<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 08:50:23"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0073P13-KF91y/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588481" ref_strand="+" ref_description="SGN-U588481 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>caaaacgaaacacaatgcatttagataaccagagggggtctgaacttacaatcaaggaaagaagtaagatcttgccaaaaaccaattcacaaagttttttttgttatctgacaaaagagaaacttttcatatttccccaccaaaatcggggacaaaatttatttccaaacagcctatttttcaatcagatcaccacttttttatctacatgttaaagagcttatcagttgtcaccctagaattttaaaagggaggggggggaaaaagaacaggggaaaaaaaataatcaaattaatcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0073P13.2" temp_strand="-" temp_description="C02HBa0073P13.2  AC215377.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0073P13 sequenced_by:kribb upload_account_name:korea">
        <position start="3115" stop="2218"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2815" g_stop="2518" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="298" r_length="298" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0073P13.2" gen_strand="-" ref_id="SGN-U588481" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>298</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0073P13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U588481" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2815" e_stop="2518"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAACGAAACACAATGCATTTAGATAACCAGAGGGAGTCTGAACTTACAATCAAGGAAAGAAGTAAGATCATGCCAGAAAACAATTCACAAAGTTCTTTATGTTATCTCACAAAAGAGAAACTATTCATATTTCCCCACCAAAATCAGGGACAAAATATATATACAAACAGCCTATTCTTCAATCAGATCACCACTTTTCTATCTACATGTTAAAGAGCTTATCAGTTGTCACCCTAGAATCTTAGAATGGAGGTGGGGGAAAAAGAACAAGGAGAAAAAAATAATCAAATTAATCG</genome_strand>
        <mrna_strand>CAAAACGAAACACAATGCATTTAGATAACCAGAGGGGGTCTGAACTTACAATCAAGGAAAGAAGTAAGATCTTGCCAAAAACCAATTCACAAAGTTTTTTTTGTTATCTGACAAAAGAGAAACTTTTCATATTTCCCCACCAAAATCGGGGACAAAATTTATTTCCAAACAGCCTATTTTTCAATCAGATCACCACTTTTTTATCTACATGTTAAAGAGCTTATCAGTTGTCACCCTAGAATTTTAAAAGGGAGGGGGGGGAAAAAGAACAGGGGAAAAAAAATAATCAAATTAATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588482" ref_strand="+" ref_description="SGN-U588482 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ncaaaacgaaacacaatgcatttagataaccagagggggtctgaacttacaatcaaggaaagaagtaagatcatgccaaaaaacaattcacaaagttctttatgttatctcacaaaagagaaactattcatatttccccaccaaaatcagggacaaattttttttccaacccgcctattcttcaatcagatcaccacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0073P13.2" temp_strand="-" temp_description="C02HBa0073P13.2  AC215377.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0073P13 sequenced_by:kribb upload_account_name:korea">
        <position start="3115" stop="2317"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2816" g_stop="2617" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="200" r_length="200" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0073P13.2" gen_strand="-" ref_id="SGN-U588482" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>200</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0073P13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U588482" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2816" e_stop="2617"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAACGAAACACAATGCATTTAGATAACCAGAGGGAGTCTGAACTTACAATCAAGGAAAGAAGTAAGATCATGCCAGAAAACAATTCACAAAGTTCTTTATGTTATCTCACAAAAGAGAAACTATTCATATTTCCCCACCAAAATCAGGGACAAAATATATATACAAACAGCCTATTCTTCAATCAGATCACCACTTT</genome_strand>
        <mrna_strand>NCAAAACGAAACACAATGCATTTAGATAACCAGAGGGGGTCTGAACTTACAATCAAGGAAAGAAGTAAGATCATGCCAAAAAACAATTCACAAAGTTCTTTATGTTATCTCACAAAAGAGAAACTATTCATATTTCCCCACCAAAATCAGGGACAAATTTTTTTTCCAACCCGCCTATTCTTCAATCAGATCACCACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U564395" ref_strand="+" ref_description="SGN-U564395 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|59798467|sp|Q8VWY6|POLC1_TOBAC (e_value=3e-37) Polcalcin; (*ATH) AT3G03430.1 (e_value=1e-25)  Symbol: None | polcalcin, putative / calcium-binding pollen allergen, putative, almost identical to polcalcin Bra r 2/Bra n 2 (calcium-binding pollen allergen Bra r 2/Bra n 2) SP:Q39406 from (Brassica napus) | chr3:814480-814739 FORWARD | Aliases: T... ; (*SWP) sp|Q8VWY6|POLC1_TOBAC (e_value=2e-38) Polcalcin Nic t 1 OS=Nicotiana tabacum GN=Nict1; ">
      <seq>gcacgaggaaaaacaaaaactcagaccaactttgcctacattataaccatcacaaaagaaaaaggcaaagaagaaatcaaagaatggctgaagatccacaagacgtagccgatcgcgaactagtcttcaagcgttttgatttaaatggtgatgggcaaatttcttcagcagaacttggagagaccttgaagatgctaggctctgtaacctctgaagaagtccagtatatgatggctgaacttgatactgatggggatggcttcatttcttttaaagaattcgaagaatttgctcgagccaatagaggtttgatcaaggatgttgctaaagtattctagctttcttgatgcacaaacttaaccattagaaaccgatttagggtgggttttgcaggttcaactgaatccattgctttcagctcgaactatgtatacgtatgcaaaatatgtttaaaatgtatacatacaataaaatcatactcattttgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0073P13.2" temp_strand="-" temp_description="C02HBa0073P13.2  AC215377.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0073P13 sequenced_by:kribb upload_account_name:korea">
        <position start="4443" stop="3361"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4152" g_stop="3654" g_length="499"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="497" r_length="497" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0073P13.2" gen_strand="-" ref_id="SGN-U564395" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>499</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0073P13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U564395" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4152" e_stop="3654"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGTTGCCAAAAACAAAAACTCAGACCAACTTTGCCTACATTATAACCATCGCAAAAGAAAAAGGCAAAGAAGAAATCAAAGAATGGCTGAAGATCCACAAGACGTAGCCGATCGCGAACTAGTCTTCAAGCGTTTTGATTTAAATGGTGATGGGCAAATTTCTTCAGCAGAACTTGGAGAGGCCTTGAAGATGCTAGGCTCTGTAACCTCTGAAGAAGTCCAGTATATGATGGCTGAACTTGATACTGATGGGGATGGCTTCATTTCTTTTAAAGAATTCGAAGAATTTGCTCGAGCCAATAGAGGTTTGATCAAGGATGTTGCTAAAGTATTCTAGCTTTCTTGATGCACAAACTTAACCATTAGAAACCGATTTTAGGTGGTTTTTGCAGGTTCAAACTGAATCCATTGCTTTCAGCTCGAACTATGTATACGAATGCAACATATGTTTAAAATGTATACATATAATAAAATCATACTCATTTTGAAATCATCGA</genome_strand>
        <mrna_strand>GCACGAG-GAAAAACAAAAACTCAGACCAACTTTGCCTACATTATAACCATCACAAAAGAAAAAGGCAAAGAAGAAATCAAAGAATGGCTGAAGATCCACAAGACGTAGCCGATCGCGAACTAGTCTTCAAGCGTTTTGATTTAAATGGTGATGGGCAAATTTCTTCAGCAGAACTTGGAGAGACCTTGAAGATGCTAGGCTCTGTAACCTCTGAAGAAGTCCAGTATATGATGGCTGAACTTGATACTGATGGGGATGGCTTCATTTCTTTTAAAGAATTCGAAGAATTTGCTCGAGCCAATAGAGGTTTGATCAAGGATGTTGCTAAAGTATTCTAGCTTTCTTGATGCACAAACTTAACCATTAGAAACCGATTTAGGGTGGGTTTTGCAGGTTC-AACTGAATCCATTGCTTTCAGCTCGAACTATGTATACGTATGCAAAATATGTTTAAAATGTATACATACAATAAAATCATACTCATTTTGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570882" ref_strand="+" ref_description="SGN-U570882 Tomato 200607#2 [82 ESTs aligned] (*GB) gi|38604456|gb|AAR24912.1| (e_value=6e-170) fructokinase 3 [Lycopersicon esculentum]; (*ATH) AT1G66430.1 (e_value=5e-135) | Symbol: None | pfkB-type carbohydrate kinase family protein, contains Pfam profile: PF00294 pfkB family carbohydrate kinase | chr1:24781959-24784278 FORWARD | Aliases: F28G11.11, F28G11_11; (*SWP) sp|O82616|SCRK5_ARATH (e_value=5e-98) Putative fructokinase-5 OS=Arabidopsis thaliana GN=At4g10260; ">
      <seq>agcactaataagcaagtgggtaaatcatgatttttgtctgacaagtgacagggataactagaggtcgtcgtcggctagtctttgggccatccaacaaaacaaaacttgtatgttagccaatttcgattcattgatttctccgctgctactattttccccaacagaaagaattgcttcaaaattagggtttattgcctgaaaattactagttttacaacgattgctccaataccttctcctaatttccattttagttgctgaaattttgacgcctgatgtaactgtattttaggttttaattgtgaaatacgagtttctcagatcagatcagttcctctggtttttttactttctaataaatggctcttcatgctactgctttctccttcactggagtttctacttcaagtaaatcttccagaagcgctttgctttcagtctttcctcttcctagaagatgcactgtcaaagcaacttcccagtatccgcacagctttcctcgatgtaaaatccaaggaagagcattgccaagtgacaatgggctagtggagaaggatgaatcttctcttgttgtgtgctttggagaaatgctcattgattttgttccgactacaagtgggctttcattggctgaagctcctgcatttaaaaaggctcctggtggtgcaccagctaatgttgctgttggtatttcccgtcttggtggttcatcagctttcattggcaaggttggtgaagacgaatttggttacatgcttgctgagattttgaaggagaacaatgtcaacagtgatggtatgcgatttgatccaggtgctcgcactgctttagcatttgtaacactgagaaaggatggagaacgtgaatttatgttctatcgtaacccaagtgctgatatgttgcttcaagaggatgaacttgatttagagttgatcaggaaggcaaaagtttttcattatggttccataagtctgattacggagccatgcaaatcagcccatattgcagctgcaaaagctgcaaaggatgctggtgtgatcttatcctatgatcccaatttgaggcttccattgtggccatctgcagaaagtgctagagaaggaatccttagcatatggaatactgctgatataattaagataagtgaagaagagatttcgtttttgacacaaggagaagatccttatgatgataatgttgtccgtaagttgtaccatccaaacctcaagttactcctcgtcacagaaggtccagaaggttgccgatattacaccaaggatttcagtggacgagttaagggtataaaggtggacgctgtggacaccacaggtgctggagatgcttttgtagccggaatattgtcacagctagcatctgatgtctctctgcttcaggatgagggcaagcttcgagatgcccttagttttgctaatgcctgtggtgcattgaccgtgatggagagaggagcaattccagctttgcctacaaaagaagtagtgttgaacgccttgctcaagtcagttgcataatatccatccgacctattaatcggttgccatttaaatgcacttgcaaaaagatctccatgtgctccttgcatagttcttgtagggtaaaagaatattgtataaccacattagccaataatcgagaataatttctgataaatatgtggtagttcataacccacattattaagcacatgtatttattcaagatcaatgttcaattcttttgggtaatgcattggtttgattcagtcatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0073P13.2" temp_strand="-" temp_description="C02HBa0073P13.2  AC215377.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0073P13 sequenced_by:kribb upload_account_name:korea">
        <position start="9531" stop="4134"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9231" g_stop="8716" g_length="516"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="516" r_length="516" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8715" i_stop="8593" i_length="123">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8592" g_stop="8381" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="517" r_stop="728" r_length="212" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="8380" i_stop="7553" i_length="828">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="7552" g_stop="7340" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="729" r_stop="941" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="7339" i_stop="6812" i_length="528">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="6811" g_stop="6614" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="942" r_stop="1139" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="6613" i_stop="6472" i_length="142">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="6471" g_stop="6334" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1140" r_stop="1277" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="6333" i_stop="5611" i_length="723">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.928" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="5610" g_stop="5494" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1278" r_stop="1394" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="5493" i_stop="4806" i_length="688">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="4805" g_stop="4434" g_length="372"/>
          <reference_exon_boundary r_type="cDNA" r_start="1395" r_stop="1766" r_length="372" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0073P13.2" gen_strand="-" ref_id="SGN-U570882" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1766</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0073P13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U570882" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9231" e_stop="8716"/>
          <exon e_start="8592" e_stop="8381"/>
          <exon e_start="7552" e_stop="7340"/>
          <exon e_start="6811" e_stop="6614"/>
          <exon e_start="6471" e_stop="6334"/>
          <exon e_start="5610" e_stop="5494"/>
          <exon e_start="4805" e_stop="4434"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCACTAATAAGCAAGTGGGTAAATCATGATTTTTGTCTGACAAGTGACAGGGATAACTAGAGGTCGTCGTCGGCTAGTCTTTGGGCCATCCAACAAAACAAAACTTGTATGTTAGCCAATTTCGATTCATTGATTTCTCCGCTGCTACTATTTTCCCCAACAGAAAGAATTGCTTCAAAATTAGGGTTTATTGCCTGAAAATTACTAGTTTTACAACGATTGCTCCAATACCTTCTCCTAATTTCCATTTTAGTTGCTGAAATTTTGACGCCTGATGTAACTGTATTTTAGGTTTTAATTGTGAAATACGAGTTTCTCAGATCAGATCAGTTCCTCTGGTTTTTTTACTTTCTAATAAATGGCTCTTCATGCTACTGCTTTCTCCTTCACTGGAGTTTCTACTTCAAGTAAATCTTCCAGAAGCGCTTTGCTTTCAGTCTTTCCTCTTCCTAGAAGATGCACTGTCAAAGCAACTTCCCAGTATCCGCACAGCTTTCCTCGATGTAAAATCCAAGGTGTTCATCTTTTTAAATTTAGTCTACTTTCAGAAGACTGGATTTATCATTTATATGTGTTTGTTGAAAATTAGTTAATTTTGTATTTTGTACTTTCTTCTTCAACTATATTTTTACTTTAAGGAAGAGCATTGCCAAGTGACAATGGGCTAGTGGAGAAGGATGAATCTTCTCTTGTTGTGTGCTTTGGAGAAATGCTCATTGATTTTGTTCCGACTACAAGTGGGCTTTCATTGGCTGAAGCTCCTGCATTTAAAAAGGCTCCTGGTGGTGCACCAGCTAATGTTGCTGTTGGTATTTCCCGTCTTGGTGGTTCATCAGCTTTCATTGGCAAGGTATAATTTTGCAAAACTACTTTTTTTTTACCTTCTATATGAATTCGATGTGCTAAACGTAGGTTTGAATGAATCTATAACAGTAGATAAGTTCATTGAAGTTCAACAAGTGTTTAGACAGTTAGTTTTTCGGTCAAGTACATGTATGATCTTGAAGTTAGGCTACTTATCTTGACTATTAGGACCAATTCCAGGCTGTAGGAGGAGGAAACTCTTTGTTGTTGTTTAGTTTCCTCTATTCAAAACATATGACAGTGTCTGGTTACGGAAATAACATTAGAAGCTGCAAGACAATTCACTTAGTTGGAACAATCAATCTTTAATGCATGGTTGAAATTTTGTTATATCTGAATAGAAATCTGAAACTTGCTGTGGAAACATCAGTTGCTCCAACGTATCCCGTGTACCATGGTGATCCGACATCTAATGTTATGTGCTTGTCAAATACCTATTTCTTTGGCATACTAATTACAATAATGATATCATATATCTTAGTCTATATCATTAATGAAGAACAGCTTTGCTCTCATCCTTGACTCACTACTCTGAACTACTGCACTCAAATCAGGAAACTCATCTTAATATGCAGCAGGGTCATCTTTGTTCTGCTCAGGAGGTTTTTGATAATTTGATTGGCTGTTGAAGAATCATATTCCACAAAATTTGATTGACTTGAGATTATGTGAATGAAAATAATCTATCAAAAAGAGTACGTGAAGATGGGTCGTCAAAACGAATATGTGAAGATGTTATAAATTACAAAAGCATAGGCCTTTTCAAATATTTAAGCATTTTATGATATGTACTTATAATTTGTAATCCAATCAGGTTGGTGAAGACGAATTTGGTTACATGCTTGCTGAGATTTTGAAGGAGAACAATGTCAACAGTGATGGTATGCGATTTGATCCAGGTGCTCGCACTGCTTTAGCATTTGTAACACTGAGAAAGGATGGAGAACGTGAATTTATGTTCTATCGTAACCCAAGTGCTGATATGTTGCTTCAAGAGGATGAACTTGATTTAGAGTTGATCAGGAAGGTAATGAGGTTCTTTTATCCTTGAGATATAAGTAGTAGTTCATAGTTTCATTATAGCAAAAGAATAAAGAGGGACGAGAAGAGCAAAATATAGGATCATAATTTGAAACTGAAATTGGTTATGGTTTTTCATGAGATACCTCCAGTCATAAGACCTTCTGTGTTCATCCTCTTTGTTACTTCTGCTAAGAGTAAGTTACTTATTTATATGACTATTGAATATATTAAAAACCTTATGCAGTTCATGATTTGGTTCAAGAGTACCTTCCAATCCAAATCTTCAGATTTTTAAAGACCATCTGATTTGAGAATGTATGAGCATTTTGTATGCTTTCTGGAAAGCATGTTATTCTAGTAGTCCGCCAAACCTTAACAATACTTCTATACAATGTTGTTTTCCTTATTGCAACAGTTTGATCATGATACTTAACATTTCTTCTGCTGTTTTTGGTGTGGACTCTTACTAGTAAATTATACTTAGATGGTCAATTTGATAGTGATACCCAATGATTCCTATTCCGTATGACAGGCAAAAGTTTTTCATTATGGTTCCATAAGTCTGATTACGGAGCCATGCAAATCAGCCCATATTGCAGCTGCAAAAGCTGCAAAGGATGCTGGTGTGATCTTATCCTATGATCCCAATTTGAGGCTTCCATTGTGGCCATCTGCAGAAAGTGCTAGAGAAGGAATCCTTAGCATATGGAATACTGCTGATATAATTAAGGTACTTTGTTGCAAATGTCCAATGTAAAATTTTACTACTTGTTAATGGAAATATATTTTATCTTGCAAGAGAGTCGGTCTGGAGAGTCTGAATTTTCATATGCAATGTTACCTATGATGTTTCAGCTGCTTGTTATCAACAGATAAGTGAAGAAGAGATTTCGTTTTTGACACAAGGAGAAGATCCTTATGATGATAATGTTGTCCGTAAGTTGTACCATCCAAACCTCAAGTTACTCCTCGTCACAGAAGGTCCAGAAGGTTGCCGATATTACACCAAGGTGAGCTTCTAAGATGTGGTAAAACTCAGCGTTATAAATATTATTCAACTCTGCTGCATGCCTGTTTGTTCTTCTAGACAAACTGTAATTGTTACTGCATCCCACTCTACACAATTGATGTGCTTAAGCAAATGATGTGGTAATTCTTTATCATGTAGTTGAGAAATCTCTGTATTTGTTCCTTTATGTCTTCAGATGTAAAATTCATCTTTCATAACTTCTTAGACTATTTCAACATTTATTAAATATACAATCTGCTGTTGGGTTACCAAGATTTGTGCGCATGGATGCTTTGCCTTTTTAACCAGTCGATCCCTAGCTGAACAAGTATATGATTATCTATGTTAGAGTTGATTGGCTTGTTGCTTTATTAATCTAGAATCAATATAGATTCATCACAGAAGGACTTAATCAATTGCTCTGTTATACCTGTAAAAATATTACTGATAATAATCCCTTGCTCTCTCTTCATCAAAAAAAAGTCCCTTGCTCTCTGAAGTTTATTTTAGAAGATTCTTTATTCGGTTTTCTTTTGTGATACATGATCAGGAAACAGAATGACTACTGTTTCTTCTATTTTCTTGAAAAGCTAATTAGAGGTTGTCTGATTAGGAATACTAGAATTTAAGCTGATGTTGCATACCCAGATTTGCCAGATACCACTATATATGAAAGGTAAAAAGAAAAGAGTTCTCTGATGTTGCTTTGAATCATGAAAAATAGGATTTCAGTGGACGAGTTAAGGGTATAAAGGTGGACGCTGTGGACACCACAGGTGCTGGAGATGCTTTTGTAGCCGGAATATTGTCACAGCTAGCATCTGATGTCTCTCTGCTTCAGGTATTGCCTTAATGCCTTTTGTATTAAAGCGAATTATGTTCTGTAGTTTTAATGTTCCATTATCCTGCATTCTGTTGGCTACCACTTTACATTTCTCATTGTGTAGATGGTTTCTCATGTCATGTTATCTAATGAGCAAAGAAAAATTGACACTGTCTATAGTTTGTTCACTAGGTGTGTATCTTCAGTATAAGTACATTAAAGGACCTATGTGATTTACTTGTAGTGACTATATTTTACTGTGTCATTGAAACCTCTTATAGTTAATACCCTAGATAATGTCACTCACATATGCAATCCAGTGATATAAGGCAGCTGAAAGATCACAAGTTTAACAACTGTCATCTTTGATGAAGCTAAGACCACTACTAAGACAATGTCGCATCCTTGTTCTCTTGCTGTAGCTACTTCTGAAACAAAAACTGAAGGTGCTGAACCAATTAATTTGAATTCTCAATGTAAGATTGAAAAGTCTCATATCGGTGGTTAATGATATGAGTGGTATACTGATATGGACTTAGGCAATCCTCCTCTCATGAGCTAGCTTTTGGGGTTGAGTTAAAGCCCAAGACCCATTTCCTTACTCTCAAACATCAACCTGTCTTTCCATTTGGTGTTGAACTTTCTTTATACTTTAAAGTCAAAGCACAGATCCCTTAAATGCTAATTCTGAATCTGATTTCTTTAGGATGAGGGCAAGCTTCGAGATGCCCTTAGTTTTGCTAATGCCTGTGGTGCATTGACCGTGATGGAGAGAGGAGCAATTCCAGCTTTGCCTACAAAAGAAGTAGTGTTGAACGCCTTGCTCAAGTCAGTTGCATAATATCCATCCGACCTATTAATCGGTTGCCATTTAAATGCACTTGCAAAAAGATCTCCATGTGCTCCTTGCATAGTTCTTGTAGGGTAAAAGAATATTGTATAACCACATTAGCCAATAATCGAGAATAATTTCTGATAAATATGTGGTAGTTCATAACCCACATTATTAAGCACATGTATTTATTCAAGATCAATGTTCAATTCTTTTGGGTAATGCATTGGTTTGATTCAGTCATTC</genome_strand>
        <mrna_strand>AGCACTAATAAGCAAGTGGGTAAATCATGATTTTTGTCTGACAAGTGACAGGGATAACTAGAGGTCGTCGTCGGCTAGTCTTTGGGCCATCCAACAAAACAAAACTTGTATGTTAGCCAATTTCGATTCATTGATTTCTCCGCTGCTACTATTTTCCCCAACAGAAAGAATTGCTTCAAAATTAGGGTTTATTGCCTGAAAATTACTAGTTTTACAACGATTGCTCCAATACCTTCTCCTAATTTCCATTTTAGTTGCTGAAATTTTGACGCCTGATGTAACTGTATTTTAGGTTTTAATTGTGAAATACGAGTTTCTCAGATCAGATCAGTTCCTCTGGTTTTTTTACTTTCTAATAAATGGCTCTTCATGCTACTGCTTTCTCCTTCACTGGAGTTTCTACTTCAAGTAAATCTTCCAGAAGCGCTTTGCTTTCAGTCTTTCCTCTTCCTAGAAGATGCACTGTCAAAGCAACTTCCCAGTATCCGCACAGCTTTCCTCGATGTAAAATCCAAG...........................................................................................................................GAAGAGCATTGCCAAGTGACAATGGGCTAGTGGAGAAGGATGAATCTTCTCTTGTTGTGTGCTTTGGAGAAATGCTCATTGATTTTGTTCCGACTACAAGTGGGCTTTCATTGGCTGAAGCTCCTGCATTTAAAAAGGCTCCTGGTGGTGCACCAGCTAATGTTGCTGTTGGTATTTCCCGTCTTGGTGGTTCATCAGCTTTCATTGGCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTGAAGACGAATTTGGTTACATGCTTGCTGAGATTTTGAAGGAGAACAATGTCAACAGTGATGGTATGCGATTTGATCCAGGTGCTCGCACTGCTTTAGCATTTGTAACACTGAGAAAGGATGGAGAACGTGAATTTATGTTCTATCGTAACCCAAGTGCTGATATGTTGCTTCAAGAGGATGAACTTGATTTAGAGTTGATCAGGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAAGTTTTTCATTATGGTTCCATAAGTCTGATTACGGAGCCATGCAAATCAGCCCATATTGCAGCTGCAAAAGCTGCAAAGGATGCTGGTGTGATCTTATCCTATGATCCCAATTTGAGGCTTCCATTGTGGCCATCTGCAGAAAGTGCTAGAGAAGGAATCCTTAGCATATGGAATACTGCTGATATAATTAAG..............................................................................................................................................ATAAGTGAAGAAGAGATTTCGTTTTTGACACAAGGAGAAGATCCTTATGATGATAATGTTGTCCGTAAGTTGTACCATCCAAACCTCAAGTTACTCCTCGTCACAGAAGGTCCAGAAGGTTGCCGATATTACACCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTCAGTGGACGAGTTAAGGGTATAAAGGTGGACGCTGTGGACACCACAGGTGCTGGAGATGCTTTTGTAGCCGGAATATTGTCACAGCTAGCATCTGATGTCTCTCTGCTTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAGGGCAAGCTTCGAGATGCCCTTAGTTTTGCTAATGCCTGTGGTGCATTGACCGTGATGGAGAGAGGAGCAATTCCAGCTTTGCCTACAAAAGAAGTAGTGTTGAACGCCTTGCTCAAGTCAGTTGCATAATATCCATCCGACCTATTAATCGGTTGCCATTTAAATGCACTTGCAAAAAGATCTCCATGTGCTCCTTGCATAGTTCTTGTAGGGTAAAAGAATATTGTATAACCACATTAGCCAATAATCGAGAATAATTTCTGATAAATATGTGGTAGTTCATAACCCACATTATTAAGCACATGTATTTATTCAAGATCAATGTTCAATTCTTTTGGGTAATGCATTGGTTTGATTCAGTCATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U596820" ref_strand="+" ref_description="SGN-U596820 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|38604456|gb|AAR24912.1| (e_value=2e-27) fructokinase 3 [Lycopersicon esculentum]; (*ATH) AT1G66430.1 (e_value=3e-11) | Symbol: None | pfkB-type carbohydrate kinase family protein, contains Pfam profile: PF00294 pfkB family carbohydrate kinase | chr1:24781959-24784278 FORWARD | Aliases: F28G11.11, F28G11_11; ">
      <seq>gcctgatgtaactgtattttaggttttaattgtgaaatacgagtttctcagatcagatcagttcctctggtttttttactttctaataaatggctcttcatgctactgctttctccttcactggagtttctacttcaagtaaatcttccagaagcgctttgctttcagtctttcctcttcctaaaagatgcactgtcaaaacaacttcccagtatccgcacagctttcctccatgtaaaatcccaagaagaacattgcccaatgacaatgggctaatggaaaaagaagaatcctctcctggtgtgtgctttggagaaaagctcattgattttgttcccactacaaatgggctttcattggctgaaactcctgcatttaaaaaaggtcctggtggtgcaccaactaatggtgctggtgggatttccccgcctggtgggtcatcaactttcacttggcaaaggtggtgaagacaaatttggttacatgcttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0073P13.2" temp_strand="-" temp_description="C02HBa0073P13.2  AC215377.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0073P13 sequenced_by:kribb upload_account_name:korea">
        <position start="9261" stop="7221"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8961" g_stop="8716" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="246" r_length="246" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8715" i_stop="8593" i_length="123">
            <donor d_prob="0.987" d_score="0.92"/>
            <acceptor a_prob="0.997" a_score="0.84"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8592" g_stop="8381" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="459" r_length="213" r_score="0.868"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="8380" i_stop="7553" i_length="828">
            <donor d_prob="1.000" d_score="0.80"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="7552" g_stop="7521" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="460" r_stop="491" r_length="32" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0073P13.2" gen_strand="-" ref_id="SGN-U596820" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>490</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0073P13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U596820" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8961" e_stop="8716"/>
          <exon e_start="8592" e_stop="8381"/>
          <exon e_start="7552" e_stop="7521"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTGATGTAACTGTATTTTAGGTTTTAATTGTGAAATACGAGTTTCTCAGATCAGATCAGTTCCTCTGGTTTTTTTACTTTCTAATAAATGGCTCTTCATGCTACTGCTTTCTCCTTCACTGGAGTTTCTACTTCAAGTAAATCTTCCAGAAGCGCTTTGCTTTCAGTCTTTCCTCTTCCTAGAAGATGCACTGTCAAAGCAACTTCCCAGTATCCGCACAGCTTTCCTCGATGTAAAATCCAAGGTGTTCATCTTTTTAAATTTAGTCTACTTTCAGAAGACTGGATTTATCATTTATATGTGTTTGTTGAAAATTAGTTAATTTTGTATTTTGTACTTTCTTCTTCAACTATATTTTTACTTTAAGGAAGAGCATTGCCAAGTGACAATGGGCTAGTGGAGAAGGATGAATCTTCTCTTGTTGTGTGCTTTGGAGAAATGCTCATTGATTTTGTTCCGACTACAAGTGGGCTTTCATTGGCTGAAGCTCCTGCATTTAAAAAGGCTCCTGGTGGTGCACCAGCTAATGTTGCTGTTGGTATTTCCCGTCTTGGTGGTTCATCAGCTTTCA-TTGGCAAGGTATAATTTTGCAAAACTACTTTTTTTTTACCTTCTATATGAATTCGATGTGCTAAACGTAGGTTTGAATGAATCTATAACAGTAGATAAGTTCATTGAAGTTCAACAAGTGTTTAGACAGTTAGTTTTTCGGTCAAGTACATGTATGATCTTGAAGTTAGGCTACTTATCTTGACTATTAGGACCAATTCCAGGCTGTAGGAGGAGGAAACTCTTTGTTGTTGTTTAGTTTCCTCTATTCAAAACATATGACAGTGTCTGGTTACGGAAATAACATTAGAAGCTGCAAGACAATTCACTTAGTTGGAACAATCAATCTTTAATGCATGGTTGAAATTTTGTTATATCTGAATAGAAATCTGAAACTTGCTGTGGAAACATCAGTTGCTCCAACGTATCCCGTGTACCATGGTGATCCGACATCTAATGTTATGTGCTTGTCAAATACCTATTTCTTTGGCATACTAATTACAATAATGATATCATATATCTTAGTCTATATCATTAATGAAGAACAGCTTTGCTCTCATCCTTGACTCACTACTCTGAACTACTGCACTCAAATCAGGAAACTCATCTTAATATGCAGCAGGGTCATCTTTGTTCTGCTCAGGAGGTTTTTGATAATTTGATTGGCTGTTGAAGAATCATATTCCACAAAATTTGATTGACTTGAGATTATGTGAATGAAAATAATCTATCAAAAAGAGTACGTGAAGATGGGTCGTCAAAACGAATATGTGAAGATGTTATAAATTACAAAAGCATAGGCCTTTTCAAATATTTAAGCATTTTATGATATGTACTTATAATTTGTAATCCAATCAGGTTGGTGAAGACGAATTTGGTTACATGCTTGC</genome_strand>
        <mrna_strand>GCCTGATGTAACTGTATTTTAGGTTTTAATTGTGAAATACGAGTTTCTCAGATCAGATCAGTTCCTCTGGTTTTTTTACTTTCTAATAAATGGCTCTTCATGCTACTGCTTTCTCCTTCACTGGAGTTTCTACTTCAAGTAAATCTTCCAGAAGCGCTTTGCTTTCAGTCTTTCCTCTTCCTAAAAGATGCACTGTCAAAACAACTTCCCAGTATCCGCACAGCTTTCCTCCATGTAAAATCCCAA...........................................................................................................................GAAGAACATTGCCCAATGACAATGGGCTAATGGAAAAAGAAGAATCCTCTCCTGGTGTGTGCTTTGGAGAAAAGCTCATTGATTTTGTTCCCACTACAAATGGGCTTTCATTGGCTGAAACTCCTGCATTTAAAAAAGGTCCTGGTGGTGCACCAACTAATGGTGCTGGTGGGATTTCCCCGCCTGGTGGGTCATCAACTTTCACTTGGCAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGAAGACAAATTTGGTTACATGCTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U566691" ref_strand="+" ref_description="SGN-U566691 Tomato 200607#2 [24 ESTs aligned] (*GB) gi|147800616|emb|CAN68471.1| (e_value=1e-49) hypothetical; (*ATH) AT5G37770.1 (e_value=1e-43)  Symbol: None | touch-responsive protein / calmodulin-related protein 2, touch-induced (TCH2), identical to calmodulin-related protein 2,touch-induced SP:P25070 from (Arabidopsis thaliana) | chr5:15016084-15016849 REVERSE | Aliases: K22F20.10, K22F20... ; (*SWP) sp|P25070|CML24_ARATH (e_value=1e-42) Calcium-binding protein CML24 OS=Arabidopsis thaliana GN=CML24; ">
      <seq>ggaacaaaaaaaaaagaaaactcttccccttccccttccgcatcttttcccttccatactgtctccgcaaatggccaaaactcccagcgactccaaacagccggcagtttcatcggcggagatggacggagtcgagaaggtattcaggaagtttgacgccaatggcgacggaaaaatctctctatcggagcttggcgcgattctgaatgcacttggcagtaagacgtcgccggatgaggtaaatagaataatgttggaagttgatactgatggggatggttttattgacttgaaagagtttgctgctttttactgtccgcgaggagcggacggtgataataaggagcttcgggaggctttcgacttgtatgataaggacaaaaacggcaaaatcacagcggctgaattgcattctgttatgaagagcctcggagagaagtgctcgctcaaggattgccgtcgtatgatcagcaaggtggatgttgacggcgatggatgcgttaactttgaggagtttaagaagatgatgagtaggacgtgacttttcggatcataacttatggaatcaacggtaggtttatttgcaaccgatttcggaactctgtagatacgcttctgtttctgccatcgtttttgctgtcaatccactctaactgtagttaggtatgaagaaattccgaatcagcaaaaaactttattattatcctatttgatttgggattatgataattcaaaaaaggtaagaataatactttgcaaaaataaaaattagtcttaagacatctactattgagtcacgcgcaatccatctctgttactgctcattttatctactacttttatttgcttttttggtacttttgagtgcttttgaagaaatgcattttcaaaggtgctgatagtgccaagaccacacggaattgtaatcgtgttaattgggcaacgcgcttgtagctttcatattgctagtggtaaatatgtactccgcctatgtcagtttttattttttcctccgaaacgccgtttttcatttattaaaggcgttttgcatttaatactacttccacctgtttttccacttttccgtcaatatcttaatccatttccacgaaaatactaagatagtacttaattattaggttgtggagtctgattaatatatatagttatttaagaagtttaacaggtgaaattgccaggggttatggagtgtgggagcccccatccgaaggagggtttggggcgctgccccgacctaaattttaggctgtagtattttttctctgtaaccaaaagtattttgatttatcaatatatatgtaatcaaaagtattctgatttatcaatatatatatttcatcgccggggaagtttactcacaaattgttacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0073P13.2" temp_strand="+" temp_description="C02HBa0073P13.2  AC215377.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0073P13 sequenced_by:kribb upload_account_name:korea">
        <position start="17712" stop="19701"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18011" g_stop="19401" g_length="1391"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1391" r_length="1391" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0073P13.2" gen_strand="+" ref_id="SGN-U566691" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1391</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0073P13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U566691" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18011" e_stop="19401"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAACAAAAAAAAAAGAAAACTCTTCCCCTTCCCCTTCCGCATCTTTTCCCTTCCATACTGTCTCCGCAAATGGCCAAAACTCCCAGCGACTCCAAACAGCCGGCAGTTTCATCGGCGGAGATGGACGGAGTCGAGAAGGTATTCAGGAAGTTTGACGCCAATGGCGACGGAAAAATCTCTCTATCGGAGCTTGGCGCGATTCTGAATGCACTTGGCAGTAAGACGTCGCCGGATGAGGTAAATAGAATAATGTTGGAAGTTGATACTGATGGGGATGGTTTTATTGACTTGAAAGAGTTTGCTGCTTTTTACTGTCCGCGAGGAGCGGACGGTGATAATAAGGAGCTTCGGGAGGCTTTCGACTTGTATGATAAGGACAAAAACGGCAAAATCACAGCGGCTGAATTGCATTCTGTTATGAAGAGCCTCGGAGAGAAGTGCTCGCTCAAGGATTGCCGTCGTATGATCAGCAAGGTGGATGTTGACGGCGATGGATGCGTTAACTTTGAGGAGTTTAAGAAGATGATGAGTAGGACGTGACTTTTCGGATCATAACTTATGGAATCAACGGTAGGTTTATTTGCAACCGATTTCGGAACTCTGTAGATACGCTTCTGTTTCTGCCATCGTTTTTGCTGTCAATCCACTCTAACTGTAGTTAGGTATGAAGAAATTCCGAATCAGCAAAAAACTTTATTATTATCCTATTTGATTTGGGATTATGATAATTCAAAAAAGGTAAGAATAATACTTTGCAAAAATAAAAATTAGTCTTAAGACATCTACTATTGAGTCACGCGCAATCCATCTCTGTTACTGCTCATTTTATCTACTACTTTTATTTGCTTTTTTGGTACTTTTGAGTGCTTTTGAAGAAATGCATTTTCAAAGGTGCTGATAGTGCCAAGACCACACGGAATTGTAATCGTGTTAATTGGGCAACGCGCTTGTAGCTTTCATATTGCTAGTGGTAAATATGTACTCCGCCTATGTCAGTTTTTATTTTTTCCTCCGAAACGCCGTTTTTCATTTATTAAAGGCGTTTTGCATTTAATACTACTTCCACCTGTTTTTCCACTTTTCCGTCAATATCTTAATCCATTTCCACGAAAATACTAAGATAGTACTTAATTATTAGGTTGTGGAGTCTGATTAATATATATAGTTATTTAAGAAGTTTAACAGGTGAAATTGCCAGGGGTTATGGAGTGTGGGAGCCCCCATCCGAAGGAGGGTTTGGGGCGCTGCCCCGACCTAAATTTTAGGCTGTAGTATTTTTTCTCTGTAACCAAAAGTATTCTGATTTATCAATATATATGTAATCAAAAGTATTCTGATTTATCAATATATATATTTCATCGCCGTGGAAGTTTACTCACAAATTGTTACC</genome_strand>
        <mrna_strand>GGAACAAAAAAAAAAGAAAACTCTTCCCCTTCCCCTTCCGCATCTTTTCCCTTCCATACTGTCTCCGCAAATGGCCAAAACTCCCAGCGACTCCAAACAGCCGGCAGTTTCATCGGCGGAGATGGACGGAGTCGAGAAGGTATTCAGGAAGTTTGACGCCAATGGCGACGGAAAAATCTCTCTATCGGAGCTTGGCGCGATTCTGAATGCACTTGGCAGTAAGACGTCGCCGGATGAGGTAAATAGAATAATGTTGGAAGTTGATACTGATGGGGATGGTTTTATTGACTTGAAAGAGTTTGCTGCTTTTTACTGTCCGCGAGGAGCGGACGGTGATAATAAGGAGCTTCGGGAGGCTTTCGACTTGTATGATAAGGACAAAAACGGCAAAATCACAGCGGCTGAATTGCATTCTGTTATGAAGAGCCTCGGAGAGAAGTGCTCGCTCAAGGATTGCCGTCGTATGATCAGCAAGGTGGATGTTGACGGCGATGGATGCGTTAACTTTGAGGAGTTTAAGAAGATGATGAGTAGGACGTGACTTTTCGGATCATAACTTATGGAATCAACGGTAGGTTTATTTGCAACCGATTTCGGAACTCTGTAGATACGCTTCTGTTTCTGCCATCGTTTTTGCTGTCAATCCACTCTAACTGTAGTTAGGTATGAAGAAATTCCGAATCAGCAAAAAACTTTATTATTATCCTATTTGATTTGGGATTATGATAATTCAAAAAAGGTAAGAATAATACTTTGCAAAAATAAAAATTAGTCTTAAGACATCTACTATTGAGTCACGCGCAATCCATCTCTGTTACTGCTCATTTTATCTACTACTTTTATTTGCTTTTTTGGTACTTTTGAGTGCTTTTGAAGAAATGCATTTTCAAAGGTGCTGATAGTGCCAAGACCACACGGAATTGTAATCGTGTTAATTGGGCAACGCGCTTGTAGCTTTCATATTGCTAGTGGTAAATATGTACTCCGCCTATGTCAGTTTTTATTTTTTCCTCCGAAACGCCGTTTTTCATTTATTAAAGGCGTTTTGCATTTAATACTACTTCCACCTGTTTTTCCACTTTTCCGTCAATATCTTAATCCATTTCCACGAAAATACTAAGATAGTACTTAATTATTAGGTTGTGGAGTCTGATTAATATATATAGTTATTTAAGAAGTTTAACAGGTGAAATTGCCAGGGGTTATGGAGTGTGGGAGCCCCCATCCGAAGGAGGGTTTGGGGCGCTGCCCCGACCTAAATTTTAGGCTGTAGTATTTTTTCTCTGTAACCAAAAGTATTTTGATTTATCAATATATATGTAATCAAAAGTATTCTGATTTATCAATATATATATTTCATCGCCGGGGAAGTTTACTCACAAATTGTTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U573852" ref_strand="+" ref_description="SGN-U573852 Tomato 200607#2 [49 ESTs aligned] (*GB) gi|189345250|gb|ACD92981.1| (e_value=0) VTC2-like; (*ATH) AT4G26850.1 (e_value=3e-144) | Symbol: None | expressed protein | chr4:13499016-13501654 REVERSE | Aliases: F10M23.190, F10M23_190; (*SWP) sp|Q6ZNW5|U580_HUMAN (e_value=9e-39) UPF0580 protein OS=Homo sapiens; ">
      <seq>aatacgtgtgcaagagagagaccaccggagcaccaaacgccacccaacaaccacccattcaattcttctagaaaagaacatcttcctcaaaattatcgatgaaggatcgctcctcagtaattgttcgttgatcctacaaattcaatcacggctcttcttgaatctttcgtttgtattctcacaattcatcatcaccgcaaagtgttgacccttaatccaactcttctggtggacgataagcaccggaccccttcccctcacggaggtaggggtgcctcacccgctgaaggcggttgcccctccgatctcctcttcctcgccggcggcggtccaattcttcctttctctttttccttctcctaatttttcgtataagagttgtatttttgattatccatccaagaacaggaccgatgttgactgtaaagagggtgcctacactggtttccaactatcaagaggatgttctcgaaggtaacgtcatgggttgtggccgcaagtgcctcggaaaatgctgcatgcctgtttcagtacttcctctatatgcattcaagaatgatgataatgagccaattgaaaatgatgttcaaaccttgcctgaggaggagtgtcagatgtcattcttgaacgatttgttgttgggcttatgggaggagcggatgagccagggactatttcgatatgatgtgacaacctgtgagacgaaggtcattcctgggagatgtggttttattgcgcaactgaatgaggggcgccacctaaagaagcgcccaacagagttttgcattgataaggttcttcagccttttgacgagaacaaattcaactttaccaaagtgggccaggaagaagtgcttttcaggtttgaaccaagtaccgactacaaggcccattacttttccggcatgcgagtaaacagtggtatttcacctagtattgttgctatcaatgtgagcccaattgagtatgggcacgttcttttgatacctcgagttcttgattgcttacctcagagaattgatcgtgatagttttgcaattgctctccattttgccagagaagtggcagatcctttctttagggtaggttataacagtttgggcgcttttgctaccattaaccacctccacttccaggcgtattacttgtcagtgccatttccagttgagaaagcaccaatacagaaaatactggcaaggaaggggctgggtggtgctggagtgattgtatctaagttattaaattaccccgtacgaggttttgcttttgagggaggaaatggaagtactgcccgtgatttgtctgatgctgttgtgaattcctgcatttcccttcagaataaaaacatccctttcaacattctcattgctcagtgtggaaagaagatttttctgcttccccagtgttatgcagagaagcaagcactaggagttgtagaccaagagctcctggacactcaggtgaaccctgctgtatgggaaattagtggacatatagtgcttaagcgaacaaaggattacaatgatgcatcagaggaatatgcatggaaacttctttctgaggtttccatatcagaggagagatttgaagaagtaaagggctatatttctgaagcagctgatctacaagcagatgaggatgaaaacatcaatccagagaaggaaattccagattctcctggtccgcaggtggcctcacatattcctccagattgtttggtgttgcagtgaagaatttgtggcttgctcttgcaagatctaataaaagtttgaagtattatctagtgtatggttgaaattttgtgtgtttgtttttccagcatcttgtttgatgcatactgttgtcttggttggaggttgtaatccccaaatagtgttaaacgtcatggctgcaagctgtggtctttggcaggattgtttacagtaccttttttgttggtgttttgactgtgctagcaaatgttcctaataataacaccagtgtaggactagcaagttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0073P13.2" temp_strand="-" temp_description="C02HBa0073P13.2  AC215377.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0073P13 sequenced_by:kribb upload_account_name:korea">
        <position start="26673" stop="21086"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26373" g_stop="25849" g_length="525"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="525" r_length="525" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25848" i_stop="25125" i_length="724">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25124" g_stop="24700" g_length="425"/>
          <reference_exon_boundary r_type="cDNA" r_start="526" r_stop="950" r_length="425" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24699" i_stop="24624" i_length="76">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24623" g_stop="24438" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="951" r_stop="1136" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24437" i_stop="24351" i_length="87">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24350" g_stop="24084" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="1137" r_stop="1403" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="24083" i_stop="21983" i_length="2101">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="21982" g_stop="21386" g_length="597"/>
          <reference_exon_boundary r_type="cDNA" r_start="1404" r_stop="2000" r_length="597" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0073P13.2" gen_strand="-" ref_id="SGN-U573852" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2000</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0073P13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U573852" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26373" e_stop="25849"/>
          <exon e_start="25124" e_stop="24700"/>
          <exon e_start="24623" e_stop="24438"/>
          <exon e_start="24350" e_stop="24084"/>
          <exon e_start="21982" e_stop="21386"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATACGTGTGCAAGAGAGAGACCACCGGAGCACCAAACGCCACCCAACAACCACCCATTCAATTCTTCTAGAAAAGAACATCTTCCTCAAAATTATCGATGAAGGATCGCTCCTCAGTAATTGTTCGTTGATCCTACAAATTCAATCACGGCTCTTCTTGAATCTTTCGTTTGTATTCTCACAATTCATCATCACCGCAAAGTGTTGACCCTTAATCCAACTCTTCTGGTGGACGATAAGCACCGGACCCCTTCCCCTCACGGAGGTAGGGGTGCCTCACCCGCTGAAGGCGGTTGCCCCTCCGATCTCCTCTTCCTCGCCGGCGGCGGTCCAATTCTTCCTTTCTCTTTTTCCTTCTCCTAATTTTTCGTATAAGAGTTGTATTTTTGATTATCCATCCAAGAACAGGACCGATGTTGACTGTAAAGAGGGTGCCTACACTGGTTTCCAACTATCAAGAGGATGTTCTCGAAGGTAACGTCATGGGTTGTGGCCGCAAGTGCCTCGGAAAATGCTGCATGCCTGGTTTGTGTTCGATTCTTTAAATCTTTATCTTTCGGAATGTATAATTTTCTGAATGCTTTTTGCCCCTGTTTCTATATGTCTGGTGATTGATTATTAGGAGTAACAATTGTTCACAGATTATTTTAGAGTTGAGCAAACAATGCAAGGAAAGAATTACAGTTGTAATTATTATGTAGATTCAGCTTTTGCCAGTGCTATTGCCTCTTAAAGATCATGGGTTCCATTTTAAGATTTTTAGGGTTAATCTTTGGTATTTTAATGTGTATGGGTTCATATCTGCTATTTTAGTAAATTTCTGACAATAAATTATGTTCCACATCGAAAGTTATGGGTTCAATTGAACCCGTATGTGCAATGCTAGATACACCTATAATAGCATGAACATCTATATAACTATAGATGAATTTACACTCACTGAAAATGGTAAACCTGTAGTTTACTATTTGTAGTGTTAATGTTGCTTAGAGTTGATATAATCTAGTGGAGTATCTTAGGTTCGTTGATAATATGCGGCAAAATATCCACTTTGCATGCACCTTAATGCAGAAATAAGCAAACTGCATGTATTTTCCGGTGAAGCCAAAAGTGGGTCGCGTGCCTTTAATGATTTTGTTTATTATAGATCTATGTGGCTTCTGTTTCGTAGTGGATACATCTTGGTAAGTCAGATGTGTTAAGAATGAGGTTTGGGTTGTAGATTCATTATTTTGTTGCTTGATTTCAGTTTCAGTACTTCCTCTATATGCATTCAAGAATGATGATAATGAGCCAATTGAAAATGATGTTCAAACCTTGCCTGAGGAGGAGTGTCAGATGTCATTCTTGAACGATTTGTTGTTGGGCTTATGGGAGGAGCGGATGAGCCAGGGACTATTTCGATATGATGTGACAACCTGTGAGACGAAGGTCATTCCTGGGAGATGTGGTTTTATTGCGCAACTGAATGAGGGGCGCCACCTAAAGAAGCGCCCAACAGAGTTTTGCATTGATAAGGTTCTTCAGCCTTTTGACGAGAACAAATTCAACTTTACCAAAGTGGGCCAGGAAGAAGTGCTTTTCAGGTTTGAACCAAGTACCGACTACAAGGCCCATTACTTTTCCGGCATGCGAGTAAACAGTGGTATTTCACCTAGTATTGTTGCTATCAATGTAAGGAAATTGTACTCTGGTGCTCTTCTTATAGTTATTATCAGATGCATCATGGCTTATGGATCTTGTTTTTTAGGTGAGCCCAATTGAGTATGGGCACGTTCTTTTGATACCTCGAGTTCTTGATTGCTTACCTCAGAGAATTGATCGTGATAGTTTTGCAATTGCTCTCCATTTTGCCAGAGAAGTGGCAGATCCTTTCTTTAGGGTAGGTTATAACAGTTTGGGCGCTTTTGCTACCATTAACCACCTCCACTTCCAGGTAATGGATCAAGCGAATAATTTCTGATTATTTGATTAGCATGACTTAACTATATATATGATGTTCTCTTGTTGACATTCACGACAGGCGTATTACTTGTCAGTGCCATTTCCAGTTGAGAAAGCACCAATACAGAAAATACTGGCAAGGAAGGGGCTGGGTGGTGCTGGAGTGATTGTATCTAAGTTATTAAATTACCCCGTACGAGGTTTTGCTTTTGAGGGAGGAAATGGAAGTACTGCCCGTGATTTGTCTGATGCTGTTGTGAATTCCTGCATTTCCCTTCAGAATAAAAACATCCCTTTCAACATTCTCATTGCTCAGTGTGGAAAGAAGATTTTTCTGCTTCCCCAGGTAAATAGCTTGTCCAACTTTGTGTACTGTTGCTACAACACTAGCAAAAGTTTCTCTTAGGTTTATCAGTACAGTCATGGAATTTGTCATATCCTGCTGTTTAGAAGCTTTAACGAATACTTGTTAGATTTTTCGAGAAATGCATAAATATATTTTAAGACACAACTGGAGAATCTCTAGTTAATCAGCTAGTACCTGCTGATTGCAAAGCTGTGCACATTTGTAAGAAGTGAATTTTACTTGATGGATTTCTATGGGCCAGGGATTGGAAATAGGATATTGTTGGGAAAAAGTTGGAGATGAAATTATAATGAATGCTGGAAGGGGTTATACTCTGGAGATTGTTAATGATACTTGACAGGTTTGTCGTAGGATTGATGTAACTTTATTGCCCGTTGGTTCCTCAATTGGTTGGGCATTTTTAGTTGGTGGGGATAGTGATGGAAAACGGGCAGATTGGATTTGGACGTGAGCAGATTGAAAGATTGATTAGGTAAAATATTCTTAGCCCACTTTAATCTCCTAAAGCTAGAAAACTTTAAAAACCTTTTATGACTACATTTTTTATCCAAATGGTTGTAAATGAAGTTATATATACCCTAGAGACATTGAGTAGTGAATTACTAATAATGTTATTAGTATATAAATACAATTATCTTTTCTACCAAAAAATTGTAGATTGAATTATTTGTCAAAACAACAGGAGAAGACTACAAATTAATCCAAAGGCAAAAGGAGAAAAGGAAAACAAGTCATACAGGATGTCCACACGTGATGCAATATCAATATGTGGAAGAAACCCTAAATGTAAGAACAAGAAATGAAGATAGAAGAAAGGTAGAAGTGAGGAATTAATTAAAAGTTAAAGCTATAGAAAGCTAAAACCTTCCATTAATAAACAAAACAAGCACCAAATCTATGAAGATACATCGAAGGAACGATTCTTCAAACACGAAATCTATCTTTAAGATGACCGTCAAGAGGAAAGATTCCACAAGCAAGAAACCTCATCAACATTATTTAGCTACAAAGGTCATAGACTACTCTGATTAGAGTTTCACTCGTCAAACCAATATCCAAAATGATCCAAGTCTAAATGGGTTGTTCTCAACTTTTTATAGTCTAAGATAGATATTACGAAAATACCCTTAATGAAGAGAATAGCTTCTTTGAATAACATAGCTTGTTGTGGATGCGAGAAAGTCAATTAATTTAGTATTTGACGAATTTTTCTTTTGTAGATTTATTTATTATTTATTTATAATATAAGTGACTTTATTTATTATTCTAGAATAGGGTTTATGTTTCATAGCTTCATAAGGATTAGGTTAATCCATAGTTATTAGTTTGAAATAGGATTTATATTTCCTTCTTTCATAAGAATTAAAGTGTGTTGTAATAAGACTCTTATTTAAAGGAGTTTATGAGGAATAAATCAATAAGTCATATATCAGAGTTCTCTCTTTCATTAGACTCTAAGGTTTGAGTCTCCTTTTGTTGAAGAGATCGGAGTGATCTTTTTTTATTGTACTCTAATGTTTCAGCCTCTCTTTTAACTAGCTAAGTTTAAATATTGCCATGTGAATCAATTCTTCCGTATATGTATTCAATTGTTAGGAAACAAAATAAATGATTTTAAATCGGGAAAAGGAGGAACATGAAAAATAACAACATATTAAAAGGGGAAACATCGCAGTAAAAAGCAGAGAATAAATAGATAACACATCTGAGCAGCAGCTGTTGGTGTTGCCAATGCAGCAGCTACAGTTGAAAGAGATTTAAGAGGGAGGGGAAACAGATAAAGTCTGGGAACAACAACATACCAGTGTAGTTCCGCAAGTGAGGTCTAGGGAGGGCGGTGTATACTAATTAGTTCACGTTTTGATCTTTAAGCATCAGTTGTCAATTTTGTAGTGGGGGGAGGTCGAAACATTCAACTTTACACTTGTTTCAACTGAGTTTCTGTTATAGTAGAATAGCATGGGGTGCTCACCAGCACATGATTTTCATCTTGAATATAGAATATTTTGTGACTTGCGCATACAATTCTTTATGATGGTGAAGAAGCTTACATCATCCTTTTTCTGGGATGATTGTTTAGTGTTATGCAGAGAAGCAAGCACTAGGAGTTGTAGACCAAGAGCTCCTGGACACTCAGGTGAACCCTGCTGTATGGGAAATTAGTGGACATATAGTGCTTAAGCGAACAAAGGATTACAATGATGCATCAGAGGAATATGCATGGAAACTTCTTTCTGAGGTTTCCATATCAGAGGAGAGATTTGAAGAAGTAAAGGGCTATATTTCTGAAGCAGCTGATCTACAAGCAGATGAGGATGAAAACATCAATCCAGAGAAGGAAATTCCAGATTCTCCTGGTCCGCAGGTGGCCTCACATATTCCTCCAGATTGTTTGGTGTTGCAGTGAAGAATTTGTGGCTTGCTCTTGCAAGATCTAATAAAAGTTTGAAGTATTATCTAGTGTATGGTTGAAATTTTGTGTGTTTGTTTTTCCAGCATCTTGTTTGATGCATACTGTTGTCTTGGTTGGAGGTTGTAATCCCCAAATAGTGTTAAACGTCATGGCTGCAAGCTGTGGTCTTTGGCAGGATTGTTTACAGTACCTTTTTTGTTGGTGTTTTGACTGTGCTAGCAAATGTTCCTAATAATAACACCAGTGTAGGACTAGCAAGTTTTG</genome_strand>
        <mrna_strand>AATACGTGTGCAAGAGAGAGACCACCGGAGCACCAAACGCCACCCAACAACCACCCATTCAATTCTTCTAGAAAAGAACATCTTCCTCAAAATTATCGATGAAGGATCGCTCCTCAGTAATTGTTCGTTGATCCTACAAATTCAATCACGGCTCTTCTTGAATCTTTCGTTTGTATTCTCACAATTCATCATCACCGCAAAGTGTTGACCCTTAATCCAACTCTTCTGGTGGACGATAAGCACCGGACCCCTTCCCCTCACGGAGGTAGGGGTGCCTCACCCGCTGAAGGCGGTTGCCCCTCCGATCTCCTCTTCCTCGCCGGCGGCGGTCCAATTCTTCCTTTCTCTTTTTCCTTCTCCTAATTTTTCGTATAAGAGTTGTATTTTTGATTATCCATCCAAGAACAGGACCGATGTTGACTGTAAAGAGGGTGCCTACACTGGTTTCCAACTATCAAGAGGATGTTCTCGAAGGTAACGTCATGGGTTGTGGCCGCAAGTGCCTCGGAAAATGCTGCATGCCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGTACTTCCTCTATATGCATTCAAGAATGATGATAATGAGCCAATTGAAAATGATGTTCAAACCTTGCCTGAGGAGGAGTGTCAGATGTCATTCTTGAACGATTTGTTGTTGGGCTTATGGGAGGAGCGGATGAGCCAGGGACTATTTCGATATGATGTGACAACCTGTGAGACGAAGGTCATTCCTGGGAGATGTGGTTTTATTGCGCAACTGAATGAGGGGCGCCACCTAAAGAAGCGCCCAACAGAGTTTTGCATTGATAAGGTTCTTCAGCCTTTTGACGAGAACAAATTCAACTTTACCAAAGTGGGCCAGGAAGAAGTGCTTTTCAGGTTTGAACCAAGTACCGACTACAAGGCCCATTACTTTTCCGGCATGCGAGTAAACAGTGGTATTTCACCTAGTATTGTTGCTATCAAT............................................................................GTGAGCCCAATTGAGTATGGGCACGTTCTTTTGATACCTCGAGTTCTTGATTGCTTACCTCAGAGAATTGATCGTGATAGTTTTGCAATTGCTCTCCATTTTGCCAGAGAAGTGGCAGATCCTTTCTTTAGGGTAGGTTATAACAGTTTGGGCGCTTTTGCTACCATTAACCACCTCCACTTCCAG.......................................................................................GCGTATTACTTGTCAGTGCCATTTCCAGTTGAGAAAGCACCAATACAGAAAATACTGGCAAGGAAGGGGCTGGGTGGTGCTGGAGTGATTGTATCTAAGTTATTAAATTACCCCGTACGAGGTTTTGCTTTTGAGGGAGGAAATGGAAGTACTGCCCGTGATTTGTCTGATGCTGTTGTGAATTCCTGCATTTCCCTTCAGAATAAAAACATCCCTTTCAACATTCTCATTGCTCAGTGTGGAAAGAAGATTTTTCTGCTTCCCCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTATGCAGAGAAGCAAGCACTAGGAGTTGTAGACCAAGAGCTCCTGGACACTCAGGTGAACCCTGCTGTATGGGAAATTAGTGGACATATAGTGCTTAAGCGAACAAAGGATTACAATGATGCATCAGAGGAATATGCATGGAAACTTCTTTCTGAGGTTTCCATATCAGAGGAGAGATTTGAAGAAGTAAAGGGCTATATTTCTGAAGCAGCTGATCTACAAGCAGATGAGGATGAAAACATCAATCCAGAGAAGGAAATTCCAGATTCTCCTGGTCCGCAGGTGGCCTCACATATTCCTCCAGATTGTTTGGTGTTGCAGTGAAGAATTTGTGGCTTGCTCTTGCAAGATCTAATAAAAGTTTGAAGTATTATCTAGTGTATGGTTGAAATTTTGTGTGTTTGTTTTTCCAGCATCTTGTTTGATGCATACTGTTGTCTTGGTTGGAGGTTGTAATCCCCAAATAGTGTTAAACGTCATGGCTGCAAGCTGTGGTCTTTGGCAGGATTGTTTACAGTACCTTTTTTGTTGGTGTTTTGACTGTGCTAGCAAATGTTCCTAATAATAACACCAGTGTAGGACTAGCAAGTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570175" ref_strand="+" ref_description="SGN-U570175 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|147805778|emb|CAN69475.1| (e_value=9e-62) hypothetical; (*ATH) AT1G73580.1 (e_value=7e-60) | Symbol: None | C2 domain-containing protein, similar to zinc finger and C2 domain protein GI:9957238 from (Arabidopsis thaliana) | chr1:27658502-27659179 FORWARD | Aliases: F6D5.3, F6D5_3; (*SWP) sp|O14065|YC31_SCHPO (e_value=5e-11) Uncharacterized protein C962.01 OS=Schizosaccharomyces pombe GN=SPCC962.01; ">
