<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 09:02:01"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0072A04-Nv8Bc/GenomeThreader_SGN_markers/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0072A04-Nv8Bc/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072A04-Nv8Bc/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="C2_At5g46420" ref_strand="+" ref_description="C2_At5g46420">
      <seq>tttctttctttcttgggtgttatcagaaaacatgcaaggctcctctgctctttcctgttcttcaaattctatctctgctccagttggtctctgctgttctcaaagactaacacttccttttcgaaatcaaagaattgggtgtttggaaaatccatcaagcttgaagattttccattttcaccgaaacactaccttccctttgctgaactgcactgctaccgaagagatcgtggaggctagtgagacagaggaattatttgttgaaactgggtacatatatagtgttcatgggcttcaaggagaggttcgagtaaaagtaacaactgatttccctgaattgcgattttcccagccaggaagacgatggttgaggcagcaagttacagggagagatatgattcaagaaatcgaactagtggagggaagaggtcatccaggacagaagagttggatacttaaattccacgagattagcacaatagagcaggctcaaaaacttgtggggtcggccttactggtgaaggatgaagatagaccaatcctggaggaaggtgaattttacacccctgaccttgttgggatgaaagtatttctaaaggaaactagagaactggtaggaactgttattaatgttttcaacagtggagctagtgatctcctacatgttgagcttctaccggatcgaaatgcaagaccacagttggaaggaagtgcatctggtcctcttgtatgggtccctttcgttgaagcaattgttccaaatattgatttgagtaaaagggaaatgctgattacacctccaaagggtcttttagaattaaacatccgtgcagatgagaggtccaagaaagagaggcgacagcttgaatggaaagagagaaaaaagtctcagaaacgcctcatagcagccaagaaaatattgcatgaaatggaacaagatcatatatttcatggtttcagatatggagagaaaaaccaaaggagcttccttgcaaatcagatagttgatgtaaattccatcttgcttcagcatgccttgcagaataaaaagattccatataagagatggagctttccagactttgttaatgctttacaagtaaacaatacattaaaactatccaaagaattcttctctaaagaaaatgttgaacactcaagcattggttctaaagttcaagagcagggtcattgcctcatatcttctggcaaggttgcgattgttttagctttgacagaaagcaagcttcttggaatgtcttctattcctgaacctgctgggcctcatgaggagattgcttatctgcacgtcaaggcattgctaaatgacagccacagattgctcaagatggaggaccggccctctgtacctcttatagtggtgtgtcctgctgaatctattgaatatctcaaacaattgttcatggatcatgactacttctctttcgactctgagaaggtttggttcttggaagaagagaagctccctgttgtcagtgcttcacaggaagaagaaaacaaacataaaattttaatgaaatcaccatgggagatactccaaagaccagctggatctgcaggaattgttactttgctctcatcacagaacctactagagcatttacatgtgatgggcgtggagtatattcaggtatgttctggcaatcaagaattcataaatggggagatgctacttggttttactaagtctcgtgaagccaatgcggggatccaagtcttcagggatgctggctacttggaagaacacttcaacatagtattttccattgattttgcaaagaaattgactaagaagatagacaaacttcaatttgaagccattttaaagccaaatcagtatgtggagatggtagaaaaagaatgggttgatgtcatcccctcctcacccaactcgtatgagtttcattcatcgatttatagctgcttgaacgcttgtcctcctagtaaggtttgtctggtagacattactgcatgatatcgatatcttcatacatgtatatgactccaacttagcctcaaaagcatagaagatgttttaataacacaagtatctttgttcttaatatcacacacttcttctttttttcttctgtttccgtaaagtttcaacttcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072A04-Nv8Bc/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0072A04.2" temp_strand="+" temp_description="C02HBa0072A04.2  AC215375.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0072A04 sequenced_by:kribb upload_account_name:korea">
        <position start="8545" stop="18996"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8845" g_stop="9059" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="215" r_length="215" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9060" i_stop="10853" i_length="1794">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.880" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10854" g_stop="10990" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="352" r_length="137" r_score="0.956"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10991" i_stop="11081" i_length="91">
            <donor d_prob="0.017" d_score="0.96"/>
            <acceptor a_prob="0.922" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11082" g_stop="11216" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="487" r_length="135" r_score="0.978"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11217" i_stop="11629" i_length="413">
            <donor d_prob="0.584" d_score="0.96"/>
            <acceptor a_prob="0.943" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11630" g_stop="11740" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="488" r_stop="598" r_length="111" r_score="0.982"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="11741" i_stop="11850" i_length="110">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.880" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="11851" g_stop="12117" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="599" r_stop="865" r_length="267" r_score="0.989"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="12118" i_stop="14143" i_length="2026">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="14144" g_stop="14343" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="866" r_stop="1065" r_length="200" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="14344" i_stop="14972" i_length="629">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="14973" g_stop="15255" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="1066" r_stop="1348" r_length="283" r_score="0.972"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="15256" i_stop="15628" i_length="373">
            <donor d_prob="0.644" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="15629" g_stop="15739" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1349" r_stop="1459" r_length="111" r_score="0.991"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="15740" i_stop="16477" i_length="738">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="16478" g_stop="16669" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="1460" r_stop="1651" r_length="192" r_score="0.984"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="16670" i_stop="18226" i_length="1557">
            <donor d_prob="0.815" d_score="0.98"/>
            <acceptor a_prob="0.952" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="18227" g_stop="18715" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="1652" r_stop="2137" r_length="486" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072A04.2" gen_strand="+" ref_id="C2_At5g46420" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>2140</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072A04.2" gen_strand="+"/>
        <rDNA rDNA_id="C2_At5g46420" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8845" e_stop="9059"/>
          <exon e_start="10854" e_stop="10990"/>
          <exon e_start="11082" e_stop="11216"/>
          <exon e_start="11630" e_stop="11740"/>
          <exon e_start="11851" e_stop="12117"/>
          <exon e_start="14144" e_stop="14343"/>
          <exon e_start="14973" e_stop="15255"/>
          <exon e_start="15629" e_stop="15739"/>
          <exon e_start="16478" e_stop="16669"/>
          <exon e_start="18227" e_stop="18715"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTTCTTTCTTGGATGTTATCAGAAAACATGCAAGGCTCCTCTGCTCTTTCCTGTTCTTCAAATTCTATCTCTGCTCCAGTTGGTCTTTGTTGTTCTCAAAGATTAACACTTCCTTTTCGAAATCAAAGAATTGGGTTTCTGGAAAATCCATCAAGCTTGAAGATTTTCCATTTTCACCGAAACACTACCCTCCCTTTGCTGAACTGCACTGGTAAATCTTCTTTCCATTAAAGTTTTAATCTTTATTGATTTTTGAGTTTCCATAATGCTTACTTTGATTTTTTCTGACTTTTTCCGAACTGGGTTGTGTTTATTTTGGTAGTATCAGAAATTACTCACTTCCAAGTATATACTGTTTTCAACTGAATTCTGAAATATGTTCTCAAGATGTTATGCTTTGCTTTTGTGGATTTTATGTTCCTTTGAATTATCATTAGTATTATGTTCTGACGAAGTGGTGTCCCTTGTCCAGCCAGCTTGGCAAGATCCTCTTGGTCTGGTTTAGAGATTGTATGTCGATATAAAAATAAGCCCGTGGCTGTGAGATTTAGAGAGTCTGAATTTTTCAGAGAACCCCTAATTTGTTTTAAAGAAAAATTATTGAGTATTGGAGTGAAATGGGTCCAAATATGGGGTGAATGGATGTTGAGGGTTAATATAGTGGACCAAAATTAGTTTAGGATTAACAAGTAGTAGTAGTAGACGACTAGTTTTTGCTGCTGAATAACACGTCAACATACCCAGTGTAGTCCGGGGGGGGGGTCTGGAGTGGGTAGAGTGTACGTAGGCCTTACCCCTACCTCACGGAGGCCTCTGCTGAATACATGCTGCTTAGTATAAAAGTATAGGTACATAGTATGGGATTTGAGACTTATCATTGGACATGTCCTTCTCAGTTCAGCTTATTTCTACATTCCTCGACTTCGTTTTGTTTCTTTTTGTAAGTTTGTTCTGTGGTTTGTCTATTTGTTGGTTCTAGTTTTGAAGCAGGAGCATCTTCAGATAATTCTATCAAGTTAATTGTACTTAAAGTTAGTCATTACTTCACAGTTAGGCAAATTAAGTTAATGTTGGCAACACATTATCAGATTAATGTAAGGTAGATTTATCTAATATCAATTTCTTGGGTCAGATCTTTTGCTTTTTTTAGTTTGCTATTTATGTCTTGCGTAGAAGTAAAGCGTCTTGGCAACTCATATTATGCGGCTTTGTCCCACAGTGACACTTCTGGCTTCATACTTAATCTTGTAGTTGCACTCTGACAATTGCTTTAGAATCCATACCGAAGATCGAAAGTGAGAGCATCATTATTTAAGGCAAAAGATGCAAAAGTACAGTAGGAGATGAATATTTGTTCTTTTGGTAGGTTGGATATACATGAACGGTAACTCAAGACACATTTATGTTTCTTGCCTATCCCAAACAAGGTACAGTGACCACGACCCATCAGAAGACACTAGGTTTAATAGAAGTTTTGGAATTGAGCAAAACCTTGAATTTTGTGCTGTTATTTGCTGTTCTATTGACATTTCACTTGAGCTGTTTCCTTCAATGACACACCGGCTAATCATTACTTTTATCTTCTGCAAGTATATGTTGTATATTTGAGCTATCTTAAGTATCACATCTTGTGATTGTTGTCATTCTACACCCTTAAGCTTAAGCAAGTGTGAGGTAATCTTTGAATTTGTAAATTCTTACAAATTCCAGTTAAAAGTTTCCCGAATCAAGTTAATCACATAACATAGAAAAATCATGTATGATGTTCTTCCTGGAAAGATATCATCTCATAATAATGTACGCTTTCTACAAATTTGTTACTCATCATGATATACCAAGTCATGTGAATTAGTTATCAGTTACAGAACGCAGTGCTTAGACTGTCAAGCATCTTAATTATGCTAGAGTATCACAGTAGTTTTCATTCACTAGAAAGTTTTCTTTATAGTTTCTGCAAAGTCACTTGGTCCTCAAGTTAAGCACCTTTATTGTTTGTTCATTTCAGCTACGGAAGAGATCGTGGAGGCTAGTGAAACAGAGGGATTATTTGTTGAAACTGGGTACATATATAGTGTTCATGGGCTTCAAGGTGAGGTTCGAGTAAAAGCGACAACTGATTTCCCTGAATTGCGATTTTCCCAGGTAGAAAGCATCAGGAACTTAATAATGGGACTGGTTTCTCGTTTTTGGCCTTCATGAGAATATCCTTTTCATGAATTCACTCTTAATTTAGCCAGGAAGGCGATGGTTGAGGCAGCAAGTTACAGGGAGAGATATGATTCAAGAAATCGAACTAGTGGAGGGAAGAGGTCATCCAGGACAGAAGAGTTGGATACTTAAATTCCACGAGATTAACACAATTGAGCAGGTGATCTCCGTGTAATTATGCTGTACATTGGGTTTCCACAACCCACACTATTGTTTTTCCTCATATATTATGGAATGCAGTAAATATGTCTTTTGATTATAATGACCTTATCTTTCCTGTGTTAAATTAATTTTAAATCATGCATGTACAATCACAGTATTTCAATACAGCAAAGTGGCAGTGTCATGTAAGAAAGTTGGAAGAATTTTATATGACTTTACTACCGAATCGAAAATATTTGGTTCATCTTTTGTAAATAAAGGCAAATTTCACTCTGCCCATTAAATACGGAACCATTACTACAATTCTAATGCCAGTTTTATGTATCACCTGAGACATATTTTGGAAATGGACTTGATCTTTATCTTAGGGCATGGCCGTTTGATATATCTTGTTTTCTCGATTCTCCTCAGGCCCAAAAACTTGTGGGGTCGGCCTTACTGGTGAAGAATGAAGATAGACCAATCCTGGAGGAAGGTGAATTTTACACCCCTGACCTTGTTGGGATGAAAGTATTTCTAAAGGTTTGTTTCCACGGCTTCTGACTTTCATAAAAGGCACACAGTTCTTTAGTTTAATTTCTATTGGAGCTGAGTGGCACTTAAAAGGGATCTTCTATTTTTATGTGCTCCAGGAAACTAGAGAACTGGTAGGAACTGTTATTAATGTTTTCAACAGTGGAGCTAGTGATCTCCTACATGTTGAGCTTCTACCGAATCAAAATGCAAGACCACAGTTGGAAGGAAGTGCATCTGGTCCTCTTGTATGGGTCCCTTTCGTTGAAGCAATTGTTCCAAATATTGATTTGAGTAAAAGGGAAATGCTGATTACACCTCCAAAGGGTCTTTTAGAATTGAACATCCGTGCAGATGAGAGGTCCAAGAAAGAGAGGCGACAGCTTGTGAGTTGCTTTTCTTTTTTCTCCCATTTTGCCAGAATTTATCATATAGGTCACATGCTATTGCGGAGTGCTGTCAGTGTGGTTTCAGAAATCATAATTTCTTTTAAAAGAAATTTTATTTATCTTTGATTCTTTTCTAGAGAAGCAACACCTTGTGAGTTGATTTTGTTTGTGTTCACTTTTCTAGAATCAGAGTGCTGTCTCAATCATTTAAGAAGTCACTTTGCCATTTTCAAAGAAATTCTAGCTACTTTTTCTCAAGTACTCTGATTGGGTTTTTTCATATTCATTATTGGTTACAAGTTACTCTTGTGTGGTTTACTTTATAAATTTGACCAATCACAGACGTGCGTAAAGCAGTCAAGTTTAATTTTCTTCTTCTTGGCGCCTTCTCTAGTACTCCTTATGCTTCGTCTTGCTACACACCTCTTTCAGGGGTAGACCAGATACAATACCTTCAGTTTGGAAGTAATTAACCAAAAAATTATAGTTTTCCTTAGATTTTTGGTAAGGAATTATAGCTGCCCTCAAAACACATTTTGTTTCATCTCTTTCGGTATCTTCCTGGATTTTTGGCAGTATAGAAGCCTCCACTTTGTTCATCCCATTTGAATCTATTATCTTCACAGGGAAGTCCCTGAAAACTCCCATTTGTACTGTAAAATTCAGCAACTGTCACCAATTGCCAATCGTTGAAATGTCTTCTGAATCTGATGTTTCATATCTCATAGTCCCTGGATTCTGCTACAGTAGCTTCAGGGTACTGAATCAAGTTGAAAAAACAAAAGGAGTTGTATTTTTGGATGATTGTGGACTATCCATTTGTCATGACATAAGAGACTTTCCTTCCATTACTCCCGATGATGCTTGTTATTTGCAAAACTCAGACCACATCTTGCCAATAGGTGGTTTCTTATCTTAACCTATATGTGTTGTTTGCATCCTCTGCCAGGTGTAATCATTTCTAATCTTGCCCAACATCTTTTAAAGACAAATACATCTCAATGTTCACATTTCTATGACACTCATCCTATGAATAATTAGACCTTAGCAGCCTAACTTTTTTTTTTTTATCAAAGCCATGGAAACCCAACATTTACTCCAATATAACATTGCTGGCCTTACTGCCGTTAAATAATTTTTTTTAGGTACTTTGTAGTTGCACGGAAATCCACATCACTTATTCATTTCAGTCATCCTATATTTAATTTCTGTGTTATATCTTCATCTATCATGTCTTTTTTCTTTTAAGGCCAAGTTTAACGGGGTTTATCTTTATAGCTGCTTTACAGGTTTTTGGTCTGTTAGCTTCATGTTACTTTCATGTTTGAAGCAACTTTATTTTCTCTATAACCTTTGCTCCTTGATGCCTTTCTAATACAGTTTAGTCTTCACCAAAAAAAAAAATCTAAAAAGATTCTGCATTTAGGCACAACAATTACATCGAACCTCACTTTGCCTTCATTCTTACTATGGAGGCAAAACTTGCATATTAGTTCTACTTATCCTAAAACCCTTACTTAATGGAGTGTATTTCAATATTTTCAACTTTTTATTGATTCACTCCCTCATTTAATCAATTGACAATTATCTGCAAATAACAGTTCCCGTATAAAGTGAAGTTAGATGACTGTAGCCACTTGTTAGAAGATGGCGGTTGCGCCACCATATATTCACATCATTAATAGTTGTTAACTCCACAATGGTGAGATAAGAACAAGGTGAATTTGGTTTGTGCAGAAGGATAAATTCTTTAACATCTAAATAAATGGTTACCCACTTCTCCTCATAAGAATGTAGTGCAGTGATTATCATTAAATAGATGTCATAATTTTCTTATCCGAGCTCAATGACAAAGTAATTCTTGATGGAGAGTTCATACTTAGCTGTTCCAGATGAGTGCCGGTCATTAAGTAATGCCTCTAAAGTTGCTTTTCTCTCCGGTGCTCCTCTGTGATTGTCGTAGGTACTAAATCTATAGCATTGATCTAGTGTGTTTGGCCTACTTAACCTTCTTCTTTTTCAGGAATGGAAAGAGAGAAAAAAGTCTCAGAAACGCCTCATAGCAGCCAAGAAAATATTGCATGAAATGGAACAAGATCATATATTTCATGGTTTCAGATATGGAGAGAAAAACCAAAGGAGCTTCCTTGCAAATCAGATAGTTGATGTAAATTCCATCTTGCTTCAGCATGCCTTGCAGAATAAAAAGATTCCATATAAGAGGTGCAGATATTAGTTAATTTCCTGTCTTTTGTCATTATATACCCTTTTCTAATCCTGCGAAGTGTATGTCATACATGCTTTAAGTAGGCTAACCATTCTTTTACACTGACATCCCATATTCTAAATGTTTAGTAGAATGTCAAGGGAAAAAGCTAGGATTCTTTTTGAGACCCTATCTTTTCCACGGTTTGTGGTAACCGATGTATAACTAGAATCAAACAACCAAAGTGACCTACTTCTCCCCACCCTCATCCCCCCAAAAATGAAAGAAGAACGAAAGGAAGAAACAAAAACTATAGACACAAATTGACCTCTGCTTTGGATGATTATGTATTTCTAATTAATCTCCTGTGGTGACCTGTTAAAAATTGGTAGTGCTGAAAGATATATGGGAAGAGGTCCCAGTGAAGAGTTTTTTAGAAGACCACACAAAGCGAGAAATCTCCTCTTTTAATGCAAATTAGTTGTGGGCTTTAGGCTCAGTATACTGGTTGGATGCTGTCTAGGACTGGGTTCTTTTACCTGATATTGACTTTTATATATAACAGATTCTTATTTCTTTATTTTGGGAGTTGGTTGGAGAAATACTATCATTTGCCTTAAATTTTGAATTTTTTTCCTTGCGGCAGATGGAGCTTTCCAGACTTTGTTAATGCTTTACAAGTAAACAATACATTAAAACTATCCAAAGAATTCTTCTCTAAAGAAAATGTTGAACACTCAAGCATTGTTTCTAAAGTTCAAGAGCAGGGTCATTGCCTCATATCTTCTGGCAAGGTTGCGATTGTTTTAGCTTTGACAGAAACTAAGCTTCTTGGAACGTCTTTTATTCCTGAACCTGCTAAGCCTCATGAGGAGATTGCTTATCTGCACGTCAAGGGATTGCTAAATGACAGCCACAGATTGCTCAAGGTAGTCCTTCCTTCAGAAGTAGAACTAGAGATGGTATTGTGTTCTGTAAATTGAACTGCTATTTCCTATATGCCCATCAGGAGTGAAGTATATCTACCGTGTAGTTGTCACTTTATTCCCAGCAGCCAATTGCTTGAAAGTAGATTACACATGCATTATATTGTTATCAGATGATCCTGATAAAGTTTGGGACATGTAGATTATGAGTTTTTTCCTGGACTTGTATACATGCAAGTGTAATTCACATTCGAGCTGATTGACTAAAGGTCCATTTACTCTAGTTTTTGATGTTCTCGTGAAGAAGGGATATTACTTGTCTTGCTGGAGAGAATTACTCTTCATCATGTTTTGAAATTTTTCTTGTCAATTGCAGATGGAGGACCGGCCCTCTGTACCTCTTATAGTTGTGTGTCCTGCTGAATCTATTGAATATCTCAAACAATTGTTCATGGATCATGACTACTTCTCTTTCGACTCTGAGAAGGTTAGATGCATGTACTTTGGCTATGTAATTAGTTACGTGACAGTTAGGAAGCTTGGTCATAATGATCTATAAGGAATTTATTTCACATTCCTCCATCGTCTTCATTCCTTTAGGATAAATGTTACTAATACACAGACTTAGCTGAGAATTACTGTTAGCACTTTGATTGCCTCAATCTAATTCTGAAAGTATAGAGGAACCACTTGGTTGGTCTTTAACTGGAACTATATCACTCATTCAGTCATGCTTTAAAACAGATATAGGGACTCTAGTGTTATTGATGCTGCTAGACTTCATTAAAGTCATGTAGATGAACCTCAACTGTGAAAAATAAGTTATGCTATTGGCCTAATCGTGTTCCATATCCTTATTCTAGAAATCCCTACCCTGTGGCCTTGGCCAAATAATGCAATCCGCTGAGGGAAGTTCTATTGCATGCTTATAGCCAGTTCATCTAGATTTGAAACTATTATCTCTATGAAAAAGTGGACAAGTTCCTCCTATCAGGCATTCAAGCAACTTCCGGATATTGTTAATTTTGGTTGGTTGGACTAATTTCTGTGATAAGACTACTTACTTAACTACCGTCTATCTATGATTTTGTTTGCATTACTTTTTAATTGTTTTCTGTAAACTATGTCCATTTTCTCTTTCACAATTTTATCATCACTATTGACATGATAATAGGTCTAGCTGCATGCAGTTTCTTAGTTTTTACATCATTTGAATCATTCACAGGTTTGGTTCTTGGAAGAAGAGAAGCTCCCTGTTGTCAGTGCTTCACAGGAAGAAGAAAACAAACATAAAATTTTAATGAAATCACCATGGGAGATACTCCAAAGACCAGCTGGATCTGCAGGAATTGTTACTGTGCTTTCATCACAGAACCTACTAGAGCATTTACATGTGATGGGTGTGGAGTATATTCAGGTGAGAGTTCAGATATTGGCTAGGTGTTGACTTCTGCATTTGATTTCTGACTAACTGCAATTGGCGTGTTAAGTAGCATGTATACTCCTTTTTCTTGTCCTTATAGATCTGTCTTAAGTGTTAATTGTTAATTCGGCATGCATGTTGGTTGTACGCTTGAATTGCTTAGAACAATCTCCTTACTGATTCTGGAAAAGGGCTGCAAATATACACTCCTTATGTTCCTGTCTACTCTAGTCAATTGATGAAAGTGATAACACTTATTCTGAAATATTTTTCATCACCAGCAGTTGGATTGATGTATGCATGTGAAGTTTTCTATAAAACACATCTGTGTTGCCAGTGTTAAGAAACAATTCAAGCACCAGCCTTTATTTTTTTAATTTTCCTCTCTATCTCCTTTTTTTTGTGTGTGTTTGTGTGTTGGTGGTAGTTATTGCATTGACCTGGATTATTTTATAGAAGAGAGTTTTCTGAAGACGGTAATGGCAACTTAGAATATGTTCCCAACATCATTTACATAAAAAATGTGAACCAGTAGGATCTTCATCACTATTATAGGGAAATAGTGATTCATGTGTAACTTTAAAAAGTGTTTTTAGTTTAAAAGGTACATAGTTTATTTCTTTGAAAAATATCAACCGCTGAACAAGTGCTTAGAGCAGTTACCTTGTCCACTCACACATGTAATTTCGAATGTCATGTAAGAAAGCTAGCTCTTTACTTTATCGGGAAAAAGCTAGCTCTTTATGTCAGTGTTATAGATGGGAAATGCTTATGGAGATTTATTAGTATTTAGTTGTAAGGAGGGTGAGGAGAGTAGGGTGTGGAATTGCTGGATAGGATGGTTATGTTACCTATGCTAATGAATGCCATGCCTAACTGATTTAGTGATTGGACTAGTTAGTACTGTTATACACATTTGTTTGCAAAGAGGTTGGAAGTAATAAGATTAGGGTGGAACACTATGAATCTGCAAGTTATTGTACTAGACATTAGGGAGGAAGTAGCCGAAGGAAAGGTGAGAGTATGATGTCATGATATCCTTCATTTTGCTGCGAGTTTCTCCATGTATCGGTGTTCTCTATTTTTTGGAACTTAGGCTCTTTTCTTTAAACCTTGCTTTCAGTATAAAGGTGGGAATTATTGAATTCGTTAGATAATTCTGGTTCTAACAATCACCAGTTACTGTTCAGTCCTTTGGGGTTACTAGCTTCCTTGCTAAGTGTCATGTCTTGAGACAATGCTTCAAACTGGTCCAAATCAAGCATTATAATGGATCTAAAGAGGCTCATCCCCCATCTCCCATGCCCCAAGCACCAAAGAGGGAAACTAATAAGAGATGTTCAAAAACATAAATGTCAAAACTAAGAATGGATAGTAGAGTGAGACAGTAAAAGGATCTCAATTAAACCTATATCAGTCACTTGTTTTAATTGATGTTACTAGTGGTTTTGCATAATTGATGTTATTAGTGGTTTTGCACTTCAGCGAGTCCATATTACCAGTGGGTTTGCACTACTATGAAACCGTGTTAACAGTTGGTTTCCAATACAGGTATGTTCTGGCAATCAAGAATTCATTAATGGGGAGATGCTACTTGGTTTTACCAAGTCTCGTGAAGCCAATGCGGGGATCCAAGTCTTCAGGGATGTTGGCTACTTGGAAGAACACTTCAACATAGTATTTTCCATTGATTTTGCAAGGAAATTGACTAAGAAGATAGACAAACTTCAATTTGAAGCCATTTTAAAGCCAAATCAGTATGTGCAGATGGTAGAAAAAGAATGGGTTGATGTCATCCCCTCCTCACCCAGCTCGTATGAGTTCCATTCATCGATATATAGCTGCTTGAACTCTTGTCCTCCTAGTAAGGTTTGTCTGGTAGACATTACTGCATGATATTGATATCTGCATACATGTATATGACTCCAACTTAGCCTCAAAAGCATAGAAGATGTTATAATAACACCAGTATCTTTGTTCTTAATATCACACCCTTCTTTTCTTTTTCTTCTGTTTCCTTATTAATGTTTCAACTTCATT</genome_strand>
        <mrna_strand>TTTCTTTCTTTCTTGGGTGTTATCAGAAAACATGCAAGGCTCCTCTGCTCTTTCCTGTTCTTCAAATTCTATCTCTGCTCCAGTTGGTCTCTGCTGTTCTCAAAGACTAACACTTCCTTTTCGAAATCAAAGAATTGGGTGTTTGGAAAATCCATCAAGCTTGAAGATTTTCCATTTTCACCGAAACACTACCTTCCCTTTGCTGAACTGCACTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCGAAGAGATCGTGGAGGCTAGTGAGACAGAGGAATTATTTGTTGAAACTGGGTACATATATAGTGTTCATGGGCTTCAAGGAGAGGTTCGAGTAAAAGTAACAACTGATTTCCCTGAATTGCGATTTTCCCAG...........................................................................................CCAGGAAGACGATGGTTGAGGCAGCAAGTTACAGGGAGAGATATGATTCAAGAAATCGAACTAGTGGAGGGAAGAGGTCATCCAGGACAGAAGAGTTGGATACTTAAATTCCACGAGATTAGCACAATAGAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAAAACTTGTGGGGTCGGCCTTACTGGTGAAGGATGAAGATAGACCAATCCTGGAGGAAGGTGAATTTTACACCCCTGACCTTGTTGGGATGAAAGTATTTCTAAAG..............................................................................................................GAAACTAGAGAACTGGTAGGAACTGTTATTAATGTTTTCAACAGTGGAGCTAGTGATCTCCTACATGTTGAGCTTCTACCGGATCGAAATGCAAGACCACAGTTGGAAGGAAGTGCATCTGGTCCTCTTGTATGGGTCCCTTTCGTTGAAGCAATTGTTCCAAATATTGATTTGAGTAAAAGGGAAATGCTGATTACACCTCCAAAGGGTCTTTTAGAATTAAACATCCGTGCAGATGAGAGGTCCAAGAAAGAGAGGCGACAGCTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGGAAAGAGAGAAAAAAGTCTCAGAAACGCCTCATAGCAGCCAAGAAAATATTGCATGAAATGGAACAAGATCATATATTTCATGGTTTCAGATATGGAGAGAAAAACCAAAGGAGCTTCCTTGCAAATCAGATAGTTGATGTAAATTCCATCTTGCTTCAGCATGCCTTGCAGAATAAAAAGATTCCATATAAGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGCTTTCCAGACTTTGTTAATGCTTTACAAGTAAACAATACATTAAAACTATCCAAAGAATTCTTCTCTAAAGAAAATGTTGAACACTCAAGCATTGGTTCTAAAGTTCAAGAGCAGGGTCATTGCCTCATATCTTCTGGCAAGGTTGCGATTGTTTTAGCTTTGACAGAAAGCAAGCTTCTTGGAATGTCTTCTATTCCTGAACCTGCTGGGCCTCATGAGGAGATTGCTTATCTGCACGTCAAGGCATTGCTAAATGACAGCCACAGATTGCTCAAG.....................................................................................................................................................................................................................................................................................................................................................................................ATGGAGGACCGGCCCTCTGTACCTCTTATAGTGGTGTGTCCTGCTGAATCTATTGAATATCTCAAACAATTGTTCATGGATCATGACTACTTCTCTTTCGACTCTGAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGTTCTTGGAAGAAGAGAAGCTCCCTGTTGTCAGTGCTTCACAGGAAGAAGAAAACAAACATAAAATTTTAATGAAATCACCATGGGAGATACTCCAAAGACCAGCTGGATCTGCAGGAATTGTTACTTTGCTCTCATCACAGAACCTACTAGAGCATTTACATGTGATGGGCGTGGAGTATATTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGTTCTGGCAATCAAGAATTCATAAATGGGGAGATGCTACTTGGTTTTACTAAGTCTCGTGAAGCCAATGCGGGGATCCAAGTCTTCAGGGATGCTGGCTACTTGGAAGAACACTTCAACATAGTATTTTCCATTGATTTTGCAAAGAAATTGACTAAGAAGATAGACAAACTTCAATTTGAAGCCATTTTAAAGCCAAATCAGTATGTGGAGATGGTAGAAAAAGAATGGGTTGATGTCATCCCCTCCTCACCCAACTCGTATGAGTTTCATTCATCGATTTATAGCTGCTTGAACGCTTGTCCTCCTAGTAAGGTTTGTCTGGTAGACATTACTGCATGATATCGATATCTTCATACATGTATATGACTCCAACTTAGCCTCAAAAGCATAGAAGATGTTTTAATAACACAAGTATCTTTGTTCTTAATATCACACACTTCTTCTTTTTTTCTTCTGTTTCCGTA--AA-GTTTCAACTTCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072A04-Nv8Bc/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="TG451-R" ref_strand="+" ref_description="TG451-R">
      <seq>ctctttcggccagttctaagtttaaatgcttcttacaaccactaagcaaagctaaccatatagacaaatttggtctcatgggcatgcttttcaccaaatcctctgcttcatttaacttcccacttctgcaaaggatatctaccatacaactataatgctcaagtgtcacttcaatggatgagctttgggggatatattgaaataagcgtcttcctttctctagcatgccagaatggctacaagcagcaagtaacccagtaaatgtaatatcatccatatcagcccttgaacgaaccatctgggcgaacaatgtgagtgcccaattaccaaatccatgttgtgcacatccaacgatggttgagttccacgaaactgtgtttttttcagggatctccttgaatgcaatgagtccatcgtttatatttccacactttgaatacaatacaactagtgaattgccaacaaaggcatcagtgttcaatcccagtttgactgctacaccatgaatctctttgccaagatcaatagactccatttcacaggatgaatttagggcactagtgaaggaagattgattgggaagtagaccaatcctaatcatgtccccaaacactttcaatgcttctttgtgcttataattca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072A04-Nv8Bc/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0072A04.2" temp_strand="+" temp_description="C02HBa0072A04.2  AC215375.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0072A04 sequenced_by:kribb upload_account_name:korea">
        <position start="27982" stop="29223"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28282" g_stop="28923" g_length="642"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="642" r_length="642" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072A04.2" gen_strand="+" ref_id="TG451-R" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>642</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072A04.2" gen_strand="+"/>
        <rDNA rDNA_id="TG451-R" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28282" e_stop="28923"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTTCGGCCAGTTCTAAGTTTAAATGCTTCTTACAACCACTAAGCAAAGCTAACCATATTGACAAATTTGGTCTCATGGGCATGCTTTTCACCAAATCCTCTGCTTCATTTAACTTCCCACTTCTGCAAAGGATATCTACCATACAACTATAATGCTCAAGTGTCACTTCAATGGATGAGCTTTGGGGGATATATTGAAATAAGCGTCTTCCTTTCTCTAGCATGCCAGAATGGCTACAAGCAGCAAGTAACCCAGTAAATGTAATATCATCCATATCAGCCCTTGAACGAACCATCTGGGCGAATAATGTGAGTGCCCAATTACCAAATCCATGTTGTGCACATCCAACGATGGTTGAGTTCCACGAAACTGTGTTTTTTTCAGGGATCTCCTTGAATGCAATGAGTCCATCGTTTATATTTCCACATTTTGAATACAATACAACTAGTGAATTGCCAACAAAGGCATCAGTGTTCAATCCCAGTTTGACTGCTACACCATGAATCTCTTTGCCAAGATCAATAGACTCCATTTCACAGGATGAATTTAGGGCACTAGTGAAGGAAGATTGATTGGGAAGTAGACCAATCCTAATCATGTCCCCAAACACTTTCAATGCTTCTTTGTGCTTATAATTCA</genome_strand>
        <mrna_strand>CTCTTTCGGCCAGTTCTAAGTTTAAATGCTTCTTACAACCACTAAGCAAAGCTAACCATATAGACAAATTTGGTCTCATGGGCATGCTTTTCACCAAATCCTCTGCTTCATTTAACTTCCCACTTCTGCAAAGGATATCTACCATACAACTATAATGCTCAAGTGTCACTTCAATGGATGAGCTTTGGGGGATATATTGAAATAAGCGTCTTCCTTTCTCTAGCATGCCAGAATGGCTACAAGCAGCAAGTAACCCAGTAAATGTAATATCATCCATATCAGCCCTTGAACGAACCATCTGGGCGAACAATGTGAGTGCCCAATTACCAAATCCATGTTGTGCACATCCAACGATGGTTGAGTTCCACGAAACTGTGTTTTTTTCAGGGATCTCCTTGAATGCAATGAGTCCATCGTTTATATTTCCACACTTTGAATACAATACAACTAGTGAATTGCCAACAAAGGCATCAGTGTTCAATCCCAGTTTGACTGCTACACCATGAATCTCTTTGCCAAGATCAATAGACTCCATTTCACAGGATGAATTTAGGGCACTAGTGAAGGAAGATTGATTGGGAAGTAGACCAATCCTAATCATGTCCCCAAACACTTTCAATGCTTCTTTGTGCTTATAATTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072A04-Nv8Bc/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="TG451-F" ref_strand="+" ref_description="TG451-F">
      <seq>tatactgtttgacaaaatgcctgtcaaagatacggttatgtggaacttgatgattaaagggtgtgtagagtgtgggaatatggagatgggtttgaagctatttgaagaaatgacccaaagaaatgtagtttcgtacacaacgatgattagcgggtatttgaagtttggaaaggttgaagaggctgagagtttgttttcggagatgccacaaagggatgtggcagcttggaatgctatgctttatgggtattttgagaatggaagagttgaagaggctgttaagttgtttgagctaatgccttataggaatgtgatttcgtggacgtcggttattagtgggcttgatcagcatgggaggagtgatgaggctctattgattttcaagaagatggtaaatttctttattgaacctacttctagtacttttgcttctgttattacagcttgtgctaatgcaagggatttaggtctaggtagtgaaattcatgcctgtgttgtgaagcttggttatcagtatgatacttatgtcactgcttcactaatcacattgtatggtaattgcatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072A04-Nv8Bc/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0072A04.2" temp_strand="-" temp_description="C02HBa0072A04.2  AC215375.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0072A04 sequenced_by:kribb upload_account_name:korea">
        <position start="29869" stop="28708"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29574" g_stop="29008" g_length="567"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="566" r_length="566" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072A04.2" gen_strand="-" ref_id="TG451-F" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072A04.2" gen_strand="-"/>
