTAATCACATAACATAGAAAAATCATGTATGATGTTCTTCCTGGAAAGATATCATCTCATAATAATGTACGCTTTCTACAAATTTGTTACTCATCATGATATACCAAGTCATGTGAATTAGTTATCAGTTACAGAACGCAGTGCTTAGACTGTCAAGCATCTTAATTATGCTAGAGTATCACAGTAGTTTTCATTCACTAGAAAGTTTTCTTTATAGTTTCTGCAAAGTCACTTGGTCCTCAAGTTAAGCACCTTTATTGTTTGTTCATTTCAGCTACGGAAGAGATCGTGGAGGCTAGTGAAACAGAGGGATTATTTGTTGAAACTGGGTACATATATAGTGTTCATGGGCTTCAAGGTGAGGTTCGAGTAAAAGCGACAACTGATTTCCCTGAATTGCGATTTTCCCAGGTAGAAAGCATCAGGAACTTAATAATGGGACTGGTTTCTCGTTTTTGGCCTTCATGAGAATATCCTTTTCATGAATTCACTCTTAATTTAGCCAGGAAGGCGATGGTTGAGGCAGCAAGTTACAGGGAGAGATATGATTCAAGAAATCGAACTAGTGGAGGGAAGAGGTCATCCAGGACAGAAGAGTTGGATACTTAAATTCCACGAGATTAACACAATTGAGCAGGTGATCTCCGTGTAATTATGCTGTACATTGGGTTTCCACAACCCACACTATTGTTTTTCCTCATATATTATGGAATGCAGTAAATATGTCTTTTGATTATAATGACCTTATCTTTCCTGTGTTAAATTAATTTTAAATCATGCATGTACAATCACAGTATTTCAATACAGCAAAGTGGCAGTGTCATGTAAGAAAGTTGGAAGAATTTTATATGACTTTACTACCGAATCGAAAATATTTGGTTCATCTTTTGTAAATAAAGGCAAATTTCACTCTGCCCATTAAATACGGAACCATTACTACAATTCTAATGCCAGTTTTATGTATCACCTGAGACATATTTTGGAAATGGACTTGATCTTTATCTTAGGGCATGGCCGTTTGATATATCTTGTTTTCTCGATTCTCCTCAGGCCCAAAAACTTGTGGGGTC</genome_strand>
        <mrna_strand>CTCTTTCCTGTTCTTCAAATTCTATCTCTGCTCCAGTTGGTCTTTGCTGTTCTCAAAGATTAACACTTCCTTTTCGAAATCAAAGAATTGGGTTTCTGGAAAATCCATCAAGCTTGAAGATATTCCATTTTCACCGGAACACTACCCTCCCTTTGCTGAACTGCACTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCGAAGAGATCGTGGAGGCTAGTGAGACAGAAGGATTATTTGTTGAAACTGG..................................................................................GTAGAAAGCATCAGGAACTTAATAATGGGACTGGTTTCTCGTTTTTGGCCTGCATGAGAATATCCTTTTCATGAATTCACTCTTAATTCAGCCAGGAAGGCGATGGTTGAGGCAGCAAGTTACAGGGAGAGATATAATTCAAGAAATCGAACTAGTGGAGGGAAGAGGTCATCCAGGACAGAAGAGTTGGATACTTAAATTCCACGAGATTAACACAATAGAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAAAAACTTGTGGGGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E358384" ref_strand="+" ref_description="SGN-E358384 [cLHT-35-C12]">
      <seq>ttttccttgtcaaatcatcaaaaatctttcctcaattcatctcagcaccaccttcatcatattggatctgctccatctggtctttcccttgataggcactttggtttttacccagactcgtcaatcttgagcccaggttttaggggcatgggtataggtactcgtgacgaaagtttgatggttaactatggttctcggactactttgaatgctggtgttgctgttccaaggaatatgtcagatactgcttctcctagatttggcatgatctcttcccaaaaacttagtccattgttcctaggtaatggtcatttcccaggacatgcagctactagctttgaggggctgactgaacgcagtcgcactcgacgtgttgaaaataataatgggaatcagatggataacaagaagctgtttctacttgatttggataagattagatgtggtgaagatactcggacaactntgatgattaaaaatattcctaacaagtacacctccaagatgcttttagctgctattgacgaacaacata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="28359" stop="29579"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28659" g_stop="29149" g_length="491"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="491" r_length="491" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29150" i_stop="29235" i_length="86">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29236" g_stop="29279" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="535" r_length="44" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E358384" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E358384" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28659" e_stop="29149"/>
          <exon e_start="29236" e_stop="29279"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCCTTGTCAAATCATCAAAAATCTTTCCTCAATTCATCTCAGCACCACCTTCATCATATTGGATCTGCTCCATCTGGTCTTCCCCTTGATAGGCACTTTGGTTTTTACCCAGACTCGTCAATCTTGAGCCCAGGTTTTAGGGGCATGGGTATAGGTACTCGTGATGAAAGTTTGATGGTTAACTATGGTTCTCGTACTACTTTGAATGCTGGTGTTGCTGTTCCAAGGAATATGTCAGACAATGCTTCTCCTAGGTTTGGCATGATCTCTTCCCAAAAACTTAGTCCATTGTTCCTAGGTAATGGTCATTTCCCAGGACATGCAGCTACTAGCTTTGAGGGGCTGACTGAACGCAGTCGCACTCGACGTGTTGAAAATAATAATGGGAACCAGATGGATAACAAGAAGCTCTTTCTACTTGATTTGGATAAGATTAGATGTGGTGAAGATACTCGGACAACTTTGATGATTAAAAATATTCCTAACAAGTAATAGCAACTTCTCAATGTTTGTACATTGTTGTTAAGTATGTCCTATTTTCGTATGAGTGACAGTTGACCTTGTCTTTCTCCAGGTACACCTCCAAGATGCTTTTAGCTGCTATTGACGAACAACATA</genome_strand>
        <mrna_strand>TTTTCCTTGTCAAATCATCAAAAATCTTTCCTCAATTCATCTCAGCACCACCTTCATCATATTGGATCTGCTCCATCTGGTCTTTCCCTTGATAGGCACTTTGGTTTTTACCCAGACTCGTCAATCTTGAGCCCAGGTTTTAGGGGCATGGGTATAGGTACTCGTGACGAAAGTTTGATGGTTAACTATGGTTCTCGGACTACTTTGAATGCTGGTGTTGCTGTTCCAAGGAATATGTCAGATACTGCTTCTCCTAGATTTGGCATGATCTCTTCCCAAAAACTTAGTCCATTGTTCCTAGGTAATGGTCATTTCCCAGGACATGCAGCTACTAGCTTTGAGGGGCTGACTGAACGCAGTCGCACTCGACGTGTTGAAAATAATAATGGGAATCAGATGGATAACAAGAAGCTGTTTCTACTTGATTTGGATAAGATTAGATGTGGTGAAGATACTCGGACAACTNTGATGATTAAAAATATTCCTAACAA......................................................................................GTACACCTCCAAGATGCTTTTAGCTGCTATTGACGAACAACATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E312339" ref_strand="-" ref_description="SGN-E312339 [cTOA-5-M9]">
      <seq>tccactcagaaagttcagaattgggggatcagattgttcaggaacatctttcatcaggctgcagccaacctgaggatccagttggcaaattggagaatcgctagcagtagcattgaaatgtttttttttttgctcgcggctttaagagtgcagctggctagtacaagtgtgagatacatgtgcagagtagcatgatttgaggcacagaatagaagtatgaagatcttttgtattataatgagtaggtgtttttggttcaaaatctaagagggggagggttctgttagactaagtacatcaagcatctgtgtagttcatgttgtaatcctatggcaagttgaaatggcaaaggctatctcaacatggcatgcaaggtcgtagttttgtaacattgttttggtggttagagtgaagaggggatgcttgaaatttgtaaagtgggaaggccccctgggctgttgttttgtatcaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="29538" stop="30801"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29838" g_stop="29869" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29870" i_stop="30060" i_length="191">
            <donor d_prob="0.996" d_score="0.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30061" g_stop="30501" g_length="441"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="474" r_length="442" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E312339" ref_strand="-">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>473</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E312339" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="29838" e_stop="29869"/>
          <exon e_start="30061" e_stop="30501"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCACTCAGAAAGTTCAGAATTGGGGGATCAGGTAATATAGACCATCTTGTTTAGAATTAAGCATGCAAAATGTAACTACTGTTATGTCATGCATTGCGATTCAGCTAGCTTTGATTTTTTCCCCCTAATTTTCAGGCTATATGCTTGTTGAGATGATAATATTGAAACTGCATCTTTTTCATCACAACATAATCGTATCTTAAGATGAAAACTTGCCTGCAGATTGTTCAGGAACATCTTTCATCAGGCTGCAGCCAACCTGAGGATCCAGTTGGCAAATTGGAGAATCGCTAGCAGTAGCATTGAAATG-TTTTTTTTTTGCTCGCGGCTTTAAGAGTGCAGCTGGCTAGTACAAGTGTGAGATACATGTGCAGAGTAGCATGATTTGAGGCACAGAATAGAAGTATGAAGATCTTTTGTATTATAATGAGTAGGTGTTTTTGGTTCAAAATCTAAGAGGGGGAGGGTTCTGTTAGACTAAGTACATCAAGCATCTGTGTAGTTCATGTTGTAATCCTATGGCAAGTTGAAATGGCAAAGGCTATCTCAACATGGCATGCAAGGTCGTAGTTTTGTAACATTGTTTTGGTGGTTAGAGTGAAGAGGGGATGCTTGAAATTTGTAAAGTGGGAAGGCAAGCTGGGCTGTTGTTTTGTATCAAAC</genome_strand>
        <mrna_strand>TCCACTCAGAAAGTTCAGAATTGGGGGATCAG...............................................................................................................................................................................................ATTGTTCAGGAACATCTTTCATCAGGCTGCAGCCAACCTGAGGATCCAGTTGGCAAATTGGAGAATCGCTAGCAGTAGCATTGAAATGTTTTTTTTTTTGCTCGCGGCTTTAAGAGTGCAGCTGGCTAGTACAAGTGTGAGATACATGTGCAGAGTAGCATGATTTGAGGCACAGAATAGAAGTATGAAGATCTTTTGTATTATAATGAGTAGGTGTTTTTGGTTCAAAATCTAAGAGGGGGAGGGTTCTGTTAGACTAAGTACATCAAGCATCTGTGTAGTTCATGTTGTAATCCTATGGCAAGTTGAAATGGCAAAGGCTATCTCAACATGGCATGCAAGGTCGTAGTTTTGTAACATTGTTTTGGTGGTTAGAGTGAAGAGGGGATGCTTGAAATTTGTAAAGTGGGAAGGCCCCCTGGGCTGTTGTTTTGTATCAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E539167" ref_strand="+" ref_description="SGN-E539167 [TUS-58-M16](-)">
      <seq>cactcagaaagttcagaattgggggatcagattgttcaggaacatctttcatcaggctgcagccaacctgaggatccagttggcaaattggagaatcgctagcagtagcattgaaatgttttttttttgctcgcggctttaagagtgcagctggctagtacaagtgtgagatacatgtgcagagtagcatgatttgaggcacagaatagaagtatgaagatcttttgtattataatgagtaggtgtttttggttcaaaatctaagagggggagggttctgttagactaagtacatcaagcatctgtgtagttcatgttgtaatcctatggcaagttgaaatggcaaaggctatctcaacatggcatgcaaggtcgtagttttgtaacattgttttggtggttagagtgaagaggggatgcttgaaatttgtaaagtgggaaggcaagctgggctgttgttttgtatcaaacaacgcattttggtatttatgtgaaacttgctagaaaattgcataaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="29540" stop="30847"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29840" g_stop="29869" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29870" i_stop="30060" i_length="191">
            <donor d_prob="0.996" d_score="0.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30061" g_stop="30549" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="520" r_length="490" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="521" polyA_stop="530"/>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E539167" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E539167" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29840" e_stop="29869"/>
          <exon e_start="30061" e_stop="30549"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTCAGAAAGTTCAGAATTGGGGGATCAGGTAATATAGACCATCTTGTTTAGAATTAAGCATGCAAAATGTAACTACTGTTATGTCATGCATTGCGATTCAGCTAGCTTTGATTTTTTCCCCCTAATTTTCAGGCTATATGCTTGTTGAGATGATAATATTGAAACTGCATCTTTTTCATCACAACATAATCGTATCTTAAGATGAAAACTTGCCTGCAGATTGTTCAGGAACATCTTTCATCAGGCTGCAGCCAACCTGAGGATCCAGTTGGCAAATTGGAGAATCGCTAGCAGTAGCATTGAAATGTTTTTTTTTTGCTCGCGGCTTTAAGAGTGCAGCTGGCTAGTACAAGTGTGAGATACATGTGCAGAGTAGCATGATTTGAGGCACAGAATAGAAGTATGAAGATCTTTTGTATTATAATGAGTAGGTGTTTTTGGTTCAAAATCTAAGAGGGGGAGGGTTCTGTTAGACTAAGTACATCAAGCATCTGTGTAGTTCATGTTGTAATCCTATGGCAAGTTGAAATGGCAAAGGCTATCTCAACATGGCATGCAAGGTCGTAGTTTTGTAACATTGTTTTGGTGGTTAGAGTGAAGAGGGGATGCTTGAAATTTGTAAAGTGGGAAGGCAAGCTGGGCTGTTGTTTTGTATCAAACAA-GCATTTTGGTATTTATGTGAAACTTGCTAGAAAATTGCATAAAATT</genome_strand>
        <mrna_strand>CACTCAGAAAGTTCAGAATTGGGGGATCAG...............................................................................................................................................................................................ATTGTTCAGGAACATCTTTCATCAGGCTGCAGCCAACCTGAGGATCCAGTTGGCAAATTGGAGAATCGCTAGCAGTAGCATTGAAATGTTTTTTTTTTGCTCGCGGCTTTAAGAGTGCAGCTGGCTAGTACAAGTGTGAGATACATGTGCAGAGTAGCATGATTTGAGGCACAGAATAGAAGTATGAAGATCTTTTGTATTATAATGAGTAGGTGTTTTTGGTTCAAAATCTAAGAGGGGGAGGGTTCTGTTAGACTAAGTACATCAAGCATCTGTGTAGTTCATGTTGTAATCCTATGGCAAGTTGAAATGGCAAAGGCTATCTCAACATGGCATGCAAGGTCGTAGTTTTGTAACATTGTTTTGGTGGTTAGAGTGAAGAGGGGATGCTTGAAATTTGTAAAGTGGGAAGGCAAGCTGGGCTGTTGTTTTGTATCAAACAACGCATTTTGGTATTTATGTGAAACTTGCTAGAAAATTGCATAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E539170" ref_strand="+" ref_description="SGN-E539170 [TUS-58-M16]">
      <seq>cactcagaaagttcagaattgggggatcagattgttcaggaacatctttcatcaggctgcagccaacctgaggatccagttggcaaattggagaatcgctagcagtagcattgaaatgttttttttttgctcgcggctttaagagtgcagctggctagtacaagtgtgagatacatgtgcagagtagcatgatttgaggcacagaatagaagtatgaagatcttttgtattataatgagtaggtgtttttggttcaaaatctaagagggggagggttctgttagactaagtacatcaagcatctgtgtagttcatgttgtaatcctatggcaagttgaaatggcaaaggctatctcaacatggcatgcaaggtcgtagttttgtaacattgttttggtggttagagtgaagaggggatgcttgaaatttgtaaagtgggaaggcaagctgggctgttgttttgtatcaaacaagcattttggtatttatgtgaaacttgctagaaaattgcataaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="29540" stop="30847"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29840" g_stop="29869" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29870" i_stop="30060" i_length="191">
            <donor d_prob="0.996" d_score="0.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30061" g_stop="30549" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="519" r_length="489" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="520" polyA_stop="529"/>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E539170" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E539170" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29840" e_stop="29869"/>
          <exon e_start="30061" e_stop="30549"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTCAGAAAGTTCAGAATTGGGGGATCAGGTAATATAGACCATCTTGTTTAGAATTAAGCATGCAAAATGTAACTACTGTTATGTCATGCATTGCGATTCAGCTAGCTTTGATTTTTTCCCCCTAATTTTCAGGCTATATGCTTGTTGAGATGATAATATTGAAACTGCATCTTTTTCATCACAACATAATCGTATCTTAAGATGAAAACTTGCCTGCAGATTGTTCAGGAACATCTTTCATCAGGCTGCAGCCAACCTGAGGATCCAGTTGGCAAATTGGAGAATCGCTAGCAGTAGCATTGAAATGTTTTTTTTTTGCTCGCGGCTTTAAGAGTGCAGCTGGCTAGTACAAGTGTGAGATACATGTGCAGAGTAGCATGATTTGAGGCACAGAATAGAAGTATGAAGATCTTTTGTATTATAATGAGTAGGTGTTTTTGGTTCAAAATCTAAGAGGGGGAGGGTTCTGTTAGACTAAGTACATCAAGCATCTGTGTAGTTCATGTTGTAATCCTATGGCAAGTTGAAATGGCAAAGGCTATCTCAACATGGCATGCAAGGTCGTAGTTTTGTAACATTGTTTTGGTGGTTAGAGTGAAGAGGGGATGCTTGAAATTTGTAAAGTGGGAAGGCAAGCTGGGCTGTTGTTTTGTATCAAACAAGCATTTTGGTATTTATGTGAAACTTGCTAGAAAATTGCATAAAATT</genome_strand>
        <mrna_strand>CACTCAGAAAGTTCAGAATTGGGGGATCAG...............................................................................................................................................................................................ATTGTTCAGGAACATCTTTCATCAGGCTGCAGCCAACCTGAGGATCCAGTTGGCAAATTGGAGAATCGCTAGCAGTAGCATTGAAATGTTTTTTTTTTGCTCGCGGCTTTAAGAGTGCAGCTGGCTAGTACAAGTGTGAGATACATGTGCAGAGTAGCATGATTTGAGGCACAGAATAGAAGTATGAAGATCTTTTGTATTATAATGAGTAGGTGTTTTTGGTTCAAAATCTAAGAGGGGGAGGGTTCTGTTAGACTAAGTACATCAAGCATCTGTGTAGTTCATGTTGTAATCCTATGGCAAGTTGAAATGGCAAAGGCTATCTCAACATGGCATGCAAGGTCGTAGTTTTGTAACATTGTTTTGGTGGTTAGAGTGAAGAGGGGATGCTTGAAATTTGTAAAGTGGGAAGGCAAGCTGGGCTGTTGTTTTGTATCAAACAAGCATTTTGGTATTTATGTGAAACTTGCTAGAAAATTGCATAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E278191" ref_strand="+" ref_description="SGN-E278191 [cLER-9-B15]">
      <seq>ttgggggatcagattgttcaggaacatctttcatcaggctgcagccaacctgaggatccagttggcaaattggagaatcgctagcagtagcattgaaatgttttttttttgctcgcggctttaagagtgcagttttgctagtacaagtgtgagatacatgtgcagagtagcatgatttgaggcacagaatagaagtatgaagatcttttgtattataatgagtaggtgtttttggttcaaaatctaagagggggagggnactgtgtgactcacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="29758" stop="30619"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29858" g_stop="29869" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="12" r_length="12" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29870" i_stop="30060" i_length="191">
            <donor d_prob="0.996" d_score="0.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30061" g_stop="30322" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="275" r_length="263" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E278191" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>274</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E278191" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29858" e_stop="29869"/>
          <exon e_start="30061" e_stop="30322"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGGGGATCAGGTAATATAGACCATCTTGTTTAGAATTAAGCATGCAAAATGTAACTACTGTTATGTCATGCATTGCGATTCAGCTAGCTTTGATTTTTTCCCCCTAATTTTCAGGCTATATGCTTGTTGAGATGATAATATTGAAACTGCATCTTTTTCATCACAACATAATCGTATCTTAAGATGAAAACTTGCCTGCAGATTGTTCAGGAACATCTTTCATCAGGCTGCAGCCAACCTGAGGATCCAGTTGGCAAATTGGAGAATCGCTAGCAGTAGCATTGAAATGTTTTTTTTTTGCTCGCGGCTTTAAGAGTGCAG-CTGGCTAGTACAAGTGTGAGATACATGTGCAGAGTAGCATGATTTGAGGCACAGAATAGAAGTATGAAGATCTTTTGTATTATAATGAGTAGGTGTTTTTGGTTCAAAATCTAAGAGGGGGAGGGTTCTGTTAGACTAAGTA</genome_strand>
        <mrna_strand>TTGGGGGATCAG...............................................................................................................................................................................................ATTGTTCAGGAACATCTTTCATCAGGCTGCAGCCAACCTGAGGATCCAGTTGGCAAATTGGAGAATCGCTAGCAGTAGCATTGAAATGTTTTTTTTTTGCTCGCGGCTTTAAGAGTGCAGTTTTGCTAGTACAAGTGTGAGATACATGTGCAGAGTAGCATGATTTGAGGCACAGAATAGAAGTATGAAGATCTTTTGTATTATAATGAGTAGGTGTTTTTGGTTCAAAATCTAAGAGGGGGAGGGNACTGTGTGACTCACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E242931" ref_strand="+" ref_description="SGN-E242931 [cLED-31-F13]">
      <seq>tgttcggagtggaatgcagcaatggaaagattgactggttggacaaaatatgaggtcatggggaggactcttcccggtgaagtttttggtggtctttgtcgtcttacgggacaagatgcccttacaaaatttatgattcttttctaccaagcaattagtggtcatgacaccaaaaagcttccctttggcttttttaataggagaggagagtttttggaagtgttcctaacagcaaacaagagaactgatgaacatgggaatgtatgtgggtgtttctgcttcctgcagcctatgacgattgacccagaagcatcagatgagagacaagactctaaagattctctttggaaatataaagaatatgtttatgtactacagcagatgaaaaatccactgaatggaatccagtttacccataaacttcttgaagcaaccggtgtttcagataatcagaaacagcttctggagacaagtgaagcctgtgagaaacagatactgtctgttattgacaatatggatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="34338" stop="33217"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34038" g_stop="33517" g_length="522"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="522" r_length="522" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-E242931" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>522</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E242931" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34038" e_stop="33517"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTCGGAGTGGAATGCAGCAATGGAAAGATTGACTGGTTGGACAAAATATGAGGTCATGGGGAGGACTCTTCCCGGTGAAGTTTTTGGTGGTCTTTGTCGTCTTACGGGACAAGATGCCCTTACAAAATTTATGATTCTTTTCTACCAAGCAATTAGTGGTCATGACACCAAAAAGCTTCCCTTTGGCTTTTTTAATAGGAGAGGAGAGTTTTTGGAAGTGTTCCTAACAGCAAACAAGAGAACTGATGAACATGGGAATGTATGTGGGTGTTTCTGCTTCCTGCAGCCTATGACGATTGACCCAGAAGCATCAGATGAGAGACAAGACTCTAAAGATTCGCTTTGGAAATATAAAGAATATGCTTATGTACTACAGCAGATGAAAAATCCACTGAATGGAATCCAGTTTACCCATAAACTTCTTGAAGCAACCGGTGTTTCAGATAATCAGAAACAGCTTCTGGAGACAAGTGAAGCCTGTGAGAAACAGATACTGTCTGTTATTGACAATATGGATTTT</genome_strand>
        <mrna_strand>TGTTCGGAGTGGAATGCAGCAATGGAAAGATTGACTGGTTGGACAAAATATGAGGTCATGGGGAGGACTCTTCCCGGTGAAGTTTTTGGTGGTCTTTGTCGTCTTACGGGACAAGATGCCCTTACAAAATTTATGATTCTTTTCTACCAAGCAATTAGTGGTCATGACACCAAAAAGCTTCCCTTTGGCTTTTTTAATAGGAGAGGAGAGTTTTTGGAAGTGTTCCTAACAGCAAACAAGAGAACTGATGAACATGGGAATGTATGTGGGTGTTTCTGCTTCCTGCAGCCTATGACGATTGACCCAGAAGCATCAGATGAGAGACAAGACTCTAAAGATTCTCTTTGGAAATATAAAGAATATGTTTATGTACTACAGCAGATGAAAAATCCACTGAATGGAATCCAGTTTACCCATAAACTTCTTGAAGCAACCGGTGTTTCAGATAATCAGAAACAGCTTCTGGAGACAAGTGAAGCCTGTGAGAAACAGATACTGTCTGTTATTGACAATATGGATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E235694" ref_strand="+" ref_description="SGN-E235694 [cLED-15-L21]">
      <seq>tgttcggagtggaatgcagcaatggaaagattgactggttggacaaaatatgaggtcatggggaggactcttcccggtgaagtttttggtggtctttgtcgtcttacgggacaagatgcccttacaaaatttatgattcttttctaccaagcaattagtggtcatgacaccaaaaagcttccctttggcttttttaataggagaggagagtttttggaagtgttcctaacagcaaacaagagaactgatgaacatgggaatgtatgtgggtgtttctgcttcctgcagcctatgacgattgacccagaagcatcagatgagagacaagactctaaagattctctttggaaatataaagaatatgtttatgtactacagcagatgaaaaatccactgaatggaatccagtttacccataaacttcttgaagcaaccggtgtttcagataatcagaaacagcttctggagacaagtgaagcctgtgagaaacagatactgtctgttattgacaatatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="34338" stop="33221"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34038" g_stop="33521" g_length="518"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="518" r_length="518" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-E235694" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>518</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E235694" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34038" e_stop="33521"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTCGGAGTGGAATGCAGCAATGGAAAGATTGACTGGTTGGACAAAATATGAGGTCATGGGGAGGACTCTTCCCGGTGAAGTTTTTGGTGGTCTTTGTCGTCTTACGGGACAAGATGCCCTTACAAAATTTATGATTCTTTTCTACCAAGCAATTAGTGGTCATGACACCAAAAAGCTTCCCTTTGGCTTTTTTAATAGGAGAGGAGAGTTTTTGGAAGTGTTCCTAACAGCAAACAAGAGAACTGATGAACATGGGAATGTATGTGGGTGTTTCTGCTTCCTGCAGCCTATGACGATTGACCCAGAAGCATCAGATGAGAGACAAGACTCTAAAGATTCGCTTTGGAAATATAAAGAATATGCTTATGTACTACAGCAGATGAAAAATCCACTGAATGGAATCCAGTTTACCCATAAACTTCTTGAAGCAACCGGTGTTTCAGATAATCAGAAACAGCTTCTGGAGACAAGTGAAGCCTGTGAGAAACAGATACTGTCTGTTATTGACAATATGGA</genome_strand>
        <mrna_strand>TGTTCGGAGTGGAATGCAGCAATGGAAAGATTGACTGGTTGGACAAAATATGAGGTCATGGGGAGGACTCTTCCCGGTGAAGTTTTTGGTGGTCTTTGTCGTCTTACGGGACAAGATGCCCTTACAAAATTTATGATTCTTTTCTACCAAGCAATTAGTGGTCATGACACCAAAAAGCTTCCCTTTGGCTTTTTTAATAGGAGAGGAGAGTTTTTGGAAGTGTTCCTAACAGCAAACAAGAGAACTGATGAACATGGGAATGTATGTGGGTGTTTCTGCTTCCTGCAGCCTATGACGATTGACCCAGAAGCATCAGATGAGAGACAAGACTCTAAAGATTCTCTTTGGAAATATAAAGAATATGTTTATGTACTACAGCAGATGAAAAATCCACTGAATGGAATCCAGTTTACCCATAAACTTCTTGAAGCAACCGGTGTTTCAGATAATCAGAAACAGCTTCTGGAGACAAGTGAAGCCTGTGAGAAACAGATACTGTCTGTTATTGACAATATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E345259" ref_strand="+" ref_description="SGN-E345259 [cTOF-13-F11]">
      <seq>cgaaaacagctctctaaaaactttgactacttctcaacagaatgatgctgatgggccaagcatggatgagcttagttctgtggcaatggaaatggttagattgattgagacagccactgctccaattttcggagttgatccatctggcttaataaatggatggaatgagaagattgctgacttaacaggattgcatgctagtgaagcagttggaatgtctctcattaatgatattactcatgaagattcacgtggaactgttgaaaaagttctacatagagctctgttaggtgaggaggaaaaaaatgtggaaataaaactgcgaaggtttgggaaagatccaccaggatcagttatataccttgtgatcaatgcctgcacaagccgggaccacaaaaatggtgttgttggtgtgtcctttgtggctcaagatgtcactcctgagaaatttatcatggataaattcatacagttgcgaggagattatgaggctattgtacaaagtcttagtccattgattccaccaatatttgcttcagatgaaaatgcttgttgttcggagtggaatgcagcaatggaaagattgactggttggacaaaatatgaggtcatggggaggactctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="35362" stop="33667"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35062" g_stop="34773" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="290" r_length="290" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34772" i_stop="34302" i_length="471">
            <donor d_prob="0.881" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34301" g_stop="33967" g_length="335"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="625" r_length="335" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-E345259" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>625</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E345259" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35062" e_stop="34773"/>
          <exon e_start="34301" e_stop="33967"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACAGCTCTCTAAAAACTTTGACTACTTCTCAACAGAATGATGCTGATGGGCCAAGCATGGATGAGCTTAGTTCTGTGGCAATGGAAATGGTTAGATTGATTGAGACAGCCACTGCTCCAATTTTCGGAGTTGATCCATCTGGCTTAATAAATGGATGGAATGAGAAGATTGCTGACTTAACAGGATTGCATGCTAGTGAAGCAGTTGGAATGTCTCTCATTAATGATATTACTCATGAAGATTCACGTGGAACTGTTGAAAAAGTTCTACATAGAGCTCTGTTAGGTACTTCTTATGTTGACTTAATAGCAATCATTAAAATTTGGATACGTCCTTAATACTACATGGCTATAATTCTATCTATCTGCTCATGGTGTTATTTTATCTGCATTCTTTATGCATTGCAGTCATACATGATAGCATATCTTCTTAGATTTGAAATTCAGGCGTACTGGTAAGAGAATTGGCTACCTACACTTATTCAATTGGCCTTTCATCTTGTTTGTTGTAATATATACGTAGTTACCTGCATTACTTGGGGCGATATTATGCTTTCAGCATTGACTAGTCGGTCATCTCCACTGCATAGTAGACTTAGGTTGCTCTTTCAGTGCACTCTTTTAGTTAAAATAGATATTTTTCCTCGTCTGGGTAAGTCAAAATTGACTGACAGCCTGAGCACAGAAGTTTCCACTAACATTCCCCAGCTTGTTCTCACTCCCCACCCTCTCTCTATCTTTGTCACTTGTGATTCAGGTGAGGAGGAAAAAAATGTGGAAATAAAATTGCGAAGGTTTGGGAAAGATCCACCAGGATCAGTTATATACCTTGTGATCAATGCCTGCACAAGCCGGGACCACAAAAATGGTGTTGTTGGTGTGTCCTTTGTGGCTCAAGATGTCACTCCTGAGAAATTTATCATGGATAAATTCATACAGTTGCGAGGAGATTATGAGGCTATTGTACAAAGTCTTAGTCCATTGATTCCACCAATATTTGCTTCTGATGAAAATGCTTGTTGTTCGGAGTGGAATGCAGCAATGGAAAGATTGACTGGTTGGACAAAATATGAGGTCATGGGGAGGACTCTT</genome_strand>
        <mrna_strand>CGAAAACAGCTCTCTAAAAACTTTGACTACTTCTCAACAGAATGATGCTGATGGGCCAAGCATGGATGAGCTTAGTTCTGTGGCAATGGAAATGGTTAGATTGATTGAGACAGCCACTGCTCCAATTTTCGGAGTTGATCCATCTGGCTTAATAAATGGATGGAATGAGAAGATTGCTGACTTAACAGGATTGCATGCTAGTGAAGCAGTTGGAATGTCTCTCATTAATGATATTACTCATGAAGATTCACGTGGAACTGTTGAAAAAGTTCTACATAGAGCTCTGTTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGGAGGAAAAAAATGTGGAAATAAAACTGCGAAGGTTTGGGAAAGATCCACCAGGATCAGTTATATACCTTGTGATCAATGCCTGCACAAGCCGGGACCACAAAAATGGTGTTGTTGGTGTGTCCTTTGTGGCTCAAGATGTCACTCCTGAGAAATTTATCATGGATAAATTCATACAGTTGCGAGGAGATTATGAGGCTATTGTACAAAGTCTTAGTCCATTGATTCCACCAATATTTGCTTCAGATGAAAATGCTTGTTGTTCGGAGTGGAATGCAGCAATGGAAAGATTGACTGGTTGGACAAAATATGAGGTCATGGGGAGGACTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E204128" ref_strand="+" ref_description="SGN-E204128 [cLEC-27-M9]">
      <seq>ccaactgaagcacaagttaaagatattgcacagtggttactagttgctcataaggactctacaggtttaagtaccgactgccttgcggatgctggttatcctggtgcggctttactgggagatgctgtttgtggcatggctactgcgagaattacttccaaggattttctattctggttcaggtctcacacagctaaggaagtcaagtggggaggtgctaagcatcatccagatgataaagatgatggaggaaaaatgcacccacgatcttcatttaatgcctttcttgaagtggttaaaagcagaagtttgccatgggagattccggagattaatgccattcattctctacaaatcataatgagagaatcaatccaagagaacgaaaacagctctctaaaaactttgactacttctcaacagaatgatgctgatgggccaagcatggatgagcttagttctgtggcaatggaaatggttagattgattgagac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="35745" stop="34652"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35445" g_stop="34952" g_length="494"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="494" r_length="494" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-E204128" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>494</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204128" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35445" e_stop="34952"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAACTGAAGCACAAGTTAAAGATATTGCACAGTGGTTACTAGTTGCTCATAAGGACTCTACAGGTTTAAGTACTGACTGCCTTGCGGATGCTGGTTATCCTGGTGCGGCTTTACTGGGAGATGCTGTTTGTGGCATGGCTACTGCGAGAATTACTTCCAAGGATTTTCTATTCTGGTTCAGGTCTCACACAGCTAAGGAAGTCAAGTGGGGAGGTGCTAAGCATCATCCAGATGATAAAGATGATGGAGGAAAAATGCACCCACGATCTTCATTTAATGCCTTTCTTGAAGTGGTTAAAAGCAGAAGTTTGCCATGGGAGATTCCGGAGATTAATGCCATTCATTCTCTACAAATCATAATGAGAGAATCAATCCAAGAGAACGAAAACAGCTCTCTAAAAACTTTGACTACTTCTCAACAGAATGATGCTGATGGGCCAAGCATGGATGAGCTTAGTTCTGTGGCAATGGAAATGGTTAGATTGATTGAGAC</genome_strand>
        <mrna_strand>CCAACTGAAGCACAAGTTAAAGATATTGCACAGTGGTTACTAGTTGCTCATAAGGACTCTACAGGTTTAAGTACCGACTGCCTTGCGGATGCTGGTTATCCTGGTGCGGCTTTACTGGGAGATGCTGTTTGTGGCATGGCTACTGCGAGAATTACTTCCAAGGATTTTCTATTCTGGTTCAGGTCTCACACAGCTAAGGAAGTCAAGTGGGGAGGTGCTAAGCATCATCCAGATGATAAAGATGATGGAGGAAAAATGCACCCACGATCTTCATTTAATGCCTTTCTTGAAGTGGTTAAAAGCAGAAGTTTGCCATGGGAGATTCCGGAGATTAATGCCATTCATTCTCTACAAATCATAATGAGAGAATCAATCCAAGAGAACGAAAACAGCTCTCTAAAAACTTTGACTACTTCTCAACAGAATGATGCTGATGGGCCAAGCATGGATGAGCTTAGTTCTGTGGCAATGGAAATGGTTAGATTGATTGAGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E315268" ref_strand="+" ref_description="SGN-E315268 [cTOA-24-G24]">
      <seq>agagagagagaagcgcgcgtctagagagagaaagtgagagagacgcttggtgactctaccagtctcttgtggctgatactatatctgcttgaaggggttttgaatccctactgatgctttcagatcaagattgtgctacaaattccaagtacgaatcaaatgccatctctaagaatgaagacaaagctagccacatccagttcgaaagaaaaaaatggtctccatgtctgtccaaattctagtgtcatatccaagagttctctctctcgaaccagaagtgtgcagaatgcagacgaagttgcagatctgattcacaatactcatgatgttcctagctactacaaagttcatccacaccaagtcggaagaaatggtgatcatgctaatgatttggtagatgaccttcttgaaaagcaacagccacctgttactgattctgcaaaccttgataccacggttttggaatcggtgcaggagtctacagtagtgatctgcaaaccaagttcagagacaatcttttcacctagtgtggagcctgttagtggtgcgcacagtgagtctgatataccaagtgatggagcaaacaatgatttttatgtaccccaattggagactgaagatagtgatagcagcagaagttcgtgtgaacatcagacgtgcaatgtttcagatttctacatctctgatatgattgtttctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="49159" stop="54509"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49459" g_stop="49520" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49521" i_stop="51113" i_length="1593">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.326" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51114" g_stop="51379" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="328" r_length="266" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="51380" i_stop="51566" i_length="187">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.923" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="51567" g_stop="51694" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="456" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51695" i_stop="53684" i_length="1990">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.933" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="53685" g_stop="53808" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="580" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="53809" i_stop="54089" i_length="281">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="54090" g_stop="54209" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="581" r_stop="700" r_length="120" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E315268" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E315268" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49459" e_stop="49520"/>
          <exon e_start="51114" e_stop="51379"/>
          <exon e_start="51567" e_stop="51694"/>
          <exon e_start="53685" e_stop="53808"/>
          <exon e_start="54090" e_stop="54209"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAGAGAAAAGCGCGCGTCTAGAGAGAGAAAGTGAGAGAGACGCTTGGTGACTCTACCAGGTAATATAGACCTATAGATACAGAAATTTGTATCTCTTTGTGTGTATATATCTGACATCCATGAAATCACCTTTCACTGTTTCTGTGTATAGTACTGTTCATCTTATTGTTTTTTTTTGGGGAGGGTTTTTAAAGTTGGTAATTTGAGCTGTGTTTGGACTTTGAATTTTGTGTAGGGTTTTTGATCTGTTGATCATTTGTGGTTTTGGTTGTTGAATTATGTGTGATTCCTTGATTGAATTGATGAAAGTTGATTGAAGTTGACTTTGCGATCTTCTGGGTTTACTTTTAATTATTTTGGGGTTTTGGGTTTCTCTGTTCGAGTGAATTTATAGGCTTTGGTATGGTTATACGAGAATTTTATTACTGGTAAATTTTTATTTTTTTCTTAATTTACGAATAAAATTTAATTTTCTGAAAATATTCTGGAAATATGGAGTATTCATCTGTTTTCTTGACCATATGTGCAGTGTTCTGCTTTTATTTTTTTTTATTATCTTTTTTTTTTATAAAAAAACATTGGGTAAAAAGGTTCAATTTTTATTTTGAATTCTAGGAACTTAGGAAAATAAGTCTTTGTTCTTGTAGATCTTAATTAAAGATGGTTTATCTGGACTATATGGGCCGTGTGGTGGTTTATAGGTTTCCTGATAGGTCTGAATTAGGTTAATTTGAGGATTATTTAGGATTCCATGAGCTGGGGAGGAGAAATCAGAGTAAATAAGTGTTCTTTCCACTGATGTGATTTAACTTTACAAGGTTCTGATGAAAAAACAGTCTTTATGGGTTGATAAGGTGGGCAGAACTAGCATCTTATCTTTATTTTTCATGGGAAAAAGCTTTTATTTTTTTTTAATGTTTAGGGAAATTAAGCTTCTAATTTGGCAGATAATAATAAAGGATGAAGTTTGTGGAGTAGATAGTGATATAGGAAATGGAGTAAAAAAACATGACTTGAGAATTGTGTGAAACAAGTAACCTATCCAGTCAAGGCATTATTGATTGATTGAGACAAAAGGATTCCCTCAAAACAACTCAACTCCAACAAGCCTCTGTGGAAGAAGGTTTATGTCTGTTTGGTGGTGTGAATTGGGTGGTTTTGTTGTCAGGTTCAGTTTTGATGGATTAGTGTGGAGCAAATTAAAAGAGTTAGTAAACAACATTGGTCTTATCATCCATCTTTACAAAAGACTGATTTGAAGGTGTGATTTCACCACCCTTGCAACTTTTGTTAAAATTTGGTGGTTCAACATTAGCAAATTGTGGCTAAAAAAATGTTTCCATGCTTTGATAGGGGGCGAAATACCCAGTGCAGAAAAATTATCTATATATATAGATGTTCTTGATGTTTGCTTCAGCCAATAGTTGAGTTTTGGGAGTGGTTTATGATAGCAGGAATTTCTCTGTTCCTTTATATTCAAGTGATTTTGGTTATTGGTTTGCTAGAGTTCATTTGAGTATTATTTCTTTTGATTAGTTCACTACATACAGTATATAACTATAAACATTGTTCTATATATTCTTCTTTTCGATATTCTAACTTTCAGGCATAGCCATGAATTCTAAAGGTTTTTCAATTTTCTTTGACAACAGTCTCTTGTGGCTGATACTATATCTGCTTGAAGGGGTTTTGAATCCCTACTGATGCTTTCAGATCAAGATTGTGCTACACATTCCAAGTACGAATCAAATGCCATCTCTAAGAATGAAGACAAAGCTAGCCACATCCAGTTCGAAAGAAAAAAATGGTCTCCATGTCTGTCCAAATTCTAGTGTCATATCCAAGAGTTCTCTCTCTCGAACCAGAAGTGTGCAGAATGCAGACGAAGTTGCAGATCTGATTCACAATACTCATGATGGTAGGTTTTGTTCTATGTTATGGCTTTTCAGAATAAGAACTTTTTCGTTGTTATTGTGATGGTGTGAGATTGATGCTTTTCTCATCACCCACAAGTTTTACAATGTAACTCTCTGCTCTATGCTGACATTGCCATTTCTTTGTACTGCGCATTCTGGTTCAATCATCAGTTGCTTTAATTCTTGCAGTTCCTAGCTACTACAAAGTTCATCCACACCAAGTCGGAAGAAATGGTGATCATGCTAATGATTTGGTAGATGACCTTCTTGAAAAGCAACAGCCACCTGTTACTGATTCTGCAAACCTTGATACCACGGTAAATATGTCCTCGAGTGTTAACTATTAGTACCTGTTGCTTTACGTTTCATTTATAGTAGTCTTAATTTATTTATTCATTTCTTTCAACTATCTGGTGTATAATGGACTCAAATTCTTCCAAATATACACATATCTCTTGTCATGCATCTTCAGCTTGTTATATAATAAATTTATATAGTTCCCATTTTCCCGGTAAATGGTCATAAAGTGTTCTCATAAACATTATGGAGATACAGAAACTGAACATAGAAATTCATAGGAGAAACCATGGAACCAAAGAAAGGTCCACATTTAAGCTGTCTGATCTCTCCATATCTCTACTTCAGTGGTGTGTGAAGAAAACAGTATGTGAAAGGGCTGAGACACACGAGCATCAGGAAAAGTAGGCCATTTGTTTTTCTAGAGTCAAATTGAGCTTCATTTTGATTTTTGACATGAATTAAACCGAGCATCAGTACGAGAGTCAAATTGAGTAATCTTCATTTTGATATTTGACATGAATTAATCTGTTTTCTGAAATAAAATATATATGTAATATTTTTGGAAATGTCTAGTGTTATAGATGTTCAAAATCAGCACTAGAAGGTGCCACAATTACATAAAAAGTCGGAAAAAATGAAAAAAAAAAAAGATAAAAAAGAAAAAATGAAACTTGCTGGCTATCTGTACAAAAGATTTGATGAACTGTAACTGGGTTACACTATCATCTATCCATTTCTGTTTACACCAAAAAGATATCCACAAAATGCAATCTGACTTGATCTTCAAGACTGAGTTCTTTTGTCTTTATAAACATCTTTGTTTCTCTCTTTCCAAGCACACCACCATATGACTTCTGGTACTGTGTTCCATTCTGTCTTGATCTGCTTTGAAAGACCTTTCCTATGCTGAGATAGTACCTAGCATTACCCATTTGATTCCCAGAAATTTCAAGAGAAACTGCAACAACTGTGTGCTGATAGCAATGTAGAAATAAATGGTCAACAGACTCTTCTCTTTCTTCAGACATCTGTAAACTATTGAACTCCCCTTCTTTGAAGATTGTCTTGGGTTAAGCAAGTCTTCCTAGCCACCAACCATACAAAACATTTCGTTTCCATTGGTGCTATAGAGTTCCAAACTTGTTTCCAGAAACCAAAATGTTGCTAATAGGACTCCCTCGTGAGCAAAATTATTACATGCCCTTACAGTAAAGATGTCCTTGCTGTGTTCCTTTACAGGTAATATATTTTAACCAAATACATAAGAACCTTTAAACATAGATTTCATAATTGAATAAAACTGATTTGGGAAATTGTGGTCTGACAAATTTCATCTTGCAAAAAGTGAATGGGTCAGAACAAGACCCCAATGCAAAGGCTGCTGTAATGAGAGCCCAGATATCAGTCTATCACCATAACAAAAATTCATTATGGTCAAATCTTCTGACTAAAATATAATAATTTATCTCAGAAGTAACTAGTGCTTAAATACCCACAAGCACTTTAGTCTGGGATTTCAGTATCCAGTTGCTGAAGTGTTGGACACATTGACAGCCTTGTTACCCGTATAATAGGTCATTGATGGACTCCTTCAATCTATAGATGACTGTGTCGTTTCATGCTTTATCTTGTACGTTCCCATTGATTACCATTTGTTTCTAGCTGCTTTTGTTGAACTTAATTTGTGCTTGATTTTTTTGCTCAAGAAAAAGGATATGCACAAGTAGAGTAAAACAAAAGCCAACCCCAACTAGCTTGAGATTTAGGCATAGTTATTGTTGTTGAGTGCAACATAAACAGCTAGAAAGAAATAGATAATTCACGTTGTATAACAGTATAACTCAGATATTATTACTTTATTAGTTCACATAATATAGGGCTGGCTGACACTAGGATATGCGCGCTCCTATCCCCTGAAAGTTTTACACTTTAGTTTACTATGCCATACATGTGCCTGCATGCTGAAAGTTAACAATTTGATTTTTGATGTCTCTGCTGTCCTATCAGGTTTTGGAATCGGTGCAGGAGTCTACAGTAGTGATCTGCAAACCAAGTTCAGAGACAATCTTTTCACCTAGTGTGGAGCCTGTTAGTGGTGCGCACAGTGAGTCTGATATACCAAGTGATGGAGGTATACCTCCATTTTTGTTGGATTCTTTTGTTGATTATGAAATTCATATTCAGATTTTGTTTCTTCTCTTTGTCCTGAAAAAGTGCTTAGGCAAACCACAACCCATCCTTAAATTTGCTGTATTTCTTCTGTTCTTGAAAAGGATGTTGCCACACAGCCAAAAGCCCCCCGGGTCGTAGATGATAAGAGCTGGGGAGCACACCTCTCTCTCTCTCTCTGTTCTAGTTCTCGTGAAAAAGATCATTATTACATAAACTTATCGTATTTTTGGTTGCTTACAGCAAACAATGATTTTTATGTACCCCAATTGGAGACTGAAGATAGTGATAGCAGCAGAAGTTCGTGTGAACATCAGACGTGCAATGTTTCAGATTTCTACATCTCTGATATGATTGTTTCTT</genome_strand>
        <mrna_strand>AGAGAGAGAGAAGCGCGCGTCTAGAGAGAGAAAGTGAGAGAGACGCTTGGTGACTCTACCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTTGTGGCTGATACTATATCTGCTTGAAGGGGTTTTGAATCCCTACTGATGCTTTCAGATCAAGATTGTGCTACAAATTCCAAGTACGAATCAAATGCCATCTCTAAGAATGAAGACAAAGCTAGCCACATCCAGTTCGAAAGAAAAAAATGGTCTCCATGTCTGTCCAAATTCTAGTGTCATATCCAAGAGTTCTCTCTCTCGAACCAGAAGTGTGCAGAATGCAGACGAAGTTGCAGATCTGATTCACAATACTCATGATG...........................................................................................................................................................................................TTCCTAGCTACTACAAAGTTCATCCACACCAAGTCGGAAGAAATGGTGATCATGCTAATGATTTGGTAGATGACCTTCTTGAAAAGCAACAGCCACCTGTTACTGATTCTGCAAACCTTGATACCACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGGAATCGGTGCAGGAGTCTACAGTAGTGATCTGCAAACCAAGTTCAGAGACAATCTTTTCACCTAGTGTGGAGCCTGTTAGTGGTGCGCACAGTGAGTCTGATATACCAAGTGATGGAG.........................................................................................................................................................................................................................................................................................CAAACAATGATTTTTATGTACCCCAATTGGAGACTGAAGATAGTGATAGCAGCAGAAGTTCGTGTGAACATCAGACGTGCAATGTTTCAGATTTCTACATCTCTGATATGATTGTTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E208573" ref_strand="+" ref_description="SGN-E208573 [cLEC-39-H4]">
      <seq>gtctagagagagaaagtgagagagacgcttggtgactctaccagtctcttgtggctgatactatatctgcttgaaggggttttgaatccctactgatgctttcagatcaagattgtgctacaaattccaagtacgaatcaaatgccatctctaagaatgaagacaaagctagccacatccagttcgaaagaaaaaaatggtctccatgtctgtccaaattctagtgtcatatccaagagttctctctctcgaaccagaagtgtgcagaatgcagacgaagttgcagatctgattcacaatactcatgatgttcctagctactacaaagttcatccacaccaagtcggaagaaatggtgatcatgctaatgatttggtagatgaccttcttgaaaagcaacagccacctgttactgattctgcaaaccttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="49177" stop="51986"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49477" g_stop="49520" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="44" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49521" i_stop="51113" i_length="1593">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.326" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51114" g_stop="51379" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="310" r_length="266" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="51380" i_stop="51566" i_length="187">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.923" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="51567" g_stop="51686" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="430" r_length="120" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E208573" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>430</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E208573" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49477" e_stop="49520"/>
          <exon e_start="51114" e_stop="51379"/>
          <exon e_start="51567" e_stop="51686"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTAGAGAGAGAAAGTGAGAGAGACGCTTGGTGACTCTACCAGGTAATATAGACCTATAGATACAGAAATTTGTATCTCTTTGTGTGTATATATCTGACATCCATGAAATCACCTTTCACTGTTTCTGTGTATAGTACTGTTCATCTTATTGTTTTTTTTTGGGGAGGGTTTTTAAAGTTGGTAATTTGAGCTGTGTTTGGACTTTGAATTTTGTGTAGGGTTTTTGATCTGTTGATCATTTGTGGTTTTGGTTGTTGAATTATGTGTGATTCCTTGATTGAATTGATGAAAGTTGATTGAAGTTGACTTTGCGATCTTCTGGGTTTACTTTTAATTATTTTGGGGTTTTGGGTTTCTCTGTTCGAGTGAATTTATAGGCTTTGGTATGGTTATACGAGAATTTTATTACTGGTAAATTTTTATTTTTTTCTTAATTTACGAATAAAATTTAATTTTCTGAAAATATTCTGGAAATATGGAGTATTCATCTGTTTTCTTGACCATATGTGCAGTGTTCTGCTTTTATTTTTTTTTATTATCTTTTTTTTTTATAAAAAAACATTGGGTAAAAAGGTTCAATTTTTATTTTGAATTCTAGGAACTTAGGAAAATAAGTCTTTGTTCTTGTAGATCTTAATTAAAGATGGTTTATCTGGACTATATGGGCCGTGTGGTGGTTTATAGGTTTCCTGATAGGTCTGAATTAGGTTAATTTGAGGATTATTTAGGATTCCATGAGCTGGGGAGGAGAAATCAGAGTAAATAAGTGTTCTTTCCACTGATGTGATTTAACTTTACAAGGTTCTGATGAAAAAACAGTCTTTATGGGTTGATAAGGTGGGCAGAACTAGCATCTTATCTTTATTTTTCATGGGAAAAAGCTTTTATTTTTTTTTAATGTTTAGGGAAATTAAGCTTCTAATTTGGCAGATAATAATAAAGGATGAAGTTTGTGGAGTAGATAGTGATATAGGAAATGGAGTAAAAAAACATGACTTGAGAATTGTGTGAAACAAGTAACCTATCCAGTCAAGGCATTATTGATTGATTGAGACAAAAGGATTCCCTCAAAACAACTCAACTCCAACAAGCCTCTGTGGAAGAAGGTTTATGTCTGTTTGGTGGTGTGAATTGGGTGGTTTTGTTGTCAGGTTCAGTTTTGATGGATTAGTGTGGAGCAAATTAAAAGAGTTAGTAAACAACATTGGTCTTATCATCCATCTTTACAAAAGACTGATTTGAAGGTGTGATTTCACCACCCTTGCAACTTTTGTTAAAATTTGGTGGTTCAACATTAGCAAATTGTGGCTAAAAAAATGTTTCCATGCTTTGATAGGGGGCGAAATACCCAGTGCAGAAAAATTATCTATATATATAGATGTTCTTGATGTTTGCTTCAGCCAATAGTTGAGTTTTGGGAGTGGTTTATGATAGCAGGAATTTCTCTGTTCCTTTATATTCAAGTGATTTTGGTTATTGGTTTGCTAGAGTTCATTTGAGTATTATTTCTTTTGATTAGTTCACTACATACAGTATATAACTATAAACATTGTTCTATATATTCTTCTTTTCGATATTCTAACTTTCAGGCATAGCCATGAATTCTAAAGGTTTTTCAATTTTCTTTGACAACAGTCTCTTGTGGCTGATACTATATCTGCTTGAAGGGGTTTTGAATCCCTACTGATGCTTTCAGATCAAGATTGTGCTACACATTCCAAGTACGAATCAAATGCCATCTCTAAGAATGAAGACAAAGCTAGCCACATCCAGTTCGAAAGAAAAAAATGGTCTCCATGTCTGTCCAAATTCTAGTGTCATATCCAAGAGTTCTCTCTCTCGAACCAGAAGTGTGCAGAATGCAGACGAAGTTGCAGATCTGATTCACAATACTCATGATGGTAGGTTTTGTTCTATGTTATGGCTTTTCAGAATAAGAACTTTTTCGTTGTTATTGTGATGGTGTGAGATTGATGCTTTTCTCATCACCCACAAGTTTTACAATGTAACTCTCTGCTCTATGCTGACATTGCCATTTCTTTGTACTGCGCATTCTGGTTCAATCATCAGTTGCTTTAATTCTTGCAGTTCCTAGCTACTACAAAGTTCATCCACACCAAGTCGGAAGAAATGGTGATCATGCTAATGATTTGGTAGATGACCTTCTTGAAAAGCAACAGCCACCTGTTACTGATTCTGCAAACCTTG</genome_strand>
        <mrna_strand>GTCTAGAGAGAGAAAGTGAGAGAGACGCTTGGTGACTCTACCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTTGTGGCTGATACTATATCTGCTTGAAGGGGTTTTGAATCCCTACTGATGCTTTCAGATCAAGATTGTGCTACAAATTCCAAGTACGAATCAAATGCCATCTCTAAGAATGAAGACAAAGCTAGCCACATCCAGTTCGAAAGAAAAAAATGGTCTCCATGTCTGTCCAAATTCTAGTGTCATATCCAAGAGTTCTCTCTCTCGAACCAGAAGTGTGCAGAATGCAGACGAAGTTGCAGATCTGATTCACAATACTCATGATG...........................................................................................................................................................................................TTCCTAGCTACTACAAAGTTCATCCACACCAAGTCGGAAGAAATGGTGATCATGCTAATGATTTGGTAGATGACCTTCTTGAAAAGCAACAGCCACCTGTTACTGATTCTGCAAACCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E365832" ref_strand="+" ref_description="SGN-E365832 [cLPT-8-K24]">
      <seq>tagagagagaaagtgagagagacgcttggtgactctaccagtctcttgtggctgatactatatctgcttgaaggggttttgaatccctactgatgctttcagatcaagattgtgctagacatcccaagtacgaatcaaatgccatcactaagaatgaagacaaagctagccacatccagttcgaaagaaaaaaatggtctccatgtctgtccaaattctagtgtcatatccaagagttctctctctcgaaccagaagtgtgcagaatgcagacgaagttgcagatctgattcataatactcatgatgttcctagctactacaaagtccatccacaccaagtcggaagaaatggtgatcatgctaatgatttggtagatgacctgcttgaaaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="49180" stop="51953"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49480" g_stop="49520" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="41" r_length="41" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49521" i_stop="51113" i_length="1593">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.326" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51114" g_stop="51379" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="307" r_length="266" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="51380" i_stop="51566" i_length="187">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.923" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="51567" g_stop="51653" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="394" r_length="87" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E365832" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>394</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E365832" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49480" e_stop="49520"/>
          <exon e_start="51114" e_stop="51379"/>
          <exon e_start="51567" e_stop="51653"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGAGAGAGAAAGTGAGAGAGACGCTTGGTGACTCTACCAGGTAATATAGACCTATAGATACAGAAATTTGTATCTCTTTGTGTGTATATATCTGACATCCATGAAATCACCTTTCACTGTTTCTGTGTATAGTACTGTTCATCTTATTGTTTTTTTTTGGGGAGGGTTTTTAAAGTTGGTAATTTGAGCTGTGTTTGGACTTTGAATTTTGTGTAGGGTTTTTGATCTGTTGATCATTTGTGGTTTTGGTTGTTGAATTATGTGTGATTCCTTGATTGAATTGATGAAAGTTGATTGAAGTTGACTTTGCGATCTTCTGGGTTTACTTTTAATTATTTTGGGGTTTTGGGTTTCTCTGTTCGAGTGAATTTATAGGCTTTGGTATGGTTATACGAGAATTTTATTACTGGTAAATTTTTATTTTTTTCTTAATTTACGAATAAAATTTAATTTTCTGAAAATATTCTGGAAATATGGAGTATTCATCTGTTTTCTTGACCATATGTGCAGTGTTCTGCTTTTATTTTTTTTTATTATCTTTTTTTTTTATAAAAAAACATTGGGTAAAAAGGTTCAATTTTTATTTTGAATTCTAGGAACTTAGGAAAATAAGTCTTTGTTCTTGTAGATCTTAATTAAAGATGGTTTATCTGGACTATATGGGCCGTGTGGTGGTTTATAGGTTTCCTGATAGGTCTGAATTAGGTTAATTTGAGGATTATTTAGGATTCCATGAGCTGGGGAGGAGAAATCAGAGTAAATAAGTGTTCTTTCCACTGATGTGATTTAACTTTACAAGGTTCTGATGAAAAAACAGTCTTTATGGGTTGATAAGGTGGGCAGAACTAGCATCTTATCTTTATTTTTCATGGGAAAAAGCTTTTATTTTTTTTTAATGTTTAGGGAAATTAAGCTTCTAATTTGGCAGATAATAATAAAGGATGAAGTTTGTGGAGTAGATAGTGATATAGGAAATGGAGTAAAAAAACATGACTTGAGAATTGTGTGAAACAAGTAACCTATCCAGTCAAGGCATTATTGATTGATTGAGACAAAAGGATTCCCTCAAAACAACTCAACTCCAACAAGCCTCTGTGGAAGAAGGTTTATGTCTGTTTGGTGGTGTGAATTGGGTGGTTTTGTTGTCAGGTTCAGTTTTGATGGATTAGTGTGGAGCAAATTAAAAGAGTTAGTAAACAACATTGGTCTTATCATCCATCTTTACAAAAGACTGATTTGAAGGTGTGATTTCACCACCCTTGCAACTTTTGTTAAAATTTGGTGGTTCAACATTAGCAAATTGTGGCTAAAAAAATGTTTCCATGCTTTGATAGGGGGCGAAATACCCAGTGCAGAAAAATTATCTATATATATAGATGTTCTTGATGTTTGCTTCAGCCAATAGTTGAGTTTTGGGAGTGGTTTATGATAGCAGGAATTTCTCTGTTCCTTTATATTCAAGTGATTTTGGTTATTGGTTTGCTAGAGTTCATTTGAGTATTATTTCTTTTGATTAGTTCACTACATACAGTATATAACTATAAACATTGTTCTATATATTCTTCTTTTCGATATTCTAACTTTCAGGCATAGCCATGAATTCTAAAGGTTTTTCAATTTTCTTTGACAACAGTCTCTTGTGGCTGATACTATATCTGCTTGAAGGGGTTTTGAATCCCTACTGATGCTTTCAGATCAAGATTGTGCTACACATTCCAAGTACGAATCAAATGCCATCTCTAAGAATGAAGACAAAGCTAGCCACATCCAGTTCGAAAGAAAAAAATGGTCTCCATGTCTGTCCAAATTCTAGTGTCATATCCAAGAGTTCTCTCTCTCGAACCAGAAGTGTGCAGAATGCAGACGAAGTTGCAGATCTGATTCACAATACTCATGATGGTAGGTTTTGTTCTATGTTATGGCTTTTCAGAATAAGAACTTTTTCGTTGTTATTGTGATGGTGTGAGATTGATGCTTTTCTCATCACCCACAAGTTTTACAATGTAACTCTCTGCTCTATGCTGACATTGCCATTTCTTTGTACTGCGCATTCTGGTTCAATCATCAGTTGCTTTAATTCTTGCAGTTCCTAGCTACTACAAAGTTCATCCACACCAAGTCGGAAGAAATGGTGATCATGCTAATGATTTGGTAGATGACCTTCTTGAAAAGC</genome_strand>
        <mrna_strand>TAGAGAGAGAAAGTGAGAGAGACGCTTGGTGACTCTACCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTTGTGGCTGATACTATATCTGCTTGAAGGGGTTTTGAATCCCTACTGATGCTTTCAGATCAAGATTGTGCTAGACATCCCAAGTACGAATCAAATGCCATCACTAAGAATGAAGACAAAGCTAGCCACATCCAGTTCGAAAGAAAAAAATGGTCTCCATGTCTGTCCAAATTCTAGTGTCATATCCAAGAGTTCTCTCTCTCGAACCAGAAGTGTGCAGAATGCAGACGAAGTTGCAGATCTGATTCATAATACTCATGATG...........................................................................................................................................................................................TTCCTAGCTACTACAAAGTCCATCCACACCAAGTCGGAAGAAATGGTGATCATGCTAATGATTTGGTAGATGACCTGCTTGAAAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E367003" ref_strand="+" ref_description="SGN-E367003 [cLPT-6-J1]">
      <seq>aaagtgagagatacgcttggttactctaccagtctcttgtggctgatactatatctgcttgaaggggttttgaatccctactgatgctttcagatcaagattgtgctagacatcccaagtacgaatcaaatgccatcactaagaatgaagacaaagctagccacatccagttcgaaagaaaaaaatggtctccatgtctgtccaaattctagtgtcatatccaagagttctctctctcgaaccagaagtgtgcagaatgcagacgaagttgcagatctgattcataatactcatgatgttcctagctactacaaagtccatccacaccaagtcggaagaaatggtgatcatgctaatgatttggtagatgacctgcttgaaaagcaacagccacctgttactgattctgcaaaccttgatacaacggttttggaatcggtgcacgagtctacagtagttatctgcaaaccaagttcagggacaatcttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="50809" stop="54049"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51114" g_stop="51379" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="298" r_length="266" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51380" i_stop="51566" i_length="187">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.923" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51567" g_stop="51694" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="299" r_stop="426" r_length="128" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="51695" i_stop="53684" i_length="1990">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.933" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53685" g_stop="53749" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="491" r_length="65" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E367003" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>459</cumulative_length_of_scored_exons>
        <coverage percentage="0.935" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E367003" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51114" e_stop="51379"/>
          <exon e_start="51567" e_stop="51694"/>
          <exon e_start="53685" e_stop="53749"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCTTGTGGCTGATACTATATCTGCTTGAAGGGGTTTTGAATCCCTACTGATGCTTTCAGATCAAGATTGTGCTACACATTCCAAGTACGAATCAAATGCCATCTCTAAGAATGAAGACAAAGCTAGCCACATCCAGTTCGAAAGAAAAAAATGGTCTCCATGTCTGTCCAAATTCTAGTGTCATATCCAAGAGTTCTCTCTCTCGAACCAGAAGTGTGCAGAATGCAGACGAAGTTGCAGATCTGATTCACAATACTCATGATGGTAGGTTTTGTTCTATGTTATGGCTTTTCAGAATAAGAACTTTTTCGTTGTTATTGTGATGGTGTGAGATTGATGCTTTTCTCATCACCCACAAGTTTTACAATGTAACTCTCTGCTCTATGCTGACATTGCCATTTCTTTGTACTGCGCATTCTGGTTCAATCATCAGTTGCTTTAATTCTTGCAGTTCCTAGCTACTACAAAGTTCATCCACACCAAGTCGGAAGAAATGGTGATCATGCTAATGATTTGGTAGATGACCTTCTTGAAAAGCAACAGCCACCTGTTACTGATTCTGCAAACCTTGATACCACGGTAAATATGTCCTCGAGTGTTAACTATTAGTACCTGTTGCTTTACGTTTCATTTATAGTAGTCTTAATTTATTTATTCATTTCTTTCAACTATCTGGTGTATAATGGACTCAAATTCTTCCAAATATACACATATCTCTTGTCATGCATCTTCAGCTTGTTATATAATAAATTTATATAGTTCCCATTTTCCCGGTAAATGGTCATAAAGTGTTCTCATAAACATTATGGAGATACAGAAACTGAACATAGAAATTCATAGGAGAAACCATGGAACCAAAGAAAGGTCCACATTTAAGCTGTCTGATCTCTCCATATCTCTACTTCAGTGGTGTGTGAAGAAAACAGTATGTGAAAGGGCTGAGACACACGAGCATCAGGAAAAGTAGGCCATTTGTTTTTCTAGAGTCAAATTGAGCTTCATTTTGATTTTTGACATGAATTAAACCGAGCATCAGTACGAGAGTCAAATTGAGTAATCTTCATTTTGATATTTGACATGAATTAATCTGTTTTCTGAAATAAAATATATATGTAATATTTTTGGAAATGTCTAGTGTTATAGATGTTCAAAATCAGCACTAGAAGGTGCCACAATTACATAAAAAGTCGGAAAAAATGAAAAAAAAAAAAGATAAAAAAGAAAAAATGAAACTTGCTGGCTATCTGTACAAAAGATTTGATGAACTGTAACTGGGTTACACTATCATCTATCCATTTCTGTTTACACCAAAAAGATATCCACAAAATGCAATCTGACTTGATCTTCAAGACTGAGTTCTTTTGTCTTTATAAACATCTTTGTTTCTCTCTTTCCAAGCACACCACCATATGACTTCTGGTACTGTGTTCCATTCTGTCTTGATCTGCTTTGAAAGACCTTTCCTATGCTGAGATAGTACCTAGCATTACCCATTTGATTCCCAGAAATTTCAAGAGAAACTGCAACAACTGTGTGCTGATAGCAATGTAGAAATAAATGGTCAACAGACTCTTCTCTTTCTTCAGACATCTGTAAACTATTGAACTCCCCTTCTTTGAAGATTGTCTTGGGTTAAGCAAGTCTTCCTAGCCACCAACCATACAAAACATTTCGTTTCCATTGGTGCTATAGAGTTCCAAACTTGTTTCCAGAAACCAAAATGTTGCTAATAGGACTCCCTCGTGAGCAAAATTATTACATGCCCTTACAGTAAAGATGTCCTTGCTGTGTTCCTTTACAGGTAATATATTTTAACCAAATACATAAGAACCTTTAAACATAGATTTCATAATTGAATAAAACTGATTTGGGAAATTGTGGTCTGACAAATTTCATCTTGCAAAAAGTGAATGGGTCAGAACAAGACCCCAATGCAAAGGCTGCTGTAATGAGAGCCCAGATATCAGTCTATCACCATAACAAAAATTCATTATGGTCAAATCTTCTGACTAAAATATAATAATTTATCTCAGAAGTAACTAGTGCTTAAATACCCACAAGCACTTTAGTCTGGGATTTCAGTATCCAGTTGCTGAAGTGTTGGACACATTGACAGCCTTGTTACCCGTATAATAGGTCATTGATGGACTCCTTCAATCTATAGATGACTGTGTCGTTTCATGCTTTATCTTGTACGTTCCCATTGATTACCATTTGTTTCTAGCTGCTTTTGTTGAACTTAATTTGTGCTTGATTTTTTTGCTCAAGAAAAAGGATATGCACAAGTAGAGTAAAACAAAAGCCAACCCCAACTAGCTTGAGATTTAGGCATAGTTATTGTTGTTGAGTGCAACATAAACAGCTAGAAAGAAATAGATAATTCACGTTGTATAACAGTATAACTCAGATATTATTACTTTATTAGTTCACATAATATAGGGCTGGCTGACACTAGGATATGCGCGCTCCTATCCCCTGAAAGTTTTACACTTTAGTTTACTATGCCATACATGTGCCTGCATGCTGAAAGTTAACAATTTGATTTTTGATGTCTCTGCTGTCCTATCAGGTTTTGGAATCGGTGCAGGAGTCTACAGTAGTGATCTGCAAACCAAGTTCAGAGACAATCTTTTC</genome_strand>
        <mrna_strand>TCTCTTGTGGCTGATACTATATCTGCTTGAAGGGGTTTTGAATCCCTACTGATGCTTTCAGATCAAGATTGTGCTAGACATCCCAAGTACGAATCAAATGCCATCACTAAGAATGAAGACAAAGCTAGCCACATCCAGTTCGAAAGAAAAAAATGGTCTCCATGTCTGTCCAAATTCTAGTGTCATATCCAAGAGTTCTCTCTCTCGAACCAGAAGTGTGCAGAATGCAGACGAAGTTGCAGATCTGATTCATAATACTCATGATG...........................................................................................................................................................................................TTCCTAGCTACTACAAAGTCCATCCACACCAAGTCGGAAGAAATGGTGATCATGCTAATGATTTGGTAGATGACCTGCTTGAAAAGCAACAGCCACCTGTTACTGATTCTGCAAACCTTGATACAACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGGAATCGGTGCACGAGTCTACAGTAGTTATCTGCAAACCAAGTTCAGGGACAATCTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E397805" ref_strand="+" ref_description="SGN-E397805 [TUS-27-F4]">
      <seq>ctaaactatccttatcctattcgaaataaaaatatggtctccatgtctgtcctcattctagtgtcttatcctagatgtctctctctccttgctaaactgtgcagaatgcaaactaatttgcaaatctgattcacattattcatgatagttcctatcaactcctgatttcatcctcactatgtctgaataaatggtgatcatgctaatgatttggtatatgaccttcttgaaaagcaacagccacctgttactgattctgcaaaccttgataccacggttttggaatcggtgcaggagtctacagtagtgatctgcaaaccaagttcagagacaatcttttcacctagtgtggagcctgttagtggtgcgcacagtgagtctgatataccaagtgatggagcaaacaatgatttttatgtaccccaattggagactgaagatagtgataacaacagaaattcgtgtgaacatcatacgtgcaatgtttcatatttctacatctctgatatgattgtttcttgtttggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="50934" stop="54516"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51233" g_stop="51379" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="148" r_length="148" r_score="0.796"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51380" i_stop="51566" i_length="187">
            <donor d_prob="0.999" d_score="0.84"/>
            <acceptor a_prob="0.923" a_score="0.78"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51567" g_stop="51694" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="276" r_length="128" r_score="0.906"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="51695" i_stop="53684" i_length="1990">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.933" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53685" g_stop="53808" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="400" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53809" i_stop="54089" i_length="281">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54090" g_stop="54216" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="527" r_length="127" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E397805" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E397805" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51233" e_stop="51379"/>
          <exon e_start="51567" e_stop="51694"/>
          <exon e_start="53685" e_stop="53808"/>
          <exon e_start="54090" e_stop="54216"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAGCTAGCCACATCCAGTTCGAAAGAAAAAAATGGTCTCCATGTCTGTCCAAATTCTAGTGTCATATCCAAGAGTTCTCTCTCTCGAACCAGAAGTGTGCAGAATGCAGACGAAGTTGCAGATCTGATTCACAATACTCATGAT-GGTAGGTTTTGTTCTATGTTATGGCTTTTCAGAATAAGAACTTTTTCGTTGTTATTGTGATGGTGTGAGATTGATGCTTTTCTCATCACCCACAAGTTTTACAATGTAACTCTCTGCTCTATGCTGACATTGCCATTTCTTTGTACTGCGCATTCTGGTTCAATCATCAGTTGCTTTAATTCTTGCAGTTCCTAGCTACTACAAAGTTCATCCACACCAAGTCGGAAGAAATGGTGATCATGCTAATGATTTGGTAGATGACCTTCTTGAAAAGCAACAGCCACCTGTTACTGATTCTGCAAACCTTGATACCACGGTAAATATGTCCTCGAGTGTTAACTATTAGTACCTGTTGCTTTACGTTTCATTTATAGTAGTCTTAATTTATTTATTCATTTCTTTCAACTATCTGGTGTATAATGGACTCAAATTCTTCCAAATATACACATATCTCTTGTCATGCATCTTCAGCTTGTTATATAATAAATTTATATAGTTCCCATTTTCCCGGTAAATGGTCATAAAGTGTTCTCATAAACATTATGGAGATACAGAAACTGAACATAGAAATTCATAGGAGAAACCATGGAACCAAAGAAAGGTCCACATTTAAGCTGTCTGATCTCTCCATATCTCTACTTCAGTGGTGTGTGAAGAAAACAGTATGTGAAAGGGCTGAGACACACGAGCATCAGGAAAAGTAGGCCATTTGTTTTTCTAGAGTCAAATTGAGCTTCATTTTGATTTTTGACATGAATTAAACCGAGCATCAGTACGAGAGTCAAATTGAGTAATCTTCATTTTGATATTTGACATGAATTAATCTGTTTTCTGAAATAAAATATATATGTAATATTTTTGGAAATGTCTAGTGTTATAGATGTTCAAAATCAGCACTAGAAGGTGCCACAATTACATAAAAAGTCGGAAAAAATGAAAAAAAAAAAAGATAAAAAAGAAAAAATGAAACTTGCTGGCTATCTGTACAAAAGATTTGATGAACTGTAACTGGGTTACACTATCATCTATCCATTTCTGTTTACACCAAAAAGATATCCACAAAATGCAATCTGACTTGATCTTCAAGACTGAGTTCTTTTGTCTTTATAAACATCTTTGTTTCTCTCTTTCCAAGCACACCACCATATGACTTCTGGTACTGTGTTCCATTCTGTCTTGATCTGCTTTGAAAGACCTTTCCTATGCTGAGATAGTACCTAGCATTACCCATTTGATTCCCAGAAATTTCAAGAGAAACTGCAACAACTGTGTGCTGATAGCAATGTAGAAATAAATGGTCAACAGACTCTTCTCTTTCTTCAGACATCTGTAAACTATTGAACTCCCCTTCTTTGAAGATTGTCTTGGGTTAAGCAAGTCTTCCTAGCCACCAACCATACAAAACATTTCGTTTCCATTGGTGCTATAGAGTTCCAAACTTGTTTCCAGAAACCAAAATGTTGCTAATAGGACTCCCTCGTGAGCAAAATTATTACATGCCCTTACAGTAAAGATGTCCTTGCTGTGTTCCTTTACAGGTAATATATTTTAACCAAATACATAAGAACCTTTAAACATAGATTTCATAATTGAATAAAACTGATTTGGGAAATTGTGGTCTGACAAATTTCATCTTGCAAAAAGTGAATGGGTCAGAACAAGACCCCAATGCAAAGGCTGCTGTAATGAGAGCCCAGATATCAGTCTATCACCATAACAAAAATTCATTATGGTCAAATCTTCTGACTAAAATATAATAATTTATCTCAGAAGTAACTAGTGCTTAAATACCCACAAGCACTTTAGTCTGGGATTTCAGTATCCAGTTGCTGAAGTGTTGGACACATTGACAGCCTTGTTACCCGTATAATAGGTCATTGATGGACTCCTTCAATCTATAGATGACTGTGTCGTTTCATGCTTTATCTTGTACGTTCCCATTGATTACCATTTGTTTCTAGCTGCTTTTGTTGAACTTAATTTGTGCTTGATTTTTTTGCTCAAGAAAAAGGATATGCACAAGTAGAGTAAAACAAAAGCCAACCCCAACTAGCTTGAGATTTAGGCATAGTTATTGTTGTTGAGTGCAACATAAACAGCTAGAAAGAAATAGATAATTCACGTTGTATAACAGTATAACTCAGATATTATTACTTTATTAGTTCACATAATATAGGGCTGGCTGACACTAGGATATGCGCGCTCCTATCCCCTGAAAGTTTTACACTTTAGTTTACTATGCCATACATGTGCCTGCATGCTGAAAGTTAACAATTTGATTTTTGATGTCTCTGCTGTCCTATCAGGTTTTGGAATCGGTGCAGGAGTCTACAGTAGTGATCTGCAAACCAAGTTCAGAGACAATCTTTTCACCTAGTGTGGAGCCTGTTAGTGGTGCGCACAGTGAGTCTGATATACCAAGTGATGGAGGTATACCTCCATTTTTGTTGGATTCTTTTGTTGATTATGAAATTCATATTCAGATTTTGTTTCTTCTCTTTGTCCTGAAAAAGTGCTTAGGCAAACCACAACCCATCCTTAAATTTGCTGTATTTCTTCTGTTCTTGAAAAGGATGTTGCCACACAGCCAAAAGCCCCCCGGGTCGTAGATGATAAGAGCTGGGGAGCACACCTCTCTCTCTCTCTCTGTTCTAGTTCTCGTGAAAAAGATCATTATTACATAAACTTATCGTATTTTTGGTTGCTTACAGCAAACAATGATTTTTATGTACCCCAATTGGAGACTGAAGATAGTGATAGCAGCAGAAGTTCGTGTGAACATCAGACGTGCAATGTTTCAGATTTCTACATCTCTGATATGATTGTTTCTTGTTTGGC</genome_strand>
        <mrna_strand>CTAAACTATCCTTATCCTATTCGAAATAAAAATATGGTCTCCATGTCTGTCCTCATTCTAGTGTCTTATCCTAGATGTCTCTCTCTCCTTGCTAAACTGTGCAGAATGCAAACTAATTTGCAAATCTGATTCACATTATTCATGATAG...........................................................................................................................................................................................TTCCTATCAACTCCTGATTTCATCCTCACTATGTCTGAATAAATGGTGATCATGCTAATGATTTGGTATATGACCTTCTTGAAAAGCAACAGCCACCTGTTACTGATTCTGCAAACCTTGATACCACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGGAATCGGTGCAGGAGTCTACAGTAGTGATCTGCAAACCAAGTTCAGAGACAATCTTTTCACCTAGTGTGGAGCCTGTTAGTGGTGCGCACAGTGAGTCTGATATACCAAGTGATGGAG.........................................................................................................................................................................................................................................................................................CAAACAATGATTTTTATGTACCCCAATTGGAGACTGAAGATAGTGATAACAACAGAAATTCGTGTGAACATCATACGTGCAATGTTTCATATTTCTACATCTCTGATATGATTGTTTCTTGTTTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E270289" ref_strand="+" ref_description="SGN-E270289 [cLEM-1-D19]">
      <seq>aaagctagccacatccagttcgaaagaaaaaaatggtctccatgtctgtccaaattctagtgtcatatccaagagttctctctctcgaaccagaagtgtgcagaatgcagacgaagttgcagatctgattcacaatactcatgatgttcctagctactacaaagttcatccacaccaagtcggaagaaatggtgatcatgctaatgatttggtagatgaccttcttgaaaagcaacagccacctgttactgattctgcaaaccttgataccacggttttggaatcggtgcaggagtctacagtagtgatctgcaaaccaagttcagagacaatcttttcacctagtgtggagcctgttagtggtgcgcacagtgagtctgatataccaagtgatggagcaaacaatgatttttatgtaccccaattggagactgaagatagtgatagcagcagaagttcgtgtgaacatcagacgtgcaatgtttcagatttctacatctctgatatgattgtttcttgtttggctgttgagggtgaaaccatctatgataacagtttgactgacaggttcttggctgattacaagtgtgaagaaccaaatattttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="50934" stop="54598"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51234" g_stop="51379" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="146" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51380" i_stop="51566" i_length="187">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.923" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51567" g_stop="51694" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="274" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="51695" i_stop="53684" i_length="1990">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.933" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53685" g_stop="53808" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="398" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53809" i_stop="54089" i_length="281">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54090" g_stop="54298" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="399" r_stop="607" r_length="209" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E270289" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E270289" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51234" e_stop="51379"/>
          <exon e_start="51567" e_stop="51694"/>
          <exon e_start="53685" e_stop="53808"/>
          <exon e_start="54090" e_stop="54298"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGCTAGCCACATCCAGTTCGAAAGAAAAAAATGGTCTCCATGTCTGTCCAAATTCTAGTGTCATATCCAAGAGTTCTCTCTCTCGAACCAGAAGTGTGCAGAATGCAGACGAAGTTGCAGATCTGATTCACAATACTCATGATGGTAGGTTTTGTTCTATGTTATGGCTTTTCAGAATAAGAACTTTTTCGTTGTTATTGTGATGGTGTGAGATTGATGCTTTTCTCATCACCCACAAGTTTTACAATGTAACTCTCTGCTCTATGCTGACATTGCCATTTCTTTGTACTGCGCATTCTGGTTCAATCATCAGTTGCTTTAATTCTTGCAGTTCCTAGCTACTACAAAGTTCATCCACACCAAGTCGGAAGAAATGGTGATCATGCTAATGATTTGGTAGATGACCTTCTTGAAAAGCAACAGCCACCTGTTACTGATTCTGCAAACCTTGATACCACGGTAAATATGTCCTCGAGTGTTAACTATTAGTACCTGTTGCTTTACGTTTCATTTATAGTAGTCTTAATTTATTTATTCATTTCTTTCAACTATCTGGTGTATAATGGACTCAAATTCTTCCAAATATACACATATCTCTTGTCATGCATCTTCAGCTTGTTATATAATAAATTTATATAGTTCCCATTTTCCCGGTAAATGGTCATAAAGTGTTCTCATAAACATTATGGAGATACAGAAACTGAACATAGAAATTCATAGGAGAAACCATGGAACCAAAGAAAGGTCCACATTTAAGCTGTCTGATCTCTCCATATCTCTACTTCAGTGGTGTGTGAAGAAAACAGTATGTGAAAGGGCTGAGACACACGAGCATCAGGAAAAGTAGGCCATTTGTTTTTCTAGAGTCAAATTGAGCTTCATTTTGATTTTTGACATGAATTAAACCGAGCATCAGTACGAGAGTCAAATTGAGTAATCTTCATTTTGATATTTGACATGAATTAATCTGTTTTCTGAAATAAAATATATATGTAATATTTTTGGAAATGTCTAGTGTTATAGATGTTCAAAATCAGCACTAGAAGGTGCCACAATTACATAAAAAGTCGGAAAAAATGAAAAAAAAAAAAGATAAAAAAGAAAAAATGAAACTTGCTGGCTATCTGTACAAAAGATTTGATGAACTGTAACTGGGTTACACTATCATCTATCCATTTCTGTTTACACCAAAAAGATATCCACAAAATGCAATCTGACTTGATCTTCAAGACTGAGTTCTTTTGTCTTTATAAACATCTTTGTTTCTCTCTTTCCAAGCACACCACCATATGACTTCTGGTACTGTGTTCCATTCTGTCTTGATCTGCTTTGAAAGACCTTTCCTATGCTGAGATAGTACCTAGCATTACCCATTTGATTCCCAGAAATTTCAAGAGAAACTGCAACAACTGTGTGCTGATAGCAATGTAGAAATAAATGGTCAACAGACTCTTCTCTTTCTTCAGACATCTGTAAACTATTGAACTCCCCTTCTTTGAAGATTGTCTTGGGTTAAGCAAGTCTTCCTAGCCACCAACCATACAAAACATTTCGTTTCCATTGGTGCTATAGAGTTCCAAACTTGTTTCCAGAAACCAAAATGTTGCTAATAGGACTCCCTCGTGAGCAAAATTATTACATGCCCTTACAGTAAAGATGTCCTTGCTGTGTTCCTTTACAGGTAATATATTTTAACCAAATACATAAGAACCTTTAAACATAGATTTCATAATTGAATAAAACTGATTTGGGAAATTGTGGTCTGACAAATTTCATCTTGCAAAAAGTGAATGGGTCAGAACAAGACCCCAATGCAAAGGCTGCTGTAATGAGAGCCCAGATATCAGTCTATCACCATAACAAAAATTCATTATGGTCAAATCTTCTGACTAAAATATAATAATTTATCTCAGAAGTAACTAGTGCTTAAATACCCACAAGCACTTTAGTCTGGGATTTCAGTATCCAGTTGCTGAAGTGTTGGACACATTGACAGCCTTGTTACCCGTATAATAGGTCATTGATGGACTCCTTCAATCTATAGATGACTGTGTCGTTTCATGCTTTATCTTGTACGTTCCCATTGATTACCATTTGTTTCTAGCTGCTTTTGTTGAACTTAATTTGTGCTTGATTTTTTTGCTCAAGAAAAAGGATATGCACAAGTAGAGTAAAACAAAAGCCAACCCCAACTAGCTTGAGATTTAGGCATAGTTATTGTTGTTGAGTGCAACATAAACAGCTAGAAAGAAATAGATAATTCACGTTGTATAACAGTATAACTCAGATATTATTACTTTATTAGTTCACATAATATAGGGCTGGCTGACACTAGGATATGCGCGCTCCTATCCCCTGAAAGTTTTACACTTTAGTTTACTATGCCATACATGTGCCTGCATGCTGAAAGTTAACAATTTGATTTTTGATGTCTCTGCTGTCCTATCAGGTTTTGGAATCGGTGCAGGAGTCTACAGTAGTGATCTGCAAACCAAGTTCAGAGACAATCTTTTCACCTAGTGTGGAGCCTGTTAGTGGTGCGCACAGTGAGTCTGATATACCAAGTGATGGAGGTATACCTCCATTTTTGTTGGATTCTTTTGTTGATTATGAAATTCATATTCAGATTTTGTTTCTTCTCTTTGTCCTGAAAAAGTGCTTAGGCAAACCACAACCCATCCTTAAATTTGCTGTATTTCTTCTGTTCTTGAAAAGGATGTTGCCACACAGCCAAAAGCCCCCCGGGTCGTAGATGATAAGAGCTGGGGAGCACACCTCTCTCTCTCTCTCTGTTCTAGTTCTCGTGAAAAAGATCATTATTACATAAACTTATCGTATTTTTGGTTGCTTACAGCAAACAATGATTTTTATGTACCCCAATTGGAGACTGAAGATAGTGATAGCAGCAGAAGTTCGTGTGAACATCAGACGTGCAATGTTTCAGATTTCTACATCTCTGATATGATTGTTTCTTGTTTGGCTGTTGAGGGTGAAACCATCTATGATAACAGTTTGACTGACAGGTTCTTGGCTGATTACAAGTGTGAAGAACCAAATATTTTT</genome_strand>
        <mrna_strand>AAAGCTAGCCACATCCAGTTCGAAAGAAAAAAATGGTCTCCATGTCTGTCCAAATTCTAGTGTCATATCCAAGAGTTCTCTCTCTCGAACCAGAAGTGTGCAGAATGCAGACGAAGTTGCAGATCTGATTCACAATACTCATGATG...........................................................................................................................................................................................TTCCTAGCTACTACAAAGTTCATCCACACCAAGTCGGAAGAAATGGTGATCATGCTAATGATTTGGTAGATGACCTTCTTGAAAAGCAACAGCCACCTGTTACTGATTCTGCAAACCTTGATACCACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGGAATCGGTGCAGGAGTCTACAGTAGTGATCTGCAAACCAAGTTCAGAGACAATCTTTTCACCTAGTGTGGAGCCTGTTAGTGGTGCGCACAGTGAGTCTGATATACCAAGTGATGGAG.........................................................................................................................................................................................................................................................................................CAAACAATGATTTTTATGTACCCCAATTGGAGACTGAAGATAGTGATAGCAGCAGAAGTTCGTGTGAACATCAGACGTGCAATGTTTCAGATTTCTACATCTCTGATATGATTGTTTCTTGTTTGGCTGTTGAGGGTGAAACCATCTATGATAACAGTTTGACTGACAGGTTCTTGGCTGATTACAAGTGTGAAGAACCAAATATTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E269845" ref_strand="+" ref_description="SGN-E269845 [cLEM-17-M8]">