      <seq>tttgttgggtcttatgagagttcgtattcacagaggtattaatttggctattagagatgttactaccagcgatccttacgttgttgttaggatgggcaaacagaaattgaagactcgagtggtgaagaagaatctcaacccagaatggaatgaagaattaacactatctattaccgagccaattctcccaatcaaactgcatgtttatgacaaggatatattttctcttgacgataagatgggtgatgcagaagttgacatacagccatttatagatgcggcgagaaagcggtacaagaacatccctagtggaaccataatcacaaaaataaagccaagcaggcaaaattgtttctctgaagagagctccattgtgtgggaaaatgatcaggttgtacaaaatgtgtttattagattgcgaaatgttgagcgtggtgaaatagaactacaattgcagtggattgacattcctggttccaagggtgtgtagctaactactactatccatcaaatcatgtacagtcactatcctttattcatgttgtattctggtctgttttttgattaaaaatttctgttaccaantg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0073P13.2" temp_strand="-" temp_description="C02HBa0073P13.2  AC215377.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0073P13 sequenced_by:kribb upload_account_name:korea">
        <position start="30262" stop="28193"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29962" g_stop="29860" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="103" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29859" i_stop="29120" i_length="740">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29119" g_stop="29024" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="199" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29023" i_stop="28881" i_length="143">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28880" g_stop="28493" g_length="388"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="587" r_length="388" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0073P13.2" gen_strand="-" ref_id="SGN-U570175" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>587</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0073P13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U570175" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29962" e_stop="29860"/>
          <exon e_start="29119" e_stop="29024"/>
          <exon e_start="28880" e_stop="28493"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTTGGGTCTTATGAGAGTTCGTATTCACAGAGGTATTAATTTGGCTATTAGAGATGTTACTACCAGCGATCCTTACGTTGTTGTTAGGATGGGCAAACAGGTAACGCCAATTTCATTTTTTTCTTCTCTTTTCTGCTGAACGAACAGCTATTACTTTTTTTTTTGTTGTTGTTCTTGATTTTCAGAAAATTGAAATTCTAGTAATAATGGGTTTTATAAATTTTGTAGTTTAGATAAAAACAGTGTTCGTCAATCTGCAGTTTTCTTGTAAAAAAATTTCTGAGTTATTATAAATTTGATAGTTTCCTCAAAAGGAATCGCCACCAATTTAGAGTGTACCAGACCCAGGGGCATCACCGGAATCCACCGAACACAAGACTATATTTTTATTTTGCGGACATCTTTTATGAAGATCTTGGACTTATTATTACAGACTTTAATTATTTTCGATAGATCATTAGTTAAAAATAATAATAATATAGAAACCATACCCTGTTTTTGTGTTAATCTCTGTTTTTTTTTTCTTTTTTTGCAAGGGTGATTATTTGGTCAACTTGCACGCTCCTCTATTGTTCGACCTATTGAATAATTGGGGCAGATGGAATAAATCGAATTTGAATCTTGATCATTTCTTTGTTGCTTGTGTTACCTTGACTAGTTCATATCTTAATTGGGTTCATTAAAAGAGAAGATAAAAAGACGACTACTTTTGAGTAATGAATTGCAGTAATAGATTTAAAACTAGTTTGGGCTTAGTTTTTGCCATGTTGATGACTGGCTTCTAACAAAATAAATACAAATATACTTCCTTGTTATGTTAATTATTAATATTTGGAGCAGAAATTGAAGACTCGAGTGGTGAAGAAGAATCTCAACCCAGAATGGAATGAAGAATTAACACTATCTATTACCGAGCCAATTCTCCCAATCAAACTGGTAATTTCTTTCACTTTATTTCATCAAGGAATTAAACAGCACATAACCTTATTATCCGGCTTGTGTTAGCTTTGGTCCAAATCATGTATTTGTCTTTGGAAACTAATTGAATATGCACAACTCGCATCGATTCCTGATTGCAGCATGTTTATGACAAGGATATATTTTCTCTTGACGATAAGATGGGTGATGCAGAAGTTGACATACAGCCATTTATAGATGCGGCGAGAAAGCGGTACAAGAACATCCCTAGTGGAACCATAATCACAAAAATAAAGCCAAGCAGGCAAAATTGTTTCTCTGAAGAGAGCTCCATTGTGTGGGAAAATGATCAGGTTGTACAAAATGTGTTTATTAGATTGCGAAATGTTGAGCGTGGTGAAATAGAACTACAATTGCAGTGGATTGACATTCCTGGTTCCAAGGGTGTGTAGCTAACTACTACTATCCATCAAATCATGTACAGTCACTATCCTTTATTCATGTTGTATTCTGGTCTGTTTTTTGATTAAAAATTTCTGTTACCAAATG</genome_strand>
        <mrna_strand>TTTGTTGGGTCTTATGAGAGTTCGTATTCACAGAGGTATTAATTTGGCTATTAGAGATGTTACTACCAGCGATCCTTACGTTGTTGTTAGGATGGGCAAACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTGAAGACTCGAGTGGTGAAGAAGAATCTCAACCCAGAATGGAATGAAGAATTAACACTATCTATTACCGAGCCAATTCTCCCAATCAAACTG...............................................................................................................................................CATGTTTATGACAAGGATATATTTTCTCTTGACGATAAGATGGGTGATGCAGAAGTTGACATACAGCCATTTATAGATGCGGCGAGAAAGCGGTACAAGAACATCCCTAGTGGAACCATAATCACAAAAATAAAGCCAAGCAGGCAAAATTGTTTCTCTGAAGAGAGCTCCATTGTGTGGGAAAATGATCAGGTTGTACAAAATGTGTTTATTAGATTGCGAAATGTTGAGCGTGGTGAAATAGAACTACAATTGCAGTGGATTGACATTCCTGGTTCCAAGGGTGTGTAGCTAACTACTACTATCCATCAAATCATGTACAGTCACTATCCTTTATTCATGTTGTATTCTGGTCTGTTTTTTGATTAAAAATTTCTGTTACCAANTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U587536" ref_strand="+" ref_description="SGN-U587536 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|217071206|gb|ACJ83963.1| (e_value=2e-30) unknown; (*ATH) AT3G17980.1 (e_value=9e-29) | Symbol: None | C2 domain-containing protein, similar to zinc finger and C2 domain protein GI:9957238 from (Arabidopsis thaliana) | chr3:6152386-6153440 FORWARD | Aliases: MEB5.20; ">
      <seq>agaatttgttgggtcttatgagagttcgtattcacagaggtattaatttggctattagagatgttactaccagcgatccttacgttgttgttaggatgggcaaacagggtgattatttggtcaacttgcacgctcctctattgttcgacctattgaataattggggcagatggaataaatcgaatttgaatcttgatcatttctttgttgcttgtgttaccttgactagttcatatcttaattgggttcattaaaagagaagataaaaagacgactacttttgagtaatgaattgcagtaatagatttaaaactagtttgggcttagtttttgccatgttgatgactggcttctaacaaaataaatacaaatatacttccttgttatgttaattattaatatttggagcagaaattgaagactcgagtggtgaagaagaatctcaacccagaatggaatgaagaattaacactatctattaccgagccaattctcccaatcaaactgcatgtttatgacaaggatatattttctcttgacgataagatgggtgatgcagaagttgacatacagccatttatagatgcggcgagaaagcggtacaagaacatccctagtggaaccataatcacaaaaataaagccaagcaggcaaaattgtttctctgaagagagctccattgtgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0073P13.2" temp_strand="-" temp_description="C02HBa0073P13.2  AC215377.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0073P13 sequenced_by:kribb upload_account_name:korea">
        <position start="30266" stop="28402"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29966" g_stop="29860" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="107" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29859" i_stop="29424" i_length="436">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29423" g_stop="29024" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="507" r_length="400" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29023" i_stop="28881" i_length="143">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28880" g_stop="28702" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="686" r_length="179" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0073P13.2" gen_strand="-" ref_id="SGN-U587536" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>686</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0073P13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U587536" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29966" e_stop="29860"/>
          <exon e_start="29423" e_stop="29024"/>
          <exon e_start="28880" e_stop="28702"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAATTTGTTGGGTCTTATGAGAGTTCGTATTCACAGAGGTATTAATTTGGCTATTAGAGATGTTACTACCAGCGATCCTTACGTTGTTGTTAGGATGGGCAAACAGGTAACGCCAATTTCATTTTTTTCTTCTCTTTTCTGCTGAACGAACAGCTATTACTTTTTTTTTTGTTGTTGTTCTTGATTTTCAGAAAATTGAAATTCTAGTAATAATGGGTTTTATAAATTTTGTAGTTTAGATAAAAACAGTGTTCGTCAATCTGCAGTTTTCTTGTAAAAAAATTTCTGAGTTATTATAAATTTGATAGTTTCCTCAAAAGGAATCGCCACCAATTTAGAGTGTACCAGACCCAGGGGCATCACCGGAATCCACCGAACACAAGACTATATTTTTATTTTGCGGACATCTTTTATGAAGATCTTGGACTTATTATTACAGACTTTAATTATTTTCGATAGATCATTAGTTAAAAATAATAATAATATAGAAACCATACCCTGTTTTTGTGTTAATCTCTGTTTTTTTTTTCTTTTTTTGCAAGGGTGATTATTTGGTCAACTTGCACGCTCCTCTATTGTTCGACCTATTGAATAATTGGGGCAGATGGAATAAATCGAATTTGAATCTTGATCATTTCTTTGTTGCTTGTGTTACCTTGACTAGTTCATATCTTAATTGGGTTCATTAAAAGAGAAGATAAAAAGACGACTACTTTTGAGTAATGAATTGCAGTAATAGATTTAAAACTAGTTTGGGCTTAGTTTTTGCCATGTTGATGACTGGCTTCTAACAAAATAAATACAAATATACTTCCTTGTTATGTTAATTATTAATATTTGGAGCAGAAATTGAAGACTCGAGTGGTGAAGAAGAATCTCAACCCAGAATGGAATGAAGAATTAACACTATCTATTACCGAGCCAATTCTCCCAATCAAACTGGTAATTTCTTTCACTTTATTTCATCAAGGAATTAAACAGCACATAACCTTATTATCCGGCTTGTGTTAGCTTTGGTCCAAATCATGTATTTGTCTTTGGAAACTAATTGAATATGCACAACTCGCATCGATTCCTGATTGCAGCATGTTTATGACAAGGATATATTTTCTCTTGACGATAAGATGGGTGATGCAGAAGTTGACATACAGCCATTTATAGATGCGGCGAGAAAGCGGTACAAGAACATCCCTAGTGGAACCATAATCACAAAAATAAAGCCAAGCAGGCAAAATTGTTTCTCTGAAGAGAGCTCCATTGTGTG</genome_strand>
        <mrna_strand>AGAATTTGTTGGGTCTTATGAGAGTTCGTATTCACAGAGGTATTAATTTGGCTATTAGAGATGTTACTACCAGCGATCCTTACGTTGTTGTTAGGATGGGCAAACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGATTATTTGGTCAACTTGCACGCTCCTCTATTGTTCGACCTATTGAATAATTGGGGCAGATGGAATAAATCGAATTTGAATCTTGATCATTTCTTTGTTGCTTGTGTTACCTTGACTAGTTCATATCTTAATTGGGTTCATTAAAAGAGAAGATAAAAAGACGACTACTTTTGAGTAATGAATTGCAGTAATAGATTTAAAACTAGTTTGGGCTTAGTTTTTGCCATGTTGATGACTGGCTTCTAACAAAATAAATACAAATATACTTCCTTGTTATGTTAATTATTAATATTTGGAGCAGAAATTGAAGACTCGAGTGGTGAAGAAGAATCTCAACCCAGAATGGAATGAAGAATTAACACTATCTATTACCGAGCCAATTCTCCCAATCAAACTG...............................................................................................................................................CATGTTTATGACAAGGATATATTTTCTCTTGACGATAAGATGGGTGATGCAGAAGTTGACATACAGCCATTTATAGATGCGGCGAGAAAGCGGTACAAGAACATCCCTAGTGGAACCATAATCACAAAAATAAAGCCAAGCAGGCAAAATTGTTTCTCTGAAGAGAGCTCCATTGTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U569351" ref_strand="+" ref_description="SGN-U569351 Tomato 200607#2 [8 ESTs aligned] (*GB) gi|157346901|emb|CAO17140.1| (e_value=1e-81) unnamed; (*ATH) AT5G39790.1 (e_value=2e-68)  Symbol: None | 5'-AMP-activated protein kinase beta-1 subunit-related, contains similarity to Swiss-Prot:P80387 5'-AMP-activated protein kinase, beta-1 subunit (AMPK beta-1 chain) (AMPKb) (40 kDa subunit) (Sus scrofa) | chr5:15949942-15952489 REVERS... ; ">
      <seq>ggttttcctaggtgatttcttcaaccctggaaaatttttattttagggttttctttttcttggtttggggactccaattatactgcaatgtggaatcttgatatgcattctctctcaatcttgaactgtataggttcaactacactgattttgaatgttgaatccatctttttatgtttatgattttttattaccaatttgtgtttccttttattctttaatctccttatgcattattctgatcatacaatcttgatcaagaaaatgctgacatattctgaatttgtctttttaatggcaatgataaggttcaaggtggaaaatatcgatggagttagaggaaatatgacttcatataaatcaagaataggtttctgtaggatgcatacattattttcagtccctaattggaaactcagcatcccatgtacttcttggaaaatattttgtgcccctgaaaattcactggcagtatccgagaaaatagaagacgctggtctgtctgatcctgaacaagttcctgagcaacctttgagaaccgaagacttgaagttattgcttgctgatgctgaaagatcgaagcttctcaagaaattgagtgaagccaaccgatataatcggttgcttaagcgagagttgcaagctaaggaggatgcgatggttaatttcaaaagtgaactttcagtcaccgaacttgagattcaggctttggctagattggctgaagaaattgcaaaatctgctatccctgctggttcaagaaaaattaaaggcagatatatccaatcacacctattttcacgtttggaagccataagtgaaaaattgaaggagcaaataaagggcgtggaagctgtacaagccaaagaggttcctttatcctgggttggggtagcagagagtgtgcaagtaatgggctcctttgatggttggagtcaaggagagcacttatctccagagtacaccggctcttatatgaacttttcagctacattgttcctaagacctggaaggtacgaaattaagttcttggtagatgatgagtggaaactatccccagaattaccaactaccggagaggggttaactaagaacaatttattggtcgtggaatagctcatttagctaggacaggtgctgaaagtttgtactataggtggaaaaacaacttgttaatcgtcgtacagttgatctcaggactcttaagcagcgtagctcatgaggtgggattgctcaagacatctaattcgctcgacctactattaactcaaagtgttgaaggtatatataatagaccagacctcctaaagtggtggtataaagggcgatccaagacttccgtttttctcttataaagtcttgagttgaatgttcagactctttcgaaaatgtttggaagcttttggtaaaaaggtttatttttaaaaaagtgaggtatttatttggctgagcttttattttttaaaataagttgtactatcaccacaaatttaagtgaaatgattctgttcgatttatcagatgaatctgataataaatgtctccaattttgtatgatttacatctaacccacctccattgttaatagttagtagtccgtacattaaactttgatgattcaaaaaaatcagagccgcgactttattatttagtatatacaacaaccctaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0073P13.2" temp_strand="+" temp_description="C02HBa0073P13.2  AC215377.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0073P13 sequenced_by:kribb upload_account_name:korea">
        <position start="36232" stop="40859"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36531" g_stop="37076" g_length="546"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="546" r_length="546" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37077" i_stop="37256" i_length="180">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="37257" g_stop="37346" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="547" r_stop="636" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37347" i_stop="38316" i_length="970">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="38317" g_stop="38385" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="637" r_stop="705" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="38386" i_stop="38678" i_length="293">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="38679" g_stop="38784" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="706" r_stop="811" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="38785" i_stop="38901" i_length="117">
            <donor d_prob="0.827" d_score="1.00"/>
            <acceptor a_prob="0.811" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="38902" g_stop="38990" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="812" r_stop="900" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="38991" i_stop="39565" i_length="575">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.859" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="39566" g_stop="39678" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="901" r_stop="1013" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="39679" i_stop="39776" i_length="98">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="39777" g_stop="39974" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="1014" r_stop="1211" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="39975" i_stop="40100" i_length="126">
            <donor d_prob="0.911" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="40101" g_stop="40559" g_length="459"/>
          <reference_exon_boundary r_type="cDNA" r_start="1212" r_stop="1670" r_length="459" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0073P13.2" gen_strand="+" ref_id="SGN-U569351" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1670</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0073P13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U569351" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36531" e_stop="37076"/>
          <exon e_start="37257" e_stop="37346"/>
          <exon e_start="38317" e_stop="38385"/>
          <exon e_start="38679" e_stop="38784"/>
          <exon e_start="38902" e_stop="38990"/>
          <exon e_start="39566" e_stop="39678"/>
          <exon e_start="39777" e_stop="39974"/>
          <exon e_start="40101" e_stop="40559"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTTTCCTAGGTGATTTCTTCAACCCTGGAAAATTTTTATTTTAGGGTTTTCTTTTTCTTGGTTTGGGGACTCCAATTATACTGCAATGTGGAATCTTGATATGCATTCTCTCTCAATCTTGAACTGTATAGGTTCAACTACACTGATTTTGAATGTTGAATCCATCTTTTTATGTTTATGATTTTTTATTACCAATTTGTGTTTCCTTTTATTCTTTAATCTCCTTATGCATTATTCTGATCATACAATCTTGATCAAGAAAATGCTGACATATTCTGAATTTGTCTTTTTAATGGCAATGATAAGGTTCAAGGTGGAAAATATCGATGGAGTTAGAGGAAATATGACTTCATATAAATCAAGAATAGGTTTCTGTAGGATGCATACATTATTTTCAGTCCCTAATTGGAAACTCAGCATCCCATGTACTTCTTGGAAAATATTTTGTGCCCCTGAAAATTCACTGGTAGTATCCGAGAAAATAGAAGACGCTGGTCTGTCTGATCCTGAACAAGTTCCTGAGCAACCTTTGAGAACCGAAGAGGTAAGGTTTTCTATTACCCTGTTGCAGACCTTTATACTAGAAAACGAAACCTCATACAAAAGCCAAATGATTTTTTTCTTGTTCCTCCGTTTGGGGGAATGCTTCATTTCTTAATCGAGAATAATCTTTATTGTTGCTGCAAGTATATTGAGCTATACTGACTCTCTTCTATCTTTATAGTTGAAGTTATTGCTTGCTGATGCTGAAAGATCGAAGCTTCTCAAGAAATTGAGTGAAGCCAACCGATATAATCGGTTGCTTAAGCGAGAGGTATATATTTTATTGGTCTCCTATTCAATCTCGTAAATTCTTCTTATGAGACTGATTACGTGGATGATTCTCCATTTGAGTGTCTGTAACGCATAAAGTTAGTGCTATGTGAGAGAAAAGTTACCTGCATAGTCAGGAGAGGATAGTGAAGTTCCAATCTTTCCCCTTGTGAGTATTTGGAAAGCCAACCATGAGAGAATATTTTTGCATTCCCTTAGACCTCCAAGTCCATCCCTTCTGGCCCTCACTAATATTTGATAAGTGTGGAAACATAGTCTCTGGTACTCAGGTCCTGTTAATAACTCGCATGGTTAGGCCTTTGGAAGCATATTCACAGCTTATGTCAGACTTTTAAGCTAACATAAAGATTAAGGTGGGGAATCCTAGATATACATGGTTTTGGAGAGATGCTTGGATAGGTCACAGACCTTCGAAGATCAAATACCAGGACCTTTATTTGTTTCACTACTAAGACAGGTAGTCTGGCCTCAGATTGTTGGAATGGGGGATGCTGGTGCATTACTTTTAGAAGGATTTGTTTTGATTGGGAGATACCTAAATGGCTCTCCTATTGGCTGATTTAGATAAGGTGGAGCTTTGTGTGAAGTATCTTGAGTCTATAATCCAGGGAAGTGGGGATCGACGATGATATGACACATCGTATTGGTGCAGCATAGATGAAGTGGAGACTTGCATCCGGAGTCTTGTGTGATAAAAAAGTACCACTGAAACTTAAAGGTGTTGTTTTATAGAGTGGTGGTTAGAACGACTTCCTTGAATTCCGGTGATCAGTTTTATATAGTAAGATCTGTTTCTGAGATTTCTGGATGCGATAGGTGAACTAAACTCATAGATAGTTGGGTTAAGTTAAAGGTTTATGACTACAGAAAAATAATGGAAAATGTGCTATATGGAAACTCTATGTTATTCTTTGTCTGACGATGACAATTAGTATGCCATATCACTGCAGTTGCAAGCTAAGGAGGATGCGATGGTTAATTTCAAAAGTGAACTTTCAGTCACCGAACTTGAGATTCAGGTATGCTTCTTCTATCTTGGTGTTATTGTAATTTTATTGCTTCAGATGTAGTTCTAAGTATTTGGTGCGTTTGCATAAAGGTTATAAAAACCTATGGATTTGTGCCGTATTAACTGGAATGAGATTTATACTAAATGAAATTGTCTACACTTTGACAATGAAACTTACTGGGAACTAGAAGAGAAAAGTTAAACAGTTGATAATCCAACATTTGTGTGGGACTTCAACTCTAATTACTGGCATTAGCAGCTTATGCAGTATAAAGATAGCTTTTTATTTTATTTGACCTGCAGGCTTTGGCTAGATTGGCTGAAGAAATTGCAAAATCTGCTATCCCTGCTGGTTCAAGAAAAATTAAAGGCAGATATATCCAATCACACCTATTTTCACGTTTGGAAGGTATTATTACCTTTCAATGGCATACAGTGCCAACCTTGTTAGATTGTAGATAAATGCTTATGAAAGAATTTAACCTGACATTTCTATGATTGATGTCTTGATACTTCCGTTCTTAAGCCATAAGTGAAAAATTGAAGGAGCAAATAAAGGGCGTGGAAGCTGTACAAGCCAAAGAGGTTCCTTTATCCTGGGTTGGGGTAGCAGAGGTGAGTTATTGAATAAGTTTCTTCTTTATCTGCTAACCATGTTGGAACTGTGGAATTCCTGACAATTGAAAGCTGTACAATCGAAATGACATGCATCCCCTGGTTAAAATTCTTGTGTGCATTGTGAAAATTGAAAACTTCGAAGCTGTTTCAGTTAGTCTGGTGTTACTATCTCTTCTTTTCGGCCCATTGAGATTGAAGTGGAAGCAGTATTATATCATTTCCCCTGGTTCTTCATTACTGCATGATCTTTCATACCTGTCCATTGTGCGCCCCCCCCCCCCCCCCCCCCATTTGGTATTTTAGGCTGGATTCCTAAATCATATAGCTGGAGTAGTATTAAAGTTCTATTTTGTTCATATTTCCTGCCAAATTCCTTATATGTACAAGGACTTCTGATCCAGAAGTTGGCACCGAGTTTTCTGCTACCACTTAATATGTTTTTCATTGGATACACGCTCCAGAAATTGACACCGAGCTTTCTCTATCACTTAAAATGTTTTTCATTGGATACACACTTTGGCAGTCGATTACAGAAGGCGTTAAATATGACCTTGAATTTTGATCGTCTTTAGAGTGTGCAAGTAATGGGCTCCTTTGATGGTTGGAGTCAAGGAGAGCACTTATCTCCAGAGTACACCGGCTCTTATATGAACTTTTCAGCTACATTGTTCCTAAGACCTGGAAGGTGCGTTTCTCTTCTGCCACTGAGTTAAATCTGTCATTGCACTCTCTCTGAACTCTCAAGTGAAATTTTAAAAAATAATAATATATTTGTATTTTTAGGTACGAAATTAAGTTCTTGGTAGATGATGAGTGGAAACTATCCCCAGAATTACCAACTACCGGAGAGGGGTTAACTAAGAACAATTTATTGGTCGTGGAATAGCTCATTTAGCTAGGACAGGTGCTGAAAGTTTGTACTATAGGTGGAAAAACAACTTGTTAATCGTCGTACAGTTGATCTCAGGACTCTTAAGCAGCGTATGTATGATACTTAACTATCAGCTAGCTTTCAAGTCATACAATTGTATAAGCTTCAGCCATATATATATATATATATATTCGTTTTTTCTTGAATTTTAAAAAAGGGAGGATTTGATTCAACAGGTAGCTCATGAGGTGGGATTGCTCAAGACATCTAATTCGCTCGACCTACTATTAACTCAAAGTGTTGAAGGTATATATAATAGACCAGACCTCCTAAAGTGGTGGTATAAAGGGCGATCCAAGACTTCCGTTTTTCTCTTATAAAGTCTTGAGTTGAATGTTCAGACTCTTTCGAAAATGTTTGGAAGCTTTTGGTAAAAAGGTTTATTTTTAAAAAAGTGAGGTATTTATTTGGCTGAGCTTTTATTTTTTAAAATAAGTTGTACTATCACCACAAATTTAAGTGAAATGATTCTGTTCGATTTATCAGATGAATCTGATAATAAATGTCTCCAATTTTGTATGATTTACATCTAACCCACCTCCATTGTTAATAGTTAGTAGTCCGTACATTAAACTTTGATGATTCAAAAAAATCAGAGCCGCGACTTTATTATTTAGTATATACAACAACCCTAA</genome_strand>
        <mrna_strand>GGTTTTCCTAGGTGATTTCTTCAACCCTGGAAAATTTTTATTTTAGGGTTTTCTTTTTCTTGGTTTGGGGACTCCAATTATACTGCAATGTGGAATCTTGATATGCATTCTCTCTCAATCTTGAACTGTATAGGTTCAACTACACTGATTTTGAATGTTGAATCCATCTTTTTATGTTTATGATTTTTTATTACCAATTTGTGTTTCCTTTTATTCTTTAATCTCCTTATGCATTATTCTGATCATACAATCTTGATCAAGAAAATGCTGACATATTCTGAATTTGTCTTTTTAATGGCAATGATAAGGTTCAAGGTGGAAAATATCGATGGAGTTAGAGGAAATATGACTTCATATAAATCAAGAATAGGTTTCTGTAGGATGCATACATTATTTTCAGTCCCTAATTGGAAACTCAGCATCCCATGTACTTCTTGGAAAATATTTTGTGCCCCTGAAAATTCACTGGCAGTATCCGAGAAAATAGAAGACGCTGGTCTGTCTGATCCTGAACAAGTTCCTGAGCAACCTTTGAGAACCGAAGAC....................................................................................................................................................................................TTGAAGTTATTGCTTGCTGATGCTGAAAGATCGAAGCTTCTCAAGAAATTGAGTGAAGCCAACCGATATAATCGGTTGCTTAAGCGAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAAGCTAAGGAGGATGCGATGGTTAATTTCAAAAGTGAACTTTCAGTCACCGAACTTGAGATTCAG.....................................................................................................................................................................................................................................................................................................GCTTTGGCTAGATTGGCTGAAGAAATTGCAAAATCTGCTATCCCTGCTGGTTCAAGAAAAATTAAAGGCAGATATATCCAATCACACCTATTTTCACGTTTGGAAG.....................................................................................................................CCATAAGTGAAAAATTGAAGGAGCAAATAAAGGGCGTGGAAGCTGTACAAGCCAAAGAGGTTCCTTTATCCTGGGTTGGGGTAGCAGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTGCAAGTAATGGGCTCCTTTGATGGTTGGAGTCAAGGAGAGCACTTATCTCCAGAGTACACCGGCTCTTATATGAACTTTTCAGCTACATTGTTCCTAAGACCTGGAAG..................................................................................................GTACGAAATTAAGTTCTTGGTAGATGATGAGTGGAAACTATCCCCAGAATTACCAACTACCGGAGAGGGGTTAACTAAGAACAATTTATTGGTCGTGGAATAGCTCATTTAGCTAGGACAGGTGCTGAAAGTTTGTACTATAGGTGGAAAAACAACTTGTTAATCGTCGTACAGTTGATCTCAGGACTCTTAAGCAGC..............................................................................................................................GTAGCTCATGAGGTGGGATTGCTCAAGACATCTAATTCGCTCGACCTACTATTAACTCAAAGTGTTGAAGGTATATATAATAGACCAGACCTCCTAAAGTGGTGGTATAAAGGGCGATCCAAGACTTCCGTTTTTCTCTTATAAAGTCTTGAGTTGAATGTTCAGACTCTTTCGAAAATGTTTGGAAGCTTTTGGTAAAAAGGTTTATTTTTAAAAAAGTGAGGTATTTATTTGGCTGAGCTTTTATTTTTTAAAATAAGTTGTACTATCACCACAAATTTAAGTGAAATGATTCTGTTCGATTTATCAGATGAATCTGATAATAAATGTCTCCAATTTTGTATGATTTACATCTAACCCACCTCCATTGTTAATAGTTAGTAGTCCGTACATTAAACTTTGATGATTCAAAAAAATCAGAGCCGCGACTTTATTATTTAGTATATACAACAACCCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U589827" ref_strand="+" ref_description="SGN-U589827 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|94442914|emb|CAJ91133.1| (e_value=4e-11) ampk; ">
      <seq>cggccgggagacctccaagtccatcccttctggccctcactaatatttgataagtgtggaaacatagtctctggtactcaggtcctgttaataactcgcatggttaggcctttggaagcatattcacagcttatgtcaaacttttaagctaacataaagattaaggtggggaatcctagatatacatggttttggagagatgcttggataggtcacagaccttcaaaaatcaaataccaggacctttatttgtttcactactaaaacaggtagtctggcctcagattgttggaatgggggatgctggtgcattacttttagaaggatttgttttgattgggagatacctaaatggctctcctattggctgatttagataaggtggagctttgtgtgaagtatcttgagtctataatccagggaagtggggatcgacaatgatatgacacatcgtattggtgcagcatagatgaagtggagacttgcatccggagtcttgtgtgataaaaaagtaccactgaaacttaaaggtgttgttttatagagtggtggttagaacgacttccttgaattccggtgatcagttttatatagtaagatctgtttctgagatttctggatgcgataggtgaactaaactcatagatattgcaagctaaggaggatgcgatggttaatttcaaaagtgaactttcagtcaccgaacttgagattcaggctttggctagattggctgaagaaattgcaaaatctgctatccctgctggttcaagaaaattaaaggcagatatatccaatcacacctattttcacgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0073P13.2" temp_strand="+" temp_description="C02HBa0073P13.2  AC215377.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0073P13 sequenced_by:kribb upload_account_name:korea">
        <position start="37263" stop="39078"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37555" g_stop="38202" g_length="648"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="648" r_length="648" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38203" i_stop="38316" i_length="114">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38317" g_stop="38385" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="649" r_stop="717" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="38386" i_stop="38678" i_length="293">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="38679" g_stop="38778" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="718" r_stop="816" r_length="99" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0073P13.2" gen_strand="+" ref_id="SGN-U589827" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>817</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0073P13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U589827" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37555" e_stop="38202"/>
          <exon e_start="38317" e_stop="38385"/>
          <exon e_start="38679" e_stop="38778"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCCCTTAGACCTCCAAGTCCATCCCTTCTGGCCCTCACTAATATTTGATAAGTGTGGAAACATAGTCTCTGGTACTCAGGTCCTGTTAATAACTCGCATGGTTAGGCCTTTGGAAGCATATTCACAGCTTATGTCAGACTTTTAAGCTAACATAAAGATTAAGGTGGGGAATCCTAGATATACATGGTTTTGGAGAGATGCTTGGATAGGTCACAGACCTTCGAAGATCAAATACCAGGACCTTTATTTGTTTCACTACTAAGACAGGTAGTCTGGCCTCAGATTGTTGGAATGGGGGATGCTGGTGCATTACTTTTAGAAGGATTTGTTTTGATTGGGAGATACCTAAATGGCTCTCCTATTGGCTGATTTAGATAAGGTGGAGCTTTGTGTGAAGTATCTTGAGTCTATAATCCAGGGAAGTGGGGATCGACGATGATATGACACATCGTATTGGTGCAGCATAGATGAAGTGGAGACTTGCATCCGGAGTCTTGTGTGATAAAAAAGTACCACTGAAACTTAAAGGTGTTGTTTTATAGAGTGGTGGTTAGAACGACTTCCTTGAATTCCGGTGATCAGTTTTATATAGTAAGATCTGTTTCTGAGATTTCTGGATGCGATAGGTGAACTAAACTCATAGATAGTTGGGTTAAGTTAAAGGTTTATGACTACAGAAAAATAATGGAAAATGTGCTATATGGAAACTCTATGTTATTCTTTGTCTGACGATGACAATTAGTATGCCATATCACTGCAGTTGCAAGCTAAGGAGGATGCGATGGTTAATTTCAAAAGTGAACTTTCAGTCACCGAACTTGAGATTCAGGTATGCTTCTTCTATCTTGGTGTTATTGTAATTTTATTGCTTCAGATGTAGTTCTAAGTATTTGGTGCGTTTGCATAAAGGTTATAAAAACCTATGGATTTGTGCCGTATTAACTGGAATGAGATTTATACTAAATGAAATTGTCTACACTTTGACAATGAAACTTACTGGGAACTAGAAGAGAAAAGTTAAACAGTTGATAATCCAACATTTGTGTGGGACTTCAACTCTAATTACTGGCATTAGCAGCTTATGCAGTATAAAGATAGCTTTTTATTTTATTTGACCTGCAGGCTTTGGCTAGATTGGCTGAAGAAATTGCAAAATCTGCTATCCCTGCTGGTTCAAGAAAAATTAAAGGCAGATATATCCAATCACACCTATTTTCACGTT</genome_strand>
        <mrna_strand>CGGCCGGGAGACCTCCAAGTCCATCCCTTCTGGCCCTCACTAATATTTGATAAGTGTGGAAACATAGTCTCTGGTACTCAGGTCCTGTTAATAACTCGCATGGTTAGGCCTTTGGAAGCATATTCACAGCTTATGTCAAACTTTTAAGCTAACATAAAGATTAAGGTGGGGAATCCTAGATATACATGGTTTTGGAGAGATGCTTGGATAGGTCACAGACCTTCAAAAATCAAATACCAGGACCTTTATTTGTTTCACTACTAAAACAGGTAGTCTGGCCTCAGATTGTTGGAATGGGGGATGCTGGTGCATTACTTTTAGAAGGATTTGTTTTGATTGGGAGATACCTAAATGGCTCTCCTATTGGCTGATTTAGATAAGGTGGAGCTTTGTGTGAAGTATCTTGAGTCTATAATCCAGGGAAGTGGGGATCGACAATGATATGACACATCGTATTGGTGCAGCATAGATGAAGTGGAGACTTGCATCCGGAGTCTTGTGTGATAAAAAAGTACCACTGAAACTTAAAGGTGTTGTTTTATAGAGTGGTGGTTAGAACGACTTCCTTGAATTCCGGTGATCAGTTTTATATAGTAAGATCTGTTTCTGAGATTTCTGGATGCGATAGGTGAACTAAACTCATAGATA..................................................................................................................TTGCAAGCTAAGGAGGATGCGATGGTTAATTTCAAAAGTGAACTTTCAGTCACCGAACTTGAGATTCAG.....................................................................................................................................................................................................................................................................................................GCTTTGGCTAGATTGGCTGAAGAAATTGCAAAATCTGCTATCCCTGCTGGTTCAAG-AAAATTAAAGGCAGATATATCCAATCACACCTATTTTCACGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U581543" ref_strand="+" ref_description="SGN-U581543 Tomato 200607#2 [48 ESTs aligned] (*GB) gi|1707998|sp|P50433|GLYM_SOLTU (e_value=0) SERINE HYDROXYMETHYLTRANSFERASE, MITOCHONDRIAL PRECURSOR (SERINE METHYLASE) (GLYCINE HYDROXYMETHYLTRANSFERASE) (SHMT); (*ATH) AT4G37930.1 (e_value=0)  Symbol: None | glycine hydroxymethyltransferase / serine hydroxymethyltransferase / serine/threonine aldolase (SHM1), identical to serine hydroxymethyl transferase (Arabidopsis thaliana) GI:6899945 | chr4:17831740-17834859 REVERSE | Aliases: F20D10.... ; (*SWP) sp|P50433|GLYM_SOLTU (e_value=0) Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum; ">
      <seq>tgcaatggctatggcaatagctcttcggaggctttctgctacaattgacaagccagttaagagtctttacaatggaggctctatctattacatgtcatcactgcctaatgaagctgtatacgacaaggaaaaatccggagtagcttggccaaagcaactgaatgctccactagaggttgttgatcctgagattgctgacattattgagcatgagaaagcacgccaatggaaggggctcgaactcattccatcagaaaatttcacttccgtttcggtgatgcaagcagttggatcagtcatgactaacaagtacagtgaaggatatcctggtgccagatactatggaggaaatgagtacatagacatggcagaaaccttatgccagaaacgtgctttggaagcattcaggttggatcctgcaaaatggggagtgaatgtgcagcctctatcaggatcacccgctaattttcatgtttacactgcattattaaaacctcatgagagaatcatggctcttgatcttcctcatggtggacatctttctcatggatatcagactgatacaaagaagatatctgcagtctctatattctttgagacaatgccatacagactcgatgagagcactggatatattgactatgaccagctcgagaaaagtgccacactctttaggccaaaattgattgttgctggtgctagtgcctacgcacgtctttatgactatgacagaatccggaaggtttgcaacaaacagaaagctattttgttagcagatatggcacacattagtggattggttgcagctggagttatcccatcaccatttgactatgctgatgttgtcactaccacaacccacaagtcccttcgtggccctcgtggtgctatgattttttataggaagggtgttaaagaggttaacaagcaaggcaaggaggttttctacgactatgaagacaaaattaaccaggcagtctttcctggacttcaaggtggtccccacaatcacaccatcactggattggcagttgccttgaaacaggccactactccagaatacagagcttaccaagagcaagttctcagcaactccgcgaaatttgcccaggctttagaggagaagggctatgaacttgtctctggaggaactgataatcacttggttttggtgaacatgaaaaacaagggtattgatggttccagggttgaaaaagtcttggaagctgtacatattgcagccaacaagaacaccgttcctggagatgtttctgccatggtccctggtggcatcagaatgggaactcctgcactcacttctcggggatttcttgaggaagattttgttaaagttgctgatttctttgatgctgctgtgaagatagcagtgaaagtaaaggctgaaactcaagggacaaagttgaaagactttgtatcaacactagaatccagtgctccaatcaagtctgaaattgcaaaactccgtcaggatgtggaggagtatgctaagcagttccctacaattgggtttgagaaggaaaccatgaagtacaaaaactaagaggtacatacacaaggaacgtcattgaggcacctaatatcaagcttcagaaaggtgaaaggggaagaaaatccaaccatgaattgctttcaagtacatgttctcatgcttatatattgtaaagaaatccagcacatgttggttcccatgtatgcagtttgtatattaatcacttacagtccaactgaggtcctttttaaagcaataaacttttgttacctttgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0073P13.2" temp_strand="+" temp_description="C02HBa0073P13.2  AC215377.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0073P13 sequenced_by:kribb upload_account_name:korea">
        <position start="60057" stop="67152"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60357" g_stop="60450" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60451" i_stop="60544" i_length="94">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60545" g_stop="60595" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="145" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60596" i_stop="60685" i_length="90">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60686" g_stop="60772" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="232" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60773" i_stop="61579" i_length="807">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.796" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="61580" g_stop="61701" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="354" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="61702" i_stop="61820" i_length="119">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="61821" g_stop="61897" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="355" r_stop="431" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="61898" i_stop="61985" i_length="88">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="61986" g_stop="62110" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="556" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="62111" i_stop="62779" i_length="669">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="62780" g_stop="62872" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="557" r_stop="649" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="62873" i_stop="63387" i_length="515">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="63388" g_stop="63480" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="650" r_stop="742" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="63481" i_stop="63598" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="63599" g_stop="63796" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="743" r_stop="940" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="63797" i_stop="63927" i_length="131">
            <donor d_prob="0.765" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="63928" g_stop="64032" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="941" r_stop="1045" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="64033" i_stop="64618" i_length="586">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="64619" g_stop="64684" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1046" r_stop="1111" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="64685" i_stop="65129" i_length="445">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="65130" g_stop="65207" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1112" r_stop="1189" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="65208" i_stop="65451" i_length="244">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="65452" g_stop="65563" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="1190" r_stop="1301" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="65564" i_stop="65643" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="65644" g_stop="65754" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1302" r_stop="1412" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="65755" i_stop="66131" i_length="377">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="66132" g_stop="66309" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1413" r_stop="1590" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="66310" i_stop="66654" i_length="345">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="66655" g_stop="66852" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="1591" r_stop="1788" r_length="198" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0073P13.2" gen_strand="+" ref_id="SGN-U581543" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1788</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0073P13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U581543" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60357" e_stop="60450"/>
          <exon e_start="60545" e_stop="60595"/>
          <exon e_start="60686" e_stop="60772"/>
          <exon e_start="61580" e_stop="61701"/>
          <exon e_start="61821" e_stop="61897"/>
          <exon e_start="61986" e_stop="62110"/>
          <exon e_start="62780" e_stop="62872"/>
          <exon e_start="63388" e_stop="63480"/>
          <exon e_start="63599" e_stop="63796"/>
          <exon e_start="63928" e_stop="64032"/>
          <exon e_start="64619" e_stop="64684"/>
          <exon e_start="65130" e_stop="65207"/>
          <exon e_start="65452" e_stop="65563"/>
          <exon e_start="65644" e_stop="65754"/>
          <exon e_start="66132" e_stop="66309"/>
          <exon e_start="66655" e_stop="66852"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAATGGCTATGGCAATAGCTCTTCGGAGGCTTTCTGCTACAATTGACAAGCCAGTTAAGAGTCTTTACAATGGAGGCTCTATCTATTACATGGTTTGTATTTATAACTTGTTTATTTATTATTTATAGTAGTACTATGTATTACTTTTCCTTTTAAGTTATATTTACTTTGCGTTGTTTGTTGCAGTCATCACTGCCTAATGAAGCTGTATACGACAAGGAAAAATCCGGAGTAGCTGTAAGTTCATGATGAATTGGAATAGATGTGTTATCTGAACTTTTGCTTGTGTTCTTTTCATTTCTGAGTTGAAATCCTGAATACTTTCAGTGGCCAAAGCAACTGAATGCTCCACTAGAGGTTGTTGATCCTGAGATTGCTGACATTATTGAGCATGAGAAAGCACGCCAATGGAAGGTTCTATCGCCTTCTCTTTTCTTTTTCTTTCCATCTCTCACTCACTGAAGCTTACCGCAAAGGAATTAAGGCTCAGACTGTAGCAAATTAGAACATTTAACTAGTAATACTTGGGAACCTGTGCCAAACATTGATGTTTCAGTTTCAATAAACAAGTCTATATGAAACCTTGCATGCTTTCTCGGCGCACGAGGCTTATCTAGTGTGGTTTACTTTCTGCTGTGATTTACGGGCTATTACACTGGAGCATGGTTTACCCTATGTGCATCCAAAGTGTAGTGGTTGTGGGTTCCCTTGTCATAAAAAAAATAAAGAAGCCTATATGAAATATCTTTTAGATATATTTAGTATCGGTGATGTCCATGTGAGTTTGCCCACACCTCAATTATTCCACCAAATATTGGCTACCTAGGGTCGGTACAGCTAACAGGGGATATTCTGCCCCCAAAGGCTTAGATAGATGGGGAAAAATTACCTGGTGTTGTTTGTGTCGGCTGGGATTTGGCTCCGGGTATGCCATTGTTTTGACTCCCTTTATTGTCCTCCAGACTACACCTTTGAGTAAAACTGCCTTTCAGATTACTTCATGGGGAGTTCCAACTTCCAACTGCTGAAATTAATTTAACTTATCAATCTCCTGTTAAGAGCATTGAATGCTAAGAATTATATAGTATGTCTCATTTCTTTTACTCTTCTTATCACGTATAGCATCCATTCTGCTAGTTATCTTTCTTTTGTTTAAGATGCGAAGAAGCAGTTAGCTATGGAAGTTAAATGTCTTACCTAAGTTCAAAATGCTTTCTTTAGGGGCTCGAACTCATTCCATCAGAAAATTTCACTTCCGTTTCGGTGATGCAAGCAGTTGGATCAGTCATGACTAACAAGTACAGTGAAGGATATCCTGGTGCCAGATACTATGGAGGAAATGAGTACGCACAATATTTGCTATTTTTTAACTCTTAAGACTTTTGTCATTAACCTGTATTTTCATGTCATATATCAACTTCAGATTTTATTTTAACATTATGAAGAATGGGTGGCTGTCCAGGTACATAGACATGGCAGAAACCTTATGCCAGAAACGTGCTTTGGAAGCATTCAGGTTGGATCCTGCAAAATGGGGAGGTAATAAATTTTGTTCTATTATGTTTCATCGTCTAAATAGTGCTAGAAACTAAAAGTACTCATCTCAATTAACCTTTTCTTATTGCAGTGAATGTGCAGCCTCTATCAGGATCACCCGCTAATTTTCATGTTTACACTGCATTATTAAAACCTCATGAGAGAATCATGGCTCTTGATCTTCCTCATGGTGGACATCTTTCTCATGGATATCAGGTGCTTCTATATTTTGTTGTTTCTCGTCGTATATGACTGGTTTCTGTTGTTGCAAACTAATACCATTACTTAAAAAAGTGTGGGCACTTAAGAAGCTTGCACTAGTATTTGTGGTGTAAATACTGTAATCCTTCTAGGGTCCTTTGTAATAGGCAATTAATGTTTTCTGGGCTTCTATGAGGTGCATTTACTACTTATGTTCCTCTGCCTTACCATTCTCGTGGATGAGGAATTTCACTCGGACAAAGGCCAACATCCCATAAATTTTATCTGATATGTGAGTAAAGGACAATTTAAACTGAAATGCTGTTAAATATGGCTGTATGCAATTTCTGTCAGGTTGTTTTATATATTGCATTGATCTTTGATAGTTAAAATGTTCTGTATGCTTTTCCGCTTTAGAAGAGCAAACTTTTCTGCTTTAAAATCACGCATGATCTTAAAAATGGAAGTTATTGCTGGTAAAATTTGAGAAAAATGAAGTTAAAACACATGTGAGTTGATGCATATATGAGTCCATGTCCCAATTATGTTCATACATTCCATACAGATCTGGAGTTAGAGTCAGCTTATTTTTGGAAAACCTTGATTTCTTCTTTCTAGTGCAATTATTGTTTGATTTAATTTTAGTTACATTAATACAGCATGTCTTATGTTTATTAATCACAGACTGATACAAAGAAGATATCTGCAGTCTCTATATTCTTTGAGACAATGCCATACAGACTCGATGAGAGCACTGGATATATTGACTATGACCAGGTAGTTTTCTGCTTTCTTATAGTTCTATTCATTTGATCTCTACCCTTCACCCTCTCCTTTTGAATGGCGTACCCCTATAATCATATTCAGCATTGTAAATCAAATTTCTTTTTAAGAGTTCGTTTTCATTCGTCAAAAGTTATGTAGAGTCACTAAGTATAATATAGCATGATGAAAACTAGAAGTAATTTAATGCGATATCAGAAAGTCCATCTTGATTCAGCATAATATGATGTCCAGATAACTTGTCATTAGTATGAGACAATAAGTTGGAGCTAGCATTGCCTCCATTATTTTATTTTTCAGATTATTTTGATGTTTCTTTTACTTCTTACAACTGATTTTTCATCTGGTTATGTTAGCTAGTGTAATAGAAACTTGTCAGTCATAAATGTTTATTCAGATAATCAGTACTATTGAAGGCTAATCCACTTCACTGTGTGCTTGTAATGTTAGATTTTTATTAACGGATACCTATTCTCTTTTAACATTTCATGACTTATCTTTTTCTGCAGCTCGAGAAAAGTGCCACACTCTTTAGGCCAAAATTGATTGTTGCTGGTGCTAGTGCCTACGCACGTCTTTATGACTATGACAGAATCCGGAAGGTTAACTTTACTTTACCATAGTGCAATATATACTTAATTGTCTATATTAAGTTAAGGTGATAACTCGATAAATTTTAGAGAAGGCATTTGAACTTGTGCCTTTTTGCATATCTGGCAGGTTTGCAACAAACAGAAAGCTATTTTGTTAGCAGATATGGCACACATTAGTGGATTGGTTGCAGCTGGAGTTATCCCATCACCATTTGACTATGCTGATGTTGTCACTACCACAACCCACAAGTCCCTTCGTGGCCCTCGTGGTGCTATGATTTTTTATAGGAAGGGTGTTAAAGAGGTTAACAAGCAAGGCAAGGAGGTTAGTTAAAGAGCACAGTTCCACTTAAACTGTCACCTCAGCATCACATCTCCTAATATTTAACCAGTTTCATGTGGCCGACTAACTAGTGTCAAAACTAATATCATAATTATTTTATGCTAATTTTGAAGGTTTTCTACGACTATGAAGACAAAATTAACCAGGCAGTCTTTCCTGGACTTCAAGGTGGTCCCCACAATCACACCATCACTGGATTGGCAGTTGCCTTGAAACAGGTTTCATATCTTTACAACTACATTTTTGATAGTTCAGTTAATTGTATAGCTACTGGCTAAGTAAAGGATCTTCTTACTTATTATTTAGGGATGTGAGAGATCTCTGTGTGCTAGCCGAAGAACTAAGCCTTTTGAGATTTAAAAGCTGAAGGCTTTTGACCTTAGTTCAGCAAATGATTTTGTGTAACAAGCAGAATACAGAGCACTTATTGTCCCGGAATTTCACTAACACCCGCAGATAGCACTTCTGATGTCTTACTAAATTGTTCCTTTTTTGCTTAAAGTGTGAAAAACATGATTATACTAAGCAGCTTGTCAAGGAATGCAACTTAAAGATGGAATAGGTCTAAAAACAAAGATAAATGTCATTTATGTACTAATATTCAAAGAGTTTTGAGGTTTTGGAAGAACCGATCTCTCTAACCATGGGAATTTCTTCTTACTCCTTGTTGGCTTCAGTACTTTCTGAAATAGCTTCACTTAACTCGAAAAACATTCCATTATGCTCTTGAGTATTTTTTAGGTAATTATGAAAATTATTGTGATGGTGCTTGTTCTCACTATGCTTCTAATTTACTAAATGCAGGCCACTACTCCAGAATACAGAGCTTACCAAGAGCAAGTTCTCAGCAACTCCGCGAAATTTGCCCAGGTAAAGTCAATGAAATATGCAGTTCCCAGAAGCATAGTGAAATCCATAGTTTATTTTTGGGAAAATGCACAAGTACCCCACAACCTATGCCTGAAATTCCAGATAAACACTTATGCTAAACTAAAGTCCTACCTTTTACCCCCGAACTTATTTTTATAAATAATTTTCTACCCTTTTTCGACGTGGCACTATCTTTGAAATATAGTCAGCACGCGCTGTGTCCAAAAGATAGTTCCACGTAGGCCGAAAAGGGGTAAAAAGTTATTTATAAAATGAGTTCATGGGGGTAATAAGACTTTAATATAGTATGAGTGTCTCTGAGATTTCGAGCATAGATTGGGGTATTTATTCCATTCATTTTTAAAAGAACTATAAATTATGGTTGACTTATTATCTCCATAATATTGCTTTCTTCATTCCTGCTGCATATTTTTCAATCCTGCAGGCTTTAGAGGAGAAGGGCTATGAACTTGTCTCTGGAGGAACTGATAATCACTTGGTTTTGGTGAACATGAAAAACAAGGTAAAGTACGAACTCCTAGGAAAAGGGAGAAATCTTCCTCGTGAGTTGTCTGTGAGGACTACTAAGTTTAACAATTGCTTTTGATGAATTAAAATTTGAGCAATACAGTTATTACAGTGAGCTCTTTTGAAGATCAGCTGAGATATTAGTGCATGAGGTTGCTGCATGTTATATATTGGCATCTGTTATGCTCTATCACGAAAGAAATAATACAATGCAAGTACTGAACCTGGTCCTTTTACAGGGTATTGATGGTTCCAGGGTTGAAAAAGTCTTGGAAGCTGTACATATTGCAGCCAACAAGAACACCGTTCCTGGAGATGTTTCTGCCATGGTCCCTGGTGGCATCAGAATGGGTAAGACCTCTCTCTTTGATATCTTCTTCATTAGTTATTCTTCCTTGTAAGCAAACTCCGCTAAAACTATTTTTAATCAGGAACTCCTGCACTCACTTCTCGGGGATTTCTTGAGGAAGATTTTGTTAAAGTTGCTGATTTCTTTGATGCTGCTGTGAAGATAGCAGTGAAAGTAAAGGCTGAAACTCAAGGTGTGTAAGATTTACACGTTTGTGTAGTTAGGTTGACCTATTACAAGATGGAACTCTCCATATTGAAGTATGATACAGTAACCTGGAAAACAAAGTAATAATGTGCAATGATCAATTGAGCTTTACCAATAGTGTAAATATTCTTAACACTGTCAATGCATATGAATTAAATCTCATAAAACAATACCTTGTCTATAGATGTCCGACTTATTAGTTATGCATAAGTATGTGTTGTTCTTTTTATTATCACCCTTTTAGTTCTTTAGTCTAAGGGCTTGGATTTTGTTACCTCAAATGCTTGATCATTTGAATTTGTGTGGTTTTTCAAAACTGCGAACAACTTCCACTGTTACCATAATACCATCTTCTTGTATCAGGGACAAAGTTGAAAGACTTTGTATCAACACTAGAATCCAGTGCTCCAATCAAGTCTGAAATTGCAAAACTCCGTCAGGATGTGGAGGAGTATGCTAAGCAGTTCCCTACAATTGGGTTTGAGAAGGAAACCATGAAGTACAAAAACTAAGAGGTACATACACAAGGAACGTCATTGAGGTACTTTGTTTCGTCATTAACTGTATCCCTTTGACTATGATGAGCCACAAAGCAATCAAAATTTATGAAAACATTATGGTACTTCAAATCAGATAACCTGTGATGTGAAAGCACAAGGATCATTTTATATGCAATGAGATTGGAATATTATCAGCAAATATTCAGCATAATAATATGGATCTGAAAGAAACTTGGACATGTTTGGTTTGCTTGTGTAGTAGTTCATACTTCAGATCAGATTTACTCCTTTATACCCTATTCAAATGTGGTTATTTTCCTTGCTCTTCATTTTCATTTGAGACTCATTTGTTCTCTTTTCCCGTTTGTGGTTTGTTCGTGTAACAGGCACCTAATATCAAGCTTCAGAAAGGTGAAAGGGGAAGAAAATCCAACCATGAATTGCTTTCAAGTACATGTTCTCATGCTTATATATTGTAAAGAAATCCAGCACATGTTGGTTCCCATGTATGCAGTTTGTATATTAATCACTTACAGTCCAACTGAGGTCCTTTTTAAAGCAATAAACTTTTGTTACCTTTGCTG</genome_strand>