        <rDNA rDNA_id="TG451-F" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29574" e_stop="29008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAGCTGTTTGACAAAATGCCTGTCAAAGATACGGTTATGTGGAACTTGATGATTAAAGGGTGTGTAGAGTGTGGGAATACGGAGATGGGTTTGAAGCTATTTGAAGAAATGACCCAAAGAAATGTAGTTTCGTACACAACGATGATTAGCGGGTATTTGAAGTTTGGAAAGGTTGAAGAGGCTGAGAGTTTGTTTTCGGAGATGCCACAAAGGGATGTGGCAGCTTGGAATGCTATGCTTTATGGGTATTTTGAGAATGGAAGAGTTGAAGAGGCTGTTAAGTTGTTTGAGCTAATGCCTTATAGGAATGTGATTTCGTGGACGTCGGTTATTAGTGGGCTTGATCAGCATGGGAGGAGTGATGAGGCTCTATTGATTTTCAAGAAGATGGTAAATTTCTTTATTGAACCTACTTCTAGTACTTTTGCTTCTGTTATTACAGCTTGTGCTAATGCAAGGGATTTAGGTCTAGGTAGTGAAATTCATGCCTGTGTTGTGAAGCTTGGTTATCAGTATGATACTTATGTCACTGCTTCACTAATCACATTGTATGCTAATTGCATGC</genome_strand>
        <mrna_strand>TATA-CTGTTTGACAAAATGCCTGTCAAAGATACGGTTATGTGGAACTTGATGATTAAAGGGTGTGTAGAGTGTGGGAATATGGAGATGGGTTTGAAGCTATTTGAAGAAATGACCCAAAGAAATGTAGTTTCGTACACAACGATGATTAGCGGGTATTTGAAGTTTGGAAAGGTTGAAGAGGCTGAGAGTTTGTTTTCGGAGATGCCACAAAGGGATGTGGCAGCTTGGAATGCTATGCTTTATGGGTATTTTGAGAATGGAAGAGTTGAAGAGGCTGTTAAGTTGTTTGAGCTAATGCCTTATAGGAATGTGATTTCGTGGACGTCGGTTATTAGTGGGCTTGATCAGCATGGGAGGAGTGATGAGGCTCTATTGATTTTCAAGAAGATGGTAAATTTCTTTATTGAACCTACTTCTAGTACTTTTGCTTCTGTTATTACAGCTTGTGCTAATGCAAGGGATTTAGGTCTAGGTAGTGAAATTCATGCCTGTGTTGTGAAGCTTGGTTATCAGTATGATACTTATGTCACTGCTTCACTAATCACATTGTATGGTAATTGCATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072A04-Nv8Bc/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="T1654" ref_strand="+" ref_description="T1654">
      <seq>aacataatcttcttagcctttacaacacaaaaaaagaaaaaaacttattcagttttcatcaaaaagaggtttcaagccttactatcattatcattttcaagaaccaagaatggctagtgagcagatgaaacctgttgcatctttgcttttggtccttaatttctgcatgtatgttgttgttttaggtattggtggttgggctatgaactttgccattgataatggttttgtcattggtccaggaatgaatcttccagcacatttctcaccaatttacttcccaattggaaatgctgccactggattctttgttgtatttgctttgatagcaggtgtggttggagttgcatctgttctctctggacttaaccacattcgccattggaacatcgatagcttaccatctgctgcttctgctgctacaatagcctggagtcttacagtccttgccatgggctttgcttggaaagaaattgaactcaactacaggaattccaaattgaaaacaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072A04-Nv8Bc/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0072A04.2" temp_strand="+" temp_description="C02HBa0072A04.2  AC215375.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0072A04 sequenced_by:kribb upload_account_name:korea">
        <position start="31929" stop="33390"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32229" g_stop="32464" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="236" r_length="236" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32465" i_stop="32683" i_length="219">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32684" g_stop="32903" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="456" r_length="220" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32904" i_stop="33036" i_length="133">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.930" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33037" g_stop="33082" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="502" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="33083" i_stop="33161" i_length="79">
            <donor d_prob="0.917" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33162" g_stop="33169" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="503" r_stop="510" r_length="8" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072A04.2" gen_strand="+" ref_id="T1654" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>510</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072A04.2" gen_strand="+"/>
        <rDNA rDNA_id="T1654" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32229" e_stop="32464"/>
          <exon e_start="32684" e_stop="32903"/>
          <exon e_start="33037" e_stop="33082"/>
          <exon e_start="33162" e_stop="33169"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACATAATCTTCTTAGCCTTTACAACACAAAAAAAGAAAAAAACTTATTCAGTTTTCATCAAAAAGAGGTTTCAAGCCTTACTATCATTATCATTTTCAAGAACCAAGAATGGCTAGTGAGCAGATGAAACCTGTTGCATCTTTGCTTTTGGTCCTTAATTTCTGCATGTATGTTGTTGTTTTAGGTATTGGTGGTTGGGCTATGAACTTTGCCATTGATAATGGTTTTGTCATTGGTAAGCATCTTGTCAAAATCTTTCTTGTTTTTATAACCGTTGTGTCTAGGTCAGTTGGCATGCACCACAACTGTTAGCCTGATCGAACAATAATTTTCACTCACTTCATTGACTAAGTTTGTTGTTGGAGAGAGTTTAGTCTACTAAATGTACTTCCATCTTTTTACTAAGTATTGTCTTTTGTTAAAGACTGATCATGGTGTGTGTGATTTATTACAGGTCCAGGAATGAATCTTCCAGCACATTTCTCACCAATTTACTTCCCAATTGGAAATGCTGCCACTGGATTCTTTGTTGTATTTGCTTTGATAGCAGGTGTGGTTGGAGTTGCATCTGTTCTCTCTGGACTTAACCACATTCGCCATTGGAACATCGATAGCTTACCATCTGCTGCTTCTGCTGCTACAATAGCCTGGAGTCTTACAGTCCTTGCCATGGGGTAAGGCCCTGTCTGTTTTCACTTAACGGAAGATCTGAATCTGAATTTATCTCTTGACGCGTTGTGCTATTTATTCTTTTTTAATGTACTCTTCTACATATCAGTATAAGTAATGAAATTGTCATCCATGCAGCTTTGCTTGGAAAGAAATTGAACTCAACTACAGGAATTCCAAATTGGTATAGCACCCTTCATCTGTATACAAATATGCAAATTTCAAAGAACTATTGACATTAACTCCTGCACAATTTTTTGCAGAAAACAAT</genome_strand>
        <mrna_strand>AACATAATCTTCTTAGCCTTTACAACACAAAAAAAGAAAAAAACTTATTCAGTTTTCATCAAAAAGAGGTTTCAAGCCTTACTATCATTATCATTTTCAAGAACCAAGAATGGCTAGTGAGCAGATGAAACCTGTTGCATCTTTGCTTTTGGTCCTTAATTTCTGCATGTATGTTGTTGTTTTAGGTATTGGTGGTTGGGCTATGAACTTTGCCATTGATAATGGTTTTGTCATTG...........................................................................................................................................................................................................................GTCCAGGAATGAATCTTCCAGCACATTTCTCACCAATTTACTTCCCAATTGGAAATGCTGCCACTGGATTCTTTGTTGTATTTGCTTTGATAGCAGGTGTGGTTGGAGTTGCATCTGTTCTCTCTGGACTTAACCACATTCGCCATTGGAACATCGATAGCTTACCATCTGCTGCTTCTGCTGCTACAATAGCCTGGAGTCTTACAGTCCTTGCCATGGG.....................................................................................................................................CTTTGCTTGGAAAGAAATTGAACTCAACTACAGGAATTCCAAATTG...............................................................................AAAACAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072A04-Nv8Bc/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="C2_At1g29520" ref_strand="+" ref_description="C2_At1g29520">
      <seq>acataatcttcttagcctttacaacacaaaaaaagaaaaaaacttattcagttttcatcaaaaagaggtttcaagccttactatcattatcattttcaagaaccaagaatggctagtgagcagatgaaacctgttgcatctttgcttttggtccttaatttctgcatgtatgttgttgttttaggtattggtggttgggctatgaactttgccattgataatggttttgtcattggtccaggaatgaatcttccagcacatttctcaccaatttacttcccaattggaaatgctgccactggattctttgttgtatttgctttgatagcaggtgtggttggagttgcatctgttctctctggacttaaccacattcgccattggaacatcgatagcttaccatctgctgcttctgctgctacaatagcctggagtcttacagtccttgccatgggctttgcttggaaagaaattgaactcaactacaggaattccaaattgaaaacaatggaggcattcatgataattctatcatttactcaactggtatacatagctgccattcatggtgcttcatcaaggagataaatgagcttcgaagataaatcgtatcgtgtgaaatttattgattgagactgttgtttccttttctttttttgttttaacaattgtgtcattgtatttattcattattgtgtacacaaagttggccagatggctgtttgtatatcaactatcttcagtattcatattgtaagaaacaaataagtgatgtacccttcattggctttttcccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072A04-Nv8Bc/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0072A04.2" temp_strand="+" temp_description="C02HBa0072A04.2  AC215375.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0072A04 sequenced_by:kribb upload_account_name:korea">
        <position start="31930" stop="33765"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32230" g_stop="32464" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="235" r_length="235" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32465" i_stop="32683" i_length="219">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32684" g_stop="32903" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="455" r_length="220" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32904" i_stop="33036" i_length="133">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.930" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33037" g_stop="33082" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="501" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="33083" i_stop="33161" i_length="79">
            <donor d_prob="0.917" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33162" g_stop="33466" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="502" r_stop="806" r_length="305" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072A04.2" gen_strand="+" ref_id="C2_At1g29520" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>806</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072A04.2" gen_strand="+"/>
        <rDNA rDNA_id="C2_At1g29520" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32230" e_stop="32464"/>
          <exon e_start="32684" e_stop="32903"/>
          <exon e_start="33037" e_stop="33082"/>
          <exon e_start="33162" e_stop="33466"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATAATCTTCTTAGCCTTTACAACACAAAAAAAGAAAAAAACTTATTCAGTTTTCATCAAAAAGAGGTTTCAAGCCTTACTATCATTATCATTTTCAAGAACCAAGAATGGCTAGTGAGCAGATGAAACCTGTTGCATCTTTGCTTTTGGTCCTTAATTTCTGCATGTATGTTGTTGTTTTAGGTATTGGTGGTTGGGCTATGAACTTTGCCATTGATAATGGTTTTGTCATTGGTAAGCATCTTGTCAAAATCTTTCTTGTTTTTATAACCGTTGTGTCTAGGTCAGTTGGCATGCACCACAACTGTTAGCCTGATCGAACAATAATTTTCACTCACTTCATTGACTAAGTTTGTTGTTGGAGAGAGTTTAGTCTACTAAATGTACTTCCATCTTTTTACTAAGTATTGTCTTTTGTTAAAGACTGATCATGGTGTGTGTGATTTATTACAGGTCCAGGAATGAATCTTCCAGCACATTTCTCACCAATTTACTTCCCAATTGGAAATGCTGCCACTGGATTCTTTGTTGTATTTGCTTTGATAGCAGGTGTGGTTGGAGTTGCATCTGTTCTCTCTGGACTTAACCACATTCGCCATTGGAACATCGATAGCTTACCATCTGCTGCTTCTGCTGCTACAATAGCCTGGAGTCTTACAGTCCTTGCCATGGGGTAAGGCCCTGTCTGTTTTCACTTAACGGAAGATCTGAATCTGAATTTATCTCTTGACGCGTTGTGCTATTTATTCTTTTTTAATGTACTCTTCTACATATCAGTATAAGTAATGAAATTGTCATCCATGCAGCTTTGCTTGGAAAGAAATTGAACTCAACTACAGGAATTCCAAATTGGTATAGCACCCTTCATCTGTATACAAATATGCAAATTTCAAAGAACTATTGACATTAACTCCTGCACAATTTTTTGCAGAAAACAATGGAGGCATTCATGATAATTCTATCATTTACTCAACTGGTATACATAGCTGCCATTCATGGTGCTTCATCAAGGAGATAAATGAGCTTCGAAGATAAATCGTATCGTGTGAAATTTATTGATTGAGACTGTTGTTTCCTTTTCTTTTTTTGTTTTAACAATTGTGTCATTGTATTTATTCATTATTGTGTACACAAAGTTGGCCAGATGGCTGTTTGTATATCAACTATCTTCAGTATTCATATTGTAAGAAACAAATAAGTGATGTACCCTTCATTGGCTTTTTCCCAGAAGAAAAT</genome_strand>
        <mrna_strand>ACATAATCTTCTTAGCCTTTACAACACAAAAAAAGAAAAAAACTTATTCAGTTTTCATCAAAAAGAGGTTTCAAGCCTTACTATCATTATCATTTTCAAGAACCAAGAATGGCTAGTGAGCAGATGAAACCTGTTGCATCTTTGCTTTTGGTCCTTAATTTCTGCATGTATGTTGTTGTTTTAGGTATTGGTGGTTGGGCTATGAACTTTGCCATTGATAATGGTTTTGTCATTG...........................................................................................................................................................................................................................GTCCAGGAATGAATCTTCCAGCACATTTCTCACCAATTTACTTCCCAATTGGAAATGCTGCCACTGGATTCTTTGTTGTATTTGCTTTGATAGCAGGTGTGGTTGGAGTTGCATCTGTTCTCTCTGGACTTAACCACATTCGCCATTGGAACATCGATAGCTTACCATCTGCTGCTTCTGCTGCTACAATAGCCTGGAGTCTTACAGTCCTTGCCATGGG.....................................................................................................................................CTTTGCTTGGAAAGAAATTGAACTCAACTACAGGAATTCCAAATTG...............................................................................AAAACAATGGAGGCATTCATGATAATTCTATCATTTACTCAACTGGTATACATAGCTGCCATTCATGGTGCTTCATCAAGGAGATAAATGAGCTTCGAAGATAAATCGTATCGTGTGAAATTTATTGATTGAGACTGTTGTTTCCTTTTCTTTTTTTGTTTTAACAATTGTGTCATTGTATTTATTCATTATTGTGTACACAAAGTTGGCCAGATGGCTGTTTGTATATCAACTATCTTCAGTATTCATATTGTAAGAAACAAATAAGTGATGTACCCTTCATTGGCTTTTTCCCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072A04-Nv8Bc/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="U223436" ref_strand="+" ref_description="U223436">
      <seq>acataatcttcttagcctttacaacacaaaaaaagaaaaaaacttattcagttttcatcaaaaagaggtttcaagccttactatcattatcattttcaagaaccaagaatggctagtgagcagatgaaacctgttgcatctttgcttttggtccttaatttctgcatgtatgttgttgttttaggtattggtggttgggctatgaactttgccattgataatggttttgtcattggtccaggaatgaatcttccagcacatttctcaccaatttacttcccaattggaaatgctgccactggattctttgttgtatttgctttgatagcaggtgtggttggagttgcatctgttctctctggacttaaccacattcgccattggaacatcgatagcttaccatctgctgcttctgctgctacaatagcctggagtcttacagtccttgccatgggctttgcttggaaagaaattgaactcaactacaggaattccaaattgaaaacaatggaggcattcatgataattctatcatttactcaactggtatacatagctgccattcatggtgcttcatcaaggagataaatgagcttcgaagataaatcgtatcgtgtgaaatttattgattgagactgttgtttccttttctttttttgttttaacaattgtgtcattgtatttattcattattgtgtacacaaagttggccagatggctgtttgtatatcaactatcttcagtattcatattgtaagaaacaaataagtgatgtacccttcattggctttttcccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072A04-Nv8Bc/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0072A04.2" temp_strand="+" temp_description="C02HBa0072A04.2  AC215375.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0072A04 sequenced_by:kribb upload_account_name:korea">