      <seq>atccaagagttctctctctcgaaccataagtgtgcagagagctcacgaagttgcagatctgattcacaatactcatgatgttcctagctactacaaagttcatccacaccaagtcggaagaaatggtgatcatgctaatgatttggtagatgaccttcttgaaaagcaacagccacctgttactgattctgcaaaccttgataccacggttttggaatcggcgcaggagtctacagtagtgatctgcaaaccaagttcagagacaatctttttcacctattgtggagcctgttagtggtgcgcacagtgagtctggtataccaagtgatggagcacacaatgattttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="51000" stop="54108"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51300" g_stop="51379" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="80" r_length="80" r_score="0.938"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51380" i_stop="51566" i_length="187">
            <donor d_prob="0.999" d_score="0.92"/>
            <acceptor a_prob="0.923" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51567" g_stop="51694" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="208" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="51695" i_stop="53684" i_length="1990">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.933" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53685" g_stop="53808" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="333" r_length="125" r_score="0.960"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53809" i_stop="54089" i_length="281">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54090" g_stop="54105" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="349" r_length="16" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E269845" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>348</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E269845" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51300" e_stop="51379"/>
          <exon e_start="51567" e_stop="51694"/>
          <exon e_start="53685" e_stop="53808"/>
          <exon e_start="54090" e_stop="54105"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCAAGAGTTCTCTCTCTCGAACCAGAAGTGTGCAGAATGCAGACGAAGTTGCAGATCTGATTCACAATACTCATGATGGTAGGTTTTGTTCTATGTTATGGCTTTTCAGAATAAGAACTTTTTCGTTGTTATTGTGATGGTGTGAGATTGATGCTTTTCTCATCACCCACAAGTTTTACAATGTAACTCTCTGCTCTATGCTGACATTGCCATTTCTTTGTACTGCGCATTCTGGTTCAATCATCAGTTGCTTTAATTCTTGCAGTTCCTAGCTACTACAAAGTTCATCCACACCAAGTCGGAAGAAATGGTGATCATGCTAATGATTTGGTAGATGACCTTCTTGAAAAGCAACAGCCACCTGTTACTGATTCTGCAAACCTTGATACCACGGTAAATATGTCCTCGAGTGTTAACTATTAGTACCTGTTGCTTTACGTTTCATTTATAGTAGTCTTAATTTATTTATTCATTTCTTTCAACTATCTGGTGTATAATGGACTCAAATTCTTCCAAATATACACATATCTCTTGTCATGCATCTTCAGCTTGTTATATAATAAATTTATATAGTTCCCATTTTCCCGGTAAATGGTCATAAAGTGTTCTCATAAACATTATGGAGATACAGAAACTGAACATAGAAATTCATAGGAGAAACCATGGAACCAAAGAAAGGTCCACATTTAAGCTGTCTGATCTCTCCATATCTCTACTTCAGTGGTGTGTGAAGAAAACAGTATGTGAAAGGGCTGAGACACACGAGCATCAGGAAAAGTAGGCCATTTGTTTTTCTAGAGTCAAATTGAGCTTCATTTTGATTTTTGACATGAATTAAACCGAGCATCAGTACGAGAGTCAAATTGAGTAATCTTCATTTTGATATTTGACATGAATTAATCTGTTTTCTGAAATAAAATATATATGTAATATTTTTGGAAATGTCTAGTGTTATAGATGTTCAAAATCAGCACTAGAAGGTGCCACAATTACATAAAAAGTCGGAAAAAATGAAAAAAAAAAAAGATAAAAAAGAAAAAATGAAACTTGCTGGCTATCTGTACAAAAGATTTGATGAACTGTAACTGGGTTACACTATCATCTATCCATTTCTGTTTACACCAAAAAGATATCCACAAAATGCAATCTGACTTGATCTTCAAGACTGAGTTCTTTTGTCTTTATAAACATCTTTGTTTCTCTCTTTCCAAGCACACCACCATATGACTTCTGGTACTGTGTTCCATTCTGTCTTGATCTGCTTTGAAAGACCTTTCCTATGCTGAGATAGTACCTAGCATTACCCATTTGATTCCCAGAAATTTCAAGAGAAACTGCAACAACTGTGTGCTGATAGCAATGTAGAAATAAATGGTCAACAGACTCTTCTCTTTCTTCAGACATCTGTAAACTATTGAACTCCCCTTCTTTGAAGATTGTCTTGGGTTAAGCAAGTCTTCCTAGCCACCAACCATACAAAACATTTCGTTTCCATTGGTGCTATAGAGTTCCAAACTTGTTTCCAGAAACCAAAATGTTGCTAATAGGACTCCCTCGTGAGCAAAATTATTACATGCCCTTACAGTAAAGATGTCCTTGCTGTGTTCCTTTACAGGTAATATATTTTAACCAAATACATAAGAACCTTTAAACATAGATTTCATAATTGAATAAAACTGATTTGGGAAATTGTGGTCTGACAAATTTCATCTTGCAAAAAGTGAATGGGTCAGAACAAGACCCCAATGCAAAGGCTGCTGTAATGAGAGCCCAGATATCAGTCTATCACCATAACAAAAATTCATTATGGTCAAATCTTCTGACTAAAATATAATAATTTATCTCAGAAGTAACTAGTGCTTAAATACCCACAAGCACTTTAGTCTGGGATTTCAGTATCCAGTTGCTGAAGTGTTGGACACATTGACAGCCTTGTTACCCGTATAATAGGTCATTGATGGACTCCTTCAATCTATAGATGACTGTGTCGTTTCATGCTTTATCTTGTACGTTCCCATTGATTACCATTTGTTTCTAGCTGCTTTTGTTGAACTTAATTTGTGCTTGATTTTTTTGCTCAAGAAAAAGGATATGCACAAGTAGAGTAAAACAAAAGCCAACCCCAACTAGCTTGAGATTTAGGCATAGTTATTGTTGTTGAGTGCAACATAAACAGCTAGAAAGAAATAGATAATTCACGTTGTATAACAGTATAACTCAGATATTATTACTTTATTAGTTCACATAATATAGGGCTGGCTGACACTAGGATATGCGCGCTCCTATCCCCTGAAAGTTTTACACTTTAGTTTACTATGCCATACATGTGCCTGCATGCTGAAAGTTAACAATTTGATTTTTGATGTCTCTGCTGTCCTATCAGGTTTTGGAATCGGTGCAGGAGTCTACAGTAGTGATCTGCAAACCAAGTTCAGAGACAATCT-TTTCACCTAGTGTGGAGCCTGTTAGTGGTGCGCACAGTGAGTCTGATATACCAAGTGATGGAGGTATACCTCCATTTTTGTTGGATTCTTTTGTTGATTATGAAATTCATATTCAGATTTTGTTTCTTCTCTTTGTCCTGAAAAAGTGCTTAGGCAAACCACAACCCATCCTTAAATTTGCTGTATTTCTTCTGTTCTTGAAAAGGATGTTGCCACACAGCCAAAAGCCCCCCGGGTCGTAGATGATAAGAGCTGGGGAGCACACCTCTCTCTCTCTCTCTGTTCTAGTTCTCGTGAAAAAGATCATTATTACATAAACTTATCGTATTTTTGGTTGCTTACAGCAAACAATGATTTTTA</genome_strand>
        <mrna_strand>ATCCAAGAGTTCTCTCTCTCGAACCATAAGTGTGCAGAGAGCTCACGAAGTTGCAGATCTGATTCACAATACTCATGATG...........................................................................................................................................................................................TTCCTAGCTACTACAAAGTTCATCCACACCAAGTCGGAAGAAATGGTGATCATGCTAATGATTTGGTAGATGACCTTCTTGAAAAGCAACAGCCACCTGTTACTGATTCTGCAAACCTTGATACCACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGGAATCGGCGCAGGAGTCTACAGTAGTGATCTGCAAACCAAGTTCAGAGACAATCTTTTTCACCTATTGTGGAGCCTGTTAGTGGTGCGCACAGTGAGTCTGGTATACCAAGTGATGGAG.........................................................................................................................................................................................................................................................................................CACACAATGATTTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E247729" ref_strand="+" ref_description="SGN-E247729 [cLEF-42-O16]">
      <seq>ctgcaaatcttgataccacggttttggagtcggtgcaggagtctacagtagtgatctgcaaaccaagttcagagacaatcttttcacctagtgtggagcctgttagtgcaaacaatgatttttatgtaccccaattggagactgaagatagtgatagcagcagaagttcgtgtgaacatcagacgtgcaatgtttcagatttctacatctctgatatgattgtgtcttgtttggctgttgagggtgaaaccatctatgataacagtttgactgacaggttcttggctgattacaagtgtgaagaaccaaatatttttaataatgttgatgaggaatacttgctgttgcctttacttgaagacactgcagcagctagctataggcaagtgtgcagaacgtctactgaagaaactgctgttcagtctgatgattcgagcttatacatggcaattcaccagcttagatcatctgaacaatctgatgctttcacatatttagaatctgatcaagcagaatgctttgacccacatatatttataagaaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="53373" stop="54827"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53685" g_stop="53772" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="108" r_length="88" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53773" i_stop="54089" i_length="317">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54090" g_stop="54527" g_length="438"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="546" r_length="438" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E247729" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E247729" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53685" e_stop="53772"/>
          <exon e_start="54090" e_stop="54527"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTGGAATCGGTGCAGGAGTCTACAGTAGTGATCTGCAAACCAAGTTCAGAGACAATCTTTTCACCTAGTGTGGAGCCTGTTAGTGGTGCGCACAGTGAGTCTGATATACCAAGTGATGGAGGTATACCTCCATTTTTGTTGGATTCTTTTGTTGATTATGAAATTCATATTCAGATTTTGTTTCTTCTCTTTGTCCTGAAAAAGTGCTTAGGCAAACCACAACCCATCCTTAAATTTGCTGTATTTCTTCTGTTCTTGAAAAGGATGTTGCCACACAGCCAAAAGCCCCCCGGGTCGTAGATGATAAGAGCTGGGGAGCACACCTCTCTCTCTCTCTCTGTTCTAGTTCTCGTGAAAAAGATCATTATTACATAAACTTATCGTATTTTTGGTTGCTTACAGCAAACAATGATTTTTATGTACCCCAATTGGAGACTGAAGATAGTGATAGCAGCAGAAGTTCGTGTGAACATCAGACGTGCAATGTTTCAGATTTCTACATCTCTGATATGATTGTTTCTTGTTTGGCTGTTGAGGGTGAAACCATCTATGATAACAGTTTGACTGACAGGTTCTTGGCTGATTACAAGTGTGAAGAACCAAATATTTTTAATAATGTTGATGAGGAATACTTGCTGTTGCCTTTCCTTGAAGACACTGCAGCAGCTAGCTATAGTCAAGTGTGCAGAACGTCTAGTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATT</genome_strand>
        <mrna_strand>GTTTTGGAGTCGGTGCAGGAGTCTACAGTAGTGATCTGCAAACCAAGTTCAGAGACAATCTTTTCACCTAGTGTGGAGCCTGTTAGTG.............................................................................................................................................................................................................................................................................................................................CAAACAATGATTTTTATGTACCCCAATTGGAGACTGAAGATAGTGATAGCAGCAGAAGTTCGTGTGAACATCAGACGTGCAATGTTTCAGATTTCTACATCTCTGATATGATTGTGTCTTGTTTGGCTGTTGAGGGTGAAACCATCTATGATAACAGTTTGACTGACAGGTTCTTGGCTGATTACAAGTGTGAAGAACCAAATATTTTTAATAATGTTGATGAGGAATACTTGCTGTTGCCTTTACTTGAAGACACTGCAGCAGCTAGCTATAGGCAAGTGTGCAGAACGTCTACTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTTATAAGAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E252135" ref_strand="+" ref_description="SGN-E252135 [cLEG-8-G8]">
      <seq>cgggctgcaggttcctgtgaacatcagacgtgcaatgtttcagatttctacatctctgatatgattgggtcttgtttggctgttgagggtgaaaccatctatgataacagtttgactgacaggttcttggctgattacaagtgtgaagaaccaaatatttttaataatgttgatgaggaatacttgctgttgcctttccttgaagacactgcagcagctagctatagtcaagtgtgcagaacgtctagtgaagaaactgctgttcagtctgatgattcgagcttatacatggcaattcaccagcttagatcatctgaacaatctgatgctttcacatatttagaatctgatcaagcagaatgctttgacccacatatattcataagaaatttgccagacatattagagaggccaagtattttgccaaacgaatcagaaacatgcaaaccgatcaccctagtacttgacctagatgaaacacttgttcattctacactggagcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="53841" stop="55195"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54135" g_stop="54611" g_length="477"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="475" r_length="475" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54612" i_stop="54866" i_length="255">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54867" g_stop="54895" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="504" r_length="29" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E252135" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>506</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E252135" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54135" e_stop="54611"/>
          <exon e_start="54867" e_stop="54895"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAGCAGCAGAAGTTCGTGTGAACATCAGACGTGCAATGTTTCAGATTTCTACATCTCTGATATGATTGTTTCTTGTTTGGCTGTTGAGGGTGAAACCATCTATGATAACAGTTTGACTGACAGGTTCTTGGCTGATTACAAGTGTGAAGAACCAAATATTTTTAATAATGTTGATGAGGAATACTTGCTGTTGCCTTTCCTTGAAGACACTGCAGCAGCTAGCTATAGTCAAGTGTGCAGAACGTCTAGTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATTTGCCAGACATATTAGAGAGGCCAAGTATTTTGCCAAACGAATCAGAAACATGCAAACCGATCACCCTAGTACTTGACCTAGATGGTGAGATTCACTACTTTGGTGCTCCAAGTTTACTACTCATTATAGTCTTGCTGCAATTTTTTGTTACTCTGGAAATGATGCAATGTGTAGCTTATTTTAAAAGCAATCTTTTGCTATACCTGAGAGCTAGTTACTAAGATTCCTTTACAGCAGGGAGAGTACCCTGGTACCTTCTTGTATAATACATATATTTTACAGCATGACATGGTTCCCATAGATTGTCTAATATTTTGCGTGTTCATTTCATGTCTTCAGAAACACTTGTTCATTCTACACTGGAGCAC</genome_strand>
        <mrna_strand>CGGGCTGCAG--GTTCCTGTGAACATCAGACGTGCAATGTTTCAGATTTCTACATCTCTGATATGATTGGGTCTTGTTTGGCTGTTGAGGGTGAAACCATCTATGATAACAGTTTGACTGACAGGTTCTTGGCTGATTACAAGTGTGAAGAACCAAATATTTTTAATAATGTTGATGAGGAATACTTGCTGTTGCCTTTCCTTGAAGACACTGCAGCAGCTAGCTATAGTCAAGTGTGCAGAACGTCTAGTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATTTGCCAGACATATTAGAGAGGCCAAGTATTTTGCCAAACGAATCAGAAACATGCAAACCGATCACCCTAGTACTTGACCTAGATG...............................................................................................................................................................................................................................................................AAACACTTGTTCATTCTACACTGGAGCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E260093" ref_strand="+" ref_description="SGN-E260093 [cLEG-52-H18]">
      <seq>tcgtgtgaacatcagacgtgcaatgtttcagatttctacatctctgatatgattgtttcttgtttggctgttgagggtgaaaccatctatgataacagtttgactgacaggttcttggctgattacaagtgtgaagaaccaaatatttttaataatgttgatgaggaatacttgctgttgcctttccttgaagacactgcagcagctagctatagtcaagtgtgcagaacgtctagtgaagaaactgctgttcagtctgatgattcgagcttatacatggcaattcaccagcttagatcatctgaacaatctgatgctttcacatatttagaatctgatcaagcagaatgctttgacccacatatattcataagaaatttgccagacatattagagaggccaagtattttgccaaacgaatcagaaacatgcaaaccgatcaccctagtacttgacctagatgaaacacttgttcattctacactggagcactgtgacgatgcagacttcacatttcctgttttcttcagcatgaaagaacacattgtctatgtgaaacagcggcctcacctccggacattcttggagagagttgcagagatgtttgacattgtaatttttactgctagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="53849" stop="55333"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54149" g_stop="54611" g_length="463"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="463" r_length="463" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54612" i_stop="54866" i_length="255">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54867" g_stop="55033" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="630" r_length="167" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E260093" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>630</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E260093" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54149" e_stop="54611"/>
          <exon e_start="54867" e_stop="55033"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGTGTGAACATCAGACGTGCAATGTTTCAGATTTCTACATCTCTGATATGATTGTTTCTTGTTTGGCTGTTGAGGGTGAAACCATCTATGATAACAGTTTGACTGACAGGTTCTTGGCTGATTACAAGTGTGAAGAACCAAATATTTTTAATAATGTTGATGAGGAATACTTGCTGTTGCCTTTCCTTGAAGACACTGCAGCAGCTAGCTATAGTCAAGTGTGCAGAACGTCTAGTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATTTGCCAGACATATTAGAGAGGCCAAGTATTTTGCCAAACGAATCAGAAACATGCAAACCGATCACCCTAGTACTTGACCTAGATGGTGAGATTCACTACTTTGGTGCTCCAAGTTTACTACTCATTATAGTCTTGCTGCAATTTTTTGTTACTCTGGAAATGATGCAATGTGTAGCTTATTTTAAAAGCAATCTTTTGCTATACCTGAGAGCTAGTTACTAAGATTCCTTTACAGCAGGGAGAGTACCCTGGTACCTTCTTGTATAATACATATATTTTACAGCATGACATGGTTCCCATAGATTGTCTAATATTTTGCGTGTTCATTTCATGTCTTCAGAAACACTTGTTCATTCTACACTGGAGCACTGTGACGATGCAGACTTCACATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCAGACATTCTTGGAGAGAGTTGCAGAGATGTTTGACATTGTAATTTTTACTGCTAGT</genome_strand>
        <mrna_strand>TCGTGTGAACATCAGACGTGCAATGTTTCAGATTTCTACATCTCTGATATGATTGTTTCTTGTTTGGCTGTTGAGGGTGAAACCATCTATGATAACAGTTTGACTGACAGGTTCTTGGCTGATTACAAGTGTGAAGAACCAAATATTTTTAATAATGTTGATGAGGAATACTTGCTGTTGCCTTTCCTTGAAGACACTGCAGCAGCTAGCTATAGTCAAGTGTGCAGAACGTCTAGTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATTTGCCAGACATATTAGAGAGGCCAAGTATTTTGCCAAACGAATCAGAAACATGCAAACCGATCACCCTAGTACTTGACCTAGATG...............................................................................................................................................................................................................................................................AAACACTTGTTCATTCTACACTGGAGCACTGTGACGATGCAGACTTCACATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCGGACATTCTTGGAGAGAGTTGCAGAGATGTTTGACATTGTAATTTTTACTGCTAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E261131" ref_strand="+" ref_description="SGN-E261131 [cLEG-65-H7]">
      <seq>tcgtgtgaacatcagacgtgcaatgtttcagatttctacatctctgatatgattgtttcttgtttggctgttgagggtgaaaccatctatgataacagtttgactgacaggttcttggctgattacaagtgtgaagaaccaaatatttttaataatgttgatgaggaatacttgctgttgcctttccttgaagacactgcagcagctagctatagtcaagtgtgcagaacgtctagtgaagaaactgctgttcagtctgatgattcgagcttatacatggcaattcaccagcttagatcatctgaacaatctgatgctttcacatatttagaatctgatcaagcagaatgctttgacccacatatattcataagaaatttgccagacatattagaagaggccaagtattttgccaaacgaatcagaaacatgcaaaccgatcaccctagtacttgacctagatgaaacacttgttcattctacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="53849" stop="55187"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54149" g_stop="54611" g_length="463"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="464" r_length="464" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54612" i_stop="54866" i_length="255">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54867" g_stop="54887" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="485" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E261131" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E261131" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54149" e_stop="54611"/>
          <exon e_start="54867" e_stop="54887"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGTGTGAACATCAGACGTGCAATGTTTCAGATTTCTACATCTCTGATATGATTGTTTCTTGTTTGGCTGTTGAGGGTGAAACCATCTATGATAACAGTTTGACTGACAGGTTCTTGGCTGATTACAAGTGTGAAGAACCAAATATTTTTAATAATGTTGATGAGGAATACTTGCTGTTGCCTTTCCTTGAAGACACTGCAGCAGCTAGCTATAGTCAAGTGTGCAGAACGTCTAGTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATTTGCCAGACATATTAG-AGAGGCCAAGTATTTTGCCAAACGAATCAGAAACATGCAAACCGATCACCCTAGTACTTGACCTAGATGGTGAGATTCACTACTTTGGTGCTCCAAGTTTACTACTCATTATAGTCTTGCTGCAATTTTTTGTTACTCTGGAAATGATGCAATGTGTAGCTTATTTTAAAAGCAATCTTTTGCTATACCTGAGAGCTAGTTACTAAGATTCCTTTACAGCAGGGAGAGTACCCTGGTACCTTCTTGTATAATACATATATTTTACAGCATGACATGGTTCCCATAGATTGTCTAATATTTTGCGTGTTCATTTCATGTCTTCAGAAACACTTGTTCATTCTACAC</genome_strand>
        <mrna_strand>TCGTGTGAACATCAGACGTGCAATGTTTCAGATTTCTACATCTCTGATATGATTGTTTCTTGTTTGGCTGTTGAGGGTGAAACCATCTATGATAACAGTTTGACTGACAGGTTCTTGGCTGATTACAAGTGTGAAGAACCAAATATTTTTAATAATGTTGATGAGGAATACTTGCTGTTGCCTTTCCTTGAAGACACTGCAGCAGCTAGCTATAGTCAAGTGTGCAGAACGTCTAGTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATTTGCCAGACATATTAGAAGAGGCCAAGTATTTTGCCAAACGAATCAGAAACATGCAAACCGATCACCCTAGTACTTGACCTAGATG...............................................................................................................................................................................................................................................................AAACACTTGTTCATTCTACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E370941" ref_strand="+" ref_description="SGN-E370941 [TUS-27-L19]">
      <seq>atatttttaataatgttgatgaggaatacttgctgttgcctttccttgaagacactgcagcagctagctatagtcaagtgtgcagaacgtctagtgaagaaactgctgttcagtctgatgattcgagcttatacatggcaattcaccagcttagatcatctgaacaatctgatgctttcacatatttagaatctgatcaagcagaatgctttgacccacatatattcataagaaatttgccagacatattagagaggccaagtattttgccaaacgaatcagaaacatgcaaaccgatcaccctagtacttgacctagatgaaacacttgttcattctacactggagcactgtgacgatgcagacttcacatttcctgttttcttcagcatgaaagaacacattgtctatgtgaaacagcggcctcacctccggacattcttggagagagttgcagagatgtttgacattgtaatttttactgctagtcagagcatatatgcgaagcaattgttggatattctggatccagatggaaagattatctcaaggcgagcatatcgtgaatcatgcatcttctctgatggaagttatacaaaggatttaacggtattaggtgttgatctggcaaaagttgtcattgtagataattccccacaggttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="53991" stop="55506"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54291" g_stop="54611" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="321" r_length="321" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54612" i_stop="54866" i_length="255">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54867" g_stop="55204" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="659" r_length="338" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E370941" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E370941" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54291" e_stop="54611"/>
          <exon e_start="54867" e_stop="55204"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATTTTTAATAATGTTGATGAGGAATACTTGCTGTTGCCTTTCCTTGAAGACACTGCAGCAGCTAGCTATAGTCAAGTGTGCAGAACGTCTAGTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATTTGCCAGACATATTAGAGAGGCCAAGTATTTTGCCAAACGAATCAGAAACATGCAAACCGATCACCCTAGTACTTGACCTAGATGGTGAGATTCACTACTTTGGTGCTCCAAGTTTACTACTCATTATAGTCTTGCTGCAATTTTTTGTTACTCTGGAAATGATGCAATGTGTAGCTTATTTTAAAAGCAATCTTTTGCTATACCTGAGAGCTAGTTACTAAGATTCCTTTACAGCAGGGAGAGTACCCTGGTACCTTCTTGTATAATACATATATTTTACAGCATGACATGGTTCCCATAGATTGTCTAATATTTTGCGTGTTCATTTCATGTCTTCAGAAACACTTGTTCATTCTACACTGGAGCACTGTGACGATGCAGACTTCACATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCAGACATTCTTGGAGAGAGTTGCAGAGATGTTTGACATTGTAATTTTTACTGCTAGTCAGAGCATATATGCGAAGCAATTGTTGGATATTCTGGATCCAGATGGAAAGATTATCTCAAGGCGAGCATATCGTGAATCATGCATCTTCTCTGATGGAAGTTATACAAAGGATTTAACGGTATTAGGTGTTGATCTGGCAAAAGTTGTCATTGTAGATAATTCCCCACAG</genome_strand>
        <mrna_strand>ATATTTTTAATAATGTTGATGAGGAATACTTGCTGTTGCCTTTCCTTGAAGACACTGCAGCAGCTAGCTATAGTCAAGTGTGCAGAACGTCTAGTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATTTGCCAGACATATTAGAGAGGCCAAGTATTTTGCCAAACGAATCAGAAACATGCAAACCGATCACCCTAGTACTTGACCTAGATG...............................................................................................................................................................................................................................................................AAACACTTGTTCATTCTACACTGGAGCACTGTGACGATGCAGACTTCACATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCGGACATTCTTGGAGAGAGTTGCAGAGATGTTTGACATTGTAATTTTTACTGCTAGTCAGAGCATATATGCGAAGCAATTGTTGGATATTCTGGATCCAGATGGAAAGATTATCTCAAGGCGAGCATATCGTGAATCATGCATCTTCTCTGATGGAAGTTATACAAAGGATTTAACGGTATTAGGTGTTGATCTGGCAAAAGTTGTCATTGTAGATAATTCCCCACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E271471" ref_strand="+" ref_description="SGN-E271471 [cLEM-5-H2]">
      <seq>tttttaataatgttgatgaggaatactggcgggtgcctttccttgaagacactgcagcagctagctatagtcaagtgtgcagaacgtctagtgaagaaactgctgttcagtctgatgattcgagcttatacatggcaattcaccagcttagatcatctgaacaatctgatgctttcacatatttagaatctgatcaagcagaatgctttgacccacatatattcataagaaatttgccagacatattagagaggccaagtattttgccaaacgaatcagaaacatgcaaaccgatcaccctagtacttgacctagatgaaacacttgttcattctacactggagcactgtgacgatgcagacttctcatttcctgttttcttcagcatgaaagaacacattgtctatgtgaaacagcggcctcacctccggacattcttggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="53994" stop="55291"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54294" g_stop="54611" g_length="318"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="318" r_length="318" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54612" i_stop="54866" i_length="255">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54867" g_stop="54991" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="443" r_length="125" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E271471" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>443</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E271471" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54294" e_stop="54611"/>
          <exon e_start="54867" e_stop="54991"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTAATAATGTTGATGAGGAATACTTGCTGTTGCCTTTCCTTGAAGACACTGCAGCAGCTAGCTATAGTCAAGTGTGCAGAACGTCTAGTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATTTGCCAGACATATTAGAGAGGCCAAGTATTTTGCCAAACGAATCAGAAACATGCAAACCGATCACCCTAGTACTTGACCTAGATGGTGAGATTCACTACTTTGGTGCTCCAAGTTTACTACTCATTATAGTCTTGCTGCAATTTTTTGTTACTCTGGAAATGATGCAATGTGTAGCTTATTTTAAAAGCAATCTTTTGCTATACCTGAGAGCTAGTTACTAAGATTCCTTTACAGCAGGGAGAGTACCCTGGTACCTTCTTGTATAATACATATATTTTACAGCATGACATGGTTCCCATAGATTGTCTAATATTTTGCGTGTTCATTTCATGTCTTCAGAAACACTTGTTCATTCTACACTGGAGCACTGTGACGATGCAGACTTCACATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCAGACATTCTTGGAG</genome_strand>
        <mrna_strand>TTTTTAATAATGTTGATGAGGAATACTGGCGGGTGCCTTTCCTTGAAGACACTGCAGCAGCTAGCTATAGTCAAGTGTGCAGAACGTCTAGTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATTTGCCAGACATATTAGAGAGGCCAAGTATTTTGCCAAACGAATCAGAAACATGCAAACCGATCACCCTAGTACTTGACCTAGATG...............................................................................................................................................................................................................................................................AAACACTTGTTCATTCTACACTGGAGCACTGTGACGATGCAGACTTCTCATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCGGACATTCTTGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E690262" ref_strand="+" ref_description="SGN-E690262 [LH_Ea03A20]">
      <seq>tgacactgcagcagctagctatagtcaagagtgcagaacgtctagtgaagaaactgctgttcagtcggatgattcgagcttatacatggcaattcaccagcttagatcatctgaacaatctgatgctttcacatatttagaatctgatcaagcagaatgctttgacccacatattttcataagaaatttgccagacatattagagaggccaaatattttgccaaacgaatcagaaacatgcaaaccgatcaccctagtacttgacctagatgaaacacttgttcattctacactggagcactgtgacgatgcagacttcacatttcctgttttcttcagcatgaaagaacacattgtctatgtgaaacagcggcctcacctccggacattcttggagagagttgcagagatgtttgacattgtaatttttactgctagtcagagcatatatgcgaagcaactgttggatattctggatccagatggaaagattatctcaaggcgagcatatcgtgaatcatgcatcttctctgatggaagttatacaaaggatttaacggtattaggtgttgatctggcaaaagttgtaatcgtagataattccccacaggttttcagattgcaagtgaataatgggattcctattaagagttggtttgatgatccttcagactctgcactaatttctttacttccattcctagagacactggctgatgctgatgatgtccgacctattattgctaagaaattcggtaacaaggaataagaggcccttgtttcttcctagtagttcctctaacacctcctctcttctcatttaaacaaatttatccttcatttacatgctcattggtctatcctcattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="54041" stop="56439"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54340" g_stop="54611" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="272" r_length="272" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54612" i_stop="54866" i_length="255">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54867" g_stop="55204" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="610" r_length="338" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="55205" i_stop="55880" i_length="676">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55881" g_stop="56139" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="611" r_stop="869" r_length="259" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E690262" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>869</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E690262" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54340" e_stop="54611"/>
          <exon e_start="54867" e_stop="55204"/>
          <exon e_start="55881" e_stop="56139"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACACTGCAGCAGCTAGCTATAGTCAAGTGTGCAGAACGTCTAGTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATTTGCCAGACATATTAGAGAGGCCAAGTATTTTGCCAAACGAATCAGAAACATGCAAACCGATCACCCTAGTACTTGACCTAGATGGTGAGATTCACTACTTTGGTGCTCCAAGTTTACTACTCATTATAGTCTTGCTGCAATTTTTTGTTACTCTGGAAATGATGCAATGTGTAGCTTATTTTAAAAGCAATCTTTTGCTATACCTGAGAGCTAGTTACTAAGATTCCTTTACAGCAGGGAGAGTACCCTGGTACCTTCTTGTATAATACATATATTTTACAGCATGACATGGTTCCCATAGATTGTCTAATATTTTGCGTGTTCATTTCATGTCTTCAGAAACACTTGTTCATTCTACACTGGAGCACTGTGACGATGCAGACTTCACATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCAGACATTCTTGGAGAGAGTTGCAGAGATGTTTGACATTGTAATTTTTACTGCTAGTCAGAGCATATATGCGAAGCAATTGTTGGATATTCTGGATCCAGATGGAAAGATTATCTCAAGGCGAGCATATCGTGAATCATGCATCTTCTCTGATGGAAGTTATACAAAGGATTTAACGGTATTAGGTGTTGATCTGGCAAAAGTTGTCATTGTAGATAATTCCCCACAGGTAATCTACTTGCATCTTGTTTTTGATGATAAACCTGTTATTACATACCTAAATCTGTTAGTTTGGAATGTGTTAAGTCATGTTAATATGTTTGCTTAGGTCCTATGCTTTGTTCGAGTATTTTAGCCCTGTTAGATAATCTTATGCCACGAGATAACTAGAGAATGTCTTGTACTTGTCATTCTTTTTTGGGGGTATAATGTGGATTGAGAAGATTATAAATGGAGAAACATGGTCTATAAAAATCTACAGCCAACCACAATTTTGAAACTGAGGTGGTTGTAGTAGTAGTTCCTGTATATGCTTATTGGTAGATTCCTCCCCCCTCCCACTCCTCCTCTTTTTTTTTTTTGGGTTATGGATGGTAAGGGGAGTGTACTGGTGAAATCAAGTCGCTAAAATTCATGTGCAATCTGTAAAATAGACACACCACCTTCATCAGGCCATTTCACCGCACTACTCTAGTCGTCTGTAGGCAGAGTTCACAATTGATTGTAAAAGAATATGGTCTCTTGATGGTTGTGAGTTTTTTTCAAGATTCATGTGCTTAGTTGGAAATTGGAGAAAACTAAAAGAGACATGAACAGCAACTTACCAAATGCAGAGTGCTTATTTGCTCATGAAGTAAGGCTATTGTTTTATGTAACTGAATATTAATTTTCCATCTTGTTTTCAGGTTTTCAGATTGCAAGTGAATAATGGGATTCCTATTAAGAGTTGGTTTGATGATCCTTCAGACTCTGCACTAATTTCTTTACTTCCATTCCTAGAGACACTGGCTGATGCTGATGATGTCCGACCTATTATTGCTAAGAAATTCGGTAACAAGGAATAAGAGGCCCTTGTTTCTTCCTAGTAGTTCCTCTAACACCTCCTCTCTTCTCATTTAAACAAATTTATCCTTCATTTACATGCTCATTGTTCTATCCTCATTG</genome_strand>
        <mrna_strand>TGACACTGCAGCAGCTAGCTATAGTCAAGAGTGCAGAACGTCTAGTGAAGAAACTGCTGTTCAGTCGGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATTTTCATAAGAAATTTGCCAGACATATTAGAGAGGCCAAATATTTTGCCAAACGAATCAGAAACATGCAAACCGATCACCCTAGTACTTGACCTAGATG...............................................................................................................................................................................................................................................................AAACACTTGTTCATTCTACACTGGAGCACTGTGACGATGCAGACTTCACATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCGGACATTCTTGGAGAGAGTTGCAGAGATGTTTGACATTGTAATTTTTACTGCTAGTCAGAGCATATATGCGAAGCAACTGTTGGATATTCTGGATCCAGATGGAAAGATTATCTCAAGGCGAGCATATCGTGAATCATGCATCTTCTCTGATGGAAGTTATACAAAGGATTTAACGGTATTAGGTGTTGATCTGGCAAAAGTTGTAATCGTAGATAATTCCCCACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTCAGATTGCAAGTGAATAATGGGATTCCTATTAAGAGTTGGTTTGATGATCCTTCAGACTCTGCACTAATTTCTTTACTTCCATTCCTAGAGACACTGGCTGATGCTGATGATGTCCGACCTATTATTGCTAAGAAATTCGGTAACAAGGAATAAGAGGCCCTTGTTTCTTCCTAGTAGTTCCTCTAACACCTCCTCTCTTCTCATTTAAACAAATTTATCCTTCATTTACATGCTCATTGGTCTATCCTCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E239821" ref_strand="+" ref_description="SGN-E239821 [cLED-29-B19]">
      <seq>tagctatagtcaagtgtgcagaacgtctagtgaagaaactgctgttcagtctgatgattcgagcttatacatggcaattcaccagcttagatcatctgaacaatctgatgctttcacatatttagaatctgatcaagcagaatgctttgacccacatatattcataagaaatttgccagacatattagagaggccaagtattttgccaaacgaatcagaaacatgcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="54055" stop="54882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54355" g_stop="54582" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="228" r_length="228" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E239821" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>228</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E239821" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54355" e_stop="54582"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCTATAGTCAAGTGTGCAGAACGTCTAGTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATTTGCCAGACATATTAGAGAGGCCAAGTATTTTGCCAAACGAATCAGAAACATGCAA</genome_strand>
        <mrna_strand>TAGCTATAGTCAAGTGTGCAGAACGTCTAGTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATTTGCCAGACATATTAGAGAGGCCAAGTATTTTGCCAAACGAATCAGAAACATGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E206641" ref_strand="+" ref_description="SGN-E206641 [cLEC-31-N23]">
      <seq>tgattcgagcttatacatggcaattcaccagcttagatcatctgaacaatctgatgctttcacatatttagaatctgatcaagcagaatgctttgacccacatatattcataagaaatttgccagacatattagagaggccaagtattttgccaaacgaatcagaaacatgcaaaccgatcaccctagtacttgacctagatgaaacacttgttcattctacactggagcactgtgacgatgcagacttcacatttcctgttttcttcagcatgaaagaacacattgtctatgtgaaacagcggcctcacctccggacattcttggagagagttgcagagatgtttgacattgtaatttttactgctagtcagagcatatatgcgaagcaattgttggatattctggatccagatggaaagattatctcaaggcgagcatatcgtgaatcatgcatcttctctgatggaagttatacaaaggatttaacggtatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="54109" stop="55459"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54409" g_stop="54611" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="203" r_length="203" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54612" i_stop="54866" i_length="255">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54867" g_stop="55159" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="204" r_stop="496" r_length="293" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E206641" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E206641" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54409" e_stop="54611"/>
          <exon e_start="54867" e_stop="55159"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATTTGCCAGACATATTAGAGAGGCCAAGTATTTTGCCAAACGAATCAGAAACATGCAAACCGATCACCCTAGTACTTGACCTAGATGGTGAGATTCACTACTTTGGTGCTCCAAGTTTACTACTCATTATAGTCTTGCTGCAATTTTTTGTTACTCTGGAAATGATGCAATGTGTAGCTTATTTTAAAAGCAATCTTTTGCTATACCTGAGAGCTAGTTACTAAGATTCCTTTACAGCAGGGAGAGTACCCTGGTACCTTCTTGTATAATACATATATTTTACAGCATGACATGGTTCCCATAGATTGTCTAATATTTTGCGTGTTCATTTCATGTCTTCAGAAACACTTGTTCATTCTACACTGGAGCACTGTGACGATGCAGACTTCACATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCAGACATTCTTGGAGAGAGTTGCAGAGATGTTTGACATTGTAATTTTTACTGCTAGTCAGAGCATATATGCGAAGCAATTGTTGGATATTCTGGATCCAGATGGAAAGATTATCTCAAGGCGAGCATATCGTGAATCATGCATCTTCTCTGATGGAAGTTATACAAAGGATTTAACGGTATTA</genome_strand>
        <mrna_strand>TGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATTTGCCAGACATATTAGAGAGGCCAAGTATTTTGCCAAACGAATCAGAAACATGCAAACCGATCACCCTAGTACTTGACCTAGATG...............................................................................................................................................................................................................................................................AAACACTTGTTCATTCTACACTGGAGCACTGTGACGATGCAGACTTCACATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCGGACATTCTTGGAGAGAGTTGCAGAGATGTTTGACATTGTAATTTTTACTGCTAGTCAGAGCATATATGCGAAGCAATTGTTGGATATTCTGGATCCAGATGGAAAGATTATCTCAAGGCGAGCATATCGTGAATCATGCATCTTCTCTGATGGAAGTTATACAAAGGATTTAACGGTATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E328261" ref_strand="+" ref_description="SGN-E328261 [cTOC-21-N3]">
      <seq>ttagatcatctgaacaatctgatgctttcacatatttagaatctgatcaagcagaatgctttgacccacatatattcataagaaatttgccagacatattagagaggccaagtattttgccaaacgaatcagaaacatgcaaaccgatcaccctagtacttgacctagatgaaacacttgttcattctacactggagcactgtgacgatgcagacttcacatttcctgttttcttcagcatgaaagaacacattgtctatgtgaaacagcggcctcacctccggacattcttggagagagttgcagagatgtttgacattgtaatttttactgctagtcagagcatatatgcgaagcaattgttggatattctggatccagatggaaagattatctcaaggcgagcatatcgtgaatcatgcatcttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="54141" stop="55424"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54441" g_stop="54611" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54612" i_stop="54866" i_length="255">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54867" g_stop="55124" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="429" r_length="258" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E328261" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E328261" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54441" e_stop="54611"/>
          <exon e_start="54867" e_stop="55124"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATTTGCCAGACATATTAGAGAGGCCAAGTATTTTGCCAAACGAATCAGAAACATGCAAACCGATCACCCTAGTACTTGACCTAGATGGTGAGATTCACTACTTTGGTGCTCCAAGTTTACTACTCATTATAGTCTTGCTGCAATTTTTTGTTACTCTGGAAATGATGCAATGTGTAGCTTATTTTAAAAGCAATCTTTTGCTATACCTGAGAGCTAGTTACTAAGATTCCTTTACAGCAGGGAGAGTACCCTGGTACCTTCTTGTATAATACATATATTTTACAGCATGACATGGTTCCCATAGATTGTCTAATATTTTGCGTGTTCATTTCATGTCTTCAGAAACACTTGTTCATTCTACACTGGAGCACTGTGACGATGCAGACTTCACATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCAGACATTCTTGGAGAGAGTTGCAGAGATGTTTGACATTGTAATTTTTACTGCTAGTCAGAGCATATATGCGAAGCAATTGTTGGATATTCTGGATCCAGATGGAAAGATTATCTCAAGGCGAGCATATCGTGAATCATGCATCTTCT</genome_strand>
        <mrna_strand>TTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATTTGCCAGACATATTAGAGAGGCCAAGTATTTTGCCAAACGAATCAGAAACATGCAAACCGATCACCCTAGTACTTGACCTAGATG...............................................................................................................................................................................................................................................................AAACACTTGTTCATTCTACACTGGAGCACTGTGACGATGCAGACTTCACATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCGGACATTCTTGGAGAGAGTTGCAGAGATGTTTGACATTGTAATTTTTACTGCTAGTCAGAGCATATATGCGAAGCAATTGTTGGATATTCTGGATCCAGATGGAAAGATTATCTCAAGGCGAGCATATCGTGAATCATGCATCTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E254148" ref_strand="+" ref_description="SGN-E254148 [cLEG-34-A10]">
      <seq>gcagacttcacatttcctgttttcttcagcatgaaagaacacattgtctatgtgaaacagcggcctcacctccggacattcttggagagagttgcagagatgtttgacattgtaatttttactgctagtcagagcatatatgcgaagcaattgttggatattctggatccagatggaaagattatctcaaggcgagcatatcgtgaatcatgcatcttctctgatggaagttatacaaaggatttaacggtattaggtgttgatctggcaaaagttgtcattgtagataattccccacaggttttcagattgcaagtgaataatgggattcctattaagagttggtttgatgatccttcagactctgcactaatttctttacttccattcctagagacactggctgatgctgatgatgtccgacctattattgctaagaaattcggtaacaaggaataagaggcccttgtttcttcctagtcatatggagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="54605" stop="56361"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54905" g_stop="55204" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="300" r_length="300" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55205" i_stop="55880" i_length="676">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55881" g_stop="56059" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="479" r_length="179" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E254148" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E254148" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54905" e_stop="55204"/>
          <exon e_start="55881" e_stop="56059"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGACTTCACATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCAGACATTCTTGGAGAGAGTTGCAGAGATGTTTGACATTGTAATTTTTACTGCTAGTCAGAGCATATATGCGAAGCAATTGTTGGATATTCTGGATCCAGATGGAAAGATTATCTCAAGGCGAGCATATCGTGAATCATGCATCTTCTCTGATGGAAGTTATACAAAGGATTTAACGGTATTAGGTGTTGATCTGGCAAAAGTTGTCATTGTAGATAATTCCCCACAGGTAATCTACTTGCATCTTGTTTTTGATGATAAACCTGTTATTACATACCTAAATCTGTTAGTTTGGAATGTGTTAAGTCATGTTAATATGTTTGCTTAGGTCCTATGCTTTGTTCGAGTATTTTAGCCCTGTTAGATAATCTTATGCCACGAGATAACTAGAGAATGTCTTGTACTTGTCATTCTTTTTTGGGGGTATAATGTGGATTGAGAAGATTATAAATGGAGAAACATGGTCTATAAAAATCTACAGCCAACCACAATTTTGAAACTGAGGTGGTTGTAGTAGTAGTTCCTGTATATGCTTATTGGTAGATTCCTCCCCCCTCCCACTCCTCCTCTTTTTTTTTTTTGGGTTATGGATGGTAAGGGGAGTGTACTGGTGAAATCAAGTCGCTAAAATTCATGTGCAATCTGTAAAATAGACACACCACCTTCATCAGGCCATTTCACCGCACTACTCTAGTCGTCTGTAGGCAGAGTTCACAATTGATTGTAAAAGAATATGGTCTCTTGATGGTTGTGAGTTTTTTTCAAGATTCATGTGCTTAGTTGGAAATTGGAGAAAACTAAAAGAGACATGAACAGCAACTTACCAAATGCAGAGTGCTTATTTGCTCATGAAGTAAGGCTATTGTTTTATGTAACTGAATATTAATTTTCCATCTTGTTTTCAGGTTTTCAGATTGCAAGTGAATAATGGGATTCCTATTAAGAGTTGGTTTGATGATCCTTCAGACTCTGCACTAATTTCTTTACTTCCATTCCTAGAGACACTGGCTGATGCTGATGATGTCCGACCTATTATTGCTAAGAAATTCGGTAACAAGGAATAAGAGGCCCTTGTTTCTTCCTA</genome_strand>
        <mrna_strand>GCAGACTTCACATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCGGACATTCTTGGAGAGAGTTGCAGAGATGTTTGACATTGTAATTTTTACTGCTAGTCAGAGCATATATGCGAAGCAATTGTTGGATATTCTGGATCCAGATGGAAAGATTATCTCAAGGCGAGCATATCGTGAATCATGCATCTTCTCTGATGGAAGTTATACAAAGGATTTAACGGTATTAGGTGTTGATCTGGCAAAAGTTGTCATTGTAGATAATTCCCCACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTCAGATTGCAAGTGAATAATGGGATTCCTATTAAGAGTTGGTTTGATGATCCTTCAGACTCTGCACTAATTTCTTTACTTCCATTCCTAGAGACACTGGCTGATGCTGATGATGTCCGACCTATTATTGCTAAGAAATTCGGTAACAAGGAATAAGAGGCCCTTGTTTCTTCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E254149" ref_strand="+" ref_description="SGN-E254149 [cLEG-34-A12]">
      <seq>gcaaacttcacattttctgttttgttcagcatgaaagaacacattgtcgatgtggaacagcggcctcgggtccggacattcttggagagagttgcagagatgttagacattgtaatttttactgctaggcagagcatatatgcgaagcaattgatggatattctggatccagatggaaagattatgtcaaggggagcatatcgtgaatcatgcatcttctctgatggaagttatacaaaggatttaacggtattaggtgttgatctggcaaaaggagtcattgtagataattccccacaagttttcagattgcaagtgaataatgggattcctattaagagtcggtttgatgatccttcagactctgcactaatttctttacttccattcctagagacactggctgatgctgatgatgtccaacctattattgcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="54605" stop="56316"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54905" g_stop="55204" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="300" r_length="300" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55205" i_stop="55880" i_length="676">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="0.990" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55881" g_stop="56016" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="436" r_length="136" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E254149" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>436</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E254149" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54905" e_stop="55204"/>
          <exon e_start="55881" e_stop="56016"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGACTTCACATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCAGACATTCTTGGAGAGAGTTGCAGAGATGTTTGACATTGTAATTTTTACTGCTAGTCAGAGCATATATGCGAAGCAATTGTTGGATATTCTGGATCCAGATGGAAAGATTATCTCAAGGCGAGCATATCGTGAATCATGCATCTTCTCTGATGGAAGTTATACAAAGGATTTAACGGTATTAGGTGTTGATCTGGCAAAAGTTGTCATTGTAGATAATTCCCCACAGGTAATCTACTTGCATCTTGTTTTTGATGATAAACCTGTTATTACATACCTAAATCTGTTAGTTTGGAATGTGTTAAGTCATGTTAATATGTTTGCTTAGGTCCTATGCTTTGTTCGAGTATTTTAGCCCTGTTAGATAATCTTATGCCACGAGATAACTAGAGAATGTCTTGTACTTGTCATTCTTTTTTGGGGGTATAATGTGGATTGAGAAGATTATAAATGGAGAAACATGGTCTATAAAAATCTACAGCCAACCACAATTTTGAAACTGAGGTGGTTGTAGTAGTAGTTCCTGTATATGCTTATTGGTAGATTCCTCCCCCCTCCCACTCCTCCTCTTTTTTTTTTTTGGGTTATGGATGGTAAGGGGAGTGTACTGGTGAAATCAAGTCGCTAAAATTCATGTGCAATCTGTAAAATAGACACACCACCTTCATCAGGCCATTTCACCGCACTACTCTAGTCGTCTGTAGGCAGAGTTCACAATTGATTGTAAAAGAATATGGTCTCTTGATGGTTGTGAGTTTTTTTCAAGATTCATGTGCTTAGTTGGAAATTGGAGAAAACTAAAAGAGACATGAACAGCAACTTACCAAATGCAGAGTGCTTATTTGCTCATGAAGTAAGGCTATTGTTTTATGTAACTGAATATTAATTTTCCATCTTGTTTTCAGGTTTTCAGATTGCAAGTGAATAATGGGATTCCTATTAAGAGTTGGTTTGATGATCCTTCAGACTCTGCACTAATTTCTTTACTTCCATTCCTAGAGACACTGGCTGATGCTGATGATGTCCGACCTATTATTGCTA</genome_strand>
        <mrna_strand>GCAAACTTCACATTTTCTGTTTTGTTCAGCATGAAAGAACACATTGTCGATGTGGAACAGCGGCCTCGGGTCCGGACATTCTTGGAGAGAGTTGCAGAGATGTTAGACATTGTAATTTTTACTGCTAGGCAGAGCATATATGCGAAGCAATTGATGGATATTCTGGATCCAGATGGAAAGATTATGTCAAGGGGAGCATATCGTGAATCATGCATCTTCTCTGATGGAAGTTATACAAAGGATTTAACGGTATTAGGTGTTGATCTGGCAAAAGGAGTCATTGTAGATAATTCCCCACAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTCAGATTGCAAGTGAATAATGGGATTCCTATTAAGAGTCGGTTTGATGATCCTTCAGACTCTGCACTAATTTCTTTACTTCCATTCCTAGAGACACTGGCTGATGCTGATGATGTCCAACCTATTATTGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E345119" ref_strand="+" ref_description="SGN-E345119 [cTOF-22-L13]">
      <seq>acatttcctgttttcttcagcatgaaagaacacattgtctatgtgaaacagcggcctcacctccggacattcttggagagagttgcagagatgtttgacattgtaatttttactgctagtcagagcatatatgcgaagcaattgttggatattctggatccagatggaaagattatctcaaggcgagcatatcgtgaatcatgcatcttctctgatggaagttatacaaaggatttaacggtattaggtgttgatctggcaaaagttgtcattgtagataattccccacaggttttcagattgcaagtgaataatgggattcctattaagagttggtttgatgatccttcagactctgcactaatttctttacttccattcctagagacactggctgatgctgatgatgtccgacctattattgctaagaaattcggtaacaaggaataagaggcccttgtttcttcctagtagttcctctaacacctcctctcttctcatttaaacaaatttatccttcatttacatgctcattgttctatcctcattgagccttgatataattggggtgtgcaataaaaatactagtccttttctggttgagtcagtttttttgtgcgcagtccttttcttgtttccaccctgttgacaactttcttcagtccattgcttactaatttgtttcanatatagttgcaagaagttctccttgtgtgcctgggtacagttatatttgcctagttatttacaagcttgtgtatatgggattgatcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="54614" stop="56662"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54914" g_stop="55204" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55205" i_stop="55880" i_length="676">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55881" g_stop="56362" g_length="482"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="775" r_length="484" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E345119" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>773</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E345119" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54914" e_stop="55204"/>
          <exon e_start="55881" e_stop="56362"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCAGACATTCTTGGAGAGAGTTGCAGAGATGTTTGACATTGTAATTTTTACTGCTAGTCAGAGCATATATGCGAAGCAATTGTTGGATATTCTGGATCCAGATGGAAAGATTATCTCAAGGCGAGCATATCGTGAATCATGCATCTTCTCTGATGGAAGTTATACAAAGGATTTAACGGTATTAGGTGTTGATCTGGCAAAAGTTGTCATTGTAGATAATTCCCCACAGGTAATCTACTTGCATCTTGTTTTTGATGATAAACCTGTTATTACATACCTAAATCTGTTAGTTTGGAATGTGTTAAGTCATGTTAATATGTTTGCTTAGGTCCTATGCTTTGTTCGAGTATTTTAGCCCTGTTAGATAATCTTATGCCACGAGATAACTAGAGAATGTCTTGTACTTGTCATTCTTTTTTGGGGGTATAATGTGGATTGAGAAGATTATAAATGGAGAAACATGGTCTATAAAAATCTACAGCCAACCACAATTTTGAAACTGAGGTGGTTGTAGTAGTAGTTCCTGTATATGCTTATTGGTAGATTCCTCCCCCCTCCCACTCCTCCTCTTTTTTTTTTTTGGGTTATGGATGGTAAGGGGAGTGTACTGGTGAAATCAAGTCGCTAAAATTCATGTGCAATCTGTAAAATAGACACACCACCTTCATCAGGCCATTTCACCGCACTACTCTAGTCGTCTGTAGGCAGAGTTCACAATTGATTGTAAAAGAATATGGTCTCTTGATGGTTGTGAGTTTTTTTCAAGATTCATGTGCTTAGTTGGAAATTGGAGAAAACTAAAAGAGACATGAACAGCAACTTACCAAATGCAGAGTGCTTATTTGCTCATGAAGTAAGGCTATTGTTTTATGTAACTGAATATTAATTTTCCATCTTGTTTTCAGGTTTTCAGATTGCAAGTGAATAATGGGATTCCTATTAAGAGTTGGTTTGATGATCCTTCAGACTCTGCACTAATTTCTTTACTTCCATTCCTAGAGACACTGGCTGATGCTGATGATGTCCGACCTATTATTGCTAAGAAATTCGGTAACAAGGAATAAGAGGCCCTTGTTTCTTCCTAGTAGTTCCTCTAACACCTCCTCTCTTCTCATTTAAACAAATTTATCCTTCATTTACATGCTCATTGTTCTATCCTCATTGAGCCTTGATATAATTGGGGTGTGCAATAAAAATACTAGTCCTTTTCTGGTTGAGTCAGTTTTTTTGTGCGCAGTCCTTTTCTTGTTTCCACCCTGTTGACAACTTTCTTCAGTCCATTGCTTACTAATTTGTTTCAAATATAGTTGCAAGAAGTTCTCCTTGTGTG-CACTGTACAGTTATATTTGCCTAGTTATTTACAAGCTTGTGTATAT-GGATTGATCTA</genome_strand>
        <mrna_strand>ACATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCGGACATTCTTGGAGAGAGTTGCAGAGATGTTTGACATTGTAATTTTTACTGCTAGTCAGAGCATATATGCGAAGCAATTGTTGGATATTCTGGATCCAGATGGAAAGATTATCTCAAGGCGAGCATATCGTGAATCATGCATCTTCTCTGATGGAAGTTATACAAAGGATTTAACGGTATTAGGTGTTGATCTGGCAAAAGTTGTCATTGTAGATAATTCCCCACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTCAGATTGCAAGTGAATAATGGGATTCCTATTAAGAGTTGGTTTGATGATCCTTCAGACTCTGCACTAATTTCTTTACTTCCATTCCTAGAGACACTGGCTGATGCTGATGATGTCCGACCTATTATTGCTAAGAAATTCGGTAACAAGGAATAAGAGGCCCTTGTTTCTTCCTAGTAGTTCCTCTAACACCTCCTCTCTTCTCATTTAAACAAATTTATCCTTCATTTACATGCTCATTGTTCTATCCTCATTGAGCCTTGATATAATTGGGGTGTGCAATAAAAATACTAGTCCTTTTCTGGTTGAGTCAGTTTTTTTGTGCGCAGTCCTTTTCTTGTTTCCACCCTGTTGACAACTTTCTTCAGTCCATTGCTTACTAATTTGTTTCANATATAGTTGCAAGAAGTTCTCCTTGTGTGCCTGGGTACAGTTATATTTGCCTAGTTATTTACAAGCTTGTGTATATGGGATTGATCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E370940" ref_strand="+" ref_description="SGN-E370940 [TUS-27-L19](-)">
      <seq>aattgttggatattctggatccagatggaaagattatctcaaggcgagcatatcgtgaatcatgcatcttctctgatggaagttatacaaaggatttaacggtattaggtgttgatctggcaaaagttgtcattgtagataattccccacaggttttcagattgcaagtgaataatgggattcctattaagagttggtttgatgatccttcagactctgcactaatttctttacttccattcctagagacactggctgatgctgatgatgtccgacctattattgctaagaaattcggtaacaaggaataagaggcccttgtttcttcctagtagttcctctaacacctcctctcttctcatttaaacaaatttatccttcatttacatgctcattgttctatcctcattgagccttgatataattggggtgtgcaataaaaatactagtccttttctggttgagtcagtttttttgtgcgcagtccttttcttgtttccaccctgttgacaactttcttcagtccattgcttactaatttgtttcaaatatagttgcaagaagttctccttgtgtgcactgtacagttatatttgcctagttatttacaagcttgtgtatatggattgatctattgtgaaataaatcgtgatttcgtgtttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="54753" stop="56690"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55053" g_stop="55204" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="152" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55205" i_stop="55880" i_length="676">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55881" g_stop="56391" g_length="511"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="663" r_length="511" r_score="0.998"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56392" i_stop="56482" i_length="91">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="56483" g_stop="56490" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="664" r_stop="671" r_length="8" r_score="0.625"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E370940" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>671</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E370940" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55053" e_stop="55204"/>
          <exon e_start="55881" e_stop="56391"/>
          <exon e_start="56483" e_stop="56490"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGTTGGATATTCTGGATCCAGATGGAAAGATTATCTCAAGGCGAGCATATCGTGAATCATGCATCTTCTCTGATGGAAGTTATACAAAGGATTTAACGGTATTAGGTGTTGATCTGGCAAAAGTTGTCATTGTAGATAATTCCCCACAGGTAATCTACTTGCATCTTGTTTTTGATGATAAACCTGTTATTACATACCTAAATCTGTTAGTTTGGAATGTGTTAAGTCATGTTAATATGTTTGCTTAGGTCCTATGCTTTGTTCGAGTATTTTAGCCCTGTTAGATAATCTTATGCCACGAGATAACTAGAGAATGTCTTGTACTTGTCATTCTTTTTTGGGGGTATAATGTGGATTGAGAAGATTATAAATGGAGAAACATGGTCTATAAAAATCTACAGCCAACCACAATTTTGAAACTGAGGTGGTTGTAGTAGTAGTTCCTGTATATGCTTATTGGTAGATTCCTCCCCCCTCCCACTCCTCCTCTTTTTTTTTTTTGGGTTATGGATGGTAAGGGGAGTGTACTGGTGAAATCAAGTCGCTAAAATTCATGTGCAATCTGTAAAATAGACACACCACCTTCATCAGGCCATTTCACCGCACTACTCTAGTCGTCTGTAGGCAGAGTTCACAATTGATTGTAAAAGAATATGGTCTCTTGATGGTTGTGAGTTTTTTTCAAGATTCATGTGCTTAGTTGGAAATTGGAGAAAACTAAAAGAGACATGAACAGCAACTTACCAAATGCAGAGTGCTTATTTGCTCATGAAGTAAGGCTATTGTTTTATGTAACTGAATATTAATTTTCCATCTTGTTTTCAGGTTTTCAGATTGCAAGTGAATAATGGGATTCCTATTAAGAGTTGGTTTGATGATCCTTCAGACTCTGCACTAATTTCTTTACTTCCATTCCTAGAGACACTGGCTGATGCTGATGATGTCCGACCTATTATTGCTAAGAAATTCGGTAACAAGGAATAAGAGGCCCTTGTTTCTTCCTAGTAGTTCCTCTAACACCTCCTCTCTTCTCATTTAAACAAATTTATCCTTCATTTACATGCTCATTGTTCTATCCTCATTGAGCCTTGATATAATTGGGGTGTGCAATAAAAATACTAGTCCTTTTCTGGTTGAGTCAGTTTTTTTGTGCGCAGTCCTTTTCTTGTTTCCACCCTGTTGACAACTTTCTTCAGTCCATTGCTTACTAATTTGTTTCAAATATAGTTGCAAGAAGTTCTCCTTGTGTGCACTGTACAGTTATATTTGCCTAGTTATTTACAAGCTTGTGTATATGGATTGATCTATTGTGAAATAAATCGTGATTTCGTGTTTCGTTATCGTAGCATAAAGCTGTCCGTTGGACTAAATTACACCTGTTCATTGTATAGCCTTTGCACAATCTAGTGTACTTGTCAATTTTGCAGTAACACAA</genome_strand>
        <mrna_strand>AATTGTTGGATATTCTGGATCCAGATGGAAAGATTATCTCAAGGCGAGCATATCGTGAATCATGCATCTTCTCTGATGGAAGTTATACAAAGGATTTAACGGTATTAGGTGTTGATCTGGCAAAAGTTGTCATTGTAGATAATTCCCCACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTCAGATTGCAAGTGAATAATGGGATTCCTATTAAGAGTTGGTTTGATGATCCTTCAGACTCTGCACTAATTTCTTTACTTCCATTCCTAGAGACACTGGCTGATGCTGATGATGTCCGACCTATTATTGCTAAGAAATTCGGTAACAAGGAATAAGAGGCCCTTGTTTCTTCCTAGTAGTTCCTCTAACACCTCCTCTCTTCTCATTTAAACAAATTTATCCTTCATTTACATGCTCATTGTTCTATCCTCATTGAGCCTTGATATAATTGGGGTGTGCAATAAAAATACTAGTCCTTTTCTGGTTGAGTCAGTTTTTTTGTGCGCAGTCCTTTTCTTGTTTCCACCCTGTTGACAACTTTCTTCAGTCCATTGCTTACTAATTTGTTTCAAATATAGTTGCAAGAAGTTCTCCTTGTGTGCACTGTACAGTTATATTTGCCTAGTTATTTACAAGCTTGTGTATATGGATTGATCTATTGTGAAATAAATCGTGATTTCGTGTTTA...........................................................................................AAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E244028" ref_strand="+" ref_description="SGN-E244028 [cLEE-1-K6]">
      <seq>tccattcctagagacactggctgatgctgatgatgtccgacctattattgctaagaaattcggtaacaaggaataagaggcccttgtttcttcctagtagttcctctaacacctcctctcttctcatttaaacaaatttatccttcatttacatgctcattgttctatcctcattgagccttgatataattggggtgtgcaataaaaatactagtccttatctggttgagtcagtttttttgtgcgcagtccttttcttgtttccaccctgttgacaactttcttcagtccattgcttactaatcaggttcaaatatagttgcaagacgttctccttgtgtgcactgtacagatatattagcctaggtatttacaagcttgtgtctatggatcgatctattgagacataaatcgtgatttcgtgttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="55664" stop="56689"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55964" g_stop="56391" g_length="428"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="428" r_length="428" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E244028" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>428</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E244028" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55964" e_stop="56391"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCATTCCTAGAGACACTGGCTGATGCTGATGATGTCCGACCTATTATTGCTAAGAAATTCGGTAACAAGGAATAAGAGGCCCTTGTTTCTTCCTAGTAGTTCCTCTAACACCTCCTCTCTTCTCATTTAAACAAATTTATCCTTCATTTACATGCTCATTGTTCTATCCTCATTGAGCCTTGATATAATTGGGGTGTGCAATAAAAATACTAGTCCTTTTCTGGTTGAGTCAGTTTTTTTGTGCGCAGTCCTTTTCTTGTTTCCACCCTGTTGACAACTTTCTTCAGTCCATTGCTTACTAATTTGTTTCAAATATAGTTGCAAGAAGTTCTCCTTGTGTGCACTGTACAGTTATATTTGCCTAGTTATTTACAAGCTTGTGTATATGGATTGATCTATTGTGAAATAAATCGTGATTTCGTGTTTC</genome_strand>
        <mrna_strand>TCCATTCCTAGAGACACTGGCTGATGCTGATGATGTCCGACCTATTATTGCTAAGAAATTCGGTAACAAGGAATAAGAGGCCCTTGTTTCTTCCTAGTAGTTCCTCTAACACCTCCTCTCTTCTCATTTAAACAAATTTATCCTTCATTTACATGCTCATTGTTCTATCCTCATTGAGCCTTGATATAATTGGGGTGTGCAATAAAAATACTAGTCCTTATCTGGTTGAGTCAGTTTTTTTGTGCGCAGTCCTTTTCTTGTTTCCACCCTGTTGACAACTTTCTTCAGTCCATTGCTTACTAATCAGGTTCAAATATAGTTGCAAGACGTTCTCCTTGTGTGCACTGTACAGATATATTAGCCTAGGTATTTACAAGCTTGTGTCTATGGATCGATCTATTGAGACATAAATCGTGATTTCGTGTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E274591" ref_strand="+" ref_description="SGN-E274591 [cLEN-11-K3]">
      <seq>ctcttctcatttaaacaaatttatccttcatttacatgctcattgttctatcctcattgagccttgatataattggggtgtgcaataaaaatactagtccttttctggttgagtcagtttttttgtgcgcagtccttttcttgtttccaccctgttgacaactttcttcagtccattgcttactaatttgtttcaaatatagttgcaagaagttctccttgtgtgcactgtacagttatatttgcctagttatttacaagcttgtgtatatggattgatctattgtgaaataaatcgtgatttcgtgtttctttatcgtagcataaagctgtccgttggactaaattacacctgttcattgtatagcctttgcacaatctagtgtacttatcaattttgcagtaacacaagttcccaatcaaaggctaattggccaaaaacatcagggttggcagtcgaaataggtttagaagatatttggatcatcattagatgattctttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="55781" stop="56884"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56081" g_stop="56584" g_length="504"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="504" r_length="504" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E274591" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>504</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E274591" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56081" e_stop="56584"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTCTCATTTAAACAAATTTATCCTTCATTTACATGCTCATTGTTCTATCCTCATTGAGCCTTGATATAATTGGGGTGTGCAATAAAAATACTAGTCCTTTTCTGGTTGAGTCAGTTTTTTTGTGCGCAGTCCTTTTCTTGTTTCCACCCTGTTGACAACTTTCTTCAGTCCATTGCTTACTAATTTGTTTCAAATATAGTTGCAAGAAGTTCTCCTTGTGTGCACTGTACAGTTATATTTGCCTAGTTATTTACAAGCTTGTGTATATGGATTGATCTATTGTGAAATAAATCGTGATTTCGTGTTTCGTTATCGTAGCATAAAGCTGTCCGTTGGACTAAATTACACCTGTTCATTGTATAGCCTTTGCACAATCTAGTGTACTTGTCAATTTTGCAGTAACACAAGTTCCCAATCAAAGGCTAATTGGCCAAAAACATCAGGGTTGGCAGTCGAAATAGGTTTAGAAGATATTTGGATCATCATTAGATGATTCTTTAA</genome_strand>
        <mrna_strand>CTCTTCTCATTTAAACAAATTTATCCTTCATTTACATGCTCATTGTTCTATCCTCATTGAGCCTTGATATAATTGGGGTGTGCAATAAAAATACTAGTCCTTTTCTGGTTGAGTCAGTTTTTTTGTGCGCAGTCCTTTTCTTGTTTCCACCCTGTTGACAACTTTCTTCAGTCCATTGCTTACTAATTTGTTTCAAATATAGTTGCAAGAAGTTCTCCTTGTGTGCACTGTACAGTTATATTTGCCTAGTTATTTACAAGCTTGTGTATATGGATTGATCTATTGTGAAATAAATCGTGATTTCGTGTTTCTTTATCGTAGCATAAAGCTGTCCGTTGGACTAAATTACACCTGTTCATTGTATAGCCTTTGCACAATCTAGTGTACTTATCAATTTTGCAGTAACACAAGTTCCCAATCAAAGGCTAATTGGCCAAAAACATCAGGGTTGGCAGTCGAAATAGGTTTAGAAGATATTTGGATCATCATTAGATGATTCTTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E240379" ref_strand="+" ref_description="SGN-E240379 [cLED-25-B5]">
      <seq>atcattgtgggggtcagtgtgtagttccgataatttgtttgttaggtatataattgcaggatgttccttggtatacctgcttcccatccttctagtattctcgcccattcaaatcatgatattattgactttcttttcgatcaaaatgatttcataaccacacacaaaaaaaagcctcttccctttgaacatgatgcttgatattgacatgagggttctatttcccggtattgaatagtttaggcaattaaattctgcaagaatggatgttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="57982" stop="58855"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58282" g_stop="58555" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E240379" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>274</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E240379" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58282" e_stop="58555"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCATTGTGGGGGTCAGTGTGTAGTTCCGATAATTTGTTTGTTAGGTATATAATTGCAGGATGTTCCTTGGTATACCTGCTTCCCATCCTTCTAGTATTCTCGCCCATTCAAATCATGATATTATTGACTTTCTTTTCGATCAAAATGATTTCATAACCACACACAAAAAAAAGCCTCTTCCCTTTGAACATGATGCTTGATATTGACATGAGGGTTCTATTTCCCGGTATTGAATAGTTTAGGCAATTAAATTCTGCAAGAATGGATGTTTTC</genome_strand>
        <mrna_strand>ATCATTGTGGGGGTCAGTGTGTAGTTCCGATAATTTGTTTGTTAGGTATATAATTGCAGGATGTTCCTTGGTATACCTGCTTCCCATCCTTCTAGTATTCTCGCCCATTCAAATCATGATATTATTGACTTTCTTTTCGATCAAAATGATTTCATAACCACACACAAAAAAAAGCCTCTTCCCTTTGAACATGATGCTTGATATTGACATGAGGGTTCTATTTCCCGGTATTGAATAGTTTAGGCAATTAAATTCTGCAAGAATGGATGTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E242249" ref_strand="+" ref_description="SGN-E242249 [cLED-37-H2]">
      <seq>gcccattcaaatcatgatattattgactttcttttcgatcaaaatgatttcataaccacacacaaaaaaaagcctcttccctttgaacatgatgcttgatattgacatgagggttctatttcccggtattgaataggttaggcaattaaattctgcaagaatggatgttttctaggtggtgataaggtggtaggggaagctgcaaacgctagataatgtctatggtgatgtagaggttgggactagactaccaattggatgtttcccagtcgaacccact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="58084" stop="58963"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58384" g_stop="58663" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="280" r_length="280" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E242249" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>280</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E242249" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58384" e_stop="58663"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCCATTCAAATCATGATATTATTGACTTTCTTTTCGATCAAAATGATTTCATAACCACACACAAAAAAAAGCCTCTTCCCTTTGAACATGATGCTTGATATTGACATGAGGGTTCTATTTCCCGGTATTGAATAGTTTAGGCAATTAAATTCTGCAAGAATGGATGTTTTCTAGGTGGTGATAAGGTGGTAGGGGAAGCTGCAAACGCTAGATAATGTCTATGGTGATGTAGAGGTTGGGACTAGACTACCAATTGGATGTTTCCCAGTCGAACCCTCT</genome_strand>
        <mrna_strand>GCCCATTCAAATCATGATATTATTGACTTTCTTTTCGATCAAAATGATTTCATAACCACACACAAAAAAAAGCCTCTTCCCTTTGAACATGATGCTTGATATTGACATGAGGGTTCTATTTCCCGGTATTGAATAGGTTAGGCAATTAAATTCTGCAAGAATGGATGTTTTCTAGGTGGTGATAAGGTGGTAGGGGAAGCTGCAAACGCTAGATAATGTCTATGGTGATGTAGAGGTTGGGACTAGACTACCAATTGGATGTTTCCCAGTCGAACCCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E390414" ref_strand="+" ref_description="SGN-E390414 [TUS-41-A18]">
      <seq>gaaaatccttaagattctgatttgatatcttcattcgtatctctctttctcttctgtcaaatattttccgtatcttctcgaaatcaacatcacatcccccatatatatatatataattcacttcacaaactcacaaattcataaaaacaaatacaaattcgtaaattttctttttcttcttacaatcaaacaatggatactcaatttcatgttttagctgttgatgacagtattattgatagaaaactcattgaaagacttctcaaaacttcatcttatcaagttactgttgttgattctggaagtaaagctttggagttgcttgaagtaagagaaacgggagtgaatttgataattacagattatagtatgccggaaatgactggttatgatttattgaggaaagttaaaggatcatcttatttgaaggatattccagttataattatgtcatcggaaaatgttccatcaaggattaatagatttttagaagaaggagctgaagagttttttctgaagccagttcaacaatcagatgttaacagaattaagcctcatttaatgagggagaaacctaattctctaaagagaaaagctatggttgaatgcatttcacctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="88620" stop="89916"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88920" g_stop="89196" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="283" r_length="283" r_score="0.931"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89197" i_stop="89279" i_length="83">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89280" g_stop="89616" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="620" r_length="337" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E390414" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E390414" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88920" e_stop="89196"/>
          <exon e_start="89280" e_stop="89616"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAATCCTTAAGATTCTGATTTGATATCTTCATTCGTATCTCTCTTTCTCTTCTGTCAAATATTTTCCGTATCTTCTCGAAATCAACATCACATCCCCCATATATATATA-A---TTCACTTCACAAACTCACAAATTCATAAAAACAAATACAAATTCATAAA--AAGAAATTCTTCTTACAATCAAACAATGGATACTCAATTTCATGTTTTAGCTGTTGATGACAGTATTATTGATAGAAAACTCATTGAAAGACTTCTCAAAACTTCATCTTATCAAGGTAATTAAGTGAATTCAAAATTCTTTTTTCAACGAAAATCATCTGTTTTTTTTTTTCTAATATGTTTATTTTTTAATTAACAGTTACTGTTGTTGATTCTGGAAGTAAAGCTTTGGAGTTGCTTGAAGTAAGAGAAACGGGAGTGAATTTGATAATTACAGATTATAGTATGCCGGAAATGACTGGTTATGATTTATTGAGGAAAGTTAAAGGATCATCTTATTTGAAGGATATTCCAGTTATAATTATGTCATCGGAAAATGTTCCATCAAGGATTAATAGATGTTTAGAAGAAGGAGCTGAAGAGTTTTTTCTGAAGCCAGTTCAACAATCAGATGTTAACAGAATTAAGCCTCATTTAATGAGGGAGAAACCTAATTCTCTAAAGAGAAAAGCTATGGTTGAATGCATTTCACCTGA</genome_strand>
        <mrna_strand>GAAAATCCTTAAGATTCTGATTTGATATCTTCATTCGTATCTCTCTTTCTCTTCTGTCAAATATTTTCCGTATCTTCTCGAAATCAACATCACATCCCCCATATATATATATATAATTCACTTCACAAACTCACAAATTCATAAAAACAAATACAAATTCGTAAATTTTCTTTTTCTTCTTACAATCAAACAATGGATACTCAATTTCATGTTTTAGCTGTTGATGACAGTATTATTGATAGAAAACTCATTGAAAGACTTCTCAAAACTTCATCTTATCAAG...................................................................................TTACTGTTGTTGATTCTGGAAGTAAAGCTTTGGAGTTGCTTGAAGTAAGAGAAACGGGAGTGAATTTGATAATTACAGATTATAGTATGCCGGAAATGACTGGTTATGATTTATTGAGGAAAGTTAAAGGATCATCTTATTTGAAGGATATTCCAGTTATAATTATGTCATCGGAAAATGTTCCATCAAGGATTAATAGATTTTTAGAAGAAGGAGCTGAAGAGTTTTTTCTGAAGCCAGTTCAACAATCAGATGTTAACAGAATTAAGCCTCATTTAATGAGGGAGAAACCTAATTCTCTAAAGAGAAAAGCTATGGTTGAATGCATTTCACCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E390415" ref_strand="+" ref_description="SGN-E390415 [TUS-41-A20]">
      <seq>gaaaatccttaagattctgatttgatatcttcattcgtatctctctttctcttctgtcaaatattttccgtatcttctcgaaatcaacatcacatcccccatatatatatatataattcacttcacaaactcacaaattcataaaaacaaatacaaattcgtaaattttctttttcttcttacaatcaaacaatggatactcaatttcatgttttagctgttgatgacagtattattgatagaaaactcattgaaagacttctcaaaacttcatcttatcaagttactgttgttgattctggaagtaaagctttggagttgcttgaagtaagagaaacgggagtgaatttgataattacagattatagtatgccggaaatgactggttatgatttattgaggaaagttaaaggatcatcttatttgaaggatattccagttataattatgtcatcggaaaatgttccatcaaggattaatagatttttagaagaaggagctgaagagttttttctgaagccagttcaacaatcagatgttaacagaattaagcctcatttaatgagggagaaacctaattctctaaagagaaaagctatggttgaatgcatttcacctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="88620" stop="89915"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88920" g_stop="89196" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="283" r_length="283" r_score="0.931"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89197" i_stop="89279" i_length="83">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89280" g_stop="89615" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="619" r_length="336" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E390415" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E390415" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88920" e_stop="89196"/>