        <mrna_strand>TGCAATGGCTATGGCAATAGCTCTTCGGAGGCTTTCTGCTACAATTGACAAGCCAGTTAAGAGTCTTTACAATGGAGGCTCTATCTATTACATG..............................................................................................TCATCACTGCCTAATGAAGCTGTATACGACAAGGAAAAATCCGGAGTAGCT..........................................................................................TGGCCAAAGCAACTGAATGCTCCACTAGAGGTTGTTGATCCTGAGATTGCTGACATTATTGAGCATGAGAAAGCACGCCAATGGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCTCGAACTCATTCCATCAGAAAATTTCACTTCCGTTTCGGTGATGCAAGCAGTTGGATCAGTCATGACTAACAAGTACAGTGAAGGATATCCTGGTGCCAGATACTATGGAGGAAATGA.......................................................................................................................GTACATAGACATGGCAGAAACCTTATGCCAGAAACGTGCTTTGGAAGCATTCAGGTTGGATCCTGCAAAATGGGGAG........................................................................................TGAATGTGCAGCCTCTATCAGGATCACCCGCTAATTTTCATGTTTACACTGCATTATTAAAACCTCATGAGAGAATCATGGCTCTTGATCTTCCTCATGGTGGACATCTTTCTCATGGATATCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGATACAAAGAAGATATCTGCAGTCTCTATATTCTTTGAGACAATGCCATACAGACTCGATGAGAGCACTGGATATATTGACTATGACCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGAGAAAAGTGCCACACTCTTTAGGCCAAAATTGATTGTTGCTGGTGCTAGTGCCTACGCACGTCTTTATGACTATGACAGAATCCGGAAG......................................................................................................................GTTTGCAACAAACAGAAAGCTATTTTGTTAGCAGATATGGCACACATTAGTGGATTGGTTGCAGCTGGAGTTATCCCATCACCATTTGACTATGCTGATGTTGTCACTACCACAACCCACAAGTCCCTTCGTGGCCCTCGTGGTGCTATGATTTTTTATAGGAAGGGTGTTAAAGAGGTTAACAAGCAAGGCAAGGAG...................................................................................................................................GTTTTCTACGACTATGAAGACAAAATTAACCAGGCAGTCTTTCCTGGACTTCAAGGTGGTCCCCACAATCACACCATCACTGGATTGGCAGTTGCCTTGAAACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCACTACTCCAGAATACAGAGCTTACCAAGAGCAAGTTCTCAGCAACTCCGCGAAATTTGCCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTAGAGGAGAAGGGCTATGAACTTGTCTCTGGAGGAACTGATAATCACTTGGTTTTGGTGAACATGAAAAACAAG....................................................................................................................................................................................................................................................GGTATTGATGGTTCCAGGGTTGAAAAAGTCTTGGAAGCTGTACATATTGCAGCCAACAAGAACACCGTTCCTGGAGATGTTTCTGCCATGGTCCCTGGTGGCATCAGAATGG................................................................................GAACTCCTGCACTCACTTCTCGGGGATTTCTTGAGGAAGATTTTGTTAAAGTTGCTGATTTCTTTGATGCTGCTGTGAAGATAGCAGTGAAAGTAAAGGCTGAAACTCAAG.........................................................................................................................................................................................................................................................................................................................................................................................GGACAAAGTTGAAAGACTTTGTATCAACACTAGAATCCAGTGCTCCAATCAAGTCTGAAATTGCAAAACTCCGTCAGGATGTGGAGGAGTATGCTAAGCAGTTCCCTACAATTGGGTTTGAGAAGGAAACCATGAAGTACAAAAACTAAGAGGTACATACACAAGGAACGTCATTGAG.........................................................................................................................................................................................................................................................................................................................................................GCACCTAATATCAAGCTTCAGAAAGGTGAAAGGGGAAGAAAATCCAACCATGAATTGCTTTCAAGTACATGTTCTCATGCTTATATATTGTAAAGAAATCCAGCACATGTTGGTTCCCATGTATGCAGTTTGTATATTAATCACTTACAGTCCAACTGAGGTCCTTTTTAAAGCAATAAACTTTTGTTACCTTTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U577517" ref_strand="-" ref_description="SGN-U577517 Tomato 200607#2 [10 ESTs aligned] (*GB) gi|1707998|sp|P50433|GLYM_SOLTU (e_value=8e-59) SERINE HYDROXYMETHYLTRANSFERASE, MITOCHONDRIAL PRECURSOR (SERINE METHYLASE) (GLYCINE HYDROXYMETHYLTRANSFERASE) (SHMT); (*ATH) AT4G37930.1 (e_value=6e-54)  Symbol: None | glycine hydroxymethyltransferase / serine hydroxymethyltransferase / serine/threonine aldolase (SHM1), identical to serine hydroxymethyl transferase (Arabidopsis thaliana) GI:6899945 | chr4:17831740-17834859 REVERSE | Aliases: F20D10.... ; (*SWP) sp|P50433|GLYM_SOLTU (e_value=6e-60) Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum; ">
      <seq>tggttttggtgaacatgaaaaacaagggtattgatggttccagggttgaaaaagtcttggaagctgtacatattgcagccaacaagaacaccgttcctggagatgtttctgccatggtccctggtggcatcagaatgggaactcctgcactcacttctcggggatttcttgaggaagattttgttaaagttgctgatttctttgatgctgctgtgaagatagcagtgaaagtaaaggctgaaactcaagggacaaagttgaaagactttgtatcaacactagaatccagtgctccaatcaagtctgaaattgcaaaactccgtcaggatgtggaggagtatgctaagcagttccctacaattgggtttgagaaggaaaccatgaagtacaaaaactaagaggcacctaatatcaagcttcagaaaggtgaaaggggaagaaaatccaaccatgaattgctttcaagtacatgttctcatgcttatatattgtaaagaaatccagcacatgttggttcccatgtatgcagtttgtatattaatcacttacagtccaactgaggtcctttttaaagcaataaacttttgttacctttgctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0073P13.2" temp_strand="+" temp_description="C02HBa0073P13.2  AC215377.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0073P13 sequenced_by:kribb upload_account_name:korea">
        <position start="64882" stop="67152"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65182" g_stop="65207" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="26" r_length="26" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65208" i_stop="65451" i_length="244">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65452" g_stop="65563" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="138" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65564" i_stop="65643" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65644" g_stop="65754" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="249" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65755" i_stop="66131" i_length="377">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="66132" g_stop="66283" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="401" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="66284" i_stop="66654" i_length="371">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="66655" g_stop="66853" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="402" r_stop="600" r_length="199" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0073P13.2" gen_strand="+" ref_id="SGN-U577517" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>600</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0073P13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U577517" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="65182" e_stop="65207"/>
          <exon e_start="65452" e_stop="65563"/>
          <exon e_start="65644" e_stop="65754"/>
          <exon e_start="66132" e_stop="66283"/>
          <exon e_start="66655" e_stop="66853"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTTTTGGTGAACATGAAAAACAAGGTAAAGTACGAACTCCTAGGAAAAGGGAGAAATCTTCCTCGTGAGTTGTCTGTGAGGACTACTAAGTTTAACAATTGCTTTTGATGAATTAAAATTTGAGCAATACAGTTATTACAGTGAGCTCTTTTGAAGATCAGCTGAGATATTAGTGCATGAGGTTGCTGCATGTTATATATTGGCATCTGTTATGCTCTATCACGAAAGAAATAATACAATGCAAGTACTGAACCTGGTCCTTTTACAGGGTATTGATGGTTCCAGGGTTGAAAAAGTCTTGGAAGCTGTACATATTGCAGCCAACAAGAACACCGTTCCTGGAGATGTTTCTGCCATGGTCCCTGGTGGCATCAGAATGGGTAAGACCTCTCTCTTTGATATCTTCTTCATTAGTTATTCTTCCTTGTAAGCAAACTCCGCTAAAACTATTTTTAATCAGGAACTCCTGCACTCACTTCTCGGGGATTTCTTGAGGAAGATTTTGTTAAAGTTGCTGATTTCTTTGATGCTGCTGTGAAGATAGCAGTGAAAGTAAAGGCTGAAACTCAAGGTGTGTAAGATTTACACGTTTGTGTAGTTAGGTTGACCTATTACAAGATGGAACTCTCCATATTGAAGTATGATACAGTAACCTGGAAAACAAAGTAATAATGTGCAATGATCAATTGAGCTTTACCAATAGTGTAAATATTCTTAACACTGTCAATGCATATGAATTAAATCTCATAAAACAATACCTTGTCTATAGATGTCCGACTTATTAGTTATGCATAAGTATGTGTTGTTCTTTTTATTATCACCCTTTTAGTTCTTTAGTCTAAGGGCTTGGATTTTGTTACCTCAAATGCTTGATCATTTGAATTTGTGTGGTTTTTCAAAACTGCGAACAACTTCCACTGTTACCATAATACCATCTTCTTGTATCAGGGACAAAGTTGAAAGACTTTGTATCAACACTAGAATCCAGTGCTCCAATCAAGTCTGAAATTGCAAAACTCCGTCAGGATGTGGAGGAGTATGCTAAGCAGTTCCCTACAATTGGGTTTGAGAAGGAAACCATGAAGTACAAAAACTAAGAGGTACATACACAAGGAACGTCATTGAGGTACTTTGTTTCGTCATTAACTGTATCCCTTTGACTATGATGAGCCACAAAGCAATCAAAATTTATGAAAACATTATGGTACTTCAAATCAGATAACCTGTGATGTGAAAGCACAAGGATCATTTTATATGCAATGAGATTGGAATATTATCAGCAAATATTCAGCATAATAATATGGATCTGAAAGAAACTTGGACATGTTTGGTTTGCTTGTGTAGTAGTTCATACTTCAGATCAGATTTACTCCTTTATACCCTATTCAAATGTGGTTATTTTCCTTGCTCTTCATTTTCATTTGAGACTCATTTGTTCTCTTTTCCCGTTTGTGGTTTGTTCGTGTAACAGGCACCTAATATCAAGCTTCAGAAAGGTGAAAGGGGAAGAAAATCCAACCATGAATTGCTTTCAAGTACATGTTCTCATGCTTATATATTGTAAAGAAATCCAGCACATGTTGGTTCCCATGTATGCAGTTTGTATATTAATCACTTACAGTCCAACTGAGGTCCTTTTTAAAGCAATAAACTTTTGTTACCTTTGCTGA</genome_strand>
        <mrna_strand>TGGTTTTGGTGAACATGAAAAACAAG....................................................................................................................................................................................................................................................GGTATTGATGGTTCCAGGGTTGAAAAAGTCTTGGAAGCTGTACATATTGCAGCCAACAAGAACACCGTTCCTGGAGATGTTTCTGCCATGGTCCCTGGTGGCATCAGAATGG................................................................................GAACTCCTGCACTCACTTCTCGGGGATTTCTTGAGGAAGATTTTGTTAAAGTTGCTGATTTCTTTGATGCTGCTGTGAAGATAGCAGTGAAAGTAAAGGCTGAAACTCAAG.........................................................................................................................................................................................................................................................................................................................................................................................GGACAAAGTTGAAAGACTTTGTATCAACACTAGAATCCAGTGCTCCAATCAAGTCTGAAATTGCAAAACTCCGTCAGGATGTGGAGGAGTATGCTAAGCAGTTCCCTACAATTGGGTTTGAGAAGGAAACCATGAAGTACAAAAACTAAGAG...................................................................................................................................................................................................................................................................................................................................................................................GCACCTAATATCAAGCTTCAGAAAGGTGAAAGGGGAAGAAAATCCAACCATGAATTGCTTTCAAGTACATGTTCTCATGCTTATATATTGTAAAGAAATCCAGCACATGTTGGTTCCCATGTATGCAGTTTGTATATTAATCACTTACAGTCCAACTGAGGTCCTTTTTAAAGCAATAAACTTTTGTTACCTTTGCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U564240" ref_strand="+" ref_description="SGN-U564240 Tomato 200607#2 [16 ESTs aligned] (*GB) gi|18424970|ref|NP_569013.1| (e_value=8e-157) oligopeptidase A [Arabidopsis thaliana]; (*ATH) AT5G65620.1 (e_value=5e-159)  Symbol: None | peptidase M3 family protein / thimet oligopeptidase family protein, similar to SP:P27237 Oligopeptidase A (EC 3.4.24.70) {Salmonella typhimurium}; contains Pfam profile PF01432: Peptidase family M3 | chr5:26239174-26243549 FORWARD | A... ; (*SWP) sp|P27298|OPDA_ECOLI (e_value=1e-69) Oligopeptidase A OS=Escherichia coli (strain K12) GN=prlC; ">
      <seq>ggttgagccagctgatggattagctccagtttggaacaatgatgtccggttttaccgtgtgaatgattcctctggaagtcctattgcctacttctattttgatccatactctcgtccatctgagaaacgtggcggtgcttggatggatgaagttgttagccgaagccgtgtattatcacgagatggttcgaatgctagattgcctgttgcacacatggtttgtaatcagatgccaccagttggggataaacccagcctaatgacattccgtgaggttgagactgtcttccatgaatttggacatgcccttcagcatatgctaactaagcaggatgagggtttggttgctggcataaggggtgtagagtgggatgctgtggaattgccatcacaattcatggagaattggtgctatcacagggatactctgatgggtattgctaagcatcatgaaactggagagacactcccagaagacatatacaagaagcttcttgctgctaaaactttccgtgctggtaccttaagtcttcggcagttgagatttgctacagttgatcttgagttacatgcaaaatatgttccgggtggttcggaatcaatctattgtgttgaccgacgggtctctaagaaaacccaagtgcttcctccactcccagacgataagttccttgccagtttcagtcacatttttgctggtggatatgctgctggatactacagttacaagtgggcagaggttttgtctgcagatgctttctctgcttttgaagatgttggactagagaatgagaaggctgtaaaagaaacaggccagagattcagggagactgttcttgctcttggcggtggaaaggctccactggaggttttcgtgcaatttagaggacgggaaccttctccagaaccgctgcttaggcataatggcctacttacctcttctgcatgaagattgttgtagaaccattagagacaattgcaactgtatttgttttcaagttattataaagaattcactttagaacaaagcattgctactgatttctcgtctccctttatgccattttgagatcatcatatgccatatatagatttagcaaggaaacaagttcatttgaaaaatcagtaacagatacgaaggaaattgagggattgcctgccacctctcttggtttgacttcacattgaagctctctttgtgggtgttcgacaactaaattaacattgatttctcttttgtgttctctttgctgcctgtaactgataacaggggcacaaaaatgctactgcagaagtcgggccatggatgattacattttggatttatacagattcacaaataccgacttctgttggctttactatttctgcaaaaacacggtaaaaaactatgaatcctaccacttatgtctcagagcaggagtttatcttgttttgagagcgggcggcgtcaaatcagaaggaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0073P13.2" temp_strand="-" temp_description="C02HBa0073P13.2  AC215377.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0073P13 sequenced_by:kribb upload_account_name:korea">
        <position start="77494" stop="71767"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77292" g_stop="77265" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="28" r_length="28" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77264" i_stop="77167" i_length="98">
            <donor d_prob="0.951" d_score="0.00"/>
            <acceptor a_prob="0.908" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77166" g_stop="76921" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="274" r_length="246" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76920" i_stop="76351" i_length="570">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="76350" g_stop="76205" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="420" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="76204" i_stop="75610" i_length="595">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75609" g_stop="75492" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="538" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="75491" i_stop="74707" i_length="785">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.814" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="74706" g_stop="74515" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="539" r_stop="730" r_length="192" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="74514" i_stop="73833" i_length="682">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="73832" g_stop="73767" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="731" r_stop="796" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="73766" i_stop="73683" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="73682" g_stop="73611" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="797" r_stop="868" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="73610" i_stop="73516" i_length="95">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="73515" g_stop="73294" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="869" r_stop="1090" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="73293" i_stop="72444" i_length="850">
            <donor d_prob="0.601" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="72443" g_stop="72066" g_length="378"/>
          <reference_exon_boundary r_type="cDNA" r_start="1091" r_stop="1467" r_length="377" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0073P13.2" gen_strand="-" ref_id="SGN-U564240" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1468</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0073P13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U564240" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77292" e_stop="77265"/>
          <exon e_start="77166" e_stop="76921"/>
          <exon e_start="76350" e_stop="76205"/>
          <exon e_start="75609" e_stop="75492"/>
          <exon e_start="74706" e_stop="74515"/>
          <exon e_start="73832" e_stop="73767"/>
          <exon e_start="73682" e_stop="73611"/>
          <exon e_start="73515" e_stop="73294"/>
          <exon e_start="72443" e_stop="72066"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTGAGCCAGCTGATGGATTAGCTCCAGTAAGACTTTGTTCACTTGCCTTTCCTTTTATCTTTGTTCCTCCTGATCCTGTATGCAGAGGCAGATAATGTTGTGCACCGATGTGTGTGATTTCTAGGTTTGGAACAATGATGTCCGGTTTTACCGTGTGAATGATTCCTCTGGAAGTCCTATTGCCTACTTCTATTTTGATCCATACTCTCGTCCATCTGAGAAACGTGGCGGTGCTTGGATGGATGAAGTTGTTAGCCGAAGCCGTGTATTATCACGAGATGGTTCGAATGCTAGATTGCCTGTTGCACACATGGTTTGTAATCAGATGCCACCAGTTGGGGATAAACCCAGCCTAATGACATTCCGTGAGGTAAGCATGTGGTTTGACTCTAAGTGCCTTTGATAAGCTATTGTGCTGCATGGTATATCATCAGCTTTGGCTAATCTACTACTTGTTAGGCTTTGCATCAGAGTGGGTTGTAAAATAATTTTCTTTTGGGTGGATATGGGTGGTGTGGGAGGGACATGAGCAAATGTTTAAGCCGATATTTTTACTAATTTTAGGTTTAGGAATATTTCTAAGGTAATGTAAATGATTATGTCAATGTTGGGTATTACTGTATAAACACAGTATCTTCTATTCCTCCCTTTCCTTGTTATCTGTGGGGAAATATCTGATGGCTGGGCTTTCTATTTTTTTCTTTTATACAAAAACCCTGGGTCACAGCGCTTCTTCTCTCGAATCCTTTTGTTCAAGGTCTCGACAAAATTTTTATGTACTCTTTTCTTCATTAGCTTGTTTCTGAGATATATGATGCTTCCAATCATCTGCGGGGTTGTATCTATAGTTCATGAAAAGTTAACATTTACTTCTACACAAGTAAAATTACCATCACTCCGTCAGGCATGTTTTTGGTATTGAATACGTTATGCTTTTTAGGTTGAGACTGTCTTCCATGAATTTGGACATGCCCTTCAGCATATGCTAACTAAGCAGGATGAGGGTTTGGTTGCTGGCATAAGGGGTGTAGAGTGGGATGCTGTGGAATTGCCATCACAATTCATGGAGAATTGGTGCTATCACAGGTATGGTGATGTCCTTGTAATATTACTTGATCCGTTTAGTTCTGGTTGAAAAAACAAGTAACTCCACTTATGTTTCTAAAACAAAAAAGGTGGACAAAATGCACTTTGAAATAGCTATTTTCAGAGGCCCCTGCCTGTAGGCGTGCCTAGGTCATTTTCAAGCTTAAGAAAAGAAAGGAACAAATTGATGAACTCTTAAAACATTATCAGAAGGATTCTTCTTAAACCAAACCAAAAAAAAACACCACCATTTAATCAACTCTTGTTTCATATGCTTTTTATGCTGCCTGGTCGCTTCTATGATGTCTCCATGCCAACATTCTCTCTGAATAAGTTACTTTCAATGCAATTAATTTTTATTGTAGTGAGTTTTTATATGTTTGATTTTGTTTAGTTTCTCATAAATTGTATGCTCCACTTCAAAGGAGCCTGTGTTTCACTTTTCGCTTCAAGTCACGCAGACGTTGTCGGTTTTTGCGCTTTTCACTTTCAAAAATACTGCAGTAGAAGAGATATGGTTGAAGAAATCCATGTTTCGTTTCTTTTGAATCAGTTAGCTGTTGATTAGTCATTTTATTGATGAGCTGCTCTGCAGGGATACTCTGATGGGTATTGCTAAGCATCATGAAACTGGAGAGACACTCCCAGAAGACATATACAAGAAGCTTCTTGCTGCTAAAACTTTCCGTGCTGGTACCTTAAGTCTTCGGCAGGTGAGAACTTCCCCATTTTTCTCTTTTCTGGTCCTCTCTTAATAACCGTTTGACTGATTTTCCTTTCAACCAGTATTCTATTAGCCAACAATATATATTCCAAAATTTTCATGCCCTATTTCTTTATATAAAATAATTCATGTCTATGATCGAAGTCCGTAATTTTCCTTCAAACTCTTGGTGGGAGACATCAAGTCTCTTCATAACATTCAGGTTTGAGACCTTCATGGGCCACCAAAAAAAAAGTCTCTCCATAACATGCATTTAACATATACTATTTTCCTGGTTCATTTCTAATATTCTTTTAATGTAACTGAAGTTGATATACACGTGTTTCCCTTTCTTTATTGACTTTTAAATTGGAAGGGGGAGAGAAATAAGTTTTGAATGCACACTTTCTAAATCAGGTCTTCAGGAATAGCGACATTTTGCTGGATGTAGGGTTTTCAAGTCTAGTTAGTTAATCAAGTGGTGTCAATATTAAGTGCTCCACAAGTATGTAAAACGGTAGTAGGAACTAAAGGGATGTTCTCTGTTGTTTCGATTCATGCACCAGTGCCTGCATCTACCTGAATTGTCTTTGTTGGTTAGTTTCCTTAGCGTTCTTTGATTATGTTTCTAGAACTCTAAATTGTTCCCAGTGAGTGATGTATTCTGTAGATCTTTTCTTCTCTTTATTATGGTGTAGGTATTTTATTTAAAATTGTCATCATAAATGATGTTCGATGTCATGACTTCGTGATTCTGTTGAAATGCTTACCAGTGGCCATAAACTTTCTTTGTAGTTGAGATTTGCTACAGTTGATCTTGAGTTACATGCAAAATATGTTCCGGGTGGTTCGGAATCAATCTATTGTGTTGACCGACGGGTCTCTAAGAAAACCCAAGTGCTTCCTCCACTCCCAGACGATAAGTTCCTTGCCAGTTTCAGTCACATTTTTGCTGGTGGATATGCTGCTGGATACTACAGTTACAAGGTGCTTCTGCCCCCTTTTTGTGGTTCTTAGCTCCTTATATATTTCTAGTTAGTTGTATTTCCTGTGAGAGAGTTGTGTATAAATATTGTGGGGTTAAAGTGGAGAAGTTATATCTTTTTAGATCCATCGTGCCTCTGAAATTTAGTTTTCTCTTCCTCAATATAAGAATGTACGATTCTTTACTGCTTAATCTTAAAATTCTTCTGGCGTATTGATAGCACGTGCTTATATTGACCAAACTGTTAGGCTAGTACTGGAACTGTTGCTTGTATCCTAAGTTGATTGGACTCTCCAAAAATGTTCGGATCCTCCAAAATTGCACTACTTTTGAAGGATCCACCGCGCACCTGATGGCATTTTTGAAGAGTCCGAGCAACGTAACTTATATCTGCCTTTTGCTCAGCAACATAATATTTTTCTTATATTGACATGGTAATGGTAATAGGTTTTTGACGGATGTTCTATTATGATCTATTCCTGTTAATTACATTCTTTATATAGTATTTCTGTCTTTAAGAAATAACTTATTGGATTTAGATGTTCTACTATTTAGACTGTTGAAATATCTCCTTTCTTTCAAGTGGTTTTTATATCTTCTTCTATATAAAAATAAATAAATTGGGGTAGCCTTGTTCTAGATCAAGACATGCTTTAACCAACAAAGTATTTCCAATTTGTGCAGTGGGCAGAGGTTTTGTCTGCAGATGCTTTCTCTGCTTTTGAAGATGTTGGACTAGAGAATGAGAAGGTATAGTTTAGAACTTTTGCTTCCATAATCTTTAGTCATATTTTTCACCATTCAACTTATAGTAGTGGCTTTAAATTTGAGTAGGCTGTAAAAGAAACAGGCCAGAGATTCAGGGAGACTGTTCTTGCTCTTGGCGGTGGAAAGGCTCCACTGGAGGTAGGGGGATTATAACAATGCTAGTGTCTTGTTATGTTTTGCTCATTTTTTAATTCTGCTTAGTCTTCTGATGCATTCATTATCTTCATATTCAGGTTTTCGTGCAATTTAGAGGACGGGAACCTTCTCCAGAACCGCTGCTTAGGCATAATGGCCTACTTACCTCTTCTGCATGAAGATTGTTGTAGAACCATTAGAGACAATTGCAACTGTATTTGTTTTCAAGTTATTATAAAGAATTCACTTTAGAACAAAGCATTGCTACTGATTTCTCGTCTCCCTTTATGCCATTTTGAGATCATCATATGCCATATATAGTAAGTGCACCGTTCTTTTTGGATGTTCTCTTCCAGGAAAATTTTGCTATATTGTTTCATTGTGGTTTCCCGCATTATTGTTTTAGTTTATATATTTGTAAATGATATGTCCTCAATCACAAATGGCTCACATATCACATATATCCTGTCATTTTTTTTATTTATTTTTTTAGTTTATGGATATTTTTAATACATAATTCTTTTTTTTTTCTTTTTTGAGTCACGGACTAATTTGAGTTTTAAATGTCTTTATGATTCAATTGTTTATCGTAATTATTTATAAGAAATATGAAGATATGTGATTTATCAATGATACATTAAGGTATTGTAATATGGGTAGGAACAGAATTTTTGATAATTTCATAAGTTGGATTCGATGTACGGTCCTAGAATCCGTGCAATGCTTAAGCAAATCGTATGTTTGGTTTTCTCTTATGAATTGGAGGCATTGATAGATTGGAGTCTCCGTCAAATATAATTTCTTTTATTCCGCTATTCAGAAGTTGAGGTTCCAAATCGCTCTTGTGTATTGTCTCTCTGGCTCCAGCAGAGGAAGAGTTTTAACCCCCTGATAAAAAGAAGAAGTGTTTGCTTGGATAGCTGATGATCTCTAACTTAACCTGCCATCTGATATATGTTGTGGCCGTTTTTCCATTGTCTCTGGTTACATTTTGACGGATTTTTGCTTTGTTTTGGGTGGCTGTTTTTATTCATTCGAATAGCTAGATGGTTATTTTGGAACTGAAAGTAAATGACAACTTTCCTGTTCAGTTCTTACAGCTTTTATCCTCATAGACCACTACTGTGCAGCTGAAACTGTATTGAGTTTGACCTTATCTTCATTTTGCAGGATTTAGCAAGGAAACAAGTTCATTTGAAAAATCAGTAACAGATACGAAGGAAATTGAGGGATTGCCTGCCACCTCTCTTGGTTTGACTTCACATTGAAGCTCTCTTTGTGGGTGTTCGACAACTAAATTAACATTGATTTCTCTTTTGTGTTCTCTTTGCTGCCTGTAACTGATAACAGGGGCACAAAAATGCTACTGCAGAAGTCGGGCCATGGATGATTACATTTTGGATTTATACAGATTCACAAATACCGACTTCTGTTGGCTTTACTATTTCTGCAAAAACCACGGTAAAAAACTATGAATCCTACCACTTATGTCTCAGAGCAGGAGTTTATCTTGTTTTGAGAGCGGCCGGCGTCAAATCAGAAGGAAAA</genome_strand>
        <mrna_strand>GGTTGAGCCAGCTGATGGATTAGCTCCA..................................................................................................GTTTGGAACAATGATGTCCGGTTTTACCGTGTGAATGATTCCTCTGGAAGTCCTATTGCCTACTTCTATTTTGATCCATACTCTCGTCCATCTGAGAAACGTGGCGGTGCTTGGATGGATGAAGTTGTTAGCCGAAGCCGTGTATTATCACGAGATGGTTCGAATGCTAGATTGCCTGTTGCACACATGGTTTGTAATCAGATGCCACCAGTTGGGGATAAACCCAGCCTAATGACATTCCGTGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGACTGTCTTCCATGAATTTGGACATGCCCTTCAGCATATGCTAACTAAGCAGGATGAGGGTTTGGTTGCTGGCATAAGGGGTGTAGAGTGGGATGCTGTGGAATTGCCATCACAATTCATGGAGAATTGGTGCTATCACAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATACTCTGATGGGTATTGCTAAGCATCATGAAACTGGAGAGACACTCCCAGAAGACATATACAAGAAGCTTCTTGCTGCTAAAACTTTCCGTGCTGGTACCTTAAGTCTTCGGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGATTTGCTACAGTTGATCTTGAGTTACATGCAAAATATGTTCCGGGTGGTTCGGAATCAATCTATTGTGTTGACCGACGGGTCTCTAAGAAAACCCAAGTGCTTCCTCCACTCCCAGACGATAAGTTCCTTGCCAGTTTCAGTCACATTTTTGCTGGTGGATATGCTGCTGGATACTACAGTTACAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCAGAGGTTTTGTCTGCAGATGCTTTCTCTGCTTTTGAAGATGTTGGACTAGAGAATGAGAAG....................................................................................GCTGTAAAAGAAACAGGCCAGAGATTCAGGGAGACTGTTCTTGCTCTTGGCGGTGGAAAGGCTCCACTGGAG...............................................................................................GTTTTCGTGCAATTTAGAGGACGGGAACCTTCTCCAGAACCGCTGCTTAGGCATAATGGCCTACTTACCTCTTCTGCATGAAGATTGTTGTAGAACCATTAGAGACAATTGCAACTGTATTTGTTTTCAAGTTATTATAAAGAATTCACTTTAGAACAAAGCATTGCTACTGATTTCTCGTCTCCCTTTATGCCATTTTGAGATCATCATATGCCATATATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTAGCAAGGAAACAAGTTCATTTGAAAAATCAGTAACAGATACGAAGGAAATTGAGGGATTGCCTGCCACCTCTCTTGGTTTGACTTCACATTGAAGCTCTCTTTGTGGGTGTTCGACAACTAAATTAACATTGATTTCTCTTTTGTGTTCTCTTTGCTGCCTGTAACTGATAACAGGGGCACAAAAATGCTACTGCAGAAGTCGGGCCATGGATGATTACATTTTGGATTTATACAGATTCACAAATACCGACTTCTGTTGGCTTTACTATTTCTGCAAAAA-CACGGTAAAAAACTATGAATCCTACCACTTATGTCTCAGAGCAGGAGTTTATCTTGTTTTGAGAGCGGGCGGCGTCAAATCAGAAGGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U565226" ref_strand="+" ref_description="SGN-U565226 Tomato 200607#2 [11 ESTs aligned] (*GB) gi|18424970|ref|NP_569013.1| (e_value=8e-152) oligopeptidase A [Arabidopsis thaliana]; (*ATH) AT5G65620.1 (e_value=5e-154)  Symbol: None | peptidase M3 family protein / thimet oligopeptidase family protein, similar to SP:P27237 Oligopeptidase A (EC 3.4.24.70) {Salmonella typhimurium}; contains Pfam profile PF01432: Peptidase family M3 | chr5:26239174-26243549 FORWARD | A... ; (*SWP) sp|P44573|OPDA_HAEIN (e_value=9e-56) Oligopeptidase A OS=Haemophilus influenzae GN=prlC; ">
      <seq>gactcgtttttcgctatctcgttcagctcgcctttgcttaagacccacttctactttttcacgtttatctaccaaaaacctacttcagtgtccgtcttgtcccctctggtcatcctctttctctctctgtcttcacactttccgcaagtcaacttctcccggtaaatccatcaccgtccgatcattttctccatcgtcggcatccatttccgaccatccttctaaaatgtcgatggcttctgatgacaatcctttgttgaaggactttgatttcccaccattcgatgtaatcgaagccaagcacgtccgtcctggaattcgtgccttgcttaacaaaatagaggaggaattgagcgctttggagaagagtgtggagcctacctggcccaagctggcggagccattggagaagatcattgatagattgacggttgtttggggtgcggtgaatcatctcaagtccgtcaaagataatcctgaacttcgttccgctcttgaagaagttcagccagaaaaagttgcttttcagcttaaattgggtcagagtaagccaatctataatgcattcaaagccatccgagagtcacctgagtgggactctttgagtgatgctcgtaaacgaatagttgaatcgcaaataaaggaggctgtacttagtggtatcgctcttgaggatgatcaaagagagcaatttaacaagattgaacaggatttagcaaagctatctcagaaatttgatgaaaatgttttagattccaccaagaagtttgaaaaattaataatagataagaaggatattgacggattacctgccacatctcttggtttggctgcacagacagcagtgtctaaggggcacgaaaatgctactgcagaagacgggccatggatcatcacattggatgcgccaagttatatgtctgtgattcaacatgcaaagaatagaactcttagagaagaggtgtaccgtgcttgtataaatcgtgcttctagtggagaccttgataacactgagataattaaccaaattctaaagcttagattggaaaaggctaagctccttggatacaataactatgctgaggtaagcatggcgatgaaaatggccactgttgaaaaagccgaagagcttttagaaaagcttcgtagtgcttcttgggatcctgcagttaaagatttggaagacttgaaagatttctgtaaaagtcaggttctcccgaagctgatgatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0073P13.2" temp_strand="-" temp_description="C02HBa0073P13.2  AC215377.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0073P13 sequenced_by:kribb upload_account_name:korea">
        <position start="81721" stop="77779"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81421" g_stop="81082" g_length="340"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="340" r_length="340" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81081" i_stop="81011" i_length="71">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81010" g_stop="80843" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="508" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80842" i_stop="80290" i_length="553">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.866" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80289" g_stop="80166" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="509" r_stop="632" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80165" i_stop="79699" i_length="467">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79698" g_stop="79622" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="633" r_stop="709" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="79621" i_stop="79162" i_length="460">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="79161" g_stop="79018" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="710" r_stop="853" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="79017" i_stop="78919" i_length="99">
            <donor d_prob="0.591" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="78918" g_stop="78688" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="854" r_stop="1084" r_length="231" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="78687" i_stop="78600" i_length="88">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="78599" g_stop="78509" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1085" r_stop="1175" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="78508" i_stop="78136" i_length="373">
            <donor d_prob="0.694" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="78135" g_stop="78079" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1176" r_stop="1231" r_length="56" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0073P13.2" gen_strand="-" ref_id="SGN-U565226" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1232</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0073P13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U565226" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81421" e_stop="81082"/>
          <exon e_start="81010" e_stop="80843"/>
          <exon e_start="80289" e_stop="80166"/>
          <exon e_start="79698" e_stop="79622"/>
          <exon e_start="79161" e_stop="79018"/>
          <exon e_start="78918" e_stop="78688"/>
          <exon e_start="78599" e_stop="78509"/>
          <exon e_start="78135" e_stop="78079"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTCGTTTTTCGCTATCTCGTTCAGCTCGCCTTTGCTTAAGACCCACTTCTACTTTTTCACGTTTATCTACCAAAAACCTACTTCAGTGTCCGTCTTGTCCCCTCTGGTCATCCTCTTTCTCTCTCTGTCTTCACACTTTCCGCAAGTCAACTTCTCCCGGTAAATCCATCACCGTCCGATCATTTTCTCCATCGTCGGCATCCATTTCCGACCATCCTTCTAAAATGTCGATGGCTTCTGATGACAATCCTTTGTTGAAGGACTTTGATTTCCCACCATTCGATGTAATCGAAGCCAAGCACGTCCGTCCTGGAATTCGTGCCTTGCTTAACAAAATAGTATGTTTCGATTTCTCTTATATACTTAGGGTTTAATAGTGTGGCGCGTTAATTTTGTGATTTGAACGTAGGAGGAGGAATTGAGCGCTTTGGAGAAGAGTGTGGAGCCTACCTGGCCCAAGCTGGCGGAGCCATTGGAGAAGATCATTGATAGATTGACGGTTGTTTGGGGTGCGGTGAATCATCTCAAGTCCGTCAAAGATAATCCTGAACTTCGTTCCGCTCTTGAAGAAGTTCAGGTTTGTAATCTTGGGGCTTTTGGCATCACAATTATAATTTTCTACTAAAATAATATCATCTTGAACCCTTTTTTGAAGATTCTTTGCTTGAAGCCATACCAATTTATTTTTTCCGTGTCTGTGATTTCTTAATCTCCCAGAGTGTAAAGATCTCGTCTCTTTCGTTCAATCAATACAACGTGGTTCTTTTCCTTTCCCATGTTCTTGATTTTCTCCCGACAATTTGTTTTGAGTTCTTTTTTACATTGACTCATGGCCACAACAATTACGAGGGAGTAATTTAGTAGTCTCCTCTCTATAGATTCAAATTTTAATTTGTATTATAGCTTTTGCGTTGTTAAAAAGGATATTAATCAGAGTTGTTTGCTGGATAGATAATGATATCTTCTGTTTGACTACAAACCTTTTTCAATCTGATATACATCCTTTTATACACTTTCTAATTTGAGGCTTGATATGTGTCTTACTACAAGATTCCCATGCTCTTTTCTCTTTATCCTCGGATACGCTACTACTTTCATTGCATCATTGATACTATTTACTTCTCGTGCAGCCAGAAAAAGTTGCTTTTCAGCTTAAATTGGGTCAGAGTAAGCCAATCTATAATGCATTCAAAGCCATCCGAGAGTCACCTGAGTGGGACTCTTTGAGTGATGCTCGTAAACGAATAGTTGAATGTAAGTTCATGAAACTTATTTTTCCTTTTATCTTTTCGAATTCGGGAGGCACGGTGTCTTTAAGCATGAAAATCTATTTAATTCCTGTTGCGGTCTGTCCAGGACTGTAGTTTGAGATTTACTTTTCCTAATGCATCAACTTCTCTCTGCCAATTTGTTTTTGGTATTTTTTTTTGTGCAGAATCGTTATCGTTTATCCAATAAAGCTAAGAACTGTATATTATAAAATTGTATGTACAGTAATTTCTTTGCAACTTGCATGAAGTGCTTGATGGTCACATGATTCCGTTAAAAATTCAACTGTTGTTTCCCAACCCACCCTCACGATAAAAATAGAAACAGAAAGAAAGAACAAGAGAAATCAAAGAAGACCACATATTTTTAATGGTTAACTTTCATTTGAGGTCTTTCCAGCGCATTGCCTGCAAATAAATGGTCATCTCACACTCTGCTTCTTGCTCGTGCAGCGCAAATAAAGGAGGCTGTACTTAGTGGTATCGCTCTTGAGGATGATCAAAGAGAGCAATTTAACAAGATTGAACAGGTGTGCTCTGGTTTCTTGTTGAACACATAGTCTTCTCATTGTTCTATACCCCCCAAATGTTTCTTCTTAAATGCACTCTTAACAAGTGAAAAATTTAACGGACTGGTATTATAGCAATATATCTATAATACCAGTTATTTTATATGTATGTTTGAAGTTATTTTACTTGTACACCTATCTGATTTATGTTGTGGCTGTTTTTCCATTTTCTCTGAAAATATTTTGACGGATTTTTACTTTGTTTTGGGTGGTTGGTGTCTTTTTATGAGTGTTTTTTTATTCGAATTGCGAGATGATTATGTTGGAACTAAAAGTAACTGAGAATATTCCTGTTCAATATTTATGGATTTTAACCTCAGAGTAATATTTTAACTTATTGCAAACAGTCAGACAATTACTGCACGGTTGAAATTGTATTTTAAGTCACTATGTTGCATTTGACCTTATCTTCATTTTGCAGGATTTAGCAAAGCTATCTCAGAAATTTGATGAAAATGTTTTAGATTCCACCAAGAAGTTTGAAAAATTAATAATAGATAAGAAGGATATTGACGGATTACCTGCCACATCTCTTGGTTTGGCTGCACAGACAGCAGTGTCTAAGGTAACGCGGAAGCTCGCTTTGTGGATGTTTGAAAACTGAATTGATTTTGGTGACCTTGTCTCTTATGGATTCTCCTTTGTTGCCTGTGTCAAAAAACAGGGGCACGAAAATGCTACTGCAGAAGACGGGCCATGGATCATCACATTGGATGCGCCAAGTTATATGTCTGTGATTCAACATGCAAAGAATAGAACTCTTAGAGAAGAGGTGTACCGTGCTTGTATAAATCGTGCTTCTAGTGGAGACCTTGATAACACTGAGATAATTAACCAAATTCTAAAGCTTAGATTGGAAAAGGCTAAGCTCCTTGGATACAATAACTATGCTGAGGTATACATTTTTTAAAAAACTCACAATACCATCTATGTTGGTTAAATGTATTTTTTCTTTTTGAAAATTAAATGGTTTACTGATATAGGTAAGCATGGCGATGAAAATGGCCACTGTTGAAAAAGCCGAAGAGCTTTTAGAAAAGCTTCGTAGTGCTTCTTGGGATCCTGCAGTTAAAGGTAGGGCGTAAAAAAGCATCTCAATGGTATTTGAGATGTAAACTATACAGAGTCTTTGTTATGAGCTTTTATGTTTTTGATTTACTTTTTGCTTCATCAATTCCGAGTTCCCTTTTTAGTTTTTATTTACCAGATATGAGGTAAAATAGGCAAATTCTGATAGATGGATCAATCTTTAAAAAAGGTTGTCTTTTCTTTTTGTTTATTTATTTTGAAAATAAGATGATACTACTAACCACCTTAATTTTTGTGCTTTTCATATGGATTGCTTCTCTTTTTTTCTCTTCTCCCCTTGATGCAACCAAAATAACTGGTTGACCTCTCTTAGCTGACAATGTTTTGTGTTTACAAGCTTTTCCCTTGATCTATGTAGATTTGGAAGACTTGAAAGATTTCTGTAAAAGTCAAGGTTCTCCAGAAGCTGATGATC</genome_strand>
        <mrna_strand>GACTCGTTTTTCGCTATCTCGTTCAGCTCGCCTTTGCTTAAGACCCACTTCTACTTTTTCACGTTTATCTACCAAAAACCTACTTCAGTGTCCGTCTTGTCCCCTCTGGTCATCCTCTTTCTCTCTCTGTCTTCACACTTTCCGCAAGTCAACTTCTCCCGGTAAATCCATCACCGTCCGATCATTTTCTCCATCGTCGGCATCCATTTCCGACCATCCTTCTAAAATGTCGATGGCTTCTGATGACAATCCTTTGTTGAAGGACTTTGATTTCCCACCATTCGATGTAATCGAAGCCAAGCACGTCCGTCCTGGAATTCGTGCCTTGCTTAACAAAATA.......................................................................GAGGAGGAATTGAGCGCTTTGGAGAAGAGTGTGGAGCCTACCTGGCCCAAGCTGGCGGAGCCATTGGAGAAGATCATTGATAGATTGACGGTTGTTTGGGGTGCGGTGAATCATCTCAAGTCCGTCAAAGATAATCCTGAACTTCGTTCCGCTCTTGAAGAAGTTCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGAAAAAGTTGCTTTTCAGCTTAAATTGGGTCAGAGTAAGCCAATCTATAATGCATTCAAAGCCATCCGAGAGTCACCTGAGTGGGACTCTTTGAGTGATGCTCGTAAACGAATAGTTGAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAATAAAGGAGGCTGTACTTAGTGGTATCGCTCTTGAGGATGATCAAAGAGAGCAATTTAACAAGATTGAACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTAGCAAAGCTATCTCAGAAATTTGATGAAAATGTTTTAGATTCCACCAAGAAGTTTGAAAAATTAATAATAGATAAGAAGGATATTGACGGATTACCTGCCACATCTCTTGGTTTGGCTGCACAGACAGCAGTGTCTAAG...................................................................................................GGGCACGAAAATGCTACTGCAGAAGACGGGCCATGGATCATCACATTGGATGCGCCAAGTTATATGTCTGTGATTCAACATGCAAAGAATAGAACTCTTAGAGAAGAGGTGTACCGTGCTTGTATAAATCGTGCTTCTAGTGGAGACCTTGATAACACTGAGATAATTAACCAAATTCTAAAGCTTAGATTGGAAAAGGCTAAGCTCCTTGGATACAATAACTATGCTGAG........................................................................................GTAAGCATGGCGATGAAAATGGCCACTGTTGAAAAAGCCGAAGAGCTTTTAGAAAAGCTTCGTAGTGCTTCTTGGGATCCTGCAGTTAAAG.....................................................................................................................................................................................................................................................................................................................................................................................ATTTGGAAGACTTGAAAGATTTCTGTAAAAGTC-AGGTTCTCCCGAAGCTGATGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600503" ref_strand="+" ref_description="SGN-U600503 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|4512618|gb|AAD21687.1| (e_value=1e-14) Strong similarity to; (*ATH) ATMG00810.1 (e_value=2e-13) | Symbol: ORF240B | hypothetical protein | chrM:227709-228431 REVERSE | Aliases: ORF240B; (*SWP) sp|P92519|M810_ARATH (e_value=2e-12) Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810; ">
      <seq>accaacaccgtcttcgtctacgaatggagccgacaccccctttgccgatataacccacttccgcancctcattgggactctatantatctagccattactcgtcctgacatccagtttgctgtcaaccgagttgctcancgcatgcatcanccnagtgaacatgattaccattgtctaaaacgcattctcaggtacatttttggcactcttggtcgtggtttactcattcnacccggggacttgnagcttcggggtttctcanattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0073P13.2" temp_strand="-" temp_description="C02HBa0073P13.2  AC215377.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0073P13 sequenced_by:kribb upload_account_name:korea">
        <position start="84108" stop="83252"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83808" g_stop="83552" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="267" r_length="257" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0073P13.2" gen_strand="-" ref_id="SGN-U600503" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>257</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0073P13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U600503" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83808" e_stop="83552"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCGTCTACGAATGGAGCCGACACCCCCTTTGCCGATATCACCCACTTCCGCAGTCTCATTGGGGCTCTACAGTATCTGGTCATTACCCGTCCTGACATCCAGTTTGCTGTCAACTGAGTTGCTCAGCGCATGCATCAACCAAGTGAACATAATTACCATTGTCTAAAACGCATTCTCAGGTACATTTTTTGCACTCTTGGTCGTGGTTTACTCATTTGACCCGGGGACTTGGAGCTTCGGGGGTTCTCAGATTC</genome_strand>
        <mrna_strand>TCTTCGTCTACGAATGGAGCCGACACCCCCTTTGCCGATATAACCCACTTCCGCANCCTCATTGGGACTCTATANTATCTAGCCATTACTCGTCCTGACATCCAGTTTGCTGTCAACCGAGTTGCTCANCGCATGCATCANCCNAGTGAACATGATTACCATTGTCTAAAACGCATTCTCAGGTACATTTTTGGCACTCTTGGTCGTGGTTTACTCATTCNACCCGGGGACTTGNAGCTTCGGGGTTTCTCANATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U598313" ref_strand="+" ref_description="SGN-U598313 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|62944413|gb|AAY22055.1| (e_value=0) symbiosis; (*ATH) AT2G29000.1 (e_value=2e-88) | Symbol: None | leucine-rich repeat family protein / protein kinase family protein, contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain | chr2:12467858-12472114 FORWARD | Aliases: T9I4.8, T9I4_8; (*SWP) sp|Q8L4H4|NORK_MEDTR (e_value=0) Nodulation receptor kinase OS=Medicago truncatula GN=NORK; ">
      <seq>tttagtttagtttttacctagtaatgcttcaaaaattgaaaccattggaagtcataagtcccagtttgctggtatctgcaaaacctatcttgttccctcctacctattttcgctttttaatcagtttttcattttaaaattacagaaaatcatgagttggaaattggattttgtagataaccaaagtttaatgagataggcatagtcaggttttgagttgggatgacctgatagggcaattttcttccatgagaataggctgatggaagtagataattgctggaacataaggttggtcaactgtgttatcatctgcctggtgatatatatacaatctgcctttgcacaagaaggatttctaagtattcagtgctgtgctactgcaaactttacggaaccacgtaccaacttaagttggatttcagatggaatttggttccctgaaaatcagagttgcatatcaaggccagtgtacaagagtgaacactatgaacgagctcgatcttttagctcagacattagtcataagtggtgttacagcttgccaaccaggaaagagcatgactatctagtaagaggtacatttctttctgtcaaacaagagaagactctcccacatagttcttttgttgttttgattggtgtcacaccaatagccacagtgaagtcatctgatgaacttaaggttgagggaatttttagagctactagaagctatacaaacttctgcctattgaaaaagaaggggaatccttacatttctaaggttgaactcagaccgataaattcagattatctcaaaaaggagccttcagaaatactcaaacttgtacatagagtagatgctggaaataaggctgcggaaatcaggtacccatatgaccagtacgatagaatttggagaccagcctcaaatctagaatcacaagttactcaaacgccgccatccattattaagcatgtctttgcaagaaaacatagtttattacctcctgcattcgtattacgaacagccctcacccatccagagagattggacttcttgcatgaagaccttgacacaggatattatacttactctctcttcctgtactttctagagcccaatgactcagttcaagctggagaaagggtgttctatatatacattaacaacgaaaagagacttaaggttgatatactggctagtggttccagatacctggatgtagttctgaatttcagagcaaataggtctgtcaacctgacaatgatcaaggcctcaaatctatctcaattgggacccatttgtaatggttatgagattttaaaggctcttcctcgtgttaaagaaacagccactgaagaagttgacataatggcgaatgtcaagaaggaattattgcaacaaaacaaaaacaatgaaatatggaagagttggtcaggagacccttgtcttccccttccctggccgggcctaacttgtgatcgagttaatggtacttcagtcatcactcagatagatctctcctcaggtggccttagtggacctagccctcctagcatccaaaaactgatgcacctgagaaaactgaatatcagcattaatggctctagtggcacaaattcactctttacatcatacttcacatactctacaagatacttaagcagcaggattcatattagcaacaagctttctagaagcataaaagaatctaatattacaacagacaaagggatggctaatgttaaacaaaactcaagttcaacacataaacttgtgattggagcagctgtaggtacagccctcctggtgatccttgcaattgttatctctgtggtctgcctcttcaaaagacgagtaatggcaggaccaaaatttcttatgagaaattactcgatcacaaggaatgcagtatactcagtaccaagcatggatactaccatgatgaagtcaatatcctccaggaacttcaaattggaatatatagaagctattactcagaactacaaaactttgataggtgaaggtggctttggatccgtttaccgtggtaccttacctgatggtgtagaagtggctgtaaaggtcaggtcagccacttcgactcagggaattcgagaattcaataacgagcttaaccttctgtcagctatcacacatgagaacctggtccctcttattggctactgctgcgagaatgaacagcagattctggtttatccatttatgtcaaacagctccctacaggataggttatatggaggagcagcaaaaaggaagattctagactggccggccagactttccattgcgttaggagcagcgagaggtttgctgtaccttcacacattctcggagcgttgtctgatccatagggacgtcaagtcaagcaacatactcttggatcagagcatgtgtgccaaggttgctgattttggattttcaaaatatgcatctcaagaaggggatagtggtacttctttagaagtaagggggacagctgggtacttggatccagagtactactcgacccaacgtctgtcagcaaaaagtgatgtcttcagctttggagttgtcctactggaaatcctcacaggtcgagagcctctcaatattaacaagccaagaaatgagtggagcttggttgaatgggcgaaacctctaataagaagctcaagagttgaagaaattgtggatcccactatcaagggagggtatcatggtgaggcgctgtggagagtggtagaggtggctttggcatgcacagagacatactcgacttacagaccatgcatggcggacattgtaagagagctcgaggatgcattgataatagaaaataatgcatcagaatacttgaagtccctagacagctttggaggatcaaaccgtttctccgtagaaaggtccattgtccttccacctattaaatctcaaacagaaccatccagtctcctctcaaaaccagcccctccacaaccaaggtaaatgctgtagaggaatggatttaaactgattgcaatagataacagaattcttagaaaagtgtttggaatttttgcaaattactcctcaaattccttttaagttaaatctcgttaaactgttcattcagtagagcagattttgttatacataccagagaacaggaaacagtgttgtcaaaggtgtgcttaagccccaaagtgaggcatactttccttgcgattgagatcttgaagactgatatttcactttatcgtaaaaaaaattcaatttctttgtcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0073P13.2" temp_strand="-" temp_description="C02HBa0073P13.2  AC215377.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0073P13 sequenced_by:kribb upload_account_name:korea">
        <position start="94197" stop="87461"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93897" g_stop="93545" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="353" r_length="353" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93544" i_stop="93052" i_length="493">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93051" g_stop="92535" g_length="517"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="870" r_length="517" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92534" i_stop="92411" i_length="124">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92410" g_stop="91932" g_length="479"/>