        <position start="31930" stop="33765"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32230" g_stop="32464" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="235" r_length="235" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32465" i_stop="32683" i_length="219">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32684" g_stop="32903" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="455" r_length="220" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32904" i_stop="33036" i_length="133">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.930" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33037" g_stop="33082" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="501" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="33083" i_stop="33161" i_length="79">
            <donor d_prob="0.917" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33162" g_stop="33466" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="502" r_stop="806" r_length="305" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072A04.2" gen_strand="+" ref_id="U223436" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>806</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072A04.2" gen_strand="+"/>
        <rDNA rDNA_id="U223436" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32230" e_stop="32464"/>
          <exon e_start="32684" e_stop="32903"/>
          <exon e_start="33037" e_stop="33082"/>
          <exon e_start="33162" e_stop="33466"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATAATCTTCTTAGCCTTTACAACACAAAAAAAGAAAAAAACTTATTCAGTTTTCATCAAAAAGAGGTTTCAAGCCTTACTATCATTATCATTTTCAAGAACCAAGAATGGCTAGTGAGCAGATGAAACCTGTTGCATCTTTGCTTTTGGTCCTTAATTTCTGCATGTATGTTGTTGTTTTAGGTATTGGTGGTTGGGCTATGAACTTTGCCATTGATAATGGTTTTGTCATTGGTAAGCATCTTGTCAAAATCTTTCTTGTTTTTATAACCGTTGTGTCTAGGTCAGTTGGCATGCACCACAACTGTTAGCCTGATCGAACAATAATTTTCACTCACTTCATTGACTAAGTTTGTTGTTGGAGAGAGTTTAGTCTACTAAATGTACTTCCATCTTTTTACTAAGTATTGTCTTTTGTTAAAGACTGATCATGGTGTGTGTGATTTATTACAGGTCCAGGAATGAATCTTCCAGCACATTTCTCACCAATTTACTTCCCAATTGGAAATGCTGCCACTGGATTCTTTGTTGTATTTGCTTTGATAGCAGGTGTGGTTGGAGTTGCATCTGTTCTCTCTGGACTTAACCACATTCGCCATTGGAACATCGATAGCTTACCATCTGCTGCTTCTGCTGCTACAATAGCCTGGAGTCTTACAGTCCTTGCCATGGGGTAAGGCCCTGTCTGTTTTCACTTAACGGAAGATCTGAATCTGAATTTATCTCTTGACGCGTTGTGCTATTTATTCTTTTTTAATGTACTCTTCTACATATCAGTATAAGTAATGAAATTGTCATCCATGCAGCTTTGCTTGGAAAGAAATTGAACTCAACTACAGGAATTCCAAATTGGTATAGCACCCTTCATCTGTATACAAATATGCAAATTTCAAAGAACTATTGACATTAACTCCTGCACAATTTTTTGCAGAAAACAATGGAGGCATTCATGATAATTCTATCATTTACTCAACTGGTATACATAGCTGCCATTCATGGTGCTTCATCAAGGAGATAAATGAGCTTCGAAGATAAATCGTATCGTGTGAAATTTATTGATTGAGACTGTTGTTTCCTTTTCTTTTTTTGTTTTAACAATTGTGTCATTGTATTTATTCATTATTGTGTACACAAAGTTGGCCAGATGGCTGTTTGTATATCAACTATCTTCAGTATTCATATTGTAAGAAACAAATAAGTGATGTACCCTTCATTGGCTTTTTCCCAGAAGAAAAT</genome_strand>
        <mrna_strand>ACATAATCTTCTTAGCCTTTACAACACAAAAAAAGAAAAAAACTTATTCAGTTTTCATCAAAAAGAGGTTTCAAGCCTTACTATCATTATCATTTTCAAGAACCAAGAATGGCTAGTGAGCAGATGAAACCTGTTGCATCTTTGCTTTTGGTCCTTAATTTCTGCATGTATGTTGTTGTTTTAGGTATTGGTGGTTGGGCTATGAACTTTGCCATTGATAATGGTTTTGTCATTG...........................................................................................................................................................................................................................GTCCAGGAATGAATCTTCCAGCACATTTCTCACCAATTTACTTCCCAATTGGAAATGCTGCCACTGGATTCTTTGTTGTATTTGCTTTGATAGCAGGTGTGGTTGGAGTTGCATCTGTTCTCTCTGGACTTAACCACATTCGCCATTGGAACATCGATAGCTTACCATCTGCTGCTTCTGCTGCTACAATAGCCTGGAGTCTTACAGTCCTTGCCATGGG.....................................................................................................................................CTTTGCTTGGAAAGAAATTGAACTCAACTACAGGAATTCCAAATTG...............................................................................AAAACAATGGAGGCATTCATGATAATTCTATCATTTACTCAACTGGTATACATAGCTGCCATTCATGGTGCTTCATCAAGGAGATAAATGAGCTTCGAAGATAAATCGTATCGTGTGAAATTTATTGATTGAGACTGTTGTTTCCTTTTCTTTTTTTGTTTTAACAATTGTGTCATTGTATTTATTCATTATTGTGTACACAAAGTTGGCCAGATGGCTGTTTGTATATCAACTATCTTCAGTATTCATATTGTAAGAAACAAATAAGTGATGTACCCTTCATTGGCTTTTTCCCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072A04-Nv8Bc/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="C2_At4g18060" ref_strand="+" ref_description="C2_At4g18060">
      <seq>aaatcaaatcccacaaattgtaaaatccacccgctaagtttacagccatggatgctttgaggaagcaagctagtaagctcagagaacaagtcgctaaacagcaacaggcagtcatcaagcagtttagtgcaactggttatgaaagttctgatgttatggtcatcgatgaaatggagatgcaattgcatcatcaactggacaagttatataagtctacccgggagaaaagggattttcagaaagagattgttaaggcagctgaaacatttacggctataggatacaagcatatagaaacaggaactaaattatcagaagattgctgcaaatatggagtcgaaaatcccaatgacgaggtgttagctaaggctgcttctatttacggcgatgctcgtaaacatgcagagaaggaggttgaagatctaaataaactattcttcagtcaggtactggaaccattgagagctatggtagctggttctcccttagaggatgctcgtcatcttgctcagcgctacagtaaaatgaggcaagaggcggagatacaggcagccgaagtttctagaagacgagctcgggtgagggaagctcccatcccggagaatgtggcaaagctgcacgcagcagaaactaaaatgcaggaactcaaagccaacatgacaatactcggtaaagaagcagcagcagcattagctgctgtagaatcacagcaagagaggcttacatttcagaagcttgttgcaatggttgaagcagaaaagctttatcatgagagagttgctgttattctgggtaacattgaagctgagatagtttctgaaaagcagcgaaaagaagctgctcctcctgtagccacacttgctgtaaaccctccggcccacatacctgagaaaacgatatactttttgagcgaagctattcattcttttgaagctgaatcagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072A04-Nv8Bc/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0072A04.2" temp_strand="+" temp_description="C02HBa0072A04.2  AC215375.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0072A04 sequenced_by:kribb upload_account_name:korea">
        <position start="48676" stop="59383"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48976" g_stop="49082" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="107" r_length="107" r_score="0.925"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49083" i_stop="54839" i_length="5757">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54840" g_stop="54962" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="230" r_length="123" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54963" i_stop="56589" i_length="1627">
            <donor d_prob="0.312" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="56590" g_stop="56655" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="296" r_length="66" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="56656" i_stop="56993" i_length="338">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.831" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="56994" g_stop="57143" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="446" r_length="150" r_score="0.980"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57144" i_stop="58063" i_length="920">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58064" g_stop="58165" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="548" r_length="102" r_score="0.980"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="58166" i_stop="58282" i_length="117">
            <donor d_prob="0.781" d_score="0.96"/>
            <acceptor a_prob="0.885" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="58283" g_stop="58480" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="549" r_stop="746" r_length="198" r_score="0.970"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="58481" i_stop="58583" i_length="103">
            <donor d_prob="0.982" d_score="0.96"/>
            <acceptor a_prob="0.870" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="58584" g_stop="58646" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="747" r_stop="809" r_length="63" r_score="0.984"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="58647" i_stop="58733" i_length="87">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.983" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="58734" g_stop="58838" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="810" r_stop="914" r_length="105" r_score="0.914"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="58839" i_stop="59053" i_length="215">
            <donor d_prob="0.993" d_score="0.86"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="59054" g_stop="59083" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="915" r_stop="944" r_length="30" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072A04.2" gen_strand="+" ref_id="C2_At4g18060" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>944</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072A04.2" gen_strand="+"/>
        <rDNA rDNA_id="C2_At4g18060" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48976" e_stop="49082"/>
          <exon e_start="54840" e_stop="54962"/>
          <exon e_start="56590" e_stop="56655"/>
          <exon e_start="56994" e_stop="57143"/>
          <exon e_start="58064" e_stop="58165"/>
          <exon e_start="58283" e_stop="58480"/>
          <exon e_start="58584" e_stop="58646"/>
          <exon e_start="58734" e_stop="58838"/>
          <exon e_start="59054" e_stop="59083"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATCAAATCCCAAAAATCGTGAAATCCAGCGGCAAAGATTACAGCCATGGATGCTTTGAGAAAGCAAGCTAGTAAGCTCAGAGAACAAGTCGCTAAACAGCAACAGGTCCACCCAAGAATTCTTTTTTCTTGATCCAATTTTCTTTGTTTGGGGCTGTGAGAAAATGTGATTTTCTTGGAATTCGGGGGTAATGTTTACGCGTTTCTTCTTCTGGGTATTCCTCATCTAGTAGAACTGTAAAATGGGTAGAGTTTCAATTTTGGATTGATCATCTTTTTTATCTTCATTTGGTGGTCCATCTTGGTTTAATGTGCGAATGAATACTTGAATTCTTGACAATCACTGTATAAAAGTGAGGGAAGATTTTAAGCTTTATGAATTTCTATGTTTGTCAGTTTTTTCTTGAATTGGATGTGTTGCCAAAAAAAATGTCTTTTTCAGATTTTATTCTCCCTAATTGTAATTACTTTGGGCTTTGGAATTGGTATGGTAATACAAAAAGGTGCTAGGAGTAGAGGTGGATCCATGATTTGAAGTTTATGCCCTTTGATGTTACTGGGTTCTAAAAGTTATAATTTGTACATAGTAAATGAATAGTTTAAGATAATTACAAGGTTTGATGTAAACCAATTGTTAAGATCCTTGATCTTCACCATGTGAGGACCTTCAAGATAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAGGAGAGGAAATATAATGTTTGTGTATTTCCAACTTGTATTCAACAACCTGTACATACTGTATTTATACACTTCATTAACAACTTTTAACAAACTCTAACTACCTTCTAACAATATAACTAACAAGATACAACTAACTAATTAATGGAAAATATCTCTTTATTTAACATCCTCCCTCAAACTGATGCTTTGAATACATCCTTCAAGCACAGTTTGGTCATTAAGTGTTCATGTTGTTGCCTGCCAAGACTCTTGGTTAATAGATCTGCCTGCTGTTCCTTAGTAGAAACATAATGGGTTTTGATAACACCTTGTATAATCTTGTCTCTCACAAAATGACAATCAATGTCAATGTGCTTAGTTCTTTCATGAAAAATGGGATTTGCTGCAATCTGAATAGCAGCTTTGCTATCACAATAGAGACATATTGGAACCTTAATACTGATTCCCAGCTCTTTATACAAACCAATCAACCAAGTTATTTCAGCCACAACAGAAGCCATGCTTCTAAACTCTGCTTTAGCAGAGCTTCTAGCTACTGTTTCTTGTTTCTTTGACTTCCAAGACACTATAGCATTGCCAAACTTCACTAAGTATCCCGTGACAGACCTTCTAGTCTGTAAACAACCACCCCAGTCAGAATCACAATATGCTACAAATTTTCCAGAACTATCTGAGGGCATTAGAAGACCAAGACCTGGAGCATTTTTTATATATTTCACTACTCTTAAGGCAGCATTCATGTGAGATTGTTTGGGACTATGCATGAATTGACTAAGCACTTGCACTACATATGCAATGTCAACTCTAGTCATAGTAAGATATAATAACTTTCCTACTAGCCGTTGATATTGAGTAGGATCAACAAGTAATATATCTTCACTTGTAGAACCTGCTTCCTTAGTTATAAAATCATCATAGTCAACTGATGTAAGTTTCAGATTTGTCTCCAAAGGTGTGTTAACTGGTTTAGTGCCACTCAATCCCAACTCACTAATTAGTTCTAATGCATACTTCCTTTGGCTCATCACTATTCCCTTTTGTGATCTCACAAATTCAATTCCAAGGAAGAACTTCAATTCTCCAAGATCTTTCATTTTGAACTTTAGCTTTAAGTCATTCCTTGTTTGTAGAATCAGATCTGTACTGCTTCCTGTCACCAGCAAATCATCCACATAAACCAACACAACTACCAACTCTCCTTGAACTGTCTTGGTGAATAAGGAATAGTCAAAATGACTTTGTGAGAAGCCAAGTTGTATCAATGCATCAGTGAGTTTCTTGTTCCATTGCCTAGGTGCCTGTTTGAGTCCATAGAGAGACTTATGTAATTGAAGACAACATGCTTCCCCTCCTGGCTAGCAAAACCAGAGGGAACCTCCAAATACACTTCCTCCACTAAATCCCCTTGAAGAAAAGCATTATGAACATCCATCTGAAAAATAGACCAATGTTTAGCTGCTGCCACAGCCACAACTGACCTGACAGTGACCATCTTAGCAACTGGAGAGAAGGTCTCAGTGTAATCTAACCCCTCTTGTTGGCTATAACCTTTAGCTACAAGTCGAGCCTTGTACCTTTCCACAGCCCCAGAAGAAGATGTGTATTTAACTTTGAACACCCATTTACACCCAATAGGTTTCTTTCCAGGTGGTAGTTCAACTAAACTCCAAGTGTGATTATCTTGTAATGCTTGAATTTCAGATTGCATAGCAGCCACCCAATTTGGATCTTTAATAGCCTCAGTATAAGAAGTAGGTTCTTTGATGACAGAATAAGATGCCAAAGCAGCTCTACACACAGGTGATAAGTGATCATAACTAACCACATCAGATACTGGATAACAACAATTTGCACTTCCTTTGCTTGTGGAGACATAGTCATGCATCCAAATGGGAGGCTTAGTAGTCCTGGAAGACTTTCTAGTAATAGGAACTGTTGGAGATTGTAGTGTTGGAGTTTCAGAAACAGAAGCATCACCCATTGAAGAACTATCCATAGAAGGAACAGAAGAGGAAGGAGCAGGAGCAGGAATATTGAATGATGGAGCATTATTCTCTATATAGGATGACTGCAGTTCATCTTCCTTCGAGGAAAACAAATGAGAAGGAGAAGTGGAATTTGTCTTGAAAGGAAAAACATCTTCCTGAAATAAGACATCCCTACTTGTCAAAAATACTTTGGACTCCAAATCATACATAGTATAGCCCTTTTTTGACACTGAGTAACCAAGAAATGCTGCAGGAACAGCTCTTGGAGAAAATTTGTCCAACTTTCTTACCTAAGTTACATACCCCAAACAGCCAAATACTTTCATGTGAGCTAGAGAAGGTGAGTGTCTATGAAGTCTCTCAAAAGGAGATTTATCTTGAATGATTGCAGAAGGCAGTCTATTAATGATGTATACAGCAGTGATCACACAATAACCCCAAAATTTCAATGGTACACCAGCCTGAAATCTAATAGCTCTTGCTAAAACTAAAATGTGTCTATGTTTCCTCTCTATCACTCCATTTTGTTGTGGAGTGTAAGAGCAAGAACTTTGATGTACAGTCCCAAAAGACTTTAGCAATCCATTCATTTGTGAGTTAAAGAACTCACACCCATTATCAATCCTAAGACACTTCACCACAGAAGAATAAACAGTCTGAACCATAAGCAGAAATTCCTTAATCACAACAACAACATCAGCTTTAGAAGGTAGTAGAAACAACCAAGTATATCGAGAATAGTCATCAACAAGTGTAAGAAAGTATTTTTTTCCATTATGAGTAGGAACTCTATAAGGACCCCAAACATCACCATGAACTAACTGAAAACAACACTCAGAAGTAGTAGTGCTTAATGGAAAAGACAGTCTAGTTTGTTTTGCTAAAGGACACACATTACAACTCTTGATACATTTGTCCCAATGTGTAGAATTATGACCAAACAGCTTGCTTATAGTGACAGAAGAGGTGTGACCCAACCTCTTGTGCCAAAGATTCATACTCATGCTATAGCTATCAGAATCTGTAGAAGACATTCCAAGTGATGAAGAACAGGCATTAGTAGCTGCAGCAGCAACATTTGCTGTAAATGCTTTCTTATGACCTGATTGAAACACATACAAGCCATTTTCTTCCTTACCAATCCCCTTCACCTTGCCACTTGAGAGATCCTGAAGAATACAAAAATGAGGATAGAATAATACAGCACACTGAAGCTCCTTTGTCAGTTGAGAAACAGACAACAAATTGTATTTGAACTCAGGAATATGCATTACATTGGTTATCTCTTGACCAGGAAAGAGATAGGATGATCCTGTGTGAGTTACATTGACTACATTACCAGTAGGCAAATGAACTTTGCCTAGACCACTCTTGTTTACTGTTGTAGTGTGGGATAACAGCTCAACAGAACTAACCATATGACTAGAAGCACCAGAATCCACTATCCACTTAACATCATCTGAAATGATAGTAGTATGAGGGATCATACCTGCTGTCAAGGCTACATGATCAGCTTCAGATTTTTCTGAATCAAGCATGGTTAAGATATGTTTGTATTGTTGTTCAGTAAATTGAGGAATAGCACCAAATGCATCAGTAGAACCTTTAGACATGTGAGAAGATCCTGCAAAATTGGCAGATTGACCCCCAAACTGATTTCCAATATCACTAGGATTAGGATTGCCCTTACTAGTTTCATTTTCTTTGATATATGATCCTGTTTTCTTCTTGAATTTATAATCTGGAGGATATCCAATTAATTTGTAACACACTGCTTTTGTGTGACCTGTGAGATGACAATGATCACAGTAGAGATCACTCCTTCTGCTTCTGCCCTTGTAAGAGGAATTATTCCCCTGATAGTTAGTGCGTACACTCGAGTTGCTTTTACCACTAAACAAAGCTGTCCCTCAGCAATTTCAGAGCTGTAAGAGGAAGTAGAAGAACCCAGAGATCTTCTACTTTCCTCAGAAATGATCATGGCATATGCCTTATTAATCGATGGAGTCGGAAGCATCATCATGATATGATTTATAGACTGTGAGTAAGACTCATTTAAACCCATCAGAAATTGAAGAAGGCGTTGATACTCAAAGTGTTCCACATATTTCCTAGACTCACAACTACATCCAGGACATGGCATCAATGCATCAAATTCTGCCCATAGTTCTCTTAGTTTTGAGAAATAGGTTGAAACAGAAGAAATTCCTTGGTTAAGAGTAGAAATTTGTGAATGAAGGAAGAAGATTCGAGATCCATTAACCTTGTCAAATCGTTCTTGTAGATCAGTCCACACCTTATATGCACTTGTAGCATATACAATCCCACTAAGTAATTCAGTACATACAGAATTCATAATCCATGAAAGGACTATGGCATTACATTTCTCCCACAAATCATGAAGAGAAGCATCAAATTTCTCCTTAGGATATCGACCATCCACAAATCCTAACTTGCTTTTACCTAATAGACTAATTCGCATTGAACTGCTCCATAATGCATAATTCTCAGGGCCTGTTAGTTTAATCGAAATTAGGGAACTACCTGGTGTATCATTGGGCTGAAGAAACAAAGGACGGTGTTGATCGATTGTTACCAAAGTGGGTACAACTTCAGCTCCAATTTCCAGATCTGCAGGTGAACTAGCATTCACCATTGTTGAGATGTCGAACAGGAGAAAACAGAAACAGTAAAGAAGTGAGATGAAACGTGAACCAGAAACTGAGAAGATCGAAGGAATATGAGATCGATTACTCAAGCTCTGATACCATGTTAAGATCCTTGATCTTCACCATGTGAGGACCTTCAAGATGAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAGGAGAGGAAATATAATGTTTGTGTATTTCCAACTTGTATTCAACAACCTGTACATACTGTATTTATACACTTCATTAACAACTTTTAACAAACTCTAACTACCTTCTAACAATATAACTAACAAGATACAACTAACTAATTAATGGAAAATATCTCTTTATTTAACACCAATATCCTAAGATTGAAACATTTCTATTTAATTGAGTGATTGACTTTTGAGGGATGGTATAAATTGTTTCTTTCCATAGGTAAGTGTTAGTTTTATAGTGTCATTTATTGATTCTTACTTGCTAGAGATATTGATTCTTAAACACAGGCAGTCATCAAGCAGTTTAGTGCAACTGGTTATGAAAGTTCAGATGTTATGGTCATCGATGAAATGGAAATGCAATTGCATCATCAACTGGACAAGTTGTATAAGTCTACCCGGGAGAAAAGGGTAAGGGTTCTGTCACAAAATGTAAATAAAAGCTTGTTCGGTGCCTACAGTTCTTTTTCTTATATTGCAAATGTTTGATGTTGTGTCATTTACTTTCTAACTATGAAATTTACTACAGTAGTATATACCTGACTGCAATTTACTTATTTGCAGAATAACTGCTAATATATTCGTTTAGCATGTAATAGCTACTTAAATATTTAGTCATTATCAAAGACCTTTACTTTGCTCTTCCTGCTTCTTACGAATAGTTGATAATGCAAAAAGGTGAGTCATTTAGCCAAAATGATTTCTTTTAATGGGAGGTAGAGCATTCTTTGGTGTTAGTTAAATCTGACTTATAAAAGGAAGATGCCAAAATTTGAAGCAAGATTGCTATTTTTAAGTGCATTTGAAACTTGGTAATAGTTGTTAATAAGTAATATTGTCATGGAGTTAAGAAAAACTTAGTTGTTTCTTCATTTTCTATTACTTAATAAGTAGTTGGAGTGAGCAGCTTCCATACAATTTTGAAGAGGGATGCAAAGTGGGATGTAAAGATTCTTGAGTTCGAATATAGATAGTTTTGGAGATATTTTTCTTGTAGATGCATGCACGAACATGGATTTGCTGTGTTGAAAGTTTAGAGAACATATTCGTATTCACAACATGTCTAGATCTATTAAATTTAGTTAGAGCATTGGAGAACATTTCATATTGTTCTGTACTACACTGTAAAATATTTACTTACAATCATAGAAATAGATAATAACTACTCAACATGATGTACACTATAAATTGCCATCTCTTTTCTCTTATTTCAAATAGAACCAAAGTCTATTTTCTGGAGACTTAAGTTACTTCTGTCTGAAGTGTGGCCTAGTGGTCAATGCAATGGGTTGAAAACCACGAGGTCTCAAATTACAAAAACCTCTAGGTGATTCTTCCCATCTGTTCTAACCTTGATGGACAGACTTCGTTGTGGGTGGAAGGTGTCCGTATCAGTGCTACATGGTCTGAATATTCTGAACTAAATGGTTGCCTCTGTTGTGATTATTAGCTGGTTTACATTTTTGCCCGTCAAGGCTGAGATTTCACTTACCTGACCTGATCACGATGTTGTTCAGCTCGCCGCATTGATATGCATTCACTTTACTAAATTAGCTTGAGCTTGACCTATTTTAAGATATCCTTAGCAGGCTTGTTTAGTCATTTTCTTCTGCTCCGGCCTCTATAATTTATTGTTGTCTTGTTAAGATGCACTAGATCTTCTTCTTATGAAAGTTGAGCATAATGATATCGAGCTTGGCTTGTTGTATCAGGTTGAGCTATTCAGCTTGGCTTGTCTACATGCATCATTTTTCTAATTCTTCTTCGGATGACTCATATTAAGATACTTTTATATGCACTTGGCTTGTCATTTGTCTCTTGATTTTTTATTGTTGTTGTTGGTGCTAGGCACAAGACCATGTATATCTATGAACAAGATAAATGTCATGCTAGTGTAGAGCATTTCATTCCTATATCTTGTCTTTTGTAGTTATGACTAGGACTTGGCAAATTCATTGCTTAATTTTGATCTAAACTCACACTGTGTGTTTCCTTCTCTTTCTGAAGTTAGGATATCTCTGTTCGTATCATTTTGCAGGATTTTCAGAAAGAGATTGTTAAGGCAGCTGAAACATTTACAGCTATAGGATACAAGCATATAGAAGCAGGTAAAACTTTTGAAGGGTATTTTGTATAAATAGATCTACTTTCAGATGGAACTTTGTTCTAGTCATGATTCACTACCTCTATAATATTCAGGCAGCCCTTTATGTCTGTTTGCTGCTACTTCTAAAATATTTAGGCAGTCCTTTATGCCTTCTTGACGATATAACAAGATTATTCTTAACCTGGATGTTATATTCTTATTTTCTGGATACTGCCAGGCTAGAATCTCGTCCTCCCCTGTCCCATTATTGTGAGACTGAGACATGTTTTTTCTTTTTGCCTTTTTTTTTTTGCTTCTGTGTGTATTTCAACTTATTTGGTGGAAGTTTATGGTAGCCAGGAACTAAATTATCAGAAGATTGCTGCAAATATGGAGTTGAAAATCCCAATGACGAGGTGTTAGCTAAGGCTGCTTCTATTTACGGCGATGCTCGTAAGCATGCAGAGAAGGAGGTTGAAGATCTAAATAAACTATTCTTCAGTCAGGTAGGTACAATGTGCATGTAATCTGGAGTATGTTAATGAAAACTAATTAGAAGCAATATATATTGGCGTATTTATTTGTTAGAGTTGCATGAGCTAGATAAATGTGTCTTCCCTAGACCTAAATGTCAGTTGATTACTGGCTATCTTTGCAGTAGTTTATTACCTGCTAGCCTAAGAGTCTAAGATCGTGACATCCTTAATGGAAACTAATTAGAAGCAATAGATATTGGCGTATTTATTTGTTAGAGTTGCATGAGCTAGATAAATGTGTTTTCCCTAGACCTAAACATCAGTAGATTACTGGCTAAATTTGCAGTAGTTTATTACCTGCTAGCCTAAGAGTCTAAGATCGTGACATCCATACATGAATAGGCTTATAGCTGCTTTTTATGGGAAAGACTGCTTATGAATCTGTGAAGATAAAGAAATCAATGATGATAGTCTTAAGTTCTGGTGCTGATAGCAAGTGACAAATGCATAAAGAAATTGATGAAACAGTTTCTCGAAAACCTAAAGGATAATCATTTTCCTTTCCAGTTTTCTCCTTCGACGTGTGTGCCAAGAAAGAGGTCACTTCCATGTGCACATGTTGATCTTGGAAATTTTTTCTTTGGTTTCTGGGTGGTTTTCTGTAAGCACATGCTTCATTTGCAAAATGAAGAAGTAATCACCCTCTTTCCCAACCAAAAAGAAGGATTAATGGCATACTGTAAACATCATGATACCGACCTTTTTGTCCCATGAAACATAATTATGGCAAATATGTCAATACCTTCTTTTTACTTTTCTTTCTGTCTTTTCTTTTCAAGATACTGCACATTTATTTTTTTGATTCATGACACTTAGTAACATTAATCTATGTTCAATACTTCATAGTTCAGCCTTCGGCCGCAGACTAAAATGAGCTTTTGGATTTCCAGGTACTGGAACCATTGAGAGCTATGGTAGCTGGTTCTCCCTTAGAGGATGCTCGTCATCTAGCTCAGCGCTACAGTAAAATGCGGCAAGAGGCGGAGATACAGGTTACTGTAACGATTATTTCTTTTGCTAAAGACTATGATAAACGCCTGTTGATACTTGTCTTATTGTTCAATTATACACTGTCATCACATCCTTAGTATTGAATACAAAATAAGCAGGCAACCGAAGTTTCTAGAAGACAAGCTCGGGTGAGGGAAGCTCCCATCCCGGAGAATGTGGCAAAGCTGCACTCAGCAGAAACTAAAATGCAGGAACTCAAAGCCAACATGACAGTACTCGGTAAAGAAGCAGCAGCAGCATTAGCTGCTGTAGAATCACAGCAGGAGAGGCTTACATTTCAGAGGCTTGTTGCAATGGTATGTATGCTGGTGCATATTTGCCTCTCATGGAATTTAAACTTGTGTTTTGCATGGTCAACCATTTTCATACAATGGTTAAAGTGAGTATAATCATCTGCAGGTTGAAGCAGAAAAGCTTTATCATGAGAGAGTTGCTGTTATTCTGGGTAATATTGAAGCTGAGGTGAGTGTTTCTCCTTTTGTATTTCTCCAGAGGTATGCTTTACACCTAGGTAATTTTTTCTTACTCGACAATTTACAATTTGTACAGATAGTTTCTGAAAAGCAGCGAAAAGAGGCTGCTCCTCCTGTAGCCACACTTCCTGTTAACCCTCCGGCCCAAATACCTGAGAAAACAAAATACTTTTTGGCCGAGGTAACCGTCTGCTTTAACAACAGTTGTCTAAGTTGTTATAATCTTATCACAGAATGATTTATTTATTATACTATTTGAAAGAAACTTCTGAGGGAAAGCTGATTGACAATGAGGATATGTTGCTGGTGTGAGCTCTGAAGACACTCTTATCCGTGCAGTGTTACTGTTTATTAATGAGTTGAAGTGGTCTTAGTTTTTGTGTCTCTGTCACACAGGCTATTCATTCTTTTGAAGCTGAATCAGAA</genome_strand>
        <mrna_strand>AAATCAAATCCCACAAATTGTAAAATCCACCCGCTAAGTTTACAGCCATGGATGCTTTGAGGAAGCAAGCTAGTAAGCTCAGAGAACAAGTCGCTAAACAGCAACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTCATCAAGCAGTTTAGTGCAACTGGTTATGAAAGTTCTGATGTTATGGTCATCGATGAAATGGAGATGCAATTGCATCATCAACTGGACAAGTTATATAAGTCTACCCGGGAGAAAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTTCAGAAAGAGATTGTTAAGGCAGCTGAAACATTTACGGCTATAGGATACAAGCATATAGAA..................................................................................................................................................................................................................................................................................................................................................ACAGGAACTAAATTATCAGAAGATTGCTGCAAATATGGAGTCGAAAATCCCAATGACGAGGTGTTAGCTAAGGCTGCTTCTATTTACGGCGATGCTCGTAAACATGCAGAGAAGGAGGTTGAAGATCTAAATAAACTATTCTTCAGTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTGGAACCATTGAGAGCTATGGTAGCTGGTTCTCCCTTAGAGGATGCTCGTCATCTTGCTCAGCGCTACAGTAAAATGAGGCAAGAGGCGGAGATACAG.....................................................................................................................GCAGCCGAAGTTTCTAGAAGACGAGCTCGGGTGAGGGAAGCTCCCATCCCGGAGAATGTGGCAAAGCTGCACGCAGCAGAAACTAAAATGCAGGAACTCAAAGCCAACATGACAATACTCGGTAAAGAAGCAGCAGCAGCATTAGCTGCTGTAGAATCACAGCAAGAGAGGCTTACATTTCAGAAGCTTGTTGCAATG.......................................................................................................GTTGAAGCAGAAAAGCTTTATCATGAGAGAGTTGCTGTTATTCTGGGTAACATTGAAGCTGAG.......................................................................................ATAGTTTCTGAAAAGCAGCGAAAAGAAGCTGCTCCTCCTGTAGCCACACTTGCTGTAAACCCTCCGGCCCACATACCTGAGAAAACGATATACTTTTTGAGCGAA.......................................................................................................................................................................................................................GCTATTCATTCTTTTGAAGCTGAATCAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>7</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="8845" PGL_stop="18715"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8845" e_stop="9059"/>
            <exon e_start="10854" e_stop="10990"/>
            <exon e_start="11082" e_stop="11216"/>
            <exon e_start="11630" e_stop="11740"/>
            <exon e_start="11851" e_stop="12117"/>
            <exon e_start="14144" e_stop="14343"/>
            <exon e_start="14973" e_stop="15255"/>
            <exon e_start="15629" e_stop="15739"/>
            <exon e_start="16478" e_stop="16669"/>
            <exon e_start="18227" e_stop="18715"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.880" e_score="0.967"/>
          <exon-intron don_prob="0.017" acc_prob="0.922" e_score="0.956"/>
          <exon-intron don_prob="0.584" acc_prob="0.943" e_score="0.978"/>
          <exon-intron don_prob="0.985" acc_prob="0.880" e_score="0.982"/>
          <exon-intron don_prob="0.992" acc_prob="0.996" e_score="0.989"/>
          <exon-intron don_prob="0.986" acc_prob="0.945" e_score="1.000"/>
          <exon-intron don_prob="0.644" acc_prob="0.999" e_score="0.972"/>
          <exon-intron don_prob="0.936" acc_prob="0.962" e_score="0.991"/>
          <exon-intron don_prob="0.815" acc_prob="0.952" e_score="0.984"/>
          <exon-only e_score="0.959"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.967">
            <gDNA_exon_boundary e_start="8845" e_stop="9059" e_length="215"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.880">
            <gDNA_intron_boundary i_start="9060" i_stop="10853" i_length="1794"/>
          </intron>
          <exon e_serial="2" e_score="0.956">
            <gDNA_exon_boundary e_start="10854" e_stop="10990" e_length="137"/>
          </exon>
          <intron i_serial="2" don_prob="0.017" acc_prob="0.922">
            <gDNA_intron_boundary i_start="10991" i_stop="11081" i_length="91"/>
          </intron>
          <exon e_serial="3" e_score="0.978">
            <gDNA_exon_boundary e_start="11082" e_stop="11216" e_length="135"/>
          </exon>
          <intron i_serial="3" don_prob="0.584" acc_prob="0.943">
            <gDNA_intron_boundary i_start="11217" i_stop="11629" i_length="413"/>
          </intron>
          <exon e_serial="4" e_score="0.982">
            <gDNA_exon_boundary e_start="11630" e_stop="11740" e_length="111"/>