          <exon e_start="89280" e_stop="89615"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAATCCTTAAGATTCTGATTTGATATCTTCATTCGTATCTCTCTTTCTCTTCTGTCAAATATTTTCCGTATCTTCTCGAAATCAACATCACATCCCCCATATATATATA-A---TTCACTTCACAAACTCACAAATTCATAAAAACAAATACAAATTCATAAA--AAGAAATTCTTCTTACAATCAAACAATGGATACTCAATTTCATGTTTTAGCTGTTGATGACAGTATTATTGATAGAAAACTCATTGAAAGACTTCTCAAAACTTCATCTTATCAAGGTAATTAAGTGAATTCAAAATTCTTTTTTCAACGAAAATCATCTGTTTTTTTTTTTCTAATATGTTTATTTTTTAATTAACAGTTACTGTTGTTGATTCTGGAAGTAAAGCTTTGGAGTTGCTTGAAGTAAGAGAAACGGGAGTGAATTTGATAATTACAGATTATAGTATGCCGGAAATGACTGGTTATGATTTATTGAGGAAAGTTAAAGGATCATCTTATTTGAAGGATATTCCAGTTATAATTATGTCATCGGAAAATGTTCCATCAAGGATTAATAGATGTTTAGAAGAAGGAGCTGAAGAGTTTTTTCTGAAGCCAGTTCAACAATCAGATGTTAACAGAATTAAGCCTCATTTAATGAGGGAGAAACCTAATTCTCTAAAGAGAAAAGCTATGGTTGAATGCATTTCACCTG</genome_strand>
        <mrna_strand>GAAAATCCTTAAGATTCTGATTTGATATCTTCATTCGTATCTCTCTTTCTCTTCTGTCAAATATTTTCCGTATCTTCTCGAAATCAACATCACATCCCCCATATATATATATATAATTCACTTCACAAACTCACAAATTCATAAAAACAAATACAAATTCGTAAATTTTCTTTTTCTTCTTACAATCAAACAATGGATACTCAATTTCATGTTTTAGCTGTTGATGACAGTATTATTGATAGAAAACTCATTGAAAGACTTCTCAAAACTTCATCTTATCAAG...................................................................................TTACTGTTGTTGATTCTGGAAGTAAAGCTTTGGAGTTGCTTGAAGTAAGAGAAACGGGAGTGAATTTGATAATTACAGATTATAGTATGCCGGAAATGACTGGTTATGATTTATTGAGGAAAGTTAAAGGATCATCTTATTTGAAGGATATTCCAGTTATAATTATGTCATCGGAAAATGTTCCATCAAGGATTAATAGATTTTTAGAAGAAGGAGCTGAAGAGTTTTTTCTGAAGCCAGTTCAACAATCAGATGTTAACAGAATTAAGCCTCATTTAATGAGGGAGAAACCTAATTCTCTAAAGAGAAAAGCTATGGTTGAATGCATTTCACCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E235500" ref_strand="+" ref_description="SGN-E235500 [cLED-11-M10]">
      <seq>aaaatccttaagattctgatttgatatcttcattcgtatctctctttctcttctgtcaaatattttccgtatcttctcgaaatcaacatcacatcccccatatatatatatataattcacttcacaaactcacaaattcataaaaacaaatacaaattcgtaaattttctttttcttcttacaatcaaacaatggatactcaatttcatgttttagctgttgatgacagtattattgatagaaaactcattgaaagacttctcaaaacttcatcttatcaagttactgttggtgattctggaagtaaagctttggagttgcttgaagtaagagaaacgggagtgaatttgataattacagattatagcatgccggaaatgactggttatgatttattgaggaaagttaaaggatcatcttatttgaaggatattccagctataattatgtcatcggaaaatgttccatcaaggattaatagattcttagaagaaggagctgaagagttttttctgaagccagttcaacaatcagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="88621" stop="89833"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88921" g_stop="89196" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="282" r_length="282" r_score="0.931"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89197" i_stop="89279" i_length="83">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89280" g_stop="89533" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="536" r_length="254" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E235500" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E235500" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88921" e_stop="89196"/>
          <exon e_start="89280" e_stop="89533"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCCTTAAGATTCTGATTTGATATCTTCATTCGTATCTCTCTTTCTCTTCTGTCAAATATTTTCCGTATCTTCTCGAAATCAACATCACATCCCCCATATATATATA-A---TTCACTTCACAAACTCACAAATTCATAAAAACAAATACAAATTCATAAA--AAGAAATTCTTCTTACAATCAAACAATGGATACTCAATTTCATGTTTTAGCTGTTGATGACAGTATTATTGATAGAAAACTCATTGAAAGACTTCTCAAAACTTCATCTTATCAAGGTAATTAAGTGAATTCAAAATTCTTTTTTCAACGAAAATCATCTGTTTTTTTTTTTCTAATATGTTTATTTTTTAATTAACAGTTACTGTTGTTGATTCTGGAAGTAAAGCTTTGGAGTTGCTTGAAGTAAGAGAAACGGGAGTGAATTTGATAATTACAGATTATAGTATGCCGGAAATGACTGGTTATGATTTATTGAGGAAAGTTAAAGGATCATCTTATTTGAAGGATATTCCAGTTATAATTATGTCATCGGAAAATGTTCCATCAAGGATTAATAGATGTTTAGAAGAAGGAGCTGAAGAGTTTTTTCTGAAGCCAGTTCAACAATCAGAT</genome_strand>
        <mrna_strand>AAAATCCTTAAGATTCTGATTTGATATCTTCATTCGTATCTCTCTTTCTCTTCTGTCAAATATTTTCCGTATCTTCTCGAAATCAACATCACATCCCCCATATATATATATATAATTCACTTCACAAACTCACAAATTCATAAAAACAAATACAAATTCGTAAATTTTCTTTTTCTTCTTACAATCAAACAATGGATACTCAATTTCATGTTTTAGCTGTTGATGACAGTATTATTGATAGAAAACTCATTGAAAGACTTCTCAAAACTTCATCTTATCAAG...................................................................................TTACTGTTGGTGATTCTGGAAGTAAAGCTTTGGAGTTGCTTGAAGTAAGAGAAACGGGAGTGAATTTGATAATTACAGATTATAGCATGCCGGAAATGACTGGTTATGATTTATTGAGGAAAGTTAAAGGATCATCTTATTTGAAGGATATTCCAGCTATAATTATGTCATCGGAAAATGTTCCATCAAGGATTAATAGATTCTTAGAAGAAGGAGCTGAAGAGTTTTTTCTGAAGCCAGTTCAACAATCAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E200229" ref_strand="+" ref_description="SGN-E200229 [cLEC-12-D18]">
      <seq>aaattttctttttcttcttacaatcaaacaatggatactcaatttcatgttttagctgttgatgacagtattattgatagaaaactcattgaaagacttctcaaaacttcatcttatcaagttactgttgttgattctggaagtaaagctttggagttgcttgaagtaagagaaacgggagtgaatttgataattacagattatagtatgccggaaatgactggttatgatttattgaggaaagttaaaggatcatcttatttgaaggatattccagttataattatgtcatcggaaaatgttccatcaaggattaatagatgtttagaagaaggagctgaagagttttttctgaagccagttcaacaatcagatgttaacagaattaagcctcatttaatgagggagaaacctaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="88787" stop="89875"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88944" g_stop="88955" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="12" r_length="12" r_score="0.667"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88956" i_stop="89087" i_length="132">
            <donor d_prob="0.810" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89088" g_stop="89196" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="121" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89197" i_stop="89279" i_length="83">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89280" g_stop="89575" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="417" r_length="296" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E200229" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E200229" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88944" e_stop="88955"/>
          <exon e_start="89088" e_stop="89196"/>
          <exon e_start="89280" e_stop="89575"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATCTTCATTCGTATCTCTCTTTCTCTTCTGTCAAATATTTTCCGTATCTTCTCGAAATCAACATCACATCCCCCATATATATATAATTCACTTCACAAACTCACAAATTCATAAAAACAAATACAAATTCATAAAAAGAAATTCTTCTTACAATCAAACAATGGATACTCAATTTCATGTTTTAGCTGTTGATGACAGTATTATTGATAGAAAACTCATTGAAAGACTTCTCAAAACTTCATCTTATCAAGGTAATTAAGTGAATTCAAAATTCTTTTTTCAACGAAAATCATCTGTTTTTTTTTTTCTAATATGTTTATTTTTTAATTAACAGTTACTGTTGTTGATTCTGGAAGTAAAGCTTTGGAGTTGCTTGAAGTAAGAGAAACGGGAGTGAATTTGATAATTACAGATTATAGTATGCCGGAAATGACTGGTTATGATTTATTGAGGAAAGTTAAAGGATCATCTTATTTGAAGGATATTCCAGTTATAATTATGTCATCGGAAAATGTTCCATCAAGGATTAATAGATGTTTAGAAGAAGGAGCTGAAGAGTTTTTTCTGAAGCCAGTTCAACAATCAGATGTTAACAGAATTAAGCCTCATTTAATGAGGGAGAAACCTAAT</genome_strand>
        <mrna_strand>AAATTTTCTTTT....................................................................................................................................TCTTCTTACAATCAAACAATGGATACTCAATTTCATGTTTTAGCTGTTGATGACAGTATTATTGATAGAAAACTCATTGAAAGACTTCTCAAAACTTCATCTTATCAAG...................................................................................TTACTGTTGTTGATTCTGGAAGTAAAGCTTTGGAGTTGCTTGAAGTAAGAGAAACGGGAGTGAATTTGATAATTACAGATTATAGTATGCCGGAAATGACTGGTTATGATTTATTGAGGAAAGTTAAAGGATCATCTTATTTGAAGGATATTCCAGTTATAATTATGTCATCGGAAAATGTTCCATCAAGGATTAATAGATGTTTAGAAGAAGGAGCTGAAGAGTTTTTTCTGAAGCCAGTTCAACAATCAGATGTTAACAGAATTAAGCCTCATTTAATGAGGGAGAAACCTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E243647" ref_strand="+" ref_description="SGN-E243647 [cLED-34-L23]">
      <seq>ttcattcgtatctctctttctcttctgtcaaatattttccgtatcttctcgaaatcaacatcacatcccccatatatatatatataattcacttcacaaactcacaaattcataaaaacaaatacaaattcgtaaattttctttttcttcttacaatcaaacaatggatactcaatttcatgttttagctgttgatgacagtattattgatagaaaactcattgaaagacttctcaaaacttcatcttatcaagttactgttgttgattctggaagtaaagctttggagttgcttgaagtaagagaaacgggagtgaatttgataattacagattatagtatgccggaaatgactggttatgatttattgaggaaagttaaaggatcatcttatttgaaggatattccagttataattatgtcatcggaaaatgttccatcaaggattaatagatgtttagaagaaggagctgaagagttttttctgaagccagttcaacaatcagatgttaacagaattaagcctcatttaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="88649" stop="89861"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88949" g_stop="89196" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="254" r_length="254" r_score="0.923"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89197" i_stop="89279" i_length="83">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89280" g_stop="89561" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="536" r_length="282" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E243647" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E243647" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88949" e_stop="89196"/>
          <exon e_start="89280" e_stop="89561"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTCGTATCTCTCTTTCTCTTCTGTCAAATATTTTCCGTATCTTCTCGAAATCAACATCACATCCCCCATAT----ATATATAATTCACTTCACAAACTCACAAATTCATAAAAACAAATACAAATTCATAAA-AAGAAA-TTCTTCTTACAATCAAACAATGGATACTCAATTTCATGTTTTAGCTGTTGATGACAGTATTATTGATAGAAAACTCATTGAAAGACTTCTCAAAACTTCATCTTATCAAGGTAATTAAGTGAATTCAAAATTCTTTTTTCAACGAAAATCATCTGTTTTTTTTTTTCTAATATGTTTATTTTTTAATTAACAGTTACTGTTGTTGATTCTGGAAGTAAAGCTTTGGAGTTGCTTGAAGTAAGAGAAACGGGAGTGAATTTGATAATTACAGATTATAGTATGCCGGAAATGACTGGTTATGATTTATTGAGGAAAGTTAAAGGATCATCTTATTTGAAGGATATTCCAGTTATAATTATGTCATCGGAAAATGTTCCATCAAGGATTAATAGATGTTTAGAAGAAGGAGCTGAAGAGTTTTTTCTGAAGCCAGTTCAACAATCAGATGTTAACAGAATTAAGCCTCATTTAATGA</genome_strand>
        <mrna_strand>TTCATTCGTATCTCTCTTTCTCTTCTGTCAAATATTTTCCGTATCTTCTCGAAATCAACATCACATCCCCCATATATATATATATAATTCACTTCACAAACTCACAAATTCATAAAAACAAATACAAATTCGTAAATTTTCTTTTTCTTCTTACAATCAAACAATGGATACTCAATTTCATGTTTTAGCTGTTGATGACAGTATTATTGATAGAAAACTCATTGAAAGACTTCTCAAAACTTCATCTTATCAAG...................................................................................TTACTGTTGTTGATTCTGGAAGTAAAGCTTTGGAGTTGCTTGAAGTAAGAGAAACGGGAGTGAATTTGATAATTACAGATTATAGTATGCCGGAAATGACTGGTTATGATTTATTGAGGAAAGTTAAAGGATCATCTTATTTGAAGGATATTCCAGTTATAATTATGTCATCGGAAAATGTTCCATCAAGGATTAATAGATGTTTAGAAGAAGGAGCTGAAGAGTTTTTTCTGAAGCCAGTTCAACAATCAGATGTTAACAGAATTAAGCCTCATTTAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E242890" ref_strand="+" ref_description="SGN-E242890 [cLED-31-A10]">
      <seq>ttcattcgtatctctctttctcttctgtcaaatattttccgtatcttctcgaaatcaacatcacatcccccatatatatatatataattcacttcacaaactcacaaattcataaaaacaaatacaaattcgtaaattttctttttcttcttacaatcaaacaatggatactcaatttcatgttttagctgttgatgacagtattattgatagaaaactcattgaaagacttctcaaaacttcatcttatcaagttactgttgttgattctggaagtaaagctttggagttgcttgaagtaagagaaacgggagtgaatttgataattacagattatagtatgccggaaatgactggttatgatttattgaggaaagttaaaggatcatcttatttgaaggatattccagttataattatgtcatcggaaaatgttccatcaaggattaatagatgtttagaagaaggagctgaagagttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="88649" stop="89808"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88949" g_stop="89196" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="254" r_length="254" r_score="0.923"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89197" i_stop="89279" i_length="83">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89280" g_stop="89508" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="483" r_length="229" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E242890" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E242890" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88949" e_stop="89196"/>
          <exon e_start="89280" e_stop="89508"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTCGTATCTCTCTTTCTCTTCTGTCAAATATTTTCCGTATCTTCTCGAAATCAACATCACATCCCCCATAT----ATATATAATTCACTTCACAAACTCACAAATTCATAAAAACAAATACAAATTCATAAA-AAGAAA-TTCTTCTTACAATCAAACAATGGATACTCAATTTCATGTTTTAGCTGTTGATGACAGTATTATTGATAGAAAACTCATTGAAAGACTTCTCAAAACTTCATCTTATCAAGGTAATTAAGTGAATTCAAAATTCTTTTTTCAACGAAAATCATCTGTTTTTTTTTTTCTAATATGTTTATTTTTTAATTAACAGTTACTGTTGTTGATTCTGGAAGTAAAGCTTTGGAGTTGCTTGAAGTAAGAGAAACGGGAGTGAATTTGATAATTACAGATTATAGTATGCCGGAAATGACTGGTTATGATTTATTGAGGAAAGTTAAAGGATCATCTTATTTGAAGGATATTCCAGTTATAATTATGTCATCGGAAAATGTTCCATCAAGGATTAATAGATGTTTAGAAGAAGGAGCTGAAGAGTTTTT</genome_strand>
        <mrna_strand>TTCATTCGTATCTCTCTTTCTCTTCTGTCAAATATTTTCCGTATCTTCTCGAAATCAACATCACATCCCCCATATATATATATATAATTCACTTCACAAACTCACAAATTCATAAAAACAAATACAAATTCGTAAATTTTCTTTTTCTTCTTACAATCAAACAATGGATACTCAATTTCATGTTTTAGCTGTTGATGACAGTATTATTGATAGAAAACTCATTGAAAGACTTCTCAAAACTTCATCTTATCAAG...................................................................................TTACTGTTGTTGATTCTGGAAGTAAAGCTTTGGAGTTGCTTGAAGTAAGAGAAACGGGAGTGAATTTGATAATTACAGATTATAGTATGCCGGAAATGACTGGTTATGATTTATTGAGGAAAGTTAAAGGATCATCTTATTTGAAGGATATTCCAGTTATAATTATGTCATCGGAAAATGTTCCATCAAGGATTAATAGATGTTTAGAAGAAGGAGCTGAAGAGTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E242218" ref_strand="+" ref_description="SGN-E242218 [cLED-37-I14]">
      <seq>ttcattcgtatctctctttctcttctgtcaaatattttccgtatcttctcgaaatcaacatcacatcccccatatatatatatataattcacttcacaaactcacaaattcataaaaacaaatacaaattcgtaaattttctttttcttcttacaatcaaacaatggatactcaatttcatgttttagctgttgatgacagtattattgatagaaaactcattgaaagacttctcaaaacttcatcttatcaagttactgttgttgattctggaagtaaagctttggagttgcttgaagtaagagaaacgggagtgaatttgataattacagattatagtatgccggaaatgactggttatgatttattgaggaaagttaaaggatcatcttatttgaaggatattccagttataattatgtcatcggaaaatgttccatcaaggattaatagatgtttaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="88649" stop="89787"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88949" g_stop="89196" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="254" r_length="254" r_score="0.923"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89197" i_stop="89279" i_length="83">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89280" g_stop="89487" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="462" r_length="208" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E242218" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>456</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E242218" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88949" e_stop="89196"/>
          <exon e_start="89280" e_stop="89487"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTCGTATCTCTCTTTCTCTTCTGTCAAATATTTTCCGTATCTTCTCGAAATCAACATCACATCCCCCATAT----ATATATAATTCACTTCACAAACTCACAAATTCATAAAAACAAATACAAATTCATAAA-AAGAAA-TTCTTCTTACAATCAAACAATGGATACTCAATTTCATGTTTTAGCTGTTGATGACAGTATTATTGATAGAAAACTCATTGAAAGACTTCTCAAAACTTCATCTTATCAAGGTAATTAAGTGAATTCAAAATTCTTTTTTCAACGAAAATCATCTGTTTTTTTTTTTCTAATATGTTTATTTTTTAATTAACAGTTACTGTTGTTGATTCTGGAAGTAAAGCTTTGGAGTTGCTTGAAGTAAGAGAAACGGGAGTGAATTTGATAATTACAGATTATAGTATGCCGGAAATGACTGGTTATGATTTATTGAGGAAAGTTAAAGGATCATCTTATTTGAAGGATATTCCAGTTATAATTATGTCATCGGAAAATGTTCCATCAAGGATTAATAGATGTTTAGA</genome_strand>
        <mrna_strand>TTCATTCGTATCTCTCTTTCTCTTCTGTCAAATATTTTCCGTATCTTCTCGAAATCAACATCACATCCCCCATATATATATATATAATTCACTTCACAAACTCACAAATTCATAAAAACAAATACAAATTCGTAAATTTTCTTTTTCTTCTTACAATCAAACAATGGATACTCAATTTCATGTTTTAGCTGTTGATGACAGTATTATTGATAGAAAACTCATTGAAAGACTTCTCAAAACTTCATCTTATCAAG...................................................................................TTACTGTTGTTGATTCTGGAAGTAAAGCTTTGGAGTTGCTTGAAGTAAGAGAAACGGGAGTGAATTTGATAATTACAGATTATAGTATGCCGGAAATGACTGGTTATGATTTATTGAGGAAAGTTAAAGGATCATCTTATTTGAAGGATATTCCAGTTATAATTATGTCATCGGAAAATGTTCCATCAAGGATTAATAGATGTTTAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E206025" ref_strand="+" ref_description="SGN-E206025 [cLEC-20-H21]">
      <seq>aaattcgtaaattttctttttcttcttacaatcaaacaatggatactcaatttcatgttttagctgttgatgacagtattattgatagaaaactcattgaaagacttctcaaaacttcatcttatcaagttactgttgttgattctggaagtaaagctttggagttgcttgaagtaagagaaacgggagtgaatttgataattacagattatagtatgccggaaatgactggttatgatttattgaggaaagttaaaggatcatcttatttgaaggatattccagttataattatgtcatcggaaaatgttccatcaaggattaatatatgtttagaagaaggagctgaagagttttttctgaagccagttcaacaatcagatgttaacagaattaagcctcatttaatgagggagaaacctaattctctaaagagaaaagctatggttgaatgcatttcacctgacagaaccagaaaatacagcagcaacaacaacaacagtttatgtagcatctttttgcagaacatttgtgagtgaaggggaaattgtttcagacaaacatattcagtgtaatctctcgctcgcaattgagatctcagatctgagatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="88787" stop="90061"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89087" g_stop="89196" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="129" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89197" i_stop="89279" i_length="83">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89280" g_stop="89761" g_length="482"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="611" r_length="482" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E206025" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>592</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E206025" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89087" e_stop="89196"/>
          <exon e_start="89280" e_stop="89761"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCTTACAATCAAACAATGGATACTCAATTTCATGTTTTAGCTGTTGATGACAGTATTATTGATAGAAAACTCATTGAAAGACTTCTCAAAACTTCATCTTATCAAGGTAATTAAGTGAATTCAAAATTCTTTTTTCAACGAAAATCATCTGTTTTTTTTTTTCTAATATGTTTATTTTTTAATTAACAGTTACTGTTGTTGATTCTGGAAGTAAAGCTTTGGAGTTGCTTGAAGTAAGAGAAACGGGAGTGAATTTGATAATTACAGATTATAGTATGCCGGAAATGACTGGTTATGATTTATTGAGGAAAGTTAAAGGATCATCTTATTTGAAGGATATTCCAGTTATAATTATGTCATCGGAAAATGTTCCATCAAGGATTAATAGATGTTTAGAAGAAGGAGCTGAAGAGTTTTTTCTGAAGCCAGTTCAACAATCAGATGTTAACAGAATTAAGCCTCATTTAATGAGGGAGAAACCTAATTCTCTAAAGAGAAAAGCTATGGTTGAATGCATTTCACCTGACAGAACCAGAAAATACAGCAGCAACAACAACAACAGTTTATGTAGCATCTTTTTGCAGAACATTTGTGAGTGAAGGGGAAATTGTTTCAGAGAAACATATTCAGTGTAATCTCTCGCTCGCAATTGAGATCTCAGATCTGAGATC</genome_strand>
        <mrna_strand>TTCTTCTTACAATCAAACAATGGATACTCAATTTCATGTTTTAGCTGTTGATGACAGTATTATTGATAGAAAACTCATTGAAAGACTTCTCAAAACTTCATCTTATCAAG...................................................................................TTACTGTTGTTGATTCTGGAAGTAAAGCTTTGGAGTTGCTTGAAGTAAGAGAAACGGGAGTGAATTTGATAATTACAGATTATAGTATGCCGGAAATGACTGGTTATGATTTATTGAGGAAAGTTAAAGGATCATCTTATTTGAAGGATATTCCAGTTATAATTATGTCATCGGAAAATGTTCCATCAAGGATTAATATATGTTTAGAAGAAGGAGCTGAAGAGTTTTTTCTGAAGCCAGTTCAACAATCAGATGTTAACAGAATTAAGCCTCATTTAATGAGGGAGAAACCTAATTCTCTAAAGAGAAAAGCTATGGTTGAATGCATTTCACCTGACAGAACCAGAAAATACAGCAGCAACAACAACAACAGTTTATGTAGCATCTTTTTGCAGAACATTTGTGAGTGAAGGGGAAATTGTTTCAGACAAACATATTCAGTGTAATCTCTCGCTCGCAATTGAGATCTCAGATCTGAGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E703460" ref_strand="+" ref_description="SGN-E703460 [FA21CC05]">
      <seq>attgttgtcgctcttcgttcgacaaatggcacactatttcttgtacgtatgaatcaacccttcactttatactgtcacttctcactctccttcttcaccattattgtctttaactctgatttctcaggcgacccatctctgatttccactttctttatcttcattcgccggcgtataagttaaacagtagaggaattttaaaacaaagatatagaatgatgtccctttctctttctctttcttatcctatacatcgttttgcttcctacaataaacaactatgcgctttgagatctcctcaatctcatcacactaggatttctcagcacaaattgcagcaaagctctagttttcttggatataaccctctcagagtttcaattgatgtaagtggagagatgaatatgaagagacgtggaggagtggtttgttctgctgctgctcttactcctagaaatctacagtgggtctgtactatttcctctgtggttctcatgcttgcgaagggcactgctattcacaagtcttttcttgttcctttatttgctttacaagctcctactgcagttgtctcgtggatccagggtgaatatggcatttggtcagcatttttggcacttcttgttcgtctcttcttctcctttcctggtgaacttgaattgccatttatagcattattgatggtaattgtggctccttatcaagttgcaaatctaagggggacaaaggaaggtgtcattctttccttggctatagcagcttatctgggtttccagcatttcacacgtgctggcagcttgcagaaggcgtttgatcaaggttcaattattgccaccctagccatcatttgtattcttgctgtgcccatgctgctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="91908" stop="96586"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92208" g_stop="92580" g_length="373"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="373" r_length="373" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92581" i_stop="92721" i_length="141">
            <donor d_prob="0.898" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92722" g_stop="92835" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="487" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92836" i_stop="95201" i_length="2366">
            <donor d_prob="0.201" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95202" g_stop="95297" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="488" r_stop="583" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95298" i_stop="95389" i_length="92">
            <donor d_prob="0.902" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95390" g_stop="95454" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="584" r_stop="648" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="95455" i_stop="95982" i_length="528">
            <donor d_prob="0.910" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="95983" g_stop="96052" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="649" r_stop="718" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="96053" i_stop="96129" i_length="77">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="96130" g_stop="96286" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="719" r_stop="875" r_length="157" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E703460" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>875</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E703460" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92208" e_stop="92580"/>
          <exon e_start="92722" e_stop="92835"/>
          <exon e_start="95202" e_stop="95297"/>
          <exon e_start="95390" e_stop="95454"/>
          <exon e_start="95983" e_stop="96052"/>
          <exon e_start="96130" e_stop="96286"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGTTGTCGCTCTTCGTTCGACAAATGGCACACTATTTCTTGTACGTATGAATCAACCCTTCACTTTATACTGTCACTTCTCACTCTCCTTCTTCACCATTATTGTCTTTAACTCTGATTTCTCAGGCGACCCATCTCTGATTTCCACTTTCTTTATCTTCATTCGCCGGCGTATAAGTTAAACAGTAGAGGAATTTTAAAACAAAGATATAGAATGATGTCCCTTTCTCTTTCTCTTTCTTATCCTATACATCGTTTTGCTTCCTACAATAAACAACTATGCGCTTTGAGATCTCCTCAATCTCATCACACTAGGATTTCTCAGCACAAATTGCAGCAAAGCTCTAGTTTTCTTGGATATAACCCTCTCAGGTTTGTTGTTTGATTGATTTGGATATATGAACCTCATTTCAAATTTGGTCTATCAAAATCCCATTTTTGCACGTGTTTTGGGGCGTATTTCCCTAATTTTTTTATCTTATCCTCATGGGGTTTTGATTGTTTCTTTTACAGAGTTTCAATTGATGTAAGTGGAGAGATGAATATGAAGAGACGTGGAGGAGTGGTTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGTGTAAGTCTCCCTTACTCATTCGCGCGCTTACAGGAGTTGGTGCTAAGTTTGCTGGTAAAATGGGACATCTAAAGAATTGATTTTTCATTTTCATTTTGACCATGTGAAATTAGAAGTGGTATAAATCTAGTATTGACTCTCAATAACGTCGTATGAATCTTTTTTAGTACTTTTTTTTTTTTGGAATATGATGGGAGTGTCTTCGGTGAAAGGCAAAATTTGGGAAGCAAAGTTGAGATAGTTTGGGCTCGTGATGAATAGATGCAGGGATAGCAAGTGCGGATGTGTGAGCGGTTGTCTGGATTGATCTGTGAGAGGTAGAAGTAGACCAACAAAGTATTGGAGAGAGATGATTAGATACGACATGACATAGTTGGAGTTCACCGAGGACATGATCTTAGATAGTAAGGTGTGGACGACACGGATTAGGGTAGAATGGTAGTAGGTAGGAGTGTATGGACTTATTGTCCATACTACTCGTCGTAGTATTACTCCTGTTTCTTGTTCTTCAATTTCTGTTATTATATGTTGTTCCGTGTAGTTTGATTATAACATTATTTTGTTGTAGTATTGTTCTGCTACAACCTGTGTTATATTACTGTCTGTTGTTCCTTTTATTTCCATTACTTCTTTTTTTTCTAGACTGTTTTTATCTTGACACCGGGTCTATTGGAAACAATCGCTCTACCTCTGAGGTAGAGATTAGGTCTGGTTACGCTCTACCCTCCACTAAAATTTGTGTGACTACACTAGGTATGTTGTTGTTGAGACGTTGAGTGGAACTCTAAGTTCACTTAGGAAAATACCTTATTAGAGTTCCAGCACCAAGGAGAACCTTGTAGACAAAATAAATATACAAATTTTAACCCATATTTTAAAGTTGTAGGGAGCATATGAAGTCCACCAAAGCATTAACATTATTCAAACTACACCAAACATCAAGATGCATAATGTGATTAACAAGAGAAACTCCCTCAAAACACCTCCAGTTCCTTTCCCTCAATAAGGGCCAATATAATCCATTATGGAATGTAACAAACCTTTCGCAGAGAGTTCTGTGGCTCTCTTCCTGTTAACTACAATATGTATCTCTAAAGAATTCGGCATTACCATTGATCCCAGGTAAATTTACAAAACATATTCTGTATGTCAGTACTCATCTCTGAGTGTAGGAAAAGGAGATTCTGTCCTACATATCCTTCTCTCACAGTTGTTACCTATTTTTCAAATCCGTTTCCCTCTTCTCAGGTGTGATACATGCTTCATTTGTGCTGTACAAAATACTTCTAGAGGAACCTTATGTTTTCAAATTAGTTGTCAAGACTCTTTCCTCTGGTTTATATATAGTAACACCCGTATAGAATAAACCCCTTTTGTGTGTCACTTACTCTTCCTTTTCAATTATCCTGTTTTCTTAGTTCAGTTGTCAGCAACAAGTTAGCCTCTCCAATTTCCAGTCTTGACTCTCCTATTGATGTTATCTCCACCTATTATTTTCTAGACAATAGGTAATTGTGCATTAGATCGTGATTTGAAACTGGATAAGTTATGACATACCTGTAATTCCTACCAAAATTTGATCTTCACACCATTTCCCAATTCAACTTAAACATGTTGCCTCTGGATTCTTCTCACTGGTTTCTAATATGCACTGATGATCATGTAGATAATATTTCCATCCATATGATTTTAGTTCTATTTGGTCTCCTTTAGCCCCTTCAATAATCTCATGATGACACATGTTGACCTGTGCAGGATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATTTAGAAGCATCAACCAGGAGAGAGCATTGGCCCTTGCCATTGACACATTAGCTTTGTGTGCTTCACACTCTATCGTTAAGGCTTGAGTTAACCCAACACTGTACAGATAGAAAAGATAAAAAGAGAGGGACATGTGCAGAAGTCTTTCTTTATAGATTGTACACTTGTTCCTGTCACGTAACATTAGTCAATAATATTTTTAGAGATTTACTGTTTGCTTTCTCTTTTTTCTCGAGTATGACTGCACATTAATTTCTTTGGTACAAGTGTATTGAATCTTAGAAGATTCAAAGTCAGTGCCCCTTGTTTTATAAGTCTTGTATAATTTCCGGCGAATAAACTATCTTTTTTTCTTTTAAAGTAAACCTTGTTCTGCATGCTGTGCCATGATTTGTATACTGCAATCTGACAGTCAAATGGTTATTTTTAGGGTTCTCATGCTTGCGAAGGGCACTGCTATTCACAAGTCTTTTCTTGTTCCTTTATTTGCTTTACAAGCTCCTACTGCAGTTGTCTCGTGGATCCAGTAAGTTTATTAGCATCTGTTAAGTAGCTTGTGCTTACTTCATTAAGCTGAATGTTTTGCAGTACAGCAAACTGACGAGAAATAACTTTCAGGGGTGAATATGGCATTTGGTCAGCATTTTTGGCACTTCTTGTTCGTCTCTTCTTCTCCTTTCCTGGTTGGTTCCTTTATCATGTCTATGGTTTAAACCTCAAATCTTGAAATTGACAACCTTGTCTTTTGCTTCTGTATTTTGTATGTTGTTGGATAGCATTATGTATTTTGTATGTTGTTGGATAGCATTATCCACCCAATATTCCCTCGGGAAGCAGGCTATTAAATTGTACCCAATATTTTCCTGGTTCTATTTTAAGGTGAAAATCTCAGCCCATTTCTGGGTAGGAAGTAAGAGAATATGCCCAACTTTTGTATGTTTACAACCCTTAGTGAGTTTAACATTCTAAAGTCATAATAGGAAGCAGAATATGTATTCATGCTGCTTAGCAGAAGATTGTGAATGGACATTGAAACTTGAAAGTTTGACCCTGTTCTATGTTATCAAAAGATGATAAGGAGATCATTTTCTAAGGTTGTTGTCAAGATTTTAGCTACTCATTTTCTTTGGACGCTGTTATGTTTGCTACTACATTCAATCATTTAGATGATTGTCTTTGAAATATCTGACTGCGGTCTTGATCATTTGTAGGTGAACTTGAATTGCCATTTATAGCATTATTGATGGTAATTGTGGCTCCTTATCAAGTTGCAAATCTAAGGTTGGTATATCCTTCTCTATAAATGTCACTTGGTCTGATAGAGTAGAGTTATATCTGGTTAGTATTGTTCTTGGCAGGGGGACAAAGGAAGGTGTCATTCTTTCCTTGGCTATAGCAGCTTATCTGGGTTTCCAGCATTTCACACGTGCTGGCAGCTTGCAGAAGGCGTTTGATCAAGGTTCAATTATTGCCACCCTAGCCATCATTTGTATTCTTGCTGTG-CCATGCTTGCTC</genome_strand>
        <mrna_strand>ATTGTTGTCGCTCTTCGTTCGACAAATGGCACACTATTTCTTGTACGTATGAATCAACCCTTCACTTTATACTGTCACTTCTCACTCTCCTTCTTCACCATTATTGTCTTTAACTCTGATTTCTCAGGCGACCCATCTCTGATTTCCACTTTCTTTATCTTCATTCGCCGGCGTATAAGTTAAACAGTAGAGGAATTTTAAAACAAAGATATAGAATGATGTCCCTTTCTCTTTCTCTTTCTTATCCTATACATCGTTTTGCTTCCTACAATAAACAACTATGCGCTTTGAGATCTCCTCAATCTCATCACACTAGGATTTCTCAGCACAAATTGCAGCAAAGCTCTAGTTTTCTTGGATATAACCCTCTCAG.............................................................................................................................................AGTTTCAATTGATGTAAGTGGAGAGATGAATATGAAGAGACGTGGAGGAGTGGTTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTCTCATGCTTGCGAAGGGCACTGCTATTCACAAGTCTTTTCTTGTTCCTTTATTTGCTTTACAAGCTCCTACTGCAGTTGTCTCGTGGATCCA............................................................................................GGGTGAATATGGCATTTGGTCAGCATTTTTGGCACTTCTTGTTCGTCTCTTCTTCTCCTTTCCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACTTGAATTGCCATTTATAGCATTATTGATGGTAATTGTGGCTCCTTATCAAGTTGCAAATCTAAG.............................................................................GGGGACAAAGGAAGGTGTCATTCTTTCCTTGGCTATAGCAGCTTATCTGGGTTTCCAGCATTTCACACGTGCTGGCAGCTTGCAGAAGGCGTTTGATCAAGGTTCAATTATTGCCACCCTAGCCATCATTTGTATTCTTGCTGTGCCCATGC-TGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E291038" ref_strand="+" ref_description="SGN-E291038 [cLET-8-C5]">
      <seq>gttgtcgctcttcgttcgacaaatggcacactatttcttagtttcaattgatgtaagtggagagatgaatatgaagagacgtggaggagtggtttgttctgctgctgctcttactcctagaaatctacagtgggtctgtactatttcctctgtggttctcatgcttgcgaagggcactgctattcacaagtcttttcttgttcctttatttgctttacaagctcctactgcagttgtctcgtggatccagggtgaatatggcatttggtcagcatttttggcacttcttgttcgtctcttcttctcctttcctggtgaacttgaattgccatttatagcattattgatggtaattgtggctccttatcaagttgcaaatctaagggggacaaaggaaggtgtcattctttccttggctatagcagcttatctgggtttccagcatttcacacgtgctggcagcttgcagaaggcgtttgatcaaggttcaattattgccaccctagccatcatttgtattcttgctgtgccatgcttgctcttgatttgatgttaaactacagcgatttctcaaaggagtcctgtaaattatttgagtcatttgagggttggagatcacacaaaataatatctttctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="91911" stop="96685"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92211" g_stop="92249" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92250" i_stop="92721" i_length="472">
            <donor d_prob="0.986" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92722" g_stop="92835" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="153" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92836" i_stop="95201" i_length="2366">
            <donor d_prob="0.201" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95202" g_stop="95297" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="249" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95298" i_stop="95389" i_length="92">
            <donor d_prob="0.902" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95390" g_stop="95454" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="314" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="95455" i_stop="95982" i_length="528">
            <donor d_prob="0.910" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="95983" g_stop="96052" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="315" r_stop="384" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="96053" i_stop="96129" i_length="77">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="96130" g_stop="96385" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="385" r_stop="640" r_length="256" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E291038" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E291038" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92211" e_stop="92249"/>
          <exon e_start="92722" e_stop="92835"/>
          <exon e_start="95202" e_stop="95297"/>
          <exon e_start="95390" e_stop="95454"/>
          <exon e_start="95983" e_stop="96052"/>
          <exon e_start="96130" e_stop="96385"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGTCGCTCTTCGTTCGACAAATGGCACACTATTTCTTGTACGTATGAATCAACCCTTCACTTTATACTGTCACTTCTCACTCTCCTTCTTCACCATTATTGTCTTTAACTCTGATTTCTCAGGCGACCCATCTCTGATTTCCACTTTCTTTATCTTCATTCGCCGGCGTATAAGTTAAACAGTAGAGGAATTTTAAAACAAAGATATAGAATGATGTCCCTTTCTCTTTCTCTTTCTTATCCTATACATCGTTTTGCTTCCTACAATAAACAACTATGCGCTTTGAGATCTCCTCAATCTCATCACACTAGGATTTCTCAGCACAAATTGCAGCAAAGCTCTAGTTTTCTTGGATATAACCCTCTCAGGTTTGTTGTTTGATTGATTTGGATATATGAACCTCATTTCAAATTTGGTCTATCAAAATCCCATTTTTGCACGTGTTTTGGGGCGTATTTCCCTAATTTTTTTATCTTATCCTCATGGGGTTTTGATTGTTTCTTTTACAGAGTTTCAATTGATGTAAGTGGAGAGATGAATATGAAGAGACGTGGAGGAGTGGTTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGTGTAAGTCTCCCTTACTCATTCGCGCGCTTACAGGAGTTGGTGCTAAGTTTGCTGGTAAAATGGGACATCTAAAGAATTGATTTTTCATTTTCATTTTGACCATGTGAAATTAGAAGTGGTATAAATCTAGTATTGACTCTCAATAACGTCGTATGAATCTTTTTTAGTACTTTTTTTTTTTTGGAATATGATGGGAGTGTCTTCGGTGAAAGGCAAAATTTGGGAAGCAAAGTTGAGATAGTTTGGGCTCGTGATGAATAGATGCAGGGATAGCAAGTGCGGATGTGTGAGCGGTTGTCTGGATTGATCTGTGAGAGGTAGAAGTAGACCAACAAAGTATTGGAGAGAGATGATTAGATACGACATGACATAGTTGGAGTTCACCGAGGACATGATCTTAGATAGTAAGGTGTGGACGACACGGATTAGGGTAGAATGGTAGTAGGTAGGAGTGTATGGACTTATTGTCCATACTACTCGTCGTAGTATTACTCCTGTTTCTTGTTCTTCAATTTCTGTTATTATATGTTGTTCCGTGTAGTTTGATTATAACATTATTTTGTTGTAGTATTGTTCTGCTACAACCTGTGTTATATTACTGTCTGTTGTTCCTTTTATTTCCATTACTTCTTTTTTTTCTAGACTGTTTTTATCTTGACACCGGGTCTATTGGAAACAATCGCTCTACCTCTGAGGTAGAGATTAGGTCTGGTTACGCTCTACCCTCCACTAAAATTTGTGTGACTACACTAGGTATGTTGTTGTTGAGACGTTGAGTGGAACTCTAAGTTCACTTAGGAAAATACCTTATTAGAGTTCCAGCACCAAGGAGAACCTTGTAGACAAAATAAATATACAAATTTTAACCCATATTTTAAAGTTGTAGGGAGCATATGAAGTCCACCAAAGCATTAACATTATTCAAACTACACCAAACATCAAGATGCATAATGTGATTAACAAGAGAAACTCCCTCAAAACACCTCCAGTTCCTTTCCCTCAATAAGGGCCAATATAATCCATTATGGAATGTAACAAACCTTTCGCAGAGAGTTCTGTGGCTCTCTTCCTGTTAACTACAATATGTATCTCTAAAGAATTCGGCATTACCATTGATCCCAGGTAAATTTACAAAACATATTCTGTATGTCAGTACTCATCTCTGAGTGTAGGAAAAGGAGATTCTGTCCTACATATCCTTCTCTCACAGTTGTTACCTATTTTTCAAATCCGTTTCCCTCTTCTCAGGTGTGATACATGCTTCATTTGTGCTGTACAAAATACTTCTAGAGGAACCTTATGTTTTCAAATTAGTTGTCAAGACTCTTTCCTCTGGTTTATATATAGTAACACCCGTATAGAATAAACCCCTTTTGTGTGTCACTTACTCTTCCTTTTCAATTATCCTGTTTTCTTAGTTCAGTTGTCAGCAACAAGTTAGCCTCTCCAATTTCCAGTCTTGACTCTCCTATTGATGTTATCTCCACCTATTATTTTCTAGACAATAGGTAATTGTGCATTAGATCGTGATTTGAAACTGGATAAGTTATGACATACCTGTAATTCCTACCAAAATTTGATCTTCACACCATTTCCCAATTCAACTTAAACATGTTGCCTCTGGATTCTTCTCACTGGTTTCTAATATGCACTGATGATCATGTAGATAATATTTCCATCCATATGATTTTAGTTCTATTTGGTCTCCTTTAGCCCCTTCAATAATCTCATGATGACACATGTTGACCTGTGCAGGATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATTTAGAAGCATCAACCAGGAGAGAGCATTGGCCCTTGCCATTGACACATTAGCTTTGTGTGCTTCACACTCTATCGTTAAGGCTTGAGTTAACCCAACACTGTACAGATAGAAAAGATAAAAAGAGAGGGACATGTGCAGAAGTCTTTCTTTATAGATTGTACACTTGTTCCTGTCACGTAACATTAGTCAATAATATTTTTAGAGATTTACTGTTTGCTTTCTCTTTTTTCTCGAGTATGACTGCACATTAATTTCTTTGGTACAAGTGTATTGAATCTTAGAAGATTCAAAGTCAGTGCCCCTTGTTTTATAAGTCTTGTATAATTTCCGGCGAATAAACTATCTTTTTTTCTTTTAAAGTAAACCTTGTTCTGCATGCTGTGCCATGATTTGTATACTGCAATCTGACAGTCAAATGGTTATTTTTAGGGTTCTCATGCTTGCGAAGGGCACTGCTATTCACAAGTCTTTTCTTGTTCCTTTATTTGCTTTACAAGCTCCTACTGCAGTTGTCTCGTGGATCCAGTAAGTTTATTAGCATCTGTTAAGTAGCTTGTGCTTACTTCATTAAGCTGAATGTTTTGCAGTACAGCAAACTGACGAGAAATAACTTTCAGGGGTGAATATGGCATTTGGTCAGCATTTTTGGCACTTCTTGTTCGTCTCTTCTTCTCCTTTCCTGGTTGGTTCCTTTATCATGTCTATGGTTTAAACCTCAAATCTTGAAATTGACAACCTTGTCTTTTGCTTCTGTATTTTGTATGTTGTTGGATAGCATTATGTATTTTGTATGTTGTTGGATAGCATTATCCACCCAATATTCCCTCGGGAAGCAGGCTATTAAATTGTACCCAATATTTTCCTGGTTCTATTTTAAGGTGAAAATCTCAGCCCATTTCTGGGTAGGAAGTAAGAGAATATGCCCAACTTTTGTATGTTTACAACCCTTAGTGAGTTTAACATTCTAAAGTCATAATAGGAAGCAGAATATGTATTCATGCTGCTTAGCAGAAGATTGTGAATGGACATTGAAACTTGAAAGTTTGACCCTGTTCTATGTTATCAAAAGATGATAAGGAGATCATTTTCTAAGGTTGTTGTCAAGATTTTAGCTACTCATTTTCTTTGGACGCTGTTATGTTTGCTACTACATTCAATCATTTAGATGATTGTCTTTGAAATATCTGACTGCGGTCTTGATCATTTGTAGGTGAACTTGAATTGCCATTTATAGCATTATTGATGGTAATTGTGGCTCCTTATCAAGTTGCAAATCTAAGGTTGGTATATCCTTCTCTATAAATGTCACTTGGTCTGATAGAGTAGAGTTATATCTGGTTAGTATTGTTCTTGGCAGGGGGACAAAGGAAGGTGTCATTCTTTCCTTGGCTATAGCAGCTTATCTGGGTTTCCAGCATTTCACACGTGCTGGCAGCTTGCAGAAGGCGTTTGATCAAGGTTCAATTATTGCCACCCTAGCCATCATTTGTATTCTTGCTGTGCCATGCTTGCTCTTGATTTGATGTTAAACTACAGCGATTTCTCAAAGGAGTCCTGTAAATTATTTGAGTCATTTGAGGGTTGGAGATCACACAAATAAATATCTTTCTTTT</genome_strand>
        <mrna_strand>GTTGTCGCTCTTCGTTCGACAAATGGCACACTATTTCTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTCAATTGATGTAAGTGGAGAGATGAATATGAAGAGACGTGGAGGAGTGGTTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTCTCATGCTTGCGAAGGGCACTGCTATTCACAAGTCTTTTCTTGTTCCTTTATTTGCTTTACAAGCTCCTACTGCAGTTGTCTCGTGGATCCA............................................................................................GGGTGAATATGGCATTTGGTCAGCATTTTTGGCACTTCTTGTTCGTCTCTTCTTCTCCTTTCCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACTTGAATTGCCATTTATAGCATTATTGATGGTAATTGTGGCTCCTTATCAAGTTGCAAATCTAAG.............................................................................GGGGACAAAGGAAGGTGTCATTCTTTCCTTGGCTATAGCAGCTTATCTGGGTTTCCAGCATTTCACACGTGCTGGCAGCTTGCAGAAGGCGTTTGATCAAGGTTCAATTATTGCCACCCTAGCCATCATTTGTATTCTTGCTGTGCCATGCTTGCTCTTGATTTGATGTTAAACTACAGCGATTTCTCAAAGGAGTCCTGTAAATTATTTGAGTCATTTGAGGGTTGGAGATCACACAAAATAATATCTTTCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E206974" ref_strand="+" ref_description="SGN-E206974 [cLEC-33-I20]">
      <seq>ctcactctccttcttcaccattattgtctttaactctgatttctcaggcgacccatctctgatttccactttctttatcttcattcgccggcgtataagttaaacagttgaggaattttaaaacaaagatatagaatgatgtccctttctctttctctttcttatcctatacatcgttttgcttcctacaataaacaactatgcgctttgagatctcctcaatctcatcacactaggatttctcagcacaaattgcagcaaagctctagttttcttggatataaccctcttagagtttcaattgatgtaagtggagagatgaatatgaagagacgtggaggagtggtttgttctgctgctgctcttactcctagaaatctacagtgggtctgtactatttcctctgtggttctcatgcttgcgaagggcactgctattcacaagtcttttcttgttcctttatttgctttacaagctcctactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="91988" stop="95578"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92288" g_stop="92580" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="293" r_length="293" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92581" i_stop="92721" i_length="141">
            <donor d_prob="0.898" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92722" g_stop="92835" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="407" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92836" i_stop="95201" i_length="2366">
            <donor d_prob="0.201" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95202" g_stop="95278" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="484" r_length="77" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E206974" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E206974" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92288" e_stop="92580"/>
          <exon e_start="92722" e_stop="92835"/>
          <exon e_start="95202" e_stop="95278"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCACTCTCCTTCTTCACCATTATTGTCTTTAACTCTGATTTCTCAGGCGACCCATCTCTGATTTCCACTTTCTTTATCTTCATTCGCCGGCGTATAAGTTAAACAGTAGAGGAATTTTAAAACAAAGATATAGAATGATGTCCCTTTCTCTTTCTCTTTCTTATCCTATACATCGTTTTGCTTCCTACAATAAACAACTATGCGCTTTGAGATCTCCTCAATCTCATCACACTAGGATTTCTCAGCACAAATTGCAGCAAAGCTCTAGTTTTCTTGGATATAACCCTCTCAGGTTTGTTGTTTGATTGATTTGGATATATGAACCTCATTTCAAATTTGGTCTATCAAAATCCCATTTTTGCACGTGTTTTGGGGCGTATTTCCCTAATTTTTTTATCTTATCCTCATGGGGTTTTGATTGTTTCTTTTACAGAGTTTCAATTGATGTAAGTGGAGAGATGAATATGAAGAGACGTGGAGGAGTGGTTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGTGTAAGTCTCCCTTACTCATTCGCGCGCTTACAGGAGTTGGTGCTAAGTTTGCTGGTAAAATGGGACATCTAAAGAATTGATTTTTCATTTTCATTTTGACCATGTGAAATTAGAAGTGGTATAAATCTAGTATTGACTCTCAATAACGTCGTATGAATCTTTTTTAGTACTTTTTTTTTTTTGGAATATGATGGGAGTGTCTTCGGTGAAAGGCAAAATTTGGGAAGCAAAGTTGAGATAGTTTGGGCTCGTGATGAATAGATGCAGGGATAGCAAGTGCGGATGTGTGAGCGGTTGTCTGGATTGATCTGTGAGAGGTAGAAGTAGACCAACAAAGTATTGGAGAGAGATGATTAGATACGACATGACATAGTTGGAGTTCACCGAGGACATGATCTTAGATAGTAAGGTGTGGACGACACGGATTAGGGTAGAATGGTAGTAGGTAGGAGTGTATGGACTTATTGTCCATACTACTCGTCGTAGTATTACTCCTGTTTCTTGTTCTTCAATTTCTGTTATTATATGTTGTTCCGTGTAGTTTGATTATAACATTATTTTGTTGTAGTATTGTTCTGCTACAACCTGTGTTATATTACTGTCTGTTGTTCCTTTTATTTCCATTACTTCTTTTTTTTCTAGACTGTTTTTATCTTGACACCGGGTCTATTGGAAACAATCGCTCTACCTCTGAGGTAGAGATTAGGTCTGGTTACGCTCTACCCTCCACTAAAATTTGTGTGACTACACTAGGTATGTTGTTGTTGAGACGTTGAGTGGAACTCTAAGTTCACTTAGGAAAATACCTTATTAGAGTTCCAGCACCAAGGAGAACCTTGTAGACAAAATAAATATACAAATTTTAACCCATATTTTAAAGTTGTAGGGAGCATATGAAGTCCACCAAAGCATTAACATTATTCAAACTACACCAAACATCAAGATGCATAATGTGATTAACAAGAGAAACTCCCTCAAAACACCTCCAGTTCCTTTCCCTCAATAAGGGCCAATATAATCCATTATGGAATGTAACAAACCTTTCGCAGAGAGTTCTGTGGCTCTCTTCCTGTTAACTACAATATGTATCTCTAAAGAATTCGGCATTACCATTGATCCCAGGTAAATTTACAAAACATATTCTGTATGTCAGTACTCATCTCTGAGTGTAGGAAAAGGAGATTCTGTCCTACATATCCTTCTCTCACAGTTGTTACCTATTTTTCAAATCCGTTTCCCTCTTCTCAGGTGTGATACATGCTTCATTTGTGCTGTACAAAATACTTCTAGAGGAACCTTATGTTTTCAAATTAGTTGTCAAGACTCTTTCCTCTGGTTTATATATAGTAACACCCGTATAGAATAAACCCCTTTTGTGTGTCACTTACTCTTCCTTTTCAATTATCCTGTTTTCTTAGTTCAGTTGTCAGCAACAAGTTAGCCTCTCCAATTTCCAGTCTTGACTCTCCTATTGATGTTATCTCCACCTATTATTTTCTAGACAATAGGTAATTGTGCATTAGATCGTGATTTGAAACTGGATAAGTTATGACATACCTGTAATTCCTACCAAAATTTGATCTTCACACCATTTCCCAATTCAACTTAAACATGTTGCCTCTGGATTCTTCTCACTGGTTTCTAATATGCACTGATGATCATGTAGATAATATTTCCATCCATATGATTTTAGTTCTATTTGGTCTCCTTTAGCCCCTTCAATAATCTCATGATGACACATGTTGACCTGTGCAGGATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATTTAGAAGCATCAACCAGGAGAGAGCATTGGCCCTTGCCATTGACACATTAGCTTTGTGTGCTTCACACTCTATCGTTAAGGCTTGAGTTAACCCAACACTGTACAGATAGAAAAGATAAAAAGAGAGGGACATGTGCAGAAGTCTTTCTTTATAGATTGTACACTTGTTCCTGTCACGTAACATTAGTCAATAATATTTTTAGAGATTTACTGTTTGCTTTCTCTTTTTTCTCGAGTATGACTGCACATTAATTTCTTTGGTACAAGTGTATTGAATCTTAGAAGATTCAAAGTCAGTGCCCCTTGTTTTATAAGTCTTGTATAATTTCCGGCGAATAAACTATCTTTTTTTCTTTTAAAGTAAACCTTGTTCTGCATGCTGTGCCATGATTTGTATACTGCAATCTGACAGTCAAATGGTTATTTTTAGGGTTCTCATGCTTGCGAAGGGCACTGCTATTCACAAGTCTTTTCTTGTTCCTTTATTTGCTTTACAAGCTCCTACTG</genome_strand>
        <mrna_strand>CTCACTCTCCTTCTTCACCATTATTGTCTTTAACTCTGATTTCTCAGGCGACCCATCTCTGATTTCCACTTTCTTTATCTTCATTCGCCGGCGTATAAGTTAAACAGTTGAGGAATTTTAAAACAAAGATATAGAATGATGTCCCTTTCTCTTTCTCTTTCTTATCCTATACATCGTTTTGCTTCCTACAATAAACAACTATGCGCTTTGAGATCTCCTCAATCTCATCACACTAGGATTTCTCAGCACAAATTGCAGCAAAGCTCTAGTTTTCTTGGATATAACCCTCTTAG.............................................................................................................................................AGTTTCAATTGATGTAAGTGGAGAGATGAATATGAAGAGACGTGGAGGAGTGGTTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTCTCATGCTTGCGAAGGGCACTGCTATTCACAAGTCTTTTCTTGTTCCTTTATTTGCTTTACAAGCTCCTACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E391647" ref_strand="+" ref_description="SGN-E391647 [TUS-24-K11]">
      <seq>ctgatttctcaggcgacccatctctgatttccactttctttatcttcattcgccggcgtataagttaaacagttgaggaattttaaaacaaagatatagaatgatgtccctttctctttctctttcttatcctatacatcgttttgcttcctacaataaacaactatgcgctttgagatctcctcaatctcatcacactatgatttctcagcacaaattgcagcaaagctctagttttcttggataaccctcttagagtttcaattgatgtaagtggagagatgaatatgaagagacgtggaggagtggtttgttctgctgctgctcttactcctagaaatctacagtgggtctgtactatttcctctgtggttctcatgcttgcgaagggcactgctattcacaagtcttttcttgttcggggggggggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="92023" stop="95551"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92323" g_stop="92580" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="256" r_length="256" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92581" i_stop="92721" i_length="141">
            <donor d_prob="0.898" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92722" g_stop="92835" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="370" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92836" i_stop="95201" i_length="2366">
            <donor d_prob="0.201" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95202" g_stop="95247" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="371" r_stop="416" r_length="46" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E391647" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>418</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E391647" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92323" e_stop="92580"/>
          <exon e_start="92722" e_stop="92835"/>
          <exon e_start="95202" e_stop="95247"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGATTTCTCAGGCGACCCATCTCTGATTTCCACTTTCTTTATCTTCATTCGCCGGCGTATAAGTTAAACAGTAGAGGAATTTTAAAACAAAGATATAGAATGATGTCCCTTTCTCTTTCTCTTTCTTATCCTATACATCGTTTTGCTTCCTACAATAAACAACTATGCGCTTTGAGATCTCCTCAATCTCATCACACTAGGATTTCTCAGCACAAATTGCAGCAAAGCTCTAGTTTTCTTGGATATAACCCTCTCAGGTTTGTTGTTTGATTGATTTGGATATATGAACCTCATTTCAAATTTGGTCTATCAAAATCCCATTTTTGCACGTGTTTTGGGGCGTATTTCCCTAATTTTTTTATCTTATCCTCATGGGGTTTTGATTGTTTCTTTTACAGAGTTTCAATTGATGTAAGTGGAGAGATGAATATGAAGAGACGTGGAGGAGTGGTTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGTGTAAGTCTCCCTTACTCATTCGCGCGCTTACAGGAGTTGGTGCTAAGTTTGCTGGTAAAATGGGACATCTAAAGAATTGATTTTTCATTTTCATTTTGACCATGTGAAATTAGAAGTGGTATAAATCTAGTATTGACTCTCAATAACGTCGTATGAATCTTTTTTAGTACTTTTTTTTTTTTGGAATATGATGGGAGTGTCTTCGGTGAAAGGCAAAATTTGGGAAGCAAAGTTGAGATAGTTTGGGCTCGTGATGAATAGATGCAGGGATAGCAAGTGCGGATGTGTGAGCGGTTGTCTGGATTGATCTGTGAGAGGTAGAAGTAGACCAACAAAGTATTGGAGAGAGATGATTAGATACGACATGACATAGTTGGAGTTCACCGAGGACATGATCTTAGATAGTAAGGTGTGGACGACACGGATTAGGGTAGAATGGTAGTAGGTAGGAGTGTATGGACTTATTGTCCATACTACTCGTCGTAGTATTACTCCTGTTTCTTGTTCTTCAATTTCTGTTATTATATGTTGTTCCGTGTAGTTTGATTATAACATTATTTTGTTGTAGTATTGTTCTGCTACAACCTGTGTTATATTACTGTCTGTTGTTCCTTTTATTTCCATTACTTCTTTTTTTTCTAGACTGTTTTTATCTTGACACCGGGTCTATTGGAAACAATCGCTCTACCTCTGAGGTAGAGATTAGGTCTGGTTACGCTCTACCCTCCACTAAAATTTGTGTGACTACACTAGGTATGTTGTTGTTGAGACGTTGAGTGGAACTCTAAGTTCACTTAGGAAAATACCTTATTAGAGTTCCAGCACCAAGGAGAACCTTGTAGACAAAATAAATATACAAATTTTAACCCATATTTTAAAGTTGTAGGGAGCATATGAAGTCCACCAAAGCATTAACATTATTCAAACTACACCAAACATCAAGATGCATAATGTGATTAACAAGAGAAACTCCCTCAAAACACCTCCAGTTCCTTTCCCTCAATAAGGGCCAATATAATCCATTATGGAATGTAACAAACCTTTCGCAGAGAGTTCTGTGGCTCTCTTCCTGTTAACTACAATATGTATCTCTAAAGAATTCGGCATTACCATTGATCCCAGGTAAATTTACAAAACATATTCTGTATGTCAGTACTCATCTCTGAGTGTAGGAAAAGGAGATTCTGTCCTACATATCCTTCTCTCACAGTTGTTACCTATTTTTCAAATCCGTTTCCCTCTTCTCAGGTGTGATACATGCTTCATTTGTGCTGTACAAAATACTTCTAGAGGAACCTTATGTTTTCAAATTAGTTGTCAAGACTCTTTCCTCTGGTTTATATATAGTAACACCCGTATAGAATAAACCCCTTTTGTGTGTCACTTACTCTTCCTTTTCAATTATCCTGTTTTCTTAGTTCAGTTGTCAGCAACAAGTTAGCCTCTCCAATTTCCAGTCTTGACTCTCCTATTGATGTTATCTCCACCTATTATTTTCTAGACAATAGGTAATTGTGCATTAGATCGTGATTTGAAACTGGATAAGTTATGACATACCTGTAATTCCTACCAAAATTTGATCTTCACACCATTTCCCAATTCAACTTAAACATGTTGCCTCTGGATTCTTCTCACTGGTTTCTAATATGCACTGATGATCATGTAGATAATATTTCCATCCATATGATTTTAGTTCTATTTGGTCTCCTTTAGCCCCTTCAATAATCTCATGATGACACATGTTGACCTGTGCAGGATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATTTAGAAGCATCAACCAGGAGAGAGCATTGGCCCTTGCCATTGACACATTAGCTTTGTGTGCTTCACACTCTATCGTTAAGGCTTGAGTTAACCCAACACTGTACAGATAGAAAAGATAAAAAGAGAGGGACATGTGCAGAAGTCTTTCTTTATAGATTGTACACTTGTTCCTGTCACGTAACATTAGTCAATAATATTTTTAGAGATTTACTGTTTGCTTTCTCTTTTTTCTCGAGTATGACTGCACATTAATTTCTTTGGTACAAGTGTATTGAATCTTAGAAGATTCAAAGTCAGTGCCCCTTGTTTTATAAGTCTTGTATAATTTCCGGCGAATAAACTATCTTTTTTTCTTTTAAAGTAAACCTTGTTCTGCATGCTGTGCCATGATTTGTATACTGCAATCTGACAGTCAAATGGTTATTTTTAGGGTTCTCATGCTTGCGAAGGGCACTGCTATTCACAAGTCTTTTCTT</genome_strand>
        <mrna_strand>CTGATTTCTCAGGCGACCCATCTCTGATTTCCACTTTCTTTATCTTCATTCGCCGGCGTATAAGTTAAACAGTTGAGGAATTTTAAAACAAAGATATAGAATGATGTCCCTTTCTCTTTCTCTTTCTTATCCTATACATCGTTTTGCTTCCTACAATAAACAACTATGCGCTTTGAGATCTCCTCAATCTCATCACACTATGATTTCTCAGCACAAATTGCAGCAAAGCTCTAGTTTTCTTGG--ATAACCCTCTTAG.............................................................................................................................................AGTTTCAATTGATGTAAGTGGAGAGATGAATATGAAGAGACGTGGAGGAGTGGTTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTCTCATGCTTGCGAAGGGCACTGCTATTCACAAGTCTTTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E246672" ref_strand="+" ref_description="SGN-E246672 [cLEF-45-C22]">
      <seq>tgatttctcaggcgacccatctctgatttccactttctttatctggattcgccggcgtataagttaaacagttgaggaattttaaaacaaagatatagaatgatgtccctttctctttctctttcttatcctatacatcgttttgcttcctacaataaacaactatgcgctttgagatctcctcaatctcatcacactatgatttctcagcacaaattgcagcaaagctctagttttcttggataaccctcttagagtttcaattgatgtaagtggagagatgaatatgaagagacgtggaggagtggtttgttctgctgctgctcttactcctagaaatctacagtgggtctgtactatttcctctgtggttctcatgcttgcgaagggcactgctattcacaagtcttttcttgttcctttatttgctttacaagctcctactgcagttgtctcgtggatccagggtgaatatggcatttggtcagcatttttggcacttcttgttcgtctcttcttctcctttcctggtgaacttgaattgccatttatagcattattgatggtaattgtggctccttatcaagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="92024" stop="96341"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92324" g_stop="92580" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="255" r_length="255" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92581" i_stop="92721" i_length="141">
            <donor d_prob="0.898" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92722" g_stop="92835" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="256" r_stop="369" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92836" i_stop="95201" i_length="2366">
            <donor d_prob="0.201" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95202" g_stop="95297" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="370" r_stop="465" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95298" i_stop="95389" i_length="92">
            <donor d_prob="0.902" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95390" g_stop="95454" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="530" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="95455" i_stop="95982" i_length="528">
            <donor d_prob="0.910" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="95983" g_stop="96041" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="531" r_stop="589" r_length="59" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E246672" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E246672" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92324" e_stop="92580"/>
          <exon e_start="92722" e_stop="92835"/>
          <exon e_start="95202" e_stop="95297"/>
          <exon e_start="95390" e_stop="95454"/>
          <exon e_start="95983" e_stop="96041"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTTCTCAGGCGACCCATCTCTGATTTCCACTTTCTTTATCTTCATTCGCCGGCGTATAAGTTAAACAGTAGAGGAATTTTAAAACAAAGATATAGAATGATGTCCCTTTCTCTTTCTCTTTCTTATCCTATACATCGTTTTGCTTCCTACAATAAACAACTATGCGCTTTGAGATCTCCTCAATCTCATCACACTAGGATTTCTCAGCACAAATTGCAGCAAAGCTCTAGTTTTCTTGGATATAACCCTCTCAGGTTTGTTGTTTGATTGATTTGGATATATGAACCTCATTTCAAATTTGGTCTATCAAAATCCCATTTTTGCACGTGTTTTGGGGCGTATTTCCCTAATTTTTTTATCTTATCCTCATGGGGTTTTGATTGTTTCTTTTACAGAGTTTCAATTGATGTAAGTGGAGAGATGAATATGAAGAGACGTGGAGGAGTGGTTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGTGTAAGTCTCCCTTACTCATTCGCGCGCTTACAGGAGTTGGTGCTAAGTTTGCTGGTAAAATGGGACATCTAAAGAATTGATTTTTCATTTTCATTTTGACCATGTGAAATTAGAAGTGGTATAAATCTAGTATTGACTCTCAATAACGTCGTATGAATCTTTTTTAGTACTTTTTTTTTTTTGGAATATGATGGGAGTGTCTTCGGTGAAAGGCAAAATTTGGGAAGCAAAGTTGAGATAGTTTGGGCTCGTGATGAATAGATGCAGGGATAGCAAGTGCGGATGTGTGAGCGGTTGTCTGGATTGATCTGTGAGAGGTAGAAGTAGACCAACAAAGTATTGGAGAGAGATGATTAGATACGACATGACATAGTTGGAGTTCACCGAGGACATGATCTTAGATAGTAAGGTGTGGACGACACGGATTAGGGTAGAATGGTAGTAGGTAGGAGTGTATGGACTTATTGTCCATACTACTCGTCGTAGTATTACTCCTGTTTCTTGTTCTTCAATTTCTGTTATTATATGTTGTTCCGTGTAGTTTGATTATAACATTATTTTGTTGTAGTATTGTTCTGCTACAACCTGTGTTATATTACTGTCTGTTGTTCCTTTTATTTCCATTACTTCTTTTTTTTCTAGACTGTTTTTATCTTGACACCGGGTCTATTGGAAACAATCGCTCTACCTCTGAGGTAGAGATTAGGTCTGGTTACGCTCTACCCTCCACTAAAATTTGTGTGACTACACTAGGTATGTTGTTGTTGAGACGTTGAGTGGAACTCTAAGTTCACTTAGGAAAATACCTTATTAGAGTTCCAGCACCAAGGAGAACCTTGTAGACAAAATAAATATACAAATTTTAACCCATATTTTAAAGTTGTAGGGAGCATATGAAGTCCACCAAAGCATTAACATTATTCAAACTACACCAAACATCAAGATGCATAATGTGATTAACAAGAGAAACTCCCTCAAAACACCTCCAGTTCCTTTCCCTCAATAAGGGCCAATATAATCCATTATGGAATGTAACAAACCTTTCGCAGAGAGTTCTGTGGCTCTCTTCCTGTTAACTACAATATGTATCTCTAAAGAATTCGGCATTACCATTGATCCCAGGTAAATTTACAAAACATATTCTGTATGTCAGTACTCATCTCTGAGTGTAGGAAAAGGAGATTCTGTCCTACATATCCTTCTCTCACAGTTGTTACCTATTTTTCAAATCCGTTTCCCTCTTCTCAGGTGTGATACATGCTTCATTTGTGCTGTACAAAATACTTCTAGAGGAACCTTATGTTTTCAAATTAGTTGTCAAGACTCTTTCCTCTGGTTTATATATAGTAACACCCGTATAGAATAAACCCCTTTTGTGTGTCACTTACTCTTCCTTTTCAATTATCCTGTTTTCTTAGTTCAGTTGTCAGCAACAAGTTAGCCTCTCCAATTTCCAGTCTTGACTCTCCTATTGATGTTATCTCCACCTATTATTTTCTAGACAATAGGTAATTGTGCATTAGATCGTGATTTGAAACTGGATAAGTTATGACATACCTGTAATTCCTACCAAAATTTGATCTTCACACCATTTCCCAATTCAACTTAAACATGTTGCCTCTGGATTCTTCTCACTGGTTTCTAATATGCACTGATGATCATGTAGATAATATTTCCATCCATATGATTTTAGTTCTATTTGGTCTCCTTTAGCCCCTTCAATAATCTCATGATGACACATGTTGACCTGTGCAGGATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATTTAGAAGCATCAACCAGGAGAGAGCATTGGCCCTTGCCATTGACACATTAGCTTTGTGTGCTTCACACTCTATCGTTAAGGCTTGAGTTAACCCAACACTGTACAGATAGAAAAGATAAAAAGAGAGGGACATGTGCAGAAGTCTTTCTTTATAGATTGTACACTTGTTCCTGTCACGTAACATTAGTCAATAATATTTTTAGAGATTTACTGTTTGCTTTCTCTTTTTTCTCGAGTATGACTGCACATTAATTTCTTTGGTACAAGTGTATTGAATCTTAGAAGATTCAAAGTCAGTGCCCCTTGTTTTATAAGTCTTGTATAATTTCCGGCGAATAAACTATCTTTTTTTCTTTTAAAGTAAACCTTGTTCTGCATGCTGTGCCATGATTTGTATACTGCAATCTGACAGTCAAATGGTTATTTTTAGGGTTCTCATGCTTGCGAAGGGCACTGCTATTCACAAGTCTTTTCTTGTTCCTTTATTTGCTTTACAAGCTCCTACTGCAGTTGTCTCGTGGATCCAGTAAGTTTATTAGCATCTGTTAAGTAGCTTGTGCTTACTTCATTAAGCTGAATGTTTTGCAGTACAGCAAACTGACGAGAAATAACTTTCAGGGGTGAATATGGCATTTGGTCAGCATTTTTGGCACTTCTTGTTCGTCTCTTCTTCTCCTTTCCTGGTTGGTTCCTTTATCATGTCTATGGTTTAAACCTCAAATCTTGAAATTGACAACCTTGTCTTTTGCTTCTGTATTTTGTATGTTGTTGGATAGCATTATGTATTTTGTATGTTGTTGGATAGCATTATCCACCCAATATTCCCTCGGGAAGCAGGCTATTAAATTGTACCCAATATTTTCCTGGTTCTATTTTAAGGTGAAAATCTCAGCCCATTTCTGGGTAGGAAGTAAGAGAATATGCCCAACTTTTGTATGTTTACAACCCTTAGTGAGTTTAACATTCTAAAGTCATAATAGGAAGCAGAATATGTATTCATGCTGCTTAGCAGAAGATTGTGAATGGACATTGAAACTTGAAAGTTTGACCCTGTTCTATGTTATCAAAAGATGATAAGGAGATCATTTTCTAAGGTTGTTGTCAAGATTTTAGCTACTCATTTTCTTTGGACGCTGTTATGTTTGCTACTACATTCAATCATTTAGATGATTGTCTTTGAAATATCTGACTGCGGTCTTGATCATTTGTAGGTGAACTTGAATTGCCATTTATAGCATTATTGATGGTAATTGTGGCTCCTTATCAAGTT</genome_strand>
        <mrna_strand>TGATTTCTCAGGCGACCCATCTCTGATTTCCACTTTCTTTATCTGGATTCGCCGGCGTATAAGTTAAACAGTTGAGGAATTTTAAAACAAAGATATAGAATGATGTCCCTTTCTCTTTCTCTTTCTTATCCTATACATCGTTTTGCTTCCTACAATAAACAACTATGCGCTTTGAGATCTCCTCAATCTCATCACACTATGATTTCTCAGCACAAATTGCAGCAAAGCTCTAGTTTTCTTGG--ATAACCCTCTTAG.............................................................................................................................................AGTTTCAATTGATGTAAGTGGAGAGATGAATATGAAGAGACGTGGAGGAGTGGTTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTCTCATGCTTGCGAAGGGCACTGCTATTCACAAGTCTTTTCTTGTTCCTTTATTTGCTTTACAAGCTCCTACTGCAGTTGTCTCGTGGATCCA............................................................................................GGGTGAATATGGCATTTGGTCAGCATTTTTGGCACTTCTTGTTCGTCTCTTCTTCTCCTTTCCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACTTGAATTGCCATTTATAGCATTATTGATGGTAATTGTGGCTCCTTATCAAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E310222" ref_strand="+" ref_description="SGN-E310222 [cLEZ-8-N8]">
      <seq>tgatttccactttctttatcttcattcgccggcgtataagttaaacagttgaggaattttaaaacaaagatatagaatgatgtccctttctctttctctttcttatcctatacatcgttttgcttcctacaataaacaactatgcgctttgagatctcctcaatctcatcacactaggatttctcagcacaaattgcagcaaagctctagttttcttggatataaccctcttagagtttcaattgatgtaagtggagagatgaatatgaagagacgtggaggagtggtttgttctgctgctgctcttactcctagaaatctacagtggggttctcatgcttgcgaagggcactgctattcacaagtcttttcttgttcctttatttgctttacaagctcctactgcagttgtctcgtggatccagggtgaatatggcatttggtcagcatttttggcacttcttgttcgtctcttcttctcctttcctggtgaacttgaattgccatttatagcattattgatggtaattgtggctccttatcaagttgcaaatctaaaggggacaaaagaaggtgtcattctttccttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="92047" stop="96460"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92347" g_stop="92580" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="234" r_length="234" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92581" i_stop="92721" i_length="141">
            <donor d_prob="0.898" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92722" g_stop="92815" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="328" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92816" i_stop="95201" i_length="2386">
            <donor d_prob="0.664" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95202" g_stop="95297" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="424" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95298" i_stop="95389" i_length="92">
            <donor d_prob="0.902" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95390" g_stop="95454" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="489" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="95455" i_stop="95982" i_length="528">
            <donor d_prob="0.910" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="95983" g_stop="96052" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="559" r_length="70" r_score="0.986"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="96053" i_stop="96129" i_length="77">
            <donor d_prob="0.949" d_score="0.98"/>
            <acceptor a_prob="0.971" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="96130" g_stop="96160" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="560" r_stop="590" r_length="31" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E310222" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>590</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E310222" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92347" e_stop="92580"/>
          <exon e_start="92722" e_stop="92815"/>
          <exon e_start="95202" e_stop="95297"/>
          <exon e_start="95390" e_stop="95454"/>
          <exon e_start="95983" e_stop="96052"/>
          <exon e_start="96130" e_stop="96160"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTTCCACTTTCTTTATCTTCATTCGCCGGCGTATAAGTTAAACAGTAGAGGAATTTTAAAACAAAGATATAGAATGATGTCCCTTTCTCTTTCTCTTTCTTATCCTATACATCGTTTTGCTTCCTACAATAAACAACTATGCGCTTTGAGATCTCCTCAATCTCATCACACTAGGATTTCTCAGCACAAATTGCAGCAAAGCTCTAGTTTTCTTGGATATAACCCTCTCAGGTTTGTTGTTTGATTGATTTGGATATATGAACCTCATTTCAAATTTGGTCTATCAAAATCCCATTTTTGCACGTGTTTTGGGGCGTATTTCCCTAATTTTTTTATCTTATCCTCATGGGGTTTTGATTGTTTCTTTTACAGAGTTTCAATTGATGTAAGTGGAGAGATGAATATGAAGAGACGTGGAGGAGTGGTTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGTGTAAGTCTCCCTTACTCATTCGCGCGCTTACAGGAGTTGGTGCTAAGTTTGCTGGTAAAATGGGACATCTAAAGAATTGATTTTTCATTTTCATTTTGACCATGTGAAATTAGAAGTGGTATAAATCTAGTATTGACTCTCAATAACGTCGTATGAATCTTTTTTAGTACTTTTTTTTTTTTGGAATATGATGGGAGTGTCTTCGGTGAAAGGCAAAATTTGGGAAGCAAAGTTGAGATAGTTTGGGCTCGTGATGAATAGATGCAGGGATAGCAAGTGCGGATGTGTGAGCGGTTGTCTGGATTGATCTGTGAGAGGTAGAAGTAGACCAACAAAGTATTGGAGAGAGATGATTAGATACGACATGACATAGTTGGAGTTCACCGAGGACATGATCTTAGATAGTAAGGTGTGGACGACACGGATTAGGGTAGAATGGTAGTAGGTAGGAGTGTATGGACTTATTGTCCATACTACTCGTCGTAGTATTACTCCTGTTTCTTGTTCTTCAATTTCTGTTATTATATGTTGTTCCGTGTAGTTTGATTATAACATTATTTTGTTGTAGTATTGTTCTGCTACAACCTGTGTTATATTACTGTCTGTTGTTCCTTTTATTTCCATTACTTCTTTTTTTTCTAGACTGTTTTTATCTTGACACCGGGTCTATTGGAAACAATCGCTCTACCTCTGAGGTAGAGATTAGGTCTGGTTACGCTCTACCCTCCACTAAAATTTGTGTGACTACACTAGGTATGTTGTTGTTGAGACGTTGAGTGGAACTCTAAGTTCACTTAGGAAAATACCTTATTAGAGTTCCAGCACCAAGGAGAACCTTGTAGACAAAATAAATATACAAATTTTAACCCATATTTTAAAGTTGTAGGGAGCATATGAAGTCCACCAAAGCATTAACATTATTCAAACTACACCAAACATCAAGATGCATAATGTGATTAACAAGAGAAACTCCCTCAAAACACCTCCAGTTCCTTTCCCTCAATAAGGGCCAATATAATCCATTATGGAATGTAACAAACCTTTCGCAGAGAGTTCTGTGGCTCTCTTCCTGTTAACTACAATATGTATCTCTAAAGAATTCGGCATTACCATTGATCCCAGGTAAATTTACAAAACATATTCTGTATGTCAGTACTCATCTCTGAGTGTAGGAAAAGGAGATTCTGTCCTACATATCCTTCTCTCACAGTTGTTACCTATTTTTCAAATCCGTTTCCCTCTTCTCAGGTGTGATACATGCTTCATTTGTGCTGTACAAAATACTTCTAGAGGAACCTTATGTTTTCAAATTAGTTGTCAAGACTCTTTCCTCTGGTTTATATATAGTAACACCCGTATAGAATAAACCCCTTTTGTGTGTCACTTACTCTTCCTTTTCAATTATCCTGTTTTCTTAGTTCAGTTGTCAGCAACAAGTTAGCCTCTCCAATTTCCAGTCTTGACTCTCCTATTGATGTTATCTCCACCTATTATTTTCTAGACAATAGGTAATTGTGCATTAGATCGTGATTTGAAACTGGATAAGTTATGACATACCTGTAATTCCTACCAAAATTTGATCTTCACACCATTTCCCAATTCAACTTAAACATGTTGCCTCTGGATTCTTCTCACTGGTTTCTAATATGCACTGATGATCATGTAGATAATATTTCCATCCATATGATTTTAGTTCTATTTGGTCTCCTTTAGCCCCTTCAATAATCTCATGATGACACATGTTGACCTGTGCAGGATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATTTAGAAGCATCAACCAGGAGAGAGCATTGGCCCTTGCCATTGACACATTAGCTTTGTGTGCTTCACACTCTATCGTTAAGGCTTGAGTTAACCCAACACTGTACAGATAGAAAAGATAAAAAGAGAGGGACATGTGCAGAAGTCTTTCTTTATAGATTGTACACTTGTTCCTGTCACGTAACATTAGTCAATAATATTTTTAGAGATTTACTGTTTGCTTTCTCTTTTTTCTCGAGTATGACTGCACATTAATTTCTTTGGTACAAGTGTATTGAATCTTAGAAGATTCAAAGTCAGTGCCCCTTGTTTTATAAGTCTTGTATAATTTCCGGCGAATAAACTATCTTTTTTTCTTTTAAAGTAAACCTTGTTCTGCATGCTGTGCCATGATTTGTATACTGCAATCTGACAGTCAAATGGTTATTTTTAGGGTTCTCATGCTTGCGAAGGGCACTGCTATTCACAAGTCTTTTCTTGTTCCTTTATTTGCTTTACAAGCTCCTACTGCAGTTGTCTCGTGGATCCAGTAAGTTTATTAGCATCTGTTAAGTAGCTTGTGCTTACTTCATTAAGCTGAATGTTTTGCAGTACAGCAAACTGACGAGAAATAACTTTCAGGGGTGAATATGGCATTTGGTCAGCATTTTTGGCACTTCTTGTTCGTCTCTTCTTCTCCTTTCCTGGTTGGTTCCTTTATCATGTCTATGGTTTAAACCTCAAATCTTGAAATTGACAACCTTGTCTTTTGCTTCTGTATTTTGTATGTTGTTGGATAGCATTATGTATTTTGTATGTTGTTGGATAGCATTATCCACCCAATATTCCCTCGGGAAGCAGGCTATTAAATTGTACCCAATATTTTCCTGGTTCTATTTTAAGGTGAAAATCTCAGCCCATTTCTGGGTAGGAAGTAAGAGAATATGCCCAACTTTTGTATGTTTACAACCCTTAGTGAGTTTAACATTCTAAAGTCATAATAGGAAGCAGAATATGTATTCATGCTGCTTAGCAGAAGATTGTGAATGGACATTGAAACTTGAAAGTTTGACCCTGTTCTATGTTATCAAAAGATGATAAGGAGATCATTTTCTAAGGTTGTTGTCAAGATTTTAGCTACTCATTTTCTTTGGACGCTGTTATGTTTGCTACTACATTCAATCATTTAGATGATTGTCTTTGAAATATCTGACTGCGGTCTTGATCATTTGTAGGTGAACTTGAATTGCCATTTATAGCATTATTGATGGTAATTGTGGCTCCTTATCAAGTTGCAAATCTAAGGTTGGTATATCCTTCTCTATAAATGTCACTTGGTCTGATAGAGTAGAGTTATATCTGGTTAGTATTGTTCTTGGCAGGGGGACAAAGGAAGGTGTCATTCTTTCCTTG</genome_strand>
        <mrna_strand>TGATTTCCACTTTCTTTATCTTCATTCGCCGGCGTATAAGTTAAACAGTTGAGGAATTTTAAAACAAAGATATAGAATGATGTCCCTTTCTCTTTCTCTTTCTTATCCTATACATCGTTTTGCTTCCTACAATAAACAACTATGCGCTTTGAGATCTCCTCAATCTCATCACACTAGGATTTCTCAGCACAAATTGCAGCAAAGCTCTAGTTTTCTTGGATATAACCCTCTTAG.............................................................................................................................................AGTTTCAATTGATGTAAGTGGAGAGATGAATATGAAGAGACGTGGAGGAGTGGTTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTCTCATGCTTGCGAAGGGCACTGCTATTCACAAGTCTTTTCTTGTTCCTTTATTTGCTTTACAAGCTCCTACTGCAGTTGTCTCGTGGATCCA............................................................................................GGGTGAATATGGCATTTGGTCAGCATTTTTGGCACTTCTTGTTCGTCTCTTCTTCTCCTTTCCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACTTGAATTGCCATTTATAGCATTATTGATGGTAATTGTGGCTCCTTATCAAGTTGCAAATCTAAA.............................................................................GGGGACAAAAGAAGGTGTCATTCTTTCCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E299358" ref_strand="+" ref_description="SGN-E299358 [cLET-43-C19]">
      <seq>ctttatcttcattcgccggcgtataagttaaacagttgaggaattttaaaacaaagatatagaatgatgtccctttctctttctctttcttatcctatacatcgttttgcttcctacaataaacaactatgcgctttgagatctcctcaatctcatcacactaggatttctcagcacaaattgcagcaaagctctagttttcttggatataaccctcttagagtttcaattgatgtaagtggagagatgaatatgaagagacgtggaggagtggtttgatctgctgctgctcttactcctagaaatctacagtgggtctgtactatttcctctgtggttctcatgcttgcgaagggcactgctattcacaagtcttttcttgttcctttatttgctttacaagctcctactgcagttgtctcgtggatccagggtgaatatggcatttggtcagcatttttggcacttcttgttcgtctcttcttctcctttcctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="92060" stop="95754"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92360" g_stop="92580" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="221" r_length="221" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92581" i_stop="92721" i_length="141">
            <donor d_prob="0.898" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92722" g_stop="92835" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="335" r_length="114" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92836" i_stop="95201" i_length="2366">
            <donor d_prob="0.201" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95202" g_stop="95297" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="336" r_stop="431" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95298" i_stop="95389" i_length="92">