          <reference_exon_boundary r_type="cDNA" r_start="871" r_stop="1349" r_length="479" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91931" i_stop="91831" i_length="101">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="91830" g_stop="91680" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1350" r_stop="1500" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="91679" i_stop="91520" i_length="160">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.282" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="91519" g_stop="91448" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="1501" r_stop="1572" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="91447" i_stop="91346" i_length="102">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.235" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="91345" g_stop="91277" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1573" r_stop="1641" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="91276" i_stop="91079" i_length="198">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="91078" g_stop="91007" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="1642" r_stop="1713" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="91006" i_stop="90846" i_length="161">
            <donor d_prob="0.151" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="90845" g_stop="90667" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="1714" r_stop="1892" r_length="179" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="90666" i_stop="90374" i_length="293">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.830" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="90373" g_stop="90147" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="1893" r_stop="2119" r_length="227" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="90146" i_stop="89790" i_length="357">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="89789" g_stop="89663" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="2120" r_stop="2246" r_length="127" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="89662" i_stop="89577" i_length="86">
            <donor d_prob="0.406" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="89576" g_stop="89508" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="2247" r_stop="2315" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="89507" i_stop="89267" i_length="241">
            <donor d_prob="0.840" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="89266" g_stop="89077" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="2316" r_stop="2505" r_length="190" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="89076" i_stop="88820" i_length="257">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.722" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="88819" g_stop="88687" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="2506" r_stop="2638" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="88686" i_stop="88375" i_length="312">
            <donor d_prob="0.864" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="88374" g_stop="87761" g_length="614"/>
          <reference_exon_boundary r_type="cDNA" r_start="2639" r_stop="3252" r_length="614" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0073P13.2" gen_strand="-" ref_id="SGN-U598313" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>3252</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0073P13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U598313" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93897" e_stop="93545"/>
          <exon e_start="93051" e_stop="92535"/>
          <exon e_start="92410" e_stop="91932"/>
          <exon e_start="91830" e_stop="91680"/>
          <exon e_start="91519" e_stop="91448"/>
          <exon e_start="91345" e_stop="91277"/>
          <exon e_start="91078" e_stop="91007"/>
          <exon e_start="90845" e_stop="90667"/>
          <exon e_start="90373" e_stop="90147"/>
          <exon e_start="89789" e_stop="89663"/>
          <exon e_start="89576" e_stop="89508"/>
          <exon e_start="89266" e_stop="89077"/>
          <exon e_start="88819" e_stop="88687"/>
          <exon e_start="88374" e_stop="87761"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAGTTTAGTTTTTACCTAGTAATGCTTCAAAAATTGAAACCATTGGAAGTCATAAGTCCCAGTTTGCTGGTATCTGCAAAACCTATCTTGTTCCCTCCTACCTATTTTCGCTTTTTAATCAGTTTTTCATTTTAAAATTACAGAAAATCATGAGTTGGAAATTGGATTTTGTAGATAACCAAAGTTTAATGAGATAGGCATAGTCAGGTTTTGAGTTGGGATGACCTGATAGGGCAATTTTCTTCCATGAGAATAGGCTGATGGAAGTAGATAATTGCTGGAACATAAGGTTGGTCAACTGTGTTATCATCTGCCTGGTGATATATATACAATCTGCCTTTGCACAAGAAGGTGAGTCTACATATATCATGTTTGAAGTTTTTTTTAGTTTGACAATGATATAAGAGTTACCAATTGGTTTGATATCAATAAGATAGTTGCTCTTTCCTCTATTGTGAATGATATTGATCATCGTCATCCTGTTGATCTCTATAACGTTTGTTGAATTCACTCAAGAACCCTAAGAATTCCCAAATAATCACCACATGAAGACTGATATCATTTGTCAAAAAGAAAAAAATTGCCTCAAACTATCATATAAATCTGTGTTTGATTACTCCACAAAGTGCTGCAAAACTCAACACCTCTAAACCTACTTCCACTGCATAAGTAGATCGTATTGACTACAAATCGAAAAAGAGCATAAGCAGATCAGGTAAAATAAACTTACCTGTCTTACAAAACACAGTAACCAGCTATTCGTAGCATATATATGTAATTGCAGATATGTCACATAATTAGGTTACTTAATCTAACTGATAAATTCCCATGTGGTTTCGAGCAGGATTTCTAAGTATTCAGTGCTGTGCTACTGCAAACTTTACGGAACCACGTACCAACTTAAGTTGGATTTCAGATGGAATTTGGTTCCCTGAAAATCAGAGTTGCATATCAAGGCCAGTGTACAAGAGTGAACACTATGAACGAGCTCGATCTTTTAGCTCAGACATTAGTCATAAGTGGTGTTACAGCTTGCCAACCAGGAAAGAGCATGACTATCTAGTAAGAGGTACATTTCTTTCTGTCAAACAAGAGAAGACTCTCCCACATAGTTCTTTTGTTGTTTTGATTGGTGTCACACCAATAGCCACAGTGAAGTCATCTGATGAACTTAAGGTTGAGGGAATTTTTAGAGCTACTAGAAGCTATACAAACTTCTGCCTATTGAAAAAGAAGGGGAATCCTTACATTTCTAAGGTTGAACTCAGACCGATAAATTCAGATTATCTCAAAAAGGAGCCTTCAGAAATACTCAAACTTGTACATAGAGTAGATGCTGGAAATAAGGCTGCGGAAATCAGGTATTCTTTCATCCTATCACACAATTATATTTTGGATTCGAAACAGAGTATATTCTTTCATAGTAACAAACATGTTATCATATCAAGTATCATGAAGTGATAATGTGAAGACTTGTCAACTCAGGTACCCATATGACCAGTACGATAGAATTTGGAGACCAGCCTCAAATCTAGAATCACAAGTTACTCAAACGCCGCCATCCATTATTAAGCATGTCTTTGCAAGAAAACATAGTTTATTACCTCCTGCATTCGTATTACGAACAGCCCTCACCCATCCAGAGAGATTGGACTTCTTGCATGAAGACCTTGACACAGGATATTATACTTACTCTCTCTTCCTGTACTTTCTAGAGCCCAATGACTCAGTTCAAGCTGGAGAAAGGGTGTTCTATATATACATTAACAACGAAAAGAGACTTAAGGTTGATATACTGGCTAGTGGTTCCAGATACCTGGATGTAGTTCTGAATTTCAGAGCAAATAGGTCTGTCAACCTGACAATGATCAAGGCCTCAAATCTATCTCAATTGGGACCCATTTGTAATGGTTATGAGATTTTAAAGGCTCTTCCTCGTGTTAAAGAAACAGCCACTGAAGAAGGTAATTTTACTCGAAAAATATGCATAGTAGCAGAATTTAAGATAGCAGTAGTAGAAAAGCATTACAGAAAAGTGCATTTATTATCTCTTTATATGTTTCAGTTGACATAATGGCGAATGTCAAGAAGGAATTATTGCAACAAAACAAAAACAATGAAATATGGAAGAGTTGGTCAGGAGACCCTTGTCTTCCCCTTCCCTGGCCGGGCCTAACTTGTGATCGAGTTAATGGTACTTCAGTCATCACTCAGATGTAAGTTATTCCCTCTATATCAAATACTCAAAGCAGTTTGTTTTTCTGAACATTATCAAATAATATGTCTTACCATTTTTTCCACCTCATTTATCCGTAGCATAGTAAGCACATTTGAGATAGATAGATTTAATCATTTTTCTCTTATTCCCTACCACAGAGATCTCTCCTCAGGTGGCCTTAGTGGACCTAGCCCTCCTAGCATCCAAAAACTGATGCACCTGAGAAAACTGTACGTCCAAGCCTTTGTCATCAACACTAATTCATTTTCTTTTAAAATAAATTTACAATCTGGTATAGTTTTACTAAGCAATCAAGTTATTTGCCAAGACAGGAATATCAGCATTAATGGCTCTAGTGGCACAAATTCACTCTTTACATCATACTTCACATACTCTACAAGGTAAATCTTCTATGTTGGTTTCCACATAAAATAATTGCAGAACGTGAAGAAGTTAAATAATATCACACAGAGGATTAACCTCTGAAAAAAATAACAAAGCTGTACAAAATGTTTAGTAGCAAGCTGTCTTCATGCTTCATATGTTATGATAAAAAAGTATGATGTGAAACTAATATCTTTGTCTATTTGTCCCTCCAGATACTTAAGCAGCAGGATTCATATTAGCAACAAGCTTTCTAGAAGCATAAAAGAATCTAATATTACAACAGAGTATGAAACCACTGCCCTGTCTTCAGAAAAAGAAAACAATTTCTATCATTTTACATTGTCCACTTTTTCTCTGAGGGTGGGGGAAAGCAATGCGATATCAAGAGCAGGGAACTGACAAAGAAGAGAAATAAACTAATTTCTTTTTTTTTTTTGCATTTCAGCAAAGGGATGGCTAATGTTAAACAAAACTCAAGTTCAACACATAAACTTGTGATTGGAGCAGCTGTAGGTACAGCCCTCCTGGTGATCCTTGCAATTGTTATCTCTGTGGTCTGCCTCTTCAAAAGACGAGTAATGGCAGGACCAAAATTTCTTATGAGAAATTACTCGATCACAAGGAGTAAGTACACTCTCAGCACACTAGAAATAATCCTGCACGCATAATGCATGATAATATATCAAGATAATTTAAGAATCTTTTCTTGTTGCTTGCAATAGCTTAAGACTGGAGTCAACAAGCATAAATCATAAAAGTTTTCATGACTAAGAAAAGCAGAAACTGTTACTATATCATCTGTCGCAAAGAAGCTTTTTTGACAGGAACTCCAGAAATTTGAAACTGAGTTTATATCTTTAACATTTGGTACTTAAACTCAACGAAGCAATATGCTCAAAAAAAAATTTCAAATGCAGATGCAGTATACTCAGTACCAAGCATGGATACTACCATGATGAAGTCAATATCCTCCAGGAACTTCAAATTGGAATATATAGAAGCTATTACTCAGAACTACAAAACTTTGATAGGTGAAGGTGGCTTTGGATCCGTTTACCGTGGTACCTTACCTGATGGTGTAGAAGTGGCTGTAAAGGTCAGGTCAGCCACTTCGACTCAGGGAATTCGAGAATTCAATAACGAGGTAACAATCTAGAGTATTTGTAGACCAATTTCCTCCCAACTTCCTTATTTGCATCAAAGCAACAAAAACATGTTACCTAAAATGTGAGAAAAGCATCAGCACATGGTGTGAGCAATGAATCTTCTATTTTATATTGCTGTTTCACATAGGGAATAAACTAACGATATGCTCCACAAGATTCCTCACAGATCCGTGATGTTCTCTTCATAATTACTTCCGACAAGCAGTGTTGCCTCTGAAATGTCTTAGCTCTTCAGGAGCCATCTATATAATAATGCATCTTATCCATGATAGTTAACCCATGCATCACAAATAACACAGCTTGCAAGTTAACCACTGCTGTAATTTGTATTACAGCTTAACCTTCTGTCAGCTATCACACATGAGAACCTGGTCCCTCTTATTGGCTACTGCTGCGAGAATGAACAGCAGATTCTGGTTTATCCATTTATGTCAAACAGCTCCCTACAGGATAGGTTATATGGTACTGCATACATAAGCAAATTCCTGTCTATCACTTTATCATAAGAACCAGCACTAATTTCTTGTTTGTTCCTTCATCTTGTTTAGGAGGAGCAGCAAAAAGGAAGATTCTAGACTGGCCGGCCAGACTTTCCATTGCGTTAGGAGCAGCGAGAGGCAAGTAACACAAGACTCTGCAATTCATGCAGCTCTTCAATGAAATAAGCCAATATCTATGGACTTAAGCATGCGTAAAAAAAAGAGAACGTATTTCCTAAGAGACAAAGATTGAAGGCAGAATTTAATTGAGTTAAACAATCAATCATTCCCTAGCACTTGCTATGAAAACACATTTGTAAACAGAAAATACCTAAGTATGCCGTTTTCATTTATGTCATTTTCTCTTAACCTTCTTCAGGTTTGCTGTACCTTCACACATTCTCGGAGCGTTGTCTGATCCATAGGGACGTCAAGTCAAGCAACATACTCTTGGATCAGAGCATGTGTGCCAAGGTTGCTGATTTTGGATTTTCAAAATATGCATCTCAAGAAGGGGATAGTGGTACTTCTTTAGAAGTAAGGGGGACAGCTGGGTACTTGGATCCAGAGTAAGTATTTTCTCTTCTAGATTGTGTCGTCATTGGGAAATTAGAACCAGAGATAAGTTTCTAAAGCATAGCCTAATAGACAGCTCTGCTACCTTAATATGGGTTACACGAAGTGATTATTATTTGAATCATCCGCAAGAGATTCTATTAGTATATTTATTGACTTTATTTTCATTATAATTCACCATAGCACAAATGATTCAAAAATCTTTGGGGAAATCCAGCTCATGTCTTTTTCATGAATTCTTTCTGCATAGGTACTACTCGACCCAACGTCTGTCAGCAAAAAGTGATGTCTTCAGCTTTGGAGTTGTCCTACTGGAAATCCTCACAGGTCGAGAGCCTCTCAATATTAACAAGCCAAGAAATGAGTGGAGCTTGGTTGAATGGGTATGGCCCAACTTGGCAAGTTATTTCTTTTAACTGAAATTATCCAGATACAAATTGCTACTATTCCTGAATCCTCAGAACCAAACAGTCTCTTCCCATAATTTATCTGCAGCAAACTACAGTGCCATAAAAAACTGAAAGAGCATCTTTACAGAAAGAACTTCTGTTGTTATTACGACTTACGCGATAATTCACAGCTACTTAGATGATAAACTGATGTTGATTGCTTAACTACTTTGCAACTATATGTAATACTCTTTTGATTTGCATGTTTACATCTGATCACATGCAAGTATTCACTTTGAAATACAGGCGAAACCTCTAATAAGAAGCTCAAGAGTTGAAGAAATTGTGGATCCCACTATCAAGGGAGGGTATCATGGTGAGGCGCTGTGGAGAGTGGTAGAGGTGGCTTTGGCATGCACAGAGACATACTCGACTTACAGACCATGCATGGCGGACATTGTAAGAGAGCTCGAGGATGCATTGATAATAGAAAATAATGCATCAGAATACTTGAAGTCCCTAGACAGCTTTGGAGGATCAAACCGTTTCTCCGTAGAAAGGTCCATTGTCCTTCCACCTATTAAATCTCAAACAGAACCATCCAGTCTCCTCTCAAAACCAGCCCCTCCACAACCAAGGTAAATGCTGTAGAGGAATGGATTTAAACTGATTGCAATAGATAACAGAATTCTTAGAAAAGTGTTTGGAATTTTTGCAAATTACTCCTCAAATTCCTTTTAAGTTAAATCTCGTTAAACTGTTCATTCAGTAGAGCAGATTTTGTTATACATACCAGAGAACAGGAAACAGTGTTGTCAAAGGTGTGCTTAAGCCCCAAAGTGAGGCATACTTTCCTTGCGATTGAGATCTTGAAGACTGATATTTCACTTTATCGTAAAAAAAATTCAATTTCTTTGTCC</genome_strand>
        <mrna_strand>TTTAGTTTAGTTTTTACCTAGTAATGCTTCAAAAATTGAAACCATTGGAAGTCATAAGTCCCAGTTTGCTGGTATCTGCAAAACCTATCTTGTTCCCTCCTACCTATTTTCGCTTTTTAATCAGTTTTTCATTTTAAAATTACAGAAAATCATGAGTTGGAAATTGGATTTTGTAGATAACCAAAGTTTAATGAGATAGGCATAGTCAGGTTTTGAGTTGGGATGACCTGATAGGGCAATTTTCTTCCATGAGAATAGGCTGATGGAAGTAGATAATTGCTGGAACATAAGGTTGGTCAACTGTGTTATCATCTGCCTGGTGATATATATACAATCTGCCTTTGCACAAGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTCTAAGTATTCAGTGCTGTGCTACTGCAAACTTTACGGAACCACGTACCAACTTAAGTTGGATTTCAGATGGAATTTGGTTCCCTGAAAATCAGAGTTGCATATCAAGGCCAGTGTACAAGAGTGAACACTATGAACGAGCTCGATCTTTTAGCTCAGACATTAGTCATAAGTGGTGTTACAGCTTGCCAACCAGGAAAGAGCATGACTATCTAGTAAGAGGTACATTTCTTTCTGTCAAACAAGAGAAGACTCTCCCACATAGTTCTTTTGTTGTTTTGATTGGTGTCACACCAATAGCCACAGTGAAGTCATCTGATGAACTTAAGGTTGAGGGAATTTTTAGAGCTACTAGAAGCTATACAAACTTCTGCCTATTGAAAAAGAAGGGGAATCCTTACATTTCTAAGGTTGAACTCAGACCGATAAATTCAGATTATCTCAAAAAGGAGCCTTCAGAAATACTCAAACTTGTACATAGAGTAGATGCTGGAAATAAGGCTGCGGAAATCAG............................................................................................................................GTACCCATATGACCAGTACGATAGAATTTGGAGACCAGCCTCAAATCTAGAATCACAAGTTACTCAAACGCCGCCATCCATTATTAAGCATGTCTTTGCAAGAAAACATAGTTTATTACCTCCTGCATTCGTATTACGAACAGCCCTCACCCATCCAGAGAGATTGGACTTCTTGCATGAAGACCTTGACACAGGATATTATACTTACTCTCTCTTCCTGTACTTTCTAGAGCCCAATGACTCAGTTCAAGCTGGAGAAAGGGTGTTCTATATATACATTAACAACGAAAAGAGACTTAAGGTTGATATACTGGCTAGTGGTTCCAGATACCTGGATGTAGTTCTGAATTTCAGAGCAAATAGGTCTGTCAACCTGACAATGATCAAGGCCTCAAATCTATCTCAATTGGGACCCATTTGTAATGGTTATGAGATTTTAAAGGCTCTTCCTCGTGTTAAAGAAACAGCCACTGAAGAAG.....................................................................................................TTGACATAATGGCGAATGTCAAGAAGGAATTATTGCAACAAAACAAAAACAATGAAATATGGAAGAGTTGGTCAGGAGACCCTTGTCTTCCCCTTCCCTGGCCGGGCCTAACTTGTGATCGAGTTAATGGTACTTCAGTCATCACTCAGAT................................................................................................................................................................AGATCTCTCCTCAGGTGGCCTTAGTGGACCTAGCCCTCCTAGCATCCAAAAACTGATGCACCTGAGAAAACT......................................................................................................GAATATCAGCATTAATGGCTCTAGTGGCACAAATTCACTCTTTACATCATACTTCACATACTCTACAAG......................................................................................................................................................................................................ATACTTAAGCAGCAGGATTCATATTAGCAACAAGCTTTCTAGAAGCATAAAAGAATCTAATATTACAACAGA.................................................................................................................................................................CAAAGGGATGGCTAATGTTAAACAAAACTCAAGTTCAACACATAAACTTGTGATTGGAGCAGCTGTAGGTACAGCCCTCCTGGTGATCCTTGCAATTGTTATCTCTGTGGTCTGCCTCTTCAAAAGACGAGTAATGGCAGGACCAAAATTTCTTATGAGAAATTACTCGATCACAAGGA.....................................................................................................................................................................................................................................................................................................ATGCAGTATACTCAGTACCAAGCATGGATACTACCATGATGAAGTCAATATCCTCCAGGAACTTCAAATTGGAATATATAGAAGCTATTACTCAGAACTACAAAACTTTGATAGGTGAAGGTGGCTTTGGATCCGTTTACCGTGGTACCTTACCTGATGGTGTAGAAGTGGCTGTAAAGGTCAGGTCAGCCACTTCGACTCAGGGAATTCGAGAATTCAATAACGAG.....................................................................................................................................................................................................................................................................................................................................................................CTTAACCTTCTGTCAGCTATCACACATGAGAACCTGGTCCCTCTTATTGGCTACTGCTGCGAGAATGAACAGCAGATTCTGGTTTATCCATTTATGTCAAACAGCTCCCTACAGGATAGGTTATATG......................................................................................GAGGAGCAGCAAAAAGGAAGATTCTAGACTGGCCGGCCAGACTTTCCATTGCGTTAGGAGCAGCGAGAG.................................................................................................................................................................................................................................................GTTTGCTGTACCTTCACACATTCTCGGAGCGTTGTCTGATCCATAGGGACGTCAAGTCAAGCAACATACTCTTGGATCAGAGCATGTGTGCCAAGGTTGCTGATTTTGGATTTTCAAAATATGCATCTCAAGAAGGGGATAGTGGTACTTCTTTAGAAGTAAGGGGGACAGCTGGGTACTTGGATCCAGA.................................................................................................................................................................................................................................................................GTACTACTCGACCCAACGTCTGTCAGCAAAAAGTGATGTCTTCAGCTTTGGAGTTGTCCTACTGGAAATCCTCACAGGTCGAGAGCCTCTCAATATTAACAAGCCAAGAAATGAGTGGAGCTTGGTTGAATGG........................................................................................................................................................................................................................................................................................................................GCGAAACCTCTAATAAGAAGCTCAAGAGTTGAAGAAATTGTGGATCCCACTATCAAGGGAGGGTATCATGGTGAGGCGCTGTGGAGAGTGGTAGAGGTGGCTTTGGCATGCACAGAGACATACTCGACTTACAGACCATGCATGGCGGACATTGTAAGAGAGCTCGAGGATGCATTGATAATAGAAAATAATGCATCAGAATACTTGAAGTCCCTAGACAGCTTTGGAGGATCAAACCGTTTCTCCGTAGAAAGGTCCATTGTCCTTCCACCTATTAAATCTCAAACAGAACCATCCAGTCTCCTCTCAAAACCAGCCCCTCCACAACCAAGGTAAATGCTGTAGAGGAATGGATTTAAACTGATTGCAATAGATAACAGAATTCTTAGAAAAGTGTTTGGAATTTTTGCAAATTACTCCTCAAATTCCTTTTAAGTTAAATCTCGTTAAACTGTTCATTCAGTAGAGCAGATTTTGTTATACATACCAGAGAACAGGAAACAGTGTTGTCAAAGGTGTGCTTAAGCCCCAAAGTGAGGCATACTTTCCTTGCGATTGAGATCTTGAAGACTGATATTTCACTTTATCGTAAAAAAAATTCAATTTCTTTGTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U591402" ref_strand="+" ref_description="SGN-U591402 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>aacttactgcatactccgccggcggggtacgccgccggaactgtccgatcaaagccctaagtcaatctctcgcacaatattagaagaaaggacaaagatcatgttattgaccgcaagaacttgtgagattttggagaaagttcaatttcatgtgaggaggacctactttgaacacgtgcatatccttctccattgcgagtattttccagtgggtttgggattcctctgagttcccttaatcaaattgaatgcaggcgatggttcattcaagctctaaggttacctgatgtttatacagtgaaggtccttcaattttttgtatatcaattcaagatttgtttccaaaggaccaatacataaattactcaataacataacgacgagttttgacagtgcttctgaaaagcatggggagtcaaaaggagtacacacgacggagagtcaaaagaagttttcgtgtattttatgcgttaaactaactgatgaggatctggtagaatttatttgacagcttgctgagacagctggatcatcaactgtaccctatcagtgaatcaggtcctgaatggcttgcaggagtgaaaggaaaattgcattgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0073P13.2" temp_strand="+" temp_description="C02HBa0073P13.2  AC215377.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0073P13 sequenced_by:kribb upload_account_name:korea">
        <position start="100722" stop="110614"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101022" g_stop="101111" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="90" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101112" i_stop="101335" i_length="224">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101336" g_stop="101397" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="152" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101398" i_stop="108149" i_length="6752">
            <donor d_prob="0.843" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108150" g_stop="108300" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="303" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108301" i_stop="108367" i_length="67">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="108368" g_stop="108384" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="320" r_length="17" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="108385" i_stop="108510" i_length="126">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.676" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="108511" g_stop="108594" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="404" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="108595" i_stop="109274" i_length="680">
            <donor d_prob="0.067" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="109275" g_stop="109321" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="451" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="109322" i_stop="110064" i_length="743">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.599" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="110065" g_stop="110124" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="511" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="110125" i_stop="110243" i_length="119">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.353" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="110244" g_stop="110310" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="512" r_stop="578" r_length="67" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0073P13.2" gen_strand="+" ref_id="SGN-U591402" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>578</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0073P13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U591402" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101022" e_stop="101111"/>
          <exon e_start="101336" e_stop="101397"/>
          <exon e_start="108150" e_stop="108300"/>
          <exon e_start="108368" e_stop="108384"/>
          <exon e_start="108511" e_stop="108594"/>
          <exon e_start="109275" e_stop="109321"/>
          <exon e_start="110065" e_stop="110124"/>
          <exon e_start="110244" e_stop="110310"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTTACTGCATACTCCGCCGGCGGGGTACGCCGCCGGAACTGTCCGATCAAAGCCCTAAGTCAATCTCTCGCACAATATTAGAAGAAAGGTAAGTAATGAGGATTTCCAGTTACTTCTCTGTTTCTATATTGTACAGGACAAAGACCATGGTATTAGACTATGGGAACTTGTAATATTCATCTTCAAATCAATTTCACTCTTAATATGTTGCTAGGGTTCAAGATGCCAACACTCACTTCAATTCTTGAAAATTAAAGAAGGAGAACGTTTGTCAATTTTTATTAGTAACTGTTTTATATTGTGCAATTCAAGGACAAAGATCATGTTATTGACCGCAAGAACTTGTGAGATTTTGGAGAAAGTTCAATTTCATGGTAATTCTTCACTATCTCATAAGTATTACTGATGCTTGCAGCCACGGCATTATTTGTGTTTTGAATTAGCCATGCGCCACCCACACACAGAACCACCCTTTTCGTGATATTACCCATGCACTCCCTTTTTTCTTATTCTCACTTCTCACTCTGCTCCGTTTTATACACAATGAAGATTTCGAGGTTTTCATCCGTCGATGTTCAATAAAGCATGTTATCTCCTGAGTTAAACAACTGTTGCTAGGCACTGCACTTCAGGTGGGTCTATGAGATTTTAGGATAAGTCCTTCTCTTTGTCTTTCTTCTCTGTTTCATAGTCAATCTGTTTCTTGCAGCTATGCTGCGTTTCAAAGCTTTTTGAGTTAATTGTGTTTCTGTGTTGGAAAGTGTTTTTTTTTGGTTGTTACTTTAACCACCTTTTGAAGAAGATAAACGACCTTTCACTATTCTTGACTTATTACTCTCTCTGGTGTAACTCAAAAAGCAATCAAATATGTCCTCCTTTGAGCTGCTTGGCACGGCAACTCAGGTGGGTCTATCAAACTTAATAGATAGTTCCATTTTATGGTGTATATTCTCCGTGTCGTAAGACTAACTGATGCTTGCCGCCACGATAAATACCACTGCTTTTGAGCTGATACTTGTTTGGGCTTTTGGCAATATTCATTTTCTTTACCCCTCCACACCACCCTTTTCGTGAAATTACACATGACCTTCCACTTTCTTATTCTTATTGTTCTCTTTGCTCCATTTATAAACCATGAGGATATGGAGTTTTTGTTTCGTGGAAGTTTTGTAAAACTTGTTTTCTCTCTAGCTGAGTAACTGGGACATGGCACAGCAAATCAGGTGCGCATCTATGAGATTTTGGGAAACAATTTTAATTTCTTAGTGTTTCTCCTCTTTCTCAATAGGCTAACTGATATTTGCAGCCACAACGGATTTCCAAGTTGTTGAGCTATTTGTGTTTTGGCTTCAGAAAGTTCAGTTTTTTCCTCATCAACCTACCCTTTCGCAAGTTCCCTAGTTTTTTTATTTTTCTCTCTGGTTTTACTGAAAATGGCCATCAAACATGTTATTTCTTGAGCTGAAAATTGTTGCTTGGCATGGCACCTCAGGTGGGGATCTGGGAGATTTTGGATAAAGTTCCATTTTATGGAGTTTCTTCACTATCTCATAAGGCTAATTGAGGCTTGCAGCCATGACAGATTTCTAAGCTTTTGAGCTGATTCATGTTTTAACTTAGCCATGCTTTCGCCCCTCTCAGAACCACCTTTTTTTCGTGATATTACTCTTGCACTCCCTCTTTTCTTATTCTTATTACTCACTCTGCTCCGTTTTATATACAATGAAGATGTGGAGGTTTTCATCTGTCGATGTTGAAACATGTTTTCTCTCGAGCTAATTAGCTGTTGCTAGCACGACACATAATCTGTTTCTTGCAGCCATGCTGCGTTCAAAGCTTTTGTATTGATCGTGTTTTGGCGTCGGTAAGATTTTTTTTTCACTTTAACCACCTTTTTTGTGAAAGTACACGACCTTCCACATTCCTTTTCTTATTACTCCCTCCGGTATATCTCAAAAAGCAATCAAACATGTTCTCTCTTTAGCTAGAGAACTGTTGATTGGCATGGCAACTCAGGTGGGTCTATCAGACTTAAGAGGAAATTCCATTTGATGGTGTATCTTCTCCGTCTCAAAAGGCTAACTGATGCTTGCAGCCACGACAAATTCCAATGCTTTTGAGCTGATTGTTGTTTGGGCTTTTGGCAATGTTCATTTTCTTCCCCCCTCCACACCAAACCACCCTTTTTGTCCACTTCTCTTATTGTTTTTGATTCTTTTTGCTCCATTCTATAAACCACAAGAATATGGAGTTTTTTTTTTTTTGGTGTAAGTTTTGTAAAACTTGTAATCTCTCTAGCTGAGAAACTGGGTCTTGGCACGGCACATCACGTGGGTCTATTGGTGTTTCTTCTCTGTGTCATAAGGCTAACTGATGCTCGCAGTCACGATGGATTTCAAAGCTTTTTAGCTAATTGTGTTTTGGCTTCACAAAGTTCTGTTTTTTTCTCACCAACCCACCCTTTTTCTGAAATTACGCATAATTTTTCTTGCTTTTATTTCTCTCTGGTTTTACTCGAAATGGCAATCAAACATGTTCTCTCCCGAGCTGAAAAACTGTTTCTTGGCATGACACCTCAGTTTGGTTCTCTGAGATTTTGGAGAAAGTTTCATTTCATGATGTTTCTTCACTATCTCACAAGGCTAACTGATGCTTGCAGCCATGACAGATTCCTAAGCTTTTGAGCCATTGCCCCCCCCCCCCCTCCCCTCAGAACCACCCTTTTCGTGATATTTCCAATGCGGAGCTCCTTTCTTGTTCTTATTACTCTCTTGTATAACTCAAAAAACAATCAAATATGTCCTCCTTTGAGCTGCTTGGCACGGCAACTCAAGTGTGTCTATCAGACTTAAGAGAAAGTTCCATTTTATGGTGTATCTTCTCCATCTCATAAGGCTAACTGTTGCTTGCCGCCACGATAAATTCCAATGCTTTTGAGCTGATACTTGTTTGGGCTTTTGGCAATATTCGTTTTCTTTACCCCTCCACACCACCCTTTTCGTGAAATTACACATGACCTTCCACTTTCTTATTTTTATTGTTCTTTTTGATCCATTTATAAACCGTGAGGATGTGGAGGTTCTTTTTTGTGGAAGTTTTGTAAAACTTGTTTTCTCTCTAGCTGAATAACCAGGACATGGCACAGCAAATCAGGTGCGTCTATGAGATTTTGGGAAACAATTTTCATTTCTTAGTGTTTCTCCTCTTTCTCAATAGGCTAACTGATTTTTGCAGTCACGATGGATTTCAAAGCTGTTGAGCTATTTGGGTTTTGGCTTCACAAAGTTCAGTTTTTTCCTCATCAACCTACCCTTTCGCAAGTTCCCTTGTTTTTATTTCTCTCTGGTTTTACTGATAATGGCCATCAAACATGTTCTTTCTTGAGCTGAAAATTGTTGCTTGGCATGGCACCTAAGGTGGGGATCTGGGAGATTTTGGATAAAGTTCCATTTCATGGAGTTTCTTCACTATCTCATAAGGCTAACTGAGGCTTGCAACCATGAGAGACTTCTAAGCTTTTGAGCTGGTTCGTGTTTTAACTTAGCCATTCTTTTCGCCCCTCTCAGGAATCAACTTTTTCGTGATATTACTCTTGCACTCCTCTTTTCTTATTCTTATTACTCACTCTACTCCGTTTTATATACAATGAAGATGTGGAGGTTTTCATCTGTCGATGTTGAAACATGTTTTCTCTCGAGCTAATTAGCTGTTGCTAGCACGACACATAATCTGTTTCTTGCAGCCATGCTGCGTTTTAAGCTTTTGTATTGATCGTGTTTTGGCGTCGGTAAGATTTTTTTTTTCACTTTAACCACCTTTTTAGTGAAAGTACACGACCTTCCACATTCCTTTTCTTATTACTCCCTCCGGTATATCTCAAAAAGCAATCAAACATGTTCTCTCTTTAGCTAGAGAACTGTTGATTGGCATGGCAACTCAGGTGGGTCTATCAGACTTAAGAGGAAATTCCATTTGATGGTGTATCTTCTCCGTCTCAAAAGGTTAACTGATGCTTGCAGCCACGACAAATTCCAATGCTTTTGAGCTGATTGTTGTTTGGGCTTTTGGCAATGTTCATTTTCTTCCCCCCTCCACACCAAACCACCCTTTTTGTCCACTTCTCTTATTGTTTTTGATTCTTTTTGCTCCATTCTATAAACCACAAGAATATGGAGGTTTTTTTTGGTGTAAGTTTTGTAAAACTTGTTTTGTCTCTAGCTGAAAAACTGGGTCTTGGCACGGCAATACGTGAGTCTATTGGTGTTTCTTCTCTGTGTGATAAGGCTAACTGATGCTCGCAGCCACGATGGATTTCAAAGCTTTTGAGCTAATTGTGTTTTGGCTTACAAAGTTCTGTTTTTTTCTCACAAACCCACCCTTTTCTGAAATTACGCATAATTTTTCTTGTTTTTATTTCTCTCTGGTTTTACTCGAAATGGCAATCAAACATGTTCTCTCCTGAGCTGAAAAACTGTTTCTTGGCATGGCACTTCAGTTTGGGTCTCTGAGATTTTGGAGAAAGTTCCATTTCATGATGTTTCTTTACTATCTCACAAGGCTAACTGATGCTTGTAGTCATGACATATTGCTAATCTTTTGACCTGATACGTGTTTTGACCTAGCCATTGCCCCCCTCCCCCCCCCCCCCCCCCCAGAACCACCCTTTTGTGATATTACCCATGCGGAGCTCTTTTCTTGTTCTTATTACTCTCTCTGGTATAACTCAAAAAACAATCAAATATGTCCTCCTTTGAGCTGCTTGGCACGGCAACTCAGGTGTGTCTATCAGACGTAAGAGAAAGTGCCATTTTATGGTGTATCTTCTCCGTCTCATAAGGCTAACTGTTGCTTGCCACCACGACAAATTCCAATGCTTTTGAGCTGATACTTGTTTGGGCTATTGGTAATATTCATTTTCTTTACCCCTCCACACCACCCTTTTCGTGAAATTACACATGACCTTCTACTTTTCTTATTCTTATTGTTTTCTTTGCTCCATTTATAAACCATGAGGATTTGGAGGTTTTTTTTGTAGTACTTGTTTTCTCTTGAGCTGAATAATCGGGACTTGGCACAGAACATCAGGTGTGTCTTTGAGATTTTGGAAAACAATTTTCATTTCTAAGTAATTCTCGTCTGTCTCAAAAGGCTAACTGATTTTTGCAGCCATGGAGGATTTCAAAGCTGTTGAGCTGTTTGTGTTTTGGCTTCGCAAAGTTCAGTTTTTTCCTCATCAAACCTTCCCTTTCGCAAGTTTTCTTGTTTTTATTTTTCTCTCTGGTTTTACTCAAAATGGCAGTCAAACATGTTCATTCGTGAGCTGAAAAATTGTTGCTTGGCATGGCACCTCAGGTGGTGGTGGTCTGTGAGATTTTGGATAAAGTTCCATTTCATGGTGTTTCTTCACTATCTCATAAGGCTAACTGAGGCTTGCAGCCATGACAGAATTCTAAGCTTTTGAGCTGAATCGTGTTATAACTTAGCCATGCTTTTCCCCTCTCAGAACCACCCTTTTCGTGATATTACCCTGTCACTCCCTCTTTTCTTTTTCTTATTAGTCACTCCGCTCCGTTTTATATACAATGAGAATGTGGAAGTTCTCATCTGTCGATGTTGAAATATGTTTTCTCTCGAGCTAATTAGCTGTTGCTAGCACGACACTTAATCTGTTTATTGCAGCCATGCTGCGTTCAAAGCTTTTGTATTAATCGTGTTTTGCGTTGGTAAGATTTCTTTTTGTGACTTCAATGACCACCTTTTTAGTGAAAGTACACGACCTTCCACATTGCTATTTTTATTATTCCCTCTGGTATAACTCAAAAAGCAATCAAAGGTGTTTTCTTTTTAGTTAGAGAACTGTTGCTTGGCATGCAACTCAGGTGGGTCTGTCAGACTTAAGAGGAAGTTCCATCTGATGGTGTATCTTCTCCGTCTCAGAAGGCTAACTGATGCTTGCAGCCACAACAAATTCCAATGCTTTTGAGCTGATTGTTGTTTGGGCTTTTGGCAATAAAATTTCCACTTCTCTTATTGTTTTTTTTTCTTTTTGCTCCATTCTATAAAACCACAAGAATATGGATCTTTTTTTTTTTTTGGTGTTAGTTTTGTAAAACTTGTTCCCTCTAGCTGAAAAACTTGGTGTTGGCACGACACATCACGTGGGTATATGAGATTTAAGAAAATAATTTCAAAGCTTTTGAGCTAATTGTGTTTTGGCCTCACAAAGTTCTGTTTTTTCCTCACCGACCCACCCTTTTTCTGAAATTACACATAATTTTTCTTGTTTTTATTTTTCTATCTGGTTTAACTCGAAATGGCAATCAAACATGTTCTCTCCTGGGCTGAAAAACTGTTTCTTGGCATGGCTTTTGACCTGATTCCCCCCCCCCCCCCTCAGAACCACCCTTTTCGTGATATTATCCATGCGGAGCTCGTTTCTTGTTTTTATTACTCACTCTGTTCCGATTTATACACAATGAAGATTTGGAGGGTTTCATCTGTTGATGTTCAATCAAACATGTTATCTCTCGAGCTAAACAACTGTTGCTTGGCATGGCACTTCAGGTGGGTTTATAAGACTTTAGGAAAATTCCATTTCTTCTCTGTCTCATAATCAATCTGTTGTTTGCAGCCATGCTGCGTTTCAAAGTTTTTGAGCTAATCGTGTTTTGGCGTCGGAAAAATTGTTTTTGTCACTATAACTACCTTTTTGGGGAAAGTACGCGACCTTCCACTTTTTTGTTCTTTTAACTCTCTCTGGTATAACTCAAACTGCAATCAAACATGTTCTCTCTTGAGCTAGAAAACTGTGGCTTGGCATGGCAACTCAGGTGGGTATATCAGACATAAGAGGAAGTTCCATTTCATGGTATTCTCCACCTCATAAAGCTAACTATGCTTGCAGCCACGGCAAATTCCAATGCTTTTGATCTGATTCTTGTTTGGGATTTATGCAATGTTCATTTTCTTTCCCCCTTCACACCAAACCACCCTTTTTCATGAAATTACACACGGACTACCACTTCTCTTGTTCTTATTATTCTCCACACCAAACCACCCTTATCGTGAAAGTGCTCAACTGATAGGACACTTTCCGGTTTTATAGATTTTCTTCATTTGCATGCAGTGAGGAGGACCTACTTTGAACACGTGCATATCCTTCTCCATTGCGAGTATTTTCCAGTGGGTTTGGGATTCCTCTGAGTTCCCTTAATCAAATTGAATGCAGGCGATGGTTCATTCAAGCTCTAAGGTTACCTGATGTTTATACAGTGAAGGTATAAGATGTGATAAGTTTATCTTTTCTATTCTCTGTTTTCCTAACAACCACTATTTAATTTGCAGGTCCTTCAATTTTTTGTGTATCCAATTGTTTCAGTATACTTTCCTGGACAAAGAAACCTGAAAACTAACCTTTGGTTAGCATTTACTATATTGGATGCTTGCTTTTTACGGTGTTTTTGTTTTCCTTGACCTCCGTAATGCAGATATCAATTCAAGATTTGTTTCCAAAGGACCAATACATAAATTACTCAATAACATAACGACGAGTTTTGACAGTGCTTCTGAAAGTGAGCAGTGAAGTAAATCTCAGATATATCCATTGTTTTTGTTGAACCTAAACTGCCCTAGATCTTTATATGATTCGATTTTGGAGCGTTCAAAGACCTCTGTGGAATTTAAGGCGCGAGATCTTTTGATGACATATATTATTTATTAAATAATTGTTTTGGGGTTGGGAAACAAGTGTAAGTCTTTGGATTTTTTTTTTTGTATAATTGAGTTTGTGTTAAGGCTTGTTTTGTGAGAATTAGTTTGGGTTGTTTTCTGAAAAAAATATTTTAAAACACCTAATCATTTTTGAAACTCTAATGTGGGTGATAAATAGGTTAAAACTGGCTAAACATCACTATTTATTACTAATTGTATAGGATTTCAATGTATTAAAAAGGAGCCCCTGTTTAATAAGAGCCCCTGACAGCCAAGGCCTTTGCGTTGCAATGTTCCCGTAGAACAAAATTATCTCTCACTTGCTTTGGGAGAACAGTACAAAACCACGTCTCTAGATTCTTTTGGTTGCAAAACACAACAGGCCAATGTTAACAAGGACATTTCATACATATTTATTTTACTGATTAGAGTGTTGTATTTCTTTATTACAATGTGTTTGCTGCTTTTAAGACTGACAATTCTTCCAGTTTGAATTAACTCTCCTGATTTTTGCTTGCCGATCATTCCTGACCTGAATAAGAGCATGGGGAGTCAAAAGGAGTACACACGACGGAGAGTCAAAAGAAGGTAAGCCAACTATTCCCGACCTCAATTAGAGCTGAATTTTTCTTGTGCATGTTTTAGTTATTTAGTTTCATTTCTTTCACGCAATTTTCAAGAGTATCATAGATTGCATTGTTATTAATCATGAAAACATTAGAGATTACAATGTCTATTTTAGGTCTCCTAGGTCACAATCTCTTTCAAATTCCATCTTGCTTTTGTTCTGATCTTGTAATAGAATCGTTTTTACTCAAATTTTCAGAATTTGCTGCAATAAAAACCTAAAGTTCTTAGATTCTGGGACAAAATTTGCTCCATCCAGAGATTACAGTCGAGAACCTCTTACGACACTTATTACTTATTCTCTTCAACATTTGTATTCTTCCCTCTGAAGGATATATACCTTTCTAGATGTGGAAAACTAAGAACGACATGCACTTCGTCAATAGCTTAGTTTATATCTGTTCTATGCTCTATCTTGTTGAAAGCAAGAAGGATTTGTGAGGGTTTAAGCCTTTTAAGTGTCATTTGTTCGCATTCTCTCTTAATGGTCCATTTTATGTTTTAATTGGGTTGATTATAGGAAGTGAATTATGAATTATAACTTATAAGGGAACAGTTTTTTTTGTTCTAATACCATCTGTATTAAGACAATGTTCTCTCCTTTTGAATTATAAGGCCTAGAAGCTTGAATAGTTTCCAACTTAATTTGGAAAACTATTCATGAAATCATTCATGCTTTAATAATTGTTGTCTTGATAATACAGTTTTCGTGTATTTTATGCGTTAAACTAACTGATGAGGATCTGGTAGAATTTATTTGACAGGTTAGTCCATTGACACTAACTGGCTTATATTTTACTCCTTCATTAACTCTAATCTTCCTTATGGAATCTTGCTTAAATGCCGTGTCACGTTCTCGGAATAATGTATTTGCAACCCACAGCTTGCTGAGACAGCTGGATCATCAACTGTACCCTATCAGTGAATCAGGTCCTGAATGGCTTGCAGGA</genome_strand>
        <mrna_strand>AACTTACTGCATACTCCGCCGGCGGGGTACGCCGCCGGAACTGTCCGATCAAAGCCCTAAGTCAATCTCTCGCACAATATTAGAAGAAAG................................................................................................................................................................................................................................GACAAAGATCATGTTATTGACCGCAAGAACTTGTGAGATTTTGGAGAAAGTTCAATTTCATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAGGACCTACTTTGAACACGTGCATATCCTTCTCCATTGCGAGTATTTTCCAGTGGGTTTGGGATTCCTCTGAGTTCCCTTAATCAAATTGAATGCAGGCGATGGTTCATTCAAGCTCTAAGGTTACCTGATGTTTATACAGTGAAG...................................................................GTCCTTCAATTTTTTGT..............................................................................................................................ATATCAATTCAAGATTTGTTTCCAAAGGACCAATACATAAATTACTCAATAACATAACGACGAGTTTTGACAGTGCTTCTGAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATGGGGAGTCAAAAGGAGTACACACGACGGAGAGTCAAAAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCGTGTATTTTATGCGTTAAACTAACTGATGAGGATCTGGTAGAATTTATTTGACAG.......................................................................................................................CTTGCTGAGACAGCTGGATCATCAACTGTACCCTATCAGTGAATCAGGTCCTGAATGGCTTGCAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U578030" ref_strand="+" ref_description="SGN-U578030 Tomato 200607#2 [3 ESTs aligned] ">
      <seq>tccgtctttgatacaccagctaacttgaggacgattcagtgggtattcctccaagttcccttaacaaattcaattcaagcataggggcattcaagctttcaggatacatctcaggtatcaattcaagatttgtttccaaaaaggaccagtacaagaatcacttaataacatagctatgagtttggacagtgcttctgacattgagcagcgaagtagatatattcactgtttctgttgaacctaaactacccaagataaatttgttttgatccgactttgtggaacctagatgatatgcatgctttccctgcaagctttggccttaaaggagaggctctgggctccacttctgatgtttctttgttggaaattgttactaaaagtcacgggaggccagatggatatcgtaattttttgaagggcagattttgtagacaagatgttggtgcaacagggaattaatgtataagcctatctcacacaggagttgatttttgtttgctagtataacggcccaaattgatggataaaagatgtggaaaaagaggttcaggcttagagttgcaaagcttcactttcttccctgcagccaaagaaacttactggagagtgcattcagtagagagattcaatcttcacagaatattctgtgcagaagtgcttctgaaaagcatgatccggagtccagattcctctgtcagagcaaaagttcaagtcgatcaattggctctcctgctcattgcacagctggcgtgaactggaaatccaaaagctctgcgcaacccctttcatctaatattttacctagagaggatgatttcctggataacaaattcagtgcttcagttagatccaactataaatctgactgtgaggcaggttcaggatgggaggatatgattttcaaacaattgtagctggcagttctagagaggatgcttatttagggtatcacttgaacttgatgacagntcaaatgtgatgcatgagagaaggaaacatttatttggagctgttctttatttgcacagaagcctgaaacgtgatggatcatctcctggatgtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0073P13.2" temp_strand="+" temp_description="C02HBa0073P13.2  AC215377.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0073P13 sequenced_by:kribb upload_account_name:korea">
        <position start="110856" stop="120927"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111058" g_stop="111096" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="0.949"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111097" i_stop="111187" i_length="91">
            <donor d_prob="0.984" d_score="0.00"/>
            <acceptor a_prob="0.621" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111188" g_stop="111262" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="114" r_length="75" r_score="0.947"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="111263" i_stop="111500" i_length="238">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="111501" g_stop="111663" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="277" r_length="163" r_score="0.963"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="111664" i_stop="111912" i_length="249">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.588" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="111913" g_stop="111924" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="289" r_length="12" r_score="0.500"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="111925" i_stop="112755" i_length="831">
            <donor d_prob="0.483" d_score="0.00"/>
            <acceptor a_prob="0.859" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="112756" g_stop="112886" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="420" r_length="131" r_score="0.985"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="112887" i_stop="112974" i_length="88">
            <donor d_prob="0.906" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="112975" g_stop="113058" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="504" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="113059" i_stop="113576" i_length="518">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.789" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="113577" g_stop="113610" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="538" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="113611" i_stop="120097" i_length="6487">
            <donor d_prob="0.975" d_score="0.00"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="120098" g_stop="120627" g_length="530"/>
          <reference_exon_boundary r_type="cDNA" r_start="539" r_stop="1067" r_length="529" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0073P13.2" gen_strand="+" ref_id="SGN-U578030" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>1068</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0073P13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U578030" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111058" e_stop="111096"/>
          <exon e_start="111188" e_stop="111262"/>
          <exon e_start="111501" e_stop="111663"/>
          <exon e_start="111913" e_stop="111924"/>
          <exon e_start="112756" e_stop="112886"/>
          <exon e_start="112975" e_stop="113058"/>
          <exon e_start="113577" e_stop="113610"/>
          <exon e_start="120098" e_stop="120627"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCGTCTTTGATTCACCAGCTAACTTGAGGACAATTCAGGTCTGGTTTCTTCCATTTTGTTCATTTTCTTATGGTGAGGATGACCTGATTTGCACACGTGCTTCTTCTTCTCATTGCCGCTGTTGTCCAGTGGGGATTTCTCCAAGTTCCCTTAACAAATTGAATGCAAGCATAGGGGCATTCAAGCTTTCAGGATACATCTCAGGTCCTGATGTTTACACAGTGGAAGTATACATGCATGGATAAAGAGCTGTTATAAGTTATCTTTTCTACACTTTGTTTCTTTAACAACCACTGTAGGTCATTCAGTATTTCTGTATCCACTTATTTCAGTATATTGTCCTGACAAAGAAAAACGGAAAACTAATCTTTGGTTAACATTTACTAAATTATATGCTTGTTTTTTGACGGTGTTTTTGTTTTCCTTGAACTTCGTTATGCAGGTATCAATTCAAGATTTGTTACCAAAAAGGACCAGTACAAGAATCACTTAATAACATAGCTATGAGTTTGGAAAGTGCTTCTGACATTGAGCAGCGAAGTAGATATATTAACTGTTTTTGTTGAATCTAAACTACCCAAGATAAATTTTTTTTGATCCGACTTTGGAGCCTTCAAAGATGTCCGTGGAACCTAGGTGTGCTTTTTGTTGGCATTTATGACTTAGATTCCTGTTTTTTGCTTACGCAATCATTTCTGCTTCCCTTTAAATAATTTTGCAGTCTTTTTTTTCTTTTGACAATTTTACAATAATTTTTGTAAATTTAGATATTTGCTACATCAATCTTCTTGGAGCCTTGCTATCTTTTGGAGATTGTGACATCCAGTTGTATATTAATTTTTGAGTGGGATCAGGGTAGAGGGTTGGCATATATTCTCAGGAGTTTTAAACTATTAGGTTAATCTAGGCCAATCTAATTCACAAGAAAAAATTCTGCTTTTCAGAAAAAATAGAGCCCTACCAAAACATTTAGGTCGATTTTCATTCTTCAGCTGTGAAGGTTGGAAACACAGCTTTGACCTATGAAGTATGTTATTGCTATTGATCTTTGGCATTATTCTAGAGACTGAAGAGCTGAAAATGTTGCTTGGCGTGACAGTTGGGTGGTTGTATGTGATTTAGTAGAAAGTTCCATTTCATAGTGCATCTTCTCTGTCCCATAAGGCTAAATGCTTCCTGCAGCCATGACAGATAACAAAGCTTTTGTCCTGATTCGTGTTTTGGCTTGGCAAAGTTAAGTTCCCTCACCCCCCCCCCCCCACCCCCCCACCCACACCAAACCACCCTTTTTTAAAAATTACACATGACCTTTCTCTTTTCTTATTCTTATTACTATCTCTGATCCATGTTATAAACCATGAGGATGTGGAGGGTTTGTCTTATGTGGAAGCTCAATAGAACTTTGTATGATTTCACAAGGGTTGTTGAGGAGTTGGTTTTCAACAGCCTCGATGCAGATACCACCAAGGTGTACTAATTTACCCTTTCAAAGTTTCAATATTTTTTTATGCTTTATTAGGTATGTAGAGTTATTTATATTGGTGCTTAGGTTTTTATAGCCCAGCTTATGTAGACTGTATATGTGTCTGTTTCTTTGTTTCTTTCATCTTCTGTTATGCTTCATTTTCGTCTGACCATTTTAACTATAGTTTCATATGCTTGCTTTACACCAGCGACATCAAACTATTGCCTTTCAGATGATATGCATGCTTTCCCTGCAAGCTTTGGCCTTAAAGGAGAGGCTCTGGGCTCCACTTCTGACATTTCTTTGTTGGAAATTGTTACTAAAAGTCACGGGAGGCCAGATGGATATCGTAATTTTTTGAAGGTAAAGTTGTTTTGAGTGTTAGTTGGTCATATCCATTAGGATAGGTATAAAACTACTATCTTGGTCTTTGTTCTTGCCATTGTTACAGGGCAGATTTTGTAGACAAGATGTTGGTGCAACAGGGAATTAATGTATAAGCCTATCTCACACAGGAGTTGATTTTTGTTTGCTAGTAAGGAAATTTGTTGAGATTTTTCTCTTTGCGGTTGTTGTTCATGATGTAGTTTTACAACCAACTAGTTCGAAGGAACCAAATGCAGTACTTCTAGTATGCTCACAATTCAAACAAATAAAAATATTGATTTACTTACTTTACTTCTAAAGCTATATTGATCTTTTAGTTTTCATATATAATCTTGAAGCCCAAAGAAGGTCTTGCTTTCTCTAAAAGTGTCTCTGCTAAGAATCTCCCTTGTGCATTCCAGTATCTCCTTTAAAATTGTTGATATTGAAAGGTGTGTTTGTTGTACCACTAACTTTAGGTTTTTACCTATCTGGTTTCTTACATTTTGTTGTTCATTTGCATGTCATGAGGATGACCTGCTTTGCACACATGCTTCTCCTTCCCCATTGCCGCTATTGTCTAGTGGGTTTGGGTTTCATCTTAGTTCCCTTAATAAATTGAATGCAAGCGATGGTTTATTCTAGCTCTCTGGATACATCTCAGCTCATGATGTTTACACAATGTAGGTATAACGGCCCAAATTGATGGATAAAAGATGTGGTAAGTTATTTTTTCTACACTTTGTTTCCCCTAAAAACCATTTCAACTTGCAGGTCCTTCAATATTTCTGTATCCAATTAGTTCAGTACATTTTCCTGACCTGAGAAAATGGAAAACTAATCATTGGTTAACATTTATTATATTTGATGCTTGTTTTGTACAGGGCGAAATGGTCTGATGGACCCATATACTTGTATGAGTTTATATTCTGACCTTTTAACTTTGCTCTTTGTCAACTGAATCTTTTAACTCAATAAATCTCAACATTTTAAATCCCATTGGCTTTGTGTGAACTTCAAACGCCCAATGAAAATGACATATCCTCATCCACATCAGATTTTACCTGACACATTATTTATTATTTAATTTTTTAAAAAAGTTAATTTTTTCTTCTTTTTCACTCCATTACTCCATAGTTACTTGAGCAACTTCTAGAATTCTTTCTTCCATTGATATCAATGAATCACCATTACAATACCTTAATATATCTTAGTATTTGCACATAATTTCACAATATACTTTATCTAATTTCCCAAAGATATTCAACAATTACTTTCACCATTACCCTATAAAAATGAAAAGAAAGATAAATAAAGAACAATTTTGATAACAAAAGAGGTCAAGATACTTATGTTTCTTCCGACAACTGTGTATCGCAACAATTTTTTGAATTTTCCTTTGTTTATTATGTTCAATGTTTTTGCACAATTTCGTTTTAATTTAGGGGAAAGAGAAAAAGAAATTGGAAAGGAGCGGAGAAAGGGAGAAAGAGCGAATGGGGGTATGGGTATAGGATAGGGAAACTGAAGTAATGGTAGAAGAGGAAAAGAAACGGGGATGGGTGGGGGATAGGAGAAAGAATGATATATTTATTTTAATAATTGTCTTCTGTTTATTCTATTTGTTCTTTAAACTATTTTTAGTCTAAATTCTAGTGTCTACGCTCTTTTTGGCGTGGAATCTTGTATTTATTCTAACTCATTAATCAAGTTACCACATAAGCACGGTCAACGGTTGAAGGGATTTAAAATGTTAAATTTCATTGAGTTAGAGAGTTCAATTGACAAAGTTCTAAGTTCAAAGGTTCAAAATACAAATGCATACAAGTACGAGAGGACCGTTTCGCCTTTTGTGCAGTGTTTTTGTTTTCCTTGACCTTCGTAATGCAAATATCAATTCAAAATTTGTTTCCAAAGGACTAATACATATCTTACTTATAATAACATAAATATGTGTTTTAAAGATGCTTCTAACATGGAGCAACGAAGTAGATCTCAGATGAATTCATTGTTTTTGTTTATCCTGAACTTCCCAAGATCTTTATATGATTTGAATTCTAGAGCCTTCAAATGACCTCTGTGGAATGTAAGGCGAGATTTTCAGTTGGCACTTATTATTTACTCCTATTTAAAAAAGAATTGTGAGAAATATGGGGAAAAAATAATATTGAATTGTTGTTTTTTACATTATCACGTTGAGAACCTATTTATAGACCTTAAAATACAATCCTTTACCAAGTAGGATACCATTTAGTATTTCTATTCCTATTCTAATAGGATTGTATAAACCTAAACATATTCCTATTCCAATAGGATTGTATAAACATATTCCTATTCTAACACTCCTCCTAAAGTTAGTGCGTGCAATTCATGTGTACCTAGCTTGTTACAAATGTAATTAACATGGTGACCGATGAGGGGCTTGATGAGATATTTGCGAACTTCACAAAATTGACGGTCATTCTCAATGTGCATGTCTTCTCATTAAATATTGGATTTGATGCATAATGTCAGTCAATCTCAGTGTGCTTAATCTTCGCATGAAATACTGAATTTGATGAATATTTGATGCATAATGTTGGTGTTGAACTTTCCAAACCAAGCTTGAGAAATATTGTTCTAGACCATGGAGTGATTTGCACAATCGACATGCAAGTCTACTGAACTCCCCTGAGCAACAAAGTGCTCAAAACCTAGTATATGTATATGGATCTTGTCGGAATCAATAGATGAGTCGATATTAAACAAGTCACAGAAAAACTGGTTGGAACATATGATCATATGTCAGAGTATTAAATTTGATGGCTAAAAGTGGTCACAATCTTAGGAATAAAATTATATAGGTAGGGTCGGAATGATGTCACGACCCAACTAGAAAATAGAAATTAAATATGATAGTTTGAATTGATGGAGCAACCCCGTTGAAAAAGAGAAGTAACATGGCACAACCTTAATGAAAAAGAAAAATTATATAGGTTGGATTGAAATGATCGCATAACCTACGCAAATCAAATTTGAGGAGTCACTGGAAAGACGAATGGAACTATGCAAATCGAATATGAGTCATTGAAAAGACACATGATGCTATGCAACTCAGATATGAGAAAATAGTCGGTAAAAATCACGGTACTATACAAATTAAATATGAAAAGTAGTCTGAAGAGATGCACGGTGCTACGCAAATCAGATATGCGATAAAAAGGTAGTCACCGAGAGGATGGTACTGTGCTACACAAATTATATATGAATAAGCAGCCACTATAATGATGGCACAGTGCTACACAAATTAAATATGAAAAAATGCTCATCATAATGATGGCACGGTGCTACAAAAATTAAATATGAAAAACTAGTCACTAAAATGATGGCACGGTGCTACACAAATTAGATACAAAAAAGTAGTCATTGGAATGATGACACGGTGCTACACAAATTAGATATGAGAAAATAATCACCACAAAGATACACGGTGACCCAACTTTTGCTAATATAATCATTAGCCAGAGGGGTGGGCCACCGGCAGTGGAAACTCTTTGATTTTCTACCAAGATCGTAGAAGCTCTGATACCATGTGAGAAATATATTGAATTATTGTTGTTCTTTTACATTATTACATTTGTGAGAAATATAGGAAAAAGATATTATTGAATTGTTATGTCTACATAATAACATTGAGACCCTATTTATAGACCATAGAATACAATCCTTTATCAAGTAAGATACTATTTAGTATTCCTATTCTAATAGGATTGTAATAACCTATTCCTATTCCAATAGGATTGTATAAACCTATTCCTTTTCCAACACTCCCCCTCAAGCTAGTGCATACAATTCATGCACCTGAACTTGTTACAAATGTAATTATCACGAGAACTGCTGAGGGGCTTGGTGAGATATCTGCAAGTTGATCAATGGACTTCACAAAAAATTGACGATCAATCCTAATGTGCTTGTCTTCTCATTAAATACTGGATTTGATGCATAATATCAGTAAAAATAGAGATAAAATTCTAGTATTGAACTTCCCAAACCGAACCTGCAAAGACTGCTTTAGACCATAGAATGACTCACTTATACAAGTCTACTAAATTCCCTCCGAGTAACAAAGTGCTCAAAACCTTGTATAAAGTATATAGATCATGTTGGAATCAATTGATGAGTTGATATTAAAACAAGTTACCGATAAATTGGCTTGAACATGCTCATATATCATAGTATTAGATTTGATTGCTAAAAGTGGCCACAATCTAAGAAATAAAATTATATAGGCAGAGTCAGAATGATGTCACAACCGAACTAGAAAATAGAAATTAAATAGGATAGTTCGAATTGATGGAATGATCCCATTGAAAAAGAAAAATAATATGGGTAGGGTTGGAATGATGGCATAACCCTACGCAAATCAGATCTAAGGAGTCACCGGAAAGACGAATGGAACTATGCAAATCAAATCCGAGTCACTGAAAAGACACATGATGTTATGCAACTCAGATATGAGAAAATAGTTCGAAAAAATTCACGGTACTGCACAAATTAAATATGAAAAGTAGTTCAGGAGATGCACGGTGCTACGCAAATCAGATATGCAAAAAAAAACATAGTCATCCAAAAGATGGCACGGTGCTACACAAATTATATATGAAAAAGTAGTACTTGAATGATGACACAGTGGTACACAAACTAAATATGAAAAGTAGTCACCGAAATGATAGCACGGTGCTACACAAATTAAATATGAAAAAGTAGTCACCGGAATGATGGCACGGTGCTACACAAATTAAATATGACAAAAGTAGTCACCGAAATGATGGCATGGTGCTACACAAATTAAATATGAAAAAAGTAGTCACTGGAATGATAGTGCGGTGTTACACAAATTAGATGTGAAAAAATAGTCACCAGAAAGATACACAGTGACTCAATTTTTATTTTTTTTGCTAACATAATCATTGGCCGGAGGAGCGGCATATGAGTAATAGCCGCCCGCCGGCAGCGGAAGCTCTTTGATTTTCCACCAAGATTGTAGGGGCTCTGAAACCATGTTAGAAATATAGGGAAAAATATTATTGAATTGTTGTTGTGTCTACATAATAACATAAAGACCCTATTTATAGACCATAGAATACAATCCTTTATCAAGTGGGATACTATTATCCTACTTAGTATTCCTATTCCTATTCTAATAGGATTGTATTAATCTATTTCTATTCCAATAGGATCGTATAAACCTATTCCTATTCTAACAACATTGAGACCCTATTTATAGATCCAATCCTTTACCAAGAAGGATACTATTTAGTAATCATATTCCTATTTTATAGAATTGTATAAACCTATTCCCATTCTAATAGGATTGTATAAACCTATTCCTATTCCAATAGGATTGTATAAACCTATTTCAATTCTAACAAGAATGACCCAATTTCTTTTTTAGTTTGTTTAAAAGAGAATGACACCTTTCCTTTTTTAGCAACACTTTAACTTCAACTTTCCACATGGCATGTTTAAGGCCACAAGATTAAAGGACATTTTTGGTACATTTTACATAATTTTAATTAAGAACCACAAAATTAAAAAGTCTTCTTACTTTTCTTAAACTCCGTTCCAAGTCAAAGTAGACCATTCTTTTTTAAACAAAGGGAGTAATTTTTTTGGGGTTGGGAAACGAGTGTGAGCATTAGGATTTATTTTGTAGATTTGAGTTTGTGCTAGGGCTTGTTTGTGATTTTGGTTTGGATTGTTTTCTGTTAAAAAATATTTGAAAACACCCAATCACTTTTTGAAACTCTAACGTGGGTTAAATAAATAGGTTAAAACTGGCTAAACACTATTTGTTATTCCTAATCGTGTTGGACTCCGAACTATTAAAAAGGAGCCTCTGACAGGCAAGGCCTTGCGTCACAGATGTTCGCGTAGAACAAAATGAGCTCCCTTTGTTATGGGAGAACAATGCAAAACCACGTTTCTAGCTTCTTTTGGTTGCAAAACCATATAGGCCAATGCTAACTAGTAAATGTCATACATATTTGTTTCTTGATTGGAGTGTAGTATTTCTTATTATAATGTGTTTGTTGCTTCTAAGGAGGACAATTCTTGCAGTTTGAACGTAGTCTCCTTATTTTTGCTTACCGAATCTTCTTTTGCTTTCCTTTAAATGGATTTTGCAATAATTTTCAAAAATTTTGTCAATTTTTCATAGATCTAGATGCTACATCAATCTTCTTGGAGTCTTGTTATCTTAAAGAGATCGTGATATCCAGCTGCATATTGATTTTTGATTTCTGACCAAGTATTTTAAAAGGATATGGTTCTTTGTTGTTTCTCTCTGATTTCTTGAAGTTTCTAATAGAAAATTTATTGCATACAGTGGTAGTCCTTATTAAGAAGTTTGTGATATTTTTGTTCCTGCACCACGAGAAGAATATTTGTCACGGGATGTATATTTTTCTCATAAGTATCAATTTTGGGTTGTACTAGCCCCAGAGCTTTGGTCAGTGATGATGACTCAAAACGGGATGTGAAGGGAATATGTCACAAGTTTGAAACCTATCATCGACAATGAGCTTGATATATAAGTGAGATCAGGGTAGAGAGGTGCCTCCAATTCTTAGAAGTTTCAAACTTGTAGGTCAATCAAAGCAGTCTAATTCACAAGATAATTTTATGTTATTTGAACAAAAATTGAGCCCTAATATGACTGAGACAAGTATTAGAGAAGGAAGGGACCCCAATCCTGCCATAAGGAATATGAATGTTGAAGAGAATAAGCTTATGGTGGCTGGTTGGTTCTTCATGTTACTTGTAGGATTGGGGCCGTCCTTCTCTTTATTGAGGATACTGTCGTGAGGAAGTAACTCTTGGTGAGAGCAATTGTACCCGACATTTTTATGCAACATAACTTGGGATTCATTGTAAATTTGGCTTTGTTTTCTCCACATTCCCTTCCCTGTAAGATGTAGCACCCCACTGCCTCCCTAGAAGAGGAGGGTGGGGGGAAGGAAACAAATTGTAGAAGGTTGGTTAGTGGAAGAGACAGTTAATTATGTATTTCAGTGTTATGTCCATCGTGTAGTTGTATAACTTACTTTTCTCTTAAGCTACTTTAAGAAAACCTAGATAAGATTTTAGTTTTGGAAATATCTTCCTCATCTATTGCTATTCCATTCCCTGCTGCTCTTTTTTGATTTACCTGTGAGTTATGTGATCAGGAAAAAGAGGTTCAGGCTTAGAGTTGCAAAGCTTCACTTTCTTCCCTGCAGCCAAAGAAACTTACTGGAGAGTGCATTCAGTAGAGAGATTCAATCTTCACAGAATATTCTGTGCAGAAGTGCTTCTGAAAAGCATGATCCGGAGTCCAGATTCCTCTGTCAGAGCAAAAGTTCAAGTCGATCAATTGGCTCTCCTGCTCATTGCACAGCTGGCGTGAACTGGAAATCCAAAAGCTCTGCGCAACCCCTTTCATCTAATATTTTACCTAGAGAGGATGATTTCCTGGATAACAAATTCAGTGCTTCAGTTAGATCCAACTATAAATCTGACTGTGAGGCAGGTTCAGGATGGGAGGATATGATTTTCAAACAATTGTAGCTGGCAGTTCTAGAGAGGATGCTTATTTAGGGTATCACTTGAACTTGATGACAGTTCAAATGTGATGCATGAGAGAAGGAAAACATTTATTTGGAGCTGTTCTTAATTTGCACAGAAGCCTGAAACGTGATGGATCATCTCTTGATTGTGA</genome_strand>