          </exon>
          <intron i_serial="4" don_prob="0.985" acc_prob="0.880">
            <gDNA_intron_boundary i_start="11741" i_stop="11850" i_length="110"/>
          </intron>
          <exon e_serial="5" e_score="0.989">
            <gDNA_exon_boundary e_start="11851" e_stop="12117" e_length="267"/>
          </exon>
          <intron i_serial="5" don_prob="0.992" acc_prob="0.996">
            <gDNA_intron_boundary i_start="12118" i_stop="14143" i_length="2026"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="14144" e_stop="14343" e_length="200"/>
          </exon>
          <intron i_serial="6" don_prob="0.986" acc_prob="0.945">
            <gDNA_intron_boundary i_start="14344" i_stop="14972" i_length="629"/>
          </intron>
          <exon e_serial="7" e_score="0.972">
            <gDNA_exon_boundary e_start="14973" e_stop="15255" e_length="283"/>
          </exon>
          <intron i_serial="7" don_prob="0.644" acc_prob="0.999">
            <gDNA_intron_boundary i_start="15256" i_stop="15628" i_length="373"/>
          </intron>
          <exon e_serial="8" e_score="0.991">
            <gDNA_exon_boundary e_start="15629" e_stop="15739" e_length="111"/>
          </exon>
          <intron i_serial="8" don_prob="0.936" acc_prob="0.962">
            <gDNA_intron_boundary i_start="15740" i_stop="16477" i_length="738"/>
          </intron>
          <exon e_serial="9" e_score="0.984">
            <gDNA_exon_boundary e_start="16478" e_stop="16669" e_length="192"/>
          </exon>
          <intron i_serial="9" don_prob="0.815" acc_prob="0.952">
            <gDNA_intron_boundary i_start="16670" i_stop="18226" i_length="1557"/>
          </intron>
          <exon e_serial="10" e_score="0.959">
            <gDNA_exon_boundary e_start="18227" e_stop="18715" e_length="489"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8845" stop="9059"/>
              <exon start="10854" stop="10990"/>
              <exon start="11082" stop="11216"/>
              <exon start="11630" stop="11740"/>
              <exon start="11851" stop="12117"/>
              <exon start="14144" stop="14343"/>
              <exon start="14973" stop="15255"/>
              <exon start="15629" stop="15739"/>
              <exon start="16478" stop="16669"/>
              <exon start="18227" stop="18715"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="C2_At5g46420" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTCTTTCTTTCTTGGATGTTATCAGAAAACATGCAAGGCTCCTCTGCTCTTTCCTGTTCTTCAAATTCTATCTCTGCTCCAGTTGGTCTTTGTTGTTCTCAAAGATTAACACTTCCTTTTCGAAATCAAAGAATTGGGTTTCTGGAAAATCCATCAAGCTTGAAGATTTTCCATTTTCACCGAAACACTACCCTCCCTTTGCTGAACTGCACTG : CTACGGAAGAGATCGTGGAGGCTAGTGAAACAGAGGGATTATTTGTTGAAACTGGGTACATATATAGTGTTCATGGGCTTCAAGGTGAGGTTCGAGTAAAAGCGACAACTGATTTCCCTGAATTGCGATTTTCCCAG : CCAGGAAGGCGATGGTTGAGGCAGCAAGTTACAGGGAGAGATATGATTCAAGAAATCGAACTAGTGGAGGGAAGAGGTCATCCAGGACAGAAGAGTTGGATACTTAAATTCCACGAGATTAACACAATTGAGCAG : GCCCAAAAACTTGTGGGGTCGGCCTTACTGGTGAAGAATGAAGATAGACCAATCCTGGAGGAAGGTGAATTTTACACCCCTGACCTTGTTGGGATGAAAGTATTTCTAAAG : GAAACTAGAGAACTGGTAGGAACTGTTATTAATGTTTTCAACAGTGGAGCTAGTGATCTCCTACATGTTGAGCTTCTACCGAATCAAAATGCAAGACCACAGTTGGAAGGAAGTGCATCTGGTCCTCTTGTATGGGTCCCTTTCGTTGAAGCAATTGTTCCAAATATTGATTTGAGTAAAAGGGAAATGCTGATTACACCTCCAAAGGGTCTTTTAGAATTGAACATCCGTGCAGATGAGAGGTCCAAGAAAGAGAGGCGACAGCTT : GAATGGAAAGAGAGAAAAAAGTCTCAGAAACGCCTCATAGCAGCCAAGAAAATATTGCATGAAATGGAACAAGATCATATATTTCATGGTTTCAGATATGGAGAGAAAAACCAAAGGAGCTTCCTTGCAAATCAGATAGTTGATGTAAATTCCATCTTGCTTCAGCATGCCTTGCAGAATAAAAAGATTCCATATAAGAG : ATGGAGCTTTCCAGACTTTGTTAATGCTTTACAAGTAAACAATACATTAAAACTATCCAAAGAATTCTTCTCTAAAGAAAATGTTGAACACTCAAGCATTGTTTCTAAAGTTCAAGAGCAGGGTCATTGCCTCATATCTTCTGGCAAGGTTGCGATTGTTTTAGCTTTGACAGAAACTAAGCTTCTTGGAACGTCTTTTATTCCTGAACCTGCTAAGCCTCATGAGGAGATTGCTTATCTGCACGTCAAGGGATTGCTAAATGACAGCCACAGATTGCTCAAG : ATGGAGGACCGGCCCTCTGTACCTCTTATAGTTGTGTGTCCTGCTGAATCTATTGAATATCTCAAACAATTGTTCATGGATCATGACTACTTCTCTTTCGACTCTGAGAAG : GTTTGGTTCTTGGAAGAAGAGAAGCTCCCTGTTGTCAGTGCTTCACAGGAAGAAGAAAACAAACATAAAATTTTAATGAAATCACCATGGGAGATACTCCAAAGACCAGCTGGATCTGCAGGAATTGTTACTGTGCTTTCATCACAGAACCTACTAGAGCATTTACATGTGATGGGTGTGGAGTATATTCAG : GTATGTTCTGGCAATCAAGAATTCATTAATGGGGAGATGCTACTTGGTTTTACCAAGTCTCGTGAAGCCAATGCGGGGATCCAAGTCTTCAGGGATGTTGGCTACTTGGAAGAACACTTCAACATAGTATTTTCCATTGATTTTGCAAGGAAATTGACTAAGAAGATAGACAAACTTCAATTTGAAGCCATTTTAAAGCCAAATCAGTATGTGCAGATGGTAGAAAAAGAATGGGTTGATGTCATCCCCTCCTCACCCAGCTCGTATGAGTTCCATTCATCGATATATAGCTGCTTGAACTCTTGTCCTCCTAGTAAGGTTTGTCTGGTAGACATTACTGCATGATATTGATATCTGCATACATGTATATGACTCCAACTTAGCCTCAAAAGCATAGAAGATGTTATAATAACACCAGTATCTTTGTTCTTAATATCACACCCTTCTTTTCTTTTTCTTCTGTTTCCTTATTAATGTTTCAACTTCATT</gDNA_template>
            <first_frame> F  L  S  F  L  D  V  I  R  K  H  A  R  L  L  C  S  F  L  F  F  K  F  Y  L  C  S  S  W  S  L  L  F  S  K  I  N  T  S  F  S  K  S  K  N  W  V  S  G  K  S  I  K  L  E  D  F  P  F  S  P  K  H  Y  P  P  F  A  E  L  H  C :   Y  G  R  D  R  G  G  *  *  N  R  G  I  I  C  *  N  W  V  H  I  *  C  S  W  A  S  R  *  G  S  S  K  S  D  N  *  F  P  *  I  A  I  F  P   : A  R  K  A  M  V  E  A  A  S  Y  R  E  R  Y  D  S  R  N  R  T  S  G  G  K  R  S  S  R  T  E  E  L  D  T  *  I  P  R  D  *  H  N  *  A   : G  P  K  T  C  G  V  G  L  T  G  E  E  *  R  *  T  N  P  G  G  R  *  I  L  H  P  *  P  C  W  D  E  S  I  S  K   : G  N  *  R  T  G  R  N  C  Y  *  C  F  Q  Q  W  S  *  *  S  P  T  C  *  A  S  T  E  S  K  C  K  T  T  V  G  R  K  C  I  W  S  S  C  M  G  P  F  R  *  S  N  C  S  K  Y  *  F  E  *  K  G  N  A  D  Y  T  S  K  G  S  F  R  I  E  H  P  C  R  *  E  V  Q  E  R  E  A  T  A   : *  M  E  R  E  K  K  V  S  E  T  P  H  S  S  Q  E  N  I  A  *  N  G  T  R  S  Y  I  S  W  F  Q  I  W  R  E  K  P  K  E  L  P  C  K  S  D  S  *  C  K  F  H  L  A  S  A  C  L  A  E  *  K  D  S  I  *  E  :  M  E  L  S  R  L  C  *  C  F  T  S  K  Q  Y  I  K  T  I  Q  R  I  L  L  *  R  K  C  *  T  L  K  H  C  F  *  S  S  R  A  G  S  L  P  H  I  F  W  Q  G  C  D  C  F  S  F  D  R  N  *  A  S  W  N  V  F  Y  S  *  T  C  *  A  S  *  G  D  C  L  S  A  R  Q  G  I  A  K  *  Q  P  Q  I  A  Q   : D  G  G  P  A  L  C  T  S  Y  S  C  V  S  C  *  I  Y  *  I  S  Q  T  I  V  H  G  S  *  L  L  L  F  R  L  *  E   : G  L  V  L  G  R  R  E  A  P  C  C  Q  C  F  T  G  R  R  K  Q  T  *  N  F  N  E  I  T  M  G  D  T  P  K  T  S  W  I  C  R  N  C  Y  C  A  F  I  T  E  P  T  R  A  F  T  C  D  G  C  G  V  Y  S   : G  M  F  W  Q  S  R  I  H  *  W  G  D  A  T  W  F  Y  Q  V  S  *  S  Q  C  G  D  P  S  L  Q  G  C  W  L  L  G  R  T  L  Q  H  S  I  F  H  *  F  C  K  E  I  D  *  E  D  R  Q  T  S  I  *  S  H  F  K  A  K  S  V  C  A  D  G  R  K  R  M  G  *  C  H  P  L  L  T  Q  L  V  *  V  P  F  I  D  I  *  L  L  E  L  L  S  S  *  *  G  L  S  G  R  H  Y  C  M  I  L  I  S  A  Y  M  Y  M  T  P  T  *  P  Q  K  H  R  R  C  Y  N  N  T  S  I  F  V  L  N  I  T  P  F  F  S  F  S  S  V  S  L  L  M  F  Q  L  H  </first_frame>
            <second_frame>  F  F  L  S  W  M  L  S  E  N  M  Q  G  S  S  A  L  S  C  S  S  N  S  I  S  A  P  V  G  L  C  C  S  Q  R  L  T  L  P  F  R  N  Q  R  I  G  F  L  E  N  P  S  S  L  K  I  F  H  F  H  R  N  T  T  L  P  L  L  N  C  T   : A  T  E  E  I  V  E  A  S  E  T  E  G  L  F  V  E  T  G  Y  I  Y  S  V  H  G  L  Q  G  E  V  R  V  K  A  T  T  D  F  P  E  L  R  F  S  Q  :  P  G  R  R  W  L  R  Q  Q  V  T  G  R  D  M  I  Q  E  I  E  L  V  E  G  R  G  H  P  G  Q  K  S  W  I  L  K  F  H  E  I  N  T  I  E  Q  :  A  Q  K  L  V  G  S  A  L  L  V  K  N  E  D  R  P  I  L  E  E  G  E  F  Y  T  P  D  L  V  G  M  K  V  F  L  K  :  E  T  R  E  L  V  G  T  V  I  N  V  F  N  S  G  A  S  D  L  L  H  V  E  L  L  P  N  Q  N  A  R  P  Q  L  E  G  S  A  S  G  P  L  V  W  V  P  F  V  E  A  I  V  P  N  I  D  L  S  K  R  E  M  L  I  T  P  P  K  G  L  L  E  L  N  I  R  A  D  E  R  S  K  K  E  R  R  Q  L  :  E  W  K  E  R  K  K  S  Q  K  R  L  I  A  A  K  K  I  L  H  E  M  E  Q  D  H  I  F  H  G  F  R  Y  G  E  K  N  Q  R  S  F  L  A  N  Q  I  V  D  V  N  S  I  L  L  Q  H  A  L  Q  N  K  K  I  P  Y  K  R :   W  S  F  P  D  F  V  N  A  L  Q  V  N  N  T  L  K  L  S  K  E  F  F  S  K  E  N  V  E  H  S  S  I  V  S  K  V  Q  E  Q  G  H  C  L  I  S  S  G  K  V  A  I  V  L  A  L  T  E  T  K  L  L  G  T  S  F  I  P  E  P  A  K  P  H  E  E  I  A  Y  L  H  V  K  G  L  L  N  D  S  H  R  L  L  K  :  M  E  D  R  P  S  V  P  L  I  V  V  C  P  A  E  S  I  E  Y  L  K  Q  L  F  M  D  H  D  Y  F  S  F  D  S  E  K  :  V  W  F  L  E  E  E  K  L  P  V  V  S  A  S  Q  E  E  E  N  K  H  K  I  L  M  K  S  P  W  E  I  L  Q  R  P  A  G  S  A  G  I  V  T  V  L  S  S  Q  N  L  L  E  H  L  H  V  M  G  V  E  Y  I  Q  :  V  C  S  G  N  Q  E  F  I  N  G  E  M  L  L  G  F  T  K  S  R  E  A  N  A  G  I  Q  V  F  R  D  V  G  Y  L  E  E  H  F  N  I  V  F  S  I  D  F  A  R  K  L  T  K  K  I  D  K  L  Q  F  E  A  I  L  K  P  N  Q  Y  V  Q  M  V  E  K  E  W  V  D  V  I  P  S  S  P  S  S  Y  E  F  H  S  S  I  Y  S  C  L  N  S  C  P  P  S  K  V  C  L  V  D  I  T  A  *  Y  *  Y  L  H  T  C  I  *  L  Q  L  S  L  K  S  I  E  D  V  I  I  T  P  V  S  L  F  L  I  S  H  P  S  F  L  F  L  L  F  P  Y  *  C  F  N  F  I </second_frame>
            <third_frame>   S  F  F  L  G  C  Y  Q  K  T  C  K  A  P  L  L  F  P  V  L  Q  I  L  S  L  L  Q  L  V  F  V  V  L  K  D  *  H  F  L  F  E  I  K  E  L  G  F  W  K  I  H  Q  A  *  R  F  S  I  F  T  E  T  L  P  S  L  C  *  T  A  L  :  L  R  K  R  S  W  R  L  V  K  Q  R  D  Y  L  L  K  L  G  T  Y  I  V  F  M  G  F  K  V  R  F  E  *  K  R  Q  L  I  S  L  N  C  D  F  P  S :   Q  E  G  D  G  *  G  S  K  L  Q  G  E  I  *  F  K  K  S  N  *  W  R  E  E  V  I  Q  D  R  R  V  G  Y  L  N  S  T  R  L  T  Q  L  S  R :   P  K  N  L  W  G  R  P  Y  W  *  R  M  K  I  D  Q  S  W  R  K  V  N  F  T  P  L  T  L  L  G  *  K  Y  F  *  R :   K  L  E  N  W  *  E  L  L  L  M  F  S  T  V  E  L  V  I  S  Y  M  L  S  F  Y  R  I  K  M  Q  D  H  S  W  K  E  V  H  L  V  L  L  Y  G  S  L  S  L  K  Q  L  F  Q  I  L  I  *  V  K  G  K  C  *  L  H  L  Q  R  V  F  *  N  *  T  S  V  Q  M  R  G  P  R  K  R  G  D  S  L :   N  G  K  R  E  K  S  L  R  N  A  S  *  Q  P  R  K  Y  C  M  K  W  N  K  I  I  Y  F  M  V  S  D  M  E  R  K  T  K  G  A  S  L  Q  I  R  *  L  M  *  I  P  S  C  F  S  M  P  C  R  I  K  R  F  H  I  R   : D  G  A  F  Q  T  L  L  M  L  Y  K  *  T  I  H  *  N  Y  P  K  N  S  S  L  K  K  M  L  N  T  Q  A  L  F  L  K  F  K  S  R  V  I  A  S  Y  L  L  A  R  L  R  L  F  *  L  *  Q  K  L  S  F  L  E  R  L  L  F  L  N  L  L  S  L  M  R  R  L  L  I  C  T  S  R  D  C  *  M  T  A  T  D  C  S  R :   W  R  T  G  P  L  Y  L  L  *  L  C  V  L  L  N  L  L  N  I  S  N  N  C  S  W  I  M  T  T  S  L  S  T  L  R  R :   F  G  S  W  K  K  R  S  S  L  L  S  V  L  H  R  K  K  K  T  N  I  K  F  *  *  N  H  H  G  R  Y  S  K  D  Q  L  D  L  Q  E  L  L  L  C  F  H  H  R  T  Y  *  S  I  Y  M  *  W  V  W  S  I  F  R :   Y  V  L  A  I  K  N  S  L  M  G  R  C  Y  L  V  L  P  S  L  V  K  P  M  R  G  S  K  S  S  G  M  L  A  T  W  K  N  T  S  T  *  Y  F  P  L  I  L  Q  G  N  *  L  R  R  *  T  N  F  N  L  K  P  F  *  S  Q  I  S  M  C  R  W  *  K  K  N  G  L  M  S  S  P  P  H  P  A  R  M  S  S  I  H  R  Y  I  A  A  *  T  L  V  L  L  V  R  F  V  W  *  T  L  L  H  D  I  D  I  C  I  H  V  Y  D  S  N  L  A  S  K  A  *  K  M  L  *  *  H  Q  Y  L  C  S  *  Y  H  T  L  L  F  F  F  F  C  F  L  I  N  V  S  T  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072A04.2" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8846" stop="9059"/>
                    <exon start="10854" stop="10990"/>
                    <exon start="11082" stop="11216"/>
                    <exon start="11630" stop="11740"/>
                    <exon start="11851" stop="12117"/>
                    <exon start="14144" stop="14343"/>
                    <exon start="14973" stop="15255"/>
                    <exon start="15629" stop="15739"/>
                    <exon start="16478" stop="16669"/>
                    <exon start="18227" stop="18571"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1992</number_coding_nucleotides>