            <donor d_prob="0.902" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95390" g_stop="95454" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="496" r_length="65" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E299358" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E299358" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92360" e_stop="92580"/>
          <exon e_start="92722" e_stop="92835"/>
          <exon e_start="95202" e_stop="95297"/>
          <exon e_start="95390" e_stop="95454"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTATCTTCATTCGCCGGCGTATAAGTTAAACAGTAGAGGAATTTTAAAACAAAGATATAGAATGATGTCCCTTTCTCTTTCTCTTTCTTATCCTATACATCGTTTTGCTTCCTACAATAAACAACTATGCGCTTTGAGATCTCCTCAATCTCATCACACTAGGATTTCTCAGCACAAATTGCAGCAAAGCTCTAGTTTTCTTGGATATAACCCTCTCAGGTTTGTTGTTTGATTGATTTGGATATATGAACCTCATTTCAAATTTGGTCTATCAAAATCCCATTTTTGCACGTGTTTTGGGGCGTATTTCCCTAATTTTTTTATCTTATCCTCATGGGGTTTTGATTGTTTCTTTTACAGAGTTTCAATTGATGTAAGTGGAGAGATGAATATGAAGAGACGTGGAGGAGTGGTTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGTGTAAGTCTCCCTTACTCATTCGCGCGCTTACAGGAGTTGGTGCTAAGTTTGCTGGTAAAATGGGACATCTAAAGAATTGATTTTTCATTTTCATTTTGACCATGTGAAATTAGAAGTGGTATAAATCTAGTATTGACTCTCAATAACGTCGTATGAATCTTTTTTAGTACTTTTTTTTTTTTGGAATATGATGGGAGTGTCTTCGGTGAAAGGCAAAATTTGGGAAGCAAAGTTGAGATAGTTTGGGCTCGTGATGAATAGATGCAGGGATAGCAAGTGCGGATGTGTGAGCGGTTGTCTGGATTGATCTGTGAGAGGTAGAAGTAGACCAACAAAGTATTGGAGAGAGATGATTAGATACGACATGACATAGTTGGAGTTCACCGAGGACATGATCTTAGATAGTAAGGTGTGGACGACACGGATTAGGGTAGAATGGTAGTAGGTAGGAGTGTATGGACTTATTGTCCATACTACTCGTCGTAGTATTACTCCTGTTTCTTGTTCTTCAATTTCTGTTATTATATGTTGTTCCGTGTAGTTTGATTATAACATTATTTTGTTGTAGTATTGTTCTGCTACAACCTGTGTTATATTACTGTCTGTTGTTCCTTTTATTTCCATTACTTCTTTTTTTTCTAGACTGTTTTTATCTTGACACCGGGTCTATTGGAAACAATCGCTCTACCTCTGAGGTAGAGATTAGGTCTGGTTACGCTCTACCCTCCACTAAAATTTGTGTGACTACACTAGGTATGTTGTTGTTGAGACGTTGAGTGGAACTCTAAGTTCACTTAGGAAAATACCTTATTAGAGTTCCAGCACCAAGGAGAACCTTGTAGACAAAATAAATATACAAATTTTAACCCATATTTTAAAGTTGTAGGGAGCATATGAAGTCCACCAAAGCATTAACATTATTCAAACTACACCAAACATCAAGATGCATAATGTGATTAACAAGAGAAACTCCCTCAAAACACCTCCAGTTCCTTTCCCTCAATAAGGGCCAATATAATCCATTATGGAATGTAACAAACCTTTCGCAGAGAGTTCTGTGGCTCTCTTCCTGTTAACTACAATATGTATCTCTAAAGAATTCGGCATTACCATTGATCCCAGGTAAATTTACAAAACATATTCTGTATGTCAGTACTCATCTCTGAGTGTAGGAAAAGGAGATTCTGTCCTACATATCCTTCTCTCACAGTTGTTACCTATTTTTCAAATCCGTTTCCCTCTTCTCAGGTGTGATACATGCTTCATTTGTGCTGTACAAAATACTTCTAGAGGAACCTTATGTTTTCAAATTAGTTGTCAAGACTCTTTCCTCTGGTTTATATATAGTAACACCCGTATAGAATAAACCCCTTTTGTGTGTCACTTACTCTTCCTTTTCAATTATCCTGTTTTCTTAGTTCAGTTGTCAGCAACAAGTTAGCCTCTCCAATTTCCAGTCTTGACTCTCCTATTGATGTTATCTCCACCTATTATTTTCTAGACAATAGGTAATTGTGCATTAGATCGTGATTTGAAACTGGATAAGTTATGACATACCTGTAATTCCTACCAAAATTTGATCTTCACACCATTTCCCAATTCAACTTAAACATGTTGCCTCTGGATTCTTCTCACTGGTTTCTAATATGCACTGATGATCATGTAGATAATATTTCCATCCATATGATTTTAGTTCTATTTGGTCTCCTTTAGCCCCTTCAATAATCTCATGATGACACATGTTGACCTGTGCAGGATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATTTAGAAGCATCAACCAGGAGAGAGCATTGGCCCTTGCCATTGACACATTAGCTTTGTGTGCTTCACACTCTATCGTTAAGGCTTGAGTTAACCCAACACTGTACAGATAGAAAAGATAAAAAGAGAGGGACATGTGCAGAAGTCTTTCTTTATAGATTGTACACTTGTTCCTGTCACGTAACATTAGTCAATAATATTTTTAGAGATTTACTGTTTGCTTTCTCTTTTTTCTCGAGTATGACTGCACATTAATTTCTTTGGTACAAGTGTATTGAATCTTAGAAGATTCAAAGTCAGTGCCCCTTGTTTTATAAGTCTTGTATAATTTCCGGCGAATAAACTATCTTTTTTTCTTTTAAAGTAAACCTTGTTCTGCATGCTGTGCCATGATTTGTATACTGCAATCTGACAGTCAAATGGTTATTTTTAGGGTTCTCATGCTTGCGAAGGGCACTGCTATTCACAAGTCTTTTCTTGTTCCTTTATTTGCTTTACAAGCTCCTACTGCAGTTGTCTCGTGGATCCAGTAAGTTTATTAGCATCTGTTAAGTAGCTTGTGCTTACTTCATTAAGCTGAATGTTTTGCAGTACAGCAAACTGACGAGAAATAACTTTCAGGGGTGAATATGGCATTTGGTCAGCATTTTTGGCACTTCTTGTTCGTCTCTTCTTCTCCTTTCCTG</genome_strand>
        <mrna_strand>CTTTATCTTCATTCGCCGGCGTATAAGTTAAACAGTTGAGGAATTTTAAAACAAAGATATAGAATGATGTCCCTTTCTCTTTCTCTTTCTTATCCTATACATCGTTTTGCTTCCTACAATAAACAACTATGCGCTTTGAGATCTCCTCAATCTCATCACACTAGGATTTCTCAGCACAAATTGCAGCAAAGCTCTAGTTTTCTTGGATATAACCCTCTTAG.............................................................................................................................................AGTTTCAATTGATGTAAGTGGAGAGATGAATATGAAGAGACGTGGAGGAGTGGTTTGATCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTCTCATGCTTGCGAAGGGCACTGCTATTCACAAGTCTTTTCTTGTTCCTTTATTTGCTTTACAAGCTCCTACTGCAGTTGTCTCGTGGATCCA............................................................................................GGGTGAATATGGCATTTGGTCAGCATTTTTGGCACTTCTTGTTCGTCTCTTCTTCTCCTTTCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E395868" ref_strand="+" ref_description="SGN-E395868 [TUS-18-I15]">
      <seq>tttgttctgctgctgctcttactcctagaaatctacagtgggtctgtactatttcctctgtgatgtggccaaaccatctcatttgactttctcccattttatcctcgagttcaacttggacttccaaagtttccagattacttgatgattaagggtcacttacaggctaatgtacaagcttgatcgtaaagagctaaggtgtataaggaaaacagtttgctggtagcaccactcgttagaatttagaagcatcaaccaggagagagcattggcccttgccattgagacattatttttttgtgcatcacactctatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="92475" stop="95145"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92775" g_stop="92835" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92836" i_stop="94590" i_length="1755">
            <donor d_prob="0.201" d_score="1.00"/>
            <acceptor a_prob="0.933" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94591" g_stop="94845" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="316" r_length="255" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E395868" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>316</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E395868" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92775" e_stop="92835"/>
          <exon e_start="94591" e_stop="94845"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGTGTAAGTCTCCCTTACTCATTCGCGCGCTTACAGGAGTTGGTGCTAAGTTTGCTGGTAAAATGGGACATCTAAAGAATTGATTTTTCATTTTCATTTTGACCATGTGAAATTAGAAGTGGTATAAATCTAGTATTGACTCTCAATAACGTCGTATGAATCTTTTTTAGTACTTTTTTTTTTTTGGAATATGATGGGAGTGTCTTCGGTGAAAGGCAAAATTTGGGAAGCAAAGTTGAGATAGTTTGGGCTCGTGATGAATAGATGCAGGGATAGCAAGTGCGGATGTGTGAGCGGTTGTCTGGATTGATCTGTGAGAGGTAGAAGTAGACCAACAAAGTATTGGAGAGAGATGATTAGATACGACATGACATAGTTGGAGTTCACCGAGGACATGATCTTAGATAGTAAGGTGTGGACGACACGGATTAGGGTAGAATGGTAGTAGGTAGGAGTGTATGGACTTATTGTCCATACTACTCGTCGTAGTATTACTCCTGTTTCTTGTTCTTCAATTTCTGTTATTATATGTTGTTCCGTGTAGTTTGATTATAACATTATTTTGTTGTAGTATTGTTCTGCTACAACCTGTGTTATATTACTGTCTGTTGTTCCTTTTATTTCCATTACTTCTTTTTTTTCTAGACTGTTTTTATCTTGACACCGGGTCTATTGGAAACAATCGCTCTACCTCTGAGGTAGAGATTAGGTCTGGTTACGCTCTACCCTCCACTAAAATTTGTGTGACTACACTAGGTATGTTGTTGTTGAGACGTTGAGTGGAACTCTAAGTTCACTTAGGAAAATACCTTATTAGAGTTCCAGCACCAAGGAGAACCTTGTAGACAAAATAAATATACAAATTTTAACCCATATTTTAAAGTTGTAGGGAGCATATGAAGTCCACCAAAGCATTAACATTATTCAAACTACACCAAACATCAAGATGCATAATGTGATTAACAAGAGAAACTCCCTCAAAACACCTCCAGTTCCTTTCCCTCAATAAGGGCCAATATAATCCATTATGGAATGTAACAAACCTTTCGCAGAGAGTTCTGTGGCTCTCTTCCTGTTAACTACAATATGTATCTCTAAAGAATTCGGCATTACCATTGATCCCAGGTAAATTTACAAAACATATTCTGTATGTCAGTACTCATCTCTGAGTGTAGGAAAAGGAGATTCTGTCCTACATATCCTTCTCTCACAGTTGTTACCTATTTTTCAAATCCGTTTCCCTCTTCTCAGGTGTGATACATGCTTCATTTGTGCTGTACAAAATACTTCTAGAGGAACCTTATGTTTTCAAATTAGTTGTCAAGACTCTTTCCTCTGGTTTATATATAGTAACACCCGTATAGAATAAACCCCTTTTGTGTGTCACTTACTCTTCCTTTTCAATTATCCTGTTTTCTTAGTTCAGTTGTCAGCAACAAGTTAGCCTCTCCAATTTCCAGTCTTGACTCTCCTATTGATGTTATCTCCACCTATTATTTTCTAGACAATAGGTAATTGTGCATTAGATCGTGATTTGAAACTGGATAAGTTATGACATACCTGTAATTCCTACCAAAATTTGATCTTCACACCATTTCCCAATTCAACTTAAACATGTTGCCTCTGGATTCTTCTCACTGGTTTCTAATATGCACTGATGATCATGTAGATAATATTTCCATCCATATGATTTTAGTTCTATTTGGTCTCCTTTAGCCCCTTCAATAATCTCATGATGACACATGTTGACCTGTGCAGGATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATTTAGAAGCATCAACCAGGAGAGAGCATTGGCCCTTGCCATTGACACATTAGCTTTGTGTGCTTCACACTCTATC</genome_strand>
        <mrna_strand>TTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATTTAGAAGCATCAACCAGGAGAGAGCATTGGCCCTTGCCATTGAGACATTATTTTTTTGTGCATCACACTCTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E374993" ref_strand="+" ref_description="SGN-E374993 [TUS-36-E5]">
      <seq>ttgttctgctgctgctcttactcctagaaatctacagtgggtctgtactatttcctctgtgatgtggccaaaccatctcatttgactttctcccattttatcctcgagttcaacttggacttccaaagtttccagattacttgatgattaagggtcacttacaggctaatgtacaagcttgatcgtaaagagctaaggtgtataaggaaaacagtttgctggtagcaccactcgttagaatttagaagcatcaaccaggagagagcattggcccttgccattgacacattagctttgtgtgcttcacactctatcgttaaggcttgagttaacccaacactgtacagatagaaaagataaaaagagagggacgtgtgcagaagtctttctttatagattgtacacttgttcctgtcacgtaacattagtcaataatatttttagagatttactgtttgctttctcttttttctcgagtatgactgcacattaatttctttggtacaagtgtattgaatcttagaagattcaaagtcagtgccccttgtttttatagtcttgtataatttccggcgaataaactatcttttttttcttttaaagtaaacctttggtctgcatgctgtgccatgatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="92476" stop="95463"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92776" g_stop="92835" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92836" i_stop="94590" i_length="1755">
            <donor d_prob="0.201" d_score="1.00"/>
            <acceptor a_prob="0.933" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94591" g_stop="95163" g_length="573"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="635" r_length="575" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E374993" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E374993" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92776" e_stop="92835"/>
          <exon e_start="94591" e_stop="95163"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGTGTAAGTCTCCCTTACTCATTCGCGCGCTTACAGGAGTTGGTGCTAAGTTTGCTGGTAAAATGGGACATCTAAAGAATTGATTTTTCATTTTCATTTTGACCATGTGAAATTAGAAGTGGTATAAATCTAGTATTGACTCTCAATAACGTCGTATGAATCTTTTTTAGTACTTTTTTTTTTTTGGAATATGATGGGAGTGTCTTCGGTGAAAGGCAAAATTTGGGAAGCAAAGTTGAGATAGTTTGGGCTCGTGATGAATAGATGCAGGGATAGCAAGTGCGGATGTGTGAGCGGTTGTCTGGATTGATCTGTGAGAGGTAGAAGTAGACCAACAAAGTATTGGAGAGAGATGATTAGATACGACATGACATAGTTGGAGTTCACCGAGGACATGATCTTAGATAGTAAGGTGTGGACGACACGGATTAGGGTAGAATGGTAGTAGGTAGGAGTGTATGGACTTATTGTCCATACTACTCGTCGTAGTATTACTCCTGTTTCTTGTTCTTCAATTTCTGTTATTATATGTTGTTCCGTGTAGTTTGATTATAACATTATTTTGTTGTAGTATTGTTCTGCTACAACCTGTGTTATATTACTGTCTGTTGTTCCTTTTATTTCCATTACTTCTTTTTTTTCTAGACTGTTTTTATCTTGACACCGGGTCTATTGGAAACAATCGCTCTACCTCTGAGGTAGAGATTAGGTCTGGTTACGCTCTACCCTCCACTAAAATTTGTGTGACTACACTAGGTATGTTGTTGTTGAGACGTTGAGTGGAACTCTAAGTTCACTTAGGAAAATACCTTATTAGAGTTCCAGCACCAAGGAGAACCTTGTAGACAAAATAAATATACAAATTTTAACCCATATTTTAAAGTTGTAGGGAGCATATGAAGTCCACCAAAGCATTAACATTATTCAAACTACACCAAACATCAAGATGCATAATGTGATTAACAAGAGAAACTCCCTCAAAACACCTCCAGTTCCTTTCCCTCAATAAGGGCCAATATAATCCATTATGGAATGTAACAAACCTTTCGCAGAGAGTTCTGTGGCTCTCTTCCTGTTAACTACAATATGTATCTCTAAAGAATTCGGCATTACCATTGATCCCAGGTAAATTTACAAAACATATTCTGTATGTCAGTACTCATCTCTGAGTGTAGGAAAAGGAGATTCTGTCCTACATATCCTTCTCTCACAGTTGTTACCTATTTTTCAAATCCGTTTCCCTCTTCTCAGGTGTGATACATGCTTCATTTGTGCTGTACAAAATACTTCTAGAGGAACCTTATGTTTTCAAATTAGTTGTCAAGACTCTTTCCTCTGGTTTATATATAGTAACACCCGTATAGAATAAACCCCTTTTGTGTGTCACTTACTCTTCCTTTTCAATTATCCTGTTTTCTTAGTTCAGTTGTCAGCAACAAGTTAGCCTCTCCAATTTCCAGTCTTGACTCTCCTATTGATGTTATCTCCACCTATTATTTTCTAGACAATAGGTAATTGTGCATTAGATCGTGATTTGAAACTGGATAAGTTATGACATACCTGTAATTCCTACCAAAATTTGATCTTCACACCATTTCCCAATTCAACTTAAACATGTTGCCTCTGGATTCTTCTCACTGGTTTCTAATATGCACTGATGATCATGTAGATAATATTTCCATCCATATGATTTTAGTTCTATTTGGTCTCCTTTAGCCCCTTCAATAATCTCATGATGACACATGTTGACCTGTGCAGGATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATTTAGAAGCATCAACCAGGAGAGAGCATTGGCCCTTGCCATTGACACATTAGCTTTGTGTGCTTCACACTCTATCGTTAAGGCTTGAGTTAACCCAACACTGTACAGATAGAAAAGATAAAAAGAGAGGGACATGTGCAGAAGTCTTTCTTTATAGATTGTACACTTGTTCCTGTCACGTAACATTAGTCAATAATATTTTTAGAGATTTACTGTTTGCTTTCTCTTTTTTCTCGAGTATGACTGCACATTAATTTCTTTGGTACAAGTGTATTGAATCTTAGAAGATTCAAAGTCAGTGCCCCTTGTTTTATAAGTCTTGTATAATTTCCGGCGAATAAACTATC-TTTTTTTCTTTTAAAGTAAACC-TTGTTCTGCATGCTGTGCCATGATT</genome_strand>
        <mrna_strand>TTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATTTAGAAGCATCAACCAGGAGAGAGCATTGGCCCTTGCCATTGACACATTAGCTTTGTGTGCTTCACACTCTATCGTTAAGGCTTGAGTTAACCCAACACTGTACAGATAGAAAAGATAAAAAGAGAGGGACGTGTGCAGAAGTCTTTCTTTATAGATTGTACACTTGTTCCTGTCACGTAACATTAGTCAATAATATTTTTAGAGATTTACTGTTTGCTTTCTCTTTTTTCTCGAGTATGACTGCACATTAATTTCTTTGGTACAAGTGTATTGAATCTTAGAAGATTCAAAGTCAGTGCCCCTTGTTTTTATAGTCTTGTATAATTTCCGGCGAATAAACTATCTTTTTTTTCTTTTAAAGTAAACCTTTGGTCTGCATGCTGTGCCATGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E231735" ref_strand="+" ref_description="SGN-E231735 [cLED-4-B24]">
      <seq>ttgttctgctgctgctcttactcctagaaatctacagtgggtctgtactatttcctctgtgatgtggccaaaccatctcatttgactttctcccattttatcctcgagttcaacttggacttccaaagtttccagattacttgatgattaagggtcacttacaggctaatgtacaagcttgatcgtaaagagctaaggtgtataaggaaaacagtttgctggtagcaccactcgttagaatttagaagcatcaaccaggagagagcattggcccttgccattgacacattagctttgtgtgcttcacactctatcgttaaggcttgagttaacccaacactgtacagatagaaaagataaaaagagagggacgtgtgcagaagtctttctttatagattgtacacttgttcctgtcacgtaacattagtcaataatatttttagagatttactgtttgctttctcttttttctcgagtatgactgcacattaatttctttggtacaagtgtattgaatcttagaagattcaaagtcagtgcccctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="92476" stop="95376"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92776" g_stop="92835" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92836" i_stop="94590" i_length="1755">
            <donor d_prob="0.201" d_score="1.00"/>
            <acceptor a_prob="0.933" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94591" g_stop="95076" g_length="486"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="546" r_length="486" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E231735" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E231735" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92776" e_stop="92835"/>
          <exon e_start="94591" e_stop="95076"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGTGTAAGTCTCCCTTACTCATTCGCGCGCTTACAGGAGTTGGTGCTAAGTTTGCTGGTAAAATGGGACATCTAAAGAATTGATTTTTCATTTTCATTTTGACCATGTGAAATTAGAAGTGGTATAAATCTAGTATTGACTCTCAATAACGTCGTATGAATCTTTTTTAGTACTTTTTTTTTTTTGGAATATGATGGGAGTGTCTTCGGTGAAAGGCAAAATTTGGGAAGCAAAGTTGAGATAGTTTGGGCTCGTGATGAATAGATGCAGGGATAGCAAGTGCGGATGTGTGAGCGGTTGTCTGGATTGATCTGTGAGAGGTAGAAGTAGACCAACAAAGTATTGGAGAGAGATGATTAGATACGACATGACATAGTTGGAGTTCACCGAGGACATGATCTTAGATAGTAAGGTGTGGACGACACGGATTAGGGTAGAATGGTAGTAGGTAGGAGTGTATGGACTTATTGTCCATACTACTCGTCGTAGTATTACTCCTGTTTCTTGTTCTTCAATTTCTGTTATTATATGTTGTTCCGTGTAGTTTGATTATAACATTATTTTGTTGTAGTATTGTTCTGCTACAACCTGTGTTATATTACTGTCTGTTGTTCCTTTTATTTCCATTACTTCTTTTTTTTCTAGACTGTTTTTATCTTGACACCGGGTCTATTGGAAACAATCGCTCTACCTCTGAGGTAGAGATTAGGTCTGGTTACGCTCTACCCTCCACTAAAATTTGTGTGACTACACTAGGTATGTTGTTGTTGAGACGTTGAGTGGAACTCTAAGTTCACTTAGGAAAATACCTTATTAGAGTTCCAGCACCAAGGAGAACCTTGTAGACAAAATAAATATACAAATTTTAACCCATATTTTAAAGTTGTAGGGAGCATATGAAGTCCACCAAAGCATTAACATTATTCAAACTACACCAAACATCAAGATGCATAATGTGATTAACAAGAGAAACTCCCTCAAAACACCTCCAGTTCCTTTCCCTCAATAAGGGCCAATATAATCCATTATGGAATGTAACAAACCTTTCGCAGAGAGTTCTGTGGCTCTCTTCCTGTTAACTACAATATGTATCTCTAAAGAATTCGGCATTACCATTGATCCCAGGTAAATTTACAAAACATATTCTGTATGTCAGTACTCATCTCTGAGTGTAGGAAAAGGAGATTCTGTCCTACATATCCTTCTCTCACAGTTGTTACCTATTTTTCAAATCCGTTTCCCTCTTCTCAGGTGTGATACATGCTTCATTTGTGCTGTACAAAATACTTCTAGAGGAACCTTATGTTTTCAAATTAGTTGTCAAGACTCTTTCCTCTGGTTTATATATAGTAACACCCGTATAGAATAAACCCCTTTTGTGTGTCACTTACTCTTCCTTTTCAATTATCCTGTTTTCTTAGTTCAGTTGTCAGCAACAAGTTAGCCTCTCCAATTTCCAGTCTTGACTCTCCTATTGATGTTATCTCCACCTATTATTTTCTAGACAATAGGTAATTGTGCATTAGATCGTGATTTGAAACTGGATAAGTTATGACATACCTGTAATTCCTACCAAAATTTGATCTTCACACCATTTCCCAATTCAACTTAAACATGTTGCCTCTGGATTCTTCTCACTGGTTTCTAATATGCACTGATGATCATGTAGATAATATTTCCATCCATATGATTTTAGTTCTATTTGGTCTCCTTTAGCCCCTTCAATAATCTCATGATGACACATGTTGACCTGTGCAGGATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATTTAGAAGCATCAACCAGGAGAGAGCATTGGCCCTTGCCATTGACACATTAGCTTTGTGTGCTTCACACTCTATCGTTAAGGCTTGAGTTAACCCAACACTGTACAGATAGAAAAGATAAAAAGAGAGGGACATGTGCAGAAGTCTTTCTTTATAGATTGTACACTTGTTCCTGTCACGTAACATTAGTCAATAATATTTTTAGAGATTTACTGTTTGCTTTCTCTTTTTTCTCGAGTATGACTGCACATTAATTTCTTTGGTACAAGTGTATTGAATCTTAGAAGATTCAAAGTCAGTGCCCCTT</genome_strand>
        <mrna_strand>TTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATTTAGAAGCATCAACCAGGAGAGAGCATTGGCCCTTGCCATTGACACATTAGCTTTGTGTGCTTCACACTCTATCGTTAAGGCTTGAGTTAACCCAACACTGTACAGATAGAAAAGATAAAAAGAGAGGGACGTGTGCAGAAGTCTTTCTTTATAGATTGTACACTTGTTCCTGTCACGTAACATTAGTCAATAATATTTTTAGAGATTTACTGTTTGCTTTCTCTTTTTTCTCGAGTATGACTGCACATTAATTTCTTTGGTACAAGTGTATTGAATCTTAGAAGATTCAAAGTCAGTGCCCCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E231697" ref_strand="+" ref_description="SGN-E231697 [cLED-4-B17]">
      <seq>ttgttctgctgctgctcttactcctagaaatctacagtgggtctgtactatttcctctgtgatgtggccaaaccatctcatttgactttctcccattttatcctcgagttcaacttggacttccaaagtttccagattacttgatgattaagggtcacttacaggctaatgtacaagcttgatcgtaaagagctaaggtgtataaggaaaacagtttgctggtagcaccactcgttagaatttagaagcatcaaccaggagagagcattggcccttgccattgacacattagctttgtgtgcttcacactctatcgttaaggcttgagttaacccaacactgtacagatagaaaagataaaaagagagggacgtgtgcagaagtctttctttatagattgtacacttgttcctgtcacgtaacattagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="92476" stop="95259"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92776" g_stop="92835" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92836" i_stop="94590" i_length="1755">
            <donor d_prob="0.201" d_score="1.00"/>
            <acceptor a_prob="0.933" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94591" g_stop="94959" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="429" r_length="369" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E231697" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E231697" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92776" e_stop="92835"/>
          <exon e_start="94591" e_stop="94959"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGTGTAAGTCTCCCTTACTCATTCGCGCGCTTACAGGAGTTGGTGCTAAGTTTGCTGGTAAAATGGGACATCTAAAGAATTGATTTTTCATTTTCATTTTGACCATGTGAAATTAGAAGTGGTATAAATCTAGTATTGACTCTCAATAACGTCGTATGAATCTTTTTTAGTACTTTTTTTTTTTTGGAATATGATGGGAGTGTCTTCGGTGAAAGGCAAAATTTGGGAAGCAAAGTTGAGATAGTTTGGGCTCGTGATGAATAGATGCAGGGATAGCAAGTGCGGATGTGTGAGCGGTTGTCTGGATTGATCTGTGAGAGGTAGAAGTAGACCAACAAAGTATTGGAGAGAGATGATTAGATACGACATGACATAGTTGGAGTTCACCGAGGACATGATCTTAGATAGTAAGGTGTGGACGACACGGATTAGGGTAGAATGGTAGTAGGTAGGAGTGTATGGACTTATTGTCCATACTACTCGTCGTAGTATTACTCCTGTTTCTTGTTCTTCAATTTCTGTTATTATATGTTGTTCCGTGTAGTTTGATTATAACATTATTTTGTTGTAGTATTGTTCTGCTACAACCTGTGTTATATTACTGTCTGTTGTTCCTTTTATTTCCATTACTTCTTTTTTTTCTAGACTGTTTTTATCTTGACACCGGGTCTATTGGAAACAATCGCTCTACCTCTGAGGTAGAGATTAGGTCTGGTTACGCTCTACCCTCCACTAAAATTTGTGTGACTACACTAGGTATGTTGTTGTTGAGACGTTGAGTGGAACTCTAAGTTCACTTAGGAAAATACCTTATTAGAGTTCCAGCACCAAGGAGAACCTTGTAGACAAAATAAATATACAAATTTTAACCCATATTTTAAAGTTGTAGGGAGCATATGAAGTCCACCAAAGCATTAACATTATTCAAACTACACCAAACATCAAGATGCATAATGTGATTAACAAGAGAAACTCCCTCAAAACACCTCCAGTTCCTTTCCCTCAATAAGGGCCAATATAATCCATTATGGAATGTAACAAACCTTTCGCAGAGAGTTCTGTGGCTCTCTTCCTGTTAACTACAATATGTATCTCTAAAGAATTCGGCATTACCATTGATCCCAGGTAAATTTACAAAACATATTCTGTATGTCAGTACTCATCTCTGAGTGTAGGAAAAGGAGATTCTGTCCTACATATCCTTCTCTCACAGTTGTTACCTATTTTTCAAATCCGTTTCCCTCTTCTCAGGTGTGATACATGCTTCATTTGTGCTGTACAAAATACTTCTAGAGGAACCTTATGTTTTCAAATTAGTTGTCAAGACTCTTTCCTCTGGTTTATATATAGTAACACCCGTATAGAATAAACCCCTTTTGTGTGTCACTTACTCTTCCTTTTCAATTATCCTGTTTTCTTAGTTCAGTTGTCAGCAACAAGTTAGCCTCTCCAATTTCCAGTCTTGACTCTCCTATTGATGTTATCTCCACCTATTATTTTCTAGACAATAGGTAATTGTGCATTAGATCGTGATTTGAAACTGGATAAGTTATGACATACCTGTAATTCCTACCAAAATTTGATCTTCACACCATTTCCCAATTCAACTTAAACATGTTGCCTCTGGATTCTTCTCACTGGTTTCTAATATGCACTGATGATCATGTAGATAATATTTCCATCCATATGATTTTAGTTCTATTTGGTCTCCTTTAGCCCCTTCAATAATCTCATGATGACACATGTTGACCTGTGCAGGATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATTTAGAAGCATCAACCAGGAGAGAGCATTGGCCCTTGCCATTGACACATTAGCTTTGTGTGCTTCACACTCTATCGTTAAGGCTTGAGTTAACCCAACACTGTACAGATAGAAAAGATAAAAAGAGAGGGACATGTGCAGAAGTCTTTCTTTATAGATTGTACACTTGTTCCTGTCACGTAACATTAGT</genome_strand>
        <mrna_strand>TTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATTTAGAAGCATCAACCAGGAGAGAGCATTGGCCCTTGCCATTGACACATTAGCTTTGTGTGCTTCACACTCTATCGTTAAGGCTTGAGTTAACCCAACACTGTACAGATAGAAAAGATAAAAAGAGAGGGACGTGTGCAGAAGTCTTTCTTTATAGATTGTACACTTGTTCCTGTCACGTAACATTAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E236567" ref_strand="+" ref_description="SGN-E236567 [cLED-13-I16]">
      <seq>ttgttctgctgctgctcttactcctagaaatctacagtgggtctgtactatttcctctgtgatgtggccaaaccatctcatttgactttctcccattttatcctcgagttcaacttggacttccaaagtttccagattacttgatgattaagggtcacttacaggctaatgtacaagcttgatcgtaaagagctaaggtgtataaggaaaacagtttgctggtagcaccactcgttagaatttagaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="92476" stop="95078"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92776" g_stop="92835" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92836" i_stop="94590" i_length="1755">
            <donor d_prob="0.201" d_score="1.00"/>
            <acceptor a_prob="0.933" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94591" g_stop="94778" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="248" r_length="188" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E236567" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>248</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E236567" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92776" e_stop="92835"/>
          <exon e_start="94591" e_stop="94778"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGTGTAAGTCTCCCTTACTCATTCGCGCGCTTACAGGAGTTGGTGCTAAGTTTGCTGGTAAAATGGGACATCTAAAGAATTGATTTTTCATTTTCATTTTGACCATGTGAAATTAGAAGTGGTATAAATCTAGTATTGACTCTCAATAACGTCGTATGAATCTTTTTTAGTACTTTTTTTTTTTTGGAATATGATGGGAGTGTCTTCGGTGAAAGGCAAAATTTGGGAAGCAAAGTTGAGATAGTTTGGGCTCGTGATGAATAGATGCAGGGATAGCAAGTGCGGATGTGTGAGCGGTTGTCTGGATTGATCTGTGAGAGGTAGAAGTAGACCAACAAAGTATTGGAGAGAGATGATTAGATACGACATGACATAGTTGGAGTTCACCGAGGACATGATCTTAGATAGTAAGGTGTGGACGACACGGATTAGGGTAGAATGGTAGTAGGTAGGAGTGTATGGACTTATTGTCCATACTACTCGTCGTAGTATTACTCCTGTTTCTTGTTCTTCAATTTCTGTTATTATATGTTGTTCCGTGTAGTTTGATTATAACATTATTTTGTTGTAGTATTGTTCTGCTACAACCTGTGTTATATTACTGTCTGTTGTTCCTTTTATTTCCATTACTTCTTTTTTTTCTAGACTGTTTTTATCTTGACACCGGGTCTATTGGAAACAATCGCTCTACCTCTGAGGTAGAGATTAGGTCTGGTTACGCTCTACCCTCCACTAAAATTTGTGTGACTACACTAGGTATGTTGTTGTTGAGACGTTGAGTGGAACTCTAAGTTCACTTAGGAAAATACCTTATTAGAGTTCCAGCACCAAGGAGAACCTTGTAGACAAAATAAATATACAAATTTTAACCCATATTTTAAAGTTGTAGGGAGCATATGAAGTCCACCAAAGCATTAACATTATTCAAACTACACCAAACATCAAGATGCATAATGTGATTAACAAGAGAAACTCCCTCAAAACACCTCCAGTTCCTTTCCCTCAATAAGGGCCAATATAATCCATTATGGAATGTAACAAACCTTTCGCAGAGAGTTCTGTGGCTCTCTTCCTGTTAACTACAATATGTATCTCTAAAGAATTCGGCATTACCATTGATCCCAGGTAAATTTACAAAACATATTCTGTATGTCAGTACTCATCTCTGAGTGTAGGAAAAGGAGATTCTGTCCTACATATCCTTCTCTCACAGTTGTTACCTATTTTTCAAATCCGTTTCCCTCTTCTCAGGTGTGATACATGCTTCATTTGTGCTGTACAAAATACTTCTAGAGGAACCTTATGTTTTCAAATTAGTTGTCAAGACTCTTTCCTCTGGTTTATATATAGTAACACCCGTATAGAATAAACCCCTTTTGTGTGTCACTTACTCTTCCTTTTCAATTATCCTGTTTTCTTAGTTCAGTTGTCAGCAACAAGTTAGCCTCTCCAATTTCCAGTCTTGACTCTCCTATTGATGTTATCTCCACCTATTATTTTCTAGACAATAGGTAATTGTGCATTAGATCGTGATTTGAAACTGGATAAGTTATGACATACCTGTAATTCCTACCAAAATTTGATCTTCACACCATTTCCCAATTCAACTTAAACATGTTGCCTCTGGATTCTTCTCACTGGTTTCTAATATGCACTGATGATCATGTAGATAATATTTCCATCCATATGATTTTAGTTCTATTTGGTCTCCTTTAGCCCCTTCAATAATCTCATGATGACACATGTTGACCTGTGCAGGATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATTTAGAAG</genome_strand>
        <mrna_strand>TTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATTTAGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E345250" ref_strand="+" ref_description="SGN-E345250 [cTOF-13-O14]">
      <seq>acagttattacctatttttcaaatccgtttccctcttctcaggtgtgatacatgcttcatttgtgctgtacaaaatacttctagaggaaccttatgttttcaaattagttgtcaagactctttcctctggtttatatatagtaacacccgtatagaataaaccccttttgtgtgtcacttactcttccttttcaattatcctgttttcttagttcagttgtcagcaacaagttagcctctccaatttccagtcttgactctcctattgatgttatctccacctattattttctagacaataggtaattgtgcattagatcgtgatttgaaactggataagttttgacatacctgtaattcctaccaaaatttgatcttcacaccatttcccaattcaacttaaacatgttgcctctggattcttctcactggtttctaatatgcactgatgatcatgtagataatatttccatccatatgattttagttctatttggtctcctttagccccttcaataatctcatgatgacacatgttgacctgtgcaggatgtggccaaaccatctcatttgactntctcccattttatcctcgagttcaacttggacttccaaagtttccagattacttgatgattaagggtcacttacaggctaatgtacaagcttgatcgtaaagagctaaggtgtataaggaaaacagtttgctggtagcaccactcgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="93742" stop="95065"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94042" g_stop="94765" g_length="724"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="724" r_length="724" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E345250" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>724</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E345250" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94042" e_stop="94765"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGTTGTTACCTATTTTTCAAATCCGTTTCCCTCTTCTCAGGTGTGATACATGCTTCATTTGTGCTGTACAAAATACTTCTAGAGGAACCTTATGTTTTCAAATTAGTTGTCAAGACTCTTTCCTCTGGTTTATATATAGTAACACCCGTATAGAATAAACCCCTTTTGTGTGTCACTTACTCTTCCTTTTCAATTATCCTGTTTTCTTAGTTCAGTTGTCAGCAACAAGTTAGCCTCTCCAATTTCCAGTCTTGACTCTCCTATTGATGTTATCTCCACCTATTATTTTCTAGACAATAGGTAATTGTGCATTAGATCGTGATTTGAAACTGGATAAGTTATGACATACCTGTAATTCCTACCAAAATTTGATCTTCACACCATTTCCCAATTCAACTTAAACATGTTGCCTCTGGATTCTTCTCACTGGTTTCTAATATGCACTGATGATCATGTAGATAATATTTCCATCCATATGATTTTAGTTCTATTTGGTCTCCTTTAGCCCCTTCAATAATCTCATGATGACACATGTTGACCTGTGCAGGATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGT</genome_strand>
        <mrna_strand>ACAGTTATTACCTATTTTTCAAATCCGTTTCCCTCTTCTCAGGTGTGATACATGCTTCATTTGTGCTGTACAAAATACTTCTAGAGGAACCTTATGTTTTCAAATTAGTTGTCAAGACTCTTTCCTCTGGTTTATATATAGTAACACCCGTATAGAATAAACCCCTTTTGTGTGTCACTTACTCTTCCTTTTCAATTATCCTGTTTTCTTAGTTCAGTTGTCAGCAACAAGTTAGCCTCTCCAATTTCCAGTCTTGACTCTCCTATTGATGTTATCTCCACCTATTATTTTCTAGACAATAGGTAATTGTGCATTAGATCGTGATTTGAAACTGGATAAGTTTTGACATACCTGTAATTCCTACCAAAATTTGATCTTCACACCATTTCCCAATTCAACTTAAACATGTTGCCTCTGGATTCTTCTCACTGGTTTCTAATATGCACTGATGATCATGTAGATAATATTTCCATCCATATGATTTTAGTTCTATTTGGTCTCCTTTAGCCCCTTCAATAATCTCATGATGACACATGTTGACCTGTGCAGGATGTGGCCAAACCATCTCATTTGACTNTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E374992" ref_strand="+" ref_description="SGN-E374992 [TUS-36-E5](-)">
      <seq>tttagggttttcatgcttgcgaagggcactgctattcacaagtctttttttgttcctttatttgctttacaagctcctactgcagttgtttcgtggatccagggtgaatatggcatttggtcagcatttttggcacttcttgttcgtctcttcttctcctttcctggtgaacttgaattgccatttatagcattattgatggtaattgtggctccttatcaagttgcaaatttaagggggacaaaggaaggggtcattctttccttggctataacagcttatttgggtttccagcatttcacacgtgctggcagcttgcaaaaggcgtttgatcaaggttcaattattgcccccctagccatcatttgtattcttgctgtgccatgcttgcttttgatttgatgttaaactacaacgatttttcaaaggagtcctgtaaattatttgagtcatttgagggttggagatcacccaaataaatatctttcttttaatccctcgtgtaaatttttagctgtttatttagtcaagtttgtggggcaaattaaggtgaatatatttatgcaggaataaataggataaaccagctttccttttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="94897" stop="96792"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95197" g_stop="95297" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="101" r_length="101" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95298" i_stop="95389" i_length="92">
            <donor d_prob="0.902" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95390" g_stop="95454" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="166" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="95455" i_stop="95982" i_length="528">
            <donor d_prob="0.910" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95983" g_stop="96052" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="236" r_length="70" r_score="0.986"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="96053" i_stop="96129" i_length="77">
            <donor d_prob="0.949" d_score="0.98"/>
            <acceptor a_prob="0.971" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="96130" g_stop="96489" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="596" r_length="360" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="598" polyA_stop="632"/>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E374992" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E374992" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95197" e_stop="95297"/>
          <exon e_start="95390" e_stop="95454"/>
          <exon e_start="95983" e_stop="96052"/>
          <exon e_start="96130" e_stop="96489"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAGGGTTCTCATGCTTGCGAAGGGCACTGCTATTCACAAGTCTTTTCTTGTTCCTTTATTTGCTTTACAAGCTCCTACTGCAGTTGTCTCGTGGATCCAGTAAGTTTATTAGCATCTGTTAAGTAGCTTGTGCTTACTTCATTAAGCTGAATGTTTTGCAGTACAGCAAACTGACGAGAAATAACTTTCAGGGGTGAATATGGCATTTGGTCAGCATTTTTGGCACTTCTTGTTCGTCTCTTCTTCTCCTTTCCTGGTTGGTTCCTTTATCATGTCTATGGTTTAAACCTCAAATCTTGAAATTGACAACCTTGTCTTTTGCTTCTGTATTTTGTATGTTGTTGGATAGCATTATGTATTTTGTATGTTGTTGGATAGCATTATCCACCCAATATTCCCTCGGGAAGCAGGCTATTAAATTGTACCCAATATTTTCCTGGTTCTATTTTAAGGTGAAAATCTCAGCCCATTTCTGGGTAGGAAGTAAGAGAATATGCCCAACTTTTGTATGTTTACAACCCTTAGTGAGTTTAACATTCTAAAGTCATAATAGGAAGCAGAATATGTATTCATGCTGCTTAGCAGAAGATTGTGAATGGACATTGAAACTTGAAAGTTTGACCCTGTTCTATGTTATCAAAAGATGATAAGGAGATCATTTTCTAAGGTTGTTGTCAAGATTTTAGCTACTCATTTTCTTTGGACGCTGTTATGTTTGCTACTACATTCAATCATTTAGATGATTGTCTTTGAAATATCTGACTGCGGTCTTGATCATTTGTAGGTGAACTTGAATTGCCATTTATAGCATTATTGATGGTAATTGTGGCTCCTTATCAAGTTGCAAATCTAAGGTTGGTATATCCTTCTCTATAAATGTCACTTGGTCTGATAGAGTAGAGTTATATCTGGTTAGTATTGTTCTTGGCAGGGGGACAAAGGAAGGTGTCATTCTTTCCTTGGCTATAGCAGCTTATCTGGGTTTCCAGCATTTCACACGTGCTGGCAGCTTGCAGAAGGCGTTTGATCAAGGTTCAATTATTGCCACCCTAGCCATCATTTGTATTCTTGCTGTGCCATGCTTGCTCTTGATTTGATGTTAAACTACAGCGATTTCTCAAAGGAGTCCTGTAAATTATTTGAGTCATTTGAGGGTTGGAGATCACACAAATAAATATCTTTCTTTTAATCCCTCGTGTAAATTTCTAGCTGTTTATCTAGTCAAGTTTGTGGGACAAATTAAGGTGAATGTATTTATGCAGGAATAAATAGGATAAACAAGCTTTCATTT</genome_strand>
        <mrna_strand>TTTAGGGTTTTCATGCTTGCGAAGGGCACTGCTATTCACAAGTCTTTTTTTGTTCCTTTATTTGCTTTACAAGCTCCTACTGCAGTTGTTTCGTGGATCCA............................................................................................GGGTGAATATGGCATTTGGTCAGCATTTTTGGCACTTCTTGTTCGTCTCTTCTTCTCCTTTCCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACTTGAATTGCCATTTATAGCATTATTGATGGTAATTGTGGCTCCTTATCAAGTTGCAAATTTAAG.............................................................................GGGGACAAAGGAAGGGGTCATTCTTTCCTTGGCTATAACAGCTTATTTGGGTTTCCAGCATTTCACACGTGCTGGCAGCTTGCAAAAGGCGTTTGATCAAGGTTCAATTATTGCCCCCCTAGCCATCATTTGTATTCTTGCTGTGCCATGCTTGCTTTTGATTTGATGTTAAACTACAACGATTTTTCAAAGGAGTCCTGTAAATTATTTGAGTCATTTGAGGGTTGGAGATCACCCAAATAAATATCTTTCTTTTAATCCCTCGTGTAAATTTTTAGCTGTTTATTTAGTCAAGTTTGTGGGGCAAATTAAGGTGAATATATTTATGCAGGAATAAATAGGATAAACCAGCTTTCCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E391881" ref_strand="+" ref_description="SGN-E391881 [TUS-24-K11](-)">
      <seq>aaggagtcctgtaaattatttgcgtcatttgagggttggagatcacacaaataaatatctttcttttaatccctcgtgtaaatttctagctgtttatctagtcaagtttgtgggacaaattaaggtgaatatatttatgcaggaataaataggataaacaagctttcatttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="96019" stop="96792"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96319" g_stop="96489" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="172" polyA_stop="188"/>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E391881" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>171</cumulative_length_of_scored_exons>
        <coverage percentage="0.910" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E391881" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96319" e_stop="96489"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGAGTCCTGTAAATTATTTGAGTCATTTGAGGGTTGGAGATCACACAAATAAATATCTTTCTTTTAATCCCTCGTGTAAATTTCTAGCTGTTTATCTAGTCAAGTTTGTGGGACAAATTAAGGTGAATGTATTTATGCAGGAATAAATAGGATAAACAAGCTTTCATTT</genome_strand>
        <mrna_strand>AAGGAGTCCTGTAAATTATTTGCGTCATTTGAGGGTTGGAGATCACACAAATAAATATCTTTCTTTTAATCCCTCGTGTAAATTTCTAGCTGTTTATCTAGTCAAGTTTGTGGGACAAATTAAGGTGAATATATTTATGCAGGAATAAATAGGATAAACAAGCTTTCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E538879" ref_strand="+" ref_description="SGN-E538879 [TUS-58-F16](-)">
      <seq>ttgagctgcccgatgggtcgggcgtggttgtaacaattgggaagtatgtcacaccaaatcacatggatattaatggcaatggagttgaaccagatttcaggaattttcctgcttggaatgaagtcaacaatcgtttgtcaaagtgccacaaacaacaagatggataaggtaagggtttctattttcttcttcttgtttctttattaacttgtggtttcttatcatggctctttctgtcacatacagctcgctcgttttcctttcagtgtcattccgattcatcatcatgacagatgaataacttggggtagtccttcggtcgtgcaacactcagtttgatatgatattaacagatgttaaccttcacagtcgcttagcttcacccttagcctgagcatcaccaggaagaaacaaagtacgtaatgcatactcttctattgcctagacatcctcttgaagaacaaatcagatcgatatcagcaactttaatctatcaagatgcagaactggccattggatgataaaattagtaggccagaaccagctgagttgtgtcattgtatttatcttactgatagcaggtgcctatggatgatagtagcacaagttgtggacataaataactagcaatttacctgatacaaccaacagttcatattgtacacacattttgagtaaatgtaaatcaatttgcgcctcattttgatgttccctaataagatgtacttctgtatgaaaaaaaaaaaaaaaaaaaaaaaactcgaggggggcccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="101806" stop="100388"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101506" g_stop="101396" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="111" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101395" i_stop="101316" i_length="80">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101315" g_stop="100689" g_length="627"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="738" r_length="627" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="739" polyA_stop="760"/>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-E538879" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>738</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E538879" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101506" e_stop="101396"/>
          <exon e_start="101315" e_stop="100689"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGCTGCCCGATGGGTCGGGCGTGGTTGTAACAATTGGGAAGTATGTCACACCAAATCACATGGATATTAATGGCAATGGAGTTGAACCAGATTTCAGGAATTTTCCTGGTAAGATGCTCCTATTCACATCATTACATGTGTCAACAGCATTCTGTTTCTCTGAATATAAAACTATATAATATTTGCAGCTTGGAATGAAGTCAACAATCGTTTGTCAAAGTGCCACAAACAACAAGATGGATAAGGTAAGGGTTTCTATTTTCTTCTTCTTGTTTCTTTATTAACTTGTGGTTTCTTATCATGGCTCTTTCTGCCACATACAGCTCGCTCGTTTTCCTTTCAGTGTCATTCCGATTCATCATCATGACAGATGAATAACTTGGGGTAGTCCTTCGGTCGTGCAACACTCAGTTTGATATGATATTAACAGATGTTAACCTTCACAGTCGCTTAGCTTCACCCTTAGCCTGAGCATCACCAGGAAGAAACAAAGTACGTAATGCATACTCTTCTATTGCCTAGACATCCTCTTGAAGAACAAATCAGATCGATATCAGCAACTTTAATCTATCAAGATGCAGAACTGGCCATTGGATGATAAAATTAGTAGGCCAGAACCAGCTGAGTTGTGTCATTGTATTTATTTTACTGATAGCAGGTGCCTATGGATGATAGTAGCACAAGTTTTGGACATAAATAACTAGCAATTTACCTGATACAACCAACAGTTCATATTGTACACACATTTTGAGTAAATGTAAATCAATTTGCGCCTCATTTTGATGTTCCCTAATAAGATGTACTTCTGTATGAAC</genome_strand>
        <mrna_strand>TTGAGCTGCCCGATGGGTCGGGCGTGGTTGTAACAATTGGGAAGTATGTCACACCAAATCACATGGATATTAATGGCAATGGAGTTGAACCAGATTTCAGGAATTTTCCTG................................................................................CTTGGAATGAAGTCAACAATCGTTTGTCAAAGTGCCACAAACAACAAGATGGATAAGGTAAGGGTTTCTATTTTCTTCTTCTTGTTTCTTTATTAACTTGTGGTTTCTTATCATGGCTCTTTCTGTCACATACAGCTCGCTCGTTTTCCTTTCAGTGTCATTCCGATTCATCATCATGACAGATGAATAACTTGGGGTAGTCCTTCGGTCGTGCAACACTCAGTTTGATATGATATTAACAGATGTTAACCTTCACAGTCGCTTAGCTTCACCCTTAGCCTGAGCATCACCAGGAAGAAACAAAGTACGTAATGCATACTCTTCTATTGCCTAGACATCCTCTTGAAGAACAAATCAGATCGATATCAGCAACTTTAATCTATCAAGATGCAGAACTGGCCATTGGATGATAAAATTAGTAGGCCAGAACCAGCTGAGTTGTGTCATTGTATTTATCTTACTGATAGCAGGTGCCTATGGATGATAGTAGCACAAGTTGTGGACATAAATAACTAGCAATTTACCTGATACAACCAACAGTTCATATTGTACACACATTTTGAGTAAATGTAAATCAATTTGCGCCTCATTTTGATGTTCCCTAATAAGATGTACTTCTGTATGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E538882" ref_strand="+" ref_description="SGN-E538882 [TUS-58-F16]">
      <seq>ttgagctgcccgatgggtcgggcgtggttgtaacaattgggaagtatgtcacaccaaatcacatggatattaatggcaatggagttgaaccagatttcaggaattttcctgcttggaatgaagtcaacaatcgtttgtcaaagtgccacaaacaacaagatggataaggtaagggtttctattttcttcttcttgtttctttattaacttgtggtttcttatcatggctctttctgtcacatacagctcgctcgttttcctttcagtgtcattccgattcatcatcatgacagatgaataacttggggtagtccttcggtcgtgcaacactcagtttgatatgatattaacagatgttaaccttcacagtcgcttagcttcacccttagcctgagcatcaccaggaagaaacaaagtacgtaatgcatactcttctattgcctagacatcctcttgaagaacaaatcagatcgatatcagcaactttaatctatcaagatgcagaactggccattggatgataaaattagtaggccagaaccagctgagttgtgtcattgtatttatcttactgatagcaggtgcctatggatgatagtagcacaagttgtggacataaataactagcaatttacctgatacaaccaacagttcatattgtacacacattttgagtaaatgtaaatcaatttgcgcctcattttgatgttccctaataagatgtacttctgtatgaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="101806" stop="100388"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101506" g_stop="101396" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="111" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101395" i_stop="101316" i_length="80">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101315" g_stop="100689" g_length="627"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="738" r_length="627" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="739" polyA_stop="750"/>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-E538882" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>738</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E538882" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101506" e_stop="101396"/>
          <exon e_start="101315" e_stop="100689"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGCTGCCCGATGGGTCGGGCGTGGTTGTAACAATTGGGAAGTATGTCACACCAAATCACATGGATATTAATGGCAATGGAGTTGAACCAGATTTCAGGAATTTTCCTGGTAAGATGCTCCTATTCACATCATTACATGTGTCAACAGCATTCTGTTTCTCTGAATATAAAACTATATAATATTTGCAGCTTGGAATGAAGTCAACAATCGTTTGTCAAAGTGCCACAAACAACAAGATGGATAAGGTAAGGGTTTCTATTTTCTTCTTCTTGTTTCTTTATTAACTTGTGGTTTCTTATCATGGCTCTTTCTGCCACATACAGCTCGCTCGTTTTCCTTTCAGTGTCATTCCGATTCATCATCATGACAGATGAATAACTTGGGGTAGTCCTTCGGTCGTGCAACACTCAGTTTGATATGATATTAACAGATGTTAACCTTCACAGTCGCTTAGCTTCACCCTTAGCCTGAGCATCACCAGGAAGAAACAAAGTACGTAATGCATACTCTTCTATTGCCTAGACATCCTCTTGAAGAACAAATCAGATCGATATCAGCAACTTTAATCTATCAAGATGCAGAACTGGCCATTGGATGATAAAATTAGTAGGCCAGAACCAGCTGAGTTGTGTCATTGTATTTATTTTACTGATAGCAGGTGCCTATGGATGATAGTAGCACAAGTTTTGGACATAAATAACTAGCAATTTACCTGATACAACCAACAGTTCATATTGTACACACATTTTGAGTAAATGTAAATCAATTTGCGCCTCATTTTGATGTTCCCTAATAAGATGTACTTCTGTATGAAC</genome_strand>
        <mrna_strand>TTGAGCTGCCCGATGGGTCGGGCGTGGTTGTAACAATTGGGAAGTATGTCACACCAAATCACATGGATATTAATGGCAATGGAGTTGAACCAGATTTCAGGAATTTTCCTG................................................................................CTTGGAATGAAGTCAACAATCGTTTGTCAAAGTGCCACAAACAACAAGATGGATAAGGTAAGGGTTTCTATTTTCTTCTTCTTGTTTCTTTATTAACTTGTGGTTTCTTATCATGGCTCTTTCTGTCACATACAGCTCGCTCGTTTTCCTTTCAGTGTCATTCCGATTCATCATCATGACAGATGAATAACTTGGGGTAGTCCTTCGGTCGTGCAACACTCAGTTTGATATGATATTAACAGATGTTAACCTTCACAGTCGCTTAGCTTCACCCTTAGCCTGAGCATCACCAGGAAGAAACAAAGTACGTAATGCATACTCTTCTATTGCCTAGACATCCTCTTGAAGAACAAATCAGATCGATATCAGCAACTTTAATCTATCAAGATGCAGAACTGGCCATTGGATGATAAAATTAGTAGGCCAGAACCAGCTGAGTTGTGTCATTGTATTTATCTTACTGATAGCAGGTGCCTATGGATGATAGTAGCACAAGTTGTGGACATAAATAACTAGCAATTTACCTGATACAACCAACAGTTCATATTGTACACACATTTTGAGTAAATGTAAATCAATTTGCGCCTCATTTTGATGTTCCCTAATAAGATGTACTTCTGTATGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E278938" ref_strand="+" ref_description="SGN-E278938 [cLER-2-I18]">
      <seq>tgagctgcccgatgggtcgggcgtggttgtaacaattgggaagtgtgtcacaccaaatcacatggctattaatggcaatggagttgaaccagatttcatgaattctgctgcttggaatgaagtcaacaatcgattgtcaaagtgccacaaacaacaagatggttaccgtaagggtctctattttcatcttctagtttctttattaacttgacgtttcttatcatggctctttctgtcacatacagctcgctcgttttacttacagtgacattccgattgatcatcatgacagatgaataacttggtgtagaccttatgtcgtgcaacactcagtttgatatgatattaacagatgttgaccttcacagtcgcttagcttcacccttagcctgagcatgaccagcaataaacatagcacgtaatgcatactcttctattgcctagacatcctcttgaagaacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="101805" stop="100663"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101505" g_stop="101396" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101395" i_stop="101316" i_length="80">
            <donor d_prob="0.998" d_score="0.92"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101315" g_stop="100963" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="463" r_length="353" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-E278938" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>463</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E278938" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101505" e_stop="101396"/>
          <exon e_start="101315" e_stop="100963"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGCTGCCCGATGGGTCGGGCGTGGTTGTAACAATTGGGAAGTATGTCACACCAAATCACATGGATATTAATGGCAATGGAGTTGAACCAGATTTCAGGAATTTTCCTGGTAAGATGCTCCTATTCACATCATTACATGTGTCAACAGCATTCTGTTTCTCTGAATATAAAACTATATAATATTTGCAGCTTGGAATGAAGTCAACAATCGTTTGTCAAAGTGCCACAAACAACAAGATGGATAAGGTAAGGGTTTCTATTTTCTTCTTCTTGTTTCTTTATTAACTTGTGGTTTCTTATCATGGCTCTTTCTGCCACATACAGCTCGCTCGTTTTCCTTTCAGTGTCATTCCGATTCATCATCATGACAGATGAATAACTTGGGGTAGTCCTTCGGTCGTGCAACACTCAGTTTGATATGATATTAACAGATGTTAACCTTCACAGTCGCTTAGCTTCACCCTTAGCCTGAGCATCACCAGGAAGAAACAAAGTACGTAATGCATACTCTTCTATTGCCTAGACATCCTCTTGAAGAACAA</genome_strand>
        <mrna_strand>TGAGCTGCCCGATGGGTCGGGCGTGGTTGTAACAATTGGGAAGTGTGTCACACCAAATCACATGGCTATTAATGGCAATGGAGTTGAACCAGATTTCATGAATTCTGCTG................................................................................CTTGGAATGAAGTCAACAATCGATTGTCAAAGTGCCACAAACAACAAGATGGTTACCGTAAGGGTCTCTATTTTCATCTTCTAGTTTCTTTATTAACTTGACGTTTCTTATCATGGCTCTTTCTGTCACATACAGCTCGCTCGTTTTACTTACAGTGACATTCCGATTGATCATCATGACAGATGAATAACTTGGTGTAGACCTTATGTCGTGCAACACTCAGTTTGATATGATATTAACAGATGTTGACCTTCACAGTCGCTTAGCTTCACCCTTAGCCTGAGCATGACCAGCAATAAACATAGCACGTAATGCATACTCTTCTATTGCCTAGACATCCTCTTGAAGAACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E331479" ref_strand="+" ref_description="SGN-E331479 [cTOD-9-I13]">
      <seq>aacgagggggaggaggtgtatgagaaaaacactgaagtatccaaagtggcgagcaatgaaaacattgtggaataagcttggcagattgtcaatgacagctttcttaacaccatcgatcgccgatcttggtctcctaaatcgtggcttcaaaagaaagatgacatcttaagttcatcaattcatacaaggtcaaaagcacatgatatcatcaagcgtatgttggctagcttgggtgacccctatacacggtttgtttctcctgaacagatggctatatatgatatgactgggattggagtttacctcacggatgttccacatggcaatggaggttcaaaactgaaggttttagggctcctattggatggccctgcccataatgccggtgtacgacagggagatgaactgatatctgtgaatggggtggatgtgcacggtaaatcttactttgaagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="109132" stop="105332"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108832" g_stop="108686" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="147" r_length="147" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108685" i_stop="107279" i_length="1407">
            <donor d_prob="0.989" d_score="0.92"/>
            <acceptor a_prob="0.933" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107278" g_stop="107159" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="267" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107158" i_stop="106473" i_length="686">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.078" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106472" g_stop="106344" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="396" r_length="129" r_score="0.969"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="106343" i_stop="105692" i_length="652">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="105691" g_stop="105632" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="456" r_length="60" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-E331479" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>456</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331479" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108832" e_stop="108686"/>
          <exon e_start="107278" e_stop="107159"/>
          <exon e_start="106472" e_stop="106344"/>
          <exon e_start="105691" e_stop="105632"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACGAGGGGGAGGAGGTGTATGAGAAAGACACTGAAGTATCCAAAGTGGTGAGCAATGAAAACATTGTGGAAGAAGCTTGGCAGATTGTCAATGACAGCTTTCTTAACACCAGCGATCGTCGTTCTTGGTCTCCTGAATCGTGGCTTGTAAGATGTTGTTTTTCTCTTAAAAAACAAGAAAATTTAACTTTTTTGAGCTAAAGGGGTTCTTTTGCATATCAATTCTTGATAGCTATCTCATTGATTGTTTGGTATTTTGCTACCAGAGAATATGCTCTATTTATTTCATTCTAATTGTAGCTTCTTTTTTTCTTTTTAGCTCTAGGGGTTCTCTTGCATATCAATTATTGTTTGGTATTTTGCTGAAAATATGCACTATTTCGTTCTAAGTGTAGAATCTTTTTTTTACCTTTTAGCTGAAGGGTTCTCTTGCATATCAATTATTGAGAGGTATCTCATATCTGGTTGATTGTTTCGTATTCTGCTGCCAGAGAATATGCTCTATTTCATTCTAAATATGGAACTATTCCTTCTTTTAGCTTAAGGGGTATTGAATTTGATGGTTTGCTTAGATCATCTACTTAGCTTGTAAAAATACATACTTGGAGCATATTTAGTATACTATTACTAGGAGAATATATTTAATTTCATTCTATATGTATATTGGAATTCCTTTTATGGATTTAAATCTCTACTGGAAAATTCTCATCCAACATGGCAAAAGAGATGCTCTTAGCAATTTGGTGGGGGCTGGAGGTTAAGATCCATATTGAAATGTTCCCTGAAAATGCTGATTAGCTCTGTTGGTGGGGCAGGAATAAACGTATATTTCGTAAAATAACAGGAATTCTTTTTGGATTGTGTTAGCTACTTATCTTTACTGTAGGGTCATTGTAATGGATGCCTCGAATGAAATCAGCTACTTCATCAAAAATATTCGTATCATCATTAAAGCCATATGATTTTCTGGATTTGGAGGAATAACAAAAATTATTTCTAAGAACATTGAAGTAGAAAATGTCAAACTAATTGTTGGAGGCATGGACTTAACGTGATGTGTAGTTTAACAAGGAAAACATCATGCATTGTTGGAATTGAGATTAATTAGTAGTCGGATTCTTGAAAATTGATGACTGAATATAATGTCAAATATTTTATAATACTGAAGAGATTTTAGTTTCTTTCTACTGTAGATAGTGCACTTAACTAGGATATGTAGTAATAGTGGCGGAATATAAGTCTTTCACCTAACTGCTCAGCAAGTCTGATGCAGTAAAGCGCATGGTGAAAAAAATTCTAATTTTGTTGCTCAGCATGTCTAATGTGGATAAAAATGTGATAAATGAACCAGTGGAAGCATTTTGCTAGCACTACATCATGTCTTTTCGAAAAGATCTGAGCCTTTTATGTCTCTGCTGACATCTTTTTTCTCCCTGGGTTCTTGCCTTCTCTTCATCCTACCTAGATCATTGCTCTCCCTATCATATTCTTTTGTATTGATATCAACTTAGAAGTATTCATGACTAAATATTTCGTTTTCTATGTTATTACCAGCAAAAGAAAGATGACATCTTAAGTTCATCAATTCAGACAAGGTCAAAAGCACATGATATCATCAAGCGTATGTTGGCTAGCTTGGGTGACCCCTATACACGGTTTCTTTCTCCTGAACAGGTAATAAGTCCTCTTTACATCAATATTTACGTCTGTATTGTTGAATTTGGTATGTATGTTTAAATTAGCATACAATTTTTAGAGGAAGACAGGATGTCTACCACATGGGAATACAAATCTTTTTTGGTTCGGTTCGTTACATAGGACTAGAAATTTTATTTCCGAGTTTAAACATTGCAAAGAGTGAAGCAATTTGGACGTATTCTTTCGTTTATAGGTTGATATAAATGTACTAGGGAAGTTTGGAAGAGGTTCGACGCTTCTTCGTTAGCATTAGTGATTTGAAGTTCCTTTACTTCTTTACATTATGTTCTCAATTTCTCTTTTTATGATTCCAATATATGTATGTATTATTAACCGTCCTGAATCTGTACGGATCTTTCATCTCATCCTCCTGCATTATCATCTTTCCATTTAATTGGATGAAACACAAATTGATGAAGCCATATGTTGTAGAGACGATAGTACTTCTCTACTTTCAGTTAAGAATGGGTATTGTATCGTACGTCATGAGATATATGATTTCTATTGATTCCTTCTTTTTTCAGTGTATCTTGCATTTCCTTAATTCAAATAAACGTCTTACTTACCAACTTTTTCCTTAATTCAAATAAACGTCTTACTTACCAACTTTCCAGTGTTCTTGTTCCATGAAATGTACTGCTTGTCATTGAAAGTTCTCCAAGATGGCTAGATATGATATGACTGGGATTGGAGTTAACCTCAGGGATGTTCCAGATGGCAATGGAGGTTCAAAACTGAAGGTTTTAGGGCTCCTATTGGATGGCCCTGCCCATAATGCCGGTGTACGACAGGTATGTCATTTACAGTCATTTACTAACAAAAGCACTTCCCTTATTTATTTTGCTTAGCTTTATGCAGTGGTTCTTTTCTTTTCCCTGTTGATGAAATGCTTAATATCTCGGTTATTGTAGTCATGATTACTTGATAATGCCAACAGTAGGGAATTTGTCTTTGTTATTTATGAATACGATTGAAAAAGGAGAGATAAGCTTTAAACTGGCAAACTAATGGCCTCTGATTCAATATAATTTTCCCTCAAGGTGTCCAGTCCTTCTCACCACACATACTTGGGGCCTTGCCTGTTAGTTTCGCAGGTGTCTTGTACTGCTTGATGGCTTATGATATATTTTAAGTGATGGAATTTTTCCATAGCTAAATATGTAGACCGCATGAAGATGTGTTATTTTGAAATGCTTACTTGAGACGAGGGTTTATCGGAAACAACCTCTCTACCTTCACAGGGTACGGATTCATTGGGTATGTTGTTGTTGCATGAACATGTGCTATTTTGGCTGCAATTGAGTATAACATTAGCACATACTACTTCTTTACATTTTCTCTCCCCACTGAAAGTATCTGGGTTCACTTCAGTTTTCCCTATTCTAGTTTGATTTACCATTCAGTGAAAAATTAACATGTATCTTTCATGTGAACTCGTGGCAGGGAGATGAACTGATATCTGTGAATGGGGTGGATGTGCTGGGTAAATCTTCCTTTGAAGCA</genome_strand>
        <mrna_strand>AACGAGGGGGAGGAGGTGTATGAGAAAAACACTGAAGTATCCAAAGTGGCGAGCAATGAAAACATTGTGGAATAAGCTTGGCAGATTGTCAATGACAGCTTTCTTAACACCATCGATCGCCGATCTTGGTCTCCTAAATCGTGGCTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAGAAAGATGACATCTTAAGTTCATCAATTCATACAAGGTCAAAAGCACATGATATCATCAAGCGTATGTTGGCTAGCTTGGGTGACCCCTATACACGGTTTGTTTCTCCTGAACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCTATATATGATATGACTGGGATTGGAGTTTACCTCACGGATGTTCCACATGGCAATGGAGGTTCAAAACTGAAGGTTTTAGGGCTCCTATTGGATGGCCCTGCCCATAATGCCGGTGTACGACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGATGAACTGATATCTGTGAATGGGGTGGATGTGCACGGTAAATCTTACTTTGAAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E331341" ref_strand="+" ref_description="SGN-E331341 [cTOD-9-G21]">
      <seq>tccaaagtggtgagcaatcaaaacattgcggaagaagcttggcagattgtcaatgacagctttcttaacaccagcgatcgtcgatcttggtctcctgaatcgtggcttcaaaagaaagatgacatcttaagttcatcaattcagacaaggtcaaaaacacatgatatcatcaagcgtatgttggctagcttgggtgacccctatacacggtatctttctcctgaacagatggctagatatcatatgactgggattggagttaacctcacggatgttccacatggcaatggaggttcaaaactgaaggttttagggctcctattgtatggccctgcccataat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="109093" stop="106059"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108793" g_stop="108686" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="108" r_length="108" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108685" i_stop="107279" i_length="1407">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.933" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107278" g_stop="107159" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="228" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107158" i_stop="106473" i_length="686">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.078" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106472" g_stop="106359" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="342" r_length="114" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-E331341" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>342</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331341" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108793" e_stop="108686"/>
          <exon e_start="107278" e_stop="107159"/>
          <exon e_start="106472" e_stop="106359"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAAAGTGGTGAGCAATGAAAACATTGTGGAAGAAGCTTGGCAGATTGTCAATGACAGCTTTCTTAACACCAGCGATCGTCGTTCTTGGTCTCCTGAATCGTGGCTTGTAAGATGTTGTTTTTCTCTTAAAAAACAAGAAAATTTAACTTTTTTGAGCTAAAGGGGTTCTTTTGCATATCAATTCTTGATAGCTATCTCATTGATTGTTTGGTATTTTGCTACCAGAGAATATGCTCTATTTATTTCATTCTAATTGTAGCTTCTTTTTTTCTTTTTAGCTCTAGGGGTTCTCTTGCATATCAATTATTGTTTGGTATTTTGCTGAAAATATGCACTATTTCGTTCTAAGTGTAGAATCTTTTTTTTACCTTTTAGCTGAAGGGTTCTCTTGCATATCAATTATTGAGAGGTATCTCATATCTGGTTGATTGTTTCGTATTCTGCTGCCAGAGAATATGCTCTATTTCATTCTAAATATGGAACTATTCCTTCTTTTAGCTTAAGGGGTATTGAATTTGATGGTTTGCTTAGATCATCTACTTAGCTTGTAAAAATACATACTTGGAGCATATTTAGTATACTATTACTAGGAGAATATATTTAATTTCATTCTATATGTATATTGGAATTCCTTTTATGGATTTAAATCTCTACTGGAAAATTCTCATCCAACATGGCAAAAGAGATGCTCTTAGCAATTTGGTGGGGGCTGGAGGTTAAGATCCATATTGAAATGTTCCCTGAAAATGCTGATTAGCTCTGTTGGTGGGGCAGGAATAAACGTATATTTCGTAAAATAACAGGAATTCTTTTTGGATTGTGTTAGCTACTTATCTTTACTGTAGGGTCATTGTAATGGATGCCTCGAATGAAATCAGCTACTTCATCAAAAATATTCGTATCATCATTAAAGCCATATGATTTTCTGGATTTGGAGGAATAACAAAAATTATTTCTAAGAACATTGAAGTAGAAAATGTCAAACTAATTGTTGGAGGCATGGACTTAACGTGATGTGTAGTTTAACAAGGAAAACATCATGCATTGTTGGAATTGAGATTAATTAGTAGTCGGATTCTTGAAAATTGATGACTGAATATAATGTCAAATATTTTATAATACTGAAGAGATTTTAGTTTCTTTCTACTGTAGATAGTGCACTTAACTAGGATATGTAGTAATAGTGGCGGAATATAAGTCTTTCACCTAACTGCTCAGCAAGTCTGATGCAGTAAAGCGCATGGTGAAAAAAATTCTAATTTTGTTGCTCAGCATGTCTAATGTGGATAAAAATGTGATAAATGAACCAGTGGAAGCATTTTGCTAGCACTACATCATGTCTTTTCGAAAAGATCTGAGCCTTTTATGTCTCTGCTGACATCTTTTTTCTCCCTGGGTTCTTGCCTTCTCTTCATCCTACCTAGATCATTGCTCTCCCTATCATATTCTTTTGTATTGATATCAACTTAGAAGTATTCATGACTAAATATTTCGTTTTCTATGTTATTACCAGCAAAAGAAAGATGACATCTTAAGTTCATCAATTCAGACAAGGTCAAAAGCACATGATATCATCAAGCGTATGTTGGCTAGCTTGGGTGACCCCTATACACGGTTTCTTTCTCCTGAACAGGTAATAAGTCCTCTTTACATCAATATTTACGTCTGTATTGTTGAATTTGGTATGTATGTTTAAATTAGCATACAATTTTTAGAGGAAGACAGGATGTCTACCACATGGGAATACAAATCTTTTTTGGTTCGGTTCGTTACATAGGACTAGAAATTTTATTTCCGAGTTTAAACATTGCAAAGAGTGAAGCAATTTGGACGTATTCTTTCGTTTATAGGTTGATATAAATGTACTAGGGAAGTTTGGAAGAGGTTCGACGCTTCTTCGTTAGCATTAGTGATTTGAAGTTCCTTTACTTCTTTACATTATGTTCTCAATTTCTCTTTTTATGATTCCAATATATGTATGTATTATTAACCGTCCTGAATCTGTACGGATCTTTCATCTCATCCTCCTGCATTATCATCTTTCCATTTAATTGGATGAAACACAAATTGATGAAGCCATATGTTGTAGAGACGATAGTACTTCTCTACTTTCAGTTAAGAATGGGTATTGTATCGTACGTCATGAGATATATGATTTCTATTGATTCCTTCTTTTTTCAGTGTATCTTGCATTTCCTTAATTCAAATAAACGTCTTACTTACCAACTTTTTCCTTAATTCAAATAAACGTCTTACTTACCAACTTTCCAGTGTTCTTGTTCCATGAAATGTACTGCTTGTCATTGAAAGTTCTCCAAGATGGCTAGATATGATATGACTGGGATTGGAGTTAACCTCAGGGATGTTCCAGATGGCAATGGAGGTTCAAAACTGAAGGTTTTAGGGCTCCTATTGGATGGCCCTGCCCATAAT</genome_strand>
        <mrna_strand>TCCAAAGTGGTGAGCAATCAAAACATTGCGGAAGAAGCTTGGCAGATTGTCAATGACAGCTTTCTTAACACCAGCGATCGTCGATCTTGGTCTCCTGAATCGTGGCTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAGAAAGATGACATCTTAAGTTCATCAATTCAGACAAGGTCAAAAACACATGATATCATCAAGCGTATGTTGGCTAGCTTGGGTGACCCCTATACACGGTATCTTTCTCCTGAACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCTAGATATCATATGACTGGGATTGGAGTTAACCTCACGGATGTTCCACATGGCAATGGAGGTTCAAAACTGAAGGTTTTAGGGCTCCTATTGTATGGCCCTGCCCATAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E745640" ref_strand="+" ref_description="SGN-E745640 [GI|47105230]">
      <seq>ggacccaaaaaaccctaaactataacagatctgaaacaagaaaatattttgtgggtctttcttgtttttttcctctctttttttttagagaaaaagagttgtcttcttcaaagatgagtagcagaaacaatggtggagttggggtacaatcgatacccgcagggtcaagaaagatggtacaaagcttaaaggagatagttaactgtcctgaacctgagatctatgctatgctcaaagaatgtaatatggaccccaatgaagctgtcaataggcttcttactcaagatacttttcatgaggtgaagagcaaacgtgaaaagagaaaagagagtaaggatacgactgaatctaggccacgtggtgcaattagcaactcaggccgtggtagcaggggaggtgcagaacgatatgttgggcgcggtgggtcagccgagtctaccaagcttattcctggatacagaaaagataatggatcaaagacgagtaacctgacttctactctaggagtttccggaataagcaggagggccacaacaatcagtgatattgctgcaaatgaaagtaaaaagtcagcacctgcagcagttgatggtgtttcatcagtctcacagcatgagacttcttctggatatcaacctacttggggtggggtgcccggtcaagtttccatggctgatattgtgaagatgggtaggccacagagcaaagtgccaagtgcacctagtgtatctcaccacaatgtcaatgccgagcaaaaccatattcaggggctcccttctggtgcatcacatcaaaatactcagtggtctgatgatcatactaccaaaatttctgaggtacaccgagagccacaacatctttcaactgatgaggaatggcctctaattgagccgccatcagttgctagtcagacatctatctcagagcctcctgctgattcggagctgcatcctgatccaactaacatgtcatatgacagaattaatcatcaaaatgagattgatgaagttcaggggacagataactgcacgattgaaaatcttggtagtccttcaagcagaaggttgcaggaggataatgctggaggtgcatctatttatgagaatgacctctacggatatcagaaccagaatcatacctttgaccatcaacaagctgaggatgttaacaactctgtttcatcagtttctgcaaacttgcaacagttaaatgtacaagatgatggaggggtgccacctgagggagatggtccttctgttgtaataccagaccatcttcaagttcaaactgcagactgctcacacctgagctttggtagctttggctctggtattggtggctccttttctgggcctttggcatctgctccagtgactagtactttggaagatgcacctaaggaagtggatggttcatcagttgggcacttgggatccagagcttcagaatactatggtgatgagtctctcagacatgcatctgagagtaacttataccatagaactaatgcaagttctgtaaattacgattcacctgcttcacaaccagaacctttgaaatcagaaacaaatgaacaaggaaatcaatattcgtatccctcttctgctgctggctacacatatgaaagtgcacaacaattaactgcagcatttagtcagccacagacaagttcccagatgcaaaatctcactcctttctctaatgtaatggctttcacaaattcattgcctagcaccttgttggctgctattgctcatgctggtcgtgaaactgatctttcatacttacctttttctgcaacacaagcaatggctatgaaatatggcagctctgtttcttcaattggtggttcaacaatttccatgcctgagtctttgaagggtgctggttttccatcagcacagcctacacagcagccactttctggaactagtgtcaccactggacctactgtgccgcaacatcttgctgtgcatccatataaccaaccacctctgggaccatttgctaacatgataggttatccctttttgcctcagagttatacatatatgccatctgcattccagcaaccatttgctggtaacagtaattatcatcagtcactggcggcggtgcttcctcaatataagaacagtgtgtcagtcagcagcttacctcagccagccagtgttgcttctgcgtatggtggttttggaaatacagcaagtatccctggtaacttcccaatgaatccccctgctgctccctctggtactaacttgagttacgatgatgtgttgagctctcagtacaaggataccaatcatttaatgtctcttcagcagagcgagaactcagctatgtggcatggacccggttcaaggacaatgtcagctgttcctgctaacacatattatggttttcaaggtcaaaaccagcaaagtagtggatttaggcaagctcaacagccgctgcaaaatcatggatccttggggtacccaaatttctaccattctcaggcggggatctcattagaacatcaacaacaaaatccgagggatgggtcattgggtggtggatctcaaggccagccaaagcagtttcaacagctatggcaaagtggcggctactaatctcttactgcctccttcttttttggagtcttgtaatgagtgtgaaagtggctatagggtgttgctttggaagcaactagaatgcacaatcaattggatgcttacctgtgcctcaaggttgtactttacatgtttgtcatcagtcaaatgtaacgtaggatgtgagctaacgtcgtgctagtggacttgtcttctgtttcatcaactctttgttacacagttaaccccatggtttctttattaatagtgagaagtgttctgtcttaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="111531" stop="120377"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111830" g_stop="112114" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="285" r_length="285" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="112115" i_stop="112974" i_length="860">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="112975" g_stop="113018" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="329" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="113019" i_stop="113505" i_length="487">
            <donor d_prob="0.720" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="113506" g_stop="113605" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="429" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="113606" i_stop="113717" i_length="112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.484" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="113718" g_stop="113829" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="541" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="113830" i_stop="114418" i_length="589">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="114419" g_stop="115032" g_length="614"/>
          <reference_exon_boundary r_type="cDNA" r_start="542" r_stop="1155" r_length="614" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="115033" i_stop="116098" i_length="1066">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="116099" g_stop="116381" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="1156" r_stop="1438" r_length="283" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="116382" i_stop="117068" i_length="687">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="117069" g_stop="117339" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="1439" r_stop="1709" r_length="271" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="117340" i_stop="117751" i_length="412">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="117752" g_stop="117913" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1710" r_stop="1871" r_length="162" r_score="0.994"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="117914" i_stop="118802" i_length="889">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="118803" g_stop="119258" g_length="456"/>
          <reference_exon_boundary r_type="cDNA" r_start="1872" r_stop="2327" r_length="456" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="119259" i_stop="119525" i_length="267">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.741" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="119526" g_stop="120073" g_length="548"/>
          <reference_exon_boundary r_type="cDNA" r_start="2328" r_stop="2875" r_length="548" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2881" polyA_stop="2896"/>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E745640" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2875</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E745640" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111830" e_stop="112114"/>
          <exon e_start="112975" e_stop="113018"/>
          <exon e_start="113506" e_stop="113605"/>
          <exon e_start="113718" e_stop="113829"/>
          <exon e_start="114419" e_stop="115032"/>
          <exon e_start="116099" e_stop="116381"/>
          <exon e_start="117069" e_stop="117339"/>
          <exon e_start="117752" e_stop="117913"/>
          <exon e_start="118803" e_stop="119258"/>