        <mrna_strand>TCCGTCTTTGATACACCAGCTAACTTGAGGACGATTCAG...........................................................................................TGGGTATTCCTCCAAGTTCCCTTAACAAATTCAATTCAAGCATAGGGGCATTCAAGCTTTCAGGATACATCTCAG..............................................................................................................................................................................................................................................GTATCAATTCAAGATTTGTTTCCAAAAAGGACCAGTACAAGAATCACTTAATAACATAGCTATGAGTTTGGACAGTGCTTCTGACATTGAGCAGCGAAGTAGATATATTCACTGTTTCTGTTGAACCTAAACTACCCAAGATAAATTTGTTTTGATCCGACTT.........................................................................................................................................................................................................................................................TGTGGAACCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATATGCATGCTTTCCCTGCAAGCTTTGGCCTTAAAGGAGAGGCTCTGGGCTCCACTTCTGATGTTTCTTTGTTGGAAATTGTTACTAAAAGTCACGGGAGGCCAGATGGATATCGTAATTTTTTGAAG........................................................................................GGCAGATTTTGTAGACAAGATGTTGGTGCAACAGGGAATTAATGTATAAGCCTATCTCACACAGGAGTTGATTTTTGTTTGCTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATAACGGCCCAAATTGATGGATAAAAGATGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U562898" ref_strand="+" ref_description="SGN-U562898 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|163889367|gb|ABY48137.1| (e_value=3e-52) putative; (*ATH) AT4G37920.1 (e_value=5e-51) | Symbol: None | similar to expressed protein [Arabidopsis thaliana] (TAIR:At1g36320.1); similar to P0552C05.25 [Oryza sativa (japonica cultivar-group)] (GB:NP_914200.1) | chr4:17828456-17830311 REVERSE | Aliases: F20D10.40, F20D10_40; ">
      <seq>tggagcaagcatagtgaagaataatgagccgtctccactgcttggagacatcgatcttcgccaccgcaaatctctctctttttcacacacccttttcaccatctgcagttttacccataacttctaccaaacctgcgagccttctttttgagaatttcaagaaatcagcatcaagaacaccaactagaacaagtgccaacaaccccacaactaaggtgttggctagtggtgtatctactgcggcagtagatggagaagctgatgttgaagttgcagagggttatacaattactcagttttgtgataaaatgattgatttgttcctaaatgaaaaacccaagtcaaaagattggagaaaatacttggtttttcgagaagagtggaagaagtacggggatagattttacagtaggtgtcgaactcgagctgacacagaagatgattctcaaatgaaggaaaagttaattagcttggctagaaaagttaggaagattgatgatgaaatggaaaggcatactgaacttctcaaagagatacaagataaccccagggatttgaatgcaattgttacaaagaggcgcaaggacttcaatggtgaattctttcggcatctgtctttgctttcagaaacttataacagcttggnngancgagatgcatttgccanacttggnnctagatgcttgtctgcagtcagtgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0073P13.2" temp_strand="+" temp_description="C02HBa0073P13.2  AC215377.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0073P13 sequenced_by:kribb upload_account_name:korea">
        <position start="126210" stop="129068"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126508" g_stop="126720" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="213" r_length="213" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="126721" i_stop="126809" i_length="89">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126810" g_stop="127087" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="491" r_length="278" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="127088" i_stop="127214" i_length="127">
            <donor d_prob="0.768" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="127215" g_stop="127380" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="657" r_length="166" r_score="0.982"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127381" i_stop="128724" i_length="1344">
            <donor d_prob="0.174" d_score="0.94"/>
            <acceptor a_prob="0.986" a_score="0.93"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128725" g_stop="128768" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="658" r_stop="701" r_length="44" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0073P13.2" gen_strand="+" ref_id="SGN-U562898" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>701</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0073P13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U562898" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126508" e_stop="126720"/>
          <exon e_start="126810" e_stop="127087"/>
          <exon e_start="127215" e_stop="127380"/>
          <exon e_start="128725" e_stop="128768"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGCAAGCATAGTGAAGAATAATGAGCCGTCTCCACTGCTTGGAGACATCGATCTTCGCCACCGCAAATCTCTCTCTTTTTCACACACCCTTTTCACCATCTGCAGTTTTACCCATAACTTCTACCAAACCTGCGAGCCTTCTTTTTGAGAATTTCAAGAAATCAGCATCAAGAACACCAACTAGAACAAGTGCCAACAACCCCACAACTAGTAACTACTTCGTTGTCTTTTCTAGTATTGCTCTCTTCTTTTTCTTCAATTTTCTTGATTGATAAATATTTTGTATGGTTCTTGTTTAGAGGTGTTGGCTAGTGGTGTATCTACTGCGGCAGTAGATGGAGAAGCTGATGTTGAAGTTGCAGAGGGTTATACAATTACTCAGTTTTGTGATAAAATGATTGATTTGTTCCTAAATGAAAAACCCAAGTCAAAAGATTGGAGAAAATACTTGGTTTTTCGAGAAGAGTGGAAGAAGTACGGGGATAGATTTTACAGTAGGTGTCGAACTCGAGCTGACACAGAAGATGATTCTCAAATGAAGGAAAAGTTAATTAGCTTGGCTAGAAAAGTTAGGAAGGTATAGTGAATTTCTTTTAATGCATATTTTGGTTTAAGGTTGAAAATGAGAAGTCTGTTTTACTTTGACAAGGCTTTACTTTTAGATATTCCCAAATTGTTCTTGATCAGGAATGAGGTCATTGCAGATTGATGATGAAATGGAAAGGCATACTGAACTTCTCAAAGAGATACAAGATAACCCCAGGGATTTGAATGCAATTGTTACAAAGAGGCGCAAGGACTTCAATGGTGAATTCTTTCGGCATCTGTCTTTGCTTTCAGAAACTTATAACAGCTTGGAGGACCGAGATGGTAAAGTGGCTTTGCTCATGGATTGTTCTTTTAGGTTTGATGGTTCTAGTTATGGGTTGTTGTTGTTGTGAGAGGAAGAGAACCAAAACTGTTCTGCAGCATGTTTTAGTTTCAACTTTTCTTCTGGGAAATAAAACAAACTATGGCATACGAGTTCAAACTAAACTAGCTGGGGTTGCAAAGGATTATTGTTATAAGCTTCTGCATTATTAAAAGACCATTGCAAGGCTGCTTAAGCCCTGAGTCTCAGTGCAAGTCGACTGGTCATTTTGTCTCGCCTATGTGGTGCTTTGGTGCTAGCAATAAGTCATTAAAGTGTGTGCCTCAGTGCCAATGGGCTTTGTTCTAAAGAAGGAAACCTTAAAGATAAATATAGCTAGATATATAATATATCAATTGTTAAGGGAACATTATGGATGAATATGCCATTGCATAGATATTGACCAGCCTAAAGTTTAGAAGCTTAAACTTGTGTCTTTGCATTTGAAATACAAGTTTAAAATAGTCTTTGAACTTAACTGACACCATTCTACTTTATATATTTCTTTCAATTGTAGTTACTTCACTTTCTTGGACTTTCCATTACATATGCTGTTAATGGTTTTCCTCATTTGTGCCTTTCTTCACTAAGGCGTTCACTTTAATTGTGATTTGTGGTTTACGTCCCAAGAGAAACTTCCAGTGTTTCTGGTTTTTAGTCTTTGACAACACTGATCAGCCTCTCACTAGTCCTTTTTTCTTTAGTCTTATGCCGAAGCCGTGTTTGTTCTAGGAAGTACTTTATGGGCATGCCATTTTTTTTATTTGATAAAGAGCATGTCATTTGTTTGACCATAATCGATCTCTGTGATTGAAAAATTGTGATGTTTCAGTAGGGCTTTTTGTTGCTTATAGTAACTAGTCCCTGACTGACGATAGCTGTTCTACAAAAGATTATCTTGTCTAAGATAGTCTTAATTTCACCAGTATCCATTAAATGCTTCCTTATTCATAATCAAGATTAGATATCTCAAAGCTGAACCCTGTAAACTAAAGTCAATCAGAATGTTTAGGATAGCAACTCCATCGCTCCCTTTAACTAATTTATGCAACATAAAAGGCATGAGCCTTTCTTTTTGTCTTTTCATCTTTCAATAATGAAGTGTGATTTGTGTACTACTTTCTTATCCAAATAATCCAACTATTGGGTTCAATCATGAATCAGATTTACACGATGTTTTAAATGATCTTTGATGCATATCTCAATGGATGGAGAAATGAATATTTGAAAAGAAAACCGGAAAGCAACTAGAAATTGAGTGCTGATGTCATCTTGCCATTCTCTGTGGTTTTTTGATTGAGCAGCATTTGCCAGACTTGGGACTAGATGCTTGTCTGCAGTCAGTGCT</genome_strand>
        <mrna_strand>TGGAGCAAGCATAGTGAAGAATAATGAGCCGTCTCCACTGCTTGGAGACATCGATCTTCGCCACCGCAAATCTCTCTCTTTTTCACACACCCTTTTCACCATCTGCAGTTTTACCCATAACTTCTACCAAACCTGCGAGCCTTCTTTTTGAGAATTTCAAGAAATCAGCATCAAGAACACCAACTAGAACAAGTGCCAACAACCCCACAACTA.........................................................................................AGGTGTTGGCTAGTGGTGTATCTACTGCGGCAGTAGATGGAGAAGCTGATGTTGAAGTTGCAGAGGGTTATACAATTACTCAGTTTTGTGATAAAATGATTGATTTGTTCCTAAATGAAAAACCCAAGTCAAAAGATTGGAGAAAATACTTGGTTTTTCGAGAAGAGTGGAAGAAGTACGGGGATAGATTTTACAGTAGGTGTCGAACTCGAGCTGACACAGAAGATGATTCTCAAATGAAGGAAAAGTTAATTAGCTTGGCTAGAAAAGTTAGGAAG...............................................................................................................................ATTGATGATGAAATGGAAAGGCATACTGAACTTCTCAAAGAGATACAAGATAACCCCAGGGATTTGAATGCAATTGTTACAAAGAGGCGCAAGGACTTCAATGGTGAATTCTTTCGGCATCTGTCTTTGCTTTCAGAAACTTATAACAGCTTGGNNGANCGAGATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTGCCANACTTGGNNCTAGATGCTTGTCTGCAGTCAGTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U598856" ref_strand="+" ref_description="SGN-U598856 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157330149|emb|CAO44605.1| (e_value=2e-78) unnamed; (*ATH) AT4G37920.1 (e_value=7e-80) | Symbol: None | similar to expressed protein [Arabidopsis thaliana] (TAIR:At1g36320.1); similar to P0552C05.25 [Oryza sativa (japonica cultivar-group)] (GB:NP_914200.1) | chr4:17828456-17830311 REVERSE | Aliases: F20D10.40, F20D10_40; ">
      <seq>gacaacacactggagattgtgggaacattagatactgcccaggccaaattcgatgacatcttgaactctatgtcagtggatgcagcatgtgacaagattaaaagccttgccaagagtaaagaacttgactcttctttggtgctgctgataaatggtgcttgggcttcagcaaaagaatcctctacaatgagaaatgaggtaaaggagataatgcatcgtctatacaaagctacacagagtagtctaaggagcatggcaccaaaagaaataaagttgctcaagtacctgctgaacatcacagatcctgaagagcgattctcagcattggcaacagctttcagccctggtcatgaacatgatgccaaggatcctaatgctatatacacaagtccaaaagagttgcacaagtggatcaaaatcatgcttgatgcatacaacatgaataaagaagagactgaaattagagaagcgaagcagttggatcaacctatggtcattcagagactttccattctgaaggagacagttgaagcagaatatttggaaaaagaagctaatacagaaaaagattcacaaccagaagaaactgtgatatgacaacccagtcccccggcgtatcntgttgttatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0073P13-KF91y/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0073P13.2" temp_strand="+" temp_description="C02HBa0073P13.2  AC215377.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0073P13 sequenced_by:kribb upload_account_name:korea">
        <position start="128472" stop="131009"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="128772" g_stop="128969" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="198" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="128970" i_stop="130308" i_length="1339">
            <donor d_prob="0.601" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="130309" g_stop="130496" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="386" r_length="188" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="130497" i_stop="130572" i_length="76">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130573" g_stop="130817" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="632" r_length="246" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0073P13.2" gen_strand="+" ref_id="SGN-U598856" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>631</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0073P13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U598856" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="128772" e_stop="128969"/>
          <exon e_start="130309" e_stop="130496"/>
          <exon e_start="130573" e_stop="130817"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACAACACACTGGAGATTGTGGGAACATTAGATACTGCCCAGGCCAAATTCGATGACATCTTGAACTCTATGTCAGTGGATGCAGCATGTGACAAGATTAAAAGCCTTGCCAAGAGTAAAGAACTTGACTCTTCTTTGGTGCTGCTGATAAATGGTGCTTGGGCTTCAGCAAAAGAATCCTCTACAATGAGAAATGAGGTACGGACATTTGTGGTCCATTTGATTCACAAAGACACGAGCACAAAGATTTTTCCGTTGATCTATTTCTTGAAGAGAAATGCTGATTTTCATCATATATGGATCTTGACTGATTTATTATCCTAACCATTTTATGGTATGATTATATTCGGTTTAAACACTAGGAGATTCTTGAATTGCTTTTTCTGTCATTGTGATGTTAAATAAGTAGCTTCAGATCATGGTCTTTGATATTGGAACATATGAATTGGTGGATTTGTCCTTGTGGACTATAGGGGTGTTAATTTTTGTTATAAAAGCATAGCATATTCAAACTTAAGTTGGGTGGGTTGGGTTATAGGTCAGTTGGGTCACGTTATGTTTATTGACTCAAAGTCTTCTTTGACTCATCCAAGCCTGACAAAATCCAACCCATGTTTGACTCATGATATTGTTGATGATCCCAAACTTAAGTTGGACTATGACTAGTTTCTAAACCCGTTTTAATCCAAGCAAACATTGGATCCTGACGATGGATGTACAGTAGCTTATATTCTTATATGTTGAATAGTAATACTCAATTCTGTTTTGATTTATGACACACTTTCCATGTGCTATATTCCAAACATTTGACACCAATATGATGTGCGTGTCAAAATTCTATGCCAGTGACGCAGCATACTTCGTTGGGGAAGGTTTATGAGCACTTGTAGCTCATATACAAGAAAAAAATTTAGCAGTATAAACGTTGGAGGCGAAGAGTGTTGCTATATTGTCAAGAAAGTTTAGAACTTCATCCCCGAAGCTACTCATAATTGAAGGCCATTATATTTTTCTCAATTTTCTTAAATCCATGTCCTGATCTTTTTCTTCTTACAATTTTATTTGAAGGGGGCGGTAGGGAGGACTCAAATATAACTGTAAAACTGGAAGTTTCTTATTTGTAATGAAACGAATACACTGAACTCAACAACAACATACCCAATGTAACCTCACAAAGTGGGTCTAGAGAGGGTAGAGTATATGCTGACTTTACCTGGAAATGAAACAAAAAGAGTCGGATGAAATTATGTTGTAATTAACTTTTGTTCACCACGTTTGCACAAATAGTTTGCAGAGTCCTCTTATCATATTATCCTGGAAATGTTAGCAGTAGCTCTATTCTAGATGTTCTTCTGTTTTCCTCATTTTCTTTTAACTATATATGCCAATGTGACTTCAGTAGTTTAAATTTAAATCATATCTGTCCCAACTGTTGATTACGTTCTATCTTGTGCTCGAATTTCTCTCTCTGATGGAATCTTGTATTTAGTTGAAGTGCCAGATAGTTTATTGAGCTGATGCTGGCATATGGGTGTAGGTAAAGGAGATAATGCATCGTCTATACAAAGCTACACAGAGTAGTCTAAGGAGCATGGCACCAAAAGAAATAAAGTTGCTCAAGTACCTGCTGAACATCACAGATCCTGAAGAGCGATTCTCAGCATTGGCAACAGCTTTCAGCCCTGGTCATGAACATGATGCCAAGGATCCTAATGCTATATACACGTAAGAGCTTAGTGCTTTCGTGCATTTATTAAAAGACTCAAAAGTGAAATCTTATATGCTTTCTTGTGTGGAGCAGAAGTCCAAAAGAGTTGCACAAGTGGATCAAAATCATGCTTGATGCATACAACATGAATAAAGAAGAGACTGAAATTAGAGAAGCGAAGCAGTTGGATCAACCTATGGTCATTCAGAGACTTTCCATTCTGAAGGAGACAGTTGAAGCAGAATATTTGGAAAAAGAAGCTAATACAGAAAAAGATTCACAACCAGAAGAAACTGTGATATGACAACCCAGTCCACCGGCGTATC-TGTTGTTATGCT</genome_strand>
        <mrna_strand>GACAACACACTGGAGATTGTGGGAACATTAGATACTGCCCAGGCCAAATTCGATGACATCTTGAACTCTATGTCAGTGGATGCAGCATGTGACAAGATTAAAAGCCTTGCCAAGAGTAAAGAACTTGACTCTTCTTTGGTGCTGCTGATAAATGGTGCTTGGGCTTCAGCAAAAGAATCCTCTACAATGAGAAATGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAGGAGATAATGCATCGTCTATACAAAGCTACACAGAGTAGTCTAAGGAGCATGGCACCAAAAGAAATAAAGTTGCTCAAGTACCTGCTGAACATCACAGATCCTGAAGAGCGATTCTCAGCATTGGCAACAGCTTTCAGCCCTGGTCATGAACATGATGCCAAGGATCCTAATGCTATATACAC............................................................................AAGTCCAAAAGAGTTGCACAAGTGGATCAAAATCATGCTTGATGCATACAACATGAATAAAGAAGAGACTGAAATTAGAGAAGCGAAGCAGTTGGATCAACCTATGGTCATTCAGAGACTTTCCATTCTGAAGGAGACAGTTGAAGCAGAATATTTGGAAAAAGAAGCTAATACAGAAAAAGATTCACAACCAGAAGAAACTGTGATATGACAACCCAGTCCCCCGGCGTATCNTGTTGTTATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>21</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="2816" PGL_stop="2518"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="2816" e_stop="2518"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.923"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.923">
            <gDNA_exon_boundary e_start="2816" e_stop="2518" e_length="299"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2816" stop="2617"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588482" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2815" stop="2518"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588481" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAGAACGAAACACAATGCATTTAGATAACCAGAGGGAGTCTGAACTTACAATCAAGGAAAGAAGTAAGATCATGCCAGAAAACAATTCACAAAGTTCTTTATGTTATCTCACAAAAGAGAAACTATTCATATTTCCCCACCAAAATCAGGGACAAAATATATATACAAACAGCCTATTCTTCAATCAGATCACCACTTTTCTATCTACATGTTAAAGAGCTTATCAGTTGTCACCCTAGAATCTTAGAATGGAGGTGGGGGAAAAAGAACAAGGAGAAAAAAATAATCAAATTAATCG</gDNA_template>
            <first_frame> K  E  R  N  T  M  H  L  D  N  Q  R  E  S  E  L  T  I  K  E  R  S  K  I  M  P  E  N  N  S  Q  S  S  L  C  Y  L  T  K  E  K  L  F  I  F  P  H  Q  N  Q  G  Q  N  I  Y  T  N  S  L  F  F  N  Q  I  T  T  F  L  S  T  C  *  R  A  Y  Q  L  S  P  *  N  L  R  M  E  V  G  E  K  E  Q  G  E  K  N  N  Q  I  N   </first_frame>
            <second_frame>  K  N  E  T  Q  C  I  *  I  T  R  G  S  L  N  L  Q  S  R  K  E  V  R  S  C  Q  K  T  I  H  K  V  L  Y  V  I  S  Q  K  R  N  Y  S  Y  F  P  T  K  I  R  D  K  I  Y  I  Q  T  A  Y  S  S  I  R  S  P  L  F  Y  L  H  V  K  E  L  I  S  C  H  P  R  I  L  E  W  R  W  G  K  K  N  K  E  K  K  I  I  K  L  I  </second_frame>
            <third_frame>   R  T  K  H  N  A  F  R  *  P  E  G  V  *  T  Y  N  Q  G  K  K  *  D  H  A  R  K  Q  F  T  K  F  F  M  L  S  H  K  R  E  T  I  H  I  S  P  P  K  S  G  T  K  Y  I  Y  K  Q  P  I  L  Q  S  D  H  H  F  S  I  Y  M  L  K  S  L  S  V  V  T  L  E  S  *  N  G  G  G  G  K  R  T  R  R  K  K  *  S  N  *  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2791" stop="2519"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>273</number_coding_nucleotides>
                  <number_encoded_amino_acids>91</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ITRGSLNLQSRKEVRSCQKTIHKVLYVISQKRNYSYFPTKIRDKIYIQTAYSSIRSPLFYLHVKELISCHPRILEWRWGKKNKEKKIIKLI</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2816" stop="2601"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KERNTMHLDNQRESELTIKERSKIMPENNSQSSLCYLTKEKLFIFPHQNQGQNIYTNSLFFNQITTFLSTC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="4152" PGL_stop="3654"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="4152" e_stop="3654"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.958"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.958">
            <gDNA_exon_boundary e_start="4152" e_stop="3654" e_length="499"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4152" stop="3654"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U564395" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAAGTTGCCAAAAACAAAAACTCAGACCAACTTTGCCTACATTATAACCATCGCAAAAGAAAAAGGCAAAGAAGAAATCAAAGAATGGCTGAAGATCCACAAGACGTAGCCGATCGCGAACTAGTCTTCAAGCGTTTTGATTTAAATGGTGATGGGCAAATTTCTTCAGCAGAACTTGGAGAGGCCTTGAAGATGCTAGGCTCTGTAACCTCTGAAGAAGTCCAGTATATGATGGCTGAACTTGATACTGATGGGGATGGCTTCATTTCTTTTAAAGAATTCGAAGAATTTGCTCGAGCCAATAGAGGTTTGATCAAGGATGTTGCTAAAGTATTCTAGCTTTCTTGATGCACAAACTTAACCATTAGAAACCGATTTTAGGTGGTTTTTGCAGGTTCAAACTGAATCCATTGCTTTCAGCTCGAACTATGTATACGAATGCAACATATGTTTAAAATGTATACATATAATAAAATCATACTCATTTTGAAATCATCGA</gDNA_template>
            <first_frame> *  V  A  K  N  K  N  S  D  Q  L  C  L  H  Y  N  H  R  K  R  K  R  Q  R  R  N  Q  R  M  A  E  D  P  Q  D  V  A  D  R  E  L  V  F  K  R  F  D  L  N  G  D  G  Q  I  S  S  A  E  L  G  E  A  L  K  M  L  G  S  V  T  S  E  E  V  Q  Y  M  M  A  E  L  D  T  D  G  D  G  F  I  S  F  K  E  F  E  E  F  A  R  A  N  R  G  L  I  K  D  V  A  K  V  F  *  L  S  *  C  T  N  L  T  I  R  N  R  F  *  V  V  F  A  G  S  N  *  I  H  C  F  Q  L  E  L  C  I  R  M  Q  H  M  F  K  M  Y  T  Y  N  K  I  I  L  I  L  K  S  S  </first_frame>
            <second_frame>  K  L  P  K  T  K  T  Q  T  N  F  A  Y  I  I  T  I  A  K  E  K  G  K  E  E  I  K  E  W  L  K  I  H  K  T  *  P  I  A  N  *  S  S  S  V  L  I  *  M  V  M  G  K  F  L  Q  Q  N  L  E  R  P  *  R  C  *  A  L  *  P  L  K  K  S  S  I  *  W  L  N  L  I  L  M  G  M  A  S  F  L  L  K  N  S  K  N  L  L  E  P  I  E  V  *  S  R  M  L  L  K  Y  S  S  F  L  D  A  Q  T  *  P  L  E  T  D  F  R  W  F  L  Q  V  Q  T  E  S  I  A  F  S  S  N  Y  V  Y  E  C  N  I  C  L  K  C  I  H  I  I  K  S  Y  S  F  *  N  H  R </second_frame>
            <third_frame>   S  C  Q  K  Q  K  L  R  P  T  L  P  T  L  *  P  S  Q  K  K  K  A  K  K  K  S  K  N  G  *  R  S  T  R  R  S  R  S  R  T  S  L  Q  A  F  *  F  K  W  *  W  A  N  F  F  S  R  T  W  R  G  L  E  D  A  R  L  C  N  L  *  R  S  P  V  Y  D  G  *  T  *  Y  *  W  G  W  L  H  F  F  *  R  I  R  R  I  C  S  S  Q  *  R  F  D  Q  G  C  C  *  S  I  L  A  F  L  M  H  K  L  N  H  *  K  P  I  L  G  G  F  C  R  F  K  L  N  P  L  L  S  A  R  T  M  Y  T  N  A  T  Y  V  *  N  V  Y  I  *  *  N  H  T  H  F  E  I  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4149" stop="3814"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>333</number_coding_nucleotides>
                  <number_encoded_amino_acids>111</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VAKNKNSDQLCLHYNHRKRKRQRRNQRMAEDPQDVADRELVFKRFDLNGDGQISSAELGEALKMLGSVTSEEVQYMMAELDTDGDGFISFKEFEEFARANRGLIKDVAKVF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="9231" PGL_stop="4434"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="9231" e_stop="8716"/>
            <exon e_start="8592" e_stop="8381"/>
            <exon e_start="7552" e_stop="7340"/>
            <exon e_start="6811" e_stop="6614"/>
            <exon e_start="6471" e_stop="6334"/>
            <exon e_start="5610" e_stop="5494"/>
            <exon e_start="4805" e_stop="4434"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.894" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.928" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.941" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="9231" e_stop="8716" e_length="516"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.997">
            <gDNA_intron_boundary i_start="8715" i_stop="8593" i_length="123"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="8592" e_stop="8381" e_length="212"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="8380" i_stop="7553" i_length="828"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="7552" e_stop="7340" e_length="213"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.894">
            <gDNA_intron_boundary i_start="7339" i_stop="6812" i_length="528"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="6811" e_stop="6614" e_length="198"/>
          </exon>
          <intron i_serial="4" don_prob="0.986" acc_prob="0.987">
            <gDNA_intron_boundary i_start="6613" i_stop="6472" i_length="142"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="6471" e_stop="6334" e_length="138"/>
          </exon>
          <intron i_serial="5" don_prob="0.995" acc_prob="0.928">
            <gDNA_intron_boundary i_start="6333" i_stop="5611" i_length="723"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="5610" e_stop="5494" e_length="117"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="0.941">
            <gDNA_intron_boundary i_start="5493" i_stop="4806" i_length="688"/>
          </intron>
          <exon e_serial="7" e_score="0.997">
            <gDNA_exon_boundary e_start="4805" e_stop="4434" e_length="372"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9231" stop="8716"/>
              <exon start="8592" stop="8381"/>
              <exon start="7552" stop="7340"/>
              <exon start="6811" stop="6614"/>
              <exon start="6471" stop="6334"/>
              <exon start="5610" stop="5494"/>
              <exon start="4805" stop="4434"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570882" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8961" stop="8716"/>
              <exon start="8592" stop="8381"/>
              <exon start="7552" stop="7521"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596820" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGCACTAATAAGCAAGTGGGTAAATCATGATTTTTGTCTGACAAGTGACAGGGATAACTAGAGGTCGTCGTCGGCTAGTCTTTGGGCCATCCAACAAAACAAAACTTGTATGTTAGCCAATTTCGATTCATTGATTTCTCCGCTGCTACTATTTTCCCCAACAGAAAGAATTGCTTCAAAATTAGGGTTTATTGCCTGAAAATTACTAGTTTTACAACGATTGCTCCAATACCTTCTCCTAATTTCCATTTTAGTTGCTGAAATTTTGACGCCTGATGTAACTGTATTTTAGGTTTTAATTGTGAAATACGAGTTTCTCAGATCAGATCAGTTCCTCTGGTTTTTTTACTTTCTAATAAATGGCTCTTCATGCTACTGCTTTCTCCTTCACTGGAGTTTCTACTTCAAGTAAATCTTCCAGAAGCGCTTTGCTTTCAGTCTTTCCTCTTCCTAGAAGATGCACTGTCAAAGCAACTTCCCAGTATCCGCACAGCTTTCCTCGATGTAAAATCCAAG : GAAGAGCATTGCCAAGTGACAATGGGCTAGTGGAGAAGGATGAATCTTCTCTTGTTGTGTGCTTTGGAGAAATGCTCATTGATTTTGTTCCGACTACAAGTGGGCTTTCATTGGCTGAAGCTCCTGCATTTAAAAAGGCTCCTGGTGGTGCACCAGCTAATGTTGCTGTTGGTATTTCCCGTCTTGGTGGTTCATCAGCTTTCATTGGCAAG : GTTGGTGAAGACGAATTTGGTTACATGCTTGCTGAGATTTTGAAGGAGAACAATGTCAACAGTGATGGTATGCGATTTGATCCAGGTGCTCGCACTGCTTTAGCATTTGTAACACTGAGAAAGGATGGAGAACGTGAATTTATGTTCTATCGTAACCCAAGTGCTGATATGTTGCTTCAAGAGGATGAACTTGATTTAGAGTTGATCAGGAAG : GCAAAAGTTTTTCATTATGGTTCCATAAGTCTGATTACGGAGCCATGCAAATCAGCCCATATTGCAGCTGCAAAAGCTGCAAAGGATGCTGGTGTGATCTTATCCTATGATCCCAATTTGAGGCTTCCATTGTGGCCATCTGCAGAAAGTGCTAGAGAAGGAATCCTTAGCATATGGAATACTGCTGATATAATTAAG : ATAAGTGAAGAAGAGATTTCGTTTTTGACACAAGGAGAAGATCCTTATGATGATAATGTTGTCCGTAAGTTGTACCATCCAAACCTCAAGTTACTCCTCGTCACAGAAGGTCCAGAAGGTTGCCGATATTACACCAAG : GATTTCAGTGGACGAGTTAAGGGTATAAAGGTGGACGCTGTGGACACCACAGGTGCTGGAGATGCTTTTGTAGCCGGAATATTGTCACAGCTAGCATCTGATGTCTCTCTGCTTCAG : GATGAGGGCAAGCTTCGAGATGCCCTTAGTTTTGCTAATGCCTGTGGTGCATTGACCGTGATGGAGAGAGGAGCAATTCCAGCTTTGCCTACAAAAGAAGTAGTGTTGAACGCCTTGCTCAAGTCAGTTGCATAATATCCATCCGACCTATTAATCGGTTGCCATTTAAATGCACTTGCAAAAAGATCTCCATGTGCTCCTTGCATAGTTCTTGTAGGGTAAAAGAATATTGTATAACCACATTAGCCAATAATCGAGAATAATTTCTGATAAATATGTGGTAGTTCATAACCCACATTATTAAGCACATGTATTTATTCAAGATCAATGTTCAATTCTTTTGGGTAATGCATTGGTTTGATTCAGTCATTC</gDNA_template>
            <first_frame> S  T  N  K  Q  V  G  K  S  *  F  L  S  D  K  *  Q  G  *  L  E  V  V  V  G  *  S  L  G  H  P  T  K  Q  N  L  Y  V  S  Q  F  R  F  I  D  F  S  A  A  T  I  F  P  N  R  K  N  C  F  K  I  R  V  Y  C  L  K  I  T  S  F  T  T  I  A  P  I  P  S  P  N  F  H  F  S  C  *  N  F  D  A  *  C  N  C  I  L  G  F  N  C  E  I  R  V  S  Q  I  R  S  V  P  L  V  F  L  L  S  N  K  W  L  F  M  L  L  L  S  P  S  L  E  F  L  L  Q  V  N  L  P  E  A  L  C  F  Q  S  F  L  F  L  E  D  A  L  S  K  Q  L  P  S  I  R  T  A  F  L  D  V  K  S  K  :  E  E  H  C  Q  V  T  M  G  *  W  R  R  M  N  L  L  L  L  C  A  L  E  K  C  S  L  I  L  F  R  L  Q  V  G  F  H  W  L  K  L  L  H  L  K  R  L  L  V  V  H  Q  L  M  L  L  L  V  F  P  V  L  V  V  H  Q  L  S  L  A  R :   L  V  K  T  N  L  V  T  C  L  L  R  F  *  R  R  T  M  S  T  V  M  V  C  D  L  I  Q  V  L  A  L  L  *  H  L  *  H  *  E  R  M  E  N  V  N  L  C  S  I  V  T  Q  V  L  I  C  C  F  K  R  M  N  L  I  *  S  *  S  G  R :   Q  K  F  F  I  M  V  P  *  V  *  L  R  S  H  A  N  Q  P  I  L  Q  L  Q  K  L  Q  R  M  L  V  *  S  Y  P  M  I  P  I  *  G  F  H  C  G  H  L  Q  K  V  L  E  K  E  S  L  A  Y  G  I  L  L  I  *  L  R :   *  V  K  K  R  F  R  F  *  H  K  E  K  I  L  M  M  I  M  L  S  V  S  C  T  I  Q  T  S  S  Y  S  S  S  Q  K  V  Q  K  V  A  D  I  T  P  R :   I  S  V  D  E  L  R  V  *  R  W  T  L  W  T  P  Q  V  L  E  M  L  L  *  P  E  Y  C  H  S  *  H  L  M  S  L  C  F  R :   M  R  A  S  F  E  M  P  L  V  L  L  M  P  V  V  H  *  P  *  W  R  E  E  Q  F  Q  L  C  L  Q  K  K  *  C  *  T  P  C  S  S  Q  L  H  N  I  H  P  T  Y  *  S  V  A  I  *  M  H  L  Q  K  D  L  H  V  L  L  A  *  F  L  *  G  K  R  I  L  Y  N  H  I  S  Q  *  S  R  I  I  S  D  K  Y  V  V  V  H  N  P  H  Y  *  A  H  V  F  I  Q  D  Q  C  S  I  L  L  G  N  A  L  V  *  F  S  H   </first_frame>
            <second_frame>  A  L  I  S  K  W  V  N  H  D  F  C  L  T  S  D  R  D  N  *  R  S  S  S  A  S  L  W  A  I  Q  Q  N  K  T  C  M  L  A  N  F  D  S  L  I  S  P  L  L  L  F  S  P  T  E  R  I  A  S  K  L  G  F  I  A  *  K  L  L  V  L  Q  R  L  L  Q  Y  L  L  L  I  S  I  L  V  A  E  I  L  T  P  D  V  T  V  F  *  V  L  I  V  K  Y  E  F  L  R  S  D  Q  F  L  W  F  F  Y  F  L  I  N  G  S  S  C  Y  C  F  L  L  H  W  S  F  Y  F  K  *  I  F  Q  K  R  F  A  F  S  L  S  S  S  *  K  M  H  C  Q  S  N  F  P  V  S  A  Q  L  S  S  M  *  N  P  R :   K  S  I  A  K  *  Q  W  A  S  G  E  G  *  I  F  S  C  C  V  L  W  R  N  A  H  *  F  C  S  D  Y  K  W  A  F  I  G  *  S  S  C  I  *  K  G  S  W  W  C  T  S  *  C  C  C  W  Y  F  P  S  W  W  F  I  S  F  H  W  Q   : G  W  *  R  R  I  W  L  H  A  C  *  D  F  E  G  E  Q  C  Q  Q  *  W  Y  A  I  *  S  R  C  S  H  C  F  S  I  C  N  T  E  K  G  W  R  T  *  I  Y  V  L  S  *  P  K  C  *  Y  V  A  S  R  G  *  T  *  F  R  V  D  Q  E   : G  K  S  F  S  L  W  F  H  K  S  D  Y  G  A  M  Q  I  S  P  Y  C  S  C  K  S  C  K  G  C  W  C  D  L  I  L  *  S  Q  F  E  A  S  I  V  A  I  C  R  K  C  *  R  R  N  P  *  H  M  E  Y  C  *  Y  N  *   : D  K  *  R  R  D  F  V  F  D  T  R  R  R  S  L  *  *  *  C  C  P  *  V  V  P  S  K  P  Q  V  T  P  R  H  R  R  S  R  R  L  P  I  L  H  Q   : G  F  Q  W  T  S  *  G  Y  K  G  G  R  C  G  H  H  R  C  W  R  C  F  C  S  R  N  I  V  T  A  S  I  *  C  L  S  A  S   : G  *  G  Q  A  S  R  C  P  *  F  C  *  C  L  W  C  I  D  R  D  G  E  R  S  N  S  S  F  A  Y  K  R  S  S  V  E  R  L  A  Q  V  S  C  I  I  S  I  R  P  I  N  R  L  P  F  K  C  T  C  K  K  I  S  M  C  S  L  H  S  S  C  R  V  K  E  Y  C  I  T  T  L  A  N  N  R  E  *  F  L  I  N  M  W  *  F  I  T  H  I  I  K  H  M  Y  L  F  K  I  N  V  Q  F  F  W  V  M  H  W  F  D  S  V  I  </second_frame>
            <third_frame>   H  *  *  A  S  G  *  I  M  I  F  V  *  Q  V  T  G  I  T  R  G  R  R  R  L  V  F  G  P  S  N  K  T  K  L  V  C  *  P  I  S  I  H  *  F  L  R  C  Y  Y  F  P  Q  Q  K  E  L  L  Q  N  *  G  L  L  P  E  N  Y  *  F  Y  N  D  C  S  N  T  F  S  *  F  P  F  *  L  L  K  F  *  R  L  M  *  L  Y  F  R  F  *  L  *  N  T  S  F  S  D  Q  I  S  S  S  G  F  F  T  F  *  *  M  A  L  H  A  T  A  F  S  F  T  G  V  S  T  S  S  K  S  S  R  S  A  L  L  S  V  F  P  L  P  R  R  C  T  V  K  A  T  S  Q  Y  P  H  S  F  P  R  C  K  I  Q   : G  R  A  L  P  S  D  N  G  L  V  E  K  D  E  S  S  L  V  V  C  F  G  E  M  L  I  D  F  V  P  T  T  S  G  L  S  L  A  E  A  P  A  F  K  K  A  P  G  G  A  P  A  N  V  A  V  G  I  S  R  L  G  G  S  S  A  F  I  G  K  :  V  G  E  D  E  F  G  Y  M  L  A  E  I  L  K  E  N  N  V  N  S  D  G  M  R  F  D  P  G  A  R  T  A  L  A  F  V  T  L  R  K  D  G  E  R  E  F  M  F  Y  R  N  P  S  A  D  M  L  L  Q  E  D  E  L  D  L  E  L  I  R  K  :  A  K  V  F  H  Y  G  S  I  S  L  I  T  E  P  C  K  S  A  H  I  A  A  A  K  A  A  K  D  A  G  V  I  L  S  Y  D  P  N  L  R  L  P  L  W  P  S  A  E  S  A  R  E  G  I  L  S  I  W  N  T  A  D  I  I  K  :  I  S  E  E  E  I  S  F  L  T  Q  G  E  D  P  Y  D  D  N  V  V  R  K  L  Y  H  P  N  L  K  L  L  L  V  T  E  G  P  E  G  C  R  Y  Y  T  K  :  D  F  S  G  R  V  K  G  I  K  V  D  A  V  D  T  T  G  A  G  D  A  F  V  A  G  I  L  S  Q  L  A  S  D  V  S  L  L  Q  :  D  E  G  K  L  R  D  A  L  S  F  A  N  A  C  G  A  L  T  V  M  E  R  G  A  I  P  A  L  P  T  K  E  V  V  L  N  A  L  L  K  S  V  A  *  Y  P  S  D  L  L  I  G  C  H  L  N  A  L  A  K  R  S  P  C  A  P  C  I  V  L  V  G  *  K  N  I  V  *  P  H  *  P  I  I  E  N  N  F  *  *  I  C  G  S  S  *  P  T  L  L  S  T  C  I  Y  S  R  S  M  F  N  S  F  G  *  C  I  G  L  I  Q  S  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8872" stop="8716"/>
                    <exon start="8592" stop="8381"/>
                    <exon start="7552" stop="7340"/>
                    <exon start="6811" stop="6614"/>
                    <exon start="6471" stop="6334"/>
                    <exon start="5610" stop="5494"/>
                    <exon start="4805" stop="4671"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1167</number_coding_nucleotides>
                  <number_encoded_amino_acids>389</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MALHATAFSFTGVSTSSKSSRSALLSVFPLPRRCTVKATSQYPHSFPRCKIQGRALPSDNGLVEKDESSLVVCFGEMLIDFVPTTSGLSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFIGKVGEDEFGYMLAEILKENNVNSDGMRFDPGARTALAFVTLRKDGEREFMFYRNPSADMLLQEDELDLELIRKAKVFHYGSISLITEPCKSAHIAAAKAAKDAGVILSYDPNLRLPLWPSAESAREGILSIWNTADIIKISEEEISFLTQGEDPYDDNVVRKLYHPNLKLLLVTEGPEGCRYYTKDFSGRVKGIKVDAVDTTGAGDAFVAGILSQLASDVSLLQDEGKLRDALSFANACGALTVMERGAIPALPTKEVVLNALLKSVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="18011" PGL_stop="19401"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="18011" e_stop="19401"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="18011" e_stop="19401" e_length="1391"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18011" stop="19401"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566691" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAACAAAAAAAAAAGAAAACTCTTCCCCTTCCCCTTCCGCATCTTTTCCCTTCCATACTGTCTCCGCAAATGGCCAAAACTCCCAGCGACTCCAAACAGCCGGCAGTTTCATCGGCGGAGATGGACGGAGTCGAGAAGGTATTCAGGAAGTTTGACGCCAATGGCGACGGAAAAATCTCTCTATCGGAGCTTGGCGCGATTCTGAATGCACTTGGCAGTAAGACGTCGCCGGATGAGGTAAATAGAATAATGTTGGAAGTTGATACTGATGGGGATGGTTTTATTGACTTGAAAGAGTTTGCTGCTTTTTACTGTCCGCGAGGAGCGGACGGTGATAATAAGGAGCTTCGGGAGGCTTTCGACTTGTATGATAAGGACAAAAACGGCAAAATCACAGCGGCTGAATTGCATTCTGTTATGAAGAGCCTCGGAGAGAAGTGCTCGCTCAAGGATTGCCGTCGTATGATCAGCAAGGTGGATGTTGACGGCGATGGATGCGTTAACTTTGAGGAGTTTAAGAAGATGATGAGTAGGACGTGACTTTTCGGATCATAACTTATGGAATCAACGGTAGGTTTATTTGCAACCGATTTCGGAACTCTGTAGATACGCTTCTGTTTCTGCCATCGTTTTTGCTGTCAATCCACTCTAACTGTAGTTAGGTATGAAGAAATTCCGAATCAGCAAAAAACTTTATTATTATCCTATTTGATTTGGGATTATGATAATTCAAAAAAGGTAAGAATAATACTTTGCAAAAATAAAAATTAGTCTTAAGACATCTACTATTGAGTCACGCGCAATCCATCTCTGTTACTGCTCATTTTATCTACTACTTTTATTTGCTTTTTTGGTACTTTTGAGTGCTTTTGAAGAAATGCATTTTCAAAGGTGCTGATAGTGCCAAGACCACACGGAATTGTAATCGTGTTAATTGGGCAACGCGCTTGTAGCTTTCATATTGCTAGTGGTAAATATGTACTCCGCCTATGTCAGTTTTTATTTTTTCCTCCGAAACGCCGTTTTTCATTTATTAAAGGCGTTTTGCATTTAATACTACTTCCACCTGTTTTTCCACTTTTCCGTCAATATCTTAATCCATTTCCACGAAAATACTAAGATAGTACTTAATTATTAGGTTGTGGAGTCTGATTAATATATATAGTTATTTAAGAAGTTTAACAGGTGAAATTGCCAGGGGTTATGGAGTGTGGGAGCCCCCATCCGAAGGAGGGTTTGGGGCGCTGCCCCGACCTAAATTTTAGGCTGTAGTATTTTTTCTCTGTAACCAAAAGTATTCTGATTTATCAATATATATGTAATCAAAAGTATTCTGATTTATCAATATATATATTTCATCGCCGTGGAAGTTTACTCACAAATTGTTACC</gDNA_template>
            <first_frame> R  T  K  K  K  E  N  S  S  P  S  P  S  A  S  F  P  F  H  T  V  S  A  N  G  Q  N  S  Q  R  L  Q  T  A  G  S  F  I  G  G  D  G  R  S  R  E  G  I  Q  E  V  *  R  Q  W  R  R  K  N  L  S  I  G  A  W  R  D  S  E  C  T  W  Q  *  D  V  A  G  *  G  K  *  N  N  V  G  S  *  Y  *  W  G  W  F  Y  *  L  E  R  V  C  C  F  L  L  S  A  R  S  G  R  *  *  *  G  A  S  G  G  F  R  L  V  *  *  G  Q  K  R  Q  N  H  S  G  *  I  A  F  C  Y  E  E  P  R  R  E  V  L  A  Q  G  L  P  S  Y  D  Q  Q  G  G  C  *  R  R  W  M  R  *  L  *  G  V  *  E  D  D  E  *  D  V  T  F  R  I  I  T  Y  G  I  N  G  R  F  I  C  N  R  F  R  N  S  V  D  T  L  L  F  L  P  S  F  L  L  S  I  H  S  N  C  S  *  V  *  R  N  S  E  S  A  K  N  F  I  I  I  L  F  D  L  G  L  *  *  F  K  K  G  K  N  N  T  L  Q  K  *  K  L  V  L  R  H  L  L  L  S  H  A  Q  S  I  S  V  T  A  H  F  I  Y  Y  F  Y  L  L  F  W  Y  F  *  V  L  L  K  K  C  I  F  K  G  A  D  S  A  K  T  T  R  N  C  N  R  V  N  W  A  T  R  L  *  L  S  Y  C  *  W  *  I  C  T  P  P  M  S  V  F  I  F  S  S  E  T  P  F  F  I  Y  *  R  R  F  A  F  N  T  T  S  T  C  F  S  T  F  P  S  I  S  *  S  I  S  T  K  I  L  R  *  Y  L  I  I  R  L  W  S  L  I  N  I  Y  S  Y  L  R  S  L  T  G  E  I  A  R  G  Y  G  V  W  E  P  P  S  E  G  G  F  G  A  L  P  R  P  K  F  *  A  V  V  F  F  L  C  N  Q  K  Y  S  D  L  S  I  Y  M  *  S  K  V  F  *  F  I  N  I  Y  I  S  S  P  W  K  F  T  H  K  L  L   </first_frame>
            <second_frame>  E  Q  K  K  K  K  T  L  P  L  P  L  P  H  L  F  P  S  I  L  S  P  Q  M  A  K  T  P  S  D  S  K  Q  P  A  V  S  S  A  E  M  D  G  V  E  K  V  F  R  K  F  D  A  N  G  D  G  K  I  S  L  S  E  L  G  A  I  L  N  A  L  G  S  K  T  S  P  D  E  V  N  R  I  M  L  E  V  D  T  D  G  D  G  F  I  D  L  K  E  F  A  A  F  Y  C  P  R  G  A  D  G  D  N  K  E  L  R  E  A  F  D  L  Y  D  K  D  K  N  G  K  I  T  A  A  E  L  H  S  V  M  K  S  L  G  E  K  C  S  L  K  D  C  R  R  M  I  S  K  V  D  V  D  G  D  G  C  V  N  F  E  E  F  K  K  M  M  S  R  T  *  L  F  G  S  *  L  M  E  S  T  V  G  L  F  A  T  D  F  G  T  L  *  I  R  F  C  F  C  H  R  F  C  C  Q  S  T  L  T  V  V  R  Y  E  E  I  P  N  Q  Q  K  T  L  L  L  S  Y  L  I  W  D  Y  D  N  S  K  K  V  R  I  I  L  C  K  N  K  N  *  S  *  D  I  Y  Y  *  V  T  R  N  P  S  L  L  L  L  I  L  S  T  T  F  I  C  F  F  G  T  F  E  C  F  *  R  N  A  F  S  K  V  L  I  V  P  R  P  H  G  I  V  I  V  L  I  G  Q  R  A  C  S  F  H  I  A  S  G  K  Y  V  L  R  L  C  Q  F  L  F  F  P  P  K  R  R  F  S  F  I  K  G  V  L  H  L  I  L  L  P  P  V  F  P  L  F  R  Q  Y  L  N  P  F  P  R  K  Y  *  D  S  T  *  L  L  G  C  G  V  *  L  I  Y  I  V  I  *  E  V  *  Q  V  K  L  P  G  V  M  E  C  G  S  P  H  P  K  E  G  L  G  R  C  P  D  L  N  F  R  L  *  Y  F  F  S  V  T  K  S  I  L  I  Y  Q  Y  I  C  N  Q  K  Y  S  D  L  S  I  Y  I  F  H  R  R  G  S  L  L  T  N  C  Y  </second_frame>
            <third_frame>   N  K  K  K  R  K  L  F  P  F  P  F  R  I  F  S  L  P  Y  C  L  R  K  W  P  K  L  P  A  T  P  N  S  R  Q  F  H  R  R  R  W  T  E  S  R  R  Y  S  G  S  L  T  P  M  A  T  E  K  S  L  Y  R  S  L  A  R  F  *  M  H  L  A  V  R  R  R  R  M  R  *  I  E  *  C  W  K  L  I  L  M  G  M  V  L  L  T  *  K  S  L  L  L  F  T  V  R  E  E  R  T  V  I  I  R  S  F  G  R  L  S  T  C  M  I  R  T  K  T  A  K  S  Q  R  L  N  C  I  L  L  *  R  A  S  E  R  S  A  R  S  R  I  A  V  V  *  S  A  R  W  M  L  T  A  M  D  A  L  T  L  R  S  L  R  R  *  *  V  G  R  D  F  S  D  H  N  L  W  N  Q  R  *  V  Y  L  Q  P  I  S  E  L  C  R  Y  A  S  V  S  A  I  V  F  A  V  N  P  L  *  L  *  L  G  M  K  K  F  R  I  S  K  K  L  Y  Y  Y  P  I  *  F  G  I  M  I  I  Q  K  R  *  E  *  Y  F  A  K  I  K  I  S  L  K  T  S  T  I  E  S  R  A  I  H  L  C  Y  C  S  F  Y  L  L  L  L  F  A  F  L  V  L  L  S  A  F  E  E  M  H  F  Q  R  C  *  *  C  Q  D  H  T  E  L  *  S  C  *  L  G  N  A  L  V  A  F  I  L  L  V  V  N  M  Y  S  A  Y  V  S  F  Y  F  F  L  R  N  A  V  F  H  L  L  K  A  F  C  I  *  Y  Y  F  H  L  F  F  H  F  S  V  N  I  L  I  H  F  H  E  N  T  K  I  V  L  N  Y  *  V  V  E  S  D  *  Y  I  *  L  F  K  K  F  N  R  *  N  C  Q  G  L  W  S  V  G  A  P  I  R  R  R  V  W  G  A  A  P  T  *  I  L  G  C  S  I  F  S  L  *  P  K  V  F  *  F  I  N  I  Y  V  I  K  S  I  L  I  Y  Q  Y  I  Y  F  I  A  V  E  V  Y  S  Q  I  V  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18012" stop="18551"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>537</number_coding_nucleotides>
                  <number_encoded_amino_acids>179</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EQKKKKTLPLPLPHLFPSILSPQMAKTPSDSKQPAVSSAEMDGVEKVFRKFDANGDGKISLSELGAILNALGSKTSPDEVNRIMLEVDTDGDGFIDLKEFAAFYCPRGADGDNKELREAFDLYDKDKNGKITAAELHSVMKSLGEKCSLKDCRRMISKVDVDGDGCVNFEEFKKMMSRT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18885" stop="19130"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RNAFSKVLIVPRPHGIVIVLIGQRACSFHIASGKYVLRLCQFLFFPPKRRFSFIKGVLHLILLPPVFPLFRQYLNPFPRKY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="26373" PGL_stop="21386"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="26373" e_stop="25849"/>
            <exon e_start="25124" e_stop="24700"/>
            <exon e_start="24623" e_stop="24438"/>
            <exon e_start="24350" e_stop="24084"/>