                  <number_encoded_amino_acids>664</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFLSWMLSENMQGSSALSCSSNSISAPVGLCCSQRLTLPFRNQRIGFLENPSSLKIFHFHRNTTLPLLNCTATEEIVEASETEGLFVETGYIYSVHGLQGEVRVKATTDFPELRFSQPGRRWLRQQVTGRDMIQEIELVEGRGHPGQKSWILKFHEINTIEQAQKLVGSALLVKNEDRPILEEGEFYTPDLVGMKVFLKETRELVGTVINVFNSGASDLLHVELLPNQNARPQLEGSASGPLVWVPFVEAIVPNIDLSKREMLITPPKGLLELNIRADERSKKERRQLEWKERKKSQKRLIAAKKILHEMEQDHIFHGFRYGEKNQRSFLANQIVDVNSILLQHALQNKKIPYKRWSFPDFVNALQVNNTLKLSKEFFSKENVEHSSIVSKVQEQGHCLISSGKVAIVLALTETKLLGTSFIPEPAKPHEEIAYLHVKGLLNDSHRLLKMEDRPSVPLIVVCPAESIEYLKQLFMDHDYFSFDSEKVWFLEEEKLPVVSASQEEENKHKILMKSPWEILQRPAGSAGIVTVLSSQNLLEHLHVMGVEYIQVCSGNQEFINGEMLLGFTKSREANAGIQVFRDVGYLEEHFNIVFSIDFARKLTKKIDKLQFEAILKPNQYVQMVEKEWVDVIPSSPSSYEFHSSIYSCLNSCPPSKVCLVDITA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="28282" PGL_stop="28923"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28282" e_stop="28923"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="28282" e_stop="28923" e_length="642"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28282" stop="28923"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="TG451-R" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCTTTCGGCCAGTTCTAAGTTTAAATGCTTCTTACAACCACTAAGCAAAGCTAACCATATTGACAAATTTGGTCTCATGGGCATGCTTTTCACCAAATCCTCTGCTTCATTTAACTTCCCACTTCTGCAAAGGATATCTACCATACAACTATAATGCTCAAGTGTCACTTCAATGGATGAGCTTTGGGGGATATATTGAAATAAGCGTCTTCCTTTCTCTAGCATGCCAGAATGGCTACAAGCAGCAAGTAACCCAGTAAATGTAATATCATCCATATCAGCCCTTGAACGAACCATCTGGGCGAATAATGTGAGTGCCCAATTACCAAATCCATGTTGTGCACATCCAACGATGGTTGAGTTCCACGAAACTGTGTTTTTTTCAGGGATCTCCTTGAATGCAATGAGTCCATCGTTTATATTTCCACATTTTGAATACAATACAACTAGTGAATTGCCAACAAAGGCATCAGTGTTCAATCCCAGTTTGACTGCTACACCATGAATCTCTTTGCCAAGATCAATAGACTCCATTTCACAGGATGAATTTAGGGCACTAGTGAAGGAAGATTGATTGGGAAGTAGACCAATCCTAATCATGTCCCCAAACACTTTCAATGCTTCTTTGTGCTTATAATTCA</gDNA_template>
            <first_frame> L  F  R  P  V  L  S  L  N  A  S  Y  N  H  *  A  K  L  T  I  L  T  N  L  V  S  W  A  C  F  S  P  N  P  L  L  H  L  T  S  H  F  C  K  G  Y  L  P  Y  N  Y  N  A  Q  V  S  L  Q  W  M  S  F  G  G  Y  I  E  I  S  V  F  L  S  L  A  C  Q  N  G  Y  K  Q  Q  V  T  Q  *  M  *  Y  H  P  Y  Q  P  L  N  E  P  S  G  R  I  M  *  V  P  N  Y  Q  I  H  V  V  H  I  Q  R  W  L  S  S  T  K  L  C  F  F  Q  G  S  P  *  M  Q  *  V  H  R  L  Y  F  H  I  L  N  T  I  Q  L  V  N  C  Q  Q  R  H  Q  C  S  I  P  V  *  L  L  H  H  E  S  L  C  Q  D  Q  *  T  P  F  H  R  M  N  L  G  H  *  *  R  K  I  D  W  E  V  D  Q  S  *  S  C  P  Q  T  L  S  M  L  L  C  A  Y  N  S </first_frame>
            <second_frame>  S  F  G  Q  F  *  V  *  M  L  L  T  T  T  K  Q  S  *  P  Y  *  Q  I  W  S  H  G  H  A  F  H  Q  I  L  C  F  I  *  L  P  T  S  A  K  D  I  Y  H  T  T  I  M  L  K  C  H  F  N  G  *  A  L  G  D  I  L  K  *  A  S  S  F  L  *  H  A  R  M  A  T  S  S  K  *  P  S  K  C  N  I  I  H  I  S  P  *  T  N  H  L  G  E  *  C  E  C  P  I  T  K  S  M  L  C  T  S  N  D  G  *  V  P  R  N  C  V  F  F  R  D  L  L  E  C  N  E  S  I  V  Y  I  S  T  F  *  I  Q  Y  N  *  *  I  A  N  K  G  I  S  V  Q  S  Q  F  D  C  Y  T  M  N  L  F  A  K  I  N  R  L  H  F  T  G  *  I  *  G  T  S  E  G  R  L  I  G  K  *  T  N  P  N  H  V  P  K  H  F  Q  C  F  F  V  L  I  I   </second_frame>
            <third_frame>   L  S  A  S  S  K  F  K  C  F  L  Q  P  L  S  K  A  N  H  I  D  K  F  G  L  M  G  M  L  F  T  K  S  S  A  S  F  N  F  P  L  L  Q  R  I  S  T  I  Q  L  *  C  S  S  V  T  S  M  D  E  L  W  G  I  Y  *  N  K  R  L  P  F  S  S  M  P  E  W  L  Q  A  A  S  N  P  V  N  V  I  S  S  I  S  A  L  E  R  T  I  W  A  N  N  V  S  A  Q  L  P  N  P  C  C  A  H  P  T  M  V  E  F  H  E  T  V  F  F  S  G  I  S  L  N  A  M  S  P  S  F  I  F  P  H  F  E  Y  N  T  T  S  E  L  P  T  K  A  S  V  F  N  P  S  L  T  A  T  P  *  I  S  L  P  R  S  I  D  S  I  S  Q  D  E  F  R  A  L  V  K  E  D  *  L  G  S  R  P  I  L  I  M  S  P  N  T  F  N  A  S  L  C  L  *  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072A04.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28482" stop="28787"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>303</number_coding_nucleotides>
                  <number_encoded_amino_acids>101</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKRLPFSSMPEWLQAASNPVNVISSISALERTIWANNVSAQLPNPCCAHPTMVEFHETVFFSGISLNAMSPSFIFPHFEYNTTSELPTKASVFNPSLTATP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072A04.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28327" stop="28542"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AKLTILTNLVSWACFSPNPLLHLTSHFCKGYLPYNYNAQVSLQWMSFGGYIEISVFLSLACQNGYKQQVTQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="29574" PGL_stop="29008"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29574" e_stop="29008"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="29574" e_stop="29008" e_length="567"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29574" stop="29008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="TG451-F" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGCAGCTGTTTGACAAAATGCCTGTCAAAGATACGGTTATGTGGAACTTGATGATTAAAGGGTGTGTAGAGTGTGGGAATACGGAGATGGGTTTGAAGCTATTTGAAGAAATGACCCAAAGAAATGTAGTTTCGTACACAACGATGATTAGCGGGTATTTGAAGTTTGGAAAGGTTGAAGAGGCTGAGAGTTTGTTTTCGGAGATGCCACAAAGGGATGTGGCAGCTTGGAATGCTATGCTTTATGGGTATTTTGAGAATGGAAGAGTTGAAGAGGCTGTTAAGTTGTTTGAGCTAATGCCTTATAGGAATGTGATTTCGTGGACGTCGGTTATTAGTGGGCTTGATCAGCATGGGAGGAGTGATGAGGCTCTATTGATTTTCAAGAAGATGGTAAATTTCTTTATTGAACCTACTTCTAGTACTTTTGCTTCTGTTATTACAGCTTGTGCTAATGCAAGGGATTTAGGTCTAGGTAGTGAAATTCATGCCTGTGTTGTGAAGCTTGGTTATCAGTATGATACTTATGTCACTGCTTCACTAATCACATTGTATGCTAATTGCATGC</gDNA_template>
            <first_frame> C  S  C  L  T  K  C  L  S  K  I  R  L  C  G  T  *  *  L  K  G  V  *  S  V  G  I  R  R  W  V  *  S  Y  L  K  K  *  P  K  E  M  *  F  R  T  Q  R  *  L  A  G  I  *  S  L  E  R  L  K  R  L  R  V  C  F  R  R  C  H  K  G  M  W  Q  L  G  M  L  C  F  M  G  I  L  R  M  E  E  L  K  R  L  L  S  C  L  S  *  C  L  I  G  M  *  F  R  G  R  R  L  L  V  G  L  I  S  M  G  G  V  M  R  L  Y  *  F  S  R  R  W  *  I  S  L  L  N  L  L  L  V  L  L  L  L  L  L  Q  L  V  L  M  Q  G  I  *  V  *  V  V  K  F  M  P  V  L  *  S  L  V  I  S  M  I  L  M  S  L  L  H  *  S  H  C  M  L  I  A  C </first_frame>
            <second_frame>  A  A  V  *  Q  N  A  C  Q  R  Y  G  Y  V  E  L  D  D  *  R  V  C  R  V  W  E  Y  G  D  G  F  E  A  I  *  R  N  D  P  K  K  C  S  F  V  H  N  D  D  *  R  V  F  E  V  W  K  G  *  R  G  *  E  F  V  F  G  D  A  T  K  G  C  G  S  L  E  C  Y  A  L  W  V  F  *  E  W  K  S  *  R  G  C  *  V  V  *  A  N  A  L  *  E  C  D  F  V  D  V  G  Y  *  W  A  *  S  A  W  E  E  *  *  G  S  I  D  F  Q  E  D  G  K  F  L  Y  *  T  Y  F  *  Y  F  C  F  C  Y  Y  S  L  C  *  C  K  G  F  R  S  R  *  *  N  S  C  L  C  C  E  A  W  L  S  V  *  Y  L  C  H  C  F  T  N  H  I  V  C  *  L  H   </second_frame>
            <third_frame>   Q  L  F  D  K  M  P  V  K  D  T  V  M  W  N  L  M  I  K  G  C  V  E  C  G  N  T  E  M  G  L  K  L  F  E  E  M  T  Q  R  N  V  V  S  Y  T  T  M  I  S  G  Y  L  K  F  G  K  V  E  E  A  E  S  L  F  S  E  M  P  Q  R  D  V  A  A  W  N  A  M  L  Y  G  Y  F  E  N  G  R  V  E  E  A  V  K  L  F  E  L  M  P  Y  R  N  V  I  S  W  T  S  V  I  S  G  L  D  Q  H  G  R  S  D  E  A  L  L  I  F  K  K  M  V  N  F  F  I  E  P  T  S  S  T  F  A  S  V  I  T  A  C  A  N  A  R  D  L  G  L  G  S  E  I  H  A  C  V  V  K  L  G  Y  Q  Y  D  T  Y  V  T  A  S  L  I  T  L  Y  A  N  C  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072A04.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29572" stop="29009"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>564</number_coding_nucleotides>
                  <number_encoded_amino_acids>188</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QLFDKMPVKDTVMWNLMIKGCVECGNTEMGLKLFEEMTQRNVVSYTTMISGYLKFGKVEEAESLFSEMPQRDVAAWNAMLYGYFENGRVEEAVKLFELMPYRNVISWTSVISGLDQHGRSDEALLIFKKMVNFFIEPTSSTFASVITACANARDLGLGSEIHACVVKLGYQYDTYVTASLITLYANCM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="32229" PGL_stop="33466"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="32229" e_stop="32464"/>
            <exon e_start="32684" e_stop="32903"/>
            <exon e_start="33037" e_stop="33082"/>
            <exon e_start="33162" e_stop="33466"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.930" e_score="1.000"/>
          <exon-intron don_prob="0.917" acc_prob="0.953" e_score="1.000"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="32229" e_stop="32464" e_length="236"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="32465" i_stop="32683" i_length="219"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="32684" e_stop="32903" e_length="220"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.930">
            <gDNA_intron_boundary i_start="32904" i_stop="33036" i_length="133"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="33037" e_stop="33082" e_length="46"/>
          </exon>
          <intron i_serial="3" don_prob="0.917" acc_prob="0.953">
            <gDNA_intron_boundary i_start="33083" i_stop="33161" i_length="79"/>
          </intron>
          <exon e_serial="4" e_score="0.990">
            <gDNA_exon_boundary e_start="33162" e_stop="33466" e_length="305"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32229" stop="32464"/>
              <exon start="32684" stop="32903"/>
              <exon start="33037" stop="33082"/>
              <exon start="33162" stop="33169"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="T1654" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32230" stop="32464"/>
              <exon start="32684" stop="32903"/>
              <exon start="33037" stop="33082"/>
              <exon start="33162" stop="33466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="C2_At1g29520" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32230" stop="32464"/>
              <exon start="32684" stop="32903"/>
              <exon start="33037" stop="33082"/>
              <exon start="33162" stop="33466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="U223436" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACATAATCTTCTTAGCCTTTACAACACAAAAAAAGAAAAAAACTTATTCAGTTTTCATCAAAAAGAGGTTTCAAGCCTTACTATCATTATCATTTTCAAGAACCAAGAATGGCTAGTGAGCAGATGAAACCTGTTGCATCTTTGCTTTTGGTCCTTAATTTCTGCATGTATGTTGTTGTTTTAGGTATTGGTGGTTGGGCTATGAACTTTGCCATTGATAATGGTTTTGTCATTG : GTCCAGGAATGAATCTTCCAGCACATTTCTCACCAATTTACTTCCCAATTGGAAATGCTGCCACTGGATTCTTTGTTGTATTTGCTTTGATAGCAGGTGTGGTTGGAGTTGCATCTGTTCTCTCTGGACTTAACCACATTCGCCATTGGAACATCGATAGCTTACCATCTGCTGCTTCTGCTGCTACAATAGCCTGGAGTCTTACAGTCCTTGCCATGGG : CTTTGCTTGGAAAGAAATTGAACTCAACTACAGGAATTCCAAATTG : AAAACAATGGAGGCATTCATGATAATTCTATCATTTACTCAACTGGTATACATAGCTGCCATTCATGGTGCTTCATCAAGGAGATAAATGAGCTTCGAAGATAAATCGTATCGTGTGAAATTTATTGATTGAGACTGTTGTTTCCTTTTCTTTTTTTGTTTTAACAATTGTGTCATTGTATTTATTCATTATTGTGTACACAAAGTTGGCCAGATGGCTGTTTGTATATCAACTATCTTCAGTATTCATATTGTAAGAAACAAATAAGTGATGTACCCTTCATTGGCTTTTTCCCAGAAGAAAAT</gDNA_template>
            <first_frame> N  I  I  F  L  A  F  T  T  Q  K  K  K  K  T  Y  S  V  F  I  K  K  R  F  Q  A  L  L  S  L  S  F  S  R  T  K  N  G  *  *  A  D  E  T  C  C  I  F  A  F  G  P  *  F  L  H  V  C  C  C  F  R  Y  W  W  L  G  Y  E  L  C  H  *  *  W  F  C  H  W :   S  R  N  E  S  S  S  T  F  L  T  N  L  L  P  N  W  K  C  C  H  W  I  L  C  C  I  C  F  D  S  R  C  G  W  S  C  I  C  S  L  W  T  *  P  H  S  P  L  E  H  R  *  L  T  I  C  C  F  C  C  Y  N  S  L  E  S  Y  S  P  C  H  G  :  L  C  L  E  R  N  *  T  Q  L  Q  E  F  Q  I   : E  N  N  G  G  I  H  D  N  S  I  I  Y  S  T  G  I  H  S  C  H  S  W  C  F  I  K  E  I  N  E  L  R  R  *  I  V  S  C  E  I  Y  *  L  R  L  L  F  P  F  L  F  L  F  *  Q  L  C  H  C  I  Y  S  L  L  C  T  Q  S  W  P  D  G  C  L  Y  I  N  Y  L  Q  Y  S  Y  C  K  K  Q  I  S  D  V  P  F  I  G  F  F  P  E  E  N </first_frame>