          <exon e_start="119526" e_stop="120073"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACCCAAAAAACCCTAAACTATAACAGATCTGAAACAAGAAAATATTTTGTGGGTCTTTCTTGTTTTTTTCCTCTCTTTTTTTTTAGAGAAAAAGAGTTGTCTTCTTCAAAGATGAGTAGCAGAAACAATGGTGGAGTTGGGGTACAATCGATACCCGCAGGGTCAAGAAAGATGGTACAAAGCTTAAAGGAGATAGTTAACTGTCCTGAACCTGAGATCTATGCTATGCTCAAAGAATGTAATATGGACCCCAATGAAGCTGTCAATAGGCTTCTTACTCAAGGTCTACCATAAACCCTAAATCTTTAATTTCCTTTTTTTTTTGGTGGGTTTCGGGTTTTAGGGTTTTTTATGTTTTGGGAAAAAATTGAATAAAGGTACTGTTTTTATAGATAGAAACAAGAAACAAAAGAAAATCTGTAATAATACTTCTTTTCTTGATATTGGGTGTTAGAAGCTGTTTTTTGTAAGGAGAAGAATGAGAAAAGATTTGATTTTTATGCTATATAGTTAGTTCAAGATTTATTGTAAGGTATCTTAATGGATTGAGCATGCAGATATTTCATTGATTGTGACTTTAGAAAATGAAGAGAAGACAAAACTAGGGTCTTTAGGGATTTTGTTAATCAGATTACTAGGATTCTCTTTTTAATGCACTTTGTGTTAGTTCTTGTATTAGATTTCTTAGGTTTACAATTACTCTTCTTTTACTATCTCTGGCCACTGATTTTCATCTACATGTTAATGGGACTTCCATTTCTTCCTTTGTGTGCGAGTTGTCTTATTTGGTAGCCTTTTCTTGGACTTTTGAATTAATGTTGTTGGGATTTCGGTGGTACAAGTACTGAATTCCATGTTAGTTATCCGTTTTCCAGAAATGCACGCTTTACTTTGAAGAAGCATGAGTTTGCTTTTCGTTTCTCTCTTAAAGCCTCAAGAACTTATATTTTGTGCTTTTCACTTTTAGAACGTTAGCTACTGCAGTCATGTTTGCCTTCCTCTGTGCTCTTCTATGTTGTACTTGTACTTGAAGGTTATAGTATTTTTAGTTCTTGATAGAATGGTCTGCCATTCCATTGGATGGTGACCTTAGTTTGTGATTAATTTTGATCACCTTCTAATTATAGTTTATTGATTGGCTAGATACTTTTCATGAGGTGAAGAGCAAACGTGAAAAGAGAAAAGAGGTTCGTAATTTTTACTTAAAGCGGGATTTTAGAGACAAATTGGTTATGGCGATCTGATTTTAACTTTCTCGTTCTTAATACTGCCTGTTTCTGTTGTAATTTACTATATGATACGAGATTACGGAAAATTAGTCTACTCAGATCTCTTATTACCTTGGCTCGATGATTAACTTCTGATGAAATTCTGAATATTTCTACGGTGAAAACAAAAGTATAAAGTGAAAGATTCTCTGTTTGGAAATTTGTTCAGTAGAGGTTCTTTTTAGTAGGCACCCCATTATTTTGATATTCCAATTTCTCTTTCTGTTTATACTGATAAATTATGGTGCCTTATTCTTTTCAAATAATATGGTGTTTCCTCTTGATATGTTTTACGTCTTATTGGTTAATGCATGATCTAGCAGAATATTACAAGGTGTTACTATGTTACTTTCTTAAATGGCTTGTTCATTTTTTCATTCTTCACTCATAATTATCTTTGGTTCAGAGTAAGGATACGACTGAATCTAGGCCACGTGGTGCAATTAGCAACTCAGGCCGTGGTAGCAGGGGAGGTGCAGAACGATATGTTGGGCGCGGTGGGTCAGGTATGTACATGATAATGTACACTCTTTTCAAACATAATCATGTCTTAAGTTTTGCATAGTTCATCGTGTCATCTCATGAGGGTATCGTCTTGTTTCTATATACCCTTTCCAGCCGAGTCTACCAAGCTTATTCCTGGATACAGAAAAGATAATGGATCAAAGACGAGTAACCTGACTTCTACTCTAGGAGTTTCCGGAATAAGCAGGAGGGCCACAACAATCAGGTTAGTTGTTTCAAGTTTCAACTTCATAAATAGTTTAGGTTCTCTCAAAAATACATCAGTTGCACATCAGTTGCCTGTAGATGTTTGTCTTTCTTTTTTCCGTAGAGTATTCTGTAGTACCACAGTATGTTTCTTTTTATTGAAGTGTCTTTGGCAGTAATATAATTAACTTAGTAATTACAATCAGTAATCCCTGTATTGGATTAAGCTAAGACTTTTCATGCACTTCAATAATCACGCAATGTGAGCTATTCTCAAAATGCATGTGACAAAGCACAATAAGGGAAAGGTTTTTTTTTTCCAAATCCTAGTTTGACTGTTTGATCCTTAGCGCAAGCGCTAAGTGAGCAAGCTACCACTCTGTGGGGTAAAAACCGTGGAAAATAAAGAATGTCAAGTAGAAAGGAACAAGGTCTTACGGCTACTAATAAGGGGGTTGGGGTTTGACAATAAAAGACTGGGGCTTGTTTAGCCGCCTAGGTAGTAAGAAAAACTCTGAGTTTGACATTAATAGCCATAGTGAGTTCATCTTTGAGGGGCTTTTGGGAGATGCATAACAGTGTTCTCAATGCTGTGATATGTGTAACAGTGATATTGCTGCAAATGAAAGTAAAAAGTCAGCACCTGCAGCAGTTGATGGTGTTTCATCAGTCTCACAGCATGAGACTTCTTCTGGATATCAACCTACTTGGGGTGGGGTGCCCGGTCAAGTTTCCATGGCTGATATTGTGAAGATGGGTAGGCCACAGAGCAAAGTGCCAAGTGCACCTAGTGTATCTCACCACAATGTCAATGCCGAGCAAAACCATATTCAGGGGCTCCCTTCTGGTGCATCACATCAAAATACTCAGTGGTCTGATGATCATACTACCAAAATTTCTGAGGTACACCGAGAGCCACAACATCTTTCAACTGATGAGGAATGGCCTCTAATTGAGCCGCCATCAGTTGCTAGTCAGACATCTATCTCAGAGCCTCCTGCTGATTCGGAGCTGCATCCTGATCCAACTAACATGTCATATGACAGAATTAATCATCAAAATGAGATTGATGAAGTTCAGGGGACAGATAACTGCACGATTGAAAATCTTGGTAGTCCTTCAAGCAGAAGGTTGCAGGAGGATAATGCTGGAGGTGCATCTATTTATGAGAATGACCTCTACGGATATCAGAACCAGAATCATACCTTTGACCATCAACAAGGTTAGTATATTACAGTTTTTATTTGGTAATGATATGCATTTCATTGGTGAGAATATGTAGTATTTGTTGTCAAGTAGCTTGTGTAATGTTTTTTTTTGACATGGCACTGTTAATTTTTGTTTTTTTCCACGAGTTCCAGGCATTGGCAAGTCTTTAGTTCCAGTAAACTAAAGATTCTCTCTATCCCCATTCTACAATAAGTAATCATTACATGTTTCATAGAGCAACTATACTGGCACTTAGCTTTTTAGGAATGCAGTTTTAGAACCGAAGGTTTTATATCATACCACCAGTTTAGCTTAAATAAGCTGGACATTTAGTTATGGCTCTTGAATACATGGGTGTTCAATATGCGGAGTGGGACATATAGCAGCAGTGGAGGGCAACAGGGAATATCATCTTAACTGCATCCAAAGCTCTTTCTTACTGTATTTGGAGCTTCAATGTGATTTTACTGCTTTTCATTTTGTTTTATCTTGTCACTTTGATGATAATGTAGCATAGAAAACACTCCTCACAGCTTTTTGTTTGTCTTAGATTTTTTTAATAGGAATTTAAACAATCATTTTTTCTGCAATTTGTTTATTTTGGTATTATCAATGTTTTGTTAACTGTGGCTTAATACATTACTTGGTTGATTTACTGGGGCATCTGATAGATGTATAAAGAGGGAAGCCTTGAGTGCTGACTTTCTGCTCATACTCGTAGGTTGTGTCAACATGAGGTTATTGCAGATTAAGAGGTTCTTCTCATGAATTTTCAAATCTACCATGTGAAGTTGAAGCTTGATGTTCTTGCACATGGCTCCCATATTTGAAAGAGAAGAAAACCCTAACAAATATCAGGCCACGTAGAGACTACTCTGTTTTTGGGGGTGGTGGTGATGTTCATGGGAATTGAGATGTGCTAGTTAGGAGATAAATCAACCTGCTTTTCATGTCATTATTTAGTGGAAAAGCACTGTAGTTTTACTGCATAATCAAATTGTTAACATATGGAGTTCCGTTACTTATAAACTTTTGGAATGTTTATTTTTGTGTAATAATCCTATTTCATTGTCTTGCAGCTGAGGATGTTAACAACTCTGTTTCATCAGTTTCTGCAAACTTGCAACAGTTAAATGTACAAGATGATGGAGGGGTGCCACCTGAGGGAGATGGTCCTTCTGTTGTAATACCAGACCATCTTCAAGTTCAAACTGCAGACTGCTCACACCTGAGCTTTGGTAGCTTTGGCTCTGGTATTGGTGGCTCCTTTTCTGGGCCTTTGGCATCTGCTCCAGTGACTAGTACTTTGGAAGATGCACCTAAGGAAGTGGATGGTTCATCAGTTGGGCACTTGGGATCCAGGTAAGGCCTCCTTCTAACCTGTGGATTTTCTTCAACTCATTGATATTTTTTTTATCTAATTATATCAACATATAGTGTAGAAACTATGTTAACATTAACATGCCAAACTCTACTGGCGTTTCCCCTACCCGAGATATGTGGGCAATATAATGCAGAAATTATGTTATGTTAACATGCCAAAACTCTACTGGCATTTTCCCTACCTAGATTTGGGGGTAATTTGTTTTGCCTCTACTTTTTTTACTAAATAACTACAAATATCCTTGCATTTAGTATGTTTGTAGCAGGTTTGTTCTAAATGTTCATCATATTAGTCAATTAAATTAATCTTTACTATTCTAACATCCTAAACAGTTGGTATCTGTATGAATCCTCTGTGCCACCACTGTATTCAGATTCATTTCATTCCAGTCAAATAATTTATCATATAAGACAGGCGTGAAGCTATTCTCTGCCCTTTCCTACCAAAAAGTGATTTAAGACTAAGTTAGGACTTCTCTGAAGCTCACTAAACAGTACATTTTTAAACTTTTATCCTAACATTCCATGTTTTAAGTAAAAAATATCTTACAGGATAACGTTAGTCATCTTATATTCAGTTTCAAAAAAAAAACATTAGTCATCTTATTGAGGGTGTTCAACCTTGCAAGTATTCCTCTTAATTGTTAGTGCATCTTTATATTGCAGAGCTTCAGAATACTATGGTGATGAGTCTCTCAGACATGCATCTGAGAGTAACTTATACCATAGAACTAATGCAAGTTCTGTAAATTACGATTCACCTGCTTCACAACCAGAACCTTTGAAATCAGAAACAAATGAACAAGGAAATCAATATTCGTATCCCTCTTCTGCTGCTGGCTACACATATGAAAGTGCACAACAATTAACTGCAGCATTTAGTCAGCCACAGACAAGTTCCCAGATGCAAAATCTCACTCCTTTCTCTAATGTAATGGTAAGTTTCTTTCCTTGTGAAGGATGCAAATAGTTTCCCTGCTCTTCATTGGATGTTTGCGTGTGTGCATTTGCATAGCTCAAGTCTGAAGGTAATTGTACAGAGTATATTGGAGTGAATTCTACTTCTCCAAGGGGTTGTTTGGTAGAGTGCATAAGAATAATGTTAAATCCAGTGCATTAGTGATGCTTGTAAGTTATATCAGCAATGCATGAATTAGTTATGCTTGCATTAATTATACATAGATTATTTTTATGCATTGTTTGGTTTGATGCATTAAAATAGCATGCATTGCATAAAGAAATTTATTTACATAGATAGCCTCATCTAATATAAGTTACCATTCATTTGTTAGAGATCCTAAGACCAGAATTTTCTACATTGAGGTGCTCACTGCTATTGTTTTGAGCAGGCTTTCACAAATTCATTGCCTAGCACCTTGTTGGCTGCTAATGCTCATGCTGGTCGTGAAACTGATCTTTCATACTTACCTTTTTCTGCAACACAAGCAATGGCTATGAAATATGGCAGCTCTGTTTCTTCAATTGGTGGTTCAACAATTTCCATGCCTGAGGTAGTGCTATCCTGATGAAGCTAATTATTTCTTCATTGTGATTGTCAATTTCCTCATGTGCACTTGGTGTATTGCTCATGACCTGCTGGTTGTCAGTATTTTCATGTAATATAATAAGCAAAACATGTTCCTTTTTGTATTCTTTTTGAAGTAATTTTAATGATTCTAGTTGTTTATTTGTGCATGATGAAAAGTTTTACATAATGGATGTAGTTGCATCTTACACGTTTGGTATCTTTCAACATTGGGGAAGAAAGCTTCTGCTATTGAAAACTAAAAATTTGAATATTCTCTCTTGATGTCTATCCAAATGTTTTGAGGGCAGCAACTTTTTTTATTGTGTAAAATCTCTATAGTGGAAAGATGTATACAGAGAGAATAGTTACTCGTCATGGATTTCCACAGTAATTCAAGGCGCACTTGATGTATTTCTGTGTTACATTTTGGAGGCTCTTGCTTGTTAAGAGGAGGAAAGGAAAACCACCCTTTAAATTTAGAAAAAGGAGGCTGAAGTTGTGTGTGTAAATTCCTTATATTATTTTTTGGTTTTCTATGTTAAATAAATGTCAGTACCTTCTGGTTTTTGCATGTAAGATTCCTTTTGGGTTGTTGCAAAAGAAAAGAATGGGCACTCGGTTGTTAATAACCTGAAATTTAAAGATTCACAATAAAAACTGCTAAATTCGGTTGCTATAAGACCTACATAAGATTAATTCCTAAGAGGAGTGTAGGTCGAAAATCAGTTGACGAATGATATAAAAGCTGATGTATAAATCTATTATAGTTTTCCTTTATCATGGAGAAGTGCTGTAAGATGGGACAGATTTTCTATCATCTTCTTTCTTTCTAGAGTTTTTGTGTACATGATTGATTTTTTCTTGACTTGCAGTCTTTGAAGGGTGCTGGTTTTCCATCAGCACAGCCTACACAGCAGCCACTTTCTGGAACTAGTGTCACCACTGGACCTACTGTGCCGCAACATCTTGCTGTGCATCCATATAACCAACCACCTCTGGGACCATTTGCTAACATGATAGGTTATCCCTTTTTGCCTCAGAGTTATACATATATGCCATCTGCATTCCAGCAACCATTTGCTGGTAACAGTAATTATCATCAGTCACTGGCGGCGGTGCTTCCTCAATATAAGAACAGTGTGTCAGTCAGCAGCTTACCTCAGCCAGCCAGTGTTGCTTCTGCGTATGGTGGTTTTGGAAATACAGCAAGTATCCCTGGTAACTTCCCAATGAATCCCCCTGCTGCTCCCTCTGGTACTAACTTGAGTTACGATGATGTGTTGAGCTCTCAGTACAAGGATACCAATCATTTAATGTCTCTTCAGCAGGTACCCATTTCATTTGCTTTAACAGCTGTTCAATTCTTTGAAGTCAATAGTATACTGCAAAATTGCTGTTGATTCTACCTTACTACTCTAATATAATAGGTTGATATATTTCTAAATTGGACAAATAGTTTCTATAGCACTGCTTTTTTCTGGTTAATTTCTTGTGCTAGCTGTATTCTATTGTTTGAGCTTTTGCTCATCAATCCATCCTTCCTTTCCTTGAATTGAAGGCAGCTCATGTATATGCTCATTATTCCTTCCTTTCAGAGCGAGAACTCAGCTATGTGGCATGGACCCGGTTCAAGGACAATGTCAGCTGTTCCTGCTAACACATATTATGGTTTTCAAGGTCAAAACCAGCAAAGTAGTGGATTTAGGCAAGCTCAACAGCCGCTGCAAAATCATGGATCCTTGGGGTACCCAAATTTCTACCATTCTCAGGCGGGGATCTCATTAGAACATCAACAACAAAATCCGAGGGATGGGTCATTGGGTGGTGGATCTCAAGGCCAGCCAAAGCAGTTTCAACAGCTATGGCAAAGTGGCGGCTACTAATCTCTTACTGCCTCCTTCTTTTTTGGAGTCTTGTAATGAGTGTGAAAGTGGCTATAGGGTGTTGCTTTGGAAGCAACTAGAATGCACAATCAATTGGATGCTTACCTGTGCCTCAAGGTTGTACTTTACATGTTTGTCATCAGTCAAATGTAACGTAGGATGTGAGCTAACGTCGTGCTAGTGGACTTGTCTTCTGTTTCATCAACTCTTTGTTACACAGTTAACCCCATGGTTTCTTTATTAATAGTGAGAAGTGTTCT</genome_strand>
        <mrna_strand>GGACCCAAAAAACCCTAAACTATAACAGATCTGAAACAAGAAAATATTTTGTGGGTCTTTCTTGTTTTTTTCCTCTCTTTTTTTTTAGAGAAAAAGAGTTGTCTTCTTCAAAGATGAGTAGCAGAAACAATGGTGGAGTTGGGGTACAATCGATACCCGCAGGGTCAAGAAAGATGGTACAAAGCTTAAAGGAGATAGTTAACTGTCCTGAACCTGAGATCTATGCTATGCTCAAAGAATGTAATATGGACCCCAATGAAGCTGTCAATAGGCTTCTTACTCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTTTTCATGAGGTGAAGAGCAAACGTGAAAAGAGAAAAGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAAGGATACGACTGAATCTAGGCCACGTGGTGCAATTAGCAACTCAGGCCGTGGTAGCAGGGGAGGTGCAGAACGATATGTTGGGCGCGGTGGGTCAG................................................................................................................CCGAGTCTACCAAGCTTATTCCTGGATACAGAAAAGATAATGGATCAAAGACGAGTAACCTGACTTCTACTCTAGGAGTTTCCGGAATAAGCAGGAGGGCCACAACAATCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATATTGCTGCAAATGAAAGTAAAAAGTCAGCACCTGCAGCAGTTGATGGTGTTTCATCAGTCTCACAGCATGAGACTTCTTCTGGATATCAACCTACTTGGGGTGGGGTGCCCGGTCAAGTTTCCATGGCTGATATTGTGAAGATGGGTAGGCCACAGAGCAAAGTGCCAAGTGCACCTAGTGTATCTCACCACAATGTCAATGCCGAGCAAAACCATATTCAGGGGCTCCCTTCTGGTGCATCACATCAAAATACTCAGTGGTCTGATGATCATACTACCAAAATTTCTGAGGTACACCGAGAGCCACAACATCTTTCAACTGATGAGGAATGGCCTCTAATTGAGCCGCCATCAGTTGCTAGTCAGACATCTATCTCAGAGCCTCCTGCTGATTCGGAGCTGCATCCTGATCCAACTAACATGTCATATGACAGAATTAATCATCAAAATGAGATTGATGAAGTTCAGGGGACAGATAACTGCACGATTGAAAATCTTGGTAGTCCTTCAAGCAGAAGGTTGCAGGAGGATAATGCTGGAGGTGCATCTATTTATGAGAATGACCTCTACGGATATCAGAACCAGAATCATACCTTTGACCATCAACAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGGATGTTAACAACTCTGTTTCATCAGTTTCTGCAAACTTGCAACAGTTAAATGTACAAGATGATGGAGGGGTGCCACCTGAGGGAGATGGTCCTTCTGTTGTAATACCAGACCATCTTCAAGTTCAAACTGCAGACTGCTCACACCTGAGCTTTGGTAGCTTTGGCTCTGGTATTGGTGGCTCCTTTTCTGGGCCTTTGGCATCTGCTCCAGTGACTAGTACTTTGGAAGATGCACCTAAGGAAGTGGATGGTTCATCAGTTGGGCACTTGGGATCCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTCAGAATACTATGGTGATGAGTCTCTCAGACATGCATCTGAGAGTAACTTATACCATAGAACTAATGCAAGTTCTGTAAATTACGATTCACCTGCTTCACAACCAGAACCTTTGAAATCAGAAACAAATGAACAAGGAAATCAATATTCGTATCCCTCTTCTGCTGCTGGCTACACATATGAAAGTGCACAACAATTAACTGCAGCATTTAGTCAGCCACAGACAAGTTCCCAGATGCAAAATCTCACTCCTTTCTCTAATGTAATG............................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTCACAAATTCATTGCCTAGCACCTTGTTGGCTGCTATTGCTCATGCTGGTCGTGAAACTGATCTTTCATACTTACCTTTTTCTGCAACACAAGCAATGGCTATGAAATATGGCAGCTCTGTTTCTTCAATTGGTGGTTCAACAATTTCCATGCCTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGAAGGGTGCTGGTTTTCCATCAGCACAGCCTACACAGCAGCCACTTTCTGGAACTAGTGTCACCACTGGACCTACTGTGCCGCAACATCTTGCTGTGCATCCATATAACCAACCACCTCTGGGACCATTTGCTAACATGATAGGTTATCCCTTTTTGCCTCAGAGTTATACATATATGCCATCTGCATTCCAGCAACCATTTGCTGGTAACAGTAATTATCATCAGTCACTGGCGGCGGTGCTTCCTCAATATAAGAACAGTGTGTCAGTCAGCAGCTTACCTCAGCCAGCCAGTGTTGCTTCTGCGTATGGTGGTTTTGGAAATACAGCAAGTATCCCTGGTAACTTCCCAATGAATCCCCCTGCTGCTCCCTCTGGTACTAACTTGAGTTACGATGATGTGTTGAGCTCTCAGTACAAGGATACCAATCATTTAATGTCTCTTCAGCAG...........................................................................................................................................................................................................................................................................AGCGAGAACTCAGCTATGTGGCATGGACCCGGTTCAAGGACAATGTCAGCTGTTCCTGCTAACACATATTATGGTTTTCAAGGTCAAAACCAGCAAAGTAGTGGATTTAGGCAAGCTCAACAGCCGCTGCAAAATCATGGATCCTTGGGGTACCCAAATTTCTACCATTCTCAGGCGGGGATCTCATTAGAACATCAACAACAAAATCCGAGGGATGGGTCATTGGGTGGTGGATCTCAAGGCCAGCCAAAGCAGTTTCAACAGCTATGGCAAAGTGGCGGCTACTAATCTCTTACTGCCTCCTTCTTTTTTGGAGTCTTGTAATGAGTGTGAAAGTGGCTATAGGGTGTTGCTTTGGAAGCAACTAGAATGCACAATCAATTGGATGCTTACCTGTGCCTCAAGGTTGTACTTTACATGTTTGTCATCAGTCAAATGTAACGTAGGATGTGAGCTAACGTCGTGCTAGTGGACTTGTCTTCTGTTTCATCAACTCTTTGTTACACAGTTAACCCCATGGTTTCTTTATTAATAGTGAGAAGTGTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E358836" ref_strand="+" ref_description="SGN-E358836 [cLHT-24-F22]">
      <seq>gaagatgggtaggccacagagcaaagtgccaagtgcacctagtgtatctcaccacaatgtcaatgccaaccaaaaccatattcaggggctcccttctggtgcatcacatcaaaatactcagtggtctgatgatcacactaccaaaatttctgaggtacaccgagagccacaacacctttcaactgatgaggaatggcctctaattgagccgccatcagttgctagtcagacatctatctcagagcctcctgctgattcggagctgcatcctgatccagctaacatgtcatatgacagaattaatcatcaaaatgagattgatgaagttcaggggacagataactgcacgattgaaaatcttggtagtcctccaagcagaaggttgcaggaggataatgctggaggtgcatctatttatgagaatgacctctacggatatcagaaccagaatcatacttttgaccatcaacaagctgaagatgttaacaactccgtttcatcagttgctgcaaacttgcaacatttaaatgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="114260" stop="116457"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114560" g_stop="115032" g_length="473"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="473" r_length="473" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="115033" i_stop="116098" i_length="1066">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="116099" g_stop="116157" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="474" r_stop="532" r_length="59" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E358836" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E358836" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114560" e_stop="115032"/>
          <exon e_start="116099" e_stop="116157"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGATGGGTAGGCCACAGAGCAAAGTGCCAAGTGCACCTAGTGTATCTCACCACAATGTCAATGCCGAGCAAAACCATATTCAGGGGCTCCCTTCTGGTGCATCACATCAAAATACTCAGTGGTCTGATGATCATACTACCAAAATTTCTGAGGTACACCGAGAGCCACAACATCTTTCAACTGATGAGGAATGGCCTCTAATTGAGCCGCCATCAGTTGCTAGTCAGACATCTATCTCAGAGCCTCCTGCTGATTCGGAGCTGCATCCTGATCCAACTAACATGTCATATGACAGAATTAATCATCAAAATGAGATTGATGAAGTTCAGGGGACAGATAACTGCACGATTGAAAATCTTGGTAGTCCTTCAAGCAGAAGGTTGCAGGAGGATAATGCTGGAGGTGCATCTATTTATGAGAATGACCTCTACGGATATCAGAACCAGAATCATACCTTTGACCATCAACAAGGTTAGTATATTACAGTTTTTATTTGGTAATGATATGCATTTCATTGGTGAGAATATGTAGTATTTGTTGTCAAGTAGCTTGTGTAATGTTTTTTTTTGACATGGCACTGTTAATTTTTGTTTTTTTCCACGAGTTCCAGGCATTGGCAAGTCTTTAGTTCCAGTAAACTAAAGATTCTCTCTATCCCCATTCTACAATAAGTAATCATTACATGTTTCATAGAGCAACTATACTGGCACTTAGCTTTTTAGGAATGCAGTTTTAGAACCGAAGGTTTTATATCATACCACCAGTTTAGCTTAAATAAGCTGGACATTTAGTTATGGCTCTTGAATACATGGGTGTTCAATATGCGGAGTGGGACATATAGCAGCAGTGGAGGGCAACAGGGAATATCATCTTAACTGCATCCAAAGCTCTTTCTTACTGTATTTGGAGCTTCAATGTGATTTTACTGCTTTTCATTTTGTTTTATCTTGTCACTTTGATGATAATGTAGCATAGAAAACACTCCTCACAGCTTTTTGTTTGTCTTAGATTTTTTTAATAGGAATTTAAACAATCATTTTTTCTGCAATTTGTTTATTTTGGTATTATCAATGTTTTGTTAACTGTGGCTTAATACATTACTTGGTTGATTTACTGGGGCATCTGATAGATGTATAAAGAGGGAAGCCTTGAGTGCTGACTTTCTGCTCATACTCGTAGGTTGTGTCAACATGAGGTTATTGCAGATTAAGAGGTTCTTCTCATGAATTTTCAAATCTACCATGTGAAGTTGAAGCTTGATGTTCTTGCACATGGCTCCCATATTTGAAAGAGAAGAAAACCCTAACAAATATCAGGCCACGTAGAGACTACTCTGTTTTTGGGGGTGGTGGTGATGTTCATGGGAATTGAGATGTGCTAGTTAGGAGATAAATCAACCTGCTTTTCATGTCATTATTTAGTGGAAAAGCACTGTAGTTTTACTGCATAATCAAATTGTTAACATATGGAGTTCCGTTACTTATAAACTTTTGGAATGTTTATTTTTGTGTAATAATCCTATTTCATTGTCTTGCAGCTGAGGATGTTAACAACTCTGTTTCATCAGTTTCTGCAAACTTGCAACAGTTAAATGTA</genome_strand>
        <mrna_strand>GAAGATGGGTAGGCCACAGAGCAAAGTGCCAAGTGCACCTAGTGTATCTCACCACAATGTCAATGCCAACCAAAACCATATTCAGGGGCTCCCTTCTGGTGCATCACATCAAAATACTCAGTGGTCTGATGATCACACTACCAAAATTTCTGAGGTACACCGAGAGCCACAACACCTTTCAACTGATGAGGAATGGCCTCTAATTGAGCCGCCATCAGTTGCTAGTCAGACATCTATCTCAGAGCCTCCTGCTGATTCGGAGCTGCATCCTGATCCAGCTAACATGTCATATGACAGAATTAATCATCAAAATGAGATTGATGAAGTTCAGGGGACAGATAACTGCACGATTGAAAATCTTGGTAGTCCTCCAAGCAGAAGGTTGCAGGAGGATAATGCTGGAGGTGCATCTATTTATGAGAATGACCTCTACGGATATCAGAACCAGAATCATACTTTTGACCATCAACAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGATGTTAACAACTCCGTTTCATCAGTTGCTGCAAACTTGCAACATTTAAATGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E737473" ref_strand="+" ref_description="SGN-E737473 [LC10AA04]">
      <seq>tgcaggaattcggcacgaggatactaccaaaatttctgaggtacaccgagagccacaacatctttcaactgatgaggaatggcctctaattgagccgccatcagttgctagtcagacatctatctcagagcctcctgctgattcggagctgcatcctgatccaactaacatgtcatatgacagaattaatcatcaaaatgagattgatgaagttcaggggacagataactgcacgattgaaaatcttggtagtccttcaagcagaaggttgcaggaggataatgctggaggtgcatctatttatgagaatgacctctacggatatcagaaccagaatcatacctttgaccatcaacaagctgaggatgttaacaactctgtttcatcagtttctgcaaacttgcaacagttaaatgtacaagatgatggaggggtgccacctgagggagatggtccttctgttgtaataccagaccatcttcaagttcaaactgcagactgctcacacctgagctttggtagctttggctctggtattggtggctccttttctgggcctttggcatctgctccagtgactagtactttggaagatgcacctaaggaagtggatggttcatcagttgggcacttgggatccagagcttcagaatactatggtgatgagtctctcagacatgcatctgagagtaacttataccatagaactaatgcaagttctgtaaattacgattcacctgcttcacaaccagaacctttgaaatcagaaacaaatgaacaaggaaatcaatattcgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="114384" stop="117524"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114694" g_stop="115032" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="359" r_length="339" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="115033" i_stop="116098" i_length="1066">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="116099" g_stop="116381" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="360" r_stop="642" r_length="283" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="116382" i_stop="117068" i_length="687">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="117069" g_stop="117224" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="643" r_stop="798" r_length="156" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E737473" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>778</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E737473" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114694" e_stop="115032"/>
          <exon e_start="116099" e_stop="116381"/>
          <exon e_start="117069" e_stop="117224"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACTACCAAAATTTCTGAGGTACACCGAGAGCCACAACATCTTTCAACTGATGAGGAATGGCCTCTAATTGAGCCGCCATCAGTTGCTAGTCAGACATCTATCTCAGAGCCTCCTGCTGATTCGGAGCTGCATCCTGATCCAACTAACATGTCATATGACAGAATTAATCATCAAAATGAGATTGATGAAGTTCAGGGGACAGATAACTGCACGATTGAAAATCTTGGTAGTCCTTCAAGCAGAAGGTTGCAGGAGGATAATGCTGGAGGTGCATCTATTTATGAGAATGACCTCTACGGATATCAGAACCAGAATCATACCTTTGACCATCAACAAGGTTAGTATATTACAGTTTTTATTTGGTAATGATATGCATTTCATTGGTGAGAATATGTAGTATTTGTTGTCAAGTAGCTTGTGTAATGTTTTTTTTTGACATGGCACTGTTAATTTTTGTTTTTTTCCACGAGTTCCAGGCATTGGCAAGTCTTTAGTTCCAGTAAACTAAAGATTCTCTCTATCCCCATTCTACAATAAGTAATCATTACATGTTTCATAGAGCAACTATACTGGCACTTAGCTTTTTAGGAATGCAGTTTTAGAACCGAAGGTTTTATATCATACCACCAGTTTAGCTTAAATAAGCTGGACATTTAGTTATGGCTCTTGAATACATGGGTGTTCAATATGCGGAGTGGGACATATAGCAGCAGTGGAGGGCAACAGGGAATATCATCTTAACTGCATCCAAAGCTCTTTCTTACTGTATTTGGAGCTTCAATGTGATTTTACTGCTTTTCATTTTGTTTTATCTTGTCACTTTGATGATAATGTAGCATAGAAAACACTCCTCACAGCTTTTTGTTTGTCTTAGATTTTTTTAATAGGAATTTAAACAATCATTTTTTCTGCAATTTGTTTATTTTGGTATTATCAATGTTTTGTTAACTGTGGCTTAATACATTACTTGGTTGATTTACTGGGGCATCTGATAGATGTATAAAGAGGGAAGCCTTGAGTGCTGACTTTCTGCTCATACTCGTAGGTTGTGTCAACATGAGGTTATTGCAGATTAAGAGGTTCTTCTCATGAATTTTCAAATCTACCATGTGAAGTTGAAGCTTGATGTTCTTGCACATGGCTCCCATATTTGAAAGAGAAGAAAACCCTAACAAATATCAGGCCACGTAGAGACTACTCTGTTTTTGGGGGTGGTGGTGATGTTCATGGGAATTGAGATGTGCTAGTTAGGAGATAAATCAACCTGCTTTTCATGTCATTATTTAGTGGAAAAGCACTGTAGTTTTACTGCATAATCAAATTGTTAACATATGGAGTTCCGTTACTTATAAACTTTTGGAATGTTTATTTTTGTGTAATAATCCTATTTCATTGTCTTGCAGCTGAGGATGTTAACAACTCTGTTTCATCAGTTTCTGCAAACTTGCAACAGTTAAATGTACAAGATGATGGAGGGGTGCCACCTGAGGGAGATGGTCCTTCTGTTGTAATACCAGACCATCTTCAAGTTCAAACTGCAGACTGCTCACACCTGAGCTTTGGTAGCTTTGGCTCTGGTATTGGTGGCTCCTTTTCTGGGCCTTTGGCATCTGCTCCAGTGACTAGTACTTTGGAAGATGCACCTAAGGAAGTGGATGGTTCATCAGTTGGGCACTTGGGATCCAGGTAAGGCCTCCTTCTAACCTGTGGATTTTCTTCAACTCATTGATATTTTTTTTATCTAATTATATCAACATATAGTGTAGAAACTATGTTAACATTAACATGCCAAACTCTACTGGCGTTTCCCCTACCCGAGATATGTGGGCAATATAATGCAGAAATTATGTTATGTTAACATGCCAAAACTCTACTGGCATTTTCCCTACCTAGATTTGGGGGTAATTTGTTTTGCCTCTACTTTTTTTACTAAATAACTACAAATATCCTTGCATTTAGTATGTTTGTAGCAGGTTTGTTCTAAATGTTCATCATATTAGTCAATTAAATTAATCTTTACTATTCTAACATCCTAAACAGTTGGTATCTGTATGAATCCTCTGTGCCACCACTGTATTCAGATTCATTTCATTCCAGTCAAATAATTTATCATATAAGACAGGCGTGAAGCTATTCTCTGCCCTTTCCTACCAAAAAGTGATTTAAGACTAAGTTAGGACTTCTCTGAAGCTCACTAAACAGTACATTTTTAAACTTTTATCCTAACATTCCATGTTTTAAGTAAAAAATATCTTACAGGATAACGTTAGTCATCTTATATTCAGTTTCAAAAAAAAAACATTAGTCATCTTATTGAGGGTGTTCAACCTTGCAAGTATTCCTCTTAATTGTTAGTGCATCTTTATATTGCAGAGCTTCAGAATACTATGGTGATGAGTCTCTCAGACATGCATCTGAGAGTAACTTATACCATAGAACTAATGCAAGTTCTGTAAATTACGATTCACCTGCTTCACAACCAGAACCTTTGAAATCAGAAACAAATGAACAAGGAAATCAATATTCGTA</genome_strand>
        <mrna_strand>ATACTACCAAAATTTCTGAGGTACACCGAGAGCCACAACATCTTTCAACTGATGAGGAATGGCCTCTAATTGAGCCGCCATCAGTTGCTAGTCAGACATCTATCTCAGAGCCTCCTGCTGATTCGGAGCTGCATCCTGATCCAACTAACATGTCATATGACAGAATTAATCATCAAAATGAGATTGATGAAGTTCAGGGGACAGATAACTGCACGATTGAAAATCTTGGTAGTCCTTCAAGCAGAAGGTTGCAGGAGGATAATGCTGGAGGTGCATCTATTTATGAGAATGACCTCTACGGATATCAGAACCAGAATCATACCTTTGACCATCAACAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGGATGTTAACAACTCTGTTTCATCAGTTTCTGCAAACTTGCAACAGTTAAATGTACAAGATGATGGAGGGGTGCCACCTGAGGGAGATGGTCCTTCTGTTGTAATACCAGACCATCTTCAAGTTCAAACTGCAGACTGCTCACACCTGAGCTTTGGTAGCTTTGGCTCTGGTATTGGTGGCTCCTTTTCTGGGCCTTTGGCATCTGCTCCAGTGACTAGTACTTTGGAAGATGCACCTAAGGAAGTGGATGGTTCATCAGTTGGGCACTTGGGATCCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTCAGAATACTATGGTGATGAGTCTCTCAGACATGCATCTGAGAGTAACTTATACCATAGAACTAATGCAAGTTCTGTAAATTACGATTCACCTGCTTCACAACCAGAACCTTTGAAATCAGAAACAAATGAACAAGGAAATCAATATTCGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E731908" ref_strand="+" ref_description="SGN-E731908 [LA28CB04]">
      <seq>agatgatggaggggtgccacctgagggagatggtccttctgttgtaataccagaccatcttcaagttcaaactgcagactgctcacacctgagctttggtagctttggctctggtattggtggctccttttctgggcctttggcatctgctccagtgactagtactttggaagatgcacctaaggaagtggatggttcatcagttgggcacttgggatccagagcttcagaatactatggtgatgagtctctcagacatgcatctgagagtaacttataccatagaactaatgcaagttctgtaaattacgattcacctgcttcacaaccagaacctttgaaatcagaaacaaatgaacaaggaaatcaatattcgtatccctcttctgctgctggctacacatatgaaagtgcacaacaattaactgcagcatttagtcagccacagacaagttcccagatgcaaaatctcactcctttctctaatgtaatggctttcacaaattcattgcctagcaccttgttggctgctaatgctcatgctggtcgtgaaactgatctttcatacttacctttttctgcaacacaagcaatggctatgaaatatggcagctctgtttcttcaattggtggttcaacaatttccatgcctgagtctttgaagggtgctggttttccatcagcacagcctacacagcagccactttctggaactagtgtcaccactggacctactgtgccgcaacatcttgctgtgcatccatataaccaaccacctctgggaccatttgctaacatgataggntatccctttttgcctcagagttatacacatatgccatctgcattccagcaaccatttgctggtaacagtaattatcatcagtcactggcggcggtgcttcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="115860" stop="119354"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116160" g_stop="116381" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="222" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116382" i_stop="117068" i_length="687">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="117069" g_stop="117339" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="493" r_length="271" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="117340" i_stop="117751" i_length="412">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="117752" g_stop="117913" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="494" r_stop="655" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="117914" i_stop="118802" i_length="889">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="118803" g_stop="119054" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="656" r_stop="907" r_length="252" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E731908" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>907</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E731908" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116160" e_stop="116381"/>
          <exon e_start="117069" e_stop="117339"/>
          <exon e_start="117752" e_stop="117913"/>
          <exon e_start="118803" e_stop="119054"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATGATGGAGGGGTGCCACCTGAGGGAGATGGTCCTTCTGTTGTAATACCAGACCATCTTCAAGTTCAAACTGCAGACTGCTCACACCTGAGCTTTGGTAGCTTTGGCTCTGGTATTGGTGGCTCCTTTTCTGGGCCTTTGGCATCTGCTCCAGTGACTAGTACTTTGGAAGATGCACCTAAGGAAGTGGATGGTTCATCAGTTGGGCACTTGGGATCCAGGTAAGGCCTCCTTCTAACCTGTGGATTTTCTTCAACTCATTGATATTTTTTTTATCTAATTATATCAACATATAGTGTAGAAACTATGTTAACATTAACATGCCAAACTCTACTGGCGTTTCCCCTACCCGAGATATGTGGGCAATATAATGCAGAAATTATGTTATGTTAACATGCCAAAACTCTACTGGCATTTTCCCTACCTAGATTTGGGGGTAATTTGTTTTGCCTCTACTTTTTTTACTAAATAACTACAAATATCCTTGCATTTAGTATGTTTGTAGCAGGTTTGTTCTAAATGTTCATCATATTAGTCAATTAAATTAATCTTTACTATTCTAACATCCTAAACAGTTGGTATCTGTATGAATCCTCTGTGCCACCACTGTATTCAGATTCATTTCATTCCAGTCAAATAATTTATCATATAAGACAGGCGTGAAGCTATTCTCTGCCCTTTCCTACCAAAAAGTGATTTAAGACTAAGTTAGGACTTCTCTGAAGCTCACTAAACAGTACATTTTTAAACTTTTATCCTAACATTCCATGTTTTAAGTAAAAAATATCTTACAGGATAACGTTAGTCATCTTATATTCAGTTTCAAAAAAAAAACATTAGTCATCTTATTGAGGGTGTTCAACCTTGCAAGTATTCCTCTTAATTGTTAGTGCATCTTTATATTGCAGAGCTTCAGAATACTATGGTGATGAGTCTCTCAGACATGCATCTGAGAGTAACTTATACCATAGAACTAATGCAAGTTCTGTAAATTACGATTCACCTGCTTCACAACCAGAACCTTTGAAATCAGAAACAAATGAACAAGGAAATCAATATTCGTATCCCTCTTCTGCTGCTGGCTACACATATGAAAGTGCACAACAATTAACTGCAGCATTTAGTCAGCCACAGACAAGTTCCCAGATGCAAAATCTCACTCCTTTCTCTAATGTAATGGTAAGTTTCTTTCCTTGTGAAGGATGCAAATAGTTTCCCTGCTCTTCATTGGATGTTTGCGTGTGTGCATTTGCATAGCTCAAGTCTGAAGGTAATTGTACAGAGTATATTGGAGTGAATTCTACTTCTCCAAGGGGTTGTTTGGTAGAGTGCATAAGAATAATGTTAAATCCAGTGCATTAGTGATGCTTGTAAGTTATATCAGCAATGCATGAATTAGTTATGCTTGCATTAATTATACATAGATTATTTTTATGCATTGTTTGGTTTGATGCATTAAAATAGCATGCATTGCATAAAGAAATTTATTTACATAGATAGCCTCATCTAATATAAGTTACCATTCATTTGTTAGAGATCCTAAGACCAGAATTTTCTACATTGAGGTGCTCACTGCTATTGTTTTGAGCAGGCTTTCACAAATTCATTGCCTAGCACCTTGTTGGCTGCTAATGCTCATGCTGGTCGTGAAACTGATCTTTCATACTTACCTTTTTCTGCAACACAAGCAATGGCTATGAAATATGGCAGCTCTGTTTCTTCAATTGGTGGTTCAACAATTTCCATGCCTGAGGTAGTGCTATCCTGATGAAGCTAATTATTTCTTCATTGTGATTGTCAATTTCCTCATGTGCACTTGGTGTATTGCTCATGACCTGCTGGTTGTCAGTATTTTCATGTAATATAATAAGCAAAACATGTTCCTTTTTGTATTCTTTTTGAAGTAATTTTAATGATTCTAGTTGTTTATTTGTGCATGATGAAAAGTTTTACATAATGGATGTAGTTGCATCTTACACGTTTGGTATCTTTCAACATTGGGGAAGAAAGCTTCTGCTATTGAAAACTAAAAATTTGAATATTCTCTCTTGATGTCTATCCAAATGTTTTGAGGGCAGCAACTTTTTTTATTGTGTAAAATCTCTATAGTGGAAAGATGTATACAGAGAGAATAGTTACTCGTCATGGATTTCCACAGTAATTCAAGGCGCACTTGATGTATTTCTGTGTTACATTTTGGAGGCTCTTGCTTGTTAAGAGGAGGAAAGGAAAACCACCCTTTAAATTTAGAAAAAGGAGGCTGAAGTTGTGTGTGTAAATTCCTTATATTATTTTTTGGTTTTCTATGTTAAATAAATGTCAGTACCTTCTGGTTTTTGCATGTAAGATTCCTTTTGGGTTGTTGCAAAAGAAAAGAATGGGCACTCGGTTGTTAATAACCTGAAATTTAAAGATTCACAATAAAAACTGCTAAATTCGGTTGCTATAAGACCTACATAAGATTAATTCCTAAGAGGAGTGTAGGTCGAAAATCAGTTGACGAATGATATAAAAGCTGATGTATAAATCTATTATAGTTTTCCTTTATCATGGAGAAGTGCTGTAAGATGGGACAGATTTTCTATCATCTTCTTTCTTTCTAGAGTTTTTGTGTACATGATTGATTTTTTCTTGACTTGCAGTCTTTGAAGGGTGCTGGTTTTCCATCAGCACAGCCTACACAGCAGCCACTTTCTGGAACTAGTGTCACCACTGGACCTACTGTGCCGCAACATCTTGCTGTGCATCCATATAACCAACCACCTCTGGGACCATTTGCTAACATGATAGGTTATCCCTTTTTGCCTCAGAGTTATACATATATGCCATCTGCATTCCAGCAACCATTTGCTGGTAACAGTAATTATCATCAGTCACTGGCGGCGGTGCTTCCT</genome_strand>
        <mrna_strand>AGATGATGGAGGGGTGCCACCTGAGGGAGATGGTCCTTCTGTTGTAATACCAGACCATCTTCAAGTTCAAACTGCAGACTGCTCACACCTGAGCTTTGGTAGCTTTGGCTCTGGTATTGGTGGCTCCTTTTCTGGGCCTTTGGCATCTGCTCCAGTGACTAGTACTTTGGAAGATGCACCTAAGGAAGTGGATGGTTCATCAGTTGGGCACTTGGGATCCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTCAGAATACTATGGTGATGAGTCTCTCAGACATGCATCTGAGAGTAACTTATACCATAGAACTAATGCAAGTTCTGTAAATTACGATTCACCTGCTTCACAACCAGAACCTTTGAAATCAGAAACAAATGAACAAGGAAATCAATATTCGTATCCCTCTTCTGCTGCTGGCTACACATATGAAAGTGCACAACAATTAACTGCAGCATTTAGTCAGCCACAGACAAGTTCCCAGATGCAAAATCTCACTCCTTTCTCTAATGTAATG............................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTCACAAATTCATTGCCTAGCACCTTGTTGGCTGCTAATGCTCATGCTGGTCGTGAAACTGATCTTTCATACTTACCTTTTTCTGCAACACAAGCAATGGCTATGAAATATGGCAGCTCTGTTTCTTCAATTGGTGGTTCAACAATTTCCATGCCTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGAAGGGTGCTGGTTTTCCATCAGCACAGCCTACACAGCAGCCACTTTCTGGAACTAGTGTCACCACTGGACCTACTGTGCCGCAACATCTTGCTGTGCATCCATATAACCAACCACCTCTGGGACCATTTGCTAACATGATAGGNTATCCCTTTTTGCCTCAGAGTTATACACATATGCCATCTGCATTCCAGCAACCATTTGCTGGTAACAGTAATTATCATCAGTCACTGGCGGCGGTGCTTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E345144" ref_strand="+" ref_description="SGN-E345144 [cTOF-22-F8]">
      <seq>gcttccccaatataagaacagtgtgtcagtcagcagcttacctcagccagccagtgttgcttctgcgtatggtggttttggaaatacagcaagtatccctggtaacttcccaatgaatccccctgctgctccctctggtactaacttgagttacgatgatgtgttgagctctcagtacaaggataccaatcatttaatgtctcttcagcagagcgagaactcagctatgtggcatggacccggttcaaggacaatgtcagctgttcctgctaacacatattatggttttcaaggtcaaaaccagcaaagtagtggatttaggcaagctcaacagccgctgcaaaatcatggatccttggggtacccaaatttctaccattctcaggcggggatctcattagaacatcaacaacaaaatccgagggatgggtcattgggtggtggatctcaaggccagccaaagcagtttcaacagctatggcaaagtggcggctactaatctcttactgcctccttcttttttggagtcttgtaatgagtgtgaaagtggctatagggtgttgctttggaagcaactagaatgcacaatcaattggatgcttacctgtgcctcaaggttgtactttacatgtttgtcatcagtcaaatgtaacgtangatgtgagctaacgtcgtgctagtggacttgtcttctgtttcatcaactctttgttacacagttaaccccatggtttctttattaatagtgaagaagtgtttctgtctccactggaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="118748" stop="120387"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="119048" g_stop="119258" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="119259" i_stop="119525" i_length="267">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.741" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="119526" g_stop="120086" g_length="561"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="774" r_length="563" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="775" polyA_stop="785"/>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E345144" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>772</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E345144" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="119048" e_stop="119258"/>
          <exon e_start="119526" e_stop="120086"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTCCTCAATATAAGAACAGTGTGTCAGTCAGCAGCTTACCTCAGCCAGCCAGTGTTGCTTCTGCGTATGGTGGTTTTGGAAATACAGCAAGTATCCCTGGTAACTTCCCAATGAATCCCCCTGCTGCTCCCTCTGGTACTAACTTGAGTTACGATGATGTGTTGAGCTCTCAGTACAAGGATACCAATCATTTAATGTCTCTTCAGCAGGTACCCATTTCATTTGCTTTAACAGCTGTTCAATTCTTTGAAGTCAATAGTATACTGCAAAATTGCTGTTGATTCTACCTTACTACTCTAATATAATAGGTTGATATATTTCTAAATTGGACAAATAGTTTCTATAGCACTGCTTTTTTCTGGTTAATTTCTTGTGCTAGCTGTATTCTATTGTTTGAGCTTTTGCTCATCAATCCATCCTTCCTTTCCTTGAATTGAAGGCAGCTCATGTATATGCTCATTATTCCTTCCTTTCAGAGCGAGAACTCAGCTATGTGGCATGGACCCGGTTCAAGGACAATGTCAGCTGTTCCTGCTAACACATATTATGGTTTTCAAGGTCAAAACCAGCAAAGTAGTGGATTTAGGCAAGCTCAACAGCCGCTGCAAAATCATGGATCCTTGGGGTACCCAAATTTCTACCATTCTCAGGCGGGGATCTCATTAGAACATCAACAACAAAATCCGAGGGATGGGTCATTGGGTGGTGGATCTCAAGGCCAGCCAAAGCAGTTTCAACAGCTATGGCAAAGTGGCGGCTACTAATCTCTTACTGCCTCCTTCTTTTTTGGAGTCTTGTAATGAGTGTGAAAGTGGCTATAGGGTGTTGCTTTGGAAGCAACTAGAATGCACAATCAATTGGATGCTTACCTGTGCCTCAAGGTTGTACTTTACATGTTTGTCATCAGTCAAATGTAACGTAGGATGTGAGCTAACGTCGTGCTAGTGGACTTGTCTTCTGTTTCATCAACTCTTTGTTACACAGTTAACCCCATGGTTTCTTTATTAATAGTG-AGAAGTG-TTCTGTCTCCACTGGAA</genome_strand>
        <mrna_strand>GCTTCCCCAATATAAGAACAGTGTGTCAGTCAGCAGCTTACCTCAGCCAGCCAGTGTTGCTTCTGCGTATGGTGGTTTTGGAAATACAGCAAGTATCCCTGGTAACTTCCCAATGAATCCCCCTGCTGCTCCCTCTGGTACTAACTTGAGTTACGATGATGTGTTGAGCTCTCAGTACAAGGATACCAATCATTTAATGTCTCTTCAGCAG...........................................................................................................................................................................................................................................................................AGCGAGAACTCAGCTATGTGGCATGGACCCGGTTCAAGGACAATGTCAGCTGTTCCTGCTAACACATATTATGGTTTTCAAGGTCAAAACCAGCAAAGTAGTGGATTTAGGCAAGCTCAACAGCCGCTGCAAAATCATGGATCCTTGGGGTACCCAAATTTCTACCATTCTCAGGCGGGGATCTCATTAGAACATCAACAACAAAATCCGAGGGATGGGTCATTGGGTGGTGGATCTCAAGGCCAGCCAAAGCAGTTTCAACAGCTATGGCAAAGTGGCGGCTACTAATCTCTTACTGCCTCCTTCTTTTTTGGAGTCTTGTAATGAGTGTGAAAGTGGCTATAGGGTGTTGCTTTGGAAGCAACTAGAATGCACAATCAATTGGATGCTTACCTGTGCCTCAAGGTTGTACTTTACATGTTTGTCATCAGTCAAATGTAACGTANGATGTGAGCTAACGTCGTGCTAGTGGACTTGTCTTCTGTTTCATCAACTCTTTGTTACACAGTTAACCCCATGGTTTCTTTATTAATAGTGAAGAAGTGTTTCTGTCTCCACTGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E546401" ref_strand="+" ref_description="SGN-E546401 [TUS-69-L24](-)">
      <seq>aatacagcaagtatccctggtaacttcccaatgaatccccctgctgctccctctagtactaacttgagttacgatgatgtgttgagctctcagtacaaggataccaatcatttaatgtctcttcagcagagcgagaactcagctatgtggcatggacccggttcaaggacaatgtcagctgttcctgctaacacatattatggttttcaaggtcaaaaccagcaaagtagtggatttaggcaagctcaacagccgctgcaaaatcatggatccttggggtacccaaatttctaccattctcaggcggggatctcattagaacatcaacaacaaaatccgagggatgggtcattgggtggtggatctcaaggccagccaaagcagtttcaacagctatggcaaagtggcggctactaatctcttactgcctcctgcttttttggagtcttgtaatgagtgtgaaagtggctataggatgttgctttggaagcaactagaatgcactatcaattggatgcttacctgtgcctcaaggttgtactttacatgtttgtcatcagtcaaatgtaacgtaggatgtgagctaacgtcgtgctagtggacttgtcttctgtttcatcaactctttgttacacagttaaccnccatggtttctttattaatagtgagaagtgttctgtctccaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="118830" stop="120380"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="119130" g_stop="119258" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="119259" i_stop="119525" i_length="267">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.741" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="119526" g_stop="120091" g_length="566"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="696" r_length="567" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E546401" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>695</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E546401" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="119130" e_stop="119258"/>
          <exon e_start="119526" e_stop="120091"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATACAGCAAGTATCCCTGGTAACTTCCCAATGAATCCCCCTGCTGCTCCCTCTGGTACTAACTTGAGTTACGATGATGTGTTGAGCTCTCAGTACAAGGATACCAATCATTTAATGTCTCTTCAGCAGGTACCCATTTCATTTGCTTTAACAGCTGTTCAATTCTTTGAAGTCAATAGTATACTGCAAAATTGCTGTTGATTCTACCTTACTACTCTAATATAATAGGTTGATATATTTCTAAATTGGACAAATAGTTTCTATAGCACTGCTTTTTTCTGGTTAATTTCTTGTGCTAGCTGTATTCTATTGTTTGAGCTTTTGCTCATCAATCCATCCTTCCTTTCCTTGAATTGAAGGCAGCTCATGTATATGCTCATTATTCCTTCCTTTCAGAGCGAGAACTCAGCTATGTGGCATGGACCCGGTTCAAGGACAATGTCAGCTGTTCCTGCTAACACATATTATGGTTTTCAAGGTCAAAACCAGCAAAGTAGTGGATTTAGGCAAGCTCAACAGCCGCTGCAAAATCATGGATCCTTGGGGTACCCAAATTTCTACCATTCTCAGGCGGGGATCTCATTAGAACATCAACAACAAAATCCGAGGGATGGGTCATTGGGTGGTGGATCTCAAGGCCAGCCAAAGCAGTTTCAACAGCTATGGCAAAGTGGCGGCTACTAATCTCTTACTGCCTCCTTCTTTTTTGGAGTCTTGTAATGAGTGTGAAAGTGGCTATAGGGTGTTGCTTTGGAAGCAACTAGAATGCACAATCAATTGGATGCTTACCTGTGCCTCAAGGTTGTACTTTACATGTTTGTCATCAGTCAAATGTAACGTAGGATGTGAGCTAACGTCGTGCTAGTGGACTTGTCTTCTGTTTCATCAACTCTTTGTTACACAGTTAACC-CCATGGTTTCTTTATTAATAGTGAGAAGTGTTCTGTCTCCACTGGAAATGCA</genome_strand>
        <mrna_strand>AATACAGCAAGTATCCCTGGTAACTTCCCAATGAATCCCCCTGCTGCTCCCTCTAGTACTAACTTGAGTTACGATGATGTGTTGAGCTCTCAGTACAAGGATACCAATCATTTAATGTCTCTTCAGCAG...........................................................................................................................................................................................................................................................................AGCGAGAACTCAGCTATGTGGCATGGACCCGGTTCAAGGACAATGTCAGCTGTTCCTGCTAACACATATTATGGTTTTCAAGGTCAAAACCAGCAAAGTAGTGGATTTAGGCAAGCTCAACAGCCGCTGCAAAATCATGGATCCTTGGGGTACCCAAATTTCTACCATTCTCAGGCGGGGATCTCATTAGAACATCAACAACAAAATCCGAGGGATGGGTCATTGGGTGGTGGATCTCAAGGCCAGCCAAAGCAGTTTCAACAGCTATGGCAAAGTGGCGGCTACTAATCTCTTACTGCCTCCTGCTTTTTTGGAGTCTTGTAATGAGTGTGAAAGTGGCTATAGGATGTTGCTTTGGAAGCAACTAGAATGCACTATCAATTGGATGCTTACCTGTGCCTCAAGGTTGTACTTTACATGTTTGTCATCAGTCAAATGTAACGTAGGATGTGAGCTAACGTCGTGCTAGTGGACTTGTCTTCTGTTTCATCAACTCTTTGTTACACAGTTAACCNCCATGGTTTCTTTATTAATAGTGAGAAGTGTTCTGTCTCCAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E716453" ref_strand="+" ref_description="SGN-E716453 [FB17AD06]">
      <seq>ccctgctgctccctctggtactaacttgagttacgatgatgtgttgagctctcagtacaaggataccaatcatttaatgtctcttcagcagagcgagaactcagctatgtggcatggacccggttcaaggacaatgtcagctgttcctgctaacacatattatggttttcaaggtcaaaaccagcaaagtagtggatttaggcaagctcaacagccgctgcaaaatcatggatccttggggtacccaaatttctaccattctcaggcggggatctcattagaacatcaacaacaaaatccgagggatgggtcattgggtggtggatctcaaggccagccaaagcagtttcaacagctatggcaaagtggcggctactaatctcttactgcctccttcttttttggagtcttgtaatgagtgtgaaagtggctatagggtgttgctttggaagcaactagaatgcacaatcaattggatgcttacctgtgcctcaaggttgtactttacatgtttgtcatcagtcaaatgtaacgtaggatgtgagctaacgtcgtgctagtggacttgtcttctgtttcatcaactctttgttacacagttaaccccatggtttctttattaatagtgagaagtgttctgtctccnnnaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="118868" stop="120379"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="119168" g_stop="119258" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="119259" i_stop="119525" i_length="267">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.741" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="119526" g_stop="120086" g_length="561"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="652" r_length="561" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="653" polyA_stop="663"/>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E716453" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>652</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E716453" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="119168" e_stop="119258"/>
          <exon e_start="119526" e_stop="120086"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTGCTGCTCCCTCTGGTACTAACTTGAGTTACGATGATGTGTTGAGCTCTCAGTACAAGGATACCAATCATTTAATGTCTCTTCAGCAGGTACCCATTTCATTTGCTTTAACAGCTGTTCAATTCTTTGAAGTCAATAGTATACTGCAAAATTGCTGTTGATTCTACCTTACTACTCTAATATAATAGGTTGATATATTTCTAAATTGGACAAATAGTTTCTATAGCACTGCTTTTTTCTGGTTAATTTCTTGTGCTAGCTGTATTCTATTGTTTGAGCTTTTGCTCATCAATCCATCCTTCCTTTCCTTGAATTGAAGGCAGCTCATGTATATGCTCATTATTCCTTCCTTTCAGAGCGAGAACTCAGCTATGTGGCATGGACCCGGTTCAAGGACAATGTCAGCTGTTCCTGCTAACACATATTATGGTTTTCAAGGTCAAAACCAGCAAAGTAGTGGATTTAGGCAAGCTCAACAGCCGCTGCAAAATCATGGATCCTTGGGGTACCCAAATTTCTACCATTCTCAGGCGGGGATCTCATTAGAACATCAACAACAAAATCCGAGGGATGGGTCATTGGGTGGTGGATCTCAAGGCCAGCCAAAGCAGTTTCAACAGCTATGGCAAAGTGGCGGCTACTAATCTCTTACTGCCTCCTTCTTTTTTGGAGTCTTGTAATGAGTGTGAAAGTGGCTATAGGGTGTTGCTTTGGAAGCAACTAGAATGCACAATCAATTGGATGCTTACCTGTGCCTCAAGGTTGTACTTTACATGTTTGTCATCAGTCAAATGTAACGTAGGATGTGAGCTAACGTCGTGCTAGTGGACTTGTCTTCTGTTTCATCAACTCTTTGTTACACAGTTAACCCCATGGTTTCTTTATTAATAGTGAGAAGTGTTCTGTCTCCACTGGAA</genome_strand>
        <mrna_strand>CCCTGCTGCTCCCTCTGGTACTAACTTGAGTTACGATGATGTGTTGAGCTCTCAGTACAAGGATACCAATCATTTAATGTCTCTTCAGCAG...........................................................................................................................................................................................................................................................................AGCGAGAACTCAGCTATGTGGCATGGACCCGGTTCAAGGACAATGTCAGCTGTTCCTGCTAACACATATTATGGTTTTCAAGGTCAAAACCAGCAAAGTAGTGGATTTAGGCAAGCTCAACAGCCGCTGCAAAATCATGGATCCTTGGGGTACCCAAATTTCTACCATTCTCAGGCGGGGATCTCATTAGAACATCAACAACAAAATCCGAGGGATGGGTCATTGGGTGGTGGATCTCAAGGCCAGCCAAAGCAGTTTCAACAGCTATGGCAAAGTGGCGGCTACTAATCTCTTACTGCCTCCTTCTTTTTTGGAGTCTTGTAATGAGTGTGAAAGTGGCTATAGGGTGTTGCTTTGGAAGCAACTAGAATGCACAATCAATTGGATGCTTACCTGTGCCTCAAGGTTGTACTTTACATGTTTGTCATCAGTCAAATGTAACGTAGGATGTGAGCTAACGTCGTGCTAGTGGACTTGTCTTCTGTTTCATCAACTCTTTGTTACACAGTTAACCCCATGGTTTCTTTATTAATAGTGAGAAGTGTTCTGTCTCCNNNAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E281083" ref_strand="+" ref_description="SGN-E281083 [cLER-7-K17]">
      <seq>tcaaggacaatgtcagctgttcctgctaacacatattatggttttcaaggtcaaaaccagcaaagtagtggatttaggcaagctcaacagccgctgcaaaatcatggatccttggggtacccaaatttctaccattctcaggcggggatctcattagaacatcaacaacaaaatccgagggatgggtcattgggtggtggatctcaaggccagccaaagcagtttcaacagctatggcaaagtggcggctactaatctcttactgcctccttcttttttggagtcttgtaatgagtgtgaaagtggctatagggtgttgctttggaagcaactagaatgcacaatcaattggatgcttacctgtgcctcaaggttgtactttacatgtttgtcatcagtcaaatgtaacgtangatgtgagctaacgtcgtgctagtggacttgtcttctgtttcatcaactctttgttacacagttaaccccatggtttctttattaatagtgagaagtgttctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="119259" stop="120374"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="119559" g_stop="120074" g_length="516"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="516" r_length="516" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-E281083" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E281083" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="119559" e_stop="120074"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGGACAATGTCAGCTGTTCCTGCTAACACATATTATGGTTTTCAAGGTCAAAACCAGCAAAGTAGTGGATTTAGGCAAGCTCAACAGCCGCTGCAAAATCATGGATCCTTGGGGTACCCAAATTTCTACCATTCTCAGGCGGGGATCTCATTAGAACATCAACAACAAAATCCGAGGGATGGGTCATTGGGTGGTGGATCTCAAGGCCAGCCAAAGCAGTTTCAACAGCTATGGCAAAGTGGCGGCTACTAATCTCTTACTGCCTCCTTCTTTTTTGGAGTCTTGTAATGAGTGTGAAAGTGGCTATAGGGTGTTGCTTTGGAAGCAACTAGAATGCACAATCAATTGGATGCTTACCTGTGCCTCAAGGTTGTACTTTACATGTTTGTCATCAGTCAAATGTAACGTAGGATGTGAGCTAACGTCGTGCTAGTGGACTTGTCTTCTGTTTCATCAACTCTTTGTTACACAGTTAACCCCATGGTTTCTTTATTAATAGTGAGAAGTGTTCTG</genome_strand>
        <mrna_strand>TCAAGGACAATGTCAGCTGTTCCTGCTAACACATATTATGGTTTTCAAGGTCAAAACCAGCAAAGTAGTGGATTTAGGCAAGCTCAACAGCCGCTGCAAAATCATGGATCCTTGGGGTACCCAAATTTCTACCATTCTCAGGCGGGGATCTCATTAGAACATCAACAACAAAATCCGAGGGATGGGTCATTGGGTGGTGGATCTCAAGGCCAGCCAAAGCAGTTTCAACAGCTATGGCAAAGTGGCGGCTACTAATCTCTTACTGCCTCCTTCTTTTTTGGAGTCTTGTAATGAGTGTGAAAGTGGCTATAGGGTGTTGCTTTGGAAGCAACTAGAATGCACAATCAATTGGATGCTTACCTGTGCCTCAAGGTTGTACTTTACATGTTTGTCATCAGTCAAATGTAACGTANGATGTGAGCTAACGTCGTGCTAGTGGACTTGTCTTCTGTTTCATCAACTCTTTGTTACACAGTTAACCCCATGGTTTCTTTATTAATAGTGAGAAGTGTTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E215828" ref_strand="+" ref_description="SGN-E215828 [cLEL-15-J4](-)">
      <seq>agtgttctccaaggattctttgatgctgttggtattcttcttaggggcaatgtagaaaagaaggaggcacttgaaaatttggaccttattcttttgtgtctggatgaaattgttgatggcggaatcgttcttgaaacggatgctaatgttattgctgggaaagtggcaagcaacagcgttgattctggggcacctttgtcggagcagactataagtcaagcattggcaactgcacgagaacacttggcaagatctcttctcaaatgatttgttgggtctacaaaagaaagggaaaacaggtcttgcaagtactgattttctttccttctgaatgaactaattgatgagcatcagtttacatgtgttttggcaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="123401" stop="120528"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="123101" g_stop="123058" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="44" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="123057" i_stop="122963" i_length="95">
            <donor d_prob="0.872" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="122962" g_stop="122885" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="122" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="122884" i_stop="121226" i_length="1659">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121225" g_stop="121141" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="207" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="121140" i_stop="121009" i_length="132">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="121008" g_stop="120827" g_length="182"/>
          <reference_exon_boundary r_type="cDNA" r_start="208" r_stop="389" r_length="182" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-E215828" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>389</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E215828" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="123101" e_stop="123058"/>
          <exon e_start="122962" e_stop="122885"/>
          <exon e_start="121225" e_stop="121141"/>
          <exon e_start="121008" e_stop="120827"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTGTTCTCCAAGGATTCTTTGATGCTGTTGGTATTCTTCTTAGGTTGTTTACAAAAGCAGTCTTTTCCTTTTCAATATGCATCCGTTGATATTTTCGTCTTCATGCACTCATCTTGCTGCAAATGCCTTTTGTTTTAGGGGCAATGTAGAAAAGAAGGAGGCACTTGAAAATTTGGACCTTATTCTTTTGTGTCTGGATGAAATTGTTGATGGCGGGTAAGAGAATTGTACCATGATCATTTTATTTGTTTCAAATTCTGAACTATAAAATCTTCGTTTAATGTTGCTTATCTTACTGTTTTGCTGCAACTTTTACTCGATCTTTGTACAAATATAGCATGTCAGGAACCTTTATTCTTTTCTTTTATAGTTATAGAGAATTAGAGCTTCAAAAGCTTATCTAACTTTCTGAACCATAGTAAAATTAATATTTGGATTTAATATGCCACAAATAGGGGGAAAATAAAAGGCAATTGTGTAGTTAATAAGACATTTTGTCTTTGCTGGAGACTTATTAAGACAAGACTTCTGATTAACAGAATCATAGGATACTTCTTACACAAAATTCCCCCCCACCTACCACCACCCCAAAAAAGAACAAATAGAGGAAAAACGAGAACATCAATTATCAAGCCTATAGCAGTGACCTCTTCCCTATGGACATTTTTCTTTCACAAGCTATAAAGCTCTCCTCAGCTTAGCTATTAATCTTATGAGTAATATATAGTGATAGTACATCACACTCCTTATTTTGGACAGTCACTGTATTAGCTATCCTTTTTCTATGTTAGTGACTTCATTCTTATGAAAAGTTGCCTCGTGGGATTGGGTTGAGTGACTTTTTCCTTTGACGGTATATGTTCATTCATCTTAGTCAAGTAGTTTTGCTCTCCTGTTACTTTAGACTCTGGGTGTATTTGATATGCCGAACAATGTTTTACATAGAAAATATTTTTTATCGAAAAATAAGCCTTTTACTTAATTACTTTGGTGTTTGGTAAGTAAACAAAATATTTTTTTTGTCTCGAGAGCATTTACATGCAGTTTTGGAAAATACTATGAATATGCAGCATAGGAAAACACTATGGGGTGTAGAAGGATAGTAGGTAGCCGTTTGTTGTAGTACATTCATGAGGGAGAAGCATGGAGCTAATCTCCTCTTCTCGTCTTCTCTTTATTTAGTAGTGTTACCTTGTATTCGTGTAGTTTCTTATTCTTCATCTTTGTTTATCTTGTTATTTTCCTTTCTATCCTTCTTTGATTGCACTTTTTTGAGCAGAGGGCCTTAGAAACTACTCTTTCCCACTAAAGTAGGGGTAAGCTCTAGGTACATCCTACCTCCCCTCCACCCCCCCAAACCCCACTTGTGGAATTACACTGGTCTCTGCTGTTGTATTATGTGGTGTTGTATTATGTGGTGGACTGCTAAGGGAGTGGGTGGGGGTGGAAACCATGGCTTCGGGAGGAGACAATGAGCTTGGAATGTCAAGTATGACACTTGTTCTCTTCTTCCACTAGGGAAGTCATTTTACTGATTTTGAAGGAACTTGTGTTCTTAGAGAAAATGTTCTCCAAAATCATTTTGACCAACCAAACATGGGAAAATTGGAAAACATTCTCTGTACTAAACACACCCTCAATGTCCACTTCTTCGTCCATCCTAATTCCCCACTTCCACTGTAGAGTTCATACGTTTTTTGACATGCCGTGTTTAGTAATTAGTACATATTAGAGTGTTTGACCTTGAGAATTGATGTGGAAAAAAGAGAATGGAAAAGAAAGCGGACTTCCAATCTTGCTCTCAATTTCAGTTATGGGGAACTAAGTGTTTACAATCTTTTGAATATCCTCCATGTCACTTTCTTGGCTCTGTAGAATCGTTCTTGAAACGGATGCTAATGTTATTGCTGGGAAAGTGGCAAGCAACAGCGTTGATTCTGGGGCACCTTTGTCGGAGCAGGTAAATATTGCTCTCTTTCTCAGTTTCTTGATGCTTTGGTCCTTCAAACGGATGGAATAGTTGCTTCATTAATTACCATCCCCGTCCACTTAACTCATTTTTTCACTACACATCCTTTGTGGTTTTCTACAGACTATAAGTCAAGCATTGGCAACTGCACGAGAACACTTGGCAAGATCTCTTCTCAAATGATTTGTTGGGTCTACAAAAGAAAGGGAAAACAGGTCTTGCAAGTACTGATTTTCTTTCCTTCTGAATGAACTAATTGATGAGCATCAGTTTACATGTGTTTTGGCAAAAAACAAAAAAAAAAT</genome_strand>
        <mrna_strand>AGTGTTCTCCAAGGATTCTTTGATGCTGTTGGTATTCTTCTTAG...............................................................................................GGGCAATGTAGAAAAGAAGGAGGCACTTGAAAATTTGGACCTTATTCTTTTGTGTCTGGATGAAATTGTTGATGGCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGTTCTTGAAACGGATGCTAATGTTATTGCTGGGAAAGTGGCAAGCAACAGCGTTGATTCTGGGGCACCTTTGTCGGAGCAG....................................................................................................................................ACTATAAGTCAAGCATTGGCAACTGCACGAGAACACTTGGCAAGATCTCTTCTCAAATGATTTGTTGGGTCTACAAAAGAAAGGGAAAACAGGTCTTGCAAGTACTGATTTTCTTTCCTTCTGAATGAACTAATTGATGAGCATCAGTTTACATGTGTTTTGGCAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E215712" ref_strand="+" ref_description="SGN-E215712 [cLEL-15-J4](-)">
      <seq>aaggattctttgatgctgttggtattcttcttaggggcaatgtagaaaagaaggaggcacttgaaaatttggaccttattcttttgtgtctggatgaaattgttgatggcggaatcgttcttgaaacggatgctaatgttattgctgggaaagtggcaagcaacagcgttgattctggggcacctttgtcggagcagactataagtcaagcattggcaactgcacgagaacacttggcaagatctcttctcaaatgatttgttgggtctacaaaagaaagggaaaacaggtcttgcaagtactgattttctttccttctgaatgaactaattgatgagcatcagtttacatgtgttttggcaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="123391" stop="120528"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="123091" g_stop="123058" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="34" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="123057" i_stop="122963" i_length="95">
            <donor d_prob="0.872" d_score="0.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="122962" g_stop="122885" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="112" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="122884" i_stop="121226" i_length="1659">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121225" g_stop="121141" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="197" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="121140" i_stop="121009" i_length="132">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="121008" g_stop="120827" g_length="182"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="379" r_length="182" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-E215712" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>379</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E215712" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="123091" e_stop="123058"/>
          <exon e_start="122962" e_stop="122885"/>
          <exon e_start="121225" e_stop="121141"/>
          <exon e_start="121008" e_stop="120827"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGATTCTTTGATGCTGTTGGTATTCTTCTTAGGTTGTTTACAAAAGCAGTCTTTTCCTTTTCAATATGCATCCGTTGATATTTTCGTCTTCATGCACTCATCTTGCTGCAAATGCCTTTTGTTTTAGGGGCAATGTAGAAAAGAAGGAGGCACTTGAAAATTTGGACCTTATTCTTTTGTGTCTGGATGAAATTGTTGATGGCGGGTAAGAGAATTGTACCATGATCATTTTATTTGTTTCAAATTCTGAACTATAAAATCTTCGTTTAATGTTGCTTATCTTACTGTTTTGCTGCAACTTTTACTCGATCTTTGTACAAATATAGCATGTCAGGAACCTTTATTCTTTTCTTTTATAGTTATAGAGAATTAGAGCTTCAAAAGCTTATCTAACTTTCTGAACCATAGTAAAATTAATATTTGGATTTAATATGCCACAAATAGGGGGAAAATAAAAGGCAATTGTGTAGTTAATAAGACATTTTGTCTTTGCTGGAGACTTATTAAGACAAGACTTCTGATTAACAGAATCATAGGATACTTCTTACACAAAATTCCCCCCCACCTACCACCACCCCAAAAAAGAACAAATAGAGGAAAAACGAGAACATCAATTATCAAGCCTATAGCAGTGACCTCTTCCCTATGGACATTTTTCTTTCACAAGCTATAAAGCTCTCCTCAGCTTAGCTATTAATCTTATGAGTAATATATAGTGATAGTACATCACACTCCTTATTTTGGACAGTCACTGTATTAGCTATCCTTTTTCTATGTTAGTGACTTCATTCTTATGAAAAGTTGCCTCGTGGGATTGGGTTGAGTGACTTTTTCCTTTGACGGTATATGTTCATTCATCTTAGTCAAGTAGTTTTGCTCTCCTGTTACTTTAGACTCTGGGTGTATTTGATATGCCGAACAATGTTTTACATAGAAAATATTTTTTATCGAAAAATAAGCCTTTTACTTAATTACTTTGGTGTTTGGTAAGTAAACAAAATATTTTTTTTGTCTCGAGAGCATTTACATGCAGTTTTGGAAAATACTATGAATATGCAGCATAGGAAAACACTATGGGGTGTAGAAGGATAGTAGGTAGCCGTTTGTTGTAGTACATTCATGAGGGAGAAGCATGGAGCTAATCTCCTCTTCTCGTCTTCTCTTTATTTAGTAGTGTTACCTTGTATTCGTGTAGTTTCTTATTCTTCATCTTTGTTTATCTTGTTATTTTCCTTTCTATCCTTCTTTGATTGCACTTTTTTGAGCAGAGGGCCTTAGAAACTACTCTTTCCCACTAAAGTAGGGGTAAGCTCTAGGTACATCCTACCTCCCCTCCACCCCCCCAAACCCCACTTGTGGAATTACACTGGTCTCTGCTGTTGTATTATGTGGTGTTGTATTATGTGGTGGACTGCTAAGGGAGTGGGTGGGGGTGGAAACCATGGCTTCGGGAGGAGACAATGAGCTTGGAATGTCAAGTATGACACTTGTTCTCTTCTTCCACTAGGGAAGTCATTTTACTGATTTTGAAGGAACTTGTGTTCTTAGAGAAAATGTTCTCCAAAATCATTTTGACCAACCAAACATGGGAAAATTGGAAAACATTCTCTGTACTAAACACACCCTCAATGTCCACTTCTTCGTCCATCCTAATTCCCCACTTCCACTGTAGAGTTCATACGTTTTTTGACATGCCGTGTTTAGTAATTAGTACATATTAGAGTGTTTGACCTTGAGAATTGATGTGGAAAAAAGAGAATGGAAAAGAAAGCGGACTTCCAATCTTGCTCTCAATTTCAGTTATGGGGAACTAAGTGTTTACAATCTTTTGAATATCCTCCATGTCACTTTCTTGGCTCTGTAGAATCGTTCTTGAAACGGATGCTAATGTTATTGCTGGGAAAGTGGCAAGCAACAGCGTTGATTCTGGGGCACCTTTGTCGGAGCAGGTAAATATTGCTCTCTTTCTCAGTTTCTTGATGCTTTGGTCCTTCAAACGGATGGAATAGTTGCTTCATTAATTACCATCCCCGTCCACTTAACTCATTTTTTCACTACACATCCTTTGTGGTTTTCTACAGACTATAAGTCAAGCATTGGCAACTGCACGAGAACACTTGGCAAGATCTCTTCTCAAATGATTTGTTGGGTCTACAAAAGAAAGGGAAAACAGGTCTTGCAAGTACTGATTTTCTTTCCTTCTGAATGAACTAATTGATGAGCATCAGTTTACATGTGTTTTGGCAAAAAACAAAAAAAAAAT</genome_strand>
        <mrna_strand>AAGGATTCTTTGATGCTGTTGGTATTCTTCTTAG...............................................................................................GGGCAATGTAGAAAAGAAGGAGGCACTTGAAAATTTGGACCTTATTCTTTTGTGTCTGGATGAAATTGTTGATGGCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGTTCTTGAAACGGATGCTAATGTTATTGCTGGGAAAGTGGCAAGCAACAGCGTTGATTCTGGGGCACCTTTGTCGGAGCAG....................................................................................................................................ACTATAAGTCAAGCATTGGCAACTGCACGAGAACACTTGGCAAGATCTCTTCTCAAATGATTTGTTGGGTCTACAAAAGAAAGGGAAAACAGGTCTTGCAAGTACTGATTTTCTTTCCTTCTGAATGAACTAATTGATGAGCATCAGTTTACATGTGTTTTGGCAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E745116" ref_strand="+" ref_description="SGN-E745116 [GI|47106012]">
      <seq>gacggacccagcaaataggctcttctcctcccttctctacggcgtgcaattctggtgtgtccgtaggtcgtgcgatccgccattttcaacctcaattcaccaacaatggagatctgcccttcaattaagaacattctgcttctagattccgaaggaaagcgtgttgctgtaaactactactcagatgattggccaacaaatgctgcaaaggaagcttttgagaaggccgtgtttgccaagactcaaaagacaaatgctagggcagaagcggagattacaatgtttgataattatattgttgtctacaagtttgctcaagatcttcatttctttgttactgggagtgacaatgaaaatgaaataatccttgccagtgttctccaaggattctttgacgctgttggtattcttcttaggggcaatgtggaaaagaaggaggcacttgaaaatttggaccttattcttttgtgtctggatgaaattgttgatggcggaatcgttcttgaaacggatgctaatgttattgctgggaaagtggcaagcaacagcgttgattctggggcacctttgtcggagcagactataagtcaagcattggcaactgcacgagaacacttggcaagatctcttctcaaatgatttgttgggtctacaaaagaaagggaaaacaggtcttgcaagtactgattttctttccttctgaatgaactaattgatgagcatcagtttacatgtgttttggcgaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="125313" stop="120528"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125014" g_stop="124907" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="108" r_length="108" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="124906" i_stop="123876" i_length="1031">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="123875" g_stop="123716" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="268" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="123715" i_stop="123206" i_length="510">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.777" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="123205" g_stop="123058" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="416" r_length="148" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="123057" i_stop="122963" i_length="95">
            <donor d_prob="0.872" d_score="0.98"/>
            <acceptor a_prob="0.968" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="122962" g_stop="122885" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="494" r_length="78" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="122884" i_stop="121226" i_length="1659">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="121225" g_stop="121141" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="495" r_stop="579" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="121140" i_stop="121009" i_length="132">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="121008" g_stop="120829" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="580" r_stop="759" r_length="180" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-E745116" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>759</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E745116" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125014" e_stop="124907"/>
          <exon e_start="123875" e_stop="123716"/>
          <exon e_start="123205" e_stop="123058"/>
          <exon e_start="122962" e_stop="122885"/>
          <exon e_start="121225" e_stop="121141"/>
          <exon e_start="121008" e_stop="120829"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACGGACCCAGCAAATAGGCTCTTCTCCTCCCTTCTCTACGGCGTGCAATTCTGGTGTGTCCGTAGGTCGTGCGATCCGCCATTTTCAACCTCAATTCACCAACAATGGTTAGCTCTCACTCTTTCTCTTTACACTTTTGAGTAATTCTCTTCTTTTTTTTTCAACTAAACTTTTTTGCCCAAAACAAGCTCTTTGTTTTTTTATCACTGATCTTGTGTTGTATGGTTGAATTTATCACTGGTAGAAAAAATTATGCATTTTTGGGGTTTTAGTTTTAGTCGAATTGGAATAGTTGGACTAGTGTTTTTTCGTGATCTCTTTGATTGTCGACGTTTTTCTAGAGTTTTGTTTACTTGGAGGTATAATTGGAAGGGTATATGAATCAGATCTAGCATCTGTAAGTATTCAACAATGGGAAGAAAAAAACTTAAGAATTAAACAAAAGGAAGAGGAAACTTTTTTATGTGGGCAAGTAAGATTATTTGCAGTATATACAGCACCAGTTAGTTTTTTTTTTCCTTTAGGAACGCCCTAATTGGGAGAATACCAATGTTTAAGTTGGCCAGCAACCCACACATTTAAGGCTAATTTGGGTTTATTCTTGGTTTCATGTTTTGAAATGAGATGTTGTATTTACCTTGTTAGAATCGGAATTTTTGCTCAAGAATAAGGAAATGTGGTACTTTATAACTAGGGCGGAGATATTTTATAAAATAGTGAGGATTTTCTATCGAGAGAATAAAGGGAAAGGGTAGCTGAGCGAACTTCTGGTTTAAGGTTTAGTTGCTGGTGACATCTATAGCTGTGTGGGCCATTGAAAGGGAAGGCAATATCTTTTGTGTTGTCGCTGTGCTTGATTTGGAGTATGATTTATGTTGCACGTGTGCTTTAACAGAAAACTAAAAGGAGAATATGTAATGGTGGCTGTATCTTGGAATGTTGAGACTATGGATGAACTTGAACTATTGATAGATAGAACCATAAGCAATTCATGGATGACTGTCTCAAATGTGTCAATATATGCTTTTAACCCATTTCTCTGTAAAACGGGAAAAGAAATTTATCCCTTTTTAAAAATCATATATGGATGGATGTGTAGACATATCCTGCTATAATATCTTTCAAATCCTTTTCGCAGGAGATCTGCCCTTCAATTAAGAACATTCTGCTTCTAGATTCCGAAGGAAAGCGTGTTGCTGTAAACTACTACTCAGATGATTGGCCAACAAATGCTGCAAAGGAAGCTTTTGAGAAGGCCGTGTTTGCCAAGACTCAAAAGACAAATGCTAGGGCAGAAGGTATGATATCTCTTTTACTGTTGATTTATTTATTTATATTTAGTCATGCTCTTTCCCAATATCTCCCTCTCAACATGCAAAGGAAGCAAAGCTCATTCGGATAGTTAGTGATGTTCCATTCTGCACTAGAGTTGTTTGTGATGCCATCTTATGTAGTATACCTTGCCAGTCTCTGCAAACATTGAGTTCTATTAAACTCTGGTGGTATGTATTAAATCAAGAGCCAAAAACAAAGTTTTGCTAATTTACCAAATAGATCAGTGATGAGTAGGCTGATAATAATAATCTTAGAAGACTTGGCTTTGTGTTGTTTGCTTGCATATCCTCTTCTTGAAGTTGGTTGTTGGTGTGAGATCACTTGTTACATCAGAGTTGTCTTTATGCCAGTGACTAAATTGGACCGTTGTGCTACTACCCCCCTCCCCACCCCCTCTTGGCTGATGAAACTAAATTTTGTGATTGGAAAGGCAACCTTCATCTGTCTGAACTCTCTTCTCACTTCTTCTGCAGCGGAGATTACAATGTTTGATAATTATATTGTTGTCTACAAGTTTGCTCAAGATCTTCATTTCTTTGTTACTGGGAGTGACAATGAAAATGAAATAATCCTTGCCAGTGTTCTCCAAGGATTCTTTGATGCTGTTGGTATTCTTCTTAGGTTGTTTACAAAAGCAGTCTTTTCCTTTTCAATATGCATCCGTTGATATTTTCGTCTTCATGCACTCATCTTGCTGCAAATGCCTTTTGTTTTAGGGGCAATGTAGAAAAGAAGGAGGCACTTGAAAATTTGGACCTTATTCTTTTGTGTCTGGATGAAATTGTTGATGGCGGGTAAGAGAATTGTACCATGATCATTTTATTTGTTTCAAATTCTGAACTATAAAATCTTCGTTTAATGTTGCTTATCTTACTGTTTTGCTGCAACTTTTACTCGATCTTTGTACAAATATAGCATGTCAGGAACCTTTATTCTTTTCTTTTATAGTTATAGAGAATTAGAGCTTCAAAAGCTTATCTAACTTTCTGAACCATAGTAAAATTAATATTTGGATTTAATATGCCACAAATAGGGGGAAAATAAAAGGCAATTGTGTAGTTAATAAGACATTTTGTCTTTGCTGGAGACTTATTAAGACAAGACTTCTGATTAACAGAATCATAGGATACTTCTTACACAAAATTCCCCCCCACCTACCACCACCCCAAAAAAGAACAAATAGAGGAAAAACGAGAACATCAATTATCAAGCCTATAGCAGTGACCTCTTCCCTATGGACATTTTTCTTTCACAAGCTATAAAGCTCTCCTCAGCTTAGCTATTAATCTTATGAGTAATATATAGTGATAGTACATCACACTCCTTATTTTGGACAGTCACTGTATTAGCTATCCTTTTTCTATGTTAGTGACTTCATTCTTATGAAAAGTTGCCTCGTGGGATTGGGTTGAGTGACTTTTTCCTTTGACGGTATATGTTCATTCATCTTAGTCAAGTAGTTTTGCTCTCCTGTTACTTTAGACTCTGGGTGTATTTGATATGCCGAACAATGTTTTACATAGAAAATATTTTTTATCGAAAAATAAGCCTTTTACTTAATTACTTTGGTGTTTGGTAAGTAAACAAAATATTTTTTTTGTCTCGAGAGCATTTACATGCAGTTTTGGAAAATACTATGAATATGCAGCATAGGAAAACACTATGGGGTGTAGAAGGATAGTAGGTAGCCGTTTGTTGTAGTACATTCATGAGGGAGAAGCATGGAGCTAATCTCCTCTTCTCGTCTTCTCTTTATTTAGTAGTGTTACCTTGTATTCGTGTAGTTTCTTATTCTTCATCTTTGTTTATCTTGTTATTTTCCTTTCTATCCTTCTTTGATTGCACTTTTTTGAGCAGAGGGCCTTAGAAACTACTCTTTCCCACTAAAGTAGGGGTAAGCTCTAGGTACATCCTACCTCCCCTCCACCCCCCCAAACCCCACTTGTGGAATTACACTGGTCTCTGCTGTTGTATTATGTGGTGTTGTATTATGTGGTGGACTGCTAAGGGAGTGGGTGGGGGTGGAAACCATGGCTTCGGGAGGAGACAATGAGCTTGGAATGTCAAGTATGACACTTGTTCTCTTCTTCCACTAGGGAAGTCATTTTACTGATTTTGAAGGAACTTGTGTTCTTAGAGAAAATGTTCTCCAAAATCATTTTGACCAACCAAACATGGGAAAATTGGAAAACATTCTCTGTACTAAACACACCCTCAATGTCCACTTCTTCGTCCATCCTAATTCCCCACTTCCACTGTAGAGTTCATACGTTTTTTGACATGCCGTGTTTAGTAATTAGTACATATTAGAGTGTTTGACCTTGAGAATTGATGTGGAAAAAAGAGAATGGAAAAGAAAGCGGACTTCCAATCTTGCTCTCAATTTCAGTTATGGGGAACTAAGTGTTTACAATCTTTTGAATATCCTCCATGTCACTTTCTTGGCTCTGTAGAATCGTTCTTGAAACGGATGCTAATGTTATTGCTGGGAAAGTGGCAAGCAACAGCGTTGATTCTGGGGCACCTTTGTCGGAGCAGGTAAATATTGCTCTCTTTCTCAGTTTCTTGATGCTTTGGTCCTTCAAACGGATGGAATAGTTGCTTCATTAATTACCATCCCCGTCCACTTAACTCATTTTTTCACTACACATCCTTTGTGGTTTTCTACAGACTATAAGTCAAGCATTGGCAACTGCACGAGAACACTTGGCAAGATCTCTTCTCAAATGATTTGTTGGGTCTACAAAAGAAAGGGAAAACAGGTCTTGCAAGTACTGATTTTCTTTCCTTCTGAATGAACTAATTGATGAGCATCAGTTTACATGTGTTTTGGCAAAAAACAAAAAAAAA</genome_strand>
        <mrna_strand>GACGGACCCAGCAAATAGGCTCTTCTCCTCCCTTCTCTACGGCGTGCAATTCTGGTGTGTCCGTAGGTCGTGCGATCCGCCATTTTCAACCTCAATTCACCAACAATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATCTGCCCTTCAATTAAGAACATTCTGCTTCTAGATTCCGAAGGAAAGCGTGTTGCTGTAAACTACTACTCAGATGATTGGCCAACAAATGCTGCAAAGGAAGCTTTTGAGAAGGCCGTGTTTGCCAAGACTCAAAAGACAAATGCTAGGGCAGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGATTACAATGTTTGATAATTATATTGTTGTCTACAAGTTTGCTCAAGATCTTCATTTCTTTGTTACTGGGAGTGACAATGAAAATGAAATAATCCTTGCCAGTGTTCTCCAAGGATTCTTTGACGCTGTTGGTATTCTTCTTAG...............................................................................................GGGCAATGTGGAAAAGAAGGAGGCACTTGAAAATTTGGACCTTATTCTTTTGTGTCTGGATGAAATTGTTGATGGCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGTTCTTGAAACGGATGCTAATGTTATTGCTGGGAAAGTGGCAAGCAACAGCGTTGATTCTGGGGCACCTTTGTCGGAGCAG....................................................................................................................................ACTATAAGTCAAGCATTGGCAACTGCACGAGAACACTTGGCAAGATCTCTTCTCAAATGATTTGTTGGGTCTACAAAAGAAAGGGAAAACAGGTCTTGCAAGTACTGATTTTCTTTCCTTCTGAATGAACTAATTGATGAGCATCAGTTTACATGTGTTTTGGCGAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E290057" ref_strand="+" ref_description="SGN-E290057 [cLET-5-E16]">
      <seq>caaataggctcttctcctcccttctctacggcgtgcaattctggtgtgtccgtacgtcgtgcgatccgccattttcaacctcaattcaccaacaatggagatctgcccttcaattacgaacattctgcttctagattccgaaggaaagcgtgtggttgtgaactactactcagatgattggccaacaaatgctgcagaggaagcttttgagaaggccgtgtttgccaagactcaaaagacaaatgctagggcagaagcggcgattacaatgtttgataattatattggtgactacaagtttgctcaagatcttcatttctttgttactgggagtgacagtgaaaaggaaataatccttgccagagatctccaaggattcttggatgctgacggtattcttcttaggggcaatgtagaaaagaaggaggcacttgaaaattgggaccttattctttagtgtctggatgaaatagttgatggcggaatcgatcttgaaacggatgctaatgttattgctgggaaagtggcaagcaacagcgttgattctggggcacctttgtcggagcagactataagtcaagcattggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="125303" stop="120689"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125003" g_stop="124907" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="97" r_length="97" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="124906" i_stop="123876" i_length="1031">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.912" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="123875" g_stop="123716" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="257" r_length="160" r_score="0.969"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="123715" i_stop="123206" i_length="510">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.777" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="123205" g_stop="123058" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="405" r_length="148" r_score="0.932"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="123057" i_stop="122963" i_length="95">
            <donor d_prob="0.872" d_score="0.90"/>
            <acceptor a_prob="0.968" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="122962" g_stop="122885" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="483" r_length="78" r_score="0.962"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="122884" i_stop="121226" i_length="1659">
            <donor d_prob="0.995" d_score="0.94"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="121225" g_stop="121141" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="568" r_length="85" r_score="0.988"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="121140" i_stop="121009" i_length="132">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="121008" g_stop="120989" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="569" r_stop="588" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-E290057" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>588</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E290057" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125003" e_stop="124907"/>
          <exon e_start="123875" e_stop="123716"/>
          <exon e_start="123205" e_stop="123058"/>
          <exon e_start="122962" e_stop="122885"/>
          <exon e_start="121225" e_stop="121141"/>