            <exon e_start="21982" e_stop="21386"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="26373" e_stop="25849" e_length="525"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.935">
            <gDNA_intron_boundary i_start="25848" i_stop="25125" i_length="724"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="25124" e_stop="24700" e_length="425"/>
          </exon>
          <intron i_serial="2" don_prob="0.971" acc_prob="0.996">
            <gDNA_intron_boundary i_start="24699" i_stop="24624" i_length="76"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="24623" e_stop="24438" e_length="186"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.997">
            <gDNA_intron_boundary i_start="24437" i_stop="24351" i_length="87"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="24350" e_stop="24084" e_length="267"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.991">
            <gDNA_intron_boundary i_start="24083" i_stop="21983" i_length="2101"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="21982" e_stop="21386" e_length="597"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26373" stop="25849"/>
              <exon start="25124" stop="24700"/>
              <exon start="24623" stop="24438"/>
              <exon start="24350" stop="24084"/>
              <exon start="21982" stop="21386"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573852" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATACGTGTGCAAGAGAGAGACCACCGGAGCACCAAACGCCACCCAACAACCACCCATTCAATTCTTCTAGAAAAGAACATCTTCCTCAAAATTATCGATGAAGGATCGCTCCTCAGTAATTGTTCGTTGATCCTACAAATTCAATCACGGCTCTTCTTGAATCTTTCGTTTGTATTCTCACAATTCATCATCACCGCAAAGTGTTGACCCTTAATCCAACTCTTCTGGTGGACGATAAGCACCGGACCCCTTCCCCTCACGGAGGTAGGGGTGCCTCACCCGCTGAAGGCGGTTGCCCCTCCGATCTCCTCTTCCTCGCCGGCGGCGGTCCAATTCTTCCTTTCTCTTTTTCCTTCTCCTAATTTTTCGTATAAGAGTTGTATTTTTGATTATCCATCCAAGAACAGGACCGATGTTGACTGTAAAGAGGGTGCCTACACTGGTTTCCAACTATCAAGAGGATGTTCTCGAAGGTAACGTCATGGGTTGTGGCCGCAAGTGCCTCGGAAAATGCTGCATGCCTG : TTTCAGTACTTCCTCTATATGCATTCAAGAATGATGATAATGAGCCAATTGAAAATGATGTTCAAACCTTGCCTGAGGAGGAGTGTCAGATGTCATTCTTGAACGATTTGTTGTTGGGCTTATGGGAGGAGCGGATGAGCCAGGGACTATTTCGATATGATGTGACAACCTGTGAGACGAAGGTCATTCCTGGGAGATGTGGTTTTATTGCGCAACTGAATGAGGGGCGCCACCTAAAGAAGCGCCCAACAGAGTTTTGCATTGATAAGGTTCTTCAGCCTTTTGACGAGAACAAATTCAACTTTACCAAAGTGGGCCAGGAAGAAGTGCTTTTCAGGTTTGAACCAAGTACCGACTACAAGGCCCATTACTTTTCCGGCATGCGAGTAAACAGTGGTATTTCACCTAGTATTGTTGCTATCAAT : GTGAGCCCAATTGAGTATGGGCACGTTCTTTTGATACCTCGAGTTCTTGATTGCTTACCTCAGAGAATTGATCGTGATAGTTTTGCAATTGCTCTCCATTTTGCCAGAGAAGTGGCAGATCCTTTCTTTAGGGTAGGTTATAACAGTTTGGGCGCTTTTGCTACCATTAACCACCTCCACTTCCAG : GCGTATTACTTGTCAGTGCCATTTCCAGTTGAGAAAGCACCAATACAGAAAATACTGGCAAGGAAGGGGCTGGGTGGTGCTGGAGTGATTGTATCTAAGTTATTAAATTACCCCGTACGAGGTTTTGCTTTTGAGGGAGGAAATGGAAGTACTGCCCGTGATTTGTCTGATGCTGTTGTGAATTCCTGCATTTCCCTTCAGAATAAAAACATCCCTTTCAACATTCTCATTGCTCAGTGTGGAAAGAAGATTTTTCTGCTTCCCCAG : TGTTATGCAGAGAAGCAAGCACTAGGAGTTGTAGACCAAGAGCTCCTGGACACTCAGGTGAACCCTGCTGTATGGGAAATTAGTGGACATATAGTGCTTAAGCGAACAAAGGATTACAATGATGCATCAGAGGAATATGCATGGAAACTTCTTTCTGAGGTTTCCATATCAGAGGAGAGATTTGAAGAAGTAAAGGGCTATATTTCTGAAGCAGCTGATCTACAAGCAGATGAGGATGAAAACATCAATCCAGAGAAGGAAATTCCAGATTCTCCTGGTCCGCAGGTGGCCTCACATATTCCTCCAGATTGTTTGGTGTTGCAGTGAAGAATTTGTGGCTTGCTCTTGCAAGATCTAATAAAAGTTTGAAGTATTATCTAGTGTATGGTTGAAATTTTGTGTGTTTGTTTTTCCAGCATCTTGTTTGATGCATACTGTTGTCTTGGTTGGAGGTTGTAATCCCCAAATAGTGTTAAACGTCATGGCTGCAAGCTGTGGTCTTTGGCAGGATTGTTTACAGTACCTTTTTTGTTGGTGTTTTGACTGTGCTAGCAAATGTTCCTAATAATAACACCAGTGTAGGACTAGCAAGTTTTG</gDNA_template>
            <first_frame> N  T  C  A  R  E  R  P  P  E  H  Q  T  P  P  N  N  H  P  F  N  S  S  R  K  E  H  L  P  Q  N  Y  R  *  R  I  A  P  Q  *  L  F  V  D  P  T  N  S  I  T  A  L  L  E  S  F  V  C  I  L  T  I  H  H  H  R  K  V  L  T  L  N  P  T  L  L  V  D  D  K  H  R  T  P  S  P  H  G  G  R  G  A  S  P  A  E  G  G  C  P  S  D  L  L  F  L  A  G  G  G  P  I  L  P  F  S  F  S  F  S  *  F  F  V  *  E  L  Y  F  *  L  S  I  Q  E  Q  D  R  C  *  L  *  R  G  C  L  H  W  F  P  T  I  K  R  M  F  S  K  V  T  S  W  V  V  A  A  S  A  S  E  N  A  A  C  L  :  F  Q  Y  F  L  Y  M  H  S  R  M  M  I  M  S  Q  L  K  M  M  F  K  P  C  L  R  R  S  V  R  C  H  S  *  T  I  C  C  W  A  Y  G  R  S  G  *  A  R  D  Y  F  D  M  M  *  Q  P  V  R  R  R  S  F  L  G  D  V  V  L  L  R  N  *  M  R  G  A  T  *  R  S  A  Q  Q  S  F  A  L  I  R  F  F  S  L  L  T  R  T  N  S  T  L  P  K  W  A  R  K  K  C  F  S  G  L  N  Q  V  P  T  T  R  P  I  T  F  P  A  C  E  *  T  V  V  F  H  L  V  L  L  L  S  M :   *  A  Q  L  S  M  G  T  F  F  *  Y  L  E  F  L  I  A  Y  L  R  E  L  I  V  I  V  L  Q  L  L  S  I  L  P  E  K  W  Q  I  L  S  L  G  *  V  I  T  V  W  A  L  L  L  P  L  T  T  S  T  S  R :   R  I  T  C  Q  C  H  F  Q  L  R  K  H  Q  Y  R  K  Y  W  Q  G  R  G  W  V  V  L  E  *  L  Y  L  S  Y  *  I  T  P  Y  E  V  L  L  L  R  E  E  M  E  V  L  P  V  I  C  L  M  L  L  *  I  P  A  F  P  F  R  I  K  T  S  L  S  T  F  S  L  L  S  V  E  R  R  F  F  C  F  P  S :   V  M  Q  R  S  K  H  *  E  L  *  T  K  S  S  W  T  L  R  *  T  L  L  Y  G  K  L  V  D  I  *  C  L  S  E  Q  R  I  T  M  M  H  Q  R  N  M  H  G  N  F  F  L  R  F  P  Y  Q  R  R  D  L  K  K  *  R  A  I  F  L  K  Q  L  I  Y  K  Q  M  R  M  K  T  S  I  Q  R  R  K  F  Q  I  L  L  V  R  R  W  P  H  I  F  L  Q  I  V  W  C  C  S  E  E  F  V  A  C  S  C  K  I  *  *  K  F  E  V  L  S  S  V  W  L  K  F  C  V  F  V  F  P  A  S  C  L  M  H  T  V  V  L  V  G  G  C  N  P  Q  I  V  L  N  V  M  A  A  S  C  G  L  W  Q  D  C  L  Q  Y  L  F  C  W  C  F  D  C  A  S  K  C  S  *  *  *  H  Q  C  R  T  S  K  F   </first_frame>
            <second_frame>  I  R  V  Q  E  R  D  H  R  S  T  K  R  H  P  T  T  T  H  S  I  L  L  E  K  N  I  F  L  K  I  I  D  E  G  S  L  L  S  N  C  S  L  I  L  Q  I  Q  S  R  L  F  L  N  L  S  F  V  F  S  Q  F  I  I  T  A  K  C  *  P  L  I  Q  L  F  W  W  T  I  S  T  G  P  L  P  L  T  E  V  G  V  P  H  P  L  K  A  V  A  P  P  I  S  S  S  S  P  A  A  V  Q  F  F  L  S  L  F  P  S  P  N  F  S  Y  K  S  C  I  F  D  Y  P  S  K  N  R  T  D  V  D  C  K  E  G  A  Y  T  G  F  Q  L  S  R  G  C  S  R  R  *  R  H  G  L  W  P  Q  V  P  R  K  M  L  H  A  C :   F  S  T  S  S  I  C  I  Q  E  *  *  *  *  A  N  *  K  *  C  S  N  L  A  *  G  G  V  S  D  V  I  L  E  R  F  V  V  G  L  M  G  G  A  D  E  P  G  T  I  S  I  *  C  D  N  L  *  D  E  G  H  S  W  E  M  W  F  Y  C  A  T  E  *  G  A  P  P  K  E  A  P  N  R  V  L  H  *  *  G  S  S  A  F  *  R  E  Q  I  Q  L  Y  Q  S  G  P  G  R  S  A  F  Q  V  *  T  K  Y  R  L  Q  G  P  L  L  F  R  H  A  S  K  Q  W  Y  F  T  *  Y  C  C  Y  Q   : C  E  P  N  *  V  W  A  R  S  F  D  T  S  S  S  *  L  L  T  S  E  N  *  S  *  *  F  C  N  C  S  P  F  C  Q  R  S  G  R  S  F  L  *  G  R  L  *  Q  F  G  R  F  C  Y  H  *  P  P  P  L  P   : G  V  L  L  V  S  A  I  S  S  *  E  S  T  N  T  E  N  T  G  K  E  G  A  G  W  C  W  S  D  C  I  *  V  I  K  L  P  R  T  R  F  C  F  *  G  R  K  W  K  Y  C  P  *  F  V  *  C  C  C  E  F  L  H  F  P  S  E  *  K  H  P  F  Q  H  S  H  C  S  V  W  K  E  D  F  S  A  S  P   : V  L  C  R  E  A  S  T  R  S  C  R  P  R  A  P  G  H  S  G  E  P  C  C  M  G  N  *  W  T  Y  S  A  *  A  N  K  G  L  Q  *  C  I  R  G  I  C  M  E  T  S  F  *  G  F  H  I  R  G  E  I  *  R  S  K  G  L  Y  F  *  S  S  *  S  T  S  R  *  G  *  K  H  Q  S  R  E  G  N  S  R  F  S  W  S  A  G  G  L  T  Y  S  S  R  L  F  G  V  A  V  K  N  L  W  L  A  L  A  R  S  N  K  S  L  K  Y  Y  L  V  Y  G  *  N  F  V  C  L  F  F  Q  H  L  V  *  C  I  L  L  S  W  L  E  V  V  I  P  K  *  C  *  T  S  W  L  Q  A  V  V  F  G  R  I  V  Y  S  T  F  F  V  G  V  L  T  V  L  A  N  V  P  N  N  N  T  S  V  G  L  A  S  F  </second_frame>
            <third_frame>   Y  V  C  K  R  E  T  T  G  A  P  N  A  T  Q  Q  P  P  I  Q  F  F  *  K  R  T  S  S  S  K  L  S  M  K  D  R  S  S  V  I  V  R  *  S  Y  K  F  N  H  G  S  S  *  I  F  R  L  Y  S  H  N  S  S  S  P  Q  S  V  D  P  *  S  N  S  S  G  G  R  *  A  P  D  P  F  P  S  R  R  *  G  C  L  T  R  *  R  R  L  P  L  R  S  P  L  P  R  R  R  R  S  N  S  S  F  L  F  F  L  L  L  I  F  R  I  R  V  V  F  L  I  I  H  P  R  T  G  P  M  L  T  V  K  R  V  P  T  L  V  S  N  Y  Q  E  D  V  L  E  G  N  V  M  G  C  G  R  K  C  L  G  K  C  C  M  P   : V  S  V  L  P  L  Y  A  F  K  N  D  D  N  E  P  I  E  N  D  V  Q  T  L  P  E  E  E  C  Q  M  S  F  L  N  D  L  L  L  G  L  W  E  E  R  M  S  Q  G  L  F  R  Y  D  V  T  T  C  E  T  K  V  I  P  G  R  C  G  F  I  A  Q  L  N  E  G  R  H  L  K  K  R  P  T  E  F  C  I  D  K  V  L  Q  P  F  D  E  N  K  F  N  F  T  K  V  G  Q  E  E  V  L  F  R  F  E  P  S  T  D  Y  K  A  H  Y  F  S  G  M  R  V  N  S  G  I  S  P  S  I  V  A  I  N  :  V  S  P  I  E  Y  G  H  V  L  L  I  P  R  V  L  D  C  L  P  Q  R  I  D  R  D  S  F  A  I  A  L  H  F  A  R  E  V  A  D  P  F  F  R  V  G  Y  N  S  L  G  A  F  A  T  I  N  H  L  H  F  Q  :  A  Y  Y  L  S  V  P  F  P  V  E  K  A  P  I  Q  K  I  L  A  R  K  G  L  G  G  A  G  V  I  V  S  K  L  L  N  Y  P  V  R  G  F  A  F  E  G  G  N  G  S  T  A  R  D  L  S  D  A  V  V  N  S  C  I  S  L  Q  N  K  N  I  P  F  N  I  L  I  A  Q  C  G  K  K  I  F  L  L  P  Q  :  C  Y  A  E  K  Q  A  L  G  V  V  D  Q  E  L  L  D  T  Q  V  N  P  A  V  W  E  I  S  G  H  I  V  L  K  R  T  K  D  Y  N  D  A  S  E  E  Y  A  W  K  L  L  S  E  V  S  I  S  E  E  R  F  E  E  V  K  G  Y  I  S  E  A  A  D  L  Q  A  D  E  D  E  N  I  N  P  E  K  E  I  P  D  S  P  G  P  Q  V  A  S  H  I  P  P  D  C  L  V  L  Q  *  R  I  C  G  L  L  L  Q  D  L  I  K  V  *  S  I  I  *  C  M  V  E  I  L  C  V  C  F  S  S  I  L  F  D  A  Y  C  C  L  G  W  R  L  *  S  P  N  S  V  K  R  H  G  C  K  L  W  S  L  A  G  L  F  T  V  P  F  L  L  V  F  *  L  C  *  Q  M  F  L  I  I  T  P  V  *  D  *  Q  V  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26086" stop="25849"/>
                    <exon start="25124" stop="24700"/>
                    <exon start="24623" stop="24438"/>
                    <exon start="24350" stop="24084"/>
                    <exon start="21982" stop="21656"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1440</number_coding_nucleotides>
                  <number_encoded_amino_acids>480</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RRLPLRSPLPRRRRSNSSFLFFLLLIFRIRVVFLIIHPRTGPMLTVKRVPTLVSNYQEDVLEGNVMGCGRKCLGKCCMPVSVLPLYAFKNDDNEPIENDVQTLPEEECQMSFLNDLLLGLWEERMSQGLFRYDVTTCETKVIPGRCGFIAQLNEGRHLKKRPTEFCIDKVLQPFDENKFNFTKVGQEEVLFRFEPSTDYKAHYFSGMRVNSGISPSIVAINVSPIEYGHVLLIPRVLDCLPQRIDRDSFAIALHFAREVADPFFRVGYNSLGAFATINHLHFQAYYLSVPFPVEKAPIQKILARKGLGGAGVIVSKLLNYPVRGFAFEGGNGSTARDLSDAVVNSCISLQNKNIPFNILIAQCGKKIFLLPQCYAEKQALGVVDQELLDTQVNPAVWEISGHIVLKRTKDYNDASEEYAWKLLSEVSISEERFEEVKGYISEAADLQADEDENINPEKEIPDSPGPQVASHIPPDCLVLQ*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26372" stop="26166"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IRVQERDHRSTKRHPTTTHSILLEKNIFLKIIDEGSLLSNCSLILQIQSRLFLNLSFVFSQFIITAKC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21621" stop="21418"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KFEVLSSVWLKFCVFVFPASCLMHTVVLVGGCNPQIVLNVMAASCGLWQDCLQYLFCWCFDCASKCS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="29966" PGL_stop="28493"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29966" e_stop="29860"/>
            <exon e_start="29423" e_stop="29024"/>
            <exon e_start="28880" e_stop="28702"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.971" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="29966" e_stop="29860" e_length="107"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.989">
            <gDNA_intron_boundary i_start="29859" i_stop="29424" i_length="436"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="29423" e_stop="29024" e_length="400"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.971">
            <gDNA_intron_boundary i_start="29023" i_stop="28881" i_length="143"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="28880" e_stop="28702" e_length="179"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29966" stop="29860"/>
              <exon start="29423" stop="29024"/>
              <exon start="28880" stop="28702"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587536" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAATTTGTTGGGTCTTATGAGAGTTCGTATTCACAGAGGTATTAATTTGGCTATTAGAGATGTTACTACCAGCGATCCTTACGTTGTTGTTAGGATGGGCAAACAG : GGTGATTATTTGGTCAACTTGCACGCTCCTCTATTGTTCGACCTATTGAATAATTGGGGCAGATGGAATAAATCGAATTTGAATCTTGATCATTTCTTTGTTGCTTGTGTTACCTTGACTAGTTCATATCTTAATTGGGTTCATTAAAAGAGAAGATAAAAAGACGACTACTTTTGAGTAATGAATTGCAGTAATAGATTTAAAACTAGTTTGGGCTTAGTTTTTGCCATGTTGATGACTGGCTTCTAACAAAATAAATACAAATATACTTCCTTGTTATGTTAATTATTAATATTTGGAGCAGAAATTGAAGACTCGAGTGGTGAAGAAGAATCTCAACCCAGAATGGAATGAAGAATTAACACTATCTATTACCGAGCCAATTCTCCCAATCAAACTG : CATGTTTATGACAAGGATATATTTTCTCTTGACGATAAGATGGGTGATGCAGAAGTTGACATACAGCCATTTATAGATGCGGCGAGAAAGCGGTACAAGAACATCCCTAGTGGAACCATAATCACAAAAATAAAGCCAAGCAGGCAAAATTGTTTCTCTGAAGAGAGCTCCATTGTGTG</gDNA_template>
            <first_frame> R  I  C  W  V  L  *  E  F  V  F  T  E  V  L  I  W  L  L  E  M  L  L  P  A  I  L  T  L  L  L  G  W  A  N  R :   V  I  I  W  S  T  C  T  L  L  Y  C  S  T  Y  *  I  I  G  A  D  G  I  N  R  I  *  I  L  I  I  S  L  L  L  V  L  P  *  L  V  H  I  L  I  G  F  I  K  R  E  D  K  K  T  T  T  F  E  *  *  I  A  V  I  D  L  K  L  V  W  A  *  F  L  P  C  *  *  L  A  S  N  K  I  N  T  N  I  L  P  C  Y  V  N  Y  *  Y  L  E  Q  K  L  K  T  R  V  V  K  K  N  L  N  P  E  W  N  E  E  L  T  L  S  I  T  E  P  I  L  P  I  K  L  :  H  V  Y  D  K  D  I  F  S  L  D  D  K  M  G  D  A  E  V  D  I  Q  P  F  I  D  A  A  R  K  R  Y  K  N  I  P  S  G  T  I  I  T  K  I  K  P  S  R  Q  N  C  F  S  E  E  S  S  I  V   </first_frame>
            <second_frame>  E  F  V  G  S  Y  E  S  S  Y  S  Q  R  Y  *  F  G  Y  *  R  C  Y  Y  Q  R  S  L  R  C  C  *  D  G  Q  T   : G  *  L  F  G  Q  L  A  R  S  S  I  V  R  P  I  E  *  L  G  Q  M  E  *  I  E  F  E  S  *  S  F  L  C  C  L  C  Y  L  D  *  F  I  S  *  L  G  S  L  K  E  K  I  K  R  R  L  L  L  S  N  E  L  Q  *  *  I  *  N  *  F  G  L  S  F  C  H  V  D  D  W  L  L  T  K  *  I  Q  I  Y  F  L  V  M  L  I  I  N  I  W  S  R  N  *  R  L  E  W  *  R  R  I  S  T  Q  N  G  M  K  N  *  H  Y  L  L  P  S  Q  F  S  Q  S  N  C :   M  F  M  T  R  I  Y  F  L  L  T  I  R  W  V  M  Q  K  L  T  Y  S  H  L  *  M  R  R  E  S  G  T  R  T  S  L  V  E  P  *  S  Q  K  *  S  Q  A  G  K  I  V  S  L  K  R  A  P  L  C  </second_frame>
            <third_frame>   N  L  L  G  L  M  R  V  R  I  H  R  G  I  N  L  A  I  R  D  V  T  T  S  D  P  Y  V  V  V  R  M  G  K  Q  :  G  D  Y  L  V  N  L  H  A  P  L  L  F  D  L  L  N  N  W  G  R  W  N  K  S  N  L  N  L  D  H  F  F  V  A  C  V  T  L  T  S  S  Y  L  N  W  V  H  *  K  R  R  *  K  D  D  Y  F  *  V  M  N  C  S  N  R  F  K  T  S  L  G  L  V  F  A  M  L  M  T  G  F  *  Q  N  K  Y  K  Y  T  S  L  L  C  *  L  L  I  F  G  A  E  I  E  D  S  S  G  E  E  E  S  Q  P  R  M  E  *  R  I  N  T  I  Y  Y  R  A  N  S  P  N  Q  T   : A  C  L  *  Q  G  Y  I  F  S  *  R  *  D  G  *  C  R  S  *  H  T  A  I  Y  R  C  G  E  K  A  V  Q  E  H  P  *  W  N  H  N  H  K  N  K  A  K  Q  A  K  L  F  L  *  R  E  L  H  C  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29131" stop="29024"/>
                    <exon start="28880" stop="28704"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>285</number_coding_nucleotides>
                  <number_encoded_amino_acids>95</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YLEQKLKTRVVKKNLNPEWNEELTLSITEPILPIKLHVYDKDIFSLDDKMGDAEVDIQPFIDAARKRYKNIPSGTIITKIKPSRQNCFSEESSIV</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29964" stop="29860"/>
                    <exon start="29423" stop="29277"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLLGLMRVRIHRGINLAIRDVTTSDPYVVVRMGKQGDYLVNLHAPLLFDLLNNWGRWNKSNLNLDHFFVACVTLTSSYLNWVH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="29962" e_stop="29860"/>
            <exon e_start="29119" e_stop="29024"/>
            <exon e_start="28880" e_stop="28493"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.971" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="29962" e_stop="29860" e_length="103"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="29859" i_stop="29120" i_length="740"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="29119" e_stop="29024" e_length="96"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.971">
            <gDNA_intron_boundary i_start="29023" i_stop="28881" i_length="143"/>
          </intron>
          <exon e_serial="3" e_score="0.997">
            <gDNA_exon_boundary e_start="28880" e_stop="28493" e_length="388"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29962" stop="29860"/>
              <exon start="29119" stop="29024"/>
              <exon start="28880" stop="28493"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570175" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTGTTGGGTCTTATGAGAGTTCGTATTCACAGAGGTATTAATTTGGCTATTAGAGATGTTACTACCAGCGATCCTTACGTTGTTGTTAGGATGGGCAAACAG : AAATTGAAGACTCGAGTGGTGAAGAAGAATCTCAACCCAGAATGGAATGAAGAATTAACACTATCTATTACCGAGCCAATTCTCCCAATCAAACTG : CATGTTTATGACAAGGATATATTTTCTCTTGACGATAAGATGGGTGATGCAGAAGTTGACATACAGCCATTTATAGATGCGGCGAGAAAGCGGTACAAGAACATCCCTAGTGGAACCATAATCACAAAAATAAAGCCAAGCAGGCAAAATTGTTTCTCTGAAGAGAGCTCCATTGTGTGGGAAAATGATCAGGTTGTACAAAATGTGTTTATTAGATTGCGAAATGTTGAGCGTGGTGAAATAGAACTACAATTGCAGTGGATTGACATTCCTGGTTCCAAGGGTGTGTAGCTAACTACTACTATCCATCAAATCATGTACAGTCACTATCCTTTATTCATGTTGTATTCTGGTCTGTTTTTTGATTAAAAATTTCTGTTACCAAATG</gDNA_template>
            <first_frame> F  V  G  S  Y  E  S  S  Y  S  Q  R  Y  *  F  G  Y  *  R  C  Y  Y  Q  R  S  L  R  C  C  *  D  G  Q  T   : E  I  E  D  S  S  G  E  E  E  S  Q  P  R  M  E  *  R  I  N  T  I  Y  Y  R  A  N  S  P  N  Q  T   : A  C  L  *  Q  G  Y  I  F  S  *  R  *  D  G  *  C  R  S  *  H  T  A  I  Y  R  C  G  E  K  A  V  Q  E  H  P  *  W  N  H  N  H  K  N  K  A  K  Q  A  K  L  F  L  *  R  E  L  H  C  V  G  K  *  S  G  C  T  K  C  V  Y  *  I  A  K  C  *  A  W  *  N  R  T  T  I  A  V  D  *  H  S  W  F  Q  G  C  V  A  N  Y  Y  Y  P  S  N  H  V  Q  S  L  S  F  I  H  V  V  F  W  S  V  F  *  L  K  I  S  V  T  K   </first_frame>
            <second_frame>  L  L  G  L  M  R  V  R  I  H  R  G  I  N  L  A  I  R  D  V  T  T  S  D  P  Y  V  V  V  R  M  G  K  Q  :  K  L  K  T  R  V  V  K  K  N  L  N  P  E  W  N  E  E  L  T  L  S  I  T  E  P  I  L  P  I  K  L  :  H  V  Y  D  K  D  I  F  S  L  D  D  K  M  G  D  A  E  V  D  I  Q  P  F  I  D  A  A  R  K  R  Y  K  N  I  P  S  G  T  I  I  T  K  I  K  P  S  R  Q  N  C  F  S  E  E  S  S  I  V  W  E  N  D  Q  V  V  Q  N  V  F  I  R  L  R  N  V  E  R  G  E  I  E  L  Q  L  Q  W  I  D  I  P  G  S  K  G  V  *  L  T  T  T  I  H  Q  I  M  Y  S  H  Y  P  L  F  M  L  Y  S  G  L  F  F  D  *  K  F  L  L  P  N  </second_frame>
            <third_frame>   C  W  V  L  *  E  F  V  F  T  E  V  L  I  W  L  L  E  M  L  L  P  A  I  L  T  L  L  L  G  W  A  N  R :   N  *  R  L  E  W  *  R  R  I  S  T  Q  N  G  M  K  N  *  H  Y  L  L  P  S  Q  F  S  Q  S  N  C :   M  F  M  T  R  I  Y  F  L  L  T  I  R  W  V  M  Q  K  L  T  Y  S  H  L  *  M  R  R  E  S  G  T  R  T  S  L  V  E  P  *  S  Q  K  *  S  Q  A  G  K  I  V  S  L  K  R  A  P  L  C  G  K  M  I  R  L  Y  K  M  C  L  L  D  C  E  M  L  S  V  V  K  *  N  Y  N  C  S  G  L  T  F  L  V  P  R  V  C  S  *  L  L  L  S  I  K  S  C  T  V  T  I  L  Y  S  C  C  I  L  V  C  F  L  I  K  N  F  C  Y  Q  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29961" stop="29860"/>
                    <exon start="29119" stop="29024"/>
                    <exon start="28880" stop="28590"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>486</number_coding_nucleotides>
                  <number_encoded_amino_acids>162</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLGLMRVRIHRGINLAIRDVTTSDPYVVVRMGKQKLKTRVVKKNLNPEWNEELTLSITEPILPIKLHVYDKDIFSLDDKMGDAEVDIQPFIDAARKRYKNIPSGTIITKIKPSRQNCFSEESSIVWENDQVVQNVFIRLRNVERGEIELQLQWIDIPGSKGV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="36531" PGL_stop="40559"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36531" e_stop="37076"/>
            <exon e_start="37257" e_stop="37346"/>
            <exon e_start="38317" e_stop="38385"/>
            <exon e_start="38679" e_stop="38784"/>
            <exon e_start="38902" e_stop="38990"/>
            <exon e_start="39566" e_stop="39678"/>
            <exon e_start="39777" e_stop="39974"/>
            <exon e_start="40101" e_stop="40559"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.980" e_score="0.995"/>
          <exon-intron don_prob="0.998" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.827" acc_prob="0.811" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.859" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.911" acc_prob="0.967" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="36531" e_stop="37076" e_length="546"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.980">
            <gDNA_intron_boundary i_start="37077" i_stop="37256" i_length="180"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="37257" e_stop="37346" e_length="90"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.959">
            <gDNA_intron_boundary i_start="37347" i_stop="38316" i_length="970"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="38317" e_stop="38385" e_length="69"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="38386" i_stop="38678" i_length="293"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="38679" e_stop="38784" e_length="106"/>
          </exon>
          <intron i_serial="4" don_prob="0.827" acc_prob="0.811">
            <gDNA_intron_boundary i_start="38785" i_stop="38901" i_length="117"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="38902" e_stop="38990" e_length="89"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.859">
            <gDNA_intron_boundary i_start="38991" i_stop="39565" i_length="575"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="39566" e_stop="39678" e_length="113"/>
          </exon>
          <intron i_serial="6" don_prob="0.992" acc_prob="0.997">
            <gDNA_intron_boundary i_start="39679" i_stop="39776" i_length="98"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="39777" e_stop="39974" e_length="198"/>
          </exon>
          <intron i_serial="7" don_prob="0.911" acc_prob="0.967">
            <gDNA_intron_boundary i_start="39975" i_stop="40100" i_length="126"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="40101" e_stop="40559" e_length="459"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36531" stop="37076"/>
              <exon start="37257" stop="37346"/>
              <exon start="38317" stop="38385"/>
              <exon start="38679" stop="38784"/>
              <exon start="38902" stop="38990"/>
              <exon start="39566" stop="39678"/>
              <exon start="39777" stop="39974"/>
              <exon start="40101" stop="40559"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U569351" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGTTTTCCTAGGTGATTTCTTCAACCCTGGAAAATTTTTATTTTAGGGTTTTCTTTTTCTTGGTTTGGGGACTCCAATTATACTGCAATGTGGAATCTTGATATGCATTCTCTCTCAATCTTGAACTGTATAGGTTCAACTACACTGATTTTGAATGTTGAATCCATCTTTTTATGTTTATGATTTTTTATTACCAATTTGTGTTTCCTTTTATTCTTTAATCTCCTTATGCATTATTCTGATCATACAATCTTGATCAAGAAAATGCTGACATATTCTGAATTTGTCTTTTTAATGGCAATGATAAGGTTCAAGGTGGAAAATATCGATGGAGTTAGAGGAAATATGACTTCATATAAATCAAGAATAGGTTTCTGTAGGATGCATACATTATTTTCAGTCCCTAATTGGAAACTCAGCATCCCATGTACTTCTTGGAAAATATTTTGTGCCCCTGAAAATTCACTGGTAGTATCCGAGAAAATAGAAGACGCTGGTCTGTCTGATCCTGAACAAGTTCCTGAGCAACCTTTGAGAACCGAAGAG : TTGAAGTTATTGCTTGCTGATGCTGAAAGATCGAAGCTTCTCAAGAAATTGAGTGAAGCCAACCGATATAATCGGTTGCTTAAGCGAGAG : TTGCAAGCTAAGGAGGATGCGATGGTTAATTTCAAAAGTGAACTTTCAGTCACCGAACTTGAGATTCAG : GCTTTGGCTAGATTGGCTGAAGAAATTGCAAAATCTGCTATCCCTGCTGGTTCAAGAAAAATTAAAGGCAGATATATCCAATCACACCTATTTTCACGTTTGGAAG : CCATAAGTGAAAAATTGAAGGAGCAAATAAAGGGCGTGGAAGCTGTACAAGCCAAAGAGGTTCCTTTATCCTGGGTTGGGGTAGCAGAG : AGTGTGCAAGTAATGGGCTCCTTTGATGGTTGGAGTCAAGGAGAGCACTTATCTCCAGAGTACACCGGCTCTTATATGAACTTTTCAGCTACATTGTTCCTAAGACCTGGAAG : GTACGAAATTAAGTTCTTGGTAGATGATGAGTGGAAACTATCCCCAGAATTACCAACTACCGGAGAGGGGTTAACTAAGAACAATTTATTGGTCGTGGAATAGCTCATTTAGCTAGGACAGGTGCTGAAAGTTTGTACTATAGGTGGAAAAACAACTTGTTAATCGTCGTACAGTTGATCTCAGGACTCTTAAGCAGC : GTAGCTCATGAGGTGGGATTGCTCAAGACATCTAATTCGCTCGACCTACTATTAACTCAAAGTGTTGAAGGTATATATAATAGACCAGACCTCCTAAAGTGGTGGTATAAAGGGCGATCCAAGACTTCCGTTTTTCTCTTATAAAGTCTTGAGTTGAATGTTCAGACTCTTTCGAAAATGTTTGGAAGCTTTTGGTAAAAAGGTTTATTTTTAAAAAAGTGAGGTATTTATTTGGCTGAGCTTTTATTTTTTAAAATAAGTTGTACTATCACCACAAATTTAAGTGAAATGATTCTGTTCGATTTATCAGATGAATCTGATAATAAATGTCTCCAATTTTGTATGATTTACATCTAACCCACCTCCATTGTTAATAGTTAGTAGTCCGTACATTAAACTTTGATGATTCAAAAAAATCAGAGCCGCGACTTTATTATTTAGTATATACAACAACCCTAA</gDNA_template>
            <first_frame> C  F  P  R  *  F  L  Q  P  W  K  I  F  I  L  G  F  S  F  S  W  F  G  D  S  N  Y  T  A  M  W  N  L  D  M  H  S  L  S  I  L  N  C  I  G  S  T  T  L  I  L  N  V  E  S  I  F  L  C  L  *  F  F  I  T  N  L  C  F  L  L  F  F  N  L  L  M  H  Y  S  D  H  T  I  L  I  K  K  M  L  T  Y  S  E  F  V  F  L  M  A  M  I  R  F  K  V  E  N  I  D  G  V  R  G  N  M  T  S  Y  K  S  R  I  G  F  C  R  M  H  T  L  F  S  V  P  N  W  K  L  S  I  P  C  T  S  W  K  I  F  C  A  P  E  N  S  L  V  V  S  E  K  I  E  D  A  G  L  S  D  P  E  Q  V  P  E  Q  P  L  R  T  E  E  :  L  K  L  L  L  A  D  A  E  R  S  K  L  L  K  K  L  S  E  A  N  R  Y  N  R  L  L  K  R  E  :  L  Q  A  K  E  D  A  M  V  N  F  K  S  E  L  S  V  T  E  L  E  I  Q  :  A  L  A  R  L  A  E  E  I  A  K  S  A  I  P  A  G  S  R  K  I  K  G  R  Y  I  Q  S  H  L  F  S  R  L  E   : A  I  S  E  K  L  K  E  Q  I  K  G  V  E  A  V  Q  A  K  E  V  P  L  S  W  V  G  V  A  E  :  S  V  Q  V  M  G  S  F  D  G  W  S  Q  G  E  H  L  S  P  E  Y  T  G  S  Y  M  N  F  S  A  T  L  F  L  R  P  G  R :   Y  E  I  K  F  L  V  D  D  E  W  K  L  S  P  E  L  P  T  T  G  E  G  L  T  K  N  N  L  L  V  V  E  *  L  I  *  L  G  Q  V  L  K  V  C  T  I  G  G  K  T  T  C  *  S  S  Y  S  *  S  Q  D  S  *  A  A :   *  L  M  R  W  D  C  S  R  H  L  I  R  S  T  Y  Y  *  L  K  V  L  K  V  Y  I  I  D  Q  T  S  *  S  G  G  I  K  G  D  P  R  L  P  F  F  S  Y  K  V  L  S  *  M  F  R  L  F  R  K  C  L  E  A  F  G  K  K  V  Y  F  *  K  S  E  V  F  I  W  L  S  F  Y  F  L  K  *  V  V  L  S  P  Q  I  *  V  K  *  F  C  S  I  Y  Q  M  N  L  I  I  N  V  S  N  F  V  *  F  T  S  N  P  P  P  L  L  I  V  S  S  P  Y  I  K  L  *  *  F  K  K  I  R  A  A  T  L  L  F  S  I  Y  N  N  P   </first_frame>
            <second_frame>  V  F  L  G  D  F  F  N  P  G  K  F  L  F  *  G  F  L  F  L  G  L  G  T  P  I  I  L  Q  C  G  I  L  I  C  I  L  S  Q  S  *  T  V  *  V  Q  L  H  *  F  *  M  L  N  P  S  F  Y  V  Y  D  F  L  L  P  I  C  V  S  F  Y  S  L  I  S  L  C  I  I  L  I  I  Q  S  *  S  R  K  C  *  H  I  L  N  L  S  F  *  W  Q  *  *  G  S  R  W  K  I  S  M  E  L  E  E  I  *  L  H  I  N  Q  E  *  V  S  V  G  C  I  H  Y  F  Q  S  L  I  G  N  S  A  S  H  V  L  L  G  K  Y  F  V  P  L  K  I  H  W  *  Y  P  R  K  *  K  T  L  V  C  L  I  L  N  K  F  L  S  N  L  *  E  P  K  S :   *  S  Y  C  L  L  M  L  K  D  R  S  F  S  R  N  *  V  K  P  T  D  I  I  G  C  L  S  E  S :   C  K  L  R  R  M  R  W  L  I  S  K  V  N  F  Q  S  P  N  L  R  F  R :   L  W  L  D  W  L  K  K  L  Q  N  L  L  S  L  L  V  Q  E  K  L  K  A  D  I  S  N  H  T  Y  F  H  V  W  K  :  P  *  V  K  N  *  R  S  K  *  R  A  W  K  L  Y  K  P  K  R  F  L  Y  P  G  L  G  *  Q  R :   V  C  K  *  W  A  P  L  M  V  G  V  K  E  S  T  Y  L  Q  S  T  P  A  L  I  *  T  F  Q  L  H  C  S  *  D  L  E   : G  T  K  L  S  S  W  *  M  M  S  G  N  Y  P  Q  N  Y  Q  L  P  E  R  G  *  L  R  T  I  Y  W  S  W  N  S  S  F  S  *  D  R  C  *  K  F  V  L  *  V  E  K  Q  L  V  N  R  R  T  V  D  L  R  T  L  K  Q   : R  S  S  *  G  G  I  A  Q  D  I  *  F  A  R  P  T  I  N  S  K  C  *  R  Y  I  *  *  T  R  P  P  K  V  V  V  *  R  A  I  Q  D  F  R  F  S  L  I  K  S  *  V  E  C  S  D  S  F  E  N  V  W  K  L  L  V  K  R  F  I  F  K  K  V  R  Y  L  F  G  *  A  F  I  F  *  N  K  L  Y  Y  H  H  K  F  K  *  N  D  S  V  R  F  I  R  *  I  *  *  *  M  S  P  I  L  Y  D  L  H  L  T  H  L  H  C  *  *  L  V  V  R  T  L  N  F  D  D  S  K  K  S  E  P  R  L  Y  Y  L  V  Y  T  T  T  L  </second_frame>
            <third_frame>   F  S  *  V  I  S  S  T  L  E  N  F  Y  F  R  V  F  F  F  L  V  W  G  L  Q  L  Y  C  N  V  E  S  *  Y  A  F  S  L  N  L  E  L  Y  R  F  N  Y  T  D  F  E  C  *  I  H  L  F  M  F  M  I  F  Y  Y  Q  F  V  F  P  F  I  L  *  S  P  Y  A  L  F  *  S  Y  N  L  D  Q  E  N  A  D  I  F  *  I  C  L  F  N  G  N  D  K  V  Q  G  G  K  Y  R  W  S  *  R  K  Y  D  F  I  *  I  K  N  R  F  L  *  D  A  Y  I  I  F  S  P  *  L  E  T  Q  H  P  M  Y  F  L  E  N  I  L  C  P  *  K  F  T  G  S  I  R  E  N  R  R  R  W  S  V  *  S  *  T  S  S  *  A  T  F  E  N  R  R   : V  E  V  I  A  C  *  C  *  K  I  E  A  S  Q  E  I  E  *  S  Q  P  I  *  S  V  A  *  A  R   : V  A  S  *  G  G  C  D  G  *  F  Q  K  *  T  F  S  H  R  T  *  D  S   : G  F  G  *  I  G  *  R  N  C  K  I  C  Y  P  C  W  F  K  K  N  *  R  Q  I  Y  P  I  T  P  I  F  T  F  G  S :   H  K  *  K  I  E  G  A  N  K  G  R  G  S  C  T  S  Q  R  G  S  F  I  L  G  W  G  S  R   : E  C  A  S  N  G  L  L  *  W  L  E  S  R  R  A  L  I  S  R  V  H  R  L  L  Y  E  L  F  S  Y  I  V  P  K  T  W  K  :  V  R  N  *  V  L  G  R  *  *  V  E  T  I  P  R  I  T  N  Y  R  R  G  V  N  *  E  Q  F  I  G  R  G  I  A  H  L  A  R  T  G  A  E  S  L  Y  Y  R  W  K  N  N  L  L  I  V  V  Q  L  I  S  G  L  L  S  S  :  V  A  H  E  V  G  L  L  K  T  S  N  S  L  D  L  L  L  T  Q  S  V  E  G  I  Y  N  R  P  D  L  L  K  W  W  Y  K  G  R  S  K  T  S  V  F  L  L  *  S  L  E  L  N  V  Q  T  L  S  K  M  F  G  S  F  W  *  K  G  L  F  L  K  K  *  G  I  Y  L  A  E  L  L  F  F  K  I  S  C  T  I  T  T  N  L  S  E  M  I  L  F  D  L  S  D  E  S  D  N  K  C  L  Q  F  C  M  I  Y  I  *  P  T  S  I  V  N  S  *  *  S  V  H  *  T  L  M  I  Q  K  N  Q  S  R  D  F  I  I  *  Y  I  Q  Q  P  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36714" stop="37076"/>
                    <exon start="37257" stop="37346"/>
                    <exon start="38317" stop="38385"/>
                    <exon start="38679" stop="38784"/>
                    <exon start="38902" stop="38990"/>
                    <exon start="39566" stop="39678"/>
                    <exon start="39777" stop="39879"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>930</number_coding_nucleotides>
                  <number_encoded_amino_acids>310</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFITNLCFLLFFNLLMHYSDHTILIKKMLTYSEFVFLMAMIRFKVENIDGVRGNMTSYKSRIGFCRMHTLFSVPNWKLSIPCTSWKIFCAPENSLVVSEKIEDAGLSDPEQVPEQPLRTEELKLLLADAERSKLLKKLSEANRYNRLLKRELQAKEDAMVNFKSELSVTELEIQALARLAEEIAKSAIPAGSRKIKGRYIQSHLFSRLEAISEKLKEQIKGVEAVQAKEVPLSWVGVAESVQVMGSFDGWSQGEHLSPEYTGSYMNFSATLFLRPGRYEIKFLVDDEWKLSPELPTTGEGLTKNNLLVVE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="39855" stop="39974"/>
                    <exon start="40101" stop="40244"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>261</number_coding_nucleotides>
                  <number_encoded_amino_acids>87</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EQFIGRGIAHLARTGAESLYYRWKNNLLIVVQLISGLLSSVAHEVGLLKTSNSLDLLLTQSVEGIYNRPDLLKWWYKGRSKTSVFLL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="37555" e_stop="38202"/>
            <exon e_start="38317" e_stop="38385"/>
            <exon e_start="38679" e_stop="38778"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.959" e_score="0.983"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.983">
            <gDNA_exon_boundary e_start="37555" e_stop="38202" e_length="648"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.959">
            <gDNA_intron_boundary i_start="38203" i_stop="38316" i_length="114"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="38317" e_stop="38385" e_length="69"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="38386" i_stop="38678" i_length="293"/>
          </intron>
          <exon e_serial="3" e_score="0.990">
            <gDNA_exon_boundary e_start="38679" e_stop="38778" e_length="100"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37555" stop="38202"/>
              <exon start="38317" stop="38385"/>
              <exon start="38679" stop="38778"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589827" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTCCCTTAGACCTCCAAGTCCATCCCTTCTGGCCCTCACTAATATTTGATAAGTGTGGAAACATAGTCTCTGGTACTCAGGTCCTGTTAATAACTCGCATGGTTAGGCCTTTGGAAGCATATTCACAGCTTATGTCAGACTTTTAAGCTAACATAAAGATTAAGGTGGGGAATCCTAGATATACATGGTTTTGGAGAGATGCTTGGATAGGTCACAGACCTTCGAAGATCAAATACCAGGACCTTTATTTGTTTCACTACTAAGACAGGTAGTCTGGCCTCAGATTGTTGGAATGGGGGATGCTGGTGCATTACTTTTAGAAGGATTTGTTTTGATTGGGAGATACCTAAATGGCTCTCCTATTGGCTGATTTAGATAAGGTGGAGCTTTGTGTGAAGTATCTTGAGTCTATAATCCAGGGAAGTGGGGATCGACGATGATATGACACATCGTATTGGTGCAGCATAGATGAAGTGGAGACTTGCATCCGGAGTCTTGTGTGATAAAAAAGTACCACTGAAACTTAAAGGTGTTGTTTTATAGAGTGGTGGTTAGAACGACTTCCTTGAATTCCGGTGATCAGTTTTATATAGTAAGATCTGTTTCTGAGATTTCTGGATGCGATAGGTGAACTAAACTCATAGATA : TTGCAAGCTAAGGAGGATGCGATGGTTAATTTCAAAAGTGAACTTTCAGTCACCGAACTTGAGATTCAG : GCTTTGGCTAGATTGGCTGAAGAAATTGCAAAATCTGCTATCCCTGCTGGTTCAAGAAAAATTAAAGGCAGATATATCCAATCACACCTATTTTCACGTT</gDNA_template>
            <first_frame> I  P  L  D  L  Q  V  H  P  F  W  P  S  L  I  F  D  K  C  G  N  I  V  S  G  T  Q  V  L  L  I  T  R  M  V  R  P  L  E  A  Y  S  Q  L  M  S  D  F  *  A  N  I  K  I  K  V  G  N  P  R  Y  T  W  F  W  R  D  A  W  I  G  H  R  P  S  K  I  K  Y  Q  D  L  Y  L  F  H  Y  *  D  R  *  S  G  L  R  L  L  E  W  G  M  L  V  H  Y  F  *  K  D  L  F  *  L  G  D  T  *  M  A  L  L  L  A  D  L  D  K  V  E  L  C  V  K  Y  L  E  S  I  I  Q  G  S  G  D  R  R  *  Y  D  T  S  Y  W  C  S  I  D  E  V  E  T  C  I  R  S  L  V  *  *  K  S  T  T  E  T  *  R  C  C  F  I  E  W  W  L  E  R  L  P  *  I  P  V  I  S  F  I  *  *  D  L  F  L  R  F  L  D  A  I  G  E  L  N  S  *  I  :  L  Q  A  K  E  D  A  M  V  N  F  K  S  E  L  S  V  T  E  L  E  I  Q  :  A  L  A  R  L  A  E  E  I  A  K  S  A  I  P  A  G  S  R  K  I  K  G  R  Y  I  Q  S  H  L  F  S  R  </first_frame>
            <second_frame>  F  P  *  T  S  K  S  I  P  S  G  P  H  *  Y  L  I  S  V  E  T  *  S  L  V  L  R  S  C  *  *  L  A  W  L  G  L  W  K  H  I  H  S  L  C  Q  T  F  K  L  T  *  R  L  R  W  G  I  L  D  I  H  G  F  G  E  M  L  G  *  V  T  D  L  R  R  S  N  T  R  T  F  I  C  F  T  T  K  T  G  S  L  A  S  D  C  W  N  G  G  C  W  C  I  T  F  R  R  I  C  F  D  W  E  I  P  K  W  L  S  Y  W  L  I  *  I  R  W  S  F  V  *  S  I  L  S  L  *  S  R  E  V  G  I  D  D  D  M  T  H  R  I  G  A  A  *  M  K  W  R  L  A  S  G  V  L  C  D  K  K  V  P  L  K  L  K  G  V  V  L  *  S  G  G  *  N  D  F  L  E  F  R  *  S  V  L  Y  S  K  I  C  F  *  D  F  W  M  R  *  V  N  *  T  H  R  Y :   C  K  L  R  R  M  R  W  L  I  S  K  V  N  F  Q  S  P  N  L  R  F  R :   L  W  L  D  W  L  K  K  L  Q  N  L  L  S  L  L  V  Q  E  K  L  K  A  D  I  S  N  H  T  Y  F  H  V </second_frame>
            <third_frame>   S  L  R  P  P  S  P  S  L  L  A  L  T  N  I  *  *  V  W  K  H  S  L  W  Y  S  G  P  V  N  N  S  H  G  *  A  F  G  S  I  F  T  A  Y  V  R  L  L  S  *  H  K  D  *  G  G  E  S  *  I  Y  M  V  L  E  R  C  L  D  R  S  Q  T  F  E  D  Q  I  P  G  P  L  F  V  S  L  L  R  Q  V  V  W  P  Q  I  V  G  M  G  D  A  G  A  L  L  L  E  G  F  V  L  I  G  R  Y  L  N  G  S  P  I  G  *  F  R  *  G  G  A  L  C  E  V  S  *  V  Y  N  P  G  K  W  G  S  T  M  I  *  H  I  V  L  V  Q  H  R  *  S  G  D  L  H  P  E  S  C  V  I  K  K  Y  H  *  N  L  K  V  L  F  Y  R  V  V  V  R  T  T  S  L  N  S  G  D  Q  F  Y  I  V  R  S  V  S  E  I  S  G  C  D  R  *  T  K  L  I  D   : I  A  S  *  G  G  C  D  G  *  F  Q  K  *  T  F  S  H  R  T  *  D  S   : G  F  G  *  I  G  *  R  N  C  K  I  C  Y  P  C  W  F  K  K  N  *  R  Q  I  Y  P  I  T  P  I  F  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0073P13.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="60357" PGL_stop="66853"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="60357" e_stop="60450"/>
            <exon e_start="60545" e_stop="60595"/>
            <exon e_start="60686" e_stop="60772"/>
            <exon e_start="61580" e_stop="61701"/>
            <exon e_start="61821" e_stop="61897"/>
            <exon e_start="61986" e_stop="62110"/>
            <exon e_start="62780" e_stop="62872"/>
            <exon e_start="63388" e_stop="63480"/>
            <exon e_start="63599" e_stop="63796"/>
            <exon e_start="63928" e_stop="64032"/>
            <exon e_start="64619" e_stop="64684"/>
            <exon e_start="65130" e_stop="65207"/>
            <exon e_start="65452" e_stop="65563"/>
            <exon e_start="65644" e_stop="65754"/>
            <exon e_start="66132" e_stop="66309"/>
            <exon e_start="66655" e_stop="66852"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.972" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.796" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.956" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.765" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.890" e_score="1.000"/>
          <exon-intron don_prob="0.882" acc_prob="0.963" e_score="1.000"/>
          <exon-intron don_prob="0.923" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="60357" e_stop="60450" e_length="94"/>
          </exon>
          <intron i_serial="1" don_prob="0.972" acc_prob="1.000">
            <gDNA_intron_boundary i_start="60451" i_stop="60544" i_length="94"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="60545" e_stop="60595" e_length="51"/>
          </exon>
          <intron i_serial="2" don_prob="0.988" acc_prob="0.989">
            <gDNA_intron_boundary i_start="60596" i_stop="60685" i_length="90"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="60686" e_stop="60772" e_length="87"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.796">
            <gDNA_intron_boundary i_start="60773" i_stop="61579" i_length="807"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="61580" e_stop="61701" e_length="122"/>
          </exon>
          <intron i_serial="4" don_prob="0.967" acc_prob="0.998">
            <gDNA_intron_boundary i_start="61702" i_stop="61820" i_length="119"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="61821" e_stop="61897" e_length="77"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.956">
            <gDNA_intron_boundary i_start="61898" i_stop="61985" i_length="88"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="61986" e_stop="62110" e_length="125"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.989">
            <gDNA_intron_boundary i_start="62111" i_stop="62779" i_length="669"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="62780" e_stop="62872" e_length="93"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="62873" i_stop="63387" i_length="515"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="63388" e_stop="63480" e_length="93"/>
          </exon>
          <intron i_serial="8" don_prob="0.999" acc_prob="0.985">
            <gDNA_intron_boundary i_start="63481" i_stop="63598" i_length="118"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="63599" e_stop="63796" e_length="198"/>
          </exon>
          <intron i_serial="9" don_prob="0.765" acc_prob="0.988">
            <gDNA_intron_boundary i_start="63797" i_stop="63927" i_length="131"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="63928" e_stop="64032" e_length="105"/>
          </exon>
          <intron i_serial="10" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="64033" i_stop="64618" i_length="586"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="64619" e_stop="64684" e_length="66"/>
          </exon>
          <intron i_serial="11" don_prob="0.969" acc_prob="0.986">
            <gDNA_intron_boundary i_start="64685" i_stop="65129" i_length="445"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="65130" e_stop="65207" e_length="78"/>
          </exon>
          <intron i_serial="12" don_prob="0.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="65208" i_stop="65451" i_length="244"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="65452" e_stop="65563" e_length="112"/>
          </exon>
          <intron i_serial="13" don_prob="1.000" acc_prob="0.890">
            <gDNA_intron_boundary i_start="65564" i_stop="65643" i_length="80"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="65644" e_stop="65754" e_length="111"/>
          </exon>
          <intron i_serial="14" don_prob="0.882" acc_prob="0.963">
            <gDNA_intron_boundary i_start="65755" i_stop="66131" i_length="377"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="66132" e_stop="66309" e_length="178"/>
          </exon>
          <intron i_serial="15" don_prob="0.923" acc_prob="0.995">