            <second_frame>  T  *  S  S  *  P  L  Q  H  K  K  R  K  K  L  I  Q  F  S  S  K  R  G  F  K  P  Y  Y  H  Y  H  F  Q  E  P  R  M  A  S  E  Q  M  K  P  V  A  S  L  L  L  V  L  N  F  C  M  Y  V  V  V  L  G  I  G  G  W  A  M  N  F  A  I  D  N  G  F  V  I   : G  P  G  M  N  L  P  A  H  F  S  P  I  Y  F  P  I  G  N  A  A  T  G  F  F  V  V  F  A  L  I  A  G  V  V  G  V  A  S  V  L  S  G  L  N  H  I  R  H  W  N  I  D  S  L  P  S  A  A  S  A  A  T  I  A  W  S  L  T  V  L  A  M  G :   F  A  W  K  E  I  E  L  N  Y  R  N  S  K  L  :  K  T  M  E  A  F  M  I  I  L  S  F  T  Q  L  V  Y  I  A  A  I  H  G  A  S  S  R  R  *  M  S  F  E  D  K  S  Y  R  V  K  F  I  D  *  D  C  C  F  L  F  F  F  C  F  N  N  C  V  I  V  F  I  H  Y  C  V  H  K  V  G  Q  M  A  V  C  I  S  T  I  F  S  I  H  I  V  R  N  K  *  V  M  Y  P  S  L  A  F  S  Q  K  K   </second_frame>
            <third_frame>   H  N  L  L  S  L  Y  N  T  K  K  E  K  N  L  F  S  F  H  Q  K  E  V  S  S  L  T  I  I  I  I  F  K  N  Q  E  W  L  V  S  R  *  N  L  L  H  L  C  F  W  S  L  I  S  A  C  M  L  L  F  *  V  L  V  V  G  L  *  T  L  P  L  I  M  V  L  S  L  :  V  Q  E  *  I  F  Q  H  I  S  H  Q  F  T  S  Q  L  E  M  L  P  L  D  S  L  L  Y  L  L  *  *  Q  V  W  L  E  L  H  L  F  S  L  D  L  T  T  F  A  I  G  T  S  I  A  Y  H  L  L  L  L  L  L  Q  *  P  G  V  L  Q  S  L  P  W   : A  L  L  G  K  K  L  N  S  T  T  G  I  P  N  * :   K  Q  W  R  H  S  *  *  F  Y  H  L  L  N  W  Y  T  *  L  P  F  M  V  L  H  Q  G  D  K  *  A  S  K  I  N  R  I  V  *  N  L  L  I  E  T  V  V  S  F  S  F  F  V  L  T  I  V  S  L  Y  L  F  I  I  V  Y  T  K  L  A  R  W  L  F  V  Y  Q  L  S  S  V  F  I  L  *  E  T  N  K  *  C  T  L  H  W  L  F  P  R  R  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072A04.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32245" stop="32464"/>
                    <exon start="32684" stop="32903"/>
                    <exon start="33037" stop="33082"/>
                    <exon start="33162" stop="33248"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>570</number_coding_nucleotides>
                  <number_encoded_amino_acids>190</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PLQHKKRKKLIQFSSKRGFKPYYHYHFQEPRMASEQMKPVASLLLVLNFCMYVVVLGIGGWAMNFAIDNGFVIGPGMNLPAHFSPIYFPIGNAATGFFVVFALIAGVVGVASVLSGLNHIRHWNIDSLPSAASAATIAWSLTVLAMGFAWKEIELNYRNSKLKTMEAFMIILSFTQLVYIAAIHGASSRR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="48976" PGL_stop="59083"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="48976" e_stop="49082"/>
            <exon e_start="54840" e_stop="54962"/>
            <exon e_start="56590" e_stop="56655"/>
            <exon e_start="56994" e_stop="57143"/>
            <exon e_start="58064" e_stop="58165"/>
            <exon e_start="58283" e_stop="58480"/>
            <exon e_start="58584" e_stop="58646"/>
            <exon e_start="58734" e_stop="58838"/>
            <exon e_start="59054" e_stop="59083"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.984" acc_prob="0.970" e_score="0.925"/>
          <exon-intron don_prob="0.312" acc_prob="0.998" e_score="0.976"/>
          <exon-intron don_prob="1.000" acc_prob="0.831" e_score="0.985"/>
          <exon-intron don_prob="0.996" acc_prob="0.000" e_score="0.980"/>
          <exon-intron don_prob="0.781" acc_prob="0.885" e_score="0.980"/>
          <exon-intron don_prob="0.982" acc_prob="0.870" e_score="0.970"/>
          <exon-intron don_prob="0.984" acc_prob="0.983" e_score="0.984"/>
          <exon-intron don_prob="0.993" acc_prob="0.995" e_score="0.914"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.925">
            <gDNA_exon_boundary e_start="48976" e_stop="49082" e_length="107"/>
          </exon>
          <intron i_serial="1" don_prob="0.984" acc_prob="0.970">
            <gDNA_intron_boundary i_start="49083" i_stop="54839" i_length="5757"/>
          </intron>
          <exon e_serial="2" e_score="0.976">
            <gDNA_exon_boundary e_start="54840" e_stop="54962" e_length="123"/>
          </exon>
          <intron i_serial="2" don_prob="0.312" acc_prob="0.998">
            <gDNA_intron_boundary i_start="54963" i_stop="56589" i_length="1627"/>
          </intron>
          <exon e_serial="3" e_score="0.985">
            <gDNA_exon_boundary e_start="56590" e_stop="56655" e_length="66"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.831">
            <gDNA_intron_boundary i_start="56656" i_stop="56993" i_length="338"/>
          </intron>
          <exon e_serial="4" e_score="0.980">
            <gDNA_exon_boundary e_start="56994" e_stop="57143" e_length="150"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.000">
            <gDNA_intron_boundary i_start="57144" i_stop="58063" i_length="920"/>
          </intron>
          <exon e_serial="5" e_score="0.980">
            <gDNA_exon_boundary e_start="58064" e_stop="58165" e_length="102"/>
          </exon>
          <intron i_serial="5" don_prob="0.781" acc_prob="0.885">
            <gDNA_intron_boundary i_start="58166" i_stop="58282" i_length="117"/>
          </intron>
          <exon e_serial="6" e_score="0.970">
            <gDNA_exon_boundary e_start="58283" e_stop="58480" e_length="198"/>
          </exon>
          <intron i_serial="6" don_prob="0.982" acc_prob="0.870">
            <gDNA_intron_boundary i_start="58481" i_stop="58583" i_length="103"/>
          </intron>
          <exon e_serial="7" e_score="0.984">
            <gDNA_exon_boundary e_start="58584" e_stop="58646" e_length="63"/>
          </exon>
          <intron i_serial="7" don_prob="0.984" acc_prob="0.983">
            <gDNA_intron_boundary i_start="58647" i_stop="58733" i_length="87"/>
          </intron>
          <exon e_serial="8" e_score="0.914">
            <gDNA_exon_boundary e_start="58734" e_stop="58838" e_length="105"/>
          </exon>
          <intron i_serial="8" don_prob="0.993" acc_prob="0.995">
            <gDNA_intron_boundary i_start="58839" i_stop="59053" i_length="215"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="59054" e_stop="59083" e_length="30"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48976" stop="49082"/>
              <exon start="54840" stop="54962"/>
              <exon start="56590" stop="56655"/>
              <exon start="56994" stop="57143"/>
              <exon start="58064" stop="58165"/>
              <exon start="58283" stop="58480"/>
              <exon start="58584" stop="58646"/>
              <exon start="58734" stop="58838"/>
              <exon start="59054" stop="59083"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="C2_At4g18060" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAATCAAATCCCAAAAATCGTGAAATCCAGCGGCAAAGATTACAGCCATGGATGCTTTGAGAAAGCAAGCTAGTAAGCTCAGAGAACAAGTCGCTAAACAGCAACAG : GCAGTCATCAAGCAGTTTAGTGCAACTGGTTATGAAAGTTCAGATGTTATGGTCATCGATGAAATGGAAATGCAATTGCATCATCAACTGGACAAGTTGTATAAGTCTACCCGGGAGAAAAGG : GATTTTCAGAAAGAGATTGTTAAGGCAGCTGAAACATTTACAGCTATAGGATACAAGCATATAGAA : CCAGGAACTAAATTATCAGAAGATTGCTGCAAATATGGAGTTGAAAATCCCAATGACGAGGTGTTAGCTAAGGCTGCTTCTATTTACGGCGATGCTCGTAAGCATGCAGAGAAGGAGGTTGAAGATCTAAATAAACTATTCTTCAGTCAG : GTACTGGAACCATTGAGAGCTATGGTAGCTGGTTCTCCCTTAGAGGATGCTCGTCATCTAGCTCAGCGCTACAGTAAAATGCGGCAAGAGGCGGAGATACAG : GCAACCGAAGTTTCTAGAAGACAAGCTCGGGTGAGGGAAGCTCCCATCCCGGAGAATGTGGCAAAGCTGCACTCAGCAGAAACTAAAATGCAGGAACTCAAAGCCAACATGACAGTACTCGGTAAAGAAGCAGCAGCAGCATTAGCTGCTGTAGAATCACAGCAGGAGAGGCTTACATTTCAGAGGCTTGTTGCAATG : GTTGAAGCAGAAAAGCTTTATCATGAGAGAGTTGCTGTTATTCTGGGTAATATTGAAGCTGAG : ATAGTTTCTGAAAAGCAGCGAAAAGAGGCTGCTCCTCCTGTAGCCACACTTCCTGTTAACCCTCCGGCCCAAATACCTGAGAAAACAAAATACTTTTTGGCCGAG : GCTATTCATTCTTTTGAAGCTGAATCAGAA</gDNA_template>
            <first_frame> K  S  N  P  K  N  R  E  I  Q  R  Q  R  L  Q  P  W  M  L  *  E  S  K  L  V  S  S  E  N  K  S  L  N  S  N  R :   Q  S  S  S  S  L  V  Q  L  V  M  K  V  Q  M  L  W  S  S  M  K  W  K  C  N  C  I  I  N  W  T  S  C  I  S  L  P  G  R  K  G :   I  F  R  K  R  L  L  R  Q  L  K  H  L  Q  L  *  D  T  S  I  *  N :   Q  E  L  N  Y  Q  K  I  A  A  N  M  E  L  K  I  P  M  T  R  C  *  L  R  L  L  L  F  T  A  M  L  V  S  M  Q  R  R  R  L  K  I  *  I  N  Y  S  S  V  R :   Y  W  N  H  *  E  L  W  *  L  V  L  P  *  R  M  L  V  I  *  L  S  A  T  V  K  C  G  K  R  R  R  Y  R :   Q  P  K  F  L  E  D  K  L  G  *  G  K  L  P  S  R  R  M  W  Q  S  C  T  Q  Q  K  L  K  C  R  N  S  K  P  T  *  Q  Y  S  V  K  K  Q  Q  Q  H  *  L  L  *  N  H  S  R  R  G  L  H  F  R  G  L  L  Q  W :   L  K  Q  K  S  F  I  M  R  E  L  L  L  F  W  V  I  L  K  L  R :   *  F  L  K  S  S  E  K  R  L  L  L  L  *  P  H  F  L  L  T  L  R  P  K  Y  L  R  K  Q  N  T  F  W  P  R :   L  F  I  L  L  K  L  N  Q   </first_frame>
            <second_frame>  N  Q  I  P  K  I  V  K  S  S  G  K  D  Y  S  H  G  C  F  E  K  A  S  *  *  A  Q  R  T  S  R  *  T  A  T   : G  S  H  Q  A  V  *  C  N  W  L  *  K  F  R  C  Y  G  H  R  *  N  G  N  A  I  A  S  S  T  G  Q  V  V  *  V  Y  P  G  E  K   : G  F  S  E  R  D  C  *  G  S  *  N  I  Y  S  Y  R  I  Q  A  Y  R   : T  R  N  *  I  I  R  R  L  L  Q  I  W  S  *  K  S  Q  *  R  G  V  S  *  G  C  F  Y  L  R  R  C  S  *  A  C  R  E  G  G  *  R  S  K  *  T  I  L  Q  S   : G  T  G  T  I  E  S  Y  G  S  W  F  S  L  R  G  C  S  S  S  S  S  A  L  Q  *  N  A  A  R  G  G  D  T   : G  N  R  S  F  *  K  T  S  S  G  E  G  S  S  H  P  G  E  C  G  K  A  A  L  S  R  N  *  N  A  G  T  Q  S  Q  H  D  S  T  R  *  R  S  S  S  S  I  S  C  C  R  I  T  A  G  E  A  Y  I  S  E  A  C  C  N   : G  *  S  R  K  A  L  S  *  E  S  C  C  Y  S  G  *  Y  *  S  *   : D  S  F  *  K  A  A  K  R  G  C  S  S  C  S  H  T  S  C  *  P  S  G  P  N  T  *  E  N  K  I  L  F  G  R   : G  Y  S  F  F  *  S  *  I  R  </second_frame>
            <third_frame>   I  K  S  Q  K  S  *  N  P  A  A  K  I  T  A  M  D  A  L  R  K  Q  A  S  K  L  R  E  Q  V  A  K  Q  Q  Q  :  A  V  I  K  Q  F  S  A  T  G  Y  E  S  S  D  V  M  V  I  D  E  M  E  M  Q  L  H  H  Q  L  D  K  L  Y  K  S  T  R  E  K  R  :  D  F  Q  K  E  I  V  K  A  A  E  T  F  T  A  I  G  Y  K  H  I  E  :  P  G  T  K  L  S  E  D  C  C  K  Y  G  V  E  N  P  N  D  E  V  L  A  K  A  A  S  I  Y  G  D  A  R  K  H  A  E  K  E  V  E  D  L  N  K  L  F  F  S  Q  :  V  L  E  P  L  R  A  M  V  A  G  S  P  L  E  D  A  R  H  L  A  Q  R  Y  S  K  M  R  Q  E  A  E  I  Q  :  A  T  E  V  S  R  R  Q  A  R  V  R  E  A  P  I  P  E  N  V  A  K  L  H  S  A  E  T  K  M  Q  E  L  K  A  N  M  T  V  L  G  K  E  A  A  A  A  L  A  A  V  E  S  Q  Q  E  R  L  T  F  Q  R  L  V  A  M  :  V  E  A  E  K  L  Y  H  E  R  V  A  V  I  L  G  N  I  E  A  E  :  I  V  S  E  K  Q  R  K  E  A  A  P  P  V  A  T  L  P  V  N  P  P  A  Q  I  P  E  K  T  K  Y  F  L  A  E  :  A  I  H  S  F  E  A  E  S  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072A04.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48999" stop="49082"/>
                    <exon start="54840" stop="54962"/>
                    <exon start="56590" stop="56655"/>
                    <exon start="56994" stop="57143"/>
                    <exon start="58064" stop="58165"/>
                    <exon start="58283" stop="58480"/>
                    <exon start="58584" stop="58646"/>
                    <exon start="58734" stop="58838"/>
                    <exon start="59054" stop="59083"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>921</number_coding_nucleotides>
                  <number_encoded_amino_acids>307</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NPAAKITAMDALRKQASKLREQVAKQQQAVIKQFSATGYESSDVMVIDEMEMQLHHQLDKLYKSTREKRDFQKEIVKAAETFTAIGYKHIEPGTKLSEDCCKYGVENPNDEVLAKAASIYGDARKHAEKEVEDLNKLFFSQVLEPLRAMVAGSPLEDARHLAQRYSKMRQEAEIQATEVSRRQARVREAPIPENVAKLHSAETKMQELKANMTVLGKEAAAALAAVESQQERLTFQRLVAMVEAEKLYHERVAVILGNIEAEIVSEKQRKEAAPPVATLPVNPPAQIPEKTKYFLAEAIHSFEAESE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 18 chains have been computed
$ 
$ memory statistics:
$ 15992 bytes spliced alignments in total
$ 7 spliced alignments have been stored
$ 2284 bytes was the average size of a spliced alignment
$ 10872 bytes predicted gene locations in total
$ 5 predicted gene locations have been stored
$ 2174 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 19 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 09:02:07
-->