          <exon e_start="121008" e_stop="120989"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAATAGGCTCTTCTCCTCCCTTCTCTACGGCGTGCAATTCTGGTGTGTCCGTAGGTCGTGCGATCCGCCATTTTCAACCTCAATTCACCAACAATGGTTAGCTCTCACTCTTTCTCTTTACACTTTTGAGTAATTCTCTTCTTTTTTTTTCAACTAAACTTTTTTGCCCAAAACAAGCTCTTTGTTTTTTTATCACTGATCTTGTGTTGTATGGTTGAATTTATCACTGGTAGAAAAAATTATGCATTTTTGGGGTTTTAGTTTTAGTCGAATTGGAATAGTTGGACTAGTGTTTTTTCGTGATCTCTTTGATTGTCGACGTTTTTCTAGAGTTTTGTTTACTTGGAGGTATAATTGGAAGGGTATATGAATCAGATCTAGCATCTGTAAGTATTCAACAATGGGAAGAAAAAAACTTAAGAATTAAACAAAAGGAAGAGGAAACTTTTTTATGTGGGCAAGTAAGATTATTTGCAGTATATACAGCACCAGTTAGTTTTTTTTTTCCTTTAGGAACGCCCTAATTGGGAGAATACCAATGTTTAAGTTGGCCAGCAACCCACACATTTAAGGCTAATTTGGGTTTATTCTTGGTTTCATGTTTTGAAATGAGATGTTGTATTTACCTTGTTAGAATCGGAATTTTTGCTCAAGAATAAGGAAATGTGGTACTTTATAACTAGGGCGGAGATATTTTATAAAATAGTGAGGATTTTCTATCGAGAGAATAAAGGGAAAGGGTAGCTGAGCGAACTTCTGGTTTAAGGTTTAGTTGCTGGTGACATCTATAGCTGTGTGGGCCATTGAAAGGGAAGGCAATATCTTTTGTGTTGTCGCTGTGCTTGATTTGGAGTATGATTTATGTTGCACGTGTGCTTTAACAGAAAACTAAAAGGAGAATATGTAATGGTGGCTGTATCTTGGAATGTTGAGACTATGGATGAACTTGAACTATTGATAGATAGAACCATAAGCAATTCATGGATGACTGTCTCAAATGTGTCAATATATGCTTTTAACCCATTTCTCTGTAAAACGGGAAAAGAAATTTATCCCTTTTTAAAAATCATATATGGATGGATGTGTAGACATATCCTGCTATAATATCTTTCAAATCCTTTTCGCAGGAGATCTGCCCTTCAATTAAGAACATTCTGCTTCTAGATTCCGAAGGAAAGCGTGTTGCTGTAAACTACTACTCAGATGATTGGCCAACAAATGCTGCAAAGGAAGCTTTTGAGAAGGCCGTGTTTGCCAAGACTCAAAAGACAAATGCTAGGGCAGAAGGTATGATATCTCTTTTACTGTTGATTTATTTATTTATATTTAGTCATGCTCTTTCCCAATATCTCCCTCTCAACATGCAAAGGAAGCAAAGCTCATTCGGATAGTTAGTGATGTTCCATTCTGCACTAGAGTTGTTTGTGATGCCATCTTATGTAGTATACCTTGCCAGTCTCTGCAAACATTGAGTTCTATTAAACTCTGGTGGTATGTATTAAATCAAGAGCCAAAAACAAAGTTTTGCTAATTTACCAAATAGATCAGTGATGAGTAGGCTGATAATAATAATCTTAGAAGACTTGGCTTTGTGTTGTTTGCTTGCATATCCTCTTCTTGAAGTTGGTTGTTGGTGTGAGATCACTTGTTACATCAGAGTTGTCTTTATGCCAGTGACTAAATTGGACCGTTGTGCTACTACCCCCCTCCCCACCCCCTCTTGGCTGATGAAACTAAATTTTGTGATTGGAAAGGCAACCTTCATCTGTCTGAACTCTCTTCTCACTTCTTCTGCAGCGGAGATTACAATGTTTGATAATTATATTGTTGTCTACAAGTTTGCTCAAGATCTTCATTTCTTTGTTACTGGGAGTGACAATGAAAATGAAATAATCCTTGCCAGTGTTCTCCAAGGATTCTTTGATGCTGTTGGTATTCTTCTTAGGTTGTTTACAAAAGCAGTCTTTTCCTTTTCAATATGCATCCGTTGATATTTTCGTCTTCATGCACTCATCTTGCTGCAAATGCCTTTTGTTTTAGGGGCAATGTAGAAAAGAAGGAGGCACTTGAAAATTTGGACCTTATTCTTTTGTGTCTGGATGAAATTGTTGATGGCGGGTAAGAGAATTGTACCATGATCATTTTATTTGTTTCAAATTCTGAACTATAAAATCTTCGTTTAATGTTGCTTATCTTACTGTTTTGCTGCAACTTTTACTCGATCTTTGTACAAATATAGCATGTCAGGAACCTTTATTCTTTTCTTTTATAGTTATAGAGAATTAGAGCTTCAAAAGCTTATCTAACTTTCTGAACCATAGTAAAATTAATATTTGGATTTAATATGCCACAAATAGGGGGAAAATAAAAGGCAATTGTGTAGTTAATAAGACATTTTGTCTTTGCTGGAGACTTATTAAGACAAGACTTCTGATTAACAGAATCATAGGATACTTCTTACACAAAATTCCCCCCCACCTACCACCACCCCAAAAAAGAACAAATAGAGGAAAAACGAGAACATCAATTATCAAGCCTATAGCAGTGACCTCTTCCCTATGGACATTTTTCTTTCACAAGCTATAAAGCTCTCCTCAGCTTAGCTATTAATCTTATGAGTAATATATAGTGATAGTACATCACACTCCTTATTTTGGACAGTCACTGTATTAGCTATCCTTTTTCTATGTTAGTGACTTCATTCTTATGAAAAGTTGCCTCGTGGGATTGGGTTGAGTGACTTTTTCCTTTGACGGTATATGTTCATTCATCTTAGTCAAGTAGTTTTGCTCTCCTGTTACTTTAGACTCTGGGTGTATTTGATATGCCGAACAATGTTTTACATAGAAAATATTTTTTATCGAAAAATAAGCCTTTTACTTAATTACTTTGGTGTTTGGTAAGTAAACAAAATATTTTTTTTGTCTCGAGAGCATTTACATGCAGTTTTGGAAAATACTATGAATATGCAGCATAGGAAAACACTATGGGGTGTAGAAGGATAGTAGGTAGCCGTTTGTTGTAGTACATTCATGAGGGAGAAGCATGGAGCTAATCTCCTCTTCTCGTCTTCTCTTTATTTAGTAGTGTTACCTTGTATTCGTGTAGTTTCTTATTCTTCATCTTTGTTTATCTTGTTATTTTCCTTTCTATCCTTCTTTGATTGCACTTTTTTGAGCAGAGGGCCTTAGAAACTACTCTTTCCCACTAAAGTAGGGGTAAGCTCTAGGTACATCCTACCTCCCCTCCACCCCCCCAAACCCCACTTGTGGAATTACACTGGTCTCTGCTGTTGTATTATGTGGTGTTGTATTATGTGGTGGACTGCTAAGGGAGTGGGTGGGGGTGGAAACCATGGCTTCGGGAGGAGACAATGAGCTTGGAATGTCAAGTATGACACTTGTTCTCTTCTTCCACTAGGGAAGTCATTTTACTGATTTTGAAGGAACTTGTGTTCTTAGAGAAAATGTTCTCCAAAATCATTTTGACCAACCAAACATGGGAAAATTGGAAAACATTCTCTGTACTAAACACACCCTCAATGTCCACTTCTTCGTCCATCCTAATTCCCCACTTCCACTGTAGAGTTCATACGTTTTTTGACATGCCGTGTTTAGTAATTAGTACATATTAGAGTGTTTGACCTTGAGAATTGATGTGGAAAAAAGAGAATGGAAAAGAAAGCGGACTTCCAATCTTGCTCTCAATTTCAGTTATGGGGAACTAAGTGTTTACAATCTTTTGAATATCCTCCATGTCACTTTCTTGGCTCTGTAGAATCGTTCTTGAAACGGATGCTAATGTTATTGCTGGGAAAGTGGCAAGCAACAGCGTTGATTCTGGGGCACCTTTGTCGGAGCAGGTAAATATTGCTCTCTTTCTCAGTTTCTTGATGCTTTGGTCCTTCAAACGGATGGAATAGTTGCTTCATTAATTACCATCCCCGTCCACTTAACTCATTTTTTCACTACACATCCTTTGTGGTTTTCTACAGACTATAAGTCAAGCATTGGC</genome_strand>
        <mrna_strand>CAAATAGGCTCTTCTCCTCCCTTCTCTACGGCGTGCAATTCTGGTGTGTCCGTACGTCGTGCGATCCGCCATTTTCAACCTCAATTCACCAACAATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATCTGCCCTTCAATTACGAACATTCTGCTTCTAGATTCCGAAGGAAAGCGTGTGGTTGTGAACTACTACTCAGATGATTGGCCAACAAATGCTGCAGAGGAAGCTTTTGAGAAGGCCGTGTTTGCCAAGACTCAAAAGACAAATGCTAGGGCAGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCGATTACAATGTTTGATAATTATATTGGTGACTACAAGTTTGCTCAAGATCTTCATTTCTTTGTTACTGGGAGTGACAGTGAAAAGGAAATAATCCTTGCCAGAGATCTCCAAGGATTCTTGGATGCTGACGGTATTCTTCTTAG...............................................................................................GGGCAATGTAGAAAAGAAGGAGGCACTTGAAAATTGGGACCTTATTCTTTAGTGTCTGGATGAAATAGTTGATGGCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGATCTTGAAACGGATGCTAATGTTATTGCTGGGAAAGTGGCAAGCAACAGCGTTGATTCTGGGGCACCTTTGTCGGAGCAG....................................................................................................................................ACTATAAGTCAAGCATTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E335828" ref_strand="+" ref_description="SGN-E335828 [cTOE-6-M10]">
      <seq>gtcgtgcgatccgccattttcaacctcaattcaccaacaatggagatctgcccttcaattaagaacattctgcttctagattccgaaagaaagcgtgttgctgtaaactactactcagatgattggccaacaaatgctgcaaaggaagcttttgagaaggccgtgtttgccaagactcaaaagacaaatgctaaggcagaagcggagattacaatgtttgataattatattgttgtctacaagtttgctcaagatcttcatttctttgttactgggagtgacaatgaaaatgaaataatccttgccagtgttctccaaggattctttgatgctgttggtattcttcttnagggcaatgtagaaaagaaggaggcacttgaaaatttggaccttattcttttgtgtctggatgaaattgttgatggcggaatcgttcttgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="125248" stop="122585"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="124948" g_stop="124907" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="42" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="124906" i_stop="123876" i_length="1031">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="123875" g_stop="123716" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="202" r_length="160" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="123715" i_stop="123206" i_length="510">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.777" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="123205" g_stop="123058" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="203" r_stop="350" r_length="148" r_score="0.986"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="123057" i_stop="122963" i_length="95">
            <donor d_prob="0.872" d_score="0.96"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="122962" g_stop="122885" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="428" r_length="78" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-E335828" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>428</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E335828" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="124948" e_stop="124907"/>
          <exon e_start="123875" e_stop="123716"/>
          <exon e_start="123205" e_stop="123058"/>
          <exon e_start="122962" e_stop="122885"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCGTGCGATCCGCCATTTTCAACCTCAATTCACCAACAATGGTTAGCTCTCACTCTTTCTCTTTACACTTTTGAGTAATTCTCTTCTTTTTTTTTCAACTAAACTTTTTTGCCCAAAACAAGCTCTTTGTTTTTTTATCACTGATCTTGTGTTGTATGGTTGAATTTATCACTGGTAGAAAAAATTATGCATTTTTGGGGTTTTAGTTTTAGTCGAATTGGAATAGTTGGACTAGTGTTTTTTCGTGATCTCTTTGATTGTCGACGTTTTTCTAGAGTTTTGTTTACTTGGAGGTATAATTGGAAGGGTATATGAATCAGATCTAGCATCTGTAAGTATTCAACAATGGGAAGAAAAAAACTTAAGAATTAAACAAAAGGAAGAGGAAACTTTTTTATGTGGGCAAGTAAGATTATTTGCAGTATATACAGCACCAGTTAGTTTTTTTTTTCCTTTAGGAACGCCCTAATTGGGAGAATACCAATGTTTAAGTTGGCCAGCAACCCACACATTTAAGGCTAATTTGGGTTTATTCTTGGTTTCATGTTTTGAAATGAGATGTTGTATTTACCTTGTTAGAATCGGAATTTTTGCTCAAGAATAAGGAAATGTGGTACTTTATAACTAGGGCGGAGATATTTTATAAAATAGTGAGGATTTTCTATCGAGAGAATAAAGGGAAAGGGTAGCTGAGCGAACTTCTGGTTTAAGGTTTAGTTGCTGGTGACATCTATAGCTGTGTGGGCCATTGAAAGGGAAGGCAATATCTTTTGTGTTGTCGCTGTGCTTGATTTGGAGTATGATTTATGTTGCACGTGTGCTTTAACAGAAAACTAAAAGGAGAATATGTAATGGTGGCTGTATCTTGGAATGTTGAGACTATGGATGAACTTGAACTATTGATAGATAGAACCATAAGCAATTCATGGATGACTGTCTCAAATGTGTCAATATATGCTTTTAACCCATTTCTCTGTAAAACGGGAAAAGAAATTTATCCCTTTTTAAAAATCATATATGGATGGATGTGTAGACATATCCTGCTATAATATCTTTCAAATCCTTTTCGCAGGAGATCTGCCCTTCAATTAAGAACATTCTGCTTCTAGATTCCGAAGGAAAGCGTGTTGCTGTAAACTACTACTCAGATGATTGGCCAACAAATGCTGCAAAGGAAGCTTTTGAGAAGGCCGTGTTTGCCAAGACTCAAAAGACAAATGCTAGGGCAGAAGGTATGATATCTCTTTTACTGTTGATTTATTTATTTATATTTAGTCATGCTCTTTCCCAATATCTCCCTCTCAACATGCAAAGGAAGCAAAGCTCATTCGGATAGTTAGTGATGTTCCATTCTGCACTAGAGTTGTTTGTGATGCCATCTTATGTAGTATACCTTGCCAGTCTCTGCAAACATTGAGTTCTATTAAACTCTGGTGGTATGTATTAAATCAAGAGCCAAAAACAAAGTTTTGCTAATTTACCAAATAGATCAGTGATGAGTAGGCTGATAATAATAATCTTAGAAGACTTGGCTTTGTGTTGTTTGCTTGCATATCCTCTTCTTGAAGTTGGTTGTTGGTGTGAGATCACTTGTTACATCAGAGTTGTCTTTATGCCAGTGACTAAATTGGACCGTTGTGCTACTACCCCCCTCCCCACCCCCTCTTGGCTGATGAAACTAAATTTTGTGATTGGAAAGGCAACCTTCATCTGTCTGAACTCTCTTCTCACTTCTTCTGCAGCGGAGATTACAATGTTTGATAATTATATTGTTGTCTACAAGTTTGCTCAAGATCTTCATTTCTTTGTTACTGGGAGTGACAATGAAAATGAAATAATCCTTGCCAGTGTTCTCCAAGGATTCTTTGATGCTGTTGGTATTCTTCTTAGGTTGTTTACAAAAGCAGTCTTTTCCTTTTCAATATGCATCCGTTGATATTTTCGTCTTCATGCACTCATCTTGCTGCAAATGCCTTTTGTTTTAGGGGCAATGTAGAAAAGAAGGAGGCACTTGAAAATTTGGACCTTATTCTTTTGTGTCTGGATGAAATTGTTGATGGCGG</genome_strand>
        <mrna_strand>GTCGTGCGATCCGCCATTTTCAACCTCAATTCACCAACAATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATCTGCCCTTCAATTAAGAACATTCTGCTTCTAGATTCCGAAAGAAAGCGTGTTGCTGTAAACTACTACTCAGATGATTGGCCAACAAATGCTGCAAAGGAAGCTTTTGAGAAGGCCGTGTTTGCCAAGACTCAAAAGACAAATGCTAAGGCAGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGATTACAATGTTTGATAATTATATTGTTGTCTACAAGTTTGCTCAAGATCTTCATTTCTTTGTTACTGGGAGTGACAATGAAAATGAAATAATCCTTGCCAGTGTTCTCCAAGGATTCTTTGATGCTGTTGGTATTCTTCTTNA...............................................................................................GGGCAATGTAGAAAAGAAGGAGGCACTTGAAAATTTGGACCTTATTCTTTTGTGTCTGGATGAAATTGTTGATGGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E544271" ref_strand="+" ref_description="SGN-E544271 [TUS-66-I8](-)">
      <seq>gcagaggctgccagtgtttgatggggtgctggatcttgtaagatgtggtcatgctgtgaataggtggattccagtgaccatgatggagttcttgctttttgatgttgatagagtgttgagggctggtggatgcctctggttggaccatttctttagtaaaagagcagatcttgagaaggtttttcaacccttgatctggaaattgaactacaagaaggtgaagtggacagtggctaataagaatgatgctagtggtgtgaagaatggggaagtttatttgacagctcttcttcagaagccgctttcgagatgaacatctagtccagataccactgctagatttgaatgatcatttgatgccaaatgctgctatgttgtgtcaagatattctcttcttctcgaggtagagaaatgcgattagtctgcatttggagcgagaatgatccaaacaatagaaagctgtgtgcaccacagaaatacagtttgcagcaaacaacagtagctgctctaatagatagctatttcctttcattcatttgtcagttttggtgtaatctttactgatttcgaaactaaacaatagtagagataacagaactgcaagtttaaaaaagtgattattataaatgtaaagatattgcaggaaagtgaaaaagaacttgctgagttctttgcttcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="128807" stop="125728"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="128507" g_stop="128182" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="326" r_length="326" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="128181" i_stop="126379" i_length="1803">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126378" g_stop="126029" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="678" r_length="352" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="679" polyA_stop="689"/>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-E544271" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>676</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E544271" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="128507" e_stop="128182"/>
          <exon e_start="126378" e_stop="126029"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGAGGCTGCCAGTGTTTGATGGGGTGCTGGATCTTGTAAGATGTGGTCATGCTGTGAATAGGTGGATTCCAGTGACCATGATGGAGTTCTTGCTTTTTGATGTTGATAGAGTGTTGAGGGCTGGTGGATACCTCTGGTTGGACCATTTCTTTAGTAAAAGAGCAGATCTTGAGAAGGTTTTTCAACCCTTGATCTGGAAATTGAACTACAAGAAGGTGAAGTGGACAGTGGCTAATAAGAATGATGCTAGTGGTGTGAAGAATGGGGAAGTTTATTTGACAGCTCTTCTTCAGAAGCCGCTTTCGAGATGAACATCTAGTCCAGGTAACCTCATAGACTCTCTGAAAATGAGATCATATATTGTTTTAGTGGATGGATTATAAACATTGCTAGTAGTGATAGATCTAAAGTAGTTTAGTACTCCTATTACTTTTGGCTTGGCACTGAACTAATGAAAGCACCAATAGACATAATCAAAATCTCCTCGCGTGACTTTGAGAAGCCAAATTATGTCCAAGTAATGCTTGTTCAAAGTTTTATGTCTTTATTATCTACTGCAAATGTAACACTGTAGTAAATATGCACCTTCACTGGTGCACATTTCATATTTGCTAAAAGAAATTAATGGTTTTTGCTTCACTCTCGGCTCACCCTTTTGTTTTTAATAACAATTGTAGCTTGGGATTGAAAGAGCAGATTTCAAATTTTCCATGTTGTGTAGAGATTTAGTGTCCGTTTGGATTAATTTGTGGCTTTTGGCTTATAAGTCATAAGCCAAAAGCCAATCCAAACAGGCCCTTAGTTGATCCAAAGTAAATAATGCTGTATTCTTCATACCTTCTGAGGCTGCCATGTCCCATAGGTATCCAGCTTTAAAGTTGTTTTAAGATGAGCCTGCTACAGATTTGTTTCTCGATACACTATATTATCCATTAAGTGGAGATCCTTCGTAGTAAAAGCCTTTTTTCAGTAAGAACTGTTACCTCTCTGGTGCATTTCTGATGCATTTAGCCTTAGACGGGGAAACTGGCTACTTGAAGTGGAATAATTCAGGTTTGTGGTATGTTTCCTTCTTGTCAGAGTTCTACACTGTCCAAAGTCCTGCGGTGATATCTTTCAATGTACACTCATGTCATTCCAAGAATCTATCTACTTTCCTCTTGCACTATGCTGTCAAGATAATCCACCTAAATGTGACTCTCAATAAGGATCCCTGTCCTGTCCCTTAACTCCAGCATAAACTTATATCATTTGTTGATCCAATTGCGCTTTTGGTATATAATTTGTAAGGTCCTTTATTCTTTATTCTAGTTTATTGAACTATGCATATAGTGCCAGAACATAAAAATGATCTGCAAAAATGACAACTTCCCTTGACAATGTAATTTTATGTCAACAAGAACCCATGTGGCTTAAACACCATTTTCTGATGTACTGAGGGTTCAAAGTCTATTTTCATCTACAAAATATTTCTAGTGGCGATAAGATTCATCAATTAGCTCCAAAATCTACCCATTACCTCTTTATACATATATTGGTAATTTGTATGCATGTTAGTAGTAACCAATAGGTTTCAGATTCAACTGGATGGTCTTCATTCTCCAAAAACTATTCTTAGATGAAGAGTTTTTGATCTCAGAAGGCTGATAAATGGGTCATGTGCAAAGCACTTGACTTTTTTCATCCAAAAATTAAATCCATGTAGAGATGGATTCCATTTAATTAAACACAGTACCTTCCTGCAATTGGTGTCCTATGAATTATCCAACTCAAAGTGATCATTAAGACCCTTAATGAAGGCCATTCTGAATGATTGTTGACAAATTCCCCATGTATAACTGTCACGTGGTGTTGCGTTTCCCGTCTAGCTTGTATGTCAACTGCATGTGATGCACTTTGTTCGCAAACCTGATTGATAACAGCACAGCCAATATAATTCACATTGATTTGACTGTTATAACACAAATCATTATTTCTAATATTTTGATCGGAAATGATTTGGCGCTCTAAACTGATTTGCTCATTAGATTGATTGAATCCTTCTGAAAGCTGCTCAAGTAGATTATCTTTCTCCATCTTTTTCGAGGTTGTTTTAAAATTTCAGCTTTTGCTGTTGTTATTTTGCAGATACCACTGCTAGATTTGAATGATCATTTGATGCCAAATGCTGCTATGTTGTGTCAAGATATTCTCTTCTTCTCGAGGTAGAGAAATGCGATTAGTCTGCATTTGGAGCGAGAATGATCCAAACAATAGAAAGCTGTGTGCACCACAGAAATACAGTTTGCAGCAAACAACAGTAGCTGCTCTAATAGATAGCTATTTCCTTTCATTCATTTGTCAGTTTTGGTGTAATCTTTACTGATTTCGAAACTAAACAATAGTAGAGATAACAGAACTGCAAGTTTAA--AAGTGATTATTATAAATGTAAAGATATTGCAGGAAAGTGAAAAAGAACTTGCTGAGTTCTTTGCTTC</genome_strand>
        <mrna_strand>GCAGAGGCTGCCAGTGTTTGATGGGGTGCTGGATCTTGTAAGATGTGGTCATGCTGTGAATAGGTGGATTCCAGTGACCATGATGGAGTTCTTGCTTTTTGATGTTGATAGAGTGTTGAGGGCTGGTGGATGCCTCTGGTTGGACCATTTCTTTAGTAAAAGAGCAGATCTTGAGAAGGTTTTTCAACCCTTGATCTGGAAATTGAACTACAAGAAGGTGAAGTGGACAGTGGCTAATAAGAATGATGCTAGTGGTGTGAAGAATGGGGAAGTTTATTTGACAGCTCTTCTTCAGAAGCCGCTTTCGAGATGAACATCTAGTCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCACTGCTAGATTTGAATGATCATTTGATGCCAAATGCTGCTATGTTGTGTCAAGATATTCTCTTCTTCTCGAGGTAGAGAAATGCGATTAGTCTGCATTTGGAGCGAGAATGATCCAAACAATAGAAAGCTGTGTGCACCACAGAAATACAGTTTGCAGCAAACAACAGTAGCTGCTCTAATAGATAGCTATTTCCTTTCATTCATTTGTCAGTTTTGGTGTAATCTTTACTGATTTCGAAACTAAACAATAGTAGAGATAACAGAACTGCAAGTTTAAAAAAGTGATTATTATAAATGTAAAGATATTGCAGGAAAGTGAAAAAGAACTTGCTGAGTTCTTTGCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E544272" ref_strand="+" ref_description="SGN-E544272 [TUS-66-I8]">
      <seq>ctgatttgcttcatcagtatatgagctacacaccctttagtctttgcccctcagattcttcagtagctgagtctcttattcttagagggtgtcaccctctacctaggaggcgctgtttttcaagaaccccttctagtatccccgcttctttgcctaaaacccctttttctactatccctgaaaaggccttgttgtggaataattacacttgtaagagcttttcttgtttgtctcagtctaatcccaacttgggatttgatatgaaagttgagcaatcaaaattcttggattttaagtcagatctagatctcccaattccacagtttcttcagctaactaagacctcaaagagtgttattaggctggcactcgatattgggggtggtacaggaacttttgctgcacaaatgaagctgcataatgtgactgttgtgacaacaacaatgaatcttggtgccccttatagtgagactgtggcacttaggggattggtgcctttacatgtacctttgcagcagaggctgccagtgtttgatgggggtgctggatcttgtaagatgtggtcatgctgtgaataggtggattccagtgaccatgatggagttcttgctttttgatgttgatagagtgttgagggctggtggatgcctctggttggnacatttctttagtaaaagagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="129321" stop="128043"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129021" g_stop="128343" g_length="679"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="680" r_length="680" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-E544272" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>679</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E544272" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129021" e_stop="128343"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGATTTGCTTCATCAGTATATGAGCTACACACCCTTTAGTCTTTGCCCCTCAGATTCTTCAGTAGCTGAGTCTCTTATTCTTAGAGGGTGTCACCCTCTACCTAGGAGGCGCTGTTTTTCAAGAACCCCTTCTAGTATCCCCGCTTCTTTGCCTAAAACCCCTTTTTCTACTATCCCTGAAAAGGCCTTGTTGTGGAATAATTACACTTGTAAGAGCTTTTCTTGTTTGTCTCAGTCTAATCCCAACTTGGGATTTGATATGAAAGTTGAGCAATCAAGATTCTTGGATTTTAAGTCAGATCTAGATCTCCCAATTCCACAGTTTCTTCAGCTAACTAAGACCTCAAAGAGTGTTATTAGGCTGGCACTCGATATTGGGGGTGGTACAGGAACTTTTGCTGCACAAATGAAGCTGCATAATGTGACTGTTGTGACAACAACAATGAATCTTGGTGCCCCTTATAGTGAGACTGTGGCACTTAGGGGATTGGTGCCTTTACATGTACCTTTGCAGCAGAGGCTGCCAGTGTTTGAT-GGGGTGCTGGATCTTGTAAGATGTGGTCATGCTGTGAATAGGTGGATTCCAGTGACCATGATGGAGTTCTTGCTTTTTGATGTTGATAGAGTGTTGAGGGCTGGTGGATACCTCTGGTTGGACCATTTCTTTAGTAAAAGAGC</genome_strand>
        <mrna_strand>CTGATTTGCTTCATCAGTATATGAGCTACACACCCTTTAGTCTTTGCCCCTCAGATTCTTCAGTAGCTGAGTCTCTTATTCTTAGAGGGTGTCACCCTCTACCTAGGAGGCGCTGTTTTTCAAGAACCCCTTCTAGTATCCCCGCTTCTTTGCCTAAAACCCCTTTTTCTACTATCCCTGAAAAGGCCTTGTTGTGGAATAATTACACTTGTAAGAGCTTTTCTTGTTTGTCTCAGTCTAATCCCAACTTGGGATTTGATATGAAAGTTGAGCAATCAAAATTCTTGGATTTTAAGTCAGATCTAGATCTCCCAATTCCACAGTTTCTTCAGCTAACTAAGACCTCAAAGAGTGTTATTAGGCTGGCACTCGATATTGGGGGTGGTACAGGAACTTTTGCTGCACAAATGAAGCTGCATAATGTGACTGTTGTGACAACAACAATGAATCTTGGTGCCCCTTATAGTGAGACTGTGGCACTTAGGGGATTGGTGCCTTTACATGTACCTTTGCAGCAGAGGCTGCCAGTGTTTGATGGGGGTGCTGGATCTTGTAAGATGTGGTCATGCTGTGAATAGGTGGATTCCAGTGACCATGATGGAGTTCTTGCTTTTTGATGTTGATAGAGTGTTGAGGGCTGGTGGATGCCTCTGGTTGGNACATTTCTTTAGTAAAAGAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E307444" ref_strand="+" ref_description="SGN-E307444 [cLEY-12-J15]">
      <seq>tgatttgcttcatcagtatatgagctacacaccctttagtctttgcccctcagattcttcagtagctgagtctcttattcttagagggtgtcaccctctacctaggaggcgctgtttttcaagaaccccttctagtatccccgcttctttgcctaaaacccctttttctactatccctgaaaaggccttgttgtggaataattacacttgtaagagcttttcttgtttgtctcagtctaatcccaacttgggatttgatatgaaagttgagcaatcaaaattcttggattttaagtcagatctagatctcccaattccacagtttcttcagctaactaagacctcaaagagtgttattaggctggcactcgatattgggggtggtacaggaacttttgctgcacaaatgaagctgcataatgtgactgttgtgacaacaacaatgaatcttggtgccccttatagtgagactgtggcacttaggggattggtgcctttacatgtacctttgcagcagaggctgccagtgtttgatggggtgctggatcttgtaagatgtggtcatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="129320" stop="128154"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129020" g_stop="128454" g_length="567"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="567" r_length="567" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-E307444" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E307444" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129020" e_stop="128454"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTTGCTTCATCAGTATATGAGCTACACACCCTTTAGTCTTTGCCCCTCAGATTCTTCAGTAGCTGAGTCTCTTATTCTTAGAGGGTGTCACCCTCTACCTAGGAGGCGCTGTTTTTCAAGAACCCCTTCTAGTATCCCCGCTTCTTTGCCTAAAACCCCTTTTTCTACTATCCCTGAAAAGGCCTTGTTGTGGAATAATTACACTTGTAAGAGCTTTTCTTGTTTGTCTCAGTCTAATCCCAACTTGGGATTTGATATGAAAGTTGAGCAATCAAGATTCTTGGATTTTAAGTCAGATCTAGATCTCCCAATTCCACAGTTTCTTCAGCTAACTAAGACCTCAAAGAGTGTTATTAGGCTGGCACTCGATATTGGGGGTGGTACAGGAACTTTTGCTGCACAAATGAAGCTGCATAATGTGACTGTTGTGACAACAACAATGAATCTTGGTGCCCCTTATAGTGAGACTGTGGCACTTAGGGGATTGGTGCCTTTACATGTACCTTTGCAGCAGAGGCTGCCAGTGTTTGATGGGGTGCTGGATCTTGTAAGATGTGGTCATGC</genome_strand>
        <mrna_strand>TGATTTGCTTCATCAGTATATGAGCTACACACCCTTTAGTCTTTGCCCCTCAGATTCTTCAGTAGCTGAGTCTCTTATTCTTAGAGGGTGTCACCCTCTACCTAGGAGGCGCTGTTTTTCAAGAACCCCTTCTAGTATCCCCGCTTCTTTGCCTAAAACCCCTTTTTCTACTATCCCTGAAAAGGCCTTGTTGTGGAATAATTACACTTGTAAGAGCTTTTCTTGTTTGTCTCAGTCTAATCCCAACTTGGGATTTGATATGAAAGTTGAGCAATCAAAATTCTTGGATTTTAAGTCAGATCTAGATCTCCCAATTCCACAGTTTCTTCAGCTAACTAAGACCTCAAAGAGTGTTATTAGGCTGGCACTCGATATTGGGGGTGGTACAGGAACTTTTGCTGCACAAATGAAGCTGCATAATGTGACTGTTGTGACAACAACAATGAATCTTGGTGCCCCTTATAGTGAGACTGTGGCACTTAGGGGATTGGTGCCTTTACATGTACCTTTGCAGCAGAGGCTGCCAGTGTTTGATGGGGTGCTGGATCTTGTAAGATGTGGTCATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>81</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="1260" PGL_stop="312"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="1260" e_stop="889"/>
            <exon e_start="488" e_stop="312"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.678" acc_prob="0.000" e_score="0.995"/>
          <exon-only e_score="0.768"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="1260" e_stop="889" e_length="372"/>
          </exon>
          <intron i_serial="1" don_prob="0.678" acc_prob="0.000">
            <gDNA_intron_boundary i_start="888" i_stop="489" i_length="400"/>
          </intron>
          <exon e_serial="2" e_score="0.768">
            <gDNA_exon_boundary e_start="488" e_stop="312" e_length="177"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1260" stop="889"/>
              <exon start="488" stop="312"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302202" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAGCCCCTTTTTCCTTTGTTTGTTCTTTTCAATGTTTAATTTCTGTACACAATGTTTGTTCTTTTGTAATCGAAGGTGAAGTAGAGTTACAATGGCGATTCCTCTACTGAAAAAGAAAGTTATCAAGAAAAGGGTGAAGCAATTCAAGAGGCATCAGAGTGATAGGAGAATCACTGTTAAGGTATTGTTTTTTTATTTCTTGAAACCCCTCTTTTGCATTAAGCTCTATTGGGTAATAGTGAAAAAAGCTCGTCTCTTTATGGGTTGACAAAAAAATTGGATTTTGTTGGGTTTTTTGTGTTCGAGAGGGAAAATGATGAGAGTTATTGTCGCCCCAGTCTTAATTTGCATCCAATTTATTGGATTCGCAAG : GTGGTGATTGACTCATTATATCTGATTCTTTCTAAACAGTAATGTTTGTTTTATACTTGTTTGGTTTTGGTTTTATTTTGTTTTTTGATGCTAAGCTTGTTTATGGCGACATGCTATATGGTGTGATGATGTGTATCCACCTTTTCTGTAGGGTTCAATGATGAATTCAAATACATG</gDNA_template>
            <first_frame> E  P  L  F  P  L  F  V  L  F  N  V  *  F  L  Y  T  M  F  V  L  L  *  S  K  V  K  *  S  Y  N  G  D  S  S  T  E  K  E  S  Y  Q  E  K  G  E  A  I  Q  E  A  S  E  *  *  E  N  H  C  *  G  I  V  F  L  F  L  E  T  P  L  L  H  *  A  L  L  G  N  S  E  K  S  S  S  L  Y  G  L  T  K  K  L  D  F  V  G  F  F  V  F  E  R  E  N  D  E  S  Y  C  R  P  S  L  N  L  H  P  I  Y  W  I  R  K  :  V  V  I  D  S  L  Y  L  I  L  S  K  Q  *  C  L  F  Y  T  C  L  V  L  V  L  F  C  F  L  M  L  S  L  F  M  A  T  C  Y  M  V  *  *  C  V  S  T  F  S  V  G  F  N  D  E  F  K  Y  M </first_frame>
            <second_frame>  S  P  F  F  L  C  L  F  F  S  M  F  N  F  C  T  Q  C  L  F  F  C  N  R  R  *  S  R  V  T  M  A  I  P  L  L  K  K  K  V  I  K  K  R  V  K  Q  F  K  R  H  Q  S  D  R  R  I  T  V  K  V  L  F  F  Y  F  L  K  P  L  F  C  I  K  L  Y  W  V  I  V  K  K  A  R  L  F  M  G  *  Q  K  N  W  I  L  L  G  F  L  C  S  R  G  K  M  M  R  V  I  V  A  P  V  L  I  C  I  Q  F  I  G  F  A  R :   W  *  L  T  H  Y  I  *  F  F  L  N  S  N  V  C  F  I  L  V  W  F  W  F  Y  F  V  F  *  C  *  A  C  L  W  R  H  A  I  W  C  D  D  V  Y  P  P  F  L  *  G  S  M  M  N  S  N  T   </second_frame>
            <third_frame>   A  P  F  S  F  V  C  S  F  Q  C  L  I  S  V  H  N  V  C  S  F  V  I  E  G  E  V  E  L  Q  W  R  F  L  Y  *  K  R  K  L  S  R  K  G  *  S  N  S  R  G  I  R  V  I  G  E  S  L  L  R  Y  C  F  F  I  S  *  N  P  S  F  A  L  S  S  I  G  *  *  *  K  K  L  V  S  L  W  V  D  K  K  I  G  F  C  W  V  F  C  V  R  E  G  K  *  *  E  L  L  S  P  Q  S  *  F  A  S  N  L  L  D  S  Q   : G  G  D  *  L  I  I  S  D  S  F  *  T  V  M  F  V  L  Y  L  F  G  F  G  F  I  L  F  F  D  A  K  L  V  Y  G  D  M  L  Y  G  V  M  M  C  I  H  L  F  C  R  V  Q  *  *  I  Q  I  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0066C13.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="15345" PGL_stop="10059"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15345" e_stop="15168"/>
            <exon e_start="13373" e_stop="13237"/>
            <exon e_start="13145" e_stop="13011"/>
            <exon e_start="12597" e_stop="12487"/>
            <exon e_start="12376" e_stop="12110"/>
            <exon e_start="10083" e_stop="10059"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.880" e_score="1.000"/>
          <exon-intron don_prob="0.017" acc_prob="0.922" e_score="1.000"/>
          <exon-intron don_prob="0.584" acc_prob="0.943" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.880" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="15345" e_stop="15168" e_length="178"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.880">
            <gDNA_intron_boundary i_start="15167" i_stop="13374" i_length="1794"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="13373" e_stop="13237" e_length="137"/>
          </exon>
          <intron i_serial="2" don_prob="0.017" acc_prob="0.922">
            <gDNA_intron_boundary i_start="13236" i_stop="13146" i_length="91"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="13145" e_stop="13011" e_length="135"/>
          </exon>
          <intron i_serial="3" don_prob="0.584" acc_prob="0.943">
            <gDNA_intron_boundary i_start="13010" i_stop="12598" i_length="413"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="12597" e_stop="12487" e_length="111"/>
          </exon>
          <intron i_serial="4" don_prob="0.985" acc_prob="0.880">
            <gDNA_intron_boundary i_start="12486" i_stop="12377" i_length="110"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="12376" e_stop="12110" e_length="267"/>
          </exon>
          <intron i_serial="5" don_prob="0.992" acc_prob="0.996">
            <gDNA_intron_boundary i_start="12109" i_stop="10084" i_length="2026"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="10083" e_stop="10059" e_length="25"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15345" stop="15168"/>
              <exon start="13373" stop="13237"/>
              <exon start="13145" stop="13011"/>
              <exon start="12597" stop="12487"/>
              <exon start="12376" stop="12110"/>
              <exon start="10083" stop="10059"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E739664" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGCTCCTCTGCTCTTTCCTGTTCTTCAAATTCTATCTCTGCTCCAGTTGGTCTTTGTTGTTCTCAAAGATTAACACTTCCTTTTCGAAATCAAAGAATTGGGTTTCTGGAAAATCCATCAAGCTTGAAGATTTTCCATTTTCACCGAAACACTACCCTCCCTTTGCTGAACTGCACTG : CTACGGAAGAGATCGTGGAGGCTAGTGAAACAGAGGGATTATTTGTTGAAACTGGGTACATATATAGTGTTCATGGGCTTCAAGGTGAGGTTCGAGTAAAAGCGACAACTGATTTCCCTGAATTGCGATTTTCCCAG : CCAGGAAGGCGATGGTTGAGGCAGCAAGTTACAGGGAGAGATATGATTCAAGAAATCGAACTAGTGGAGGGAAGAGGTCATCCAGGACAGAAGAGTTGGATACTTAAATTCCACGAGATTAACACAATTGAGCAG : GCCCAAAAACTTGTGGGGTCGGCCTTACTGGTGAAGAATGAAGATAGACCAATCCTGGAGGAAGGTGAATTTTACACCCCTGACCTTGTTGGGATGAAAGTATTTCTAAAG : GAAACTAGAGAACTGGTAGGAACTGTTATTAATGTTTTCAACAGTGGAGCTAGTGATCTCCTACATGTTGAGCTTCTACCGAATCAAAATGCAAGACCACAGTTGGAAGGAAGTGCATCTGGTCCTCTTGTATGGGTCCCTTTCGTTGAAGCAATTGTTCCAAATATTGATTTGAGTAAAAGGGAAATGCTGATTACACCTCCAAAGGGTCTTTTAGAATTGAACATCCGTGCAGATGAGAGGTCCAAGAAAGAGAGGCGACAGCTT : GAATGGAAAGAGAGAAAAAAGTCTC</gDNA_template>
            <first_frame> G  S  S  A  L  S  C  S  S  N  S  I  S  A  P  V  G  L  C  C  S  Q  R  L  T  L  P  F  R  N  Q  R  I  G  F  L  E  N  P  S  S  L  K  I  F  H  F  H  R  N  T  T  L  P  L  L  N  C  T   : A  T  E  E  I  V  E  A  S  E  T  E  G  L  F  V  E  T  G  Y  I  Y  S  V  H  G  L  Q  G  E  V  R  V  K  A  T  T  D  F  P  E  L  R  F  S  Q  :  P  G  R  R  W  L  R  Q  Q  V  T  G  R  D  M  I  Q  E  I  E  L  V  E  G  R  G  H  P  G  Q  K  S  W  I  L  K  F  H  E  I  N  T  I  E  Q  :  A  Q  K  L  V  G  S  A  L  L  V  K  N  E  D  R  P  I  L  E  E  G  E  F  Y  T  P  D  L  V  G  M  K  V  F  L  K  :  E  T  R  E  L  V  G  T  V  I  N  V  F  N  S  G  A  S  D  L  L  H  V  E  L  L  P  N  Q  N  A  R  P  Q  L  E  G  S  A  S  G  P  L  V  W  V  P  F  V  E  A  I  V  P  N  I  D  L  S  K  R  E  M  L  I  T  P  P  K  G  L  L  E  L  N  I  R  A  D  E  R  S  K  K  E  R  R  Q  L  :  E  W  K  E  R  K  K  S  </first_frame>
            <second_frame>  A  P  L  L  F  P  V  L  Q  I  L  S  L  L  Q  L  V  F  V  V  L  K  D  *  H  F  L  F  E  I  K  E  L  G  F  W  K  I  H  Q  A  *  R  F  S  I  F  T  E  T  L  P  S  L  C  *  T  A  L  :  L  R  K  R  S  W  R  L  V  K  Q  R  D  Y  L  L  K  L  G  T  Y  I  V  F  M  G  F  K  V  R  F  E  *  K  R  Q  L  I  S  L  N  C  D  F  P  S :   Q  E  G  D  G  *  G  S  K  L  Q  G  E  I  *  F  K  K  S  N  *  W  R  E  E  V  I  Q  D  R  R  V  G  Y  L  N  S  T  R  L  T  Q  L  S  R :   P  K  N  L  W  G  R  P  Y  W  *  R  M  K  I  D  Q  S  W  R  K  V  N  F  T  P  L  T  L  L  G  *  K  Y  F  *  R :   K  L  E  N  W  *  E  L  L  L  M  F  S  T  V  E  L  V  I  S  Y  M  L  S  F  Y  R  I  K  M  Q  D  H  S  W  K  E  V  H  L  V  L  L  Y  G  S  L  S  L  K  Q  L  F  Q  I  L  I  *  V  K  G  K  C  *  L  H  L  Q  R  V  F  *  N  *  T  S  V  Q  M  R  G  P  R  K  R  G  D  S  L :   N  G  K  R  E  K  S  L </second_frame>
            <third_frame>   L  L  C  S  F  L  F  F  K  F  Y  L  C  S  S  W  S  L  L  F  S  K  I  N  T  S  F  S  K  S  K  N  W  V  S  G  K  S  I  K  L  E  D  F  P  F  S  P  K  H  Y  P  P  F  A  E  L  H  C :   Y  G  R  D  R  G  G  *  *  N  R  G  I  I  C  *  N  W  V  H  I  *  C  S  W  A  S  R  *  G  S  S  K  S  D  N  *  F  P  *  I  A  I  F  P   : A  R  K  A  M  V  E  A  A  S  Y  R  E  R  Y  D  S  R  N  R  T  S  G  G  K  R  S  S  R  T  E  E  L  D  T  *  I  P  R  D  *  H  N  *  A   : G  P  K  T  C  G  V  G  L  T  G  E  E  *  R  *  T  N  P  G  G  R  *  I  L  H  P  *  P  C  W  D  E  S  I  S  K   : G  N  *  R  T  G  R  N  C  Y  *  C  F  Q  Q  W  S  *  *  S  P  T  C  *  A  S  T  E  S  K  C  K  T  T  V  G  R  K  C  I  W  S  S  C  M  G  P  F  R  *  S  N  C  S  K  Y  *  F  E  *  K  G  N  A  D  Y  T  S  K  G  S  F  R  I  E  H  P  C  R  *  E  V  Q  E  R  E  A  T  A   : *  M  E  R  E  K  K  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15345" stop="15168"/>
                    <exon start="13373" stop="13237"/>
                    <exon start="13145" stop="13011"/>
                    <exon start="12597" stop="12487"/>
                    <exon start="12376" stop="12110"/>
                    <exon start="10083" stop="10060"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>852</number_coding_nucleotides>
                  <number_encoded_amino_acids>284</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSSALSCSSNSISAPVGLCCSQRLTLPFRNQRIGFLENPSSLKIFHFHRNTTLPLLNCTATEEIVEASETEGLFVETGYIYSVHGLQGEVRVKATTDFPELRFSQPGRRWLRQQVTGRDMIQEIELVEGRGHPGQKSWILKFHEINTIEQAQKLVGSALLVKNEDRPILEEGEFYTPDLVGMKVFLKETRELVGTVINVFNSGASDLLHVELLPNQNARPQLEGSASGPLVWVPFVEAIVPNIDLSKREMLITPPKGLLELNIRADERSKKERRQLEWKERKKS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="15335" e_stop="15168"/>
            <exon e_start="13373" e_stop="13319"/>
            <exon e_start="13236" e_stop="13011"/>
            <exon e_start="12597" e_stop="12578"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.880" e_score="0.982"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.945"/>
          <exon-intron don_prob="0.584" acc_prob="0.943" e_score="0.982"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="15335" e_stop="15168" e_length="168"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.880">
            <gDNA_intron_boundary i_start="15167" i_stop="13374" i_length="1794"/>
          </intron>
          <exon e_serial="2" e_score="0.945">
            <gDNA_exon_boundary e_start="13373" e_stop="13319" e_length="55"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="13318" i_stop="13237" i_length="82"/>
          </intron>
          <exon e_serial="3" e_score="0.982">
            <gDNA_exon_boundary e_start="13236" e_stop="13011" e_length="226"/>
          </exon>
          <intron i_serial="3" don_prob="0.584" acc_prob="0.943">
            <gDNA_intron_boundary i_start="13010" i_stop="12598" i_length="413"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="12597" e_stop="12578" e_length="20"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15335" stop="15168"/>
              <exon start="13373" stop="13319"/>
              <exon start="13236" stop="13011"/>
              <exon start="12597" stop="12578"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365223" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTCTTTCCTGTTCTTCAAATTCTATCTCTGCTCCAGTTGGTCTTTGTTGTTCTCAAAGATTAACACTTCCTTTTCGAAATCAAAGAATTGGGTTTCTGGAAAATCCATCAAGCTTGAAGATTTTCCATTTTCACCGAAACACTACCCTCCCTTTGCTGAACTGCACTG : CTACGGAAGAGATCGTGGAGGCTAGTGAAACAGAGGGATTATTTGTTGAAACTGG : GTAGAAAGCATCAGGAACTTAATAATGGGACTGGTTTCTCGTTTTTGGCCTTCATGAGAATATCCTTTTCATGAATTCACTCTTAATTTAGCCAGGAAGGCGATGGTTGAGGCAGCAAGTTACAGGGAGAGATATGATTCAAGAAATCGAACTAGTGGAGGGAAGAGGTCATCCAGGACAGAAGAGTTGGATACTTAAATTCCACGAGATTAACACAATTGAGCAG : GCCCAAAAACTTGTGGGGTC</gDNA_template>
            <first_frame> L  F  P  V  L  Q  I  L  S  L  L  Q  L  V  F  V  V  L  K  D  *  H  F  L  F  E  I  K  E  L  G  F  W  K  I  H  Q  A  *  R  F  S  I  F  T  E  T  L  P  S  L  C  *  T  A  L  :  L  R  K  R  S  W  R  L  V  K  Q  R  D  Y  L  L  K  L   : G  R  K  H  Q  E  L  N  N  G  T  G  F  S  F  L  A  F  M  R  I  S  F  S  *  I  H  S  *  F  S  Q  E  G  D  G  *  G  S  K  L  Q  G  E  I  *  F  K  K  S  N  *  W  R  E  E  V  I  Q  D  R  R  V  G  Y  L  N  S  T  R  L  T  Q  L  S  R :   P  K  N  L  W  G  </first_frame>
            <second_frame>  S  F  L  F  F  K  F  Y  L  C  S  S  W  S  L  L  F  S  K  I  N  T  S  F  S  K  S  K  N  W  V  S  G  K  S  I  K  L  E  D  F  P  F  S  P  K  H  Y  P  P  F  A  E  L  H  C :   Y  G  R  D  R  G  G  *  *  N  R  G  I  I  C  *  N  W  :  V  E  S  I  R  N  L  I  M  G  L  V  S  R  F  W  P  S  *  E  Y  P  F  H  E  F  T  L  N  L  A  R  K  A  M  V  E  A  A  S  Y  R  E  R  Y  D  S  R  N  R  T  S  G  G  K  R  S  S  R  T  E  E  L  D  T  *  I  P  R  D  *  H  N  *  A   : G  P  K  T  C  G  V </second_frame>
            <third_frame>   L  S  C  S  S  N  S  I  S  A  P  V  G  L  C  C  S  Q  R  L  T  L  P  F  R  N  Q  R  I  G  F  L  E  N  P  S  S  L  K  I  F  H  F  H  R  N  T  T  L  P  L  L  N  C  T   : A  T  E  E  I  V  E  A  S  E  T  E  G  L  F  V  E  T  G :   *  K  A  S  G  T  *  *  W  D  W  F  L  V  F  G  L  H  E  N  I  L  F  M  N  S  L  L  I  *  P  G  R  R  W  L  R  Q  Q  V  T  G  R  D  M  I  Q  E  I  E  L  V  E  G  R  G  H  P  G  Q  K  S  W  I  L  K  F  H  E  I  N  T  I  E  Q  :  A  Q  K  L  V  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15333" stop="15168"/>
                    <exon start="13373" stop="13319"/>
                    <exon start="13236" stop="13233"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSCSSNSISAPVGLCCSQRLTLPFRNQRIGFLENPSSLKIFHFHRNTTLPLLNCTATEEIVEASETEGLFVETG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="28659" PGL_stop="29279"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28659" e_stop="29149"/>
            <exon e_start="29236" e_stop="29279"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.996" e_score="0.982"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="28659" e_stop="29149" e_length="491"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.996">
            <gDNA_intron_boundary i_start="29150" i_stop="29235" i_length="86"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="29236" e_stop="29279" e_length="44"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28659" stop="29149"/>
              <exon start="29236" stop="29279"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E358384" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTCCTTGTCAAATCATCAAAAATCTTTCCTCAATTCATCTCAGCACCACCTTCATCATATTGGATCTGCTCCATCTGGTCTTCCCCTTGATAGGCACTTTGGTTTTTACCCAGACTCGTCAATCTTGAGCCCAGGTTTTAGGGGCATGGGTATAGGTACTCGTGATGAAAGTTTGATGGTTAACTATGGTTCTCGTACTACTTTGAATGCTGGTGTTGCTGTTCCAAGGAATATGTCAGACAATGCTTCTCCTAGGTTTGGCATGATCTCTTCCCAAAAACTTAGTCCATTGTTCCTAGGTAATGGTCATTTCCCAGGACATGCAGCTACTAGCTTTGAGGGGCTGACTGAACGCAGTCGCACTCGACGTGTTGAAAATAATAATGGGAACCAGATGGATAACAAGAAGCTCTTTCTACTTGATTTGGATAAGATTAGATGTGGTGAAGATACTCGGACAACTTTGATGATTAAAAATATTCCTAACAA : GTACACCTCCAAGATGCTTTTAGCTGCTATTGACGAACAACATA</gDNA_template>
            <first_frame> F  S  L  S  N  H  Q  K  S  F  L  N  S  S  Q  H  H  L  H  H  I  G  S  A  P  S  G  L  P  L  D  R  H  F  G  F  Y  P  D  S  S  I  L  S  P  G  F  R  G  M  G  I  G  T  R  D  E  S  L  M  V  N  Y  G  S  R  T  T  L  N  A  G  V  A  V  P  R  N  M  S  D  N  A  S  P  R  F  G  M  I  S  S  Q  K  L  S  P  L  F  L  G  N  G  H  F  P  G  H  A  A  T  S  F  E  G  L  T  E  R  S  R  T  R  R  V  E  N  N  N  G  N  Q  M  D  N  K  K  L  F  L  L  D  L  D  K  I  R  C  G  E  D  T  R  T  T  L  M  I  K  N  I  P  N  K :   Y  T  S  K  M  L  L  A  A  I  D  E  Q  H  </first_frame>
            <second_frame>  F  P  C  Q  I  I  K  N  L  S  S  I  H  L  S  T  T  F  I  I  L  D  L  L  H  L  V  F  P  L  I  G  T  L  V  F  T  Q  T  R  Q  S  *  A  Q  V  L  G  A  W  V  *  V  L  V  M  K  V  *  W  L  T  M  V  L  V  L  L  *  M  L  V  L  L  F  Q  G  I  C  Q  T  M  L  L  L  G  L  A  *  S  L  P  K  N  L  V  H  C  S  *  V  M  V  I  S  Q  D  M  Q  L  L  A  L  R  G  *  L  N  A  V  A  L  D  V  L  K  I  I  M  G  T  R  W  I  T  R  S  S  F  Y  L  I  W  I  R  L  D  V  V  K  I  L  G  Q  L  *  *  L  K  I  F  L  T   : S  T  P  P  R  C  F  *  L  L  L  T  N  N  I </second_frame>
            <third_frame>   F  L  V  K  S  S  K  I  F  P  Q  F  I  S  A  P  P  S  S  Y  W  I  C  S  I  W  S  S  P  *  *  A  L  W  F  L  P  R  L  V  N  L  E  P  R  F  *  G  H  G  Y  R  Y  S  *  *  K  F  D  G  *  L  W  F  S  Y  Y  F  E  C  W  C  C  C  S  K  E  Y  V  R  Q  C  F  S  *  V  W  H  D  L  F  P  K  T  *  S  I  V  P  R  *  W  S  F  P  R  T  C  S  Y  *  L  *  G  A  D  *  T  Q  S  H  S  T  C  *  K  *  *  W  E  P  D  G  *  Q  E  A  L  S  T  *  F  G  *  D  *  M  W  *  R  Y  S  D  N  F  D  D  *  K  Y  S  *  Q  :  V  H  L  Q  D  A  F  S  C  Y  *  R  T  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28659" stop="29149"/>
                    <exon start="29236" stop="29278"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>534</number_coding_nucleotides>
                  <number_encoded_amino_acids>178</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FSLSNHQKSFLNSSQHHLHHIGSAPSGLPLDRHFGFYPDSSILSPGFRGMGIGTRDESLMVNYGSRTTLNAGVAVPRNMSDNASPRFGMISSQKLSPLFLGNGHFPGHAATSFEGLTERSRTRRVENNNGNQMDNKKLFLLDLDKIRCGEDTRTTLMIKNIPNKYTSKMLLAAIDEQH</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="29838" PGL_stop="30549"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29838" e_stop="29869"/>
            <exon e_start="30061" e_stop="30549"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.962" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="29838" e_stop="29869" e_length="32"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.962">
            <gDNA_intron_boundary i_start="29870" i_stop="30060" i_length="191"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="30061" e_stop="30549" e_length="489"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29838" stop="29869"/>
              <exon start="30061" stop="30501"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312339" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29840" stop="29869"/>
              <exon start="30061" stop="30549"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539167" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29840" stop="29869"/>
              <exon start="30061" stop="30549"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539170" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29858" stop="29869"/>
              <exon start="30061" stop="30322"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278191" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCACTCAGAAAGTTCAGAATTGGGGGATCAG : ATTGTTCAGGAACATCTTTCATCAGGCTGCAGCCAACCTGAGGATCCAGTTGGCAAATTGGAGAATCGCTAGCAGTAGCATTGAAATGTTTTTTTTTTGCTCGCGGCTTTAAGAGTGCAGCTGGCTAGTACAAGTGTGAGATACATGTGCAGAGTAGCATGATTTGAGGCACAGAATAGAAGTATGAAGATCTTTTGTATTATAATGAGTAGGTGTTTTTGGTTCAAAATCTAAGAGGGGGAGGGTTCTGTTAGACTAAGTACATCAAGCATCTGTGTAGTTCATGTTGTAATCCTATGGCAAGTTGAAATGGCAAAGGCTATCTCAACATGGCATGCAAGGTCGTAGTTTTGTAACATTGTTTTGGTGGTTAGAGTGAAGAGGGGATGCTTGAAATTTGTAAAGTGGGAAGGCAAGCTGGGCTGTTGTTTTGTATCAAACAAGCATTTTGGTATTTATGTGAAACTTGCTAGAAAATTGCATAAAATT</gDNA_template>
            <first_frame> S  T  Q  K  V  Q  N  W  G  I  R :   L  F  R  N  I  F  H  Q  A  A  A  N  L  R  I  Q  L  A  N  W  R  I  A  S  S  S  I  E  M  F  F  F  C  S  R  L  *  E  C  S  W  L  V  Q  V  *  D  T  C  A  E  *  H  D  L  R  H  R  I  E  V  *  R  S  F  V  L  *  *  V  G  V  F  G  S  K  S  K  R  G  R  V  L  L  D  *  V  H  Q  A  S  V  *  F  M  L  *  S  Y  G  K  L  K  W  Q  R  L  S  Q  H  G  M  Q  G  R  S  F  V  T  L  F  W  W  L  E  *  R  G  D  A  *  N  L  *  S  G  K  A  S  W  A  V  V  L  Y  Q  T  S  I  L  V  F  M  *  N  L  L  E  N  C  I  K   </first_frame>
            <second_frame>  P  L  R  K  F  R  I  G  G  S   : D  C  S  G  T  S  F  I  R  L  Q  P  T  *  G  S  S  W  Q  I  G  E  S  L  A  V  A  L  K  C  F  F  F  A  R  G  F  K  S  A  A  G  *  Y  K  C  E  I  H  V  Q  S  S  M  I  *  G  T  E  *  K  Y  E  D  L  L  Y  Y  N  E  *  V  F  L  V  Q  N  L  R  G  G  G  F  C  *  T  K  Y  I  K  H  L  C  S  S  C  C  N  P  M  A  S  *  N  G  K  G  Y  L  N  M  A  C  K  V  V  V  L  *  H  C  F  G  G  *  S  E  E  G  M  L  E  I  C  K  V  G  R  Q  A  G  L  L  F  C  I  K  Q  A  F  W  Y  L  C  E  T  C  *  K  I  A  *  N  </second_frame>
            <third_frame>   H  S  E  S  S  E  L  G  D  Q  :  I  V  Q  E  H  L  S  S  G  C  S  Q  P  E  D  P  V  G  K  L  E  N  R  *  Q  *  H  *  N  V  F  F  L  L  A  A  L  R  V  Q  L  A  S  T  S  V  R  Y  M  C  R  V  A  *  F  E  A  Q  N  R  S  M  K  I  F  C  I  I  M  S  R  C  F  W  F  K  I  *  E  G  E  G  S  V  R  L  S  T  S  S  I  C  V  V  H  V  V  I  L  W  Q  V  E  M  A  K  A  I  S  T  W  H  A  R  S  *  F  C  N  I  V  L  V  V  R  V  K  R  G  C  L  K  F  V  K  W  E  G  K  L  G  C  C  F  V  S  N  K  H  F  G  I  Y  V  K  L  A  R  K  L  H  K  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0066C13.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="35445" PGL_stop="33517"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="35445" e_stop="34773"/>
            <exon e_start="34301" e_stop="33517"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.881" acc_prob="0.983" e_score="0.998"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="35445" e_stop="34773" e_length="673"/>
          </exon>
          <intron i_serial="1" don_prob="0.881" acc_prob="0.983">
            <gDNA_intron_boundary i_start="34772" i_stop="34302" i_length="471"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="34301" e_stop="33517" e_length="785"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35445" stop="34952"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204128" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35062" stop="34773"/>
              <exon start="34301" stop="33967"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345259" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34038" stop="33517"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242931" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34038" stop="33521"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235694" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCAACTGAAGCACAAGTTAAAGATATTGCACAGTGGTTACTAGTTGCTCATAAGGACTCTACAGGTTTAAGTACTGACTGCCTTGCGGATGCTGGTTATCCTGGTGCGGCTTTACTGGGAGATGCTGTTTGTGGCATGGCTACTGCGAGAATTACTTCCAAGGATTTTCTATTCTGGTTCAGGTCTCACACAGCTAAGGAAGTCAAGTGGGGAGGTGCTAAGCATCATCCAGATGATAAAGATGATGGAGGAAAAATGCACCCACGATCTTCATTTAATGCCTTTCTTGAAGTGGTTAAAAGCAGAAGTTTGCCATGGGAGATTCCGGAGATTAATGCCATTCATTCTCTACAAATCATAATGAGAGAATCAATCCAAGAGAACGAAAACAGCTCTCTAAAAACTTTGACTACTTCTCAACAGAATGATGCTGATGGGCCAAGCATGGATGAGCTTAGTTCTGTGGCAATGGAAATGGTTAGATTGATTGAGACAGCCACTGCTCCAATTTTCGGAGTTGATCCATCTGGCTTAATAAATGGATGGAATGAGAAGATTGCTGACTTAACAGGATTGCATGCTAGTGAAGCAGTTGGAATGTCTCTCATTAATGATATTACTCATGAAGATTCACGTGGAACTGTTGAAAAAGTTCTACATAGAGCTCTGTTAG : GTGAGGAGGAAAAAAATGTGGAAATAAAATTGCGAAGGTTTGGGAAAGATCCACCAGGATCAGTTATATACCTTGTGATCAATGCCTGCACAAGCCGGGACCACAAAAATGGTGTTGTTGGTGTGTCCTTTGTGGCTCAAGATGTCACTCCTGAGAAATTTATCATGGATAAATTCATACAGTTGCGAGGAGATTATGAGGCTATTGTACAAAGTCTTAGTCCATTGATTCCACCAATATTTGCTTCTGATGAAAATGCTTGTTGTTCGGAGTGGAATGCAGCAATGGAAAGATTGACTGGTTGGACAAAATATGAGGTCATGGGGAGGACTCTTCCCGGTGAAGTTTTTGGTGGTCTTTGTCGTCTTACGGGACAAGATGCCCTTACAAAATTTATGATTCTTTTCTACCAAGCAATTAGTGGTCATGACACCAAAAAGCTTCCCTTTGGCTTTTTTAATAGGAGAGGAGAGTTTTTGGAAGTGTTCCTAACAGCAAACAAGAGAACTGATGAACATGGGAATGTATGTGGGTGTTTCTGCTTCCTGCAGCCTATGACGATTGACCCAGAAGCATCAGATGAGAGACAAGACTCTAAAGATTCGCTTTGGAAATATAAAGAATATGCTTATGTACTACAGCAGATGAAAAATCCACTGAATGGAATCCAGTTTACCCATAAACTTCTTGAAGCAACCGGTGTTTCAGATAATCAGAAACAGCTTCTGGAGACAAGTGAAGCCTGTGAGAAACAGATACTGTCTGTTATTGACAATATGGATTTT</gDNA_template>
            <first_frame> P  T  E  A  Q  V  K  D  I  A  Q  W  L  L  V  A  H  K  D  S  T  G  L  S  T  D  C  L  A  D  A  G  Y  P  G  A  A  L  L  G  D  A  V  C  G  M  A  T  A  R  I  T  S  K  D  F  L  F  W  F  R  S  H  T  A  K  E  V  K  W  G  G  A  K  H  H  P  D  D  K  D  D  G  G  K  M  H  P  R  S  S  F  N  A  F  L  E  V  V  K  S  R  S  L  P  W  E  I  P  E  I  N  A  I  H  S  L  Q  I  I  M  R  E  S  I  Q  E  N  E  N  S  S  L  K  T  L  T  T  S  Q  Q  N  D  A  D  G  P  S  M  D  E  L  S  S  V  A  M  E  M  V  R  L  I  E  T  A  T  A  P  I  F  G  V  D  P  S  G  L  I  N  G  W  N  E  K  I  A  D  L  T  G  L  H  A  S  E  A  V  G  M  S  L  I  N  D  I  T  H  E  D  S  R  G  T  V  E  K  V  L  H  R  A  L  L   : G  E  E  E  K  N  V  E  I  K  L  R  R  F  G  K  D  P  P  G  S  V  I  Y  L  V  I  N  A  C  T  S  R  D  H  K  N  G  V  V  G  V  S  F  V  A  Q  D  V  T  P  E  K  F  I  M  D  K  F  I  Q  L  R  G  D  Y  E  A  I  V  Q  S  L  S  P  L  I  P  P  I  F  A  S  D  E  N  A  C  C  S  E  W  N  A  A  M  E  R  L  T  G  W  T  K  Y  E  V  M  G  R  T  L  P  G  E  V  F  G  G  L  C  R  L  T  G  Q  D  A  L  T  K  F  M  I  L  F  Y  Q  A  I  S  G  H  D  T  K  K  L  P  F  G  F  F  N  R  R  G  E  F  L  E  V  F  L  T  A  N  K  R  T  D  E  H  G  N  V  C  G  C  F  C  F  L  Q  P  M  T  I  D  P  E  A  S  D  E  R  Q  D  S  K  D  S  L  W  K  Y  K  E  Y  A  Y  V  L  Q  Q  M  K  N  P  L  N  G  I  Q  F  T  H  K  L  L  E  A  T  G  V  S  D  N  Q  K  Q  L  L  E  T  S  E  A  C  E  K  Q  I  L  S  V  I  D  N  M  D  F </first_frame>
            <second_frame>  Q  L  K  H  K  L  K  I  L  H  S  G  Y  *  L  L  I  R  T  L  Q  V  *  V  L  T  A  L  R  M  L  V  I  L  V  R  L  Y  W  E  M  L  F  V  A  W  L  L  R  E  L  L  P  R  I  F  Y  S  G  S  G  L  T  Q  L  R  K  S  S  G  E  V  L  S  I  I  Q  M  I  K  M  M  E  E  K  C  T  H  D  L  H  L  M  P  F  L  K  W  L  K  A  E  V  C  H  G  R  F  R  R  L  M  P  F  I  L  Y  K  S  *  *  E  N  Q  S  K  R  T  K  T  A  L  *  K  L  *  L  L  L  N  R  M  M  L  M  G  Q  A  W  M  S  L  V  L  W  Q  W  K  W  L  D  *  L  R  Q  P  L  L  Q  F  S  E  L  I  H  L  A  *  *  M  D  G  M  R  R  L  L  T  *  Q  D  C  M  L  V  K  Q  L  E  C  L  S  L  M  I  L  L  M  K  I  H  V  E  L  L  K  K  F  Y  I  E  L  C  *  :  V  R  R  K  K  M  W  K  *  N  C  E  G  L  G  K  I  H  Q  D  Q  L  Y  T  L  *  S  M  P  A  Q  A  G  T  T  K  M  V  L  L  V  C  P  L  W  L  K  M  S  L  L  R  N  L  S  W  I  N  S  Y  S  C  E  E  I  M  R  L  L  Y  K  V  L  V  H  *  F  H  Q  Y  L  L  L  M  K  M  L  V  V  R  S  G  M  Q  Q  W  K  D  *  L  V  G  Q  N  M  R  S  W  G  G  L  F  P  V  K  F  L  V  V  F  V  V  L  R  D  K  M  P  L  Q  N  L  *  F  F  S  T  K  Q  L  V  V  M  T  P  K  S  F  P  L  A  F  L  I  G  E  E  S  F  W  K  C  S  *  Q  Q  T  R  E  L  M  N  M  G  M  Y  V  G  V  S  A  S  C  S  L  *  R  L  T  Q  K  H  Q  M  R  D  K  T  L  K  I  R  F  G  N  I  K  N  M  L  M  Y  Y  S  R  *  K  I  H  *  M  E  S  S  L  P  I  N  F  L  K  Q  P  V  F  Q  I  I  R  N  S  F  W  R  Q  V  K  P  V  R  N  R  Y  C  L  L  L  T  I  W  I   </second_frame>
            <third_frame>   N  *  S  T  S  *  R  Y  C  T  V  V  T  S  C  S  *  G  L  Y  R  F  K  Y  *  L  P  C  G  C  W  L  S  W  C  G  F  T  G  R  C  C  L  W  H  G  Y  C  E  N  Y  F  Q  G  F  S  I  L  V  Q  V  S  H  S  *  G  S  Q  V  G  R  C  *  A  S  S  R  *  *  R  *  W  R  K  N  A  P  T  I  F  I  *  C  L  S  *  S  G  *  K  Q  K  F  A  M  G  D  S  G  D  *  C  H  S  F  S  T  N  H  N  E  R  I  N  P  R  E  R  K  Q  L  S  K  N  F  D  Y  F  S  T  E  *  C  *  W  A  K  H  G  *  A  *  F  C  G  N  G  N  G  *  I  D  *  D  S  H  C  S  N  F  R  S  *  S  I  W  L  N  K  W  M  E  *  E  D  C  *  L  N  R  I  A  C  *  *  S  S  W  N  V  S  H  *  *  Y  Y  S  *  R  F  T  W  N  C  *  K  S  S  T  *  S  S  V  R :   *  G  G  K  K  C  G  N  K  I  A  K  V  W  E  R  S  T  R  I  S  Y  I  P  C  D  Q  C  L  H  K  P  G  P  Q  K  W  C  C  W  C  V  L  C  G  S  R  C  H  S  *  E  I  Y  H  G  *  I  H  T  V  A  R  R  L  *  G  Y  C  T  K  S  *  S  I  D  S  T  N  I  C  F  *  *  K  C  L  L  F  G  V  E  C  S  N  G  K  I  D  W  L  D  K  I  *  G  H  G  E  D  S  S  R  *  S  F  W  W  S  L  S  S  Y  G  T  R  C  P  Y  K  I  Y  D  S  F  L  P  S  N  *  W  S  *  H  Q  K  A  S  L  W  L  F  *  *  E  R  R  V  F  G  S  V  P  N  S  K  Q  E  N  *  *  T  W  E  C  M  W  V  F  L  L  P  A  A  Y  D  D  *  P  R  S  I  R  *  E  T  R  L  *  R  F  A  L  E  I  *  R  I  C  L  C  T  T  A  D  E  K  S  T  E  W  N  P  V  Y  P  *  T  S  *  S  N  R  C  F  R  *  S  E  T  A  S  G  D  K  *  S  L  *  E  T  D  T  V  C  Y  *  Q  Y  G  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="35445" stop="34773"/>
                    <exon start="34301" stop="33517"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1458</number_coding_nucleotides>
                  <number_encoded_amino_acids>486</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PTEAQVKDIAQWLLVAHKDSTGLSTDCLADAGYPGAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKDDGGKMHPRSSFNAFLEVVKSRSLPWEIPEINAIHSLQIIMRESIQENENSSLKTLTTSQQNDADGPSMDELSSVAMEMVRLIETATAPIFGVDPSGLINGWNEKIADLTGLHASEAVGMSLINDITHEDSRGTVEKVLHRALLGEEEKNVEIKLRRFGKDPPGSVIYLVINACTSRDHKNGVVGVSFVAQDVTPEKFIMDKFIQLRGDYEAIVQSLSPLIPPIFASDENACCSEWNAAMERLTGWTKYEVMGRTLPGEVFGGLCRLTGQDALTKFMILFYQAISGHDTKKLPFGFFNRRGEFLEVFLTANKRTDEHGNVCGCFCFLQPMTIDPEASDERQDSKDSLWKYKEYAYVLQQMKNPLNGIQFTHKLLEATGVSDNQKQLLETSEACEKQILSVIDNMDF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="49459" PGL_stop="56584"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="49459" e_stop="49520"/>
            <exon e_start="51114" e_stop="51379"/>
            <exon e_start="51567" e_stop="51694"/>
            <exon e_start="53685" e_stop="53808"/>
            <exon e_start="54090" e_stop="54611"/>
            <exon e_start="54867" e_stop="55204"/>
            <exon e_start="55881" e_stop="56391"/>
            <exon e_start="56483" e_stop="56490"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.326" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.923" e_score="0.996"/>
          <exon-intron don_prob="0.996" acc_prob="0.933" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.955" e_score="1.000"/>
          <exon-intron don_prob="0.953" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.990" e_score="0.997"/>
          <exon-intron don_prob="0.000" acc_prob="0.986" e_score="0.998"/>
          <exon-only e_score="0.625"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="49459" e_stop="49520" e_length="62"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.326">
            <gDNA_intron_boundary i_start="49521" i_stop="51113" i_length="1593"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="51114" e_stop="51379" e_length="266"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.923">
            <gDNA_intron_boundary i_start="51380" i_stop="51566" i_length="187"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="51567" e_stop="51694" e_length="128"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.933">
            <gDNA_intron_boundary i_start="51695" i_stop="53684" i_length="1990"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="53685" e_stop="53808" e_length="124"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.955">
            <gDNA_intron_boundary i_start="53809" i_stop="54089" i_length="281"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="54090" e_stop="54611" e_length="522"/>
          </exon>
          <intron i_serial="5" don_prob="0.953" acc_prob="0.974">
            <gDNA_intron_boundary i_start="54612" i_stop="54866" i_length="255"/>
          </intron>
          <exon e_serial="6" e_score="0.997">
            <gDNA_exon_boundary e_start="54867" e_stop="55204" e_length="338"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="0.990">
            <gDNA_intron_boundary i_start="55205" i_stop="55880" i_length="676"/>
          </intron>
          <exon e_serial="7" e_score="0.998">
            <gDNA_exon_boundary e_start="55881" e_stop="56391" e_length="511"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.986">
            <gDNA_intron_boundary i_start="56392" i_stop="56482" i_length="91"/>
          </intron>
          <exon e_serial="8" e_score="0.625">
            <gDNA_exon_boundary e_start="56483" e_stop="56490" e_length="8"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49459" stop="49520"/>
              <exon start="51114" stop="51379"/>
              <exon start="51567" stop="51694"/>
              <exon start="53685" stop="53808"/>
              <exon start="54090" stop="54209"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315268" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49477" stop="49520"/>
              <exon start="51114" stop="51379"/>
              <exon start="51567" stop="51686"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49480" stop="49520"/>
              <exon start="51114" stop="51379"/>
              <exon start="51567" stop="51653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365832" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51114" stop="51379"/>
              <exon start="51567" stop="51694"/>
              <exon start="53685" stop="53749"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51233" stop="51379"/>
              <exon start="51567" stop="51694"/>
              <exon start="53685" stop="53808"/>
              <exon start="54090" stop="54216"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397805" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51234" stop="51379"/>
              <exon start="51567" stop="51694"/>
              <exon start="53685" stop="53808"/>
              <exon start="54090" stop="54298"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51300" stop="51379"/>
              <exon start="51567" stop="51694"/>
              <exon start="53685" stop="53808"/>
              <exon start="54090" stop="54105"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269845" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54135" stop="54611"/>
              <exon start="54867" stop="54895"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252135" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54149" stop="54611"/>
              <exon start="54867" stop="55033"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260093" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54149" stop="54611"/>
              <exon start="54867" stop="54887"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261131" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54291" stop="54611"/>
              <exon start="54867" stop="55204"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370941" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54294" stop="54611"/>
              <exon start="54867" stop="54991"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271471" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54340" stop="54611"/>
              <exon start="54867" stop="55204"/>
              <exon start="55881" stop="56139"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E690262" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54355" stop="54582"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239821" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54409" stop="54611"/>
              <exon start="54867" stop="55159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54441" stop="54611"/>
              <exon start="54867" stop="55124"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328261" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54905" stop="55204"/>
              <exon start="55881" stop="56059"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254148" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54905" stop="55204"/>
              <exon start="55881" stop="56016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254149" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54914" stop="55204"/>
              <exon start="55881" stop="56362"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345119" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55053" stop="55204"/>
              <exon start="55881" stop="56391"/>
              <exon start="56483" stop="56490"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370940" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55964" stop="56391"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244028" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAGAGAGAAAAGCGCGCGTCTAGAGAGAGAAAGTGAGAGAGACGCTTGGTGACTCTACCAG : TCTCTTGTGGCTGATACTATATCTGCTTGAAGGGGTTTTGAATCCCTACTGATGCTTTCAGATCAAGATTGTGCTACACATTCCAAGTACGAATCAAATGCCATCTCTAAGAATGAAGACAAAGCTAGCCACATCCAGTTCGAAAGAAAAAAATGGTCTCCATGTCTGTCCAAATTCTAGTGTCATATCCAAGAGTTCTCTCTCTCGAACCAGAAGTGTGCAGAATGCAGACGAAGTTGCAGATCTGATTCACAATACTCATGATG : TTCCTAGCTACTACAAAGTTCATCCACACCAAGTCGGAAGAAATGGTGATCATGCTAATGATTTGGTAGATGACCTTCTTGAAAAGCAACAGCCACCTGTTACTGATTCTGCAAACCTTGATACCACG : GTTTTGGAATCGGTGCAGGAGTCTACAGTAGTGATCTGCAAACCAAGTTCAGAGACAATCTTTTCACCTAGTGTGGAGCCTGTTAGTGGTGCGCACAGTGAGTCTGATATACCAAGTGATGGAG : CAAACAATGATTTTTATGTACCCCAATTGGAGACTGAAGATAGTGATAGCAGCAGAAGTTCGTGTGAACATCAGACGTGCAATGTTTCAGATTTCTACATCTCTGATATGATTGTTTCTTGTTTGGCTGTTGAGGGTGAAACCATCTATGATAACAGTTTGACTGACAGGTTCTTGGCTGATTACAAGTGTGAAGAACCAAATATTTTTAATAATGTTGATGAGGAATACTTGCTGTTGCCTTTCCTTGAAGACACTGCAGCAGCTAGCTATAGTCAAGTGTGCAGAACGTCTAGTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATTTGCCAGACATATTAGAGAGGCCAAGTATTTTGCCAAACGAATCAGAAACATGCAAACCGATCACCCTAGTACTTGACCTAGATG : AAACACTTGTTCATTCTACACTGGAGCACTGTGACGATGCAGACTTCACATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCAGACATTCTTGGAGAGAGTTGCAGAGATGTTTGACATTGTAATTTTTACTGCTAGTCAGAGCATATATGCGAAGCAATTGTTGGATATTCTGGATCCAGATGGAAAGATTATCTCAAGGCGAGCATATCGTGAATCATGCATCTTCTCTGATGGAAGTTATACAAAGGATTTAACGGTATTAGGTGTTGATCTGGCAAAAGTTGTCATTGTAGATAATTCCCCACAG : GTTTTCAGATTGCAAGTGAATAATGGGATTCCTATTAAGAGTTGGTTTGATGATCCTTCAGACTCTGCACTAATTTCTTTACTTCCATTCCTAGAGACACTGGCTGATGCTGATGATGTCCGACCTATTATTGCTAAGAAATTCGGTAACAAGGAATAAGAGGCCCTTGTTTCTTCCTAGTAGTTCCTCTAACACCTCCTCTCTTCTCATTTAAACAAATTTATCCTTCATTTACATGCTCATTGTTCTATCCTCATTGAGCCTTGATATAATTGGGGTGTGCAATAAAAATACTAGTCCTTTTCTGGTTGAGTCAGTTTTTTTGTGCGCAGTCCTTTTCTTGTTTCCACCCTGTTGACAACTTTCTTCAGTCCATTGCTTACTAATTTGTTTCAAATATAGTTGCAAGAAGTTCTCCTTGTGTGCACTGTACAGTTATATTTGCCTAGTTATTTACAAGCTTGTGTATATGGATTGATCTATTGTGAAATAAATCGTGATTTCGTGTTTC : TAACACAA</gDNA_template>
            <first_frame> R  E  R  K  A  R  V  *  R  E  K  V  R  E  T  L  G  D  S  T  S :   L  L  W  L  I  L  Y  L  L  E  G  V  L  N  P  Y  *  C  F  Q  I  K  I  V  L  H  I  P  S  T  N  Q  M  P  S  L  R  M  K  T  K  L  A  T  S  S  S  K  E  K  N  G  L  H  V  C  P  N  S  S  V  I  S  K  S  S  L  S  R  T  R  S  V  Q  N  A  D  E  V  A  D  L  I  H  N  T  H  D   : V  P  S  Y  Y  K  V  H  P  H  Q  V  G  R  N  G  D  H  A  N  D  L  V  D  D  L  L  E  K  Q  Q  P  P  V  T  D  S  A  N  L  D  T  T  :  V  L  E  S  V  Q  E  S  T  V  V  I  C  K  P  S  S  E  T  I  F  S  P  S  V  E  P  V  S  G  A  H  S  E  S  D  I  P  S  D  G   : A  N  N  D  F  Y  V  P  Q  L  E  T  E  D  S  D  S  S  R  S  S  C  E  H  Q  T  C  N  V  S  D  F  Y  I  S  D  M  I  V  S  C  L  A  V  E  G  E  T  I  Y  D  N  S  L  T  D  R  F  L  A  D  Y  K  C  E  E  P  N  I  F  N  N  V  D  E  E  Y  L  L  L  P  F  L  E  D  T  A  A  A  S  Y  S  Q  V  C  R  T  S  S  E  E  T  A  V  Q  S  D  D  S  S  L  Y  M  A  I  H  Q  L  R  S  S  E  Q  S  D  A  F  T  Y  L  E  S  D  Q  A  E  C  F  D  P  H  I  F  I  R  N  L  P  D  I  L  E  R  P  S  I  L  P  N  E  S  E  T  C  K  P  I  T  L  V  L  D  L  D   : E  T  L  V  H  S  T  L  E  H  C  D  D  A  D  F  T  F  P  V  F  F  S  M  K  E  H  I  V  Y  V  K  Q  R  P  H  L  Q  T  F  L  E  R  V  A  E  M  F  D  I  V  I  F  T  A  S  Q  S  I  Y  A  K  Q  L  L  D  I  L  D  P  D  G  K  I  I  S  R  R  A  Y  R  E  S  C  I  F  S  D  G  S  Y  T  K  D  L  T  V  L  G  V  D  L  A  K  V  V  I  V  D  N  S  P  Q  :  V  F  R  L  Q  V  N  N  G  I  P  I  K  S  W  F  D  D  P  S  D  S  A  L  I  S  L  L  P  F  L  E  T  L  A  D  A  D  D  V  R  P  I  I  A  K  K  F  G  N  K  E  *  E  A  L  V  S  S  *  *  F  L  *  H  L  L  S  S  H  L  N  K  F  I  L  H  L  H  A  H  C  S  I  L  I  E  P  *  Y  N  W  G  V  Q  *  K  Y  *  S  F  S  G  *  V  S  F  F  V  R  S  P  F  L  V  S  T  L  L  T  T  F  F  S  P  L  L  T  N  L  F  Q  I  *  L  Q  E  V  L  L  V  C  T  V  Q  L  Y  L  P  S  Y  L  Q  A  C  V  Y  G  L  I  Y  C  E  I  N  R  D  F  V  F   : L  T  Q </first_frame>
            <second_frame>  E  R  E  K  R  A  S  R  E  R  K  *  E  R  R  L  V  T  L  P   : V  S  C  G  *  Y  Y  I  C  L  K  G  F  *  I  P  T  D  A  F  R  S  R  L  C  Y  T  F  Q  V  R  I  K  C  H  L  *  E  *  R  Q  S  *  P  H  P  V  R  K  K  K  M  V  S  M  S  V  Q  I  L  V  S  Y  P  R  V  L  S  L  E  P  E  V  C  R  M  Q  T  K  L  Q  I  *  F  T  I  L  M  M  :  F  L  A  T  T  K  F  I  H  T  K  S  E  E  M  V  I  M  L  M  I  W  *  M  T  F  L  K  S  N  S  H  L  L  L  I  L  Q  T  L  I  P  R :   F  W  N  R  C  R  S  L  Q  *  *  S  A  N  Q  V  Q  R  Q  S  F  H  L  V  W  S  L  L  V  V  R  T  V  S  L  I  Y  Q  V  M  E  :  Q  T  M  I  F  M  Y  P  N  W  R  L  K  I  V  I  A  A  E  V  R  V  N  I  R  R  A  M  F  Q  I  S  T  S  L  I  *  L  F  L  V  W  L  L  R  V  K  P  S  M  I  T  V  *  L  T  G  S  W  L  I  T  S  V  K  N  Q  I  F  L  I  M  L  M  R  N  T  C  C  C  L  S  L  K  T  L  Q  Q  L  A  I  V  K  C  A  E  R  L  V  K  K  L  L  F  S  L  M  I  R  A  Y  T  W  Q  F  T  S  L  D  H  L  N  N  L  M  L  S  H  I  *  N  L  I  K  Q  N  A  L  T  H  I  Y  S  *  E  I  C  Q  T  Y  *  R  G  Q  V  F  C  Q  T  N  Q  K  H  A  N  R  S  P  *  Y  L  T  *  M  :  K  H  L  F  I  L  H  W  S  T  V  T  M  Q  T  S  H  F  L  F  S  S  A  *  K  N  T  L  S  M  *  N  S  G  L  T  S  R  H  S  W  R  E  L  Q  R  C  L  T  L  *  F  L  L  L  V  R  A  Y  M  R  S  N  C  W  I  F  W  I  Q  M  E  R  L  S  Q  G  E  H  I  V  N  H  A  S  S  L  M  E  V  I  Q  R  I  *  R  Y  *  V  L  I  W  Q  K  L  S  L  *  I  I  P  H  R :   F  S  D  C  K  *  I  M  G  F  L  L  R  V  G  L  M  I  L  Q  T  L  H  *  F  L  Y  F  H  S  *  R  H  W  L  M  L  M  M  S  D  L  L  L  L  R  N  S  V  T  R  N  K  R  P  L  F  L  P  S  S  S  S  N  T  S  S  L  L  I  *  T  N  L  S  F  I  Y  M  L  I  V  L  S  S  L  S  L  D  I  I  G  V  C  N  K  N  T  S  P  F  L  V  E  S  V  F  L  C  A  V  L  F  L  F  P  P  C  *  Q  L  S  S  V  H  C  L  L  I  C  F  K  Y  S  C  K  K  F  S  L  C  A  L  Y  S  Y  I  C  L  V  I  Y  K  L  V  Y  M  D  *  S  I  V  K  *  I  V  I  S  C  F  :  *  H   </second_frame>