            <gDNA_intron_boundary i_start="66310" i_stop="66654" i_length="345"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="66655" e_stop="66852" e_length="198"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60357" stop="60450"/>
              <exon start="60545" stop="60595"/>
              <exon start="60686" stop="60772"/>
              <exon start="61580" stop="61701"/>
              <exon start="61821" stop="61897"/>
              <exon start="61986" stop="62110"/>
              <exon start="62780" stop="62872"/>
              <exon start="63388" stop="63480"/>
              <exon start="63599" stop="63796"/>
              <exon start="63928" stop="64032"/>
              <exon start="64619" stop="64684"/>
              <exon start="65130" stop="65207"/>
              <exon start="65452" stop="65563"/>
              <exon start="65644" stop="65754"/>
              <exon start="66132" stop="66309"/>
              <exon start="66655" stop="66852"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581543" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGCAATGGCTATGGCAATAGCTCTTCGGAGGCTTTCTGCTACAATTGACAAGCCAGTTAAGAGTCTTTACAATGGAGGCTCTATCTATTACATG : TCATCACTGCCTAATGAAGCTGTATACGACAAGGAAAAATCCGGAGTAGCT : TGGCCAAAGCAACTGAATGCTCCACTAGAGGTTGTTGATCCTGAGATTGCTGACATTATTGAGCATGAGAAAGCACGCCAATGGAAG : GGGCTCGAACTCATTCCATCAGAAAATTTCACTTCCGTTTCGGTGATGCAAGCAGTTGGATCAGTCATGACTAACAAGTACAGTGAAGGATATCCTGGTGCCAGATACTATGGAGGAAATGA : GTACATAGACATGGCAGAAACCTTATGCCAGAAACGTGCTTTGGAAGCATTCAGGTTGGATCCTGCAAAATGGGGAG : TGAATGTGCAGCCTCTATCAGGATCACCCGCTAATTTTCATGTTTACACTGCATTATTAAAACCTCATGAGAGAATCATGGCTCTTGATCTTCCTCATGGTGGACATCTTTCTCATGGATATCAG : ACTGATACAAAGAAGATATCTGCAGTCTCTATATTCTTTGAGACAATGCCATACAGACTCGATGAGAGCACTGGATATATTGACTATGACCAG : CTCGAGAAAAGTGCCACACTCTTTAGGCCAAAATTGATTGTTGCTGGTGCTAGTGCCTACGCACGTCTTTATGACTATGACAGAATCCGGAAG : GTTTGCAACAAACAGAAAGCTATTTTGTTAGCAGATATGGCACACATTAGTGGATTGGTTGCAGCTGGAGTTATCCCATCACCATTTGACTATGCTGATGTTGTCACTACCACAACCCACAAGTCCCTTCGTGGCCCTCGTGGTGCTATGATTTTTTATAGGAAGGGTGTTAAAGAGGTTAACAAGCAAGGCAAGGAG : GTTTTCTACGACTATGAAGACAAAATTAACCAGGCAGTCTTTCCTGGACTTCAAGGTGGTCCCCACAATCACACCATCACTGGATTGGCAGTTGCCTTGAAACAG : GCCACTACTCCAGAATACAGAGCTTACCAAGAGCAAGTTCTCAGCAACTCCGCGAAATTTGCCCAG : GCTTTAGAGGAGAAGGGCTATGAACTTGTCTCTGGAGGAACTGATAATCACTTGGTTTTGGTGAACATGAAAAACAAG : GGTATTGATGGTTCCAGGGTTGAAAAAGTCTTGGAAGCTGTACATATTGCAGCCAACAAGAACACCGTTCCTGGAGATGTTTCTGCCATGGTCCCTGGTGGCATCAGAATGG : GAACTCCTGCACTCACTTCTCGGGGATTTCTTGAGGAAGATTTTGTTAAAGTTGCTGATTTCTTTGATGCTGCTGTGAAGATAGCAGTGAAAGTAAAGGCTGAAACTCAAG : GGACAAAGTTGAAAGACTTTGTATCAACACTAGAATCCAGTGCTCCAATCAAGTCTGAAATTGCAAAACTCCGTCAGGATGTGGAGGAGTATGCTAAGCAGTTCCCTACAATTGGGTTTGAGAAGGAAACCATGAAGTACAAAAACTAAGAGGTACATACACAAGGAACGTCATTGAG : GCACCTAATATCAAGCTTCAGAAAGGTGAAAGGGGAAGAAAATCCAACCATGAATTGCTTTCAAGTACATGTTCTCATGCTTATATATTGTAAAGAAATCCAGCACATGTTGGTTCCCATGTATGCAGTTTGTATATTAATCACTTACAGTCCAACTGAGGTCCTTTTTAAAGCAATAAACTTTTGTTACCTTTGCTG</gDNA_template>
            <first_frame> C  N  G  Y  G  N  S  S  S  E  A  F  C  Y  N  *  Q  A  S  *  E  S  L  Q  W  R  L  Y  L  L  H   : V  I  T  A  *  *  S  C  I  R  Q  G  K  I  R  S  S   : L  A  K  A  T  E  C  S  T  R  G  C  *  S  *  D  C  *  H  Y  *  A  *  E  S  T  P  M  E   : G  A  R  T  H  S  I  R  K  F  H  F  R  F  G  D  A  S  S  W  I  S  H  D  *  Q  V  Q  *  R  I  S  W  C  Q  I  L  W  R  K  *  :  V  H  R  H  G  R  N  L  M  P  E  T  C  F  G  S  I  Q  V  G  S  C  K  M  G  S :   E  C  A  A  S  I  R  I  T  R  *  F  S  C  L  H  C  I  I  K  T  S  *  E  N  H  G  S  *  S  S  S  W  W  T  S  F  S  W  I  S   : D  *  Y  K  E  D  I  C  S  L  Y  I  L  *  D  N  A  I  Q  T  R  *  E  H  W  I  Y  *  L  *  P   : A  R  E  K  C  H  T  L  *  A  K  I  D  C  C  W  C  *  C  L  R  T  S  L  *  L  *  Q  N  P  E   : G  L  Q  Q  T  E  S  Y  F  V  S  R  Y  G  T  H  *  W  I  G  C  S  W  S  Y  P  I  T  I  *  L  C  *  C  C  H  Y  H  N  P  Q  V  P  S  W  P  S  W  C  Y  D  F  L  *  E  G  C  *  R  G  *  Q  A  R  Q  G   : G  F  L  R  L  *  R  Q  N  *  P  G  S  L  S  W  T  S  R  W  S  P  Q  S  H  H  H  W  I  G  S  C  L  E  T   : G  H  Y  S  R  I  Q  S  L  P  R  A  S  S  Q  Q  L  R  E  I  C  P   : G  F  R  G  E  G  L  *  T  C  L  W  R  N  *  *  S  L  G  F  G  E  H  E  K  Q   : G  Y  *  W  F  Q  G  *  K  S  L  G  S  C  T  Y  C  S  Q  Q  E  H  R  S  W  R  C  F  C  H  G  P  W  W  H  Q  N  G :   N  S  C  T  H  F  S  G  I  S  *  G  R  F  C  *  S  C  *  F  L  *  C  C  C  E  D  S  S  E  S  K  G  *  N  S  R :   D  K  V  E  R  L  C  I  N  T  R  I  Q  C  S  N  Q  V  *  N  C  K  T  P  S  G  C  G  G  V  C  *  A  V  P  Y  N  W  V  *  E  G  N  H  E  V  Q  K  L  R  G  T  Y  T  R  N  V  I  E  :  A  P  N  I  K  L  Q  K  G  E  R  G  R  K  S  N  H  E  L  L  S  S  T  C  S  H  A  Y  I  L  *  R  N  P  A  H  V  G  S  H  V  C  S  L  Y  I  N  H  L  Q  S  N  *  G  P  F  *  S  N  K  L  L  L  P  L  L </first_frame>
            <second_frame>  A  M  A  M  A  I  A  L  R  R  L  S  A  T  I  D  K  P  V  K  S  L  Y  N  G  G  S  I  Y  Y  M  :  S  S  L  P  N  E  A  V  Y  D  K  E  K  S  G  V  A  :  W  P  K  Q  L  N  A  P  L  E  V  V  D  P  E  I  A  D  I  I  E  H  E  K  A  R  Q  W  K  :  G  L  E  L  I  P  S  E  N  F  T  S  V  S  V  M  Q  A  V  G  S  V  M  T  N  K  Y  S  E  G  Y  P  G  A  R  Y  Y  G  G  N  E :   Y  I  D  M  A  E  T  L  C  Q  K  R  A  L  E  A  F  R  L  D  P  A  K  W  G   : V  N  V  Q  P  L  S  G  S  P  A  N  F  H  V  Y  T  A  L  L  K  P  H  E  R  I  M  A  L  D  L  P  H  G  G  H  L  S  H  G  Y  Q  :  T  D  T  K  K  I  S  A  V  S  I  F  F  E  T  M  P  Y  R  L  D  E  S  T  G  Y  I  D  Y  D  Q  :  L  E  K  S  A  T  L  F  R  P  K  L  I  V  A  G  A  S  A  Y  A  R  L  Y  D  Y  D  R  I  R  K  :  V  C  N  K  Q  K  A  I  L  L  A  D  M  A  H  I  S  G  L  V  A  A  G  V  I  P  S  P  F  D  Y  A  D  V  V  T  T  T  T  H  K  S  L  R  G  P  R  G  A  M  I  F  Y  R  K  G  V  K  E  V  N  K  Q  G  K  E  :  V  F  Y  D  Y  E  D  K  I  N  Q  A  V  F  P  G  L  Q  G  G  P  H  N  H  T  I  T  G  L  A  V  A  L  K  Q  :  A  T  T  P  E  Y  R  A  Y  Q  E  Q  V  L  S  N  S  A  K  F  A  Q  :  A  L  E  E  K  G  Y  E  L  V  S  G  G  T  D  N  H  L  V  L  V  N  M  K  N  K  :  G  I  D  G  S  R  V  E  K  V  L  E  A  V  H  I  A  A  N  K  N  T  V  P  G  D  V  S  A  M  V  P  G  G  I  R  M   : G  T  P  A  L  T  S  R  G  F  L  E  E  D  F  V  K  V  A  D  F  F  D  A  A  V  K  I  A  V  K  V  K  A  E  T  Q   : G  T  K  L  K  D  F  V  S  T  L  E  S  S  A  P  I  K  S  E  I  A  K  L  R  Q  D  V  E  E  Y  A  K  Q  F  P  T  I  G  F  E  K  E  T  M  K  Y  K  N  *  E  V  H  T  Q  G  T  S  L  R :   H  L  I  S  S  F  R  K  V  K  G  E  E  N  P  T  M  N  C  F  Q  V  H  V  L  M  L  I  Y  C  K  E  I  Q  H  M  L  V  P  M  Y  A  V  C  I  L  I  T  Y  S  P  T  E  V  L  F  K  A  I  N  F  C  Y  L  C   </second_frame>
            <third_frame>   Q  W  L  W  Q  *  L  F  G  G  F  L  L  Q  L  T  S  Q  L  R  V  F  T  M  E  A  L  S  I  T  C :   H  H  C  L  M  K  L  Y  T  T  R  K  N  P  E  *  L :   G  Q  S  N  *  M  L  H  *  R  L  L  I  L  R  L  L  T  L  L  S  M  R  K  H  A  N  G  R :   G  S  N  S  F  H  Q  K  I  S  L  P  F  R  *  C  K  Q  L  D  Q  S  *  L  T  S  T  V  K  D  I  L  V  P  D  T  M  E  E  M   : S  T  *  T  W  Q  K  P  Y  A  R  N  V  L  W  K  H  S  G  W  I  L  Q  N  G  E  :  *  M  C  S  L  Y  Q  D  H  P  L  I  F  M  F  T  L  H  Y  *  N  L  M  R  E  S  W  L  L  I  F  L  M  V  D  I  F  L  M  D  I  R :   L  I  Q  R  R  Y  L  Q  S  L  Y  S  L  R  Q  C  H  T  D  S  M  R  A  L  D  I  L  T  M  T  S :   S  R  K  V  P  H  S  L  G  Q  N  *  L  L  L  V  L  V  P  T  H  V  F  M  T  M  T  E  S  G  R :   F  A  T  N  R  K  L  F  C  *  Q  I  W  H  T  L  V  D  W  L  Q  L  E  L  S  H  H  H  L  T  M  L  M  L  S  L  P  Q  P  T  S  P  F  V  A  L  V  V  L  *  F  F  I  G  R  V  L  K  R  L  T  S  K  A  R  R :   F  S  T  T  M  K  T  K  L  T  R  Q  S  F  L  D  F  K  V  V  P  T  I  T  P  S  L  D  W  Q  L  P  *  N  R :   P  L  L  Q  N  T  E  L  T  K  S  K  F  S  A  T  P  R  N  L  P  R :   L  *  R  R  R  A  M  N  L  S  L  E  E  L  I  I  T  W  F  W  *  T  *  K  T  R :   V  L  M  V  P  G  L  K  K  S  W  K  L  Y  I  L  Q  P  T  R  T  P  F  L  E  M  F  L  P  W  S  L  V  A  S  E  W  :  E  L  L  H  S  L  L  G  D  F  L  R  K  I  L  L  K  L  L  I  S  L  M  L  L  *  R  *  Q  *  K  *  R  L  K  L  K  :  G  Q  S  *  K  T  L  Y  Q  H  *  N  P  V  L  Q  S  S  L  K  L  Q  N  S  V  R  M  W  R  S  M  L  S  S  S  L  Q  L  G  L  R  R  K  P  *  S  T  K  T  K  R  Y  I  H  K  E  R  H  *   : G  T  *  Y  Q  A  S  E  R  *  K  G  K  K  I  Q  P  *  I  A  F  K  Y  M  F  S  C  L  Y  I  V  K  K  S  S  T  C  W  F  P  C  M  Q  F  V  Y  *  S  L  T  V  Q  L  R  S  F  L  K  Q  *  T  F  V  T  F  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60358" stop="60450"/>
                    <exon start="60545" stop="60595"/>
                    <exon start="60686" stop="60772"/>
                    <exon start="61580" stop="61701"/>
                    <exon start="61821" stop="61897"/>
                    <exon start="61986" stop="62110"/>
                    <exon start="62780" stop="62872"/>
                    <exon start="63388" stop="63480"/>
                    <exon start="63599" stop="63796"/>
                    <exon start="63928" stop="64032"/>
                    <exon start="64619" stop="64684"/>
                    <exon start="65130" stop="65207"/>
                    <exon start="65452" stop="65563"/>
                    <exon start="65644" stop="65754"/>
                    <exon start="66132" stop="66280"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1557</number_coding_nucleotides>
                  <number_encoded_amino_acids>519</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AMAMAIALRRLSATIDKPVKSLYNGGSIYYMSSLPNEAVYDKEKSGVAWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYDRIRKVCNKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQVLSNSAKFAQALEEKGYELVSGGTDNHLVLVNMKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEEDFVKVADFFDAAVKIAVKVKAETQGTKLKDFVSTLESSAPIKSEIAKLRQDVEEYAKQFPTIGFEKETMKYKN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66281" stop="66309"/>
                    <exon start="66655" stop="66850"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EVHTQGTSLRHLISSFRKVKGEENPTMNCFQVHVLMLIYCKEIQHMLVPMYAVCILITYSPTEVLFKAINFCYLC</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="65182" e_stop="65207"/>
            <exon e_start="65452" e_stop="65563"/>
            <exon e_start="65644" e_stop="65754"/>
            <exon e_start="66132" e_stop="66283"/>
            <exon e_start="66655" e_stop="66853"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.890" e_score="1.000"/>
          <exon-intron don_prob="0.882" acc_prob="0.963" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="65182" e_stop="65207" e_length="26"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="65208" i_stop="65451" i_length="244"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="65452" e_stop="65563" e_length="112"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.890">
            <gDNA_intron_boundary i_start="65564" i_stop="65643" i_length="80"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="65644" e_stop="65754" e_length="111"/>
          </exon>
          <intron i_serial="3" don_prob="0.882" acc_prob="0.963">
            <gDNA_intron_boundary i_start="65755" i_stop="66131" i_length="377"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="66132" e_stop="66283" e_length="152"/>
          </exon>
          <intron i_serial="4" don_prob="0.990" acc_prob="0.995">
            <gDNA_intron_boundary i_start="66284" i_stop="66654" i_length="371"/>
          </intron>
          <exon e_serial="5" e_score="0.995">
            <gDNA_exon_boundary e_start="66655" e_stop="66853" e_length="199"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65182" stop="65207"/>
              <exon start="65452" stop="65563"/>
              <exon start="65644" stop="65754"/>
              <exon start="66132" stop="66283"/>
              <exon start="66655" stop="66853"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U577517" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGTTTTGGTGAACATGAAAAACAAG : GGTATTGATGGTTCCAGGGTTGAAAAAGTCTTGGAAGCTGTACATATTGCAGCCAACAAGAACACCGTTCCTGGAGATGTTTCTGCCATGGTCCCTGGTGGCATCAGAATGG : GAACTCCTGCACTCACTTCTCGGGGATTTCTTGAGGAAGATTTTGTTAAAGTTGCTGATTTCTTTGATGCTGCTGTGAAGATAGCAGTGAAAGTAAAGGCTGAAACTCAAG : GGACAAAGTTGAAAGACTTTGTATCAACACTAGAATCCAGTGCTCCAATCAAGTCTGAAATTGCAAAACTCCGTCAGGATGTGGAGGAGTATGCTAAGCAGTTCCCTACAATTGGGTTTGAGAAGGAAACCATGAAGTACAAAAACTAAGAG : GCACCTAATATCAAGCTTCAGAAAGGTGAAAGGGGAAGAAAATCCAACCATGAATTGCTTTCAAGTACATGTTCTCATGCTTATATATTGTAAAGAAATCCAGCACATGTTGGTTCCCATGTATGCAGTTTGTATATTAATCACTTACAGTCCAACTGAGGTCCTTTTTAAAGCAATAAACTTTTGTTACCTTTGCTGA</gDNA_template>
            <first_frame> W  F  W  *  T  *  K  T  R :   V  L  M  V  P  G  L  K  K  S  W  K  L  Y  I  L  Q  P  T  R  T  P  F  L  E  M  F  L  P  W  S  L  V  A  S  E  W  :  E  L  L  H  S  L  L  G  D  F  L  R  K  I  L  L  K  L  L  I  S  L  M  L  L  *  R  *  Q  *  K  *  R  L  K  L  K  :  G  Q  S  *  K  T  L  Y  Q  H  *  N  P  V  L  Q  S  S  L  K  L  Q  N  S  V  R  M  W  R  S  M  L  S  S  S  L  Q  L  G  L  R  R  K  P  *  S  T  K  T  K  R :   H  L  I  S  S  F  R  K  V  K  G  E  E  N  P  T  M  N  C  F  Q  V  H  V  L  M  L  I  Y  C  K  E  I  Q  H  M  L  V  P  M  Y  A  V  C  I  L  I  T  Y  S  P  T  E  V  L  F  K  A  I  N  F  C  Y  L  C  * </first_frame>
            <second_frame>  G  F  G  E  H  E  K  Q   : G  Y  *  W  F  Q  G  *  K  S  L  G  S  C  T  Y  C  S  Q  Q  E  H  R  S  W  R  C  F  C  H  G  P  W  W  H  Q  N  G :   N  S  C  T  H  F  S  G  I  S  *  G  R  F  C  *  S  C  *  F  L  *  C  C  C  E  D  S  S  E  S  K  G  *  N  S  R :   D  K  V  E  R  L  C  I  N  T  R  I  Q  C  S  N  Q  V  *  N  C  K  T  P  S  G  C  G  G  V  C  *  A  V  P  Y  N  W  V  *  E  G  N  H  E  V  Q  K  L  R   : G  T  *  Y  Q  A  S  E  R  *  K  G  K  K  I  Q  P  *  I  A  F  K  Y  M  F  S  C  L  Y  I  V  K  K  S  S  T  C  W  F  P  C  M  Q  F  V  Y  *  S  L  T  V  Q  L  R  S  F  L  K  Q  *  T  F  V  T  F  A   </second_frame>
            <third_frame>   V  L  V  N  M  K  N  K  :  G  I  D  G  S  R  V  E  K  V  L  E  A  V  H  I  A  A  N  K  N  T  V  P  G  D  V  S  A  M  V  P  G  G  I  R  M   : G  T  P  A  L  T  S  R  G  F  L  E  E  D  F  V  K  V  A  D  F  F  D  A  A  V  K  I  A  V  K  V  K  A  E  T  Q   : G  T  K  L  K  D  F  V  S  T  L  E  S  S  A  P  I  K  S  E  I  A  K  L  R  Q  D  V  E  E  Y  A  K  Q  F  P  T  I  G  F  E  K  E  T  M  K  Y  K  N  *  E  :  A  P  N  I  K  L  Q  K  G  E  R  G  R  K  S  N  H  E  L  L  S  S  T  C  S  H  A  Y  I  L  *  R  N  P  A  H  V  G  S  H  V  C  S  L  Y  I  N  H  L  Q  S  N  *  G  P  F  *  S  N  K  L  L  L  P  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="+"/>
                <serials PGL_serial="8" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65184" stop="65207"/>
                    <exon start="65452" stop="65563"/>
                    <exon start="65644" stop="65754"/>
                    <exon start="66132" stop="66280"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>393</number_coding_nucleotides>
                  <number_encoded_amino_acids>131</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLVNMKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEEDFVKVADFFDAAVKIAVKVKAETQGTKLKDFVSTLESSAPIKSEIAKLRQDVEEYAKQFPTIGFEKETMKYKN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="+"/>
                <serials PGL_serial="8" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66267" stop="66283"/>
                    <exon start="66655" stop="66853"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>STKTKRHLISSFRKVKGEENPTMNCFQVHVLMLIYCKEIQHMLVPMYAVCILITYSPTEVLFKAINFCYLC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="77292" PGL_stop="72066"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="77292" e_stop="77265"/>
            <exon e_start="77166" e_stop="76921"/>
            <exon e_start="76350" e_stop="76205"/>
            <exon e_start="75609" e_stop="75492"/>
            <exon e_start="74706" e_stop="74515"/>
            <exon e_start="73832" e_stop="73767"/>
            <exon e_start="73682" e_stop="73611"/>
            <exon e_start="73515" e_stop="73294"/>
            <exon e_start="72443" e_stop="72066"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.951" acc_prob="0.908" e_score="0.964"/>
          <exon-intron don_prob="0.997" acc_prob="0.920" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.814" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.943" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.601" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.964">
            <gDNA_exon_boundary e_start="77292" e_stop="77265" e_length="28"/>
          </exon>
          <intron i_serial="1" don_prob="0.951" acc_prob="0.908">
            <gDNA_intron_boundary i_start="77264" i_stop="77167" i_length="98"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="77166" e_stop="76921" e_length="246"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.920">
            <gDNA_intron_boundary i_start="76920" i_stop="76351" i_length="570"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="76350" e_stop="76205" e_length="146"/>
          </exon>
          <intron i_serial="3" don_prob="0.975" acc_prob="0.986">
            <gDNA_intron_boundary i_start="76204" i_stop="75610" i_length="595"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="75609" e_stop="75492" e_length="118"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.814">
            <gDNA_intron_boundary i_start="75491" i_stop="74707" i_length="785"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="74706" e_stop="74515" e_length="192"/>
          </exon>
          <intron i_serial="5" don_prob="0.992" acc_prob="0.943">
            <gDNA_intron_boundary i_start="74514" i_stop="73833" i_length="682"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="73832" e_stop="73767" e_length="66"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.989">
            <gDNA_intron_boundary i_start="73766" i_stop="73683" i_length="84"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="73682" e_stop="73611" e_length="72"/>
          </exon>
          <intron i_serial="7" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="73610" i_stop="73516" i_length="95"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="73515" e_stop="73294" e_length="222"/>
          </exon>
          <intron i_serial="8" don_prob="0.601" acc_prob="0.998">
            <gDNA_intron_boundary i_start="73293" i_stop="72444" i_length="850"/>
          </intron>
          <exon e_serial="9" e_score="0.992">
            <gDNA_exon_boundary e_start="72443" e_stop="72066" e_length="378"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77292" stop="77265"/>
              <exon start="77166" stop="76921"/>
              <exon start="76350" stop="76205"/>
              <exon start="75609" stop="75492"/>
              <exon start="74706" stop="74515"/>
              <exon start="73832" stop="73767"/>
              <exon start="73682" stop="73611"/>
              <exon start="73515" stop="73294"/>
              <exon start="72443" stop="72066"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U564240" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGTTGAGCCAGCTGATGGATTAGCTCCA : GTTTGGAACAATGATGTCCGGTTTTACCGTGTGAATGATTCCTCTGGAAGTCCTATTGCCTACTTCTATTTTGATCCATACTCTCGTCCATCTGAGAAACGTGGCGGTGCTTGGATGGATGAAGTTGTTAGCCGAAGCCGTGTATTATCACGAGATGGTTCGAATGCTAGATTGCCTGTTGCACACATGGTTTGTAATCAGATGCCACCAGTTGGGGATAAACCCAGCCTAATGACATTCCGTGAG : GTTGAGACTGTCTTCCATGAATTTGGACATGCCCTTCAGCATATGCTAACTAAGCAGGATGAGGGTTTGGTTGCTGGCATAAGGGGTGTAGAGTGGGATGCTGTGGAATTGCCATCACAATTCATGGAGAATTGGTGCTATCACAG : GGATACTCTGATGGGTATTGCTAAGCATCATGAAACTGGAGAGACACTCCCAGAAGACATATACAAGAAGCTTCTTGCTGCTAAAACTTTCCGTGCTGGTACCTTAAGTCTTCGGCAG : TTGAGATTTGCTACAGTTGATCTTGAGTTACATGCAAAATATGTTCCGGGTGGTTCGGAATCAATCTATTGTGTTGACCGACGGGTCTCTAAGAAAACCCAAGTGCTTCCTCCACTCCCAGACGATAAGTTCCTTGCCAGTTTCAGTCACATTTTTGCTGGTGGATATGCTGCTGGATACTACAGTTACAAG : TGGGCAGAGGTTTTGTCTGCAGATGCTTTCTCTGCTTTTGAAGATGTTGGACTAGAGAATGAGAAG : GCTGTAAAAGAAACAGGCCAGAGATTCAGGGAGACTGTTCTTGCTCTTGGCGGTGGAAAGGCTCCACTGGAG : GTTTTCGTGCAATTTAGAGGACGGGAACCTTCTCCAGAACCGCTGCTTAGGCATAATGGCCTACTTACCTCTTCTGCATGAAGATTGTTGTAGAACCATTAGAGACAATTGCAACTGTATTTGTTTTCAAGTTATTATAAAGAATTCACTTTAGAACAAAGCATTGCTACTGATTTCTCGTCTCCCTTTATGCCATTTTGAGATCATCATATGCCATATATA : GATTTAGCAAGGAAACAAGTTCATTTGAAAAATCAGTAACAGATACGAAGGAAATTGAGGGATTGCCTGCCACCTCTCTTGGTTTGACTTCACATTGAAGCTCTCTTTGTGGGTGTTCGACAACTAAATTAACATTGATTTCTCTTTTGTGTTCTCTTTGCTGCCTGTAACTGATAACAGGGGCACAAAAATGCTACTGCAGAAGTCGGGCCATGGATGATTACATTTTGGATTTATACAGATTCACAAATACCGACTTCTGTTGGCTTTACTATTTCTGCAAAAACCACGGTAAAAAACTATGAATCCTACCACTTATGTCTCAGAGCAGGAGTTTATCTTGTTTTGAGAGCGGCCGGCGTCAAATCAGAAGGAAAA</gDNA_template>
            <first_frame> C  *  A  S  *  W  I  S  S   : S  L  E  Q  *  C  P  V  L  P  C  E  *  F  L  W  K  S  Y  C  L  L  L  F  *  S  I  L  S  S  I  *  E  T  W  R  C  L  D  G  *  S  C  *  P  K  P  C  I  I  T  R  W  F  E  C  *  I  A  C  C  T  H  G  L  *  S  D  A  T  S  W  G  *  T  Q  P  N  D  I  P  *   : G  *  D  C  L  P  *  I  W  T  C  P  S  A  Y  A  N  *  A  G  *  G  F  G  C  W  H  K  G  C  R  V  G  C  C  G  I  A  I  T  I  H  G  E  L  V  L  S  Q  :  G  Y  S  D  G  Y  C  *  A  S  *  N  W  R  D  T  P  R  R  H  I  Q  E  A  S  C  C  *  N  F  P  C  W  Y  L  K  S  S  A   : V  E  I  C  Y  S  *  S  *  V  T  C  K  I  C  S  G  W  F  G  I  N  L  L  C  *  P  T  G  L  *  E  N  P  S  A  S  S  T  P  R  R  *  V  P  C  Q  F  Q  S  H  F  C  W  W  I  C  C  W  I  L  Q  L  Q   : V  G  R  G  F  V  C  R  C  F  L  C  F  *  R  C  W  T  R  E  *  E   : G  C  K  R  N  R  P  E  I  Q  G  D  C  S  C  S  W  R  W  K  G  S  T  G   : G  F  R  A  I  *  R  T  G  T  F  S  R  T  A  A  *  A  *  W  P  T  Y  L  F  C  M  K  I  V  V  E  P  L  E  T  I  A  T  V  F  V  F  K  L  L  *  R  I  H  F  R  T  K  H  C  Y  *  F  L  V  S  L  Y  A  I  L  R  S  S  Y  A  I  Y   : R  F  S  K  E  T  S  S  F  E  K  S  V  T  D  T  K  E  I  E  G  L  P  A  T  S  L  G  L  T  S  H  *  S  S  L  C  G  C  S  T  T  K  L  T  L  I  S  L  L  C  S  L  C  C  L  *  L  I  T  G  A  Q  K  C  Y  C  R  S  R  A  M  D  D  Y  I  L  D  L  Y  R  F  T  N  T  D  F  C  W  L  Y  Y  F  C  K  N  H  G  K  K  L  *  I  L  P  L  M  S  Q  S  R  S  L  S  C  F  E  S  G  R  R  Q  I  R  R  K  </first_frame>
            <second_frame>  V  E  P  A  D  G  L  A  P  :  V  W  N  N  D  V  R  F  Y  R  V  N  D  S  S  G  S  P  I  A  Y  F  Y  F  D  P  Y  S  R  P  S  E  K  R  G  G  A  W  M  D  E  V  V  S  R  S  R  V  L  S  R  D  G  S  N  A  R  L  P  V  A  H  M  V  C  N  Q  M  P  P  V  G  D  K  P  S  L  M  T  F  R  E  :  V  E  T  V  F  H  E  F  G  H  A  L  Q  H  M  L  T  K  Q  D  E  G  L  V  A  G  I  R  G  V  E  W  D  A  V  E  L  P  S  Q  F  M  E  N  W  C  Y  H  R :   D  T  L  M  G  I  A  K  H  H  E  T  G  E  T  L  P  E  D  I  Y  K  K  L  L  A  A  K  T  F  R  A  G  T  L  S  L  R  Q  :  L  R  F  A  T  V  D  L  E  L  H  A  K  Y  V  P  G  G  S  E  S  I  Y  C  V  D  R  R  V  S  K  K  T  Q  V  L  P  P  L  P  D  D  K  F  L  A  S  F  S  H  I  F  A  G  G  Y  A  A  G  Y  Y  S  Y  K  :  W  A  E  V  L  S  A  D  A  F  S  A  F  E  D  V  G  L  E  N  E  K  :  A  V  K  E  T  G  Q  R  F  R  E  T  V  L  A  L  G  G  G  K  A  P  L  E  :  V  F  V  Q  F  R  G  R  E  P  S  P  E  P  L  L  R  H  N  G  L  L  T  S  S  A  *  R  L  L  *  N  H  *  R  Q  L  Q  L  Y  L  F  S  S  Y  Y  K  E  F  T  L  E  Q  S  I  A  T  D  F  S  S  P  F  M  P  F  *  D  H  H  M  P  Y  I  :  D  L  A  R  K  Q  V  H  L  K  N  Q  *  Q  I  R  R  K  L  R  D  C  L  P  P  L  L  V  *  L  H  I  E  A  L  F  V  G  V  R  Q  L  N  *  H  *  F  L  F  C  V  L  F  A  A  C  N  *  *  Q  G  H  K  N  A  T  A  E  V  G  P  W  M  I  T  F  W  I  Y  T  D  S  Q  I  P  T  S  V  G  F  T  I  S  A  K  T  T  V  K  N  Y  E  S  Y  H  L  C  L  R  A  G  V  Y  L  V  L  R  A  A  G  V  K  S  E  G  K </second_frame>
            <third_frame>   L  S  Q  L  M  D  *  L  Q :   F  G  T  M  M  S  G  F  T  V  *  M  I  P  L  E  V  L  L  P  T  S  I  L  I  H  T  L  V  H  L  R  N  V  A  V  L  G  W  M  K  L  L  A  E  A  V  Y  Y  H  E  M  V  R  M  L  D  C  L  L  H  T  W  F  V  I  R  C  H  Q  L  G  I  N  P  A  *  *  H  S  V  R :   L  R  L  S  S  M  N  L  D  M  P  F  S  I  C  *  L  S  R  M  R  V  W  L  L  A  *  G  V  *  S  G  M  L  W  N  C  H  H  N  S  W  R  I  G  A  I  T   : G  I  L  *  W  V  L  L  S  I  M  K  L  E  R  H  S  Q  K  T  Y  T  R  S  F  L  L  L  K  L  S  V  L  V  P  *  V  F  G  S :   *  D  L  L  Q  L  I  L  S  Y  M  Q  N  M  F  R  V  V  R  N  Q  S  I  V  L  T  D  G  S  L  R  K  P  K  C  F  L  H  S  Q  T  I  S  S  L  P  V  S  V  T  F  L  L  V  D  M  L  L  D  T  T  V  T  S :   G  Q  R  F  C  L  Q  M  L  S  L  L  L  K  M  L  D  *  R  M  R  R :   L  *  K  K  Q  A  R  D  S  G  R  L  F  L  L  L  A  V  E  R  L  H  W  R :   F  S  C  N  L  E  D  G  N  L  L  Q  N  R  C  L  G  I  M  A  Y  L  P  L  L  H  E  D  C  C  R  T  I  R  D  N  C  N  C  I  C  F  Q  V  I  I  K  N  S  L  *  N  K  A  L  L  L  I  S  R  L  P  L  C  H  F  E  I  I  I  C  H  I  * :   I  *  Q  G  N  K  F  I  *  K  I  S  N  R  Y  E  G  N  *  G  I  A  C  H  L  S  W  F  D  F  T  L  K  L  S  L  W  V  F  D  N  *  I  N  I  D  F  S  F  V  F  S  L  L  P  V  T  D  N  R  G  T  K  M  L  L  Q  K  S  G  H  G  *  L  H  F  G  F  I  Q  I  H  K  Y  R  L  L  L  A  L  L  F  L  Q  K  P  R  *  K  T  M  N  P  T  T  Y  V  S  E  Q  E  F  I  L  F  *  E  R  P  A  S  N  Q  K  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="77291" stop="77265"/>
                    <exon start="77166" stop="76921"/>
                    <exon start="76350" stop="76205"/>
                    <exon start="75609" stop="75492"/>
                    <exon start="74706" stop="74515"/>
                    <exon start="73832" stop="73767"/>
                    <exon start="73682" stop="73611"/>
                    <exon start="73515" stop="73435"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>945</number_coding_nucleotides>
                  <number_encoded_amino_acids>315</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VEPADGLAPVWNNDVRFYRVNDSSGSPIAYFYFDPYSRPSEKRGGAWMDEVVSRSRVLSRDGSNARLPVAHMVCNQMPPVGDKPSLMTFREVETVFHEFGHALQHMLTKQDEGLVAGIRGVEWDAVELPSQFMENWCYHRDTLMGIAKHHETGETLPEDIYKKLLAAKTFRAGTLSLRQLRFATVDLELHAKYVPGGSESIYCVDRRVSKKTQVLPPLPDDKFLASFSHIFAGGYAAGYYSYKWAEVLSADAFSAFEDVGLENEKAVKETGQRFRETVLALGGGKAPLEVFVQFRGREPSPEPLLRHNGLLTSSA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72266" stop="72066"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QGHKNATAEVGPWMITFWIYTDSQIPTSVGFTISAKTTVKNYESYHLCLRAGVYLVLRAAGVKSEGK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="81421" PGL_stop="78079"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="81421" e_stop="81082"/>
            <exon e_start="81010" e_stop="80843"/>
            <exon e_start="80289" e_stop="80166"/>
            <exon e_start="79698" e_stop="79622"/>
            <exon e_start="79161" e_stop="79018"/>
            <exon e_start="78918" e_stop="78688"/>
            <exon e_start="78599" e_stop="78509"/>
            <exon e_start="78135" e_stop="78079"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.866" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.591" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.694" acc_prob="0.918" e_score="1.000"/>
          <exon-only e_score="0.965"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="81421" e_stop="81082" e_length="340"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.986">
            <gDNA_intron_boundary i_start="81081" i_stop="81011" i_length="71"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="81010" e_stop="80843" e_length="168"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.866">
            <gDNA_intron_boundary i_start="80842" i_stop="80290" i_length="553"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="80289" e_stop="80166" e_length="124"/>
          </exon>
          <intron i_serial="3" don_prob="0.973" acc_prob="0.000">
            <gDNA_intron_boundary i_start="80165" i_stop="79699" i_length="467"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="79698" e_stop="79622" e_length="77"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.999">
            <gDNA_intron_boundary i_start="79621" i_stop="79162" i_length="460"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="79161" e_stop="79018" e_length="144"/>
          </exon>
          <intron i_serial="5" don_prob="0.591" acc_prob="0.977">
            <gDNA_intron_boundary i_start="79017" i_stop="78919" i_length="99"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="78918" e_stop="78688" e_length="231"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="78687" i_stop="78600" i_length="88"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="78599" e_stop="78509" e_length="91"/>
          </exon>
          <intron i_serial="7" don_prob="0.694" acc_prob="0.918">
            <gDNA_intron_boundary i_start="78508" i_stop="78136" i_length="373"/>
          </intron>
          <exon e_serial="8" e_score="0.965">
            <gDNA_exon_boundary e_start="78135" e_stop="78079" e_length="57"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81421" stop="81082"/>
              <exon start="81010" stop="80843"/>
              <exon start="80289" stop="80166"/>
              <exon start="79698" stop="79622"/>
              <exon start="79161" stop="79018"/>
              <exon start="78918" stop="78688"/>
              <exon start="78599" stop="78509"/>
              <exon start="78135" stop="78079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565226" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GACTCGTTTTTCGCTATCTCGTTCAGCTCGCCTTTGCTTAAGACCCACTTCTACTTTTTCACGTTTATCTACCAAAAACCTACTTCAGTGTCCGTCTTGTCCCCTCTGGTCATCCTCTTTCTCTCTCTGTCTTCACACTTTCCGCAAGTCAACTTCTCCCGGTAAATCCATCACCGTCCGATCATTTTCTCCATCGTCGGCATCCATTTCCGACCATCCTTCTAAAATGTCGATGGCTTCTGATGACAATCCTTTGTTGAAGGACTTTGATTTCCCACCATTCGATGTAATCGAAGCCAAGCACGTCCGTCCTGGAATTCGTGCCTTGCTTAACAAAATA : GAGGAGGAATTGAGCGCTTTGGAGAAGAGTGTGGAGCCTACCTGGCCCAAGCTGGCGGAGCCATTGGAGAAGATCATTGATAGATTGACGGTTGTTTGGGGTGCGGTGAATCATCTCAAGTCCGTCAAAGATAATCCTGAACTTCGTTCCGCTCTTGAAGAAGTTCAG : CCAGAAAAAGTTGCTTTTCAGCTTAAATTGGGTCAGAGTAAGCCAATCTATAATGCATTCAAAGCCATCCGAGAGTCACCTGAGTGGGACTCTTTGAGTGATGCTCGTAAACGAATAGTTGAAT : CGCAAATAAAGGAGGCTGTACTTAGTGGTATCGCTCTTGAGGATGATCAAAGAGAGCAATTTAACAAGATTGAACAG : GATTTAGCAAAGCTATCTCAGAAATTTGATGAAAATGTTTTAGATTCCACCAAGAAGTTTGAAAAATTAATAATAGATAAGAAGGATATTGACGGATTACCTGCCACATCTCTTGGTTTGGCTGCACAGACAGCAGTGTCTAAG : GGGCACGAAAATGCTACTGCAGAAGACGGGCCATGGATCATCACATTGGATGCGCCAAGTTATATGTCTGTGATTCAACATGCAAAGAATAGAACTCTTAGAGAAGAGGTGTACCGTGCTTGTATAAATCGTGCTTCTAGTGGAGACCTTGATAACACTGAGATAATTAACCAAATTCTAAAGCTTAGATTGGAAAAGGCTAAGCTCCTTGGATACAATAACTATGCTGAG : GTAAGCATGGCGATGAAAATGGCCACTGTTGAAAAAGCCGAAGAGCTTTTAGAAAAGCTTCGTAGTGCTTCTTGGGATCCTGCAGTTAAAG : ATTTGGAAGACTTGAAAGATTTCTGTAAAAGTCAAGGTTCTCCAGAAGCTGATGATC</gDNA_template>
            <first_frame> D  S  F  F  A  I  S  F  S  S  P  L  L  K  T  H  F  Y  F  F  T  F  I  Y  Q  K  P  T  S  V  S  V  L  S  P  L  V  I  L  F  L  S  L  S  S  H  F  P  Q  V  N  F  S  R  *  I  H  H  R  P  I  I  F  S  I  V  G  I  H  F  R  P  S  F  *  N  V  D  G  F  *  *  Q  S  F  V  E  G  L  *  F  P  T  I  R  C  N  R  S  Q  A  R  P  S  W  N  S  C  L  A  *  Q  N   : R  G  G  I  E  R  F  G  E  E  C  G  A  Y  L  A  Q  A  G  G  A  I  G  E  D  H  *  *  I  D  G  C  L  G  C  G  E  S  S  Q  V  R  Q  R  *  S  *  T  S  F  R  S  *  R  S  S   : A  R  K  S  C  F  S  A  *  I  G  S  E  *  A  N  L  *  C  I  Q  S  H  P  R  V  T  *  V  G  L  F  E  *  C  S  *  T  N  S  *  I :   A  N  K  G  G  C  T  *  W  Y  R  S  *  G  *  S  K  R  A  I  *  Q  D  *  T   : G  F  S  K  A  I  S  E  I  *  *  K  C  F  R  F  H  Q  E  V  *  K  I  N  N  R  *  E  G  Y  *  R  I  T  C  H  I  S  W  F  G  C  T  D  S  S  V  *   : G  A  R  K  C  Y  C  R  R  R  A  M  D  H  H  I  G  C  A  K  L  Y  V  C  D  S  T  C  K  E  *  N  S  *  R  R  G  V  P  C  L  Y  K  S  C  F  *  W  R  P  *  *  H  *  D  N  *  P  N  S  K  A  *  I  G  K  G  *  A  P  W  I  Q  *  L  C  *   : G  K  H  G  D  E  N  G  H  C  *  K  S  R  R  A  F  R  K  A  S  *  C  F  L  G  S  C  S  *  R :   F  G  R  L  E  R  F  L  *  K  S  R  F  S  R  S  *  *   </first_frame>
            <second_frame>  T  R  F  S  L  S  R  S  A  R  L  C  L  R  P  T  S  T  F  S  R  L  S  T  K  N  L  L  Q  C  P  S  C  P  L  W  S  S  S  F  S  L  C  L  H  T  F  R  K  S  T  S  P  G  K  S  I  T  V  R  S  F  S  P  S  S  A  S  I  S  D  H  P  S  K  M  S  M  A  S  D  D  N  P  L  L  K  D  F  D  F  P  P  F  D  V  I  E  A  K  H  V  R  P  G  I  R  A  L  L  N  K  I  :  E  E  E  L  S  A  L  E  K  S  V  E  P  T  W  P  K  L  A  E  P  L  E  K  I  I  D  R  L  T  V  V  W  G  A  V  N  H  L  K  S  V  K  D  N  P  E  L  R  S  A  L  E  E  V  Q  :  P  E  K  V  A  F  Q  L  K  L  G  Q  S  K  P  I  Y  N  A  F  K  A  I  R  E  S  P  E  W  D  S  L  S  D  A  R  K  R  I  V  E   : S  Q  I  K  E  A  V  L  S  G  I  A  L  E  D  D  Q  R  E  Q  F  N  K  I  E  Q  :  D  L  A  K  L  S  Q  K  F  D  E  N  V  L  D  S  T  K  K  F  E  K  L  I  I  D  K  K  D  I  D  G  L  P  A  T  S  L  G  L  A  A  Q  T  A  V  S  K  :  G  H  E  N  A  T  A  E  D  G  P  W  I  I  T  L  D  A  P  S  Y  M  S  V  I  Q  H  A  K  N  R  T  L  R  E  E  V  Y  R  A  C  I  N  R  A  S  S  G  D  L  D  N  T  E  I  I  N  Q  I  L  K  L  R  L  E  K  A  K  L  L  G  Y  N  N  Y  A  E  :  V  S  M  A  M  K  M  A  T  V  E  K  A  E  E  L  L  E  K  L  R  S  A  S  W  D  P  A  V  K   : D  L  E  D  L  K  D  F  C  K  S  Q  G  S  P  E  A  D  D  </second_frame>
            <third_frame>   L  V  F  R  Y  L  V  Q  L  A  F  A  *  D  P  L  L  L  F  H  V  Y  L  P  K  T  Y  F  S  V  R  L  V  P  S  G  H  P  L  S  L  S  V  F  T  L  S  A  S  Q  L  L  P  V  N  P  S  P  S  D  H  F  L  H  R  R  H  P  F  P  T  I  L  L  K  C  R  W  L  L  M  T  I  L  C  *  R  T  L  I  S  H  H  S  M  *  S  K  P  S  T  S  V  L  E  F  V  P  C  L  T  K  * :   R  R  N  *  A  L  W  R  R  V  W  S  L  P  G  P  S  W  R  S  H  W  R  R  S  L  I  D  *  R  L  F  G  V  R  *  I  I  S  S  P  S  K  I  I  L  N  F  V  P  L  L  K  K  F  S :   Q  K  K  L  L  F  S  L  N  W  V  R  V  S  Q  S  I  M  H  S  K  P  S  E  S  H  L  S  G  T  L  *  V  M  L  V  N  E  *  L  N  :  R  K  *  R  R  L  Y  L  V  V  S  L  L  R  M  I  K  E  S  N  L  T  R  L  N  R :   I  *  Q  S  Y  L  R  N  L  M  K  M  F  *  I  P  P  R  S  L  K  N  *  *  *  I  R  R  I  L  T  D  Y  L  P  H  L  L  V  W  L  H  R  Q  Q  C  L  R :   G  T  K  M  L  L  Q  K  T  G  H  G  S  S  H  W  M  R  Q  V  I  C  L  *  F  N  M  Q  R  I  E  L  L  E  K  R  C  T  V  L  V  *  I  V  L  L  V  E  T  L  I  T  L  R  *  L  T  K  F  *  S  L  D  W  K  R  L  S  S  L  D  T  I  T  M  L  R :   *  A  W  R  *  K  W  P  L  L  K  K  P  K  S  F  *  K  S  F  V  V  L  L  G  I  L  Q  L  K  :  I  W  K  T  *  K  I  S  V  K  V  K  V  L  Q  K  L  M  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81420" stop="81082"/>
                    <exon start="81010" stop="80843"/>
                    <exon start="80289" stop="80166"/>
                    <exon start="79698" stop="79622"/>
                    <exon start="79161" stop="79018"/>
                    <exon start="78918" stop="78688"/>
                    <exon start="78599" stop="78509"/>
                    <exon start="78135" stop="78080"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1230</number_coding_nucleotides>
                  <number_encoded_amino_acids>410</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TRFSLSRSARLCLRPTSTFSRLSTKNLLQCPSCPLWSSSFSLCLHTFRKSTSPGKSITVRSFSPSSASISDHPSKMSMASDDNPLLKDFDFPPFDVIEAKHVRPGIRALLNKIEEELSALEKSVEPTWPKLAEPLEKIIDRLTVVWGAVNHLKSVKDNPELRSALEEVQPEKVAFQLKLGQSKPIYNAFKAIRESPEWDSLSDARKRIVESQIKEAVLSGIALEDDQREQFNKIEQDLAKLSQKFDENVLDSTKKFEKLIIDKKDIDGLPATSLGLAAQTAVSKGHENATAEDGPWIITLDAPSYMSVIQHAKNRTLREEVYRACINRASSGDLDNTEIINQILKLRLEKAKLLGYNNYAEVSMAMKMATVEKAEELLEKLRSASWDPAVKDLEDLKDFCKSQGSPEADD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="83808" PGL_stop="83552"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="83808" e_stop="83552"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.922"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.922">
            <gDNA_exon_boundary e_start="83808" e_stop="83552" e_length="257"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83808" stop="83552"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600503" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTTCGTCTACGAATGGAGCCGACACCCCCTTTGCCGATATCACCCACTTCCGCAGTCTCATTGGGGCTCTACAGTATCTGGTCATTACCCGTCCTGACATCCAGTTTGCTGTCAACTGAGTTGCTCAGCGCATGCATCAACCAAGTGAACATAATTACCATTGTCTAAAACGCATTCTCAGGTACATTTTTTGCACTCTTGGTCGTGGTTTACTCATTTGACCCGGGGACTTGGAGCTTCGGGGGTTCTCAGATTC</gDNA_template>
            <first_frame> S  S  S  T  N  G  A  D  T  P  F  A  D  I  T  H  F  R  S  L  I  G  A  L  Q  Y  L  V  I  T  R  P  D  I  Q  F  A  V  N  *  V  A  Q  R  M  H  Q  P  S  E  H  N  Y  H  C  L  K  R  I  L  R  Y  I  F  C  T  L  G  R  G  L  L  I  *  P  G  D  L  E  L  R  G  F  S  D   </first_frame>
            <second_frame>  L  R  L  R  M  E  P  T  P  P  L  P  I  S  P  T  S  A  V  S  L  G  L  Y  S  I  W  S  L  P  V  L  T  S  S  L  L  S  T  E  L  L  S  A  C  I  N  Q  V  N  I  I  T  I  V  *  N  A  F  S  G  T  F  F  A  L  L  V  V  V  Y  S  F  D  P  G  T  W  S  F  G  G  S  Q  I  </second_frame>
            <third_frame>   F  V  Y  E  W  S  R  H  P  L  C  R  Y  H  P  L  P  Q  S  H  W  G  S  T  V  S  G  H  Y  P  S  *  H  P  V  C  C  Q  L  S  C  S  A  H  A  S  T  K  *  T  *  L  P  L  S  K  T  H  S  Q  V  H  F  L  H  S  W  S  W  F  T  H  L  T  R  G  L  G  A  S  G  V  L  R  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0073P13.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="93897" PGL_stop="87761"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="93897" e_stop="93545"/>
            <exon e_start="93051" e_stop="92535"/>
            <exon e_start="92410" e_stop="91932"/>
            <exon e_start="91830" e_stop="91680"/>
            <exon e_start="91519" e_stop="91448"/>
            <exon e_start="91345" e_stop="91277"/>
            <exon e_start="91078" e_stop="91007"/>
            <exon e_start="90845" e_stop="90667"/>
            <exon e_start="90373" e_stop="90147"/>
            <exon e_start="89789" e_stop="89663"/>
            <exon e_start="89576" e_stop="89508"/>
            <exon e_start="89266" e_stop="89077"/>
            <exon e_start="88819" e_stop="88687"/>
            <exon e_start="88374" e_stop="87761"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.945" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.949" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.282" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.235" e_score="1.000"/>
          <exon-intron don_prob="0.963" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.151" acc_prob="0.941" e_score="1.000"/>
          <exon-intron don_prob="0.946" acc_prob="0.830" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.970" e_score="1.000"/>
          <exon-intron don_prob="0.406" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.840" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.962" acc_prob="0.722" e_score="1.000"/>
          <exon-intron don_prob="0.864" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="93897" e_stop="93545" e_length="353"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.945">
            <gDNA_intron_boundary i_start="93544" i_stop="93052" i_length="493"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="93051" e_stop="92535" e_length="517"/>
          </exon>
          <intron i_serial="2" don_prob="0.980" acc_prob="0.985">
            <gDNA_intron_boundary i_start="92534" i_stop="92411" i_length="124"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="92410" e_stop="91932" e_length="479"/>
          </exon>
          <intron i_serial="3" don_prob="0.952" acc_prob="0.949">
            <gDNA_intron_boundary i_start="91931" i_stop="91831" i_length="101"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="91830" e_stop="91680" e_length="151"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.282">
            <gDNA_intron_boundary i_start="91679" i_stop="91520" i_length="160"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="91519" e_stop="91448" e_length="72"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.235">
            <gDNA_intron_boundary i_start="91447" i_stop="91346" i_length="102"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="91345" e_stop="91277" e_length="69"/>
          </exon>
          <intron i_serial="6" don_prob="0.963" acc_prob="0.986">
            <gDNA_intron_boundary i_start="91276" i_stop="91079" i_length="198"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="91078" e_stop="91007" e_length="72"/>
          </exon>
          <intron i_serial="7" don_prob="0.151" acc_prob="0.941">