            <third_frame>   R  E  K  S  A  R  L  E  R  E  S  E  R  D  A  W  *  L  Y  Q  :  S  L  V  A  D  T  I  S  A  *  R  G  F  E  S  L  L  M  L  S  D  Q  D  C  A  T  H  S  K  Y  E  S  N  A  I  S  K  N  E  D  K  A  S  H  I  Q  F  E  R  K  K  W  S  P  C  L  S  K  F  *  C  H  I  Q  E  F  S  L  S  N  Q  K  C  A  E  C  R  R  S  C  R  S  D  S  Q  Y  S  *  C :   S  *  L  L  Q  S  S  S  T  P  S  R  K  K  W  *  S  C  *  *  F  G  R  *  P  S  *  K  A  T  A  T  C  Y  *  F  C  K  P  *  Y  H   : G  F  G  I  G  A  G  V  Y  S  S  D  L  Q  T  K  F  R  D  N  L  F  T  *  C  G  A  C  *  W  C  A  Q  *  V  *  Y  T  K  *  W  S :   K  Q  *  F  L  C  T  P  I  G  D  *  R  *  *  *  Q  Q  K  F  V  *  T  S  D  V  Q  C  F  R  F  L  H  L  *  Y  D  C  F  L  F  G  C  *  G  *  N  H  L  *  *  Q  F  D  *  Q  V  L  G  *  L  Q  V  *  R  T  K  Y  F  *  *  C  *  *  G  I  L  A  V  A  F  P  *  R  H  C  S  S  *  L  *  S  S  V  Q  N  V  *  *  R  N  C  C  S  V  *  *  F  E  L  I  H  G  N  S  P  A  *  I  I  *  T  I  *  C  F  H  I  F  R  I  *  S  S  R  M  L  *  P  T  Y  I  H  K  K  F  A  R  H  I  R  E  A  K  Y  F  A  K  R  I  R  N  M  Q  T  D  H  P  S  T  *  P  R  * :   N  T  C  S  F  Y  T  G  A  L  *  R  C  R  L  H  I  S  C  F  L  Q  H  E  R  T  H  C  L  C  E  T  A  A  S  P  P  D  I  L  G  E  S  C  R  D  V  *  H  C  N  F  Y  C  *  S  E  H  I  C  E  A  I  V  G  Y  S  G  S  R  W  K  D  Y  L  K  A  S  I  S  *  I  M  H  L  L  *  W  K  L  Y  K  G  F  N  G  I  R  C  *  S  G  K  S  C  H  C  R  *  F  P  T   : G  F  Q  I  A  S  E  *  W  D  S  Y  *  E  L  V  *  *  S  F  R  L  C  T  N  F  F  T  S  I  P  R  D  T  G  *  C  *  *  C  P  T  Y  Y  C  *  E  I  R  *  Q  G  I  R  G  P  C  F  F  L  V  V  P  L  T  P  P  L  F  S  F  K  Q  I  Y  P  S  F  T  C  S  L  F  Y  P  H  *  A  L  I  *  L  G  C  A  I  K  I  L  V  L  F  W  L  S  Q  F  F  C  A  Q  S  F  S  C  F  H  P  V  D  N  F  L  Q  S  I  A  Y  *  F  V  S  N  I  V  A  R  S  S  P  C  V  H  C  T  V  I  F  A  *  L  F  T  S  L  C  I  W  I  D  L  L  *  N  K  S  *  F  R  V  S :   N  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="51166" stop="51379"/>
                    <exon start="51567" stop="51694"/>
                    <exon start="53685" stop="53808"/>
                    <exon start="54090" stop="54611"/>
                    <exon start="54867" stop="55204"/>
                    <exon start="55881" stop="56039"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1482</number_coding_nucleotides>
                  <number_encoded_amino_acids>494</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CFQIKIVLHIPSTNQMPSLRMKTKLATSSSKEKNGLHVCPNSSVISKSSLSRTRSVQNADEVADLIHNTHDVPSYYKVHPHQVGRNGDHANDLVDDLLEKQQPPVTDSANLDTTVLESVQESTVVICKPSSETIFSPSVEPVSGAHSESDIPSDGANNDFYVPQLETEDSDSSRSSCEHQTCNVSDFYISDMIVSCLAVEGETIYDNSLTDRFLADYKCEEPNIFNNVDEEYLLLPFLEDTAAASYSQVCRTSSEETAVQSDDSSLYMAIHQLRSSEQSDAFTYLESDQAECFDPHIFIRNLPDILERPSILPNESETCKPITLVLDLDETLVHSTLEHCDDADFTFPVFFSMKEHIVYVKQRPHLQTFLERVAEMFDIVIFTASQSIYAKQLLDILDPDGKIISRRAYRESCIFSDGSYTKDLTVLGVDLAKVVIVDNSPQVFRLQVNNGIPIKSWFDDPSDSALISLLPFLETLADADDVRPIIAKKFGNKE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="49459" e_stop="49520"/>
            <exon e_start="51114" e_stop="51379"/>
            <exon e_start="51567" e_stop="51694"/>
            <exon e_start="53685" e_stop="53808"/>
            <exon e_start="54090" e_stop="54611"/>
            <exon e_start="54867" e_stop="55204"/>
            <exon e_start="55881" e_stop="56584"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.326" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.923" e_score="0.996"/>
          <exon-intron don_prob="0.996" acc_prob="0.933" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.955" e_score="1.000"/>
          <exon-intron don_prob="0.953" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.990" e_score="0.997"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="49459" e_stop="49520" e_length="62"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.326">
            <gDNA_intron_boundary i_start="49521" i_stop="51113" i_length="1593"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="51114" e_stop="51379" e_length="266"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.923">
            <gDNA_intron_boundary i_start="51380" i_stop="51566" i_length="187"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="51567" e_stop="51694" e_length="128"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.933">
            <gDNA_intron_boundary i_start="51695" i_stop="53684" i_length="1990"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="53685" e_stop="53808" e_length="124"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.955">
            <gDNA_intron_boundary i_start="53809" i_stop="54089" i_length="281"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="54090" e_stop="54611" e_length="522"/>
          </exon>
          <intron i_serial="5" don_prob="0.953" acc_prob="0.974">
            <gDNA_intron_boundary i_start="54612" i_stop="54866" i_length="255"/>
          </intron>
          <exon e_serial="6" e_score="0.997">
            <gDNA_exon_boundary e_start="54867" e_stop="55204" e_length="338"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="0.990">
            <gDNA_intron_boundary i_start="55205" i_stop="55880" i_length="676"/>
          </intron>
          <exon e_serial="7" e_score="0.996">
            <gDNA_exon_boundary e_start="55881" e_stop="56584" e_length="704"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49459" stop="49520"/>
              <exon start="51114" stop="51379"/>
              <exon start="51567" stop="51694"/>
              <exon start="53685" stop="53808"/>
              <exon start="54090" stop="54209"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315268" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49477" stop="49520"/>
              <exon start="51114" stop="51379"/>
              <exon start="51567" stop="51686"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49480" stop="49520"/>
              <exon start="51114" stop="51379"/>
              <exon start="51567" stop="51653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365832" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51114" stop="51379"/>
              <exon start="51567" stop="51694"/>
              <exon start="53685" stop="53749"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51233" stop="51379"/>
              <exon start="51567" stop="51694"/>
              <exon start="53685" stop="53808"/>
              <exon start="54090" stop="54216"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397805" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51234" stop="51379"/>
              <exon start="51567" stop="51694"/>
              <exon start="53685" stop="53808"/>
              <exon start="54090" stop="54298"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51300" stop="51379"/>
              <exon start="51567" stop="51694"/>
              <exon start="53685" stop="53808"/>
              <exon start="54090" stop="54105"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269845" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54135" stop="54611"/>
              <exon start="54867" stop="54895"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252135" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54149" stop="54611"/>
              <exon start="54867" stop="55033"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260093" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54149" stop="54611"/>
              <exon start="54867" stop="54887"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261131" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54291" stop="54611"/>
              <exon start="54867" stop="55204"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370941" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54294" stop="54611"/>
              <exon start="54867" stop="54991"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271471" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54340" stop="54611"/>
              <exon start="54867" stop="55204"/>
              <exon start="55881" stop="56139"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E690262" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54355" stop="54582"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239821" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54409" stop="54611"/>
              <exon start="54867" stop="55159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54441" stop="54611"/>
              <exon start="54867" stop="55124"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328261" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54905" stop="55204"/>
              <exon start="55881" stop="56059"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254148" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54905" stop="55204"/>
              <exon start="55881" stop="56016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254149" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54914" stop="55204"/>
              <exon start="55881" stop="56362"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345119" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55964" stop="56391"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244028" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56081" stop="56584"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274591" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAGAGAGAAAAGCGCGCGTCTAGAGAGAGAAAGTGAGAGAGACGCTTGGTGACTCTACCAG : TCTCTTGTGGCTGATACTATATCTGCTTGAAGGGGTTTTGAATCCCTACTGATGCTTTCAGATCAAGATTGTGCTACACATTCCAAGTACGAATCAAATGCCATCTCTAAGAATGAAGACAAAGCTAGCCACATCCAGTTCGAAAGAAAAAAATGGTCTCCATGTCTGTCCAAATTCTAGTGTCATATCCAAGAGTTCTCTCTCTCGAACCAGAAGTGTGCAGAATGCAGACGAAGTTGCAGATCTGATTCACAATACTCATGATG : TTCCTAGCTACTACAAAGTTCATCCACACCAAGTCGGAAGAAATGGTGATCATGCTAATGATTTGGTAGATGACCTTCTTGAAAAGCAACAGCCACCTGTTACTGATTCTGCAAACCTTGATACCACG : GTTTTGGAATCGGTGCAGGAGTCTACAGTAGTGATCTGCAAACCAAGTTCAGAGACAATCTTTTCACCTAGTGTGGAGCCTGTTAGTGGTGCGCACAGTGAGTCTGATATACCAAGTGATGGAG : CAAACAATGATTTTTATGTACCCCAATTGGAGACTGAAGATAGTGATAGCAGCAGAAGTTCGTGTGAACATCAGACGTGCAATGTTTCAGATTTCTACATCTCTGATATGATTGTTTCTTGTTTGGCTGTTGAGGGTGAAACCATCTATGATAACAGTTTGACTGACAGGTTCTTGGCTGATTACAAGTGTGAAGAACCAAATATTTTTAATAATGTTGATGAGGAATACTTGCTGTTGCCTTTCCTTGAAGACACTGCAGCAGCTAGCTATAGTCAAGTGTGCAGAACGTCTAGTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATTTGCCAGACATATTAGAGAGGCCAAGTATTTTGCCAAACGAATCAGAAACATGCAAACCGATCACCCTAGTACTTGACCTAGATG : AAACACTTGTTCATTCTACACTGGAGCACTGTGACGATGCAGACTTCACATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCAGACATTCTTGGAGAGAGTTGCAGAGATGTTTGACATTGTAATTTTTACTGCTAGTCAGAGCATATATGCGAAGCAATTGTTGGATATTCTGGATCCAGATGGAAAGATTATCTCAAGGCGAGCATATCGTGAATCATGCATCTTCTCTGATGGAAGTTATACAAAGGATTTAACGGTATTAGGTGTTGATCTGGCAAAAGTTGTCATTGTAGATAATTCCCCACAG : GTTTTCAGATTGCAAGTGAATAATGGGATTCCTATTAAGAGTTGGTTTGATGATCCTTCAGACTCTGCACTAATTTCTTTACTTCCATTCCTAGAGACACTGGCTGATGCTGATGATGTCCGACCTATTATTGCTAAGAAATTCGGTAACAAGGAATAAGAGGCCCTTGTTTCTTCCTAGTAGTTCCTCTAACACCTCCTCTCTTCTCATTTAAACAAATTTATCCTTCATTTACATGCTCATTGTTCTATCCTCATTGAGCCTTGATATAATTGGGGTGTGCAATAAAAATACTAGTCCTTTTCTGGTTGAGTCAGTTTTTTTGTGCGCAGTCCTTTTCTTGTTTCCACCCTGTTGACAACTTTCTTCAGTCCATTGCTTACTAATTTGTTTCAAATATAGTTGCAAGAAGTTCTCCTTGTGTGCACTGTACAGTTATATTTGCCTAGTTATTTACAAGCTTGTGTATATGGATTGATCTATTGTGAAATAAATCGTGATTTCGTGTTTCGTTATCGTAGCATAAAGCTGTCCGTTGGACTAAATTACACCTGTTCATTGTATAGCCTTTGCACAATCTAGTGTACTTGTCAATTTTGCAGTAACACAAGTTCCCAATCAAAGGCTAATTGGCCAAAAACATCAGGGTTGGCAGTCGAAATAGGTTTAGAAGATATTTGGATCATCATTAGATGATTCTTTAA</gDNA_template>
            <first_frame> R  E  R  K  A  R  V  *  R  E  K  V  R  E  T  L  G  D  S  T  S :   L  L  W  L  I  L  Y  L  L  E  G  V  L  N  P  Y  *  C  F  Q  I  K  I  V  L  H  I  P  S  T  N  Q  M  P  S  L  R  M  K  T  K  L  A  T  S  S  S  K  E  K  N  G  L  H  V  C  P  N  S  S  V  I  S  K  S  S  L  S  R  T  R  S  V  Q  N  A  D  E  V  A  D  L  I  H  N  T  H  D   : V  P  S  Y  Y  K  V  H  P  H  Q  V  G  R  N  G  D  H  A  N  D  L  V  D  D  L  L  E  K  Q  Q  P  P  V  T  D  S  A  N  L  D  T  T  :  V  L  E  S  V  Q  E  S  T  V  V  I  C  K  P  S  S  E  T  I  F  S  P  S  V  E  P  V  S  G  A  H  S  E  S  D  I  P  S  D  G   : A  N  N  D  F  Y  V  P  Q  L  E  T  E  D  S  D  S  S  R  S  S  C  E  H  Q  T  C  N  V  S  D  F  Y  I  S  D  M  I  V  S  C  L  A  V  E  G  E  T  I  Y  D  N  S  L  T  D  R  F  L  A  D  Y  K  C  E  E  P  N  I  F  N  N  V  D  E  E  Y  L  L  L  P  F  L  E  D  T  A  A  A  S  Y  S  Q  V  C  R  T  S  S  E  E  T  A  V  Q  S  D  D  S  S  L  Y  M  A  I  H  Q  L  R  S  S  E  Q  S  D  A  F  T  Y  L  E  S  D  Q  A  E  C  F  D  P  H  I  F  I  R  N  L  P  D  I  L  E  R  P  S  I  L  P  N  E  S  E  T  C  K  P  I  T  L  V  L  D  L  D   : E  T  L  V  H  S  T  L  E  H  C  D  D  A  D  F  T  F  P  V  F  F  S  M  K  E  H  I  V  Y  V  K  Q  R  P  H  L  Q  T  F  L  E  R  V  A  E  M  F  D  I  V  I  F  T  A  S  Q  S  I  Y  A  K  Q  L  L  D  I  L  D  P  D  G  K  I  I  S  R  R  A  Y  R  E  S  C  I  F  S  D  G  S  Y  T  K  D  L  T  V  L  G  V  D  L  A  K  V  V  I  V  D  N  S  P  Q  :  V  F  R  L  Q  V  N  N  G  I  P  I  K  S  W  F  D  D  P  S  D  S  A  L  I  S  L  L  P  F  L  E  T  L  A  D  A  D  D  V  R  P  I  I  A  K  K  F  G  N  K  E  *  E  A  L  V  S  S  *  *  F  L  *  H  L  L  S  S  H  L  N  K  F  I  L  H  L  H  A  H  C  S  I  L  I  E  P  *  Y  N  W  G  V  Q  *  K  Y  *  S  F  S  G  *  V  S  F  F  V  R  S  P  F  L  V  S  T  L  L  T  T  F  F  S  P  L  L  T  N  L  F  Q  I  *  L  Q  E  V  L  L  V  C  T  V  Q  L  Y  L  P  S  Y  L  Q  A  C  V  Y  G  L  I  Y  C  E  I  N  R  D  F  V  F  R  Y  R  S  I  K  L  S  V  G  L  N  Y  T  C  S  L  Y  S  L  C  T  I  *  C  T  C  Q  F  C  S  N  T  S  S  Q  S  K  A  N  W  P  K  T  S  G  L  A  V  E  I  G  L  E  D  I  W  I  I  I  R  *  F  F   </first_frame>
            <second_frame>  E  R  E  K  R  A  S  R  E  R  K  *  E  R  R  L  V  T  L  P   : V  S  C  G  *  Y  Y  I  C  L  K  G  F  *  I  P  T  D  A  F  R  S  R  L  C  Y  T  F  Q  V  R  I  K  C  H  L  *  E  *  R  Q  S  *  P  H  P  V  R  K  K  K  M  V  S  M  S  V  Q  I  L  V  S  Y  P  R  V  L  S  L  E  P  E  V  C  R  M  Q  T  K  L  Q  I  *  F  T  I  L  M  M  :  F  L  A  T  T  K  F  I  H  T  K  S  E  E  M  V  I  M  L  M  I  W  *  M  T  F  L  K  S  N  S  H  L  L  L  I  L  Q  T  L  I  P  R :   F  W  N  R  C  R  S  L  Q  *  *  S  A  N  Q  V  Q  R  Q  S  F  H  L  V  W  S  L  L  V  V  R  T  V  S  L  I  Y  Q  V  M  E  :  Q  T  M  I  F  M  Y  P  N  W  R  L  K  I  V  I  A  A  E  V  R  V  N  I  R  R  A  M  F  Q  I  S  T  S  L  I  *  L  F  L  V  W  L  L  R  V  K  P  S  M  I  T  V  *  L  T  G  S  W  L  I  T  S  V  K  N  Q  I  F  L  I  M  L  M  R  N  T  C  C  C  L  S  L  K  T  L  Q  Q  L  A  I  V  K  C  A  E  R  L  V  K  K  L  L  F  S  L  M  I  R  A  Y  T  W  Q  F  T  S  L  D  H  L  N  N  L  M  L  S  H  I  *  N  L  I  K  Q  N  A  L  T  H  I  Y  S  *  E  I  C  Q  T  Y  *  R  G  Q  V  F  C  Q  T  N  Q  K  H  A  N  R  S  P  *  Y  L  T  *  M  :  K  H  L  F  I  L  H  W  S  T  V  T  M  Q  T  S  H  F  L  F  S  S  A  *  K  N  T  L  S  M  *  N  S  G  L  T  S  R  H  S  W  R  E  L  Q  R  C  L  T  L  *  F  L  L  L  V  R  A  Y  M  R  S  N  C  W  I  F  W  I  Q  M  E  R  L  S  Q  G  E  H  I  V  N  H  A  S  S  L  M  E  V  I  Q  R  I  *  R  Y  *  V  L  I  W  Q  K  L  S  L  *  I  I  P  H  R :   F  S  D  C  K  *  I  M  G  F  L  L  R  V  G  L  M  I  L  Q  T  L  H  *  F  L  Y  F  H  S  *  R  H  W  L  M  L  M  M  S  D  L  L  L  L  R  N  S  V  T  R  N  K  R  P  L  F  L  P  S  S  S  S  N  T  S  S  L  L  I  *  T  N  L  S  F  I  Y  M  L  I  V  L  S  S  L  S  L  D  I  I  G  V  C  N  K  N  T  S  P  F  L  V  E  S  V  F  L  C  A  V  L  F  L  F  P  P  C  *  Q  L  S  S  V  H  C  L  L  I  C  F  K  Y  S  C  K  K  F  S  L  C  A  L  Y  S  Y  I  C  L  V  I  Y  K  L  V  Y  M  D  *  S  I  V  K  *  I  V  I  S  C  F  V  I  V  A  *  S  C  P  L  D  *  I  T  P  V  H  C  I  A  F  A  Q  S  S  V  L  V  N  F  A  V  T  Q  V  P  N  Q  R  L  I  G  Q  K  H  Q  G  W  Q  S  K  *  V  *  K  I  F  G  S  S  L  D  D  S  L  </second_frame>
            <third_frame>   R  E  K  S  A  R  L  E  R  E  S  E  R  D  A  W  *  L  Y  Q  :  S  L  V  A  D  T  I  S  A  *  R  G  F  E  S  L  L  M  L  S  D  Q  D  C  A  T  H  S  K  Y  E  S  N  A  I  S  K  N  E  D  K  A  S  H  I  Q  F  E  R  K  K  W  S  P  C  L  S  K  F  *  C  H  I  Q  E  F  S  L  S  N  Q  K  C  A  E  C  R  R  S  C  R  S  D  S  Q  Y  S  *  C :   S  *  L  L  Q  S  S  S  T  P  S  R  K  K  W  *  S  C  *  *  F  G  R  *  P  S  *  K  A  T  A  T  C  Y  *  F  C  K  P  *  Y  H   : G  F  G  I  G  A  G  V  Y  S  S  D  L  Q  T  K  F  R  D  N  L  F  T  *  C  G  A  C  *  W  C  A  Q  *  V  *  Y  T  K  *  W  S :   K  Q  *  F  L  C  T  P  I  G  D  *  R  *  *  *  Q  Q  K  F  V  *  T  S  D  V  Q  C  F  R  F  L  H  L  *  Y  D  C  F  L  F  G  C  *  G  *  N  H  L  *  *  Q  F  D  *  Q  V  L  G  *  L  Q  V  *  R  T  K  Y  F  *  *  C  *  *  G  I  L  A  V  A  F  P  *  R  H  C  S  S  *  L  *  S  S  V  Q  N  V  *  *  R  N  C  C  S  V  *  *  F  E  L  I  H  G  N  S  P  A  *  I  I  *  T  I  *  C  F  H  I  F  R  I  *  S  S  R  M  L  *  P  T  Y  I  H  K  K  F  A  R  H  I  R  E  A  K  Y  F  A  K  R  I  R  N  M  Q  T  D  H  P  S  T  *  P  R  * :   N  T  C  S  F  Y  T  G  A  L  *  R  C  R  L  H  I  S  C  F  L  Q  H  E  R  T  H  C  L  C  E  T  A  A  S  P  P  D  I  L  G  E  S  C  R  D  V  *  H  C  N  F  Y  C  *  S  E  H  I  C  E  A  I  V  G  Y  S  G  S  R  W  K  D  Y  L  K  A  S  I  S  *  I  M  H  L  L  *  W  K  L  Y  K  G  F  N  G  I  R  C  *  S  G  K  S  C  H  C  R  *  F  P  T   : G  F  Q  I  A  S  E  *  W  D  S  Y  *  E  L  V  *  *  S  F  R  L  C  T  N  F  F  T  S  I  P  R  D  T  G  *  C  *  *  C  P  T  Y  Y  C  *  E  I  R  *  Q  G  I  R  G  P  C  F  F  L  V  V  P  L  T  P  P  L  F  S  F  K  Q  I  Y  P  S  F  T  C  S  L  F  Y  P  H  *  A  L  I  *  L  G  C  A  I  K  I  L  V  L  F  W  L  S  Q  F  F  C  A  Q  S  F  S  C  F  H  P  V  D  N  F  L  Q  S  I  A  Y  *  F  V  S  N  I  V  A  R  S  S  P  C  V  H  C  T  V  I  F  A  *  L  F  T  S  L  C  I  W  I  D  L  L  *  N  K  S  *  F  R  V  S  L  S  *  H  K  A  V  R  W  T  K  L  H  L  F  I  V  *  P  L  H  N  L  V  Y  L  S  I  L  Q  *  H  K  F  P  I  K  G  *  L  A  K  N  I  R  V  G  S  R  N  R  F  R  R  Y  L  D  H  H  *  M  I  L  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="51166" stop="51379"/>
                    <exon start="51567" stop="51694"/>
                    <exon start="53685" stop="53808"/>
                    <exon start="54090" stop="54611"/>
                    <exon start="54867" stop="55204"/>
                    <exon start="55881" stop="56039"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1482</number_coding_nucleotides>
                  <number_encoded_amino_acids>494</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CFQIKIVLHIPSTNQMPSLRMKTKLATSSSKEKNGLHVCPNSSVISKSSLSRTRSVQNADEVADLIHNTHDVPSYYKVHPHQVGRNGDHANDLVDDLLEKQQPPVTDSANLDTTVLESVQESTVVICKPSSETIFSPSVEPVSGAHSESDIPSDGANNDFYVPQLETEDSDSSRSSCEHQTCNVSDFYISDMIVSCLAVEGETIYDNSLTDRFLADYKCEEPNIFNNVDEEYLLLPFLEDTAAASYSQVCRTSSEETAVQSDDSSLYMAIHQLRSSEQSDAFTYLESDQAECFDPHIFIRNLPDILERPSILPNESETCKPITLVLDLDETLVHSTLEHCDDADFTFPVFFSMKEHIVYVKQRPHLQTFLERVAEMFDIVIFTASQSIYAKQLLDILDPDGKIISRRAYRESCIFSDGSYTKDLTVLGVDLAKVVIVDNSPQVFRLQVNNGIPIKSWFDDPSDSALISLLPFLETLADADDVRPIIAKKFGNKE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="49477" e_stop="49520"/>
            <exon e_start="51114" e_stop="51379"/>
            <exon e_start="51567" e_stop="51694"/>
            <exon e_start="53685" e_stop="53772"/>
            <exon e_start="54090" e_stop="54611"/>
            <exon e_start="54867" e_stop="55204"/>
            <exon e_start="55881" e_stop="56391"/>
            <exon e_start="56483" e_stop="56490"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.326" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.923" e_score="0.996"/>
          <exon-intron don_prob="0.996" acc_prob="0.933" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.955" e_score="0.989"/>
          <exon-intron don_prob="0.953" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.990" e_score="0.997"/>
          <exon-intron don_prob="0.000" acc_prob="0.986" e_score="0.998"/>
          <exon-only e_score="0.625"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="49477" e_stop="49520" e_length="44"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.326">
            <gDNA_intron_boundary i_start="49521" i_stop="51113" i_length="1593"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="51114" e_stop="51379" e_length="266"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.923">
            <gDNA_intron_boundary i_start="51380" i_stop="51566" i_length="187"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="51567" e_stop="51694" e_length="128"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.933">
            <gDNA_intron_boundary i_start="51695" i_stop="53684" i_length="1990"/>
          </intron>
          <exon e_serial="4" e_score="0.989">
            <gDNA_exon_boundary e_start="53685" e_stop="53772" e_length="88"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.955">
            <gDNA_intron_boundary i_start="53773" i_stop="54089" i_length="317"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="54090" e_stop="54611" e_length="522"/>
          </exon>
          <intron i_serial="5" don_prob="0.953" acc_prob="0.974">
            <gDNA_intron_boundary i_start="54612" i_stop="54866" i_length="255"/>
          </intron>
          <exon e_serial="6" e_score="0.997">
            <gDNA_exon_boundary e_start="54867" e_stop="55204" e_length="338"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="0.990">
            <gDNA_intron_boundary i_start="55205" i_stop="55880" i_length="676"/>
          </intron>
          <exon e_serial="7" e_score="0.998">
            <gDNA_exon_boundary e_start="55881" e_stop="56391" e_length="511"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.986">
            <gDNA_intron_boundary i_start="56392" i_stop="56482" i_length="91"/>
          </intron>
          <exon e_serial="8" e_score="0.625">
            <gDNA_exon_boundary e_start="56483" e_stop="56490" e_length="8"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49477" stop="49520"/>
              <exon start="51114" stop="51379"/>
              <exon start="51567" stop="51686"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49480" stop="49520"/>
              <exon start="51114" stop="51379"/>
              <exon start="51567" stop="51653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365832" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51114" stop="51379"/>
              <exon start="51567" stop="51694"/>
              <exon start="53685" stop="53749"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53685" stop="53772"/>
              <exon start="54090" stop="54527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247729" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54135" stop="54611"/>
              <exon start="54867" stop="54895"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252135" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54149" stop="54611"/>
              <exon start="54867" stop="55033"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260093" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54149" stop="54611"/>
              <exon start="54867" stop="54887"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261131" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54291" stop="54611"/>
              <exon start="54867" stop="55204"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370941" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54294" stop="54611"/>
              <exon start="54867" stop="54991"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271471" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54340" stop="54611"/>
              <exon start="54867" stop="55204"/>
              <exon start="55881" stop="56139"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E690262" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54355" stop="54582"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239821" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54409" stop="54611"/>
              <exon start="54867" stop="55159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54441" stop="54611"/>
              <exon start="54867" stop="55124"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328261" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54905" stop="55204"/>
              <exon start="55881" stop="56059"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254148" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54905" stop="55204"/>
              <exon start="55881" stop="56016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254149" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54914" stop="55204"/>
              <exon start="55881" stop="56362"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345119" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55053" stop="55204"/>
              <exon start="55881" stop="56391"/>
              <exon start="56483" stop="56490"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370940" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55964" stop="56391"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244028" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTCTAGAGAGAGAAAGTGAGAGAGACGCTTGGTGACTCTACCAG : TCTCTTGTGGCTGATACTATATCTGCTTGAAGGGGTTTTGAATCCCTACTGATGCTTTCAGATCAAGATTGTGCTACACATTCCAAGTACGAATCAAATGCCATCTCTAAGAATGAAGACAAAGCTAGCCACATCCAGTTCGAAAGAAAAAAATGGTCTCCATGTCTGTCCAAATTCTAGTGTCATATCCAAGAGTTCTCTCTCTCGAACCAGAAGTGTGCAGAATGCAGACGAAGTTGCAGATCTGATTCACAATACTCATGATG : TTCCTAGCTACTACAAAGTTCATCCACACCAAGTCGGAAGAAATGGTGATCATGCTAATGATTTGGTAGATGACCTTCTTGAAAAGCAACAGCCACCTGTTACTGATTCTGCAAACCTTGATACCACG : GTTTTGGAATCGGTGCAGGAGTCTACAGTAGTGATCTGCAAACCAAGTTCAGAGACAATCTTTTCACCTAGTGTGGAGCCTGTTAGTG : CAAACAATGATTTTTATGTACCCCAATTGGAGACTGAAGATAGTGATAGCAGCAGAAGTTCGTGTGAACATCAGACGTGCAATGTTTCAGATTTCTACATCTCTGATATGATTGTTTCTTGTTTGGCTGTTGAGGGTGAAACCATCTATGATAACAGTTTGACTGACAGGTTCTTGGCTGATTACAAGTGTGAAGAACCAAATATTTTTAATAATGTTGATGAGGAATACTTGCTGTTGCCTTTCCTTGAAGACACTGCAGCAGCTAGCTATAGTCAAGTGTGCAGAACGTCTAGTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATTTGCCAGACATATTAGAGAGGCCAAGTATTTTGCCAAACGAATCAGAAACATGCAAACCGATCACCCTAGTACTTGACCTAGATG : AAACACTTGTTCATTCTACACTGGAGCACTGTGACGATGCAGACTTCACATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCAGACATTCTTGGAGAGAGTTGCAGAGATGTTTGACATTGTAATTTTTACTGCTAGTCAGAGCATATATGCGAAGCAATTGTTGGATATTCTGGATCCAGATGGAAAGATTATCTCAAGGCGAGCATATCGTGAATCATGCATCTTCTCTGATGGAAGTTATACAAAGGATTTAACGGTATTAGGTGTTGATCTGGCAAAAGTTGTCATTGTAGATAATTCCCCACAG : GTTTTCAGATTGCAAGTGAATAATGGGATTCCTATTAAGAGTTGGTTTGATGATCCTTCAGACTCTGCACTAATTTCTTTACTTCCATTCCTAGAGACACTGGCTGATGCTGATGATGTCCGACCTATTATTGCTAAGAAATTCGGTAACAAGGAATAAGAGGCCCTTGTTTCTTCCTAGTAGTTCCTCTAACACCTCCTCTCTTCTCATTTAAACAAATTTATCCTTCATTTACATGCTCATTGTTCTATCCTCATTGAGCCTTGATATAATTGGGGTGTGCAATAAAAATACTAGTCCTTTTCTGGTTGAGTCAGTTTTTTTGTGCGCAGTCCTTTTCTTGTTTCCACCCTGTTGACAACTTTCTTCAGTCCATTGCTTACTAATTTGTTTCAAATATAGTTGCAAGAAGTTCTCCTTGTGTGCACTGTACAGTTATATTTGCCTAGTTATTTACAAGCTTGTGTATATGGATTGATCTATTGTGAAATAAATCGTGATTTCGTGTTTC : TAACACAA</gDNA_template>
            <first_frame> V  *  R  E  K  V  R  E  T  L  G  D  S  T  S :   L  L  W  L  I  L  Y  L  L  E  G  V  L  N  P  Y  *  C  F  Q  I  K  I  V  L  H  I  P  S  T  N  Q  M  P  S  L  R  M  K  T  K  L  A  T  S  S  S  K  E  K  N  G  L  H  V  C  P  N  S  S  V  I  S  K  S  S  L  S  R  T  R  S  V  Q  N  A  D  E  V  A  D  L  I  H  N  T  H  D   : V  P  S  Y  Y  K  V  H  P  H  Q  V  G  R  N  G  D  H  A  N  D  L  V  D  D  L  L  E  K  Q  Q  P  P  V  T  D  S  A  N  L  D  T  T  :  V  L  E  S  V  Q  E  S  T  V  V  I  C  K  P  S  S  E  T  I  F  S  P  S  V  E  P  V  S   : A  N  N  D  F  Y  V  P  Q  L  E  T  E  D  S  D  S  S  R  S  S  C  E  H  Q  T  C  N  V  S  D  F  Y  I  S  D  M  I  V  S  C  L  A  V  E  G  E  T  I  Y  D  N  S  L  T  D  R  F  L  A  D  Y  K  C  E  E  P  N  I  F  N  N  V  D  E  E  Y  L  L  L  P  F  L  E  D  T  A  A  A  S  Y  S  Q  V  C  R  T  S  S  E  E  T  A  V  Q  S  D  D  S  S  L  Y  M  A  I  H  Q  L  R  S  S  E  Q  S  D  A  F  T  Y  L  E  S  D  Q  A  E  C  F  D  P  H  I  F  I  R  N  L  P  D  I  L  E  R  P  S  I  L  P  N  E  S  E  T  C  K  P  I  T  L  V  L  D  L  D   : E  T  L  V  H  S  T  L  E  H  C  D  D  A  D  F  T  F  P  V  F  F  S  M  K  E  H  I  V  Y  V  K  Q  R  P  H  L  Q  T  F  L  E  R  V  A  E  M  F  D  I  V  I  F  T  A  S  Q  S  I  Y  A  K  Q  L  L  D  I  L  D  P  D  G  K  I  I  S  R  R  A  Y  R  E  S  C  I  F  S  D  G  S  Y  T  K  D  L  T  V  L  G  V  D  L  A  K  V  V  I  V  D  N  S  P  Q  :  V  F  R  L  Q  V  N  N  G  I  P  I  K  S  W  F  D  D  P  S  D  S  A  L  I  S  L  L  P  F  L  E  T  L  A  D  A  D  D  V  R  P  I  I  A  K  K  F  G  N  K  E  *  E  A  L  V  S  S  *  *  F  L  *  H  L  L  S  S  H  L  N  K  F  I  L  H  L  H  A  H  C  S  I  L  I  E  P  *  Y  N  W  G  V  Q  *  K  Y  *  S  F  S  G  *  V  S  F  F  V  R  S  P  F  L  V  S  T  L  L  T  T  F  F  S  P  L  L  T  N  L  F  Q  I  *  L  Q  E  V  L  L  V  C  T  V  Q  L  Y  L  P  S  Y  L  Q  A  C  V  Y  G  L  I  Y  C  E  I  N  R  D  F  V  F   : L  T  Q </first_frame>
            <second_frame>  S  R  E  R  K  *  E  R  R  L  V  T  L  P   : V  S  C  G  *  Y  Y  I  C  L  K  G  F  *  I  P  T  D  A  F  R  S  R  L  C  Y  T  F  Q  V  R  I  K  C  H  L  *  E  *  R  Q  S  *  P  H  P  V  R  K  K  K  M  V  S  M  S  V  Q  I  L  V  S  Y  P  R  V  L  S  L  E  P  E  V  C  R  M  Q  T  K  L  Q  I  *  F  T  I  L  M  M  :  F  L  A  T  T  K  F  I  H  T  K  S  E  E  M  V  I  M  L  M  I  W  *  M  T  F  L  K  S  N  S  H  L  L  L  I  L  Q  T  L  I  P  R :   F  W  N  R  C  R  S  L  Q  *  *  S  A  N  Q  V  Q  R  Q  S  F  H  L  V  W  S  L  L  V  :  Q  T  M  I  F  M  Y  P  N  W  R  L  K  I  V  I  A  A  E  V  R  V  N  I  R  R  A  M  F  Q  I  S  T  S  L  I  *  L  F  L  V  W  L  L  R  V  K  P  S  M  I  T  V  *  L  T  G  S  W  L  I  T  S  V  K  N  Q  I  F  L  I  M  L  M  R  N  T  C  C  C  L  S  L  K  T  L  Q  Q  L  A  I  V  K  C  A  E  R  L  V  K  K  L  L  F  S  L  M  I  R  A  Y  T  W  Q  F  T  S  L  D  H  L  N  N  L  M  L  S  H  I  *  N  L  I  K  Q  N  A  L  T  H  I  Y  S  *  E  I  C  Q  T  Y  *  R  G  Q  V  F  C  Q  T  N  Q  K  H  A  N  R  S  P  *  Y  L  T  *  M  :  K  H  L  F  I  L  H  W  S  T  V  T  M  Q  T  S  H  F  L  F  S  S  A  *  K  N  T  L  S  M  *  N  S  G  L  T  S  R  H  S  W  R  E  L  Q  R  C  L  T  L  *  F  L  L  L  V  R  A  Y  M  R  S  N  C  W  I  F  W  I  Q  M  E  R  L  S  Q  G  E  H  I  V  N  H  A  S  S  L  M  E  V  I  Q  R  I  *  R  Y  *  V  L  I  W  Q  K  L  S  L  *  I  I  P  H  R :   F  S  D  C  K  *  I  M  G  F  L  L  R  V  G  L  M  I  L  Q  T  L  H  *  F  L  Y  F  H  S  *  R  H  W  L  M  L  M  M  S  D  L  L  L  L  R  N  S  V  T  R  N  K  R  P  L  F  L  P  S  S  S  S  N  T  S  S  L  L  I  *  T  N  L  S  F  I  Y  M  L  I  V  L  S  S  L  S  L  D  I  I  G  V  C  N  K  N  T  S  P  F  L  V  E  S  V  F  L  C  A  V  L  F  L  F  P  P  C  *  Q  L  S  S  V  H  C  L  L  I  C  F  K  Y  S  C  K  K  F  S  L  C  A  L  Y  S  Y  I  C  L  V  I  Y  K  L  V  Y  M  D  *  S  I  V  K  *  I  V  I  S  C  F  :  *  H   </second_frame>
            <third_frame>   L  E  R  E  S  E  R  D  A  W  *  L  Y  Q  :  S  L  V  A  D  T  I  S  A  *  R  G  F  E  S  L  L  M  L  S  D  Q  D  C  A  T  H  S  K  Y  E  S  N  A  I  S  K  N  E  D  K  A  S  H  I  Q  F  E  R  K  K  W  S  P  C  L  S  K  F  *  C  H  I  Q  E  F  S  L  S  N  Q  K  C  A  E  C  R  R  S  C  R  S  D  S  Q  Y  S  *  C :   S  *  L  L  Q  S  S  S  T  P  S  R  K  K  W  *  S  C  *  *  F  G  R  *  P  S  *  K  A  T  A  T  C  Y  *  F  C  K  P  *  Y  H   : G  F  G  I  G  A  G  V  Y  S  S  D  L  Q  T  K  F  R  D  N  L  F  T  *  C  G  A  C  *  C :   K  Q  *  F  L  C  T  P  I  G  D  *  R  *  *  *  Q  Q  K  F  V  *  T  S  D  V  Q  C  F  R  F  L  H  L  *  Y  D  C  F  L  F  G  C  *  G  *  N  H  L  *  *  Q  F  D  *  Q  V  L  G  *  L  Q  V  *  R  T  K  Y  F  *  *  C  *  *  G  I  L  A  V  A  F  P  *  R  H  C  S  S  *  L  *  S  S  V  Q  N  V  *  *  R  N  C  C  S  V  *  *  F  E  L  I  H  G  N  S  P  A  *  I  I  *  T  I  *  C  F  H  I  F  R  I  *  S  S  R  M  L  *  P  T  Y  I  H  K  K  F  A  R  H  I  R  E  A  K  Y  F  A  K  R  I  R  N  M  Q  T  D  H  P  S  T  *  P  R  * :   N  T  C  S  F  Y  T  G  A  L  *  R  C  R  L  H  I  S  C  F  L  Q  H  E  R  T  H  C  L  C  E  T  A  A  S  P  P  D  I  L  G  E  S  C  R  D  V  *  H  C  N  F  Y  C  *  S  E  H  I  C  E  A  I  V  G  Y  S  G  S  R  W  K  D  Y  L  K  A  S  I  S  *  I  M  H  L  L  *  W  K  L  Y  K  G  F  N  G  I  R  C  *  S  G  K  S  C  H  C  R  *  F  P  T   : G  F  Q  I  A  S  E  *  W  D  S  Y  *  E  L  V  *  *  S  F  R  L  C  T  N  F  F  T  S  I  P  R  D  T  G  *  C  *  *  C  P  T  Y  Y  C  *  E  I  R  *  Q  G  I  R  G  P  C  F  F  L  V  V  P  L  T  P  P  L  F  S  F  K  Q  I  Y  P  S  F  T  C  S  L  F  Y  P  H  *  A  L  I  *  L  G  C  A  I  K  I  L  V  L  F  W  L  S  Q  F  F  C  A  Q  S  F  S  C  F  H  P  V  D  N  F  L  Q  S  I  A  Y  *  F  V  S  N  I  V  A  R  S  S  P  C  V  H  C  T  V  I  F  A  *  L  F  T  S  L  C  I  W  I  D  L  L  *  N  K  S  *  F  R  V  S :   N  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="51166" stop="51379"/>
                    <exon start="51567" stop="51694"/>
                    <exon start="53685" stop="53772"/>
                    <exon start="54090" stop="54611"/>
                    <exon start="54867" stop="55204"/>
                    <exon start="55881" stop="56039"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1446</number_coding_nucleotides>
                  <number_encoded_amino_acids>482</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CFQIKIVLHIPSTNQMPSLRMKTKLATSSSKEKNGLHVCPNSSVISKSSLSRTRSVQNADEVADLIHNTHDVPSYYKVHPHQVGRNGDHANDLVDDLLEKQQPPVTDSANLDTTVLESVQESTVVICKPSSETIFSPSVEPVSANNDFYVPQLETEDSDSSRSSCEHQTCNVSDFYISDMIVSCLAVEGETIYDNSLTDRFLADYKCEEPNIFNNVDEEYLLLPFLEDTAAASYSQVCRTSSEETAVQSDDSSLYMAIHQLRSSEQSDAFTYLESDQAECFDPHIFIRNLPDILERPSILPNESETCKPITLVLDLDETLVHSTLEHCDDADFTFPVFFSMKEHIVYVKQRPHLQTFLERVAEMFDIVIFTASQSIYAKQLLDILDPDGKIISRRAYRESCIFSDGSYTKDLTVLGVDLAKVVIVDNSPQVFRLQVNNGIPIKSWFDDPSDSALISLLPFLETLADADDVRPIIAKKFGNKE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="58282" PGL_stop="58663"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="58282" e_stop="58663"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="58282" e_stop="58663" e_length="382"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58282" stop="58555"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240379" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58384" stop="58663"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242249" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATCATTGTGGGGGTCAGTGTGTAGTTCCGATAATTTGTTTGTTAGGTATATAATTGCAGGATGTTCCTTGGTATACCTGCTTCCCATCCTTCTAGTATTCTCGCCCATTCAAATCATGATATTATTGACTTTCTTTTCGATCAAAATGATTTCATAACCACACACAAAAAAAAGCCTCTTCCCTTTGAACATGATGCTTGATATTGACATGAGGGTTCTATTTCCCGGTATTGAATAGTTTAGGCAATTAAATTCTGCAAGAATGGATGTTTTCTAGGTGGTGATAAGGTGGTAGGGGAAGCTGCAAACGCTAGATAATGTCTATGGTGATGTAGAGGTTGGGACTAGACTACCAATTGGATGTTTCCCAGTCGAACCCTCT</gDNA_template>
            <first_frame> I  I  V  G  V  S  V  *  F  R  *  F  V  C  *  V  Y  N  C  R  M  F  L  G  I  P  A  S  H  P  S  S  I  L  A  H  S  N  H  D  I  I  D  F  L  F  D  Q  N  D  F  I  T  T  H  K  K  K  P  L  P  F  E  H  D  A  *  Y  *  H  E  G  S  I  S  R  Y  *  I  V  *  A  I  K  F  C  K  N  G  C  F  L  G  G  D  K  V  V  G  E  A  A  N  A  R  *  C  L  W  *  C  R  G  W  D  *  T  T  N  W  M  F  P  S  R  T  L  </first_frame>
            <second_frame>  S  L  W  G  S  V  C  S  S  D  N  L  F  V  R  Y  I  I  A  G  C  S  L  V  Y  L  L  P  I  L  L  V  F  S  P  I  Q  I  M  I  L  L  T  F  F  S  I  K  M  I  S  *  P  H  T  K  K  S  L  F  P  L  N  M  M  L  D  I  D  M  R  V  L  F  P  G  I  E  *  F  R  Q  L  N  S  A  R  M  D  V  F  *  V  V  I  R  W  *  G  K  L  Q  T  L  D  N  V  Y  G  D  V  E  V  G  T  R  L  P  I  G  C  F  P  V  E  P  S </second_frame>
            <third_frame>   H  C  G  G  Q  C  V  V  P  I  I  C  L  L  G  I  *  L  Q  D  V  P  W  Y  T  C  F  P  S  F  *  Y  S  R  P  F  K  S  *  Y  Y  *  L  S  F  R  S  K  *  F  H  N  H  T  Q  K  K  A  S  S  L  *  T  *  C  L  I  L  T  *  G  F  Y  F  P  V  L  N  S  L  G  N  *  I  L  Q  E  W  M  F  S  R  W  *  *  G  G  R  G  S  C  K  R  *  I  M  S  M  V  M  *  R  L  G  L  D  Y  Q  L  D  V  S  Q  S  N  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0066C13.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="88920" PGL_stop="89761"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88920" e_stop="89196"/>
            <exon e_start="89280" e_stop="89761"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.989" e_score="0.931"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.931">
            <gDNA_exon_boundary e_start="88920" e_stop="89196" e_length="277"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.989">
            <gDNA_intron_boundary i_start="89197" i_stop="89279" i_length="83"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="89280" e_stop="89761" e_length="482"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88920" stop="89196"/>
              <exon start="89280" stop="89616"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390414" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88920" stop="89196"/>
              <exon start="89280" stop="89615"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390415" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88921" stop="89196"/>
              <exon start="89280" stop="89533"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235500" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88949" stop="89196"/>
              <exon start="89280" stop="89561"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243647" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88949" stop="89196"/>
              <exon start="89280" stop="89508"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242890" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88949" stop="89196"/>
              <exon start="89280" stop="89487"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242218" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89087" stop="89196"/>
              <exon start="89280" stop="89761"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206025" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAAATCCTTAAGATTCTGATTTGATATCTTCATTCGTATCTCTCTTTCTCTTCTGTCAAATATTTTCCGTATCTTCTCGAAATCAACATCACATCCCCCATATATATATAATTCACTTCACAAACTCACAAATTCATAAAAACAAATACAAATTCATAAAAAGAAATTCTTCTTACAATCAAACAATGGATACTCAATTTCATGTTTTAGCTGTTGATGACAGTATTATTGATAGAAAACTCATTGAAAGACTTCTCAAAACTTCATCTTATCAAG : TTACTGTTGTTGATTCTGGAAGTAAAGCTTTGGAGTTGCTTGAAGTAAGAGAAACGGGAGTGAATTTGATAATTACAGATTATAGTATGCCGGAAATGACTGGTTATGATTTATTGAGGAAAGTTAAAGGATCATCTTATTTGAAGGATATTCCAGTTATAATTATGTCATCGGAAAATGTTCCATCAAGGATTAATAGATGTTTAGAAGAAGGAGCTGAAGAGTTTTTTCTGAAGCCAGTTCAACAATCAGATGTTAACAGAATTAAGCCTCATTTAATGAGGGAGAAACCTAATTCTCTAAAGAGAAAAGCTATGGTTGAATGCATTTCACCTGACAGAACCAGAAAATACAGCAGCAACAACAACAACAGTTTATGTAGCATCTTTTTGCAGAACATTTGTGAGTGAAGGGGAAATTGTTTCAGAGAAACATATTCAGTGTAATCTCTCGCTCGCAATTGAGATCTCAGATCTGAGATC</gDNA_template>
            <first_frame> E  N  P  *  D  S  D  L  I  S  S  F  V  S  L  F  L  F  C  Q  I  F  S  V  S  S  R  N  Q  H  H  I  P  H  I  Y  I  I  H  F  T  N  S  Q  I  H  K  N  K  Y  K  F  I  K  R  N  S  S  Y  N  Q  T  M  D  T  Q  F  H  V  L  A  V  D  D  S  I  I  D  R  K  L  I  E  R  L  L  K  T  S  S  Y  Q   : V  T  V  V  D  S  G  S  K  A  L  E  L  L  E  V  R  E  T  G  V  N  L  I  I  T  D  Y  S  M  P  E  M  T  G  Y  D  L  L  R  K  V  K  G  S  S  Y  L  K  D  I  P  V  I  I  M  S  S  E  N  V  P  S  R  I  N  R  C  L  E  E  G  A  E  E  F  F  L  K  P  V  Q  Q  S  D  V  N  R  I  K  P  H  L  M  R  E  K  P  N  S  L  K  R  K  A  M  V  E  C  I  S  P  D  R  T  R  K  Y  S  S  N  N  N  N  S  L  C  S  I  F  L  Q  N  I  C  E  *  R  G  N  C  F  R  E  T  Y  S  V  *  S  L  A  R  N  *  D  L  R  S  E  I </first_frame>
            <second_frame>  K  I  L  K  I  L  I  *  Y  L  H  S  Y  L  S  F  S  S  V  K  Y  F  P  Y  L  L  E  I  N  I  T  S  P  I  Y  I  *  F  T  S  Q  T  H  K  F  I  K  T  N  T  N  S  *  K  E  I  L  L  T  I  K  Q  W  I  L  N  F  M  F  *  L  L  M  T  V  L  L  I  E  N  S  L  K  D  F  S  K  L  H  L  I  K  :  L  L  L  L  I  L  E  V  K  L  W  S  C  L  K  *  E  K  R  E  *  I  *  *  L  Q  I  I  V  C  R  K  *  L  V  M  I  Y  *  G  K  L  K  D  H  L  I  *  R  I  F  Q  L  *  L  C  H  R  K  M  F  H  Q  G  L  I  D  V  *  K  K  E  L  K  S  F  F  *  S  Q  F  N  N  Q  M  L  T  E  L  S  L  I  *  *  G  R  N  L  I  L  *  R  E  K  L  W  L  N  A  F  H  L  T  E  P  E  N  T  A  A  T  T  T  T  V  Y  V  A  S  F  C  R  T  F  V  S  E  G  E  I  V  S  E  K  H  I  Q  C  N  L  S  L  A  I  E  I  S  D  L  R   </second_frame>
            <third_frame>   K  S  L  R  F  *  F  D  I  F  I  R  I  S  L  S  L  L  S  N  I  F  R  I  F  S  K  S  T  S  H  P  P  Y  I  Y  N  S  L  H  K  L  T  N  S  *  K  Q  I  Q  I  H  K  K  K  F  F  L  Q  S  N  N  G  Y  S  I  S  C  F  S  C  *  *  Q  Y  Y  *  *  K  T  H  *  K  T  S  Q  N  F  I  L  S  S :   Y  C  C  *  F  W  K  *  S  F  G  V  A  *  S  K  R  N  G  S  E  F  D  N  Y  R  L  *  Y  A  G  N  D  W  L  *  F  I  E  E  S  *  R  I  I  L  F  E  G  Y  S  S  Y  N  Y  V  I  G  K  C  S  I  K  D  *  *  M  F  R  R  R  S  *  R  V  F  S  E  A  S  S  T  I  R  C  *  Q  N  *  A  S  F  N  E  G  E  T  *  F  S  K  E  K  S  Y  G  *  M  H  F  T  *  Q  N  Q  K  I  Q  Q  Q  Q  Q  Q  Q  F  M  *  H  L  F  A  E  H  L  *  V  K  G  K  L  F  Q  R  N  I  F  S  V  I  S  R  S  Q  L  R  S  Q  I  *  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88932" stop="89196"/>
                    <exon start="89280" stop="89689"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>672</number_coding_nucleotides>
                  <number_encoded_amino_acids>224</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DSDLISSFVSLFLFCQIFSVSSRNQHHIPHIYIIHFTNSQIHKNKYKFIKRNSSYNQTMDTQFHVLAVDDSIIDRKLIERLLKTSSYQVTVVDSGSKALELLEVRETGVNLIITDYSMPEMTGYDLLRKVKGSSYLKDIPVIIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVNRIKPHLMREKPNSLKRKAMVECISPDRTRKYSSNNNNSLCSIFLQNICE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="88944" e_stop="88955"/>
            <exon e_start="89088" e_stop="89196"/>
            <exon e_start="89280" e_stop="89575"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.810" acc_prob="0.000" e_score="0.667"/>
          <exon-intron don_prob="0.998" acc_prob="0.989" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.667">
            <gDNA_exon_boundary e_start="88944" e_stop="88955" e_length="12"/>
          </exon>
          <intron i_serial="1" don_prob="0.810" acc_prob="0.000">
            <gDNA_intron_boundary i_start="88956" i_stop="89087" i_length="132"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="89088" e_stop="89196" e_length="109"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.989">
            <gDNA_intron_boundary i_start="89197" i_stop="89279" i_length="83"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="89280" e_stop="89575" e_length="296"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88944" stop="88955"/>
              <exon start="89088" stop="89196"/>
              <exon start="89280" stop="89575"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200229" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATATCTTCATTC : TCTTCTTACAATCAAACAATGGATACTCAATTTCATGTTTTAGCTGTTGATGACAGTATTATTGATAGAAAACTCATTGAAAGACTTCTCAAAACTTCATCTTATCAAG : TTACTGTTGTTGATTCTGGAAGTAAAGCTTTGGAGTTGCTTGAAGTAAGAGAAACGGGAGTGAATTTGATAATTACAGATTATAGTATGCCGGAAATGACTGGTTATGATTTATTGAGGAAAGTTAAAGGATCATCTTATTTGAAGGATATTCCAGTTATAATTATGTCATCGGAAAATGTTCCATCAAGGATTAATAGATGTTTAGAAGAAGGAGCTGAAGAGTTTTTTCTGAAGCCAGTTCAACAATCAGATGTTAACAGAATTAAGCCTCATTTAATGAGGGAGAAACCTAAT</gDNA_template>
            <first_frame> I  S  S  F  :  S  S  Y  N  Q  T  M  D  T  Q  F  H  V  L  A  V  D  D  S  I  I  D  R  K  L  I  E  R  L  L  K  T  S  S  Y  Q   : V  T  V  V  D  S  G  S  K  A  L  E  L  L  E  V  R  E  T  G  V  N  L  I  I  T  D  Y  S  M  P  E  M  T  G  Y  D  L  L  R  K  V  K  G  S  S  Y  L  K  D  I  P  V  I  I  M  S  S  E  N  V  P  S  R  I  N  R  C  L  E  E  G  A  E  E  F  F  L  K  P  V  Q  Q  S  D  V  N  R  I  K  P  H  L  M  R  E  K  P  N </first_frame>
            <second_frame>  Y  L  H  S :   L  L  T  I  K  Q  W  I  L  N  F  M  F  *  L  L  M  T  V  L  L  I  E  N  S  L  K  D  F  S  K  L  H  L  I  K  :  L  L  L  L  I  L  E  V  K  L  W  S  C  L  K  *  E  K  R  E  *  I  *  *  L  Q  I  I  V  C  R  K  *  L  V  M  I  Y  *  G  K  L  K  D  H  L  I  *  R  I  F  Q  L  *  L  C  H  R  K  M  F  H  Q  G  L  I  D  V  *  K  K  E  L  K  S  F  F  *  S  Q  F  N  N  Q  M  L  T  E  L  S  L  I  *  *  G  R  N  L   </second_frame>
            <third_frame>   I  F  I   : L  F  L  Q  S  N  N  G  Y  S  I  S  C  F  S  C  *  *  Q  Y  Y  *  *  K  T  H  *  K  T  S  Q  N  F  I  L  S  S :   Y  C  C  *  F  W  K  *  S  F  G  V  A  *  S  K  R  N  G  S  E  F  D  N  Y  R  L  *  Y  A  G  N  D  W  L  *  F  I  E  E  S  *  R  I  I  L  F  E  G  Y  S  S  Y  N  Y  V  I  G  K  C  S  I  K  D  *  *  M  F  R  R  R  S  *  R  V  F  S  E  A  S  S  T  I  R  C  *  Q  N  *  A  S  F  N  E  G  E  T  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="+"/>
                <serials PGL_serial="8" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88944" stop="88955"/>
                    <exon start="89088" stop="89196"/>
                    <exon start="89280" stop="89575"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>417</number_coding_nucleotides>
                  <number_encoded_amino_acids>139</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISSFSSYNQTMDTQFHVLAVDDSIIDRKLIERLLKTSSYQVTVVDSGSKALELLEVRETGVNLIITDYSMPEMTGYDLLRKVKGSSYLKDIPVIIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVNRIKPHLMREKPN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="92208" PGL_stop="96489"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="92208" e_stop="92580"/>
            <exon e_start="92722" e_stop="92835"/>
            <exon e_start="95202" e_stop="95297"/>
            <exon e_start="95390" e_stop="95454"/>
            <exon e_start="95983" e_stop="96052"/>
            <exon e_start="96130" e_stop="96286"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.898" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.201" acc_prob="0.942" e_score="1.000"/>
          <exon-intron don_prob="0.902" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.910" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.949" acc_prob="0.971" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="92208" e_stop="92580" e_length="373"/>
          </exon>
          <intron i_serial="1" don_prob="0.898" acc_prob="0.999">
            <gDNA_intron_boundary i_start="92581" i_stop="92721" i_length="141"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92722" e_stop="92835" e_length="114"/>
          </exon>
          <intron i_serial="2" don_prob="0.201" acc_prob="0.942">
            <gDNA_intron_boundary i_start="92836" i_stop="95201" i_length="2366"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="95202" e_stop="95297" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.902" acc_prob="0.000">
            <gDNA_intron_boundary i_start="95298" i_stop="95389" i_length="92"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="95390" e_stop="95454" e_length="65"/>
          </exon>
          <intron i_serial="4" don_prob="0.910" acc_prob="0.998">
            <gDNA_intron_boundary i_start="95455" i_stop="95982" i_length="528"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="95983" e_stop="96052" e_length="70"/>
          </exon>
          <intron i_serial="5" don_prob="0.949" acc_prob="0.971">
            <gDNA_intron_boundary i_start="96053" i_stop="96129" i_length="77"/>
          </intron>
          <exon e_serial="6" e_score="0.981">
            <gDNA_exon_boundary e_start="96130" e_stop="96286" e_length="157"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92208" stop="92580"/>
              <exon start="92722" stop="92835"/>
              <exon start="95202" stop="95297"/>
              <exon start="95390" stop="95454"/>
              <exon start="95983" stop="96052"/>
              <exon start="96130" stop="96286"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703460" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92288" stop="92580"/>
              <exon start="92722" stop="92835"/>
              <exon start="95202" stop="95278"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206974" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92323" stop="92580"/>
              <exon start="92722" stop="92835"/>
              <exon start="95202" stop="95247"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391647" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92324" stop="92580"/>
              <exon start="92722" stop="92835"/>
              <exon start="95202" stop="95297"/>
              <exon start="95390" stop="95454"/>
              <exon start="95983" stop="96041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246672" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92360" stop="92580"/>
              <exon start="92722" stop="92835"/>
              <exon start="95202" stop="95297"/>
              <exon start="95390" stop="95454"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299358" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTGTTGTCGCTCTTCGTTCGACAAATGGCACACTATTTCTTGTACGTATGAATCAACCCTTCACTTTATACTGTCACTTCTCACTCTCCTTCTTCACCATTATTGTCTTTAACTCTGATTTCTCAGGCGACCCATCTCTGATTTCCACTTTCTTTATCTTCATTCGCCGGCGTATAAGTTAAACAGTAGAGGAATTTTAAAACAAAGATATAGAATGATGTCCCTTTCTCTTTCTCTTTCTTATCCTATACATCGTTTTGCTTCCTACAATAAACAACTATGCGCTTTGAGATCTCCTCAATCTCATCACACTAGGATTTCTCAGCACAAATTGCAGCAAAGCTCTAGTTTTCTTGGATATAACCCTCTCAG : AGTTTCAATTGATGTAAGTGGAGAGATGAATATGAAGAGACGTGGAGGAGTGGTTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGT : GGTTCTCATGCTTGCGAAGGGCACTGCTATTCACAAGTCTTTTCTTGTTCCTTTATTTGCTTTACAAGCTCCTACTGCAGTTGTCTCGTGGATCCA : GGGTGAATATGGCATTTGGTCAGCATTTTTGGCACTTCTTGTTCGTCTCTTCTTCTCCTTTCCTG : GTGAACTTGAATTGCCATTTATAGCATTATTGATGGTAATTGTGGCTCCTTATCAAGTTGCAAATCTAAG : GGGGACAAAGGAAGGTGTCATTCTTTCCTTGGCTATAGCAGCTTATCTGGGTTTCCAGCATTTCACACGTGCTGGCAGCTTGCAGAAGGCGTTTGATCAAGGTTCAATTATTGCCACCCTAGCCATCATTTGTATTCTTGCTGTGCCATGCTTGCTC</gDNA_template>
            <first_frame> I  V  V  A  L  R  S  T  N  G  T  L  F  L  V  R  M  N  Q  P  F  T  L  Y  C  H  F  S  L  S  F  F  T  I  I  V  F  N  S  D  F  S  G  D  P  S  L  I  S  T  F  F  I  F  I  R  R  R  I  S  *  T  V  E  E  F  *  N  K  D  I  E  *  C  P  F  L  F  L  F  L  I  L  Y  I  V  L  L  P  T  I  N  N  Y  A  L  *  D  L  L  N  L  I  T  L  G  F  L  S  T  N  C  S  K  A  L  V  F  L  D  I  T  L  S   : E  F  Q  L  M  *  V  E  R  *  I  *  R  D  V  E  E  W  F  V  L  L  L  L  L  L  L  E  I  Y  S  G  S  V  L  F  P  L   : W  F  S  C  L  R  R  A  L  L  F  T  S  L  F  L  F  L  Y  L  L  Y  K  L  L  L  Q  L  S  R  G  S   : R  V  N  M  A  F  G  Q  H  F  W  H  F  L  F  V  S  S  S  P  F  L  :  V  N  L  N  C  H  L  *  H  Y  *  W  *  L  W  L  L  I  K  L  Q  I  *   : G  G  Q  R  K  V  S  F  F  P  W  L  *  Q  L  I  W  V  S  S  I  S  H  V  L  A  A  C  R  R  R  L  I  K  V  Q  L  L  P  P  *  P  S  F  V  F  L  L  C  H  A  C   </first_frame>
            <second_frame>  L  L  S  L  F  V  R  Q  M  A  H  Y  F  L  Y  V  *  I  N  P  S  L  Y  T  V  T  S  H  S  P  S  S  P  L  L  S  L  T  L  I  S  Q  A  T  H  L  *  F  P  L  S  L  S  S  F  A  G  V  *  V  K  Q  *  R  N  F  K  T  K  I  *  N  D  V  P  F  S  F  S  F  L  S  Y  T  S  F  C  F  L  Q  *  T  T  M  R  F  E  I  S  S  I  S  S  H  *  D  F  S  A  Q  I  A  A  K  L  *  F  S  W  I  *  P  S  Q  :  S  F  N  *  C  K  W  R  D  E  Y  E  E  T  W  R  S  G  L  F  C  C  C  S  Y  S  *  K  S  T  V  G  L  Y  Y  F  L  C  :  G  S  H  A  C  E  G  H  C  Y  S  Q  V  F  S  C  S  F  I  C  F  T  S  S  Y  C  S  C  L  V  D  P  :  G  *  I  W  H  L  V  S  I  F  G  T  S  C  S  S  L  L  L  L  S  W :   *  T  *  I  A  I  Y  S  I  I  D  G  N  C  G  S  L  S  S  C  K  S  K  :  G  D  K  G  R  C  H  S  F  L  G  Y  S  S  L  S  G  F  P  A  F  H  T  C  W  Q  L  A  E  G  V  *  S  R  F  N  Y  C  H  P  S  H  H  L  Y  S  C  C  A  M  L  A  </second_frame>
            <third_frame>   C  C  R  S  S  F  D  K  W  H  T  I  S  C  T  Y  E  S  T  L  H  F  I  L  S  L  L  T  L  L  L  H  H  Y  C  L  *  L  *  F  L  R  R  P  I  S  D  F  H  F  L  Y  L  H  S  P  A  Y  K  L  N  S  R  G  I  L  K  Q  R  Y  R  M  M  S  L  S  L  S  L  S  Y  P  I  H  R  F  A  S  Y  N  K  Q  L  C  A  L  R  S  P  Q  S  H  H  T  R  I  S  Q  H  K  L  Q  Q  S  S  S  F  L  G  Y  N  P  L  R :   V  S  I  D  V  S  G  E  M  N  M  K  R  R  G  G  V  V  C  S  A  A  A  L  T  P  R  N  L  Q  W  V  C  T  I  S  S  V :   V  L  M  L  A  K  G  T  A  I  H  K  S  F  L  V  P  L  F  A  L  Q  A  P  T  A  V  V  S  W  I  Q :   G  E  Y  G  I  W  S  A  F  L  A  L  L  V  R  L  F  F  S  F  P   : G  E  L  E  L  P  F  I  A  L  L  M  V  I  V  A  P  Y  Q  V  A  N  L  R :   G  T  K  E  G  V  I  L  S  L  A  I  A  A  Y  L  G  F  Q  H  F  T  R  A  G  S  L  Q  K  A  F  D  Q  G  S  I  I  A  T  L  A  I  I  C  I  L  A  V  P  C  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92327" stop="92580"/>
                    <exon start="92722" stop="92835"/>
                    <exon start="95202" stop="95297"/>
                    <exon start="95390" stop="95454"/>
                    <exon start="95983" stop="96052"/>
                    <exon start="96130" stop="96286"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>756</number_coding_nucleotides>
                  <number_encoded_amino_acids>252</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLRRPISDFHFLYLHSPAYKLNSRGILKQRYRMMSLSLSLSYPIHRFASYNKQLCALRSPQSHHTRISQHKLQQSSSFLGYNPLRVSIDVSGEMNMKRRGGVVCSAAALTPRNLQWVCTISSVVLMLAKGTAIHKSFLVPLFALQAPTAVVSWIQGEYGIWSAFLALLVRLFFSFPGELELPFIALLMVIVAPYQVANLRGTKEGVILSLAIAAYLGFQHFTRAGSLQKAFDQGSIIATLAIICILAVPCLL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="92775" e_stop="92835"/>
            <exon e_start="94591" e_stop="95163"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.201" acc_prob="0.933" e_score="1.000"/>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="92775" e_stop="92835" e_length="61"/>
          </exon>
          <intron i_serial="1" don_prob="0.201" acc_prob="0.933">
            <gDNA_intron_boundary i_start="92836" i_stop="94590" i_length="1755"/>
          </intron>
          <exon e_serial="2" e_score="0.984">
            <gDNA_exon_boundary e_start="94591" e_stop="95163" e_length="573"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92775" stop="92835"/>
              <exon start="94591" stop="94845"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395868" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92776" stop="92835"/>
              <exon start="94591" stop="95163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374993" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92776" stop="92835"/>
              <exon start="94591" stop="95076"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231735" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92776" stop="92835"/>
              <exon start="94591" stop="94959"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231697" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92776" stop="92835"/>
              <exon start="94591" stop="94778"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236567" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGT : GATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATTTAGAAGCATCAACCAGGAGAGAGCATTGGCCCTTGCCATTGACACATTAGCTTTGTGTGCTTCACACTCTATCGTTAAGGCTTGAGTTAACCCAACACTGTACAGATAGAAAAGATAAAAAGAGAGGGACATGTGCAGAAGTCTTTCTTTATAGATTGTACACTTGTTCCTGTCACGTAACATTAGTCAATAATATTTTTAGAGATTTACTGTTTGCTTTCTCTTTTTTCTCGAGTATGACTGCACATTAATTTCTTTGGTACAAGTGTATTGAATCTTAGAAGATTCAAAGTCAGTGCCCCTTGTTTTATAAGTCTTGTATAATTTCCGGCGAATAAACTATCTTTTTTTCTTTTAAAGTAAACCTTGTTCTGCATGCTGTGCCATGATT</gDNA_template>
            <first_frame> F  V  L  L  L  L  L  L  L  E  I  Y  S  G  S  V  L  F  P  L   : *  C  G  Q  T  I  S  F  D  F  L  P  F  Y  P  R  V  Q  L  G  L  P  K  F  P  D  Y  L  M  I  K  G  H  L  Q  A  N  V  Q  A  *  S  *  R  A  K  V  Y  K  E  N  S  L  L  V  A  P  L  V  R  I  *  K  H  Q  P  G  E  S  I  G  P  C  H  *  H  I  S  F  V  C  F  T  L  Y  R  *  G  L  S  *  P  N  T  V  Q  I  E  K  I  K  R  E  G  H  V  Q  K  S  F  F  I  D  C  T  L  V  P  V  T  *  H  *  S  I  I  F  L  E  I  Y  C  L  L  S  L  F  S  R  V  *  L  H  I  N  F  F  G  T  S  V  L  N  L  R  R  F  K  V  S  A  P  C  F  I  S  L  V  *  F  P  A  N  K  L  S  F  F  L  L  K  *  T  L  F  C  M  L  C  H  D  </first_frame>
            <second_frame>  L  F  C  C  C  S  Y  S  *  K  S  T  V  G  L  Y  Y  F  L  C  :  D  V  A  K  P  S  H  L  T  F  S  H  F  I  L  E  F  N  L  D  F  Q  S  F  Q  I  T  *  *  L  R  V  T  Y  R  L  M  Y  K  L  D  R  K  E  L  R  C  I  R  K  T  V  C  W  *  H  H  S  L  E  F  R  S  I  N  Q  E  R  A  L  A  L  A  I  D  T  L  A  L  C  A  S  H  S  I  V  K  A  *  V  N  P  T  L  Y  R  *  K  R  *  K  E  R  D  M  C  R  S  L  S  L  *  I  V  H  L  F  L  S  R  N  I  S  Q  *  Y  F  *  R  F  T  V  C  F  L  F  F  L  E  Y  D  C  T  L  I  S  L  V  Q  V  Y  *  I  L  E  D  S  K  S  V  P  L  V  L  *  V  L  Y  N  F  R  R  I  N  Y  L  F  F  F  *  S  K  P  C  S  A  C  C  A  M  I </second_frame>
            <third_frame>   C  S  A  A  A  L  T  P  R  N  L  Q  W  V  C  T  I  S  S  V :   M  W  P  N  H  L  I  *  L  S  P  I  L  S  S  S  S  T  W  T  S  K  V  S  R  L  L  D  D  *  G  S  L  T  G  *  C  T  S  L  I  V  K  S  *  G  V  *  G  K  Q  F  A  G  S  T  T  R  *  N  L  E  A  S  T  R  R  E  H  W  P  L  P  L  T  H  *  L  C  V  L  H  T  L  S  L  R  L  E  L  T  Q  H  C  T  D  R  K  D  K  K  R  G  T  C  A  E  V  F  L  Y  R  L  Y  T  C  S  C  H  V  T  L  V  N  N  I  F  R  D  L  L  F  A  F  S  F  F  S  S  M  T  A  H  *  F  L  W  Y  K  C  I  E  S  *  K  I  Q  S  Q  C  P  L  F  Y  K  S  C  I  I  S  G  E  *  T  I  F  F  S  F  K  V  N  L  V  L  H  A  V  P  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94823" stop="95023"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LCVLHTLSLRLELTQHCTDRKDKKRGTCAEVFLYRLYTCSCHVTLVNNIFRDLLFAFSFFSSMTAH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="92211" e_stop="92249"/>
            <exon e_start="92722" e_stop="92835"/>
            <exon e_start="95202" e_stop="95297"/>
            <exon e_start="95390" e_stop="95454"/>
            <exon e_start="95983" e_stop="96052"/>
            <exon e_start="96130" e_stop="96489"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.201" acc_prob="0.942" e_score="1.000"/>
          <exon-intron don_prob="0.902" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.910" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.949" acc_prob="0.971" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="92211" e_stop="92249" e_length="39"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="0.999">
            <gDNA_intron_boundary i_start="92250" i_stop="92721" i_length="472"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92722" e_stop="92835" e_length="114"/>
          </exon>
          <intron i_serial="2" don_prob="0.201" acc_prob="0.942">
            <gDNA_intron_boundary i_start="92836" i_stop="95201" i_length="2366"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="95202" e_stop="95297" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.902" acc_prob="0.000">
            <gDNA_intron_boundary i_start="95298" i_stop="95389" i_length="92"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="95390" e_stop="95454" e_length="65"/>
          </exon>
          <intron i_serial="4" don_prob="0.910" acc_prob="0.998">
            <gDNA_intron_boundary i_start="95455" i_stop="95982" i_length="528"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="95983" e_stop="96052" e_length="70"/>
          </exon>
          <intron i_serial="5" don_prob="0.949" acc_prob="0.971">
            <gDNA_intron_boundary i_start="96053" i_stop="96129" i_length="77"/>
          </intron>
          <exon e_serial="6" e_score="0.992">
            <gDNA_exon_boundary e_start="96130" e_stop="96489" e_length="360"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92211" stop="92249"/>
              <exon start="92722" stop="92835"/>
              <exon start="95202" stop="95297"/>
              <exon start="95390" stop="95454"/>
              <exon start="95983" stop="96052"/>
              <exon start="96130" stop="96385"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291038" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96319" stop="96489"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391881" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTGTCGCTCTTCGTTCGACAAATGGCACACTATTTCTT : AGTTTCAATTGATGTAAGTGGAGAGATGAATATGAAGAGACGTGGAGGAGTGGTTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGT : GGTTCTCATGCTTGCGAAGGGCACTGCTATTCACAAGTCTTTTCTTGTTCCTTTATTTGCTTTACAAGCTCCTACTGCAGTTGTCTCGTGGATCCA : GGGTGAATATGGCATTTGGTCAGCATTTTTGGCACTTCTTGTTCGTCTCTTCTTCTCCTTTCCTG : GTGAACTTGAATTGCCATTTATAGCATTATTGATGGTAATTGTGGCTCCTTATCAAGTTGCAAATCTAAG : GGGGACAAAGGAAGGTGTCATTCTTTCCTTGGCTATAGCAGCTTATCTGGGTTTCCAGCATTTCACACGTGCTGGCAGCTTGCAGAAGGCGTTTGATCAAGGTTCAATTATTGCCACCCTAGCCATCATTTGTATTCTTGCTGTGCCATGCTTGCTCTTGATTTGATGTTAAACTACAGCGATTTCTCAAAGGAGTCCTGTAAATTATTTGAGTCATTTGAGGGTTGGAGATCACACAAATAAATATCTTTCTTTTAATCCCTCGTGTAAATTTCTAGCTGTTTATCTAGTCAAGTTTGTGGGACAAATTAAGGTGAATGTATTTATGCAGGAATAAATAGGATAAACAAGCTTTCATTT</gDNA_template>
            <first_frame> V  V  A  L  R  S  T  N  G  T  L  F  L  :  S  F  N  *  C  K  W  R  D  E  Y  E  E  T  W  R  S  G  L  F  C  C  C  S  Y  S  *  K  S  T  V  G  L  Y  Y  F  L  C  :  G  S  H  A  C  E  G  H  C  Y  S  Q  V  F  S  C  S  F  I  C  F  T  S  S  Y  C  S  C  L  V  D  P  :  G  *  I  W  H  L  V  S  I  F  G  T  S  C  S  S  L  L  L  L  S  W :   *  T  *  I  A  I  Y  S  I  I  D  G  N  C  G  S  L  S  S  C  K  S  K  :  G  D  K  G  R  C  H  S  F  L  G  Y  S  S  L  S  G  F  P  A  F  H  T  C  W  Q  L  A  E  G  V  *  S  R  F  N  Y  C  H  P  S  H  H  L  Y  S  C  C  A  M  L  A  L  D  L  M  L  N  Y  S  D  F  S  K  E  S  C  K  L  F  E  S  F  E  G  W  R  S  H  K  *  I  S  F  F  *  S  L  V  *  I  S  S  C  L  S  S  Q  V  C  G  T  N  *  G  E  C  I  Y  A  G  I  N  R  I  N  K  L  S  F </first_frame>
            <second_frame>  L  S  L  F  V  R  Q  M  A  H  Y  F  L :   V  S  I  D  V  S  G  E  M  N  M  K  R  R  G  G  V  V  C  S  A  A  A  L  T  P  R  N  L  Q  W  V  C  T  I  S  S  V :   V  L  M  L  A  K  G  T  A  I  H  K  S  F  L  V  P  L  F  A  L  Q  A  P  T  A  V  V  S  W  I  Q :   G  E  Y  G  I  W  S  A  F  L  A  L  L  V  R  L  F  F  S  F  P   : G  E  L  E  L  P  F  I  A  L  L  M  V  I  V  A  P  Y  Q  V  A  N  L  R :   G  T  K  E  G  V  I  L  S  L  A  I  A  A  Y  L  G  F  Q  H  F  T  R  A  G  S  L  Q  K  A  F  D  Q  G  S  I  I  A  T  L  A  I  I  C  I  L  A  V  P  C  L  L  L  I  *  C  *  T  T  A  I  S  Q  R  S  P  V  N  Y  L  S  H  L  R  V  G  D  H  T  N  K  Y  L  S  F  N  P  S  C  K  F  L  A  V  Y  L  V  K  F  V  G  Q  I  K  V  N  V  F  M  Q  E  *  I  G  *  T  S  F  H   </second_frame>
            <third_frame>   C  R  S  S  F  D  K  W  H  T  I  S   : *  F  Q  L  M  *  V  E  R  *  I  *  R  D  V  E  E  W  F  V  L  L  L  L  L  L  L  E  I  Y  S  G  S  V  L  F  P  L   : W  F  S  C  L  R  R  A  L  L  F  T  S  L  F  L  F  L  Y  L  L  Y  K  L  L  L  Q  L  S  R  G  S   : R  V  N  M  A  F  G  Q  H  F  W  H  F  L  F  V  S  S  S  P  F  L  :  V  N  L  N  C  H  L  *  H  Y  *  W  *  L  W  L  L  I  K  L  Q  I  *   : G  G  Q  R  K  V  S  F  F  P  W  L  *  Q  L  I  W  V  S  S  I  S  H  V  L  A  A  C  R  R  R  L  I  K  V  Q  L  L  P  P  *  P  S  F  V  F  L  L  C  H  A  C  S  *  F  D  V  K  L  Q  R  F  L  K  G  V  L  *  I  I  *  V  I  *  G  L  E  I  T  Q  I  N  I  F  L  L  I  P  R  V  N  F  *  L  F  I  *  S  S  L  W  D  K  L  R  *  M  Y  L  C  R  N  K  *  D  K  Q  A  F  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92212" stop="92249"/>
                    <exon start="92722" stop="92835"/>
                    <exon start="95202" stop="95297"/>
                    <exon start="95390" stop="95454"/>
                    <exon start="95983" stop="96052"/>
                    <exon start="96130" stop="96295"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>546</number_coding_nucleotides>
                  <number_encoded_amino_acids>182</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSLFVRQMAHYFLVSIDVSGEMNMKRRGGVVCSAAALTPRNLQWVCTISSVVLMLAKGTAIHKSFLVPLFALQAPTAVVSWIQGEYGIWSAFLALLVRLFFSFPGELELPFIALLMVIVAPYQVANLRGTKEGVILSLAIAAYLGFQHFTRAGSLQKAFDQGSIIATLAIICILAVPCLLLI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="95197" e_stop="95297"/>
            <exon e_start="95390" e_stop="95454"/>
            <exon e_start="95983" e_stop="96052"/>
            <exon e_start="96130" e_stop="96489"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.902" acc_prob="0.000" e_score="0.970"/>
          <exon-intron don_prob="0.910" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.949" acc_prob="0.971" e_score="0.986"/>
          <exon-only e_score="0.958"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.970">
            <gDNA_exon_boundary e_start="95197" e_stop="95297" e_length="101"/>
          </exon>
          <intron i_serial="1" don_prob="0.902" acc_prob="0.000">
            <gDNA_intron_boundary i_start="95298" i_stop="95389" i_length="92"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="95390" e_stop="95454" e_length="65"/>
          </exon>
          <intron i_serial="2" don_prob="0.910" acc_prob="0.998">
            <gDNA_intron_boundary i_start="95455" i_stop="95982" i_length="528"/>
          </intron>
          <exon e_serial="3" e_score="0.986">
            <gDNA_exon_boundary e_start="95983" e_stop="96052" e_length="70"/>
          </exon>
          <intron i_serial="3" don_prob="0.949" acc_prob="0.971">
            <gDNA_intron_boundary i_start="96053" i_stop="96129" i_length="77"/>
          </intron>
          <exon e_serial="4" e_score="0.958">
            <gDNA_exon_boundary e_start="96130" e_stop="96489" e_length="360"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95197" stop="95297"/>
              <exon start="95390" stop="95454"/>
              <exon start="95983" stop="96052"/>
              <exon start="96130" stop="96489"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374992" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96319" stop="96489"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391881" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTAGGGTTCTCATGCTTGCGAAGGGCACTGCTATTCACAAGTCTTTTCTTGTTCCTTTATTTGCTTTACAAGCTCCTACTGCAGTTGTCTCGTGGATCCA : GGGTGAATATGGCATTTGGTCAGCATTTTTGGCACTTCTTGTTCGTCTCTTCTTCTCCTTTCCTG : GTGAACTTGAATTGCCATTTATAGCATTATTGATGGTAATTGTGGCTCCTTATCAAGTTGCAAATCTAAG : GGGGACAAAGGAAGGTGTCATTCTTTCCTTGGCTATAGCAGCTTATCTGGGTTTCCAGCATTTCACACGTGCTGGCAGCTTGCAGAAGGCGTTTGATCAAGGTTCAATTATTGCCACCCTAGCCATCATTTGTATTCTTGCTGTGCCATGCTTGCTCTTGATTTGATGTTAAACTACAGCGATTTCTCAAAGGAGTCCTGTAAATTATTTGAGTCATTTGAGGGTTGGAGATCACACAAATAAATATCTTTCTTTTAATCCCTCGTGTAAATTTCTAGCTGTTTATCTAGTCAAGTTTGTGGGACAAATTAAGGTGAATGTATTTATGCAGGAATAAATAGGATAAACAAGCTTTCATTT</gDNA_template>
            <first_frame> F  R  V  L  M  L  A  K  G  T  A  I  H  K  S  F  L  V  P  L  F  A  L  Q  A  P  T  A  V  V  S  W  I  Q :   G  E  Y  G  I  W  S  A  F  L  A  L  L  V  R  L  F  F  S  F  P   : G  E  L  E  L  P  F  I  A  L  L  M  V  I  V  A  P  Y  Q  V  A  N  L  R :   G  T  K  E  G  V  I  L  S  L  A  I  A  A  Y  L  G  F  Q  H  F  T  R  A  G  S  L  Q  K  A  F  D  Q  G  S  I  I  A  T  L  A  I  I  C  I  L  A  V  P  C  L  L  L  I  *  C  *  T  T  A  I  S  Q  R  S  P  V  N  Y  L  S  H  L  R  V  G  D  H  T  N  K  Y  L  S  F  N  P  S  C  K  F  L  A  V  Y  L  V  K  F  V  G  Q  I  K  V  N  V  F  M  Q  E  *  I  G  *  T  S  F  H   </first_frame>
            <second_frame>  L  G  F  S  C  L  R  R  A  L  L  F  T  S  L  F  L  F  L  Y  L  L  Y  K  L  L  L  Q  L  S  R  G  S   : R  V  N  M  A  F  G  Q  H  F  W  H  F  L  F  V  S  S  S  P  F  L  :  V  N  L  N  C  H  L  *  H  Y  *  W  *  L  W  L  L  I  K  L  Q  I  *   : G  G  Q  R  K  V  S  F  F  P  W  L  *  Q  L  I  W  V  S  S  I  S  H  V  L  A  A  C  R  R  R  L  I  K  V  Q  L  L  P  P  *  P  S  F  V  F  L  L  C  H  A  C  S  *  F  D  V  K  L  Q  R  F  L  K  G  V  L  *  I  I  *  V  I  *  G  L  E  I  T  Q  I  N  I  F  L  L  I  P  R  V  N  F  *  L  F  I  *  S  S  L  W  D  K  L  R  *  M  Y  L  C  R  N  K  *  D  K  Q  A  F  I  </second_frame>
            <third_frame>   *  G  S  H  A  C  E  G  H  C  Y  S  Q  V  F  S  C  S  F  I  C  F  T  S  S  Y  C  S  C  L  V  D  P  :  G  *  I  W  H  L  V  S  I  F  G  T  S  C  S  S  L  L  L  L  S  W :   *  T  *  I  A  I  Y  S  I  I  D  G  N  C  G  S  L  S  S  C  K  S  K  :  G  D  K  G  R  C  H  S  F  L  G  Y  S  S  L  S  G  F  P  A  F  H  T  C  W  Q  L  A  E  G  V  *  S  R  F  N  Y  C  H  P  S  H  H  L  Y  S  C  C  A  M  L  A  L  D  L  M  L  N  Y  S  D  F  S  K  E  S  C  K  L  F  E  S  F  E  G  W  R  S  H  K  *  I  S  F  F  *  S  L  V  *  I  S  S  C  L  S  S  Q  V  C  G  T  N  *  G  E  C  I  Y  A  G  I  N  R  I  N  K  L  S  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="95197" stop="95297"/>
                    <exon start="95390" stop="95454"/>
                    <exon start="95983" stop="96052"/>
                    <exon start="96130" stop="96295"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>399</number_coding_nucleotides>
                  <number_encoded_amino_acids>133</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FRVLMLAKGTAIHKSFLVPLFALQAPTAVVSWIQGEYGIWSAFLALLVRLFFSFPGELELPFIALLMVIVAPYQVANLRGTKEGVILSLAIAAYLGFQHFTRAGSLQKAFDQGSIIATLAIICILAVPCLLLI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="94042" e_stop="94765"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="94042" e_stop="94765" e_length="724"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94042" stop="94765"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345250" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="5" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACAGTTGTTACCTATTTTTCAAATCCGTTTCCCTCTTCTCAGGTGTGATACATGCTTCATTTGTGCTGTACAAAATACTTCTAGAGGAACCTTATGTTTTCAAATTAGTTGTCAAGACTCTTTCCTCTGGTTTATATATAGTAACACCCGTATAGAATAAACCCCTTTTGTGTGTCACTTACTCTTCCTTTTCAATTATCCTGTTTTCTTAGTTCAGTTGTCAGCAACAAGTTAGCCTCTCCAATTTCCAGTCTTGACTCTCCTATTGATGTTATCTCCACCTATTATTTTCTAGACAATAGGTAATTGTGCATTAGATCGTGATTTGAAACTGGATAAGTTATGACATACCTGTAATTCCTACCAAAATTTGATCTTCACACCATTTCCCAATTCAACTTAAACATGTTGCCTCTGGATTCTTCTCACTGGTTTCTAATATGCACTGATGATCATGTAGATAATATTTCCATCCATATGATTTTAGTTCTATTTGGTCTCCTTTAGCCCCTTCAATAATCTCATGATGACACATGTTGACCTGTGCAGGATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGT</gDNA_template>
            <first_frame> T  V  V  T  Y  F  S  N  P  F  P  S  S  Q  V  *  Y  M  L  H  L  C  C  T  K  Y  F  *  R  N  L  M  F  S  N  *  L  S  R  L  F  P  L  V  Y  I  *  *  H  P  Y  R  I  N  P  F  C  V  S  L  T  L  P  F  Q  L  S  C  F  L  S  S  V  V  S  N  K  L  A  S  P  I  S  S  L  D  S  P  I  D  V  I  S  T  Y  Y  F  L  D  N  R  *  L  C  I  R  S  *  F  E  T  G  *  V  M  T  Y  L  *  F  L  P  K  F  D  L  H  T  I  S  Q  F  N  L  N  M  L  P  L  D  S  S  H  W  F  L  I  C  T  D  D  H  V  D  N  I  S  I  H  M  I  L  V  L  F  G  L  L  *  P  L  Q  *  S  H  D  D  T  C  *  P  V  Q  D  V  A  K  P  S  H  L  T  F  S  H  F  I  L  E  F  N  L  D  F  Q  S  F  Q  I  T  *  *  L  R  V  T  Y  R  L  M  Y  K  L  D  R  K  E  L  R  C  I  R  K  T  V  C  W  *  H  H  S  </first_frame>
            <second_frame>  Q  L  L  P  I  F  Q  I  R  F  P  L  L  R  C  D  T  C  F  I  C  A  V  Q  N  T  S  R  G  T  L  C  F  Q  I  S  C  Q  D  S  F  L  W  F  I  Y  S  N  T  R  I  E  *  T  P  F  V  C  H  L  L  F  L  F  N  Y  P  V  F  L  V  Q  L  S  A  T  S  *  P  L  Q  F  P  V  L  T  L  L  L  M  L  S  P  P  I  I  F  *  T  I  G  N  C  A  L  D  R  D  L  K  L  D  K  L  *  H  T  C  N  S  Y  Q  N  L  I  F  T  P  F  P  N  S  T  *  T  C  C  L  W  I  L  L  T  G  F  *  Y  A  L  M  I  M  *  I  I  F  P  S  I  *  F  *  F  Y  L  V  S  F  S  P  F  N  N  L  M  M  T  H  V  D  L  C  R  M  W  P  N  H  L  I  *  L  S  P  I  L  S  S  S  S  T  W  T  S  K  V  S  R  L  L  D  D  *  G  S  L  T  G  *  C  T  S  L  I  V  K  S  *  G  V  *  G  K  Q  F  A  G  S  T  T  R </second_frame>
            <third_frame>   S  C  Y  L  F  F  K  S  V  S  L  F  S  G  V  I  H  A  S  F  V  L  Y  K  I  L  L  E  E  P  Y  V  F  K  L  V  V  K  T  L  S  S  G  L  Y  I  V  T  P  V  *  N  K  P  L  L  C  V  T  Y  S  S  F  S  I  I  L  F  S  *  F  S  C  Q  Q  Q  V  S  L  S  N  F  Q  S  *  L  S  Y  *  C  Y  L  H  L  L  F  S  R  Q  *  V  I  V  H  *  I  V  I  *  N  W  I  S  Y  D  I  P  V  I  P  T  K  I  *  S  S  H  H  F  P  I  Q  L  K  H  V  A  S  G  F  F  S  L  V  S  N  M  H  *  *  S  C  R  *  Y  F  H  P  Y  D  F  S  S  I  W  S  P  L  A  P  S  I  I  S  *  *  H  M  L  T  C  A  G  C  G  Q  T  I  S  F  D  F  L  P  F  Y  P  R  V  Q  L  G  L  P  K  F  P  D  Y  L  M  I  K  G  H  L  Q  A  N  V  Q  A  *  S  *  R  A  K  V  Y  K  E  N  S  L  L  V  A  P  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0066C13.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="92347" e_stop="92580"/>
            <exon e_start="92722" e_stop="92815"/>
            <exon e_start="95202" e_stop="95297"/>
            <exon e_start="95390" e_stop="95454"/>
            <exon e_start="95983" e_stop="96052"/>
            <exon e_start="96130" e_stop="96160"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.898" acc_prob="0.999" e_score="0.991"/>
          <exon-intron don_prob="0.664" acc_prob="0.942" e_score="1.000"/>
          <exon-intron don_prob="0.902" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.910" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.949" acc_prob="0.971" e_score="0.986"/>
          <exon-only e_score="0.968"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="92347" e_stop="92580" e_length="234"/>
          </exon>
          <intron i_serial="1" don_prob="0.898" acc_prob="0.999">
            <gDNA_intron_boundary i_start="92581" i_stop="92721" i_length="141"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92722" e_stop="92815" e_length="94"/>
          </exon>
          <intron i_serial="2" don_prob="0.664" acc_prob="0.942">
            <gDNA_intron_boundary i_start="92816" i_stop="95201" i_length="2386"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="95202" e_stop="95297" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.902" acc_prob="0.000">
            <gDNA_intron_boundary i_start="95298" i_stop="95389" i_length="92"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="95390" e_stop="95454" e_length="65"/>
          </exon>
          <intron i_serial="4" don_prob="0.910" acc_prob="0.998">
            <gDNA_intron_boundary i_start="95455" i_stop="95982" i_length="528"/>
          </intron>
          <exon e_serial="5" e_score="0.986">
            <gDNA_exon_boundary e_start="95983" e_stop="96052" e_length="70"/>
          </exon>
          <intron i_serial="5" don_prob="0.949" acc_prob="0.971">
            <gDNA_intron_boundary i_start="96053" i_stop="96129" i_length="77"/>
          </intron>
          <exon e_serial="6" e_score="0.968">
            <gDNA_exon_boundary e_start="96130" e_stop="96160" e_length="31"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92347" stop="92580"/>
              <exon start="92722" stop="92815"/>
              <exon start="95202" stop="95297"/>
              <exon start="95390" stop="95454"/>
              <exon start="95983" stop="96052"/>
              <exon start="96130" stop="96160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310222" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="6" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGATTTCCACTTTCTTTATCTTCATTCGCCGGCGTATAAGTTAAACAGTAGAGGAATTTTAAAACAAAGATATAGAATGATGTCCCTTTCTCTTTCTCTTTCTTATCCTATACATCGTTTTGCTTCCTACAATAAACAACTATGCGCTTTGAGATCTCCTCAATCTCATCACACTAGGATTTCTCAGCACAAATTGCAGCAAAGCTCTAGTTTTCTTGGATATAACCCTCTCAG : AGTTTCAATTGATGTAAGTGGAGAGATGAATATGAAGAGACGTGGAGGAGTGGTTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGG : GGTTCTCATGCTTGCGAAGGGCACTGCTATTCACAAGTCTTTTCTTGTTCCTTTATTTGCTTTACAAGCTCCTACTGCAGTTGTCTCGTGGATCCA : GGGTGAATATGGCATTTGGTCAGCATTTTTGGCACTTCTTGTTCGTCTCTTCTTCTCCTTTCCTG : GTGAACTTGAATTGCCATTTATAGCATTATTGATGGTAATTGTGGCTCCTTATCAAGTTGCAAATCTAAG : GGGGACAAAGGAAGGTGTCATTCTTTCCTTG</gDNA_template>
            <first_frame> *  F  P  L  S  L  S  S  F  A  G  V  *  V  K  Q  *  R  N  F  K  T  K  I  *  N  D  V  P  F  S  F  S  F  L  S  Y  T  S  F  C  F  L  Q  *  T  T  M  R  F  E  I  S  S  I  S  S  H  *  D  F  S  A  Q  I  A  A  K  L  *  F  S  W  I  *  P  S  Q  :  S  F  N  *  C  K  W  R  D  E  Y  E  E  T  W  R  S  G  L  F  C  C  C  S  Y  S  *  K  S  T  V   : G  F  S  C  L  R  R  A  L  L  F  T  S  L  F  L  F  L  Y  L  L  Y  K  L  L  L  Q  L  S  R  G  S   : R  V  N  M  A  F  G  Q  H  F  W  H  F  L  F  V  S  S  S  P  F  L  :  V  N  L  N  C  H  L  *  H  Y  *  W  *  L  W  L  L  I  K  L  Q  I  *   : G  G  Q  R  K  V  S  F  F  P   </first_frame>
            <second_frame>  D  F  H  F  L  Y  L  H  S  P  A  Y  K  L  N  S  R  G  I  L  K  Q  R  Y  R  M  M  S  L  S  L  S  L  S  Y  P  I  H  R  F  A  S  Y  N  K  Q  L  C  A  L  R  S  P  Q  S  H  H  T  R  I  S  Q  H  K  L  Q  Q  S  S  S  F  L  G  Y  N  P  L  R :   V  S  I  D  V  S  G  E  M  N  M  K  R  R  G  G  V  V  C  S  A  A  A  L  T  P  R  N  L  Q  W  :  G  S  H  A  C  E  G  H  C  Y  S  Q  V  F  S  C  S  F  I  C  F  T  S  S  Y  C  S  C  L  V  D  P  :  G  *  I  W  H  L  V  S  I  F  G  T  S  C  S  S  L  L  L  L  S  W :   *  T  *  I  A  I  Y  S  I  I  D  G  N  C  G  S  L  S  S  C  K  S  K  :  G  D  K  G  R  C  H  S  F  L  </second_frame>
            <third_frame>   I  S  T  F  F  I  F  I  R  R  R  I  S  *  T  V  E  E  F  *  N  K  D  I  E  *  C  P  F  L  F  L  F  L  I  L  Y  I  V  L  L  P  T  I  N  N  Y  A  L  *  D  L  L  N  L  I  T  L  G  F  L  S  T  N  C  S  K  A  L  V  F  L  D  I  T  L  S   : E  F  Q  L  M  *  V  E  R  *  I  *  R  D  V  E  E  W  F  V  L  L  L  L  L  L  L  E  I  Y  S  G :   V  L  M  L  A  K  G  T  A  I  H  K  S  F  L  V  P  L  F  A  L  Q  A  P  T  A  V  V  S  W  I  Q :   G  E  Y  G  I  W  S  A  F  L  A  L  L  V  R  L  F  F  S  F  P   : G  E  L  E  L  P  F  I  A  L  L  M  V  I  V  A  P  Y  Q  V  A  N  L  R :   G  T  K  E  G  V  I  L  S  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92348" stop="92580"/>
                    <exon start="92722" stop="92815"/>
                    <exon start="95202" stop="95297"/>
                    <exon start="95390" stop="95395"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>426</number_coding_nucleotides>
                  <number_encoded_amino_acids>142</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DFHFLYLHSPAYKLNSRGILKQRYRMMSLSLSLSYPIHRFASYNKQLCALRSPQSHHTRISQHKLQQSSSFLGYNPLRVSIDVSGEMNMKRRGGVVCSAAALTPRNLQWGSHACEGHCYSQVFSCSFICFTSSYCSCLVDPG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="101506" PGL_stop="100689"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="101506" e_stop="101396"/>
            <exon e_start="101315" e_stop="100689"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="101506" e_stop="101396" e_length="111"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="101395" i_stop="101316" i_length="80"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="101315" e_stop="100689" e_length="627"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101506" stop="101396"/>
              <exon start="101315" stop="100689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538879" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101506" stop="101396"/>
              <exon start="101315" stop="100689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538882" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101505" stop="101396"/>
              <exon start="101315" stop="100963"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278938" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGAGCTGCCCGATGGGTCGGGCGTGGTTGTAACAATTGGGAAGTATGTCACACCAAATCACATGGATATTAATGGCAATGGAGTTGAACCAGATTTCAGGAATTTTCCTG : CTTGGAATGAAGTCAACAATCGTTTGTCAAAGTGCCACAAACAACAAGATGGATAAGGTAAGGGTTTCTATTTTCTTCTTCTTGTTTCTTTATTAACTTGTGGTTTCTTATCATGGCTCTTTCTGCCACATACAGCTCGCTCGTTTTCCTTTCAGTGTCATTCCGATTCATCATCATGACAGATGAATAACTTGGGGTAGTCCTTCGGTCGTGCAACACTCAGTTTGATATGATATTAACAGATGTTAACCTTCACAGTCGCTTAGCTTCACCCTTAGCCTGAGCATCACCAGGAAGAAACAAAGTACGTAATGCATACTCTTCTATTGCCTAGACATCCTCTTGAAGAACAAATCAGATCGATATCAGCAACTTTAATCTATCAAGATGCAGAACTGGCCATTGGATGATAAAATTAGTAGGCCAGAACCAGCTGAGTTGTGTCATTGTATTTATTTTACTGATAGCAGGTGCCTATGGATGATAGTAGCACAAGTTTTGGACATAAATAACTAGCAATTTACCTGATACAACCAACAGTTCATATTGTACACACATTTTGAGTAAATGTAAATCAATTTGCGCCTCATTTTGATGTTCCCTAATAAGATGTACTTCTGTATGAAC</gDNA_template>
            <first_frame> L  S  C  P  M  G  R  A  W  L  *  Q  L  G  S  M  S  H  Q  I  T  W  I  L  M  A  M  E  L  N  Q  I  S  G  I  F  L  :  L  G  M  K  S  T  I  V  C  Q  S  A  T  N  N  K  M  D  K  V  R  V  S  I  F  F  F  L  F  L  Y  *  L  V  V  S  Y  H  G  S  F  C  H  I  Q  L  A  R  F  P  F  S  V  I  P  I  H  H  H  D  R  *  I  T  W  G  S  P  S  V  V  Q  H  S  V  *  Y  D  I  N  R  C  *  P  S  Q  S  L  S  F  T  L  S  L  S  I  T  R  K  K  Q  S  T  *  C  I  L  F  Y  C  L  D  I  L  L  K  N  K  S  D  R  Y  Q  Q  L  *  S  I  K  M  Q  N  W  P  L  D  D  K  I  S  R  P  E  P  A  E  L  C  H  C  I  Y  F  T  D  S  R  C  L  W  M  I  V  A  Q  V  L  D  I  N  N  *  Q  F  T  *  Y  N  Q  Q  F  I  L  Y  T  H  F  E  *  M  *  I  N  L  R  L  I  L  M  F  P  N  K  M  Y  F  C  M  N </first_frame>
            <second_frame>  *  A  A  R  W  V  G  R  G  C  N  N  W  E  V  C  H  T  K  S  H  G  Y  *  W  Q  W  S  *  T  R  F  Q  E  F  S  C :   L  E  *  S  Q  Q  S  F  V  K  V  P  Q  T  T  R  W  I  R  *  G  F  L  F  S  S  S  C  F  F  I  N  L  W  F  L  I  M  A  L  S  A  T  Y  S  S  L  V  F  L  S  V  S  F  R  F  I  I  M  T  D  E  *  L  G  V  V  L  R  S  C  N  T  Q  F  D  M  I  L  T  D  V  N  L  H  S  R  L  A  S  P  L  A  *  A  S  P  G  R  N  K  V  R  N  A  Y  S  S  I  A  *  T  S  S  *  R  T  N  Q  I  D  I  S  N  F  N  L  S  R  C  R  T  G  H  W  M  I  K  L  V  G  Q  N  Q  L  S  C  V  I  V  F  I  L  L  I  A  G  A  Y  G  *  *  *  H  K  F  W  T  *  I  T  S  N  L  P  D  T  T  N  S  S  Y  C  T  H  I  L  S  K  C  K  S  I  C  A  S  F  *  C  S  L  I  R  C  T  S  V  *   </second_frame>
            <third_frame>   E  L  P  D  G  S  G  V  V  V  T  I  G  K  Y  V  T  P  N  H  M  D  I  N  G  N  G  V  E  P  D  F  R  N  F  P   : A  W  N  E  V  N  N  R  L  S  K  C  H  K  Q  Q  D  G  *  G  K  G  F  Y  F  L  L  L  V  S  L  L  T  C  G  F  L  S  W  L  F  L  P  H  T  A  R  S  F  S  F  Q  C  H  S  D  S  S  S  *  Q  M  N  N  L  G  *  S  F  G  R  A  T  L  S  L  I  *  Y  *  Q  M  L  T  F  T  V  A  *  L  H  P  *  P  E  H  H  Q  E  E  T  K  Y  V  M  H  T  L  L  L  P  R  H  P  L  E  E  Q  I  R  S  I  S  A  T  L  I  Y  Q  D  A  E  L  A  I  G  *  *  N  *  *  A  R  T  S  *  V  V  S  L  Y  L  F  Y  *  *  Q  V  P  M  D  D  S  S  T  S  F  G  H  K  *  L  A  I  Y  L  I  Q  P  T  V  H  I  V  H  T  F  *  V  N  V  N  Q  F  A  P  H  F  D  V  P  *  *  D  V  L  L  Y  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0066C13.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="108832" PGL_stop="105632"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="108832" e_stop="108686"/>
            <exon e_start="107278" e_stop="107159"/>
            <exon e_start="106472" e_stop="106344"/>
            <exon e_start="105691" e_stop="105632"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.989" acc_prob="0.933" e_score="0.952"/>
          <exon-intron don_prob="0.999" acc_prob="0.078" e_score="0.983"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="0.969"/>
          <exon-only e_score="0.950"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.952">
            <gDNA_exon_boundary e_start="108832" e_stop="108686" e_length="147"/>
          </exon>
          <intron i_serial="1" don_prob="0.989" acc_prob="0.933">
            <gDNA_intron_boundary i_start="108685" i_stop="107279" i_length="1407"/>
          </intron>
          <exon e_serial="2" e_score="0.983">
            <gDNA_exon_boundary e_start="107278" e_stop="107159" e_length="120"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.078">
            <gDNA_intron_boundary i_start="107158" i_stop="106473" i_length="686"/>
          </intron>
          <exon e_serial="3" e_score="0.969">
            <gDNA_exon_boundary e_start="106472" e_stop="106344" e_length="129"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="106343" i_stop="105692" i_length="652"/>
          </intron>
          <exon e_serial="4" e_score="0.950">
            <gDNA_exon_boundary e_start="105691" e_stop="105632" e_length="60"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108832" stop="108686"/>
              <exon start="107278" stop="107159"/>
              <exon start="106472" stop="106344"/>
              <exon start="105691" stop="105632"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331479" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108793" stop="108686"/>
              <exon start="107278" stop="107159"/>
              <exon start="106472" stop="106359"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331341" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACGAGGGGGAGGAGGTGTATGAGAAAGACACTGAAGTATCCAAAGTGGTGAGCAATGAAAACATTGTGGAAGAAGCTTGGCAGATTGTCAATGACAGCTTTCTTAACACCAGCGATCGTCGTTCTTGGTCTCCTGAATCGTGGCTT : CAAAAGAAAGATGACATCTTAAGTTCATCAATTCAGACAAGGTCAAAAGCACATGATATCATCAAGCGTATGTTGGCTAGCTTGGGTGACCCCTATACACGGTTTCTTTCTCCTGAACAG : ATGGCTAGATATGATATGACTGGGATTGGAGTTAACCTCAGGGATGTTCCAGATGGCAATGGAGGTTCAAAACTGAAGGTTTTAGGGCTCCTATTGGATGGCCCTGCCCATAATGCCGGTGTACGACAG : GGAGATGAACTGATATCTGTGAATGGGGTGGATGTGCTGGGTAAATCTTCCTTTGAAGCA</gDNA_template>
            <first_frame> N  E  G  E  E  V  Y  E  K  D  T  E  V  S  K  V  V  S  N  E  N  I  V  E  E  A  W  Q  I  V  N  D  S  F  L  N  T  S  D  R  R  S  W  S  P  E  S  W  L  :  Q  K  K  D  D  I  L  S  S  S  I  Q  T  R  S  K  A  H  D  I  I  K  R  M  L  A  S  L  G  D  P  Y  T  R  F  L  S  P  E  Q  :  M  A  R  Y  D  M  T  G  I  G  V  N  L  R  D  V  P  D  G  N  G  G  S  K  L  K  V  L  G  L  L  L  D  G  P  A  H  N  A  G  V  R  Q  :  G  D  E  L  I  S  V  N  G  V  D  V  L  G  K  S  S  F  E  A </first_frame>
            <second_frame>  T  R  G  R  R  C  M  R  K  T  L  K  Y  P  K  W  *  A  M  K  T  L  W  K  K  L  G  R  L  S  M  T  A  F  L  T  P  A  I  V  V  L  G  L  L  N  R  G  F :   K  R  K  M  T  S  *  V  H  Q  F  R  Q  G  Q  K  H  M  I  S  S  S  V  C  W  L  A  W  V  T  P  I  H  G  F  F  L  L  N  R :   W  L  D  M  I  *  L  G  L  E  L  T  S  G  M  F  Q  M  A  M  E  V  Q  N  *  R  F  *  G  S  Y  W  M  A  L  P  I  M  P  V  Y  D  R :   E  M  N  *  Y  L  *  M  G  W  M  C  W  V  N  L  P  L  K   </second_frame>
            <third_frame>   R  G  G  G  G  V  *  E  R  H  *  S  I  Q  S  G  E  Q  *  K  H  C  G  R  S  L  A  D  C  Q  *  Q  L  S  *  H  Q  R  S  S  F  L  V  S  *  I  V  A   : S  K  E  R  *  H  L  K  F  I  N  S  D  K  V  K  S  T  *  Y  H  Q  A  Y  V  G  *  L  G  *  P  L  Y  T  V  S  F  S  *  T   : D  G  *  I  *  Y  D  W  D  W  S  *  P  Q  G  C  S  R  W  Q  W  R  F  K  T  E  G  F  R  A  P  I  G  W  P  C  P  *  C  R  C  T  T   : G  R  *  T  D  I  C  E  W  G  G  C  A  G  *  I  F  L  *  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108832" stop="108686"/>
                    <exon start="107278" stop="107159"/>
                    <exon start="106472" stop="106344"/>
                    <exon start="105691" stop="105632"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>456</number_coding_nucleotides>
                  <number_encoded_amino_acids>152</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NEGEEVYEKDTEVSKVVSNENIVEEAWQIVNDSFLNTSDRRSWSPESWLQKKDDILSSSIQTRSKAHDIIKRMLASLGDPYTRFLSPEQMARYDMTGIGVNLRDVPDGNGGSKLKVLGLLLDGPAHNAGVRQGDELISVNGVDVLGKSSFEA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="111830" PGL_stop="120091"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="111830" e_stop="112114"/>
            <exon e_start="112975" e_stop="113018"/>
            <exon e_start="113506" e_stop="113605"/>
            <exon e_start="113718" e_stop="113829"/>
            <exon e_start="114419" e_stop="115032"/>
            <exon e_start="116099" e_stop="116381"/>
            <exon e_start="117069" e_stop="117339"/>
            <exon e_start="117752" e_stop="117913"/>
            <exon e_start="118803" e_stop="119258"/>
            <exon e_start="119526" e_stop="120091"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.982" acc_prob="0.963" e_score="0.996"/>
          <exon-intron don_prob="0.720" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.484" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.951" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.741" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="111830" e_stop="112114" e_length="285"/>
          </exon>
          <intron i_serial="1" don_prob="0.982" acc_prob="0.963">
            <gDNA_intron_boundary i_start="112115" i_stop="112974" i_length="860"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="112975" e_stop="113018" e_length="44"/>
          </exon>
          <intron i_serial="2" don_prob="0.720" acc_prob="0.993">
            <gDNA_intron_boundary i_start="113019" i_stop="113505" i_length="487"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="113506" e_stop="113605" e_length="100"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.484">
            <gDNA_intron_boundary i_start="113606" i_stop="113717" i_length="112"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="113718" e_stop="113829" e_length="112"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.996">
            <gDNA_intron_boundary i_start="113830" i_stop="114418" i_length="589"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="114419" e_stop="115032" e_length="614"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="0.998">
            <gDNA_intron_boundary i_start="115033" i_stop="116098" i_length="1066"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="116099" e_stop="116381" e_length="283"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="116382" i_stop="117068" i_length="687"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="117069" e_stop="117339" e_length="271"/>
          </exon>
          <intron i_serial="7" don_prob="0.994" acc_prob="0.951">
            <gDNA_intron_boundary i_start="117340" i_stop="117751" i_length="412"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="117752" e_stop="117913" e_length="162"/>
          </exon>
          <intron i_serial="8" don_prob="0.989" acc_prob="1.000">
            <gDNA_intron_boundary i_start="117914" i_stop="118802" i_length="889"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="118803" e_stop="119258" e_length="456"/>
          </exon>
          <intron i_serial="9" don_prob="0.989" acc_prob="0.741">
            <gDNA_intron_boundary i_start="119259" i_stop="119525" i_length="267"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="119526" e_stop="120091" e_length="566"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111830" stop="112114"/>
              <exon start="112975" stop="113018"/>
              <exon start="113506" stop="113605"/>
              <exon start="113718" stop="113829"/>
              <exon start="114419" stop="115032"/>
              <exon start="116099" stop="116381"/>
              <exon start="117069" stop="117339"/>
              <exon start="117752" stop="117913"/>
              <exon start="118803" stop="119258"/>
              <exon start="119526" stop="120073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745640" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114560" stop="115032"/>
              <exon start="116099" stop="116157"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E358836" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114694" stop="115032"/>
              <exon start="116099" stop="116381"/>
              <exon start="117069" stop="117224"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E737473" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116160" stop="116381"/>
              <exon start="117069" stop="117339"/>
              <exon start="117752" stop="117913"/>
              <exon start="118803" stop="119054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731908" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="119048" stop="119258"/>
              <exon start="119526" stop="120086"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345144" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="119130" stop="119258"/>
              <exon start="119526" stop="120091"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E546401" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="119168" stop="119258"/>
              <exon start="119526" stop="120086"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716453" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="119559" stop="120074"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281083" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGACCCAAAAAACCCTAAACTATAACAGATCTGAAACAAGAAAATATTTTGTGGGTCTTTCTTGTTTTTTTCCTCTCTTTTTTTTTAGAGAAAAAGAGTTGTCTTCTTCAAAGATGAGTAGCAGAAACAATGGTGGAGTTGGGGTACAATCGATACCCGCAGGGTCAAGAAAGATGGTACAAAGCTTAAAGGAGATAGTTAACTGTCCTGAACCTGAGATCTATGCTATGCTCAAAGAATGTAATATGGACCCCAATGAAGCTGTCAATAGGCTTCTTACTCAAG : ATACTTTTCATGAGGTGAAGAGCAAACGTGAAAAGAGAAAAGAG : AGTAAGGATACGACTGAATCTAGGCCACGTGGTGCAATTAGCAACTCAGGCCGTGGTAGCAGGGGAGGTGCAGAACGATATGTTGGGCGCGGTGGGTCAG : CCGAGTCTACCAAGCTTATTCCTGGATACAGAAAAGATAATGGATCAAAGACGAGTAACCTGACTTCTACTCTAGGAGTTTCCGGAATAAGCAGGAGGGCCACAACAATCAG : TGATATTGCTGCAAATGAAAGTAAAAAGTCAGCACCTGCAGCAGTTGATGGTGTTTCATCAGTCTCACAGCATGAGACTTCTTCTGGATATCAACCTACTTGGGGTGGGGTGCCCGGTCAAGTTTCCATGGCTGATATTGTGAAGATGGGTAGGCCACAGAGCAAAGTGCCAAGTGCACCTAGTGTATCTCACCACAATGTCAATGCCGAGCAAAACCATATTCAGGGGCTCCCTTCTGGTGCATCACATCAAAATACTCAGTGGTCTGATGATCATACTACCAAAATTTCTGAGGTACACCGAGAGCCACAACATCTTTCAACTGATGAGGAATGGCCTCTAATTGAGCCGCCATCAGTTGCTAGTCAGACATCTATCTCAGAGCCTCCTGCTGATTCGGAGCTGCATCCTGATCCAACTAACATGTCATATGACAGAATTAATCATCAAAATGAGATTGATGAAGTTCAGGGGACAGATAACTGCACGATTGAAAATCTTGGTAGTCCTTCAAGCAGAAGGTTGCAGGAGGATAATGCTGGAGGTGCATCTATTTATGAGAATGACCTCTACGGATATCAGAACCAGAATCATACCTTTGACCATCAACAAG : CTGAGGATGTTAACAACTCTGTTTCATCAGTTTCTGCAAACTTGCAACAGTTAAATGTACAAGATGATGGAGGGGTGCCACCTGAGGGAGATGGTCCTTCTGTTGTAATACCAGACCATCTTCAAGTTCAAACTGCAGACTGCTCACACCTGAGCTTTGGTAGCTTTGGCTCTGGTATTGGTGGCTCCTTTTCTGGGCCTTTGGCATCTGCTCCAGTGACTAGTACTTTGGAAGATGCACCTAAGGAAGTGGATGGTTCATCAGTTGGGCACTTGGGATCCAG : AGCTTCAGAATACTATGGTGATGAGTCTCTCAGACATGCATCTGAGAGTAACTTATACCATAGAACTAATGCAAGTTCTGTAAATTACGATTCACCTGCTTCACAACCAGAACCTTTGAAATCAGAAACAAATGAACAAGGAAATCAATATTCGTATCCCTCTTCTGCTGCTGGCTACACATATGAAAGTGCACAACAATTAACTGCAGCATTTAGTCAGCCACAGACAAGTTCCCAGATGCAAAATCTCACTCCTTTCTCTAATGTAATG : GCTTTCACAAATTCATTGCCTAGCACCTTGTTGGCTGCTAATGCTCATGCTGGTCGTGAAACTGATCTTTCATACTTACCTTTTTCTGCAACACAAGCAATGGCTATGAAATATGGCAGCTCTGTTTCTTCAATTGGTGGTTCAACAATTTCCATGCCTGAG : TCTTTGAAGGGTGCTGGTTTTCCATCAGCACAGCCTACACAGCAGCCACTTTCTGGAACTAGTGTCACCACTGGACCTACTGTGCCGCAACATCTTGCTGTGCATCCATATAACCAACCACCTCTGGGACCATTTGCTAACATGATAGGTTATCCCTTTTTGCCTCAGAGTTATACATATATGCCATCTGCATTCCAGCAACCATTTGCTGGTAACAGTAATTATCATCAGTCACTGGCGGCGGTGCTTCCTCAATATAAGAACAGTGTGTCAGTCAGCAGCTTACCTCAGCCAGCCAGTGTTGCTTCTGCGTATGGTGGTTTTGGAAATACAGCAAGTATCCCTGGTAACTTCCCAATGAATCCCCCTGCTGCTCCCTCTGGTACTAACTTGAGTTACGATGATGTGTTGAGCTCTCAGTACAAGGATACCAATCATTTAATGTCTCTTCAGCAG : AGCGAGAACTCAGCTATGTGGCATGGACCCGGTTCAAGGACAATGTCAGCTGTTCCTGCTAACACATATTATGGTTTTCAAGGTCAAAACCAGCAAAGTAGTGGATTTAGGCAAGCTCAACAGCCGCTGCAAAATCATGGATCCTTGGGGTACCCAAATTTCTACCATTCTCAGGCGGGGATCTCATTAGAACATCAACAACAAAATCCGAGGGATGGGTCATTGGGTGGTGGATCTCAAGGCCAGCCAAAGCAGTTTCAACAGCTATGGCAAAGTGGCGGCTACTAATCTCTTACTGCCTCCTTCTTTTTTGGAGTCTTGTAATGAGTGTGAAAGTGGCTATAGGGTGTTGCTTTGGAAGCAACTAGAATGCACAATCAATTGGATGCTTACCTGTGCCTCAAGGTTGTACTTTACATGTTTGTCATCAGTCAAATGTAACGTAGGATGTGAGCTAACGTCGTGCTAGTGGACTTGTCTTCTGTTTCATCAACTCTTTGTTACACAGTTAACCCCATGGTTTCTTTATTAATAGTGAGAAGTGTTCTGTCTCCACTGGAAATGCA</gDNA_template>
            <first_frame> R  P  K  K  P  *  T  I  T  D  L  K  Q  E  N  I  L  W  V  F  L  V  F  F  L  S  F  F  L  E  K  K  S  C  L  L  Q  R  *  V  A  E  T  M  V  E  L  G  Y  N  R  Y  P  Q  G  Q  E  R  W  Y  K  A  *  R  R  *  L  T  V  L  N  L  R  S  M  L  C  S  K  N  V  I  W  T  P  M  K  L  S  I  G  F  L  L  K  :  I  L  F  M  R  *  R  A  N  V  K  R  E  K  R :   V  R  I  R  L  N  L  G  H  V  V  Q  L  A  T  Q  A  V  V  A  G  E  V  Q  N  D  M  L  G  A  V  G  Q  :  P  S  L  P  S  L  F  L  D  T  E  K  I  M  D  Q  R  R  V  T  *  L  L  L  *  E  F  P  E  *  A  G  G  P  Q  Q  S   : V  I  L  L  Q  M  K  V  K  S  Q  H  L  Q  Q  L  M  V  F  H  Q  S  H  S  M  R  L  L  L  D  I  N  L  L  G  V  G  C  P  V  K  F  P  W  L  I  L  *  R  W  V  G  H  R  A  K  C  Q  V  H  L  V  Y  L  T  T  M  S  M  P  S  K  T  I  F  R  G  S  L  L  V  H  H  I  K  I  L  S  G  L  M  I  I  L  P  K  F  L  R  Y  T  E  S  H  N  I  F  Q  L  M  R  N  G  L  *  L  S  R  H  Q  L  L  V  R  H  L  S  Q  S  L  L  L  I  R  S  C  I  L  I  Q  L  T  C  H  M  T  E  L  I  I  K  M  R  L  M  K  F  R  G  Q  I  T  A  R  L  K  I  L  V  V  L  Q  A  E  G  C  R  R  I  M  L  E  V  H  L  F  M  R  M  T  S  T  D  I  R  T  R  I  I  P  L  T  I  N  K  :  L  R  M  L  T  T  L  F  H  Q  F  L  Q  T  C  N  S  *  M  Y  K  M  M  E  G  C  H  L  R  E  M  V  L  L  L  *  Y  Q  T  I  F  K  F  K  L  Q  T  A  H  T  *  A  L  V  A  L  A  L  V  L  V  A  P  F  L  G  L  W  H  L  L  Q  *  L  V  L  W  K  M  H  L  R  K  W  M  V  H  Q  L  G  T  W  D  P   : E  L  Q  N  T  M  V  M  S  L  S  D  M  H  L  R  V  T  Y  T  I  E  L  M  Q  V  L  *  I  T  I  H  L  L  H  N  Q  N  L  *  N  Q  K  Q  M  N  K  E  I  N  I  R  I  P  L  L  L  L  A  T  H  M  K  V  H  N  N  *  L  Q  H  L  V  S  H  R  Q  V  P  R  C  K  I  S  L  L  S  L  M  *  W :   L  S  Q  I  H  C  L  A  P  C  W  L  L  M  L  M  L  V  V  K  L  I  F  H  T  Y  L  F  L  Q  H  K  Q  W  L  *  N  M  A  A  L  F  L  Q  L  V  V  Q  Q  F  P  C  L  S :   L  *  R  V  L  V  F  H  Q  H  S  L  H  S  S  H  F  L  E  L  V  S  P  L  D  L  L  C  R  N  I  L  L  C  I  H  I  T  N  H  L  W  D  H  L  L  T  *  *  V  I  P  F  C  L  R  V  I  H  I  C  H  L  H  S  S  N  H  L  L  V  T  V  I  I  I  S  H  W  R  R  C  F  L  N  I  R  T  V  C  Q  S  A  A  Y  L  S  Q  P  V  L  L  L  R  M  V  V  L  E  I  Q  Q  V  S  L  V  T  S  Q  *  I  P  L  L  L  P  L  V  L  T  *  V  T  M  M  C  *  A  L  S  T  R  I  P  I  I  *  C  L  F  S  R :   A  R  T  Q  L  C  G  M  D  P  V  Q  G  Q  C  Q  L  F  L  L  T  H  I  M  V  F  K  V  K  T  S  K  V  V  D  L  G  K  L  N  S  R  C  K  I  M  D  P  W  G  T  Q  I  S  T  I  L  R  R  G  S  H  *  N  I  N  N  K  I  R  G  M  G  H  W  V  V  D  L  K  A  S  Q  S  S  F  N  S  Y  G  K  V  A  A  T  N  L  L  L  P  P  S  F  L  E  S  C  N  E  C  E  S  G  Y  R  V  L  L  W  K  Q  L  E  C  T  I  N  W  M  L  T  C  A  S  R  L  Y  F  T  C  L  S  S  V  K  C  N  V  G  C  E  L  T  S  C  *  W  T  C  L  L  F  H  Q  L  F  V  T  Q  L  T  P  W  F  L  Y  *  *  *  E  V  F  C  L  H  W  K  C  </first_frame>
            <second_frame>  D  P  K  N  P  K  L  *  Q  I  *  N  K  K  I  F  C  G  S  F  L  F  F  S  S  L  F  F  *  R  K  R  V  V  F  F  K  D  E  *  Q  K  Q  W  W  S  W  G  T  I  D  T  R  R  V  K  K  D  G  T  K  L  K  G  D  S  *  L  S  *  T  *  D  L  C  Y  A  Q  R  M  *  Y  G  P  Q  *  S  C  Q  *  A  S  Y  S  R :   Y  F  S  *  G  E  E  Q  T  *  K  E  K  R   : E  *  G  Y  D  *  I  *  A  T  W  C  N  *  Q  L  R  P  W  *  Q  G  R  C  R  T  I  C  W  A  R  W  V  S :   R  V  Y  Q  A  Y  S  W  I  Q  K  R  *  W  I  K  D  E  *  P  D  F  Y  S  R  S  F  R  N  K  Q  E  G  H  N  N  Q  :  *  Y  C  C  K  *  K  *  K  V  S  T  C  S  S  *  W  C  F  I  S  L  T  A  *  D  F  F  W  I  S  T  Y  L  G  W  G  A  R  S  S  F  H  G  *  Y  C  E  D  G  *  A  T  E  Q  S  A  K  C  T  *  C  I  S  P  Q  C  Q  C  R  A  K  P  Y  S  G  A  P  F  W  C  I  T  S  K  Y  S  V  V  *  *  S  Y  Y  Q  N  F  *  G  T  P  R  A  T  T  S  F  N  *  *  G  M  A  S  N  *  A  A  I  S  C  *  S  D  I  Y  L  R  A  S  C  *  F  G  A  A  S  *  S  N  *  H  V  I  *  Q  N  *  S  S  K  *  D  *  *  S  S  G  D  R  *  L  H  D  *  K  S  W  *  S  F  K  Q  K  V  A  G  G  *  C  W  R  C  I  Y  L  *  E  *  P  L  R  I  S  E  P  E  S  Y  L  *  P  S  T  S :   *  G  C  *  Q  L  C  F  I  S  F  C  K  L  A  T  V  K  C  T  R  *  W  R  G  A  T  *  G  R  W  S  F  C  C  N  T  R  P  S  S  S  S  N  C  R  L  L  T  P  E  L  W  *  L  W  L  W  Y  W  W  L  L  F  W  A  F  G  I  C  S  S  D  *  Y  F  G  R  C  T  *  G  S  G  W  F  I  S  W  A  L  G  I  Q  :  S  F  R  I  L  W  *  *  V  S  Q  T  C  I  *  E  *  L  I  P  *  N  *  C  K  F  C  K  L  R  F  T  C  F  T  T  R  T  F  E  I  R  N  K  *  T  R  K  S  I  F  V  S  L  F  C  C  W  L  H  I  *  K  C  T  T  I  N  C  S  I  *  S  A  T  D  K  F  P  D  A  K  S  H  S  F  L  *  C  N   : G  F  H  K  F  I  A  *  H  L  V  G  C  *  C  S  C  W  S  *  N  *  S  F  I  L  T  F  F  C  N  T  S  N  G  Y  E  I  W  Q  L  C  F  F  N  W  W  F  N  N  F  H  A  *   : V  F  E  G  C  W  F  S  I  S  T  A  Y  T  A  A  T  F  W  N  *  C  H  H  W  T  Y  C  A  A  T  S  C  C  A  S  I  *  P  T  T  S  G  T  I  C  *  H  D  R  L  S  L  F  A  S  E  L  Y  I  Y  A  I  C  I  P  A  T  I  C  W  *  Q  *  L  S  S  V  T  G  G  G  A  S  S  I  *  E  Q  C  V  S  Q  Q  L  T  S  A  S  Q  C  C  F  C  V  W  W  F  W  K  Y  S  K  Y  P  W  *  L  P  N  E  S  P  C  C  S  L  W  Y  *  L  E  L  R  *  C  V  E  L  S  V  Q  G  Y  Q  S  F  N  V  S  S  A   : E  R  E  L  S  Y  V  A  W  T  R  F  K  D  N  V  S  C  S  C  *  H  I  L  W  F  S  R  S  K  P  A  K  *  W  I  *  A  S  S  T  A  A  A  K  S  W  I  L  G  V  P  K  F  L  P  F  S  G  G  D  L  I  R  T  S  T  T  K  S  E  G  W  V  I  G  W  W  I  S  R  P  A  K  A  V  S  T  A  M  A  K  W  R  L  L  I  S  Y  C  L  L  L  F  W  S  L  V  M  S  V  K  V  A  I  G  C  C  F  G  S  N  *  N  A  Q  S  I  G  C  L  P  V  P  Q  G  C  T  L  H  V  C  H  Q  S  N  V  T  *  D  V  S  *  R  R  A  S  G  L  V  F  C  F  I  N  S  L  L  H  S  *  P  H  G  F  F  I  N  S  E  K  C  S  V  S  T  G  N  A </second_frame>
            <third_frame>   T  Q  K  T  L  N  Y  N  R  S  E  T  R  K  Y  F  V  G  L  S  C  F  F  P  L  F  F  F  R  E  K  E  L  S  S  S  K  M  S  S  R  N  N  G  G  V  G  V  Q  S  I  P  A  G  S  R  K  M  V  Q  S  L  K  E  I  V  N  C  P  E  P  E  I  Y  A  M  L  K  E  C  N  M  D  P  N  E  A  V  N  R  L  L  T  Q   : D  T  F  H  E  V  K  S  K  R  E  K  R  K  E  :  S  K  D  T  T  E  S  R  P  R  G  A  I  S  N  S  G  R  G  S  R  G  G  A  E  R  Y  V  G  R  G  G  S   : A  E  S  T  K  L  I  P  G  Y  R  K  D  N  G  S  K  T  S  N  L  T  S  T  L  G  V  S  G  I  S  R  R  A  T  T  I  S :   D  I  A  A  N  E  S  K  K  S  A  P  A  A  V  D  G  V  S  S  V  S  Q  H  E  T  S  S  G  Y  Q  P  T  W  G  G  V  P  G  Q  V  S  M  A  D  I  V  K  M  G  R  P  Q  S  K  V  P  S  A  P  S  V  S  H  H  N  V  N  A  E  Q  N  H  I  Q  G  L  P  S  G  A  S  H  Q  N  T  Q  W  S  D  D  H  T  T  K  I  S  E  V  H  R  E  P  Q  H  L  S  T  D  E  E  W  P  L  I  E  P  P  S  V  A  S  Q  T  S  I  S  E  P  P  A  D  S  E  L  H  P  D  P  T  N  M  S  Y  D  R  I  N  H  Q  N  E  I  D  E  V  Q  G  T  D  N  C  T  I  E  N  L  G  S  P  S  S  R  R  L  Q  E  D  N  A  G  G  A  S  I  Y  E  N  D  L  Y  G  Y  Q  N  Q  N  H  T  F  D  H  Q  Q   : A  E  D  V  N  N  S  V  S  S  V  S  A  N  L  Q  Q  L  N  V  Q  D  D  G  G  V  P  P  E  G  D  G  P  S  V  V  I  P  D  H  L  Q  V  Q  T  A  D  C  S  H  L  S  F  G  S  F  G  S  G  I  G  G  S  F  S  G  P  L  A  S  A  P  V  T  S  T  L  E  D  A  P  K  E  V  D  G  S  S  V  G  H  L  G  S  R :   A  S  E  Y  Y  G  D  E  S  L  R  H  A  S  E  S  N  L  Y  H  R  T  N  A  S  S  V  N  Y  D  S  P  A  S  Q  P  E  P  L  K  S  E  T  N  E  Q  G  N  Q  Y  S  Y  P  S  S  A  A  G  Y  T  Y  E  S  A  Q  Q  L  T  A  A  F  S  Q  P  Q  T  S  S  Q  M  Q  N  L  T  P  F  S  N  V  M  :  A  F  T  N  S  L  P  S  T  L  L  A  A  N  A  H  A  G  R  E  T  D  L  S  Y  L  P  F  S  A  T  Q  A  M  A  M  K  Y  G  S  S  V  S  S  I  G  G  S  T  I  S  M  P  E  :  S  L  K  G  A  G  F  P  S  A  Q  P  T  Q  Q  P  L  S  G  T  S  V  T  T  G  P  T  V  P  Q  H  L  A  V  H  P  Y  N  Q  P  P  L  G  P  F  A  N  M  I  G  Y  P  F  L  P  Q  S  Y  T  Y  M  P  S  A  F  Q  Q  P  F  A  G  N  S  N  Y  H  Q  S  L  A  A  V  L  P  Q  Y  K  N  S  V  S  V  S  S  L  P  Q  P  A  S  V  A  S  A  Y  G  G  F  G  N  T  A  S  I  P  G  N  F  P  M  N  P  P  A  A  P  S  G  T  N  L  S  Y  D  D  V  L  S  S  Q  Y  K  D  T  N  H  L  M  S  L  Q  Q  :  S  E  N  S  A  M  W  H  G  P  G  S  R  T  M  S  A  V  P  A  N  T  Y  Y  G  F  Q  G  Q  N  Q  Q  S  S  G  F  R  Q  A  Q  Q  P  L  Q  N  H  G  S  L  G  Y  P  N  F  Y  H  S  Q  A  G  I  S  L  E  H  Q  Q  Q  N  P  R  D  G  S  L  G  G  G  S  Q  G  Q  P  K  Q  F  Q  Q  L  W  Q  S  G  G  Y  *  S  L  T  A  S  F  F  F  G  V  L  *  *  V  *  K  W  L  *  G  V  A  L  E  A  T  R  M  H  N  Q  L  D  A  Y  L  C  L  K  V  V  L  Y  M  F  V  I  S  Q  M  *  R  R  M  *  A  N  V  V  L  V  D  L  S  S  V  S  S  T  L  C  Y  T  V  N  P  M  V  S  L  L  I  V  R  S  V  L  S  P  L  E  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="111832" stop="112114"/>
                    <exon start="112975" stop="113018"/>
                    <exon start="113506" stop="113605"/>
                    <exon start="113718" stop="113829"/>
                    <exon start="114419" stop="115032"/>
                    <exon start="116099" stop="116381"/>
                    <exon start="117069" stop="117339"/>
                    <exon start="117752" stop="117913"/>
                    <exon start="118803" stop="119258"/>
                    <exon start="119526" stop="119813"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>2610</number_coding_nucleotides>
                  <number_encoded_amino_acids>870</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TQKTLNYNRSETRKYFVGLSCFFPLFFFREKELSSSKMSSRNNGGVGVQSIPAGSRKMVQSLKEIVNCPEPEIYAMLKECNMDPNEAVNRLLTQDTFHEVKSKREKRKESKDTTESRPRGAISNSGRGSRGGAERYVGRGGSAESTKLIPGYRKDNGSKTSNLTSTLGVSGISRRATTISDIAANESKKSAPAAVDGVSSVSQHETSSGYQPTWGGVPGQVSMADIVKMGRPQSKVPSAPSVSHHNVNAEQNHIQGLPSGASHQNTQWSDDHTTKISEVHREPQHLSTDEEWPLIEPPSVASQTSISEPPADSELHPDPTNMSYDRINHQNEIDEVQGTDNCTIENLGSPSSRRLQEDNAGGASIYENDLYGYQNQNHTFDHQQAEDVNNSVSSVSANLQQLNVQDDGGVPPEGDGPSVVIPDHLQVQTADCSHLSFGSFGSGIGGSFSGPLASAPVTSTLEDAPKEVDGSSVGHLGSRASEYYGDESLRHASESNLYHRTNASSVNYDSPASQPEPLKSETNEQGNQYSYPSSAAGYTYESAQQLTAAFSQPQTSSQMQNLTPFSNVMAFTNSLPSTLLAANAHAGRETDLSYLPFSATQAMAMKYGSSVSSIGGSTISMPESLKGAGFPSAQPTQQPLSGTSVTTGPTVPQHLAVHPYNQPPLGPFANMIGYPFLPQSYTYMPSAFQQPFAGNSNYHQSLAAVLPQYKNSVSVSSLPQPASVASAYGGFGNTASIPGNFPMNPPAAPSGTNLSYDDVLSSQYKDTNHLMSLQQSENSAMWHGPGSRTMSAVPANTYYGFQGQNQQSSGFRQAQQPLQNHGSLGYPNFYHSQAGISLEHQQQNPRDGSLGGGSQGQPKQFQQLWQSGGY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="125014" PGL_stop="120827"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="125014" e_stop="124907"/>
            <exon e_start="123875" e_stop="123716"/>
            <exon e_start="123205" e_stop="123058"/>
            <exon e_start="122962" e_stop="122885"/>
            <exon e_start="121225" e_stop="121141"/>
            <exon e_start="121008" e_stop="120827"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.912" e_score="0.991"/>
          <exon-intron don_prob="1.000" acc_prob="0.777" e_score="1.000"/>
          <exon-intron don_prob="0.872" acc_prob="0.968" e_score="0.993"/>
          <exon-intron don_prob="0.995" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="125014" e_stop="124907" e_length="108"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.912">
            <gDNA_intron_boundary i_start="124906" i_stop="123876" i_length="1031"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="123875" e_stop="123716" e_length="160"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.777">
            <gDNA_intron_boundary i_start="123715" i_stop="123206" i_length="510"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="123205" e_stop="123058" e_length="148"/>
          </exon>
          <intron i_serial="3" don_prob="0.872" acc_prob="0.968">
            <gDNA_intron_boundary i_start="123057" i_stop="122963" i_length="95"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="122962" e_stop="122885" e_length="78"/>
          </exon>
          <intron i_serial="4" don_prob="0.995" acc_prob="0.993">
            <gDNA_intron_boundary i_start="122884" i_stop="121226" i_length="1659"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="121225" e_stop="121141" e_length="85"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.994">
            <gDNA_intron_boundary i_start="121140" i_stop="121009" i_length="132"/>
          </intron>
          <exon e_serial="6" e_score="0.989">
            <gDNA_exon_boundary e_start="121008" e_stop="120827" e_length="182"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125014" stop="124907"/>
              <exon start="123875" stop="123716"/>
              <exon start="123205" stop="123058"/>
              <exon start="122962" stop="122885"/>
              <exon start="121225" stop="121141"/>
              <exon start="121008" stop="120829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745116" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125003" stop="124907"/>
              <exon start="123875" stop="123716"/>
              <exon start="123205" stop="123058"/>
              <exon start="122962" stop="122885"/>
              <exon start="121225" stop="121141"/>
              <exon start="121008" stop="120989"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290057" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="124948" stop="124907"/>
              <exon start="123875" stop="123716"/>
              <exon start="123205" stop="123058"/>
              <exon start="122962" stop="122885"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335828" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="123101" stop="123058"/>
              <exon start="122962" stop="122885"/>
              <exon start="121225" stop="121141"/>
              <exon start="121008" stop="120827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215828" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="123091" stop="123058"/>
              <exon start="122962" stop="122885"/>
              <exon start="121225" stop="121141"/>
              <exon start="121008" stop="120827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215712" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TACGGACCCAGCAAATAGGCTCTTCTCCTCCCTTCTCTACGGCGTGCAATTCTGGTGTGTCCGTAGGTCGTGCGATCCGCCATTTTCAACCTCAATTCACCAACAATG : GAGATCTGCCCTTCAATTAAGAACATTCTGCTTCTAGATTCCGAAGGAAAGCGTGTTGCTGTAAACTACTACTCAGATGATTGGCCAACAAATGCTGCAAAGGAAGCTTTTGAGAAGGCCGTGTTTGCCAAGACTCAAAAGACAAATGCTAGGGCAGAAG : CGGAGATTACAATGTTTGATAATTATATTGTTGTCTACAAGTTTGCTCAAGATCTTCATTTCTTTGTTACTGGGAGTGACAATGAAAATGAAATAATCCTTGCCAGTGTTCTCCAAGGATTCTTTGATGCTGTTGGTATTCTTCTTAG : GGGCAATGTAGAAAAGAAGGAGGCACTTGAAAATTTGGACCTTATTCTTTTGTGTCTGGATGAAATTGTTGATGGCGG : AATCGTTCTTGAAACGGATGCTAATGTTATTGCTGGGAAAGTGGCAAGCAACAGCGTTGATTCTGGGGCACCTTTGTCGGAGCAG : ACTATAAGTCAAGCATTGGCAACTGCACGAGAACACTTGGCAAGATCTCTTCTCAAATGATTTGTTGGGTCTACAAAAGAAAGGGAAAACAGGTCTTGCAAGTACTGATTTTCTTTCCTTCTGAATGAACTAATTGATGAGCATCAGTTTACATGTGTTTTGGCAAAAAACAAAAAAAAAAT</gDNA_template>
            <first_frame> Y  G  P  S  K  *  A  L  L  L  P  S  L  R  R  A  I  L  V  C  P  *  V  V  R  S  A  I  F  N  L  N  S  P  T  M  :  E  I  C  P  S  I  K  N  I  L  L  L  D  S  E  G  K  R  V  A  V  N  Y  Y  S  D  D  W  P  T  N  A  A  K  E  A  F  E  K  A  V  F  A  K  T  Q  K  T  N  A  R  A  E   : A  E  I  T  M  F  D  N  Y  I  V  V  Y  K  F  A  Q  D  L  H  F  F  V  T  G  S  D  N  E  N  E  I  I  L  A  S  V  L  Q  G  F  F  D  A  V  G  I  L  L  R :   G  N  V  E  K  K  E  A  L  E  N  L  D  L  I  L  L  C  L  D  E  I  V  D  G  G :   I  V  L  E  T  D  A  N  V  I  A  G  K  V  A  S  N  S  V  D  S  G  A  P  L  S  E  Q  :  T  I  S  Q  A  L  A  T  A  R  E  H  L  A  R  S  L  L  K  *  F  V  G  S  T  K  E  R  E  N  R  S  C  K  Y  *  F  S  F  L  L  N  E  L  I  D  E  H  Q  F  T  C  V  L  A  K  N  K  K  K   </first_frame>
            <second_frame>  T  D  P  A  N  R  L  F  S  S  L  L  Y  G  V  Q  F  W  C  V  R  R  S  C  D  P  P  F  S  T  S  I  H  Q  Q  W :   R  S  A  L  Q  L  R  T  F  C  F  *  I  P  K  E  S  V  L  L  *  T  T  T  Q  M  I  G  Q  Q  M  L  Q  R  K  L  L  R  R  P  C  L  P  R  L  K  R  Q  M  L  G  Q  K  :  R  R  L  Q  C  L  I  I  I  L  L  S  T  S  L  L  K  I  F  I  S  L  L  L  G  V  T  M  K  M  K  *  S  L  P  V  F  S  K  D  S  L  M  L  L  V  F  F  L   : G  A  M  *  K  R  R  R  H  L  K  I  W  T  L  F  F  C  V  W  M  K  L  L  M  A   : E  S  F  L  K  R  M  L  M  L  L  L  G  K  W  Q  A  T  A  L  I  L  G  H  L  C  R  S  R :   L  *  V  K  H  W  Q  L  H  E  N  T  W  Q  D  L  F  S  N  D  L  L  G  L  Q  K  K  G  K  T  G  L  A  S  T  D  F  L  S  F  *  M  N  *  L  M  S  I  S  L  H  V  F  W  Q  K  T  K  K  K  </second_frame>
            <third_frame>   R  T  Q  Q  I  G  S  S  P  P  F  S  T  A  C  N  S  G  V  S  V  G  R  A  I  R  H  F  Q  P  Q  F  T  N  N   : G  D  L  P  F  N  *  E  H  S  A  S  R  F  R  R  K  A  C  C  C  K  L  L  L  R  *  L  A  N  K  C  C  K  G  S  F  *  E  G  R  V  C  Q  D  S  K  D  K  C  *  G  R  S :   G  D  Y  N  V  *  *  L  Y  C  C  L  Q  V  C  S  R  S  S  F  L  C  Y  W  E  *  Q  *  K  *  N  N  P  C  Q  C  S  P  R  I  L  *  C  C  W  Y  S  S  *  :  G  Q  C  R  K  E  G  G  T  *  K  F  G  P  Y  S  F  V  S  G  *  N  C  *  W  R  :  N  R  S  *  N  G  C  *  C  Y  C  W  E  S  G  K  Q  Q  R  *  F  W  G  T  F  V  G  A   : D  Y  K  S  S  I  G  N  C  T  R  T  L  G  K  I  S  S  Q  M  I  C  W  V  Y  K  R  K  G  K  Q  V  L  Q  V  L  I  F  F  P  S  E  *  T  N  *  *  A  S  V  Y  M  C  F  G  K  K  Q  K  K  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="124948" stop="124907"/>
                    <exon start="123875" stop="123716"/>
                    <exon start="123205" stop="123058"/>
                    <exon start="122962" stop="122885"/>
                    <exon start="121225" stop="121141"/>
                    <exon start="121008" stop="120949"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>570</number_coding_nucleotides>
                  <number_encoded_amino_acids>190</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VVRSAIFNLNSPTMEICPSIKNILLLDSEGKRVAVNYYSDDWPTNAAKEAFEKAVFAKTQKTNARAEAEITMFDNYIVVYKFAQDLHFFVTGSDNENEIILASVLQGFFDAVGILLRGNVEKKEALENLDLILLCLDEIVDGGIVLETDANVIAGKVASNSVDSGAPLSEQTISQALATAREHLARSLLK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="129021" PGL_stop="126029"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="129021" e_stop="128182"/>
            <exon e_start="126378" e_stop="126029"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.985" acc_prob="0.999" e_score="0.991"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="129021" e_stop="128182" e_length="840"/>
          </exon>
          <intron i_serial="1" don_prob="0.985" acc_prob="0.999">
            <gDNA_intron_boundary i_start="128181" i_stop="126379" i_length="1803"/>
          </intron>
          <exon e_serial="2" e_score="0.989">
            <gDNA_exon_boundary e_start="126378" e_stop="126029" e_length="350"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129021" stop="128343"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544272" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129020" stop="128454"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307444" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="128507" stop="128182"/>
              <exon start="126378" stop="126029"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544271" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTGATTTGCTTCATCAGTATATGAGCTACACACCCTTTAGTCTTTGCCCCTCAGATTCTTCAGTAGCTGAGTCTCTTATTCTTAGAGGGTGTCACCCTCTACCTAGGAGGCGCTGTTTTTCAAGAACCCCTTCTAGTATCCCCGCTTCTTTGCCTAAAACCCCTTTTTCTACTATCCCTGAAAAGGCCTTGTTGTGGAATAATTACACTTGTAAGAGCTTTTCTTGTTTGTCTCAGTCTAATCCCAACTTGGGATTTGATATGAAAGTTGAGCAATCAAGATTCTTGGATTTTAAGTCAGATCTAGATCTCCCAATTCCACAGTTTCTTCAGCTAACTAAGACCTCAAAGAGTGTTATTAGGCTGGCACTCGATATTGGGGGTGGTACAGGAACTTTTGCTGCACAAATGAAGCTGCATAATGTGACTGTTGTGACAACAACAATGAATCTTGGTGCCCCTTATAGTGAGACTGTGGCACTTAGGGGATTGGTGCCTTTACATGTACCTTTGCAGCAGAGGCTGCCAGTGTTTGATGGGGTGCTGGATCTTGTAAGATGTGGTCATGCTGTGAATAGGTGGATTCCAGTGACCATGATGGAGTTCTTGCTTTTTGATGTTGATAGAGTGTTGAGGGCTGGTGGATACCTCTGGTTGGACCATTTCTTTAGTAAAAGAGCAGATCTTGAGAAGGTTTTTCAACCCTTGATCTGGAAATTGAACTACAAGAAGGTGAAGTGGACAGTGGCTAATAAGAATGATGCTAGTGGTGTGAAGAATGGGGAAGTTTATTTGACAGCTCTTCTTCAGAAGCCGCTTTCGAGATGAACATCTAGTCCAG : ATACCACTGCTAGATTTGAATGATCATTTGATGCCAAATGCTGCTATGTTGTGTCAAGATATTCTCTTCTTCTCGAGGTAGAGAAATGCGATTAGTCTGCATTTGGAGCGAGAATGATCCAAACAATAGAAAGCTGTGTGCACCACAGAAATACAGTTTGCAGCAAACAACAGTAGCTGCTCTAATAGATAGCTATTTCCTTTCATTCATTTGTCAGTTTTGGTGTAATCTTTACTGATTTCGAAACTAAACAATAGTAGAGATAACAGAACTGCAAGTTTAAAAGTGATTATTATAAATGTAAAGATATTGCAGGAAAGTGAAAAAGAACTTGCTGAGTTCTTTGCTTC</gDNA_template>
            <first_frame> L  I  C  F  I  S  I  *  A  T  H  P  L  V  F  A  P  Q  I  L  Q  *  L  S  L  L  F  L  E  G  V  T  L  Y  L  G  G  A  V  F  Q  E  P  L  L  V  S  P  L  L  C  L  K  P  L  F  L  L  S  L  K  R  P  C  C  G  I  I  T  L  V  R  A  F  L  V  C  L  S  L  I  P  T  W  D  L  I  *  K  L  S  N  Q  D  S  W  I  L  S  Q  I  *  I  S  Q  F  H  S  F  F  S  *  L  R  P  Q  R  V  L  L  G  W  H  S  I  L  G  V  V  Q  E  L  L  L  H  K  *  S  C  I  M  *  L  L  *  Q  Q  Q  *  I  L  V  P  L  I  V  R  L  W  H  L  G  D  W  C  L  Y  M  Y  L  C  S  R  G  C  Q  C  L  M  G  C  W  I  L  *  D  V  V  M  L  *  I  G  G  F  Q  *  P  *  W  S  S  C  F  L  M  L  I  E  C  *  G  L  V  D  T  S  G  W  T  I  S  L  V  K  E  Q  I  L  R  R  F  F  N  P  *  S  G  N  *  T  T  R  R  *  S  G  Q  W  L  I  R  M  M  L  V  V  *  R  M  G  K  F  I  *  Q  L  F  F  R  S  R  F  R  D  E  H  L  V  Q  :  I  P  L  L  D  L  N  D  H  L  M  P  N  A  A  M  L  C  Q  D  I  L  F  F  S  R  *  R  N  A  I  S  L  H  L  E  R  E  *  S  K  Q  *  K  A  V  C  T  T  E  I  Q  F  A  A  N  N  S  S  C  S  N  R  *  L  F  P  F  I  H  L  S  V  L  V  *  S  L  L  I  S  K  L  N  N  S  R  D  N  R  T  A  S  L  K  V  I  I  I  N  V  K  I  L  Q  E  S  E  K  E  L  A  E  F  F  A   </first_frame>
            <second_frame>  *  F  A  S  S  V  Y  E  L  H  T  L  *  S  L  P  L  R  F  F  S  S  *  V  S  Y  S  *  R  V  S  P  S  T  *  E  A  L  F  F  K  N  P  F  *  Y  P  R  F  F  A  *  N  P  F  F  Y  Y  P  *  K  G  L  V  V  E  *  L  H  L  *  E  L  F  L  F  V  S  V  *  S  Q  L  G  I  *  Y  E  S  *  A  I  K  I  L  G  F  *  V  R  S  R  S  P  N  S  T  V  S  S  A  N  *  D  L  K  E  C  Y  *  A  G  T  R  Y  W  G  W  Y  R  N  F  C  C  T  N  E  A  A  *  C  D  C  C  D  N  N  N  E  S  W  C  P  L  *  *  D  C  G  T  *  G  I  G  A  F  T  C  T  F  A  A  E  A  A  S  V  *  W  G  A  G  S  C  K  M  W  S  C  C  E  *  V  D  S  S  D  H  D  G  V  L  A  F  *  C  *  *  S  V  E  G  W  W  I  P  L  V  G  P  F  L  *  *  K  S  R  S  *  E  G  F  S  T  L  D  L  E  I  E  L  Q  E  G  E  V  D  S  G  *  *  E  *  C  *  W  C  E  E  W  G  S  L  F  D  S  S  S  S  E  A  A  F  E  M  N  I  *  S  R :   Y  H  C  *  I  *  M  I  I  *  C  Q  M  L  L  C  C  V  K  I  F  S  S  S  R  G  R  E  M  R  L  V  C  I  W  S  E  N  D  P  N  N  R  K  L  C  A  P  Q  K  Y  S  L  Q  Q  T  T  V  A  A  L  I  D  S  Y  F  L  S  F  I  C  Q  F  W  C  N  L  Y  *  F  R  N  *  T  I  V  E  I  T  E  L  Q  V  *  K  *  L  L  *  M  *  R  Y  C  R  K  V  K  K  N  L  L  S  S  L  L  </second_frame>
            <third_frame>   D  L  L  H  Q  Y  M  S  Y  T  P  F  S  L  C  P  S  D  S  S  V  A  E  S  L  I  L  R  G  C  H  P  L  P  R  R  R  C  F  S  R  T  P  S  S  I  P  A  S  L  P  K  T  P  F  S  T  I  P  E  K  A  L  L  W  N  N  Y  T  C  K  S  F  S  C  L  S  Q  S  N  P  N  L  G  F  D  M  K  V  E  Q  S  R  F  L  D  F  K  S  D  L  D  L  P  I  P  Q  F  L  Q  L  T  K  T  S  K  S  V  I  R  L  A  L  D  I  G  G  G  T  G  T  F  A  A  Q  M  K  L  H  N  V  T  V  V  T  T  T  M  N  L  G  A  P  Y  S  E  T  V  A  L  R  G  L  V  P  L  H  V  P  L  Q  Q  R  L  P  V  F  D  G  V  L  D  L  V  R  C  G  H  A  V  N  R  W  I  P  V  T  M  M  E  F  L  L  F  D  V  D  R  V  L  R  A  G  G  Y  L  W  L  D  H  F  F  S  K  R  A  D  L  E  K  V  F  Q  P  L  I  W  K  L  N  Y  K  K  V  K  W  T  V  A  N  K  N  D  A  S  G  V  K  N  G  E  V  Y  L  T  A  L  L  Q  K  P  L  S  R  *  T  S  S  P   : D  T  T  A  R  F  E  *  S  F  D  A  K  C  C  Y  V  V  S  R  Y  S  L  L  L  E  V  E  K  C  D  *  S  A  F  G  A  R  M  I  Q  T  I  E  S  C  V  H  H  R  N  T  V  C  S  K  Q  Q  *  L  L  *  *  I  A  I  S  F  H  S  F  V  S  F  G  V  I  F  T  D  F  E  T  K  Q  *  *  R  *  Q  N  C  K  F  K  S  D  Y  Y  K  C  K  D  I  A  G  K  *  K  R  T  C  *  V  L  C  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="129019" stop="128195"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>822</number_coding_nucleotides>
                  <number_encoded_amino_acids>274</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DLLHQYMSYTPFSLCPSDSSVAESLILRGCHPLPRRRCFSRTPSSIPASLPKTPFSTIPEKALLWNNYTCKSFSCLSQSNPNLGFDMKVEQSRFLDFKSDLDLPIPQFLQLTKTSKSVIRLALDIGGGTGTFAAQMKLHNVTVVTTTMNLGAPYSETVALRGLVPLHVPLQQRLPVFDGVLDLVRCGHAVNRWIPVTMMEFLLFDVDRVLRAGGYLWLDHFFSKRADLEKVFQPLIWKLNYKKVKWTVANKNDASGVKNGEVYLTALLQKPLSR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="126347" stop="126141"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CQMLLCCVKIFSSSRGREMRLVCIWSENDPNNRKLCAPQKYSLQQTTVAALIDSYFLSFICQFWCNLY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 103 chains have been computed
$ 
$ memory statistics:
$ 171832 bytes spliced alignments in total
$ 81 spliced alignments have been stored
$ 2121 bytes was the average size of a spliced alignment
$ 24328 bytes predicted gene locations in total
$ 14 predicted gene locations have been stored
$ 1737 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 113 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-27 19:47:01
-->