            <gDNA_intron_boundary i_start="91006" i_stop="90846" i_length="161"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="90845" e_stop="90667" e_length="179"/>
          </exon>
          <intron i_serial="8" don_prob="0.946" acc_prob="0.830">
            <gDNA_intron_boundary i_start="90666" i_stop="90374" i_length="293"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="90373" e_stop="90147" e_length="227"/>
          </exon>
          <intron i_serial="9" don_prob="0.995" acc_prob="0.970">
            <gDNA_intron_boundary i_start="90146" i_stop="89790" i_length="357"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="89789" e_stop="89663" e_length="127"/>
          </exon>
          <intron i_serial="10" don_prob="0.406" acc_prob="0.993">
            <gDNA_intron_boundary i_start="89662" i_stop="89577" i_length="86"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="89576" e_stop="89508" e_length="69"/>
          </exon>
          <intron i_serial="11" don_prob="0.840" acc_prob="0.997">
            <gDNA_intron_boundary i_start="89507" i_stop="89267" i_length="241"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="89266" e_stop="89077" e_length="190"/>
          </exon>
          <intron i_serial="12" don_prob="0.962" acc_prob="0.722">
            <gDNA_intron_boundary i_start="89076" i_stop="88820" i_length="257"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="88819" e_stop="88687" e_length="133"/>
          </exon>
          <intron i_serial="13" don_prob="0.864" acc_prob="0.992">
            <gDNA_intron_boundary i_start="88686" i_stop="88375" i_length="312"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="88374" e_stop="87761" e_length="614"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93897" stop="93545"/>
              <exon start="93051" stop="92535"/>
              <exon start="92410" stop="91932"/>
              <exon start="91830" stop="91680"/>
              <exon start="91519" stop="91448"/>
              <exon start="91345" stop="91277"/>
              <exon start="91078" stop="91007"/>
              <exon start="90845" stop="90667"/>
              <exon start="90373" stop="90147"/>
              <exon start="89789" stop="89663"/>
              <exon start="89576" stop="89508"/>
              <exon start="89266" stop="89077"/>
              <exon start="88819" stop="88687"/>
              <exon start="88374" stop="87761"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U598313" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTAGTTTAGTTTTTACCTAGTAATGCTTCAAAAATTGAAACCATTGGAAGTCATAAGTCCCAGTTTGCTGGTATCTGCAAAACCTATCTTGTTCCCTCCTACCTATTTTCGCTTTTTAATCAGTTTTTCATTTTAAAATTACAGAAAATCATGAGTTGGAAATTGGATTTTGTAGATAACCAAAGTTTAATGAGATAGGCATAGTCAGGTTTTGAGTTGGGATGACCTGATAGGGCAATTTTCTTCCATGAGAATAGGCTGATGGAAGTAGATAATTGCTGGAACATAAGGTTGGTCAACTGTGTTATCATCTGCCTGGTGATATATATACAATCTGCCTTTGCACAAGAAG : GATTTCTAAGTATTCAGTGCTGTGCTACTGCAAACTTTACGGAACCACGTACCAACTTAAGTTGGATTTCAGATGGAATTTGGTTCCCTGAAAATCAGAGTTGCATATCAAGGCCAGTGTACAAGAGTGAACACTATGAACGAGCTCGATCTTTTAGCTCAGACATTAGTCATAAGTGGTGTTACAGCTTGCCAACCAGGAAAGAGCATGACTATCTAGTAAGAGGTACATTTCTTTCTGTCAAACAAGAGAAGACTCTCCCACATAGTTCTTTTGTTGTTTTGATTGGTGTCACACCAATAGCCACAGTGAAGTCATCTGATGAACTTAAGGTTGAGGGAATTTTTAGAGCTACTAGAAGCTATACAAACTTCTGCCTATTGAAAAAGAAGGGGAATCCTTACATTTCTAAGGTTGAACTCAGACCGATAAATTCAGATTATCTCAAAAAGGAGCCTTCAGAAATACTCAAACTTGTACATAGAGTAGATGCTGGAAATAAGGCTGCGGAAATCAG : GTACCCATATGACCAGTACGATAGAATTTGGAGACCAGCCTCAAATCTAGAATCACAAGTTACTCAAACGCCGCCATCCATTATTAAGCATGTCTTTGCAAGAAAACATAGTTTATTACCTCCTGCATTCGTATTACGAACAGCCCTCACCCATCCAGAGAGATTGGACTTCTTGCATGAAGACCTTGACACAGGATATTATACTTACTCTCTCTTCCTGTACTTTCTAGAGCCCAATGACTCAGTTCAAGCTGGAGAAAGGGTGTTCTATATATACATTAACAACGAAAAGAGACTTAAGGTTGATATACTGGCTAGTGGTTCCAGATACCTGGATGTAGTTCTGAATTTCAGAGCAAATAGGTCTGTCAACCTGACAATGATCAAGGCCTCAAATCTATCTCAATTGGGACCCATTTGTAATGGTTATGAGATTTTAAAGGCTCTTCCTCGTGTTAAAGAAACAGCCACTGAAGAAG : TTGACATAATGGCGAATGTCAAGAAGGAATTATTGCAACAAAACAAAAACAATGAAATATGGAAGAGTTGGTCAGGAGACCCTTGTCTTCCCCTTCCCTGGCCGGGCCTAACTTGTGATCGAGTTAATGGTACTTCAGTCATCACTCAGAT : AGATCTCTCCTCAGGTGGCCTTAGTGGACCTAGCCCTCCTAGCATCCAAAAACTGATGCACCTGAGAAAACT : GAATATCAGCATTAATGGCTCTAGTGGCACAAATTCACTCTTTACATCATACTTCACATACTCTACAAG : ATACTTAAGCAGCAGGATTCATATTAGCAACAAGCTTTCTAGAAGCATAAAAGAATCTAATATTACAACAGA : CAAAGGGATGGCTAATGTTAAACAAAACTCAAGTTCAACACATAAACTTGTGATTGGAGCAGCTGTAGGTACAGCCCTCCTGGTGATCCTTGCAATTGTTATCTCTGTGGTCTGCCTCTTCAAAAGACGAGTAATGGCAGGACCAAAATTTCTTATGAGAAATTACTCGATCACAAGGA : ATGCAGTATACTCAGTACCAAGCATGGATACTACCATGATGAAGTCAATATCCTCCAGGAACTTCAAATTGGAATATATAGAAGCTATTACTCAGAACTACAAAACTTTGATAGGTGAAGGTGGCTTTGGATCCGTTTACCGTGGTACCTTACCTGATGGTGTAGAAGTGGCTGTAAAGGTCAGGTCAGCCACTTCGACTCAGGGAATTCGAGAATTCAATAACGAG : CTTAACCTTCTGTCAGCTATCACACATGAGAACCTGGTCCCTCTTATTGGCTACTGCTGCGAGAATGAACAGCAGATTCTGGTTTATCCATTTATGTCAAACAGCTCCCTACAGGATAGGTTATATG : GAGGAGCAGCAAAAAGGAAGATTCTAGACTGGCCGGCCAGACTTTCCATTGCGTTAGGAGCAGCGAGAG : GTTTGCTGTACCTTCACACATTCTCGGAGCGTTGTCTGATCCATAGGGACGTCAAGTCAAGCAACATACTCTTGGATCAGAGCATGTGTGCCAAGGTTGCTGATTTTGGATTTTCAAAATATGCATCTCAAGAAGGGGATAGTGGTACTTCTTTAGAAGTAAGGGGGACAGCTGGGTACTTGGATCCAGA : GTACTACTCGACCCAACGTCTGTCAGCAAAAAGTGATGTCTTCAGCTTTGGAGTTGTCCTACTGGAAATCCTCACAGGTCGAGAGCCTCTCAATATTAACAAGCCAAGAAATGAGTGGAGCTTGGTTGAATGG : GCGAAACCTCTAATAAGAAGCTCAAGAGTTGAAGAAATTGTGGATCCCACTATCAAGGGAGGGTATCATGGTGAGGCGCTGTGGAGAGTGGTAGAGGTGGCTTTGGCATGCACAGAGACATACTCGACTTACAGACCATGCATGGCGGACATTGTAAGAGAGCTCGAGGATGCATTGATAATAGAAAATAATGCATCAGAATACTTGAAGTCCCTAGACAGCTTTGGAGGATCAAACCGTTTCTCCGTAGAAAGGTCCATTGTCCTTCCACCTATTAAATCTCAAACAGAACCATCCAGTCTCCTCTCAAAACCAGCCCCTCCACAACCAAGGTAAATGCTGTAGAGGAATGGATTTAAACTGATTGCAATAGATAACAGAATTCTTAGAAAAGTGTTTGGAATTTTTGCAAATTACTCCTCAAATTCCTTTTAAGTTAAATCTCGTTAAACTGTTCATTCAGTAGAGCAGATTTTGTTATACATACCAGAGAACAGGAAACAGTGTTGTCAAAGGTGTGCTTAAGCCCCAAAGTGAGGCATACTTTCCTTGCGATTGAGATCTTGAAGACTGATATTTCACTTTATCGTAAAAAAAATTCAATTTCTTTGTCC</gDNA_template>
            <first_frame> F  S  L  V  F  T  *  *  C  F  K  N  *  N  H  W  K  S  *  V  P  V  C  W  Y  L  Q  N  L  S  C  S  L  L  P  I  F  A  F  *  S  V  F  H  F  K  I  T  E  N  H  E  L  E  I  G  F  C  R  *  P  K  F  N  E  I  G  I  V  R  F  *  V  G  M  T  *  *  G  N  F  L  P  *  E  *  A  D  G  S  R  *  L  L  E  H  K  V  G  Q  L  C  Y  H  L  P  G  D  I  Y  T  I  C  L  C  T  R  R :   I  S  K  Y  S  V  L  C  Y  C  K  L  Y  G  T  T  Y  Q  L  K  L  D  F  R  W  N  L  V  P  *  K  S  E  L  H  I  K  A  S  V  Q  E  *  T  L  *  T  S  S  I  F  *  L  R  H  *  S  *  V  V  L  Q  L  A  N  Q  E  R  A  *  L  S  S  K  R  Y  I  S  F  C  Q  T  R  E  D  S  P  T  *  F  F  C  C  F  D  W  C  H  T  N  S  H  S  E  V  I  *  *  T  *  G  *  G  N  F  *  S  Y  *  K  L  Y  K  L  L  P  I  E  K  E  G  E  S  L  H  F  *  G  *  T  Q  T  D  K  F  R  L  S  Q  K  G  A  F  R  N  T  Q  T  C  T  *  S  R  C  W  K  *  G  C  G  N  Q  :  V  P  I  *  P  V  R  *  N  L  E  T  S  L  K  S  R  I  T  S  Y  S  N  A  A  I  H  Y  *  A  C  L  C  K  K  T  *  F  I  T  S  C  I  R  I  T  N  S  P  H  P  S  R  E  I  G  L  L  A  *  R  P  *  H  R  I  L  Y  L  L  S  L  P  V  L  S  R  A  Q  *  L  S  S  S  W  R  K  G  V  L  Y  I  H  *  Q  R  K  E  T  *  G  *  Y  T  G  *  W  F  Q  I  P  G  C  S  S  E  F  Q  S  K  *  V  C  Q  P  D  N  D  Q  G  L  K  S  I  S  I  G  T  H  L  *  W  L  *  D  F  K  G  S  S  S  C  *  R  N  S  H  *  R  S :   *  H  N  G  E  C  Q  E  G  I  I  A  T  K  Q  K  Q  *  N  M  E  E  L  V  R  R  P  L  S  S  P  S  L  A  G  P  N  L  *  S  S  *  W  Y  F  S  H  H  S  D  :  R  S  L  L  R  W  P  *  W  T  *  P  S  *  H  P  K  T  D  A  P  E  K  T  :  E  Y  Q  H  *  W  L  *  W  H  K  F  T  L  Y  I  I  L  H  I  L  Y  K  :  I  L  K  Q  Q  D  S  Y  *  Q  Q  A  F  *  K  H  K  R  I  *  Y  Y  N  R  :  Q  R  D  G  *  C  *  T  K  L  K  F  N  T  *  T  C  D  W  S  S  C  R  Y  S  P  P  G  D  P  C  N  C  Y  L  C  G  L  P  L  Q  K  T  S  N  G  R  T  K  I  S  Y  E  K  L  L  D  H  K  E :   C  S  I  L  S  T  K  H  G  Y  Y  H  D  E  V  N  I  L  Q  E  L  Q  I  G  I  Y  R  S  Y  Y  S  E  L  Q  N  F  D  R  *  R  W  L  W  I  R  L  P  W  Y  L  T  *  W  C  R  S  G  C  K  G  Q  V  S  H  F  D  S  G  N  S  R  I  Q  *  R   : A  *  P  S  V  S  Y  H  T  *  E  P  G  P  S  Y  W  L  L  L  R  E  *  T  A  D  S  G  L  S  I  Y  V  K  Q  L  P  T  G  *  V  I  W :   R  S  S  K  K  E  D  S  R  L  A  G  Q  T  F  H  C  V  R  S  S  E  R :   F  A  V  P  S  H  I  L  G  A  L  S  D  P  *  G  R  Q  V  K  Q  H  T  L  G  S  E  H  V  C  Q  G  C  *  F  W  I  F  K  I  C  I  S  R  R  G  *  W  Y  F  F  R  S  K  G  D  S  W  V  L  G  S  R  :  V  L  L  D  P  T  S  V  S  K  K  *  C  L  Q  L  W  S  C  P  T  G  N  P  H  R  S  R  A  S  Q  Y  *  Q  A  K  K  *  V  E  L  G  *  M   : G  E  T  S  N  K  K  L  K  S  *  R  N  C  G  S  H  Y  Q  G  R  V  S  W  *  G  A  V  E  S  G  R  G  G  F  G  M  H  R  D  I  L  D  L  Q  T  M  H  G  G  H  C  K  R  A  R  G  C  I  D  N  R  K  *  C  I  R  I  L  E  V  P  R  Q  L  W  R  I  K  P  F  L  R  R  K  V  H  C  P  S  T  Y  *  I  S  N  R  T  I  Q  S  P  L  K  T  S  P  S  T  T  K  V  N  A  V  E  E  W  I  *  T  D  C  N  R  *  Q  N  S  *  K  S  V  W  N  F  C  K  L  L  L  K  F  L  L  S  *  I  S  L  N  C  S  F  S  R  A  D  F  V  I  H  T  R  E  Q  E  T  V  L  S  K  V  C  L  S  P  K  V  R  H  T  F  L  A  I  E  I  L  K  T  D  I  S  L  Y  R  K  K  N  S  I  S  L  S </first_frame>
            <second_frame>  L  V  *  F  L  P  S  N  A  S  K  I  E  T  I  G  S  H  K  S  Q  F  A  G  I  C  K  T  Y  L  V  P  S  Y  L  F  S  L  F  N  Q  F  F  I  L  K  L  Q  K  I  M  S  W  K  L  D  F  V  D  N  Q  S  L  M  R  *  A  *  S  G  F  E  L  G  *  P  D  R  A  I  F  F  H  E  N  R  L  M  E  V  D  N  C  W  N  I  R  L  V  N  C  V  I  I  C  L  V  I  Y  I  Q  S  A  F  A  Q  E   : G  F  L  S  I  Q  C  C  A  T  A  N  F  T  E  P  R  T  N  L  S  W  I  S  D  G  I  W  F  P  E  N  Q  S  C  I  S  R  P  V  Y  K  S  E  H  Y  E  R  A  R  S  F  S  S  D  I  S  H  K  W  C  Y  S  L  P  T  R  K  E  H  D  Y  L  V  R  G  T  F  L  S  V  K  Q  E  K  T  L  P  H  S  S  F  V  V  L  I  G  V  T  P  I  A  T  V  K  S  S  D  E  L  K  V  E  G  I  F  R  A  T  R  S  Y  T  N  F  C  L  L  K  K  K  G  N  P  Y  I  S  K  V  E  L  R  P  I  N  S  D  Y  L  K  K  E  P  S  E  I  L  K  L  V  H  R  V  D  A  G  N  K  A  A  E  I  R :   Y  P  Y  D  Q  Y  D  R  I  W  R  P  A  S  N  L  E  S  Q  V  T  Q  T  P  P  S  I  I  K  H  V  F  A  R  K  H  S  L  L  P  P  A  F  V  L  R  T  A  L  T  H  P  E  R  L  D  F  L  H  E  D  L  D  T  G  Y  Y  T  Y  S  L  F  L  Y  F  L  E  P  N  D  S  V  Q  A  G  E  R  V  F  Y  I  Y  I  N  N  E  K  R  L  K  V  D  I  L  A  S  G  S  R  Y  L  D  V  V  L  N  F  R  A  N  R  S  V  N  L  T  M  I  K  A  S  N  L  S  Q  L  G  P  I  C  N  G  Y  E  I  L  K  A  L  P  R  V  K  E  T  A  T  E  E   : V  D  I  M  A  N  V  K  K  E  L  L  Q  Q  N  K  N  N  E  I  W  K  S  W  S  G  D  P  C  L  P  L  P  W  P  G  L  T  C  D  R  V  N  G  T  S  V  I  T  Q  I :   D  L  S  S  G  G  L  S  G  P  S  P  P  S  I  Q  K  L  M  H  L  R  K  L :   N  I  S  I  N  G  S  S  G  T  N  S  L  F  T  S  Y  F  T  Y  S  T  R :   Y  L  S  S  R  I  H  I  S  N  K  L  S  R  S  I  K  E  S  N  I  T  T  D :   K  G  M  A  N  V  K  Q  N  S  S  S  T  H  K  L  V  I  G  A  A  V  G  T  A  L  L  V  I  L  A  I  V  I  S  V  V  C  L  F  K  R  R  V  M  A  G  P  K  F  L  M  R  N  Y  S  I  T  R   : N  A  V  Y  S  V  P  S  M  D  T  T  M  M  K  S  I  S  S  R  N  F  K  L  E  Y  I  E  A  I  T  Q  N  Y  K  T  L  I  G  E  G  G  F  G  S  V  Y  R  G  T  L  P  D  G  V  E  V  A  V  K  V  R  S  A  T  S  T  Q  G  I  R  E  F  N  N  E  :  L  N  L  L  S  A  I  T  H  E  N  L  V  P  L  I  G  Y  C  C  E  N  E  Q  Q  I  L  V  Y  P  F  M  S  N  S  S  L  Q  D  R  L  Y   : G  G  A  A  K  R  K  I  L  D  W  P  A  R  L  S  I  A  L  G  A  A  R   : G  L  L  Y  L  H  T  F  S  E  R  C  L  I  H  R  D  V  K  S  S  N  I  L  L  D  Q  S  M  C  A  K  V  A  D  F  G  F  S  K  Y  A  S  Q  E  G  D  S  G  T  S  L  E  V  R  G  T  A  G  Y  L  D  P  E :   Y  Y  S  T  Q  R  L  S  A  K  S  D  V  F  S  F  G  V  V  L  L  E  I  L  T  G  R  E  P  L  N  I  N  K  P  R  N  E  W  S  L  V  E  W  :  A  K  P  L  I  R  S  S  R  V  E  E  I  V  D  P  T  I  K  G  G  Y  H  G  E  A  L  W  R  V  V  E  V  A  L  A  C  T  E  T  Y  S  T  Y  R  P  C  M  A  D  I  V  R  E  L  E  D  A  L  I  I  E  N  N  A  S  E  Y  L  K  S  L  D  S  F  G  G  S  N  R  F  S  V  E  R  S  I  V  L  P  P  I  K  S  Q  T  E  P  S  S  L  L  S  K  P  A  P  P  Q  P  R  *  M  L  *  R  N  G  F  K  L  I  A  I  D  N  R  I  L  R  K  V  F  G  I  F  A  N  Y  S  S  N  S  F  *  V  K  S  R  *  T  V  H  S  V  E  Q  I  L  L  Y  I  P  E  N  R  K  Q  C  C  Q  R  C  A  *  A  P  K  *  G  I  L  S  L  R  L  R  S  *  R  L  I  F  H  F  I  V  K  K  I  Q  F  L  C   </second_frame>
            <third_frame>   *  F  S  F  Y  L  V  M  L  Q  K  L  K  P  L  E  V  I  S  P  S  L  L  V  S  A  K  P  I  L  F  P  P  T  Y  F  R  F  L  I  S  F  S  F  *  N  Y  R  K  S  *  V  G  N  W  I  L  *  I  T  K  V  *  *  D  R  H  S  Q  V  L  S  W  D  D  L  I  G  Q  F  S  S  M  R  I  G  *  W  K  *  I  I  A  G  T  *  G  W  S  T  V  L  S  S  A  W  *  Y  I  Y  N  L  P  L  H  K  K  :  D  F  *  V  F  S  A  V  L  L  Q  T  L  R  N  H  V  P  T  *  V  G  F  Q  M  E  F  G  S  L  K  I  R  V  A  Y  Q  G  Q  C  T  R  V  N  T  M  N  E  L  D  L  L  A  Q  T  L  V  I  S  G  V  T  A  C  Q  P  G  K  S  M  T  I  *  *  E  V  H  F  F  L  S  N  K  R  R  L  S  H  I  V  L  L  L  F  *  L  V  S  H  Q  *  P  Q  *  S  H  L  M  N  L  R  L  R  E  F  L  E  L  L  E  A  I  Q  T  S  A  Y  *  K  R  R  G  I  L  T  F  L  R  L  N  S  D  R  *  I  Q  I  I  S  K  R  S  L  Q  K  Y  S  N  L  Y  I  E  *  M  L  E  I  R  L  R  K  S   : G  T  H  M  T  S  T  I  E  F  G  D  Q  P  Q  I  *  N  H  K  L  L  K  R  R  H  P  L  L  S  M  S  L  Q  E  N  I  V  Y  Y  L  L  H  S  Y  Y  E  Q  P  S  P  I  Q  R  D  W  T  S  C  M  K  T  L  T  Q  D  I  I  L  T  L  S  S  C  T  F  *  S  P  M  T  Q  F  K  L  E  K  G  C  S  I  Y  T  L  T  T  K  R  D  L  R  L  I  Y  W  L  V  V  P  D  T  W  M  *  F  *  I  S  E  Q  I  G  L  S  T  *  Q  *  S  R  P  Q  I  Y  L  N  W  D  P  F  V  M  V  M  R  F  *  R  L  F  L  V  L  K  K  Q  P  L  K  K  :  L  T  *  W  R  M  S  R  R  N  Y  C  N  K  T  K  T  M  K  Y  G  R  V  G  Q  E  T  L  V  F  P  F  P  G  R  A  *  L  V  I  E  L  M  V  L  Q  S  S  L  R   : *  I  S  P  Q  V  A  L  V  D  L  A  L  L  A  S  K  N  *  C  T  *  E  N   : *  I  S  A  L  M  A  L  V  A  Q  I  H  S  L  H  H  T  S  H  T  L  Q   : D  T  *  A  A  G  F  I  L  A  T  S  F  L  E  A  *  K  N  L  I  L  Q  Q   : T  K  G  W  L  M  L  N  K  T  Q  V  Q  H  I  N  L  *  L  E  Q  L  *  V  Q  P  S  W  *  S  L  Q  L  L  S  L  W  S  A  S  S  K  D  E  *  W  Q  D  Q  N  F  L  *  E  I  T  R  S  Q  G  :  M  Q  Y  T  Q  Y  Q  A  W  I  L  P  *  *  S  Q  Y  P  P  G  T  S  N  W  N  I  *  K  L  L  L  R  T  T  K  L  *  *  V  K  V  A  L  D  P  F  T  V  V  P  Y  L  M  V  *  K  W  L  *  R  S  G  Q  P  L  R  L  R  E  F  E  N  S  I  T  S :   L  T  F  C  Q  L  S  H  M  R  T  W  S  L  L  L  A  T  A  A  R  M  N  S  R  F  W  F  I  H  L  C  Q  T  A  P  Y  R  I  G  Y  M  :  E  E  Q  Q  K  G  R  F  *  T  G  R  P  D  F  P  L  R  *  E  Q  R  E  :  V  C  C  T  F  T  H  S  R  S  V  V  *  S  I  G  T  S  S  Q  A  T  Y  S  W  I  R  A  C  V  P  R  L  L  I  L  D  F  Q  N  M  H  L  K  K  G  I  V  V  L  L  *  K  *  G  G  Q  L  G  T  W  I  Q   : S  T  T  R  P  N  V  C  Q  Q  K  V  M  S  S  A  L  E  L  S  Y  W  K  S  S  Q  V  E  S  L  S  I  L  T  S  Q  E  M  S  G  A  W  L  N  G :   R  N  L  *  *  E  A  Q  E  L  K  K  L  W  I  P  L  S  R  E  G  I  M  V  R  R  C  G  E  W  *  R  W  L  W  H  A  Q  R  H  T  R  L  T  D  H  A  W  R  T  L  *  E  S  S  R  M  H  *  *  *  K  I  M  H  Q  N  T  *  S  P  *  T  A  L  E  D  Q  T  V  S  P  *  K  G  P  L  S  F  H  L  L  N  L  K  Q  N  H  P  V  S  S  Q  N  Q  P  L  H  N  Q  G  K  C  C  R  G  M  D  L  N  *  L  Q  *  I  T  E  F  L  E  K  C  L  E  F  L  Q  I  T  P  Q  I  P  F  K  L  N  L  V  K  L  F  I  Q  *  S  R  F  C  Y  T  Y  Q  R  T  G  N  S  V  V  K  G  V  L  K  P  Q  S  E  A  Y  F  P  C  D  *  D  L  E  D  *  Y  F  T  L  S  *  K  K  F  N  F  F  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93671" stop="93545"/>
                    <exon start="93051" stop="92535"/>
                    <exon start="92410" stop="91932"/>
                    <exon start="91830" stop="91680"/>
                    <exon start="91519" stop="91448"/>
                    <exon start="91345" stop="91277"/>
                    <exon start="91078" stop="91007"/>
                    <exon start="90845" stop="90667"/>
                    <exon start="90373" stop="90147"/>
                    <exon start="89789" stop="89663"/>
                    <exon start="89576" stop="89508"/>
                    <exon start="89266" stop="89077"/>
                    <exon start="88819" stop="88687"/>
                    <exon start="88374" stop="88039"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>2745</number_coding_nucleotides>
                  <number_encoded_amino_acids>915</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PDRAIFFHENRLMEVDNCWNIRLVNCVIICLVIYIQSAFAQEGFLSIQCCATANFTEPRTNLSWISDGIWFPENQSCISRPVYKSEHYERARSFSSDISHKWCYSLPTRKEHDYLVRGTFLSVKQEKTLPHSSFVVLIGVTPIATVKSSDELKVEGIFRATRSYTNFCLLKKKGNPYISKVELRPINSDYLKKEPSEILKLVHRVDAGNKAAEIRYPYDQYDRIWRPASNLESQVTQTPPSIIKHVFARKHSLLPPAFVLRTALTHPERLDFLHEDLDTGYYTYSLFLYFLEPNDSVQAGERVFYIYINNEKRLKVDILASGSRYLDVVLNFRANRSVNLTMIKASNLSQLGPICNGYEILKALPRVKETATEEVDIMANVKKELLQQNKNNEIWKSWSGDPCLPLPWPGLTCDRVNGTSVITQIDLSSGGLSGPSPPSIQKLMHLRKLNISINGSSGTNSLFTSYFTYSTRYLSSRIHISNKLSRSIKESNITTDKGMANVKQNSSSTHKLVIGAAVGTALLVILAIVISVVCLFKRRVMAGPKFLMRNYSITRNAVYSVPSMDTTMMKSISSRNFKLEYIEAITQNYKTLIGEGGFGSVYRGTLPDGVEVAVKVRSATSTQGIREFNNELNLLSAITHENLVPLIGYCCENEQQILVYPFMSNSSLQDRLYGGAAKRKILDWPARLSIALGAARGLLYLHTFSERCLIHRDVKSSNILLDQSMCAKVADFGFSKYASQEGDSGTSLEVRGTAGYLDPEYYSTQRLSAKSDVFSFGVVLLEILTGREPLNINKPRNEWSLVEWAKPLIRSSRVEEIVDPTIKGGYHGEALWRVVEVALACTETYSTYRPCMADIVRELEDALIIENNASEYLKSLDSFGGSNRFSVERSIVLPPIKSQTEPSSLLSKPAPPQPR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="101022" PGL_stop="110310"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="101022" e_stop="101111"/>
            <exon e_start="101336" e_stop="101397"/>
            <exon e_start="108150" e_stop="108300"/>
            <exon e_start="108368" e_stop="108384"/>
            <exon e_start="108511" e_stop="108594"/>
            <exon e_start="109275" e_stop="109321"/>
            <exon e_start="110065" e_stop="110124"/>
            <exon e_start="110244" e_stop="110310"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.890" e_score="1.000"/>
          <exon-intron don_prob="0.843" acc_prob="0.929" e_score="1.000"/>
          <exon-intron don_prob="0.943" acc_prob="0.914" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.676" e_score="1.000"/>
          <exon-intron don_prob="0.067" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.599" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.353" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="101022" e_stop="101111" e_length="90"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.890">
            <gDNA_intron_boundary i_start="101112" i_stop="101335" i_length="224"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="101336" e_stop="101397" e_length="62"/>
          </exon>
          <intron i_serial="2" don_prob="0.843" acc_prob="0.929">
            <gDNA_intron_boundary i_start="101398" i_stop="108149" i_length="6752"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="108150" e_stop="108300" e_length="151"/>
          </exon>
          <intron i_serial="3" don_prob="0.943" acc_prob="0.914">
            <gDNA_intron_boundary i_start="108301" i_stop="108367" i_length="67"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="108368" e_stop="108384" e_length="17"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.676">
            <gDNA_intron_boundary i_start="108385" i_stop="108510" i_length="126"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="108511" e_stop="108594" e_length="84"/>
          </exon>
          <intron i_serial="5" don_prob="0.067" acc_prob="0.000">
            <gDNA_intron_boundary i_start="108595" i_stop="109274" i_length="680"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="109275" e_stop="109321" e_length="47"/>
          </exon>
          <intron i_serial="6" don_prob="0.988" acc_prob="0.599">
            <gDNA_intron_boundary i_start="109322" i_stop="110064" i_length="743"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="110065" e_stop="110124" e_length="60"/>
          </exon>
          <intron i_serial="7" don_prob="0.988" acc_prob="0.353">
            <gDNA_intron_boundary i_start="110125" i_stop="110243" i_length="119"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="110244" e_stop="110310" e_length="67"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101022" stop="101111"/>
              <exon start="101336" stop="101397"/>
              <exon start="108150" stop="108300"/>
              <exon start="108368" stop="108384"/>
              <exon start="108511" stop="108594"/>
              <exon start="109275" stop="109321"/>
              <exon start="110065" stop="110124"/>
              <exon start="110244" stop="110310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591402" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACTTACTGCATACTCCGCCGGCGGGGTACGCCGCCGGAACTGTCCGATCAAAGCCCTAAGTCAATCTCTCGCACAATATTAGAAGAAAG : GACAAAGATCATGTTATTGACCGCAAGAACTTGTGAGATTTTGGAGAAAGTTCAATTTCATG : TGAGGAGGACCTACTTTGAACACGTGCATATCCTTCTCCATTGCGAGTATTTTCCAGTGGGTTTGGGATTCCTCTGAGTTCCCTTAATCAAATTGAATGCAGGCGATGGTTCATTCAAGCTCTAAGGTTACCTGATGTTTATACAGTGAAG : GTCCTTCAATTTTTTGT : ATATCAATTCAAGATTTGTTTCCAAAGGACCAATACATAAATTACTCAATAACATAACGACGAGTTTTGACAGTGCTTCTGAAA : AGCATGGGGAGTCAAAAGGAGTACACACGACGGAGAGTCAAAAGAAG : TTTTCGTGTATTTTATGCGTTAAACTAACTGATGAGGATCTGGTAGAATTTATTTGACAG : CTTGCTGAGACAGCTGGATCATCAACTGTACCCTATCAGTGAATCAGGTCCTGAATGGCTTGCAGGA</gDNA_template>
            <first_frame> N  L  L  H  T  P  P  A  G  Y  A  A  G  T  V  R  S  K  P  *  V  N  L  S  H  N  I  R  R  K  :  D  K  D  H  V  I  D  R  K  N  L  *  D  F  G  E  S  S  I  S  C :   E  E  D  L  L  *  T  R  A  Y  P  S  P  L  R  V  F  S  S  G  F  G  I  P  L  S  S  L  N  Q  I  E  C  R  R  W  F  I  Q  A  L  R  L  P  D  V  Y  T  V  K  :  V  L  Q  F  F  V :   Y  Q  F  K  I  C  F  Q  R  T  N  T  *  I  T  Q  *  H  N  D  E  F  *  Q  C  F  *  K :   A  W  G  V  K  R  S  T  H  D  G  E  S  K  E   : V  F  V  Y  F  M  R  *  T  N  *  *  G  S  G  R  I  Y  L  T   : A  C  *  D  S  W  I  I  N  C  T  L  S  V  N  Q  V  L  N  G  L  Q   </first_frame>
            <second_frame>  T  Y  C  I  L  R  R  R  G  T  P  P  E  L  S  D  Q  S  P  K  S  I  S  R  T  I  L  E  E  R :   T  K  I  M  L  L  T  A  R  T  C  E  I  L  E  K  V  Q  F  H   : V  R  R  T  Y  F  E  H  V  H  I  L  L  H  C  E  Y  F  P  V  G  L  G  F  L  *  V  P  L  I  K  L  N  A  G  D  G  S  F  K  L  *  G  Y  L  M  F  I  Q  *  R :   S  F  N  F  L   : Y  I  N  S  R  F  V  S  K  G  P  I  H  K  L  L  N  N  I  T  T  S  F  D  S  A  S  E   : K  H  G  E  S  K  G  V  H  T  T  E  S  Q  K  K  :  F  S  C  I  L  C  V  K  L  T  D  E  D  L  V  E  F  I  *  Q  :  L  A  E  T  A  G  S  S  T  V  P  Y  Q  *  I  R  S  *  M  A  C  R  </second_frame>
            <third_frame>   L  T  A  Y  S  A  G  G  V  R  R  R  N  C  P  I  K  A  L  S  Q  S  L  A  Q  Y  *  K  K   : G  Q  R  S  C  Y  *  P  Q  E  L  V  R  F  W  R  K  F  N  F  M  :  *  G  G  P  T  L  N  T  C  I  S  F  S  I  A  S  I  F  Q  W  V  W  D  S  S  E  F  P  *  S  N  *  M  Q  A  M  V  H  S  S  S  K  V  T  *  C  L  Y  S  E   : G  P  S  I  F  C  :  I  S  I  Q  D  L  F  P  K  D  Q  Y  I  N  Y  S  I  T  *  R  R  V  L  T  V  L  L  K  :  S  M  G  S  Q  K  E  Y  T  R  R  R  V  K  R  S :   F  R  V  F  Y  A  L  N  *  L  M  R  I  W  *  N  L  F  D  S :   L  L  R  Q  L  D  H  Q  L  Y  P  I  S  E  S  G  P  E  W  L  A  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="101023" stop="101111"/>
                    <exon start="101336" stop="101397"/>
                    <exon start="108150" stop="108226"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TYCILRRRGTPPELSDQSPKSISRTILEERTKIMLLTARTCEILEKVQFHVRRTYFEHVHILLHCEYFPVGLGFL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108299" stop="108300"/>
                    <exon start="108368" stop="108384"/>
                    <exon start="108511" stop="108594"/>
                    <exon start="109275" stop="109321"/>
                    <exon start="110065" stop="110121"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSFNFLYINSRFVSKGPIHKLLNNITTSFDSASEKHGESKGVHTTESQKKFSCILCVKLTDEDLVEFI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="111058" PGL_stop="120627"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="111058" e_stop="111096"/>
            <exon e_start="111188" e_stop="111262"/>
            <exon e_start="111501" e_stop="111663"/>
            <exon e_start="111913" e_stop="111924"/>
            <exon e_start="112756" e_stop="112886"/>
            <exon e_start="112975" e_stop="113058"/>
            <exon e_start="113577" e_stop="113610"/>
            <exon e_start="120098" e_stop="120627"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.984" acc_prob="0.621" e_score="0.949"/>
          <exon-intron don_prob="0.000" acc_prob="0.996" e_score="0.947"/>
          <exon-intron don_prob="0.000" acc_prob="0.588" e_score="0.963"/>
          <exon-intron don_prob="0.483" acc_prob="0.859" e_score="0.500"/>
          <exon-intron don_prob="0.906" acc_prob="0.998" e_score="0.985"/>
          <exon-intron don_prob="0.000" acc_prob="0.789" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.952" e_score="1.000"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.949">
            <gDNA_exon_boundary e_start="111058" e_stop="111096" e_length="39"/>
          </exon>
          <intron i_serial="1" don_prob="0.984" acc_prob="0.621">
            <gDNA_intron_boundary i_start="111097" i_stop="111187" i_length="91"/>
          </intron>
          <exon e_serial="2" e_score="0.947">
            <gDNA_exon_boundary e_start="111188" e_stop="111262" e_length="75"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="111263" i_stop="111500" i_length="238"/>
          </intron>
          <exon e_serial="3" e_score="0.963">
            <gDNA_exon_boundary e_start="111501" e_stop="111663" e_length="163"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.588">
            <gDNA_intron_boundary i_start="111664" i_stop="111912" i_length="249"/>
          </intron>
          <exon e_serial="4" e_score="0.500">
            <gDNA_exon_boundary e_start="111913" e_stop="111924" e_length="12"/>
          </exon>
          <intron i_serial="4" don_prob="0.483" acc_prob="0.859">
            <gDNA_intron_boundary i_start="111925" i_stop="112755" i_length="831"/>
          </intron>
          <exon e_serial="5" e_score="0.985">
            <gDNA_exon_boundary e_start="112756" e_stop="112886" e_length="131"/>
          </exon>
          <intron i_serial="5" don_prob="0.906" acc_prob="0.998">
            <gDNA_intron_boundary i_start="112887" i_stop="112974" i_length="88"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="112975" e_stop="113058" e_length="84"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.789">
            <gDNA_intron_boundary i_start="113059" i_stop="113576" i_length="518"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="113577" e_stop="113610" e_length="34"/>
          </exon>
          <intron i_serial="7" don_prob="0.975" acc_prob="0.952">
            <gDNA_intron_boundary i_start="113611" i_stop="120097" i_length="6487"/>
          </intron>
          <exon e_serial="8" e_score="0.989">
            <gDNA_exon_boundary e_start="120098" e_stop="120627" e_length="530"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111058" stop="111096"/>
              <exon start="111188" stop="111262"/>
              <exon start="111501" stop="111663"/>
              <exon start="111913" stop="111924"/>
              <exon start="112756" stop="112886"/>
              <exon start="112975" stop="113058"/>
              <exon start="113577" stop="113610"/>
              <exon start="120098" stop="120627"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U578030" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCGTCTTTGATTCACCAGCTAACTTGAGGACAATTCAG : TGGGGATTTCTCCAAGTTCCCTTAACAAATTGAATGCAAGCATAGGGGCATTCAAGCTTTCAGGATACATCTCAG : GTATCAATTCAAGATTTGTTACCAAAAAGGACCAGTACAAGAATCACTTAATAACATAGCTATGAGTTTGGAAAGTGCTTCTGACATTGAGCAGCGAAGTAGATATATTAACTGTTTTTGTTGAATCTAAACTACCCAAGATAAATTTTTTTTGATCCGACTT : GGTAGAGGGTTG : ATGATATGCATGCTTTCCCTGCAAGCTTTGGCCTTAAAGGAGAGGCTCTGGGCTCCACTTCTGACATTTCTTTGTTGGAAATTGTTACTAAAAGTCACGGGAGGCCAGATGGATATCGTAATTTTTTGAAG : GGCAGATTTTGTAGACAAGATGTTGGTGCAACAGGGAATTAATGTATAAGCCTATCTCACACAGGAGTTGATTTTTGTTTGCTA : GTATAACGGCCCAAATTGATGGATAAAAGATGTG : GAAAAAGAGGTTCAGGCTTAGAGTTGCAAAGCTTCACTTTCTTCCCTGCAGCCAAAGAAACTTACTGGAGAGTGCATTCAGTAGAGAGATTCAATCTTCACAGAATATTCTGTGCAGAAGTGCTTCTGAAAAGCATGATCCGGAGTCCAGATTCCTCTGTCAGAGCAAAAGTTCAAGTCGATCAATTGGCTCTCCTGCTCATTGCACAGCTGGCGTGAACTGGAAATCCAAAAGCTCTGCGCAACCCCTTTCATCTAATATTTTACCTAGAGAGGATGATTTCCTGGATAACAAATTCAGTGCTTCAGTTAGATCCAACTATAAATCTGACTGTGAGGCAGGTTCAGGATGGGAGGATATGATTTTCAAACAATTGTAGCTGGCAGTTCTAGAGAGGATGCTTATTTAGGGTATCACTTGAACTTGATGACAGTTCAAATGTGATGCATGAGAGAAGGAAAACATTTATTTGGAGCTGTTCTTAATTTGCACAGAAGCCTGAAACGTGATGGATCATCTCTTGATTGTGA</gDNA_template>
            <first_frame> S  V  F  D  S  P  A  N  L  R  T  I  Q  :  W  G  F  L  Q  V  P  L  T  N  *  M  Q  A  *  G  H  S  S  F  Q  D  T  S  Q  :  V  S  I  Q  D  L  L  P  K  R  T  S  T  R  I  T  *  *  H  S  Y  E  F  G  K  C  F  *  H  *  A  A  K  *  I  Y  *  L  F  L  L  N  L  N  Y  P  R  *  I  F  F  D  P  T   : W  *  R  V   : D  D  M  H  A  F  P  A  S  F  G  L  K  G  E  A  L  G  S  T  S  D  I  S  L  L  E  I  V  T  K  S  H  G  R  P  D  G  Y  R  N  F  L  K  :  G  R  F  C  R  Q  D  V  G  A  T  G  N  *  C  I  S  L  S  H  T  G  V  D  F  C  L  L  :  V  *  R  P  K  L  M  D  K  R  C   : G  K  R  G  S  G  L  E  L  Q  S  F  T  F  F  P  A  A  K  E  T  Y  W  R  V  H  S  V  E  R  F  N  L  H  R  I  F  C  A  E  V  L  L  K  S  M  I  R  S  P  D  S  S  V  R  A  K  V  Q  V  D  Q  L  A  L  L  L  I  A  Q  L  A  *  T  G  N  P  K  A  L  R  N  P  F  H  L  I  F  Y  L  E  R  M  I  S  W  I  T  N  S  V  L  Q  L  D  P  T  I  N  L  T  V  R  Q  V  Q  D  G  R  I  *  F  S  N  N  C  S  W  Q  F  *  R  G  C  L  F  R  V  S  L  E  L  D  D  S  S  N  V  M  H  E  R  R  K  T  F  I  W  S  C  S  *  F  A  Q  K  P  E  T  *  W  I  I  S  *  L  * </first_frame>
            <second_frame>  P  S  L  I  H  Q  L  T  *  G  Q  F  S :   G  D  F  S  K  F  P  *  Q  I  E  C  K  H  R  G  I  Q  A  F  R  I  H  L  R :   Y  Q  F  K  I  C  Y  Q  K  G  P  V  Q  E  S  L  N  N  I  A  M  S  L  E  S  A  S  D  I  E  Q  R  S  R  Y  I  N  C  F  C  *  I  *  T  T  Q  D  K  F  F  L  I  R  L  :  G  R  G  L  :  M  I  C  M  L  S  L  Q  A  L  A  L  K  E  R  L  W  A  P  L  L  T  F  L  C  W  K  L  L  L  K  V  T  G  G  Q  M  D  I  V  I  F  *  R :   A  D  F  V  D  K  M  L  V  Q  Q  G  I  N  V  *  A  Y  L  T  Q  E  L  I  F  V  C  * :   Y  N  G  P  N  *  W  I  K  D  V  :  E  K  E  V  Q  A  *  S  C  K  A  S  L  S  S  L  Q  P  K  K  L  T  G  E  C  I  Q  *  R  D  S  I  F  T  E  Y  S  V  Q  K  C  F  *  K  A  *  S  G  V  Q  I  P  L  S  E  Q  K  F  K  S  I  N  W  L  S  C  S  L  H  S  W  R  E  L  E  I  Q  K  L  C  A  T  P  F  I  *  Y  F  T  *  R  G  *  F  P  G  *  Q  I  Q  C  F  S  *  I  Q  L  *  I  *  L  *  G  R  F  R  M  G  G  Y  D  F  Q  T  I  V  A  G  S  S  R  E  D  A  Y  L  G  Y  H  L  N  L  M  T  V  Q  M  *  C  M  R  E  G  K  H  L  F  G  A  V  L  N  L  H  R  S  L  K  R  D  G  S  S  L  D  C   </second_frame>
            <third_frame>   R  L  *  F  T  S  *  L  E  D  N  S   : V  G  I  S  P  S  S  L  N  K  L  N  A  S  I  G  A  F  K  L  S  G  Y  I  S   : G  I  N  S  R  F  V  T  K  K  D  Q  Y  K  N  H  L  I  T  *  L  *  V  W  K  V  L  L  T  L  S  S  E  V  D  I  L  T  V  F  V  E  S  K  L  P  K  I  N  F  F  *  S  D  L :   V  E  G  * :   *  Y  A  C  F  P  C  K  L  W  P  *  R  R  G  S  G  L  H  F  *  H  F  F  V  G  N  C  Y  *  K  S  R  E  A  R  W  I  S  *  F  F  E   : G  Q  I  L  *  T  R  C  W  C  N  R  E  L  M  Y  K  P  I  S  H  R  S  *  F  L  F  A   : S  I  T  A  Q  I  D  G  *  K  M  W :   K  K  R  F  R  L  R  V  A  K  L  H  F  L  P  C  S  Q  R  N  L  L  E  S  A  F  S  R  E  I  Q  S  S  Q  N  I  L  C  R  S  A  S  E  K  H  D  P  E  S  R  F  L  C  Q  S  K  S  S  S  R  S  I  G  S  P  A  H  C  T  A  G  V  N  W  K  S  K  S  S  A  Q  P  L  S  S  N  I  L  P  R  E  D  D  F  L  D  N  K  F  S  A  S  V  R  S  N  Y  K  S  D  C  E  A  G  S  G  W  E  D  M  I  F  K  Q  L  *  L  A  V  L  E  R  M  L  I  *  G  I  T  *  T  *  *  Q  F  K  C  D  A  *  E  K  E  N  I  Y  L  E  L  F  L  I  C  T  E  A  *  N  V  M  D  H  L  L  I  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="113603" stop="113610"/>
                    <exon start="120098" stop="120476"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>384</number_coding_nucleotides>
                  <number_encoded_amino_acids>128</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KMWKKRFRLRVAKLHFLPCSQRNLLESAFSREIQSSQNILCRSASEKHDPESRFLCQSKSSSRSIGSPAHCTAGVNWKSKSSAQPLSSNILPREDDFLDNKFSASVRSNYKSDCEAGSGWEDMIFKQL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="126508" PGL_stop="128768"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="126508" e_stop="126720"/>
            <exon e_start="126810" e_stop="127087"/>
            <exon e_start="127215" e_stop="127380"/>
            <exon e_start="128725" e_stop="128768"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.981" acc_prob="1.000" e_score="0.995"/>
          <exon-intron don_prob="0.768" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.174" acc_prob="0.986" e_score="0.982"/>
          <exon-only e_score="0.932"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="126508" e_stop="126720" e_length="213"/>
          </exon>
          <intron i_serial="1" don_prob="0.981" acc_prob="1.000">
            <gDNA_intron_boundary i_start="126721" i_stop="126809" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126810" e_stop="127087" e_length="278"/>
          </exon>
          <intron i_serial="2" don_prob="0.768" acc_prob="0.994">
            <gDNA_intron_boundary i_start="127088" i_stop="127214" i_length="127"/>
          </intron>
          <exon e_serial="3" e_score="0.982">
            <gDNA_exon_boundary e_start="127215" e_stop="127380" e_length="166"/>
          </exon>
          <intron i_serial="3" don_prob="0.174" acc_prob="0.986">
            <gDNA_intron_boundary i_start="127381" i_stop="128724" i_length="1344"/>
          </intron>
          <exon e_serial="4" e_score="0.932">
            <gDNA_exon_boundary e_start="128725" e_stop="128768" e_length="44"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126508" stop="126720"/>
              <exon start="126810" stop="127087"/>
              <exon start="127215" stop="127380"/>
              <exon start="128725" stop="128768"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U562898" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGAGCAAGCATAGTGAAGAATAATGAGCCGTCTCCACTGCTTGGAGACATCGATCTTCGCCACCGCAAATCTCTCTCTTTTTCACACACCCTTTTCACCATCTGCAGTTTTACCCATAACTTCTACCAAACCTGCGAGCCTTCTTTTTGAGAATTTCAAGAAATCAGCATCAAGAACACCAACTAGAACAAGTGCCAACAACCCCACAACTA : AGGTGTTGGCTAGTGGTGTATCTACTGCGGCAGTAGATGGAGAAGCTGATGTTGAAGTTGCAGAGGGTTATACAATTACTCAGTTTTGTGATAAAATGATTGATTTGTTCCTAAATGAAAAACCCAAGTCAAAAGATTGGAGAAAATACTTGGTTTTTCGAGAAGAGTGGAAGAAGTACGGGGATAGATTTTACAGTAGGTGTCGAACTCGAGCTGACACAGAAGATGATTCTCAAATGAAGGAAAAGTTAATTAGCTTGGCTAGAAAAGTTAGGAAG : ATTGATGATGAAATGGAAAGGCATACTGAACTTCTCAAAGAGATACAAGATAACCCCAGGGATTTGAATGCAATTGTTACAAAGAGGCGCAAGGACTTCAATGGTGAATTCTTTCGGCATCTGTCTTTGCTTTCAGAAACTTATAACAGCTTGGAGGACCGAGATG : CATTTGCCAGACTTGGGACTAGATGCTTGTCTGCAGTCAGTGCT</gDNA_template>
            <first_frame> L  S  K  H  S  E  E  *  *  A  V  S  T  A  W  R  H  R  S  S  P  P  Q  I  S  L  F  F  T  H  P  F  H  H  L  Q  F  Y  P  *  L  L  P  N  L  R  A  F  F  L  R  I  S  R  N  Q  H  Q  E  H  Q  L  E  Q  V  P  T  T  P  Q  L  :  R  C  W  L  V  V  Y  L  L  R  Q  *  M  E  K  L  M  L  K  L  Q  R  V  I  Q  L  L  S  F  V  I  K  *  L  I  C  S  *  M  K  N  P  S  Q  K  I  G  E  N  T  W  F  F  E  K  S  G  R  S  T  G  I  D  F  T  V  G  V  E  L  E  L  T  Q  K  M  I  L  K  *  R  K  S  *  L  A  W  L  E  K  L  G  R :   L  M  M  K  W  K  G  I  L  N  F  S  K  R  Y  K  I  T  P  G  I  *  M  Q  L  L  Q  R  G  A  R  T  S  M  V  N  S  F  G  I  C  L  C  F  Q  K  L  I  T  A  W  R  T  E  M  :  H  L  P  D  L  G  L  D  A  C  L  Q  S  V   </first_frame>
            <second_frame>  *  A  S  I  V  K  N  N  E  P  S  P  L  L  G  D  I  D  L  R  H  R  K  S  L  S  F  S  H  T  L  F  T  I  C  S  F  T  H  N  F  Y  Q  T  C  E  P  S  F  *  E  F  Q  E  I  S  I  K  N  T  N  *  N  K  C  Q  Q  P  H  N  * :   G  V  G  *  W  C  I  Y  C  G  S  R  W  R  S  *  C  *  S  C  R  G  L  Y  N  Y  S  V  L  *  *  N  D  *  F  V  P  K  *  K  T  Q  V  K  R  L  E  K  I  L  G  F  S  R  R  V  E  E  V  R  G  *  I  L  Q  *  V  S  N  S  S  *  H  R  R  *  F  S  N  E  G  K  V  N  *  L  G  *  K  S  *  E   : D  *  *  *  N  G  K  A  Y  *  T  S  Q  R  D  T  R  *  P  Q  G  F  E  C  N  C  Y  K  E  A  Q  G  L  Q  W  *  I  L  S  A  S  V  F  A  F  R  N  L  *  Q  L  G  G  P  R  C :   I  C  Q  T  W  D  *  M  L  V  C  S  Q  C  </second_frame>
            <third_frame>   E  Q  A  *  *  R  I  M  S  R  L  H  C  L  E  T  S  I  F  A  T  A  N  L  S  L  F  H  T  P  F  S  P  S  A  V  L  P  I  T  S  T  K  P  A  S  L  L  F  E  N  F  K  K  S  A  S  R  T  P  T  R  T  S  A  N  N  P  T  T   : K  V  L  A  S  G  V  S  T  A  A  V  D  G  E  A  D  V  E  V  A  E  G  Y  T  I  T  Q  F  C  D  K  M  I  D  L  F  L  N  E  K  P  K  S  K  D  W  R  K  Y  L  V  F  R  E  E  W  K  K  Y  G  D  R  F  Y  S  R  C  R  T  R  A  D  T  E  D  D  S  Q  M  K  E  K  L  I  S  L  A  R  K  V  R  K  :  I  D  D  E  M  E  R  H  T  E  L  L  K  E  I  Q  D  N  P  R  D  L  N  A  I  V  T  K  R  R  K  D  F  N  G  E  F  F  R  H  L  S  L  L  S  E  T  Y  N  S  L  E  D  R  D   : A  F  A  R  L  G  T  R  C  L  S  A  V  S  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="126525" stop="126720"/>
                    <exon start="126810" stop="127087"/>
                    <exon start="127215" stop="127380"/>
                    <exon start="128725" stop="128768"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>684</number_coding_nucleotides>
                  <number_encoded_amino_acids>228</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RIMSRLHCLETSIFATANLSLFHTPFSPSAVLPITSTKPASLLFENFKKSASRTPTRTSANNPTTKVLASGVSTAAVDGEADVEVAEGYTITQFCDKMIDLFLNEKPKSKDWRKYLVFREEWKKYGDRFYSRCRTRADTEDDSQMKEKLISLARKVRKIDDEMERHTELLKEIQDNPRDLNAIVTKRRKDFNGEFFRHLSLLSETYNSLEDRDAFARLGTRCLSAVSA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="128772" PGL_stop="130817"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="128772" e_stop="128969"/>
            <exon e_start="130309" e_stop="130496"/>
            <exon e_start="130573" e_stop="130817"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.601" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.950" e_score="1.000"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="128772" e_stop="128969" e_length="198"/>
          </exon>
          <intron i_serial="1" don_prob="0.601" acc_prob="0.972">
            <gDNA_intron_boundary i_start="128970" i_stop="130308" i_length="1339"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="130309" e_stop="130496" e_length="188"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.950">
            <gDNA_intron_boundary i_start="130497" i_stop="130572" i_length="76"/>
          </intron>
          <exon e_serial="3" e_score="0.988">
            <gDNA_exon_boundary e_start="130573" e_stop="130817" e_length="245"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="128772" stop="128969"/>
              <exon start="130309" stop="130496"/>
              <exon start="130573" stop="130817"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U598856" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GACAACACACTGGAGATTGTGGGAACATTAGATACTGCCCAGGCCAAATTCGATGACATCTTGAACTCTATGTCAGTGGATGCAGCATGTGACAAGATTAAAAGCCTTGCCAAGAGTAAAGAACTTGACTCTTCTTTGGTGCTGCTGATAAATGGTGCTTGGGCTTCAGCAAAAGAATCCTCTACAATGAGAAATGAG : GTAAAGGAGATAATGCATCGTCTATACAAAGCTACACAGAGTAGTCTAAGGAGCATGGCACCAAAAGAAATAAAGTTGCTCAAGTACCTGCTGAACATCACAGATCCTGAAGAGCGATTCTCAGCATTGGCAACAGCTTTCAGCCCTGGTCATGAACATGATGCCAAGGATCCTAATGCTATATACAC : AAGTCCAAAAGAGTTGCACAAGTGGATCAAAATCATGCTTGATGCATACAACATGAATAAAGAAGAGACTGAAATTAGAGAAGCGAAGCAGTTGGATCAACCTATGGTCATTCAGAGACTTTCCATTCTGAAGGAGACAGTTGAAGCAGAATATTTGGAAAAAGAAGCTAATACAGAAAAAGATTCACAACCAGAAGAAACTGTGATATGACAACCCAGTCCACCGGCGTATCTGTTGTTATGCT</gDNA_template>
            <first_frame> D  N  T  L  E  I  V  G  T  L  D  T  A  Q  A  K  F  D  D  I  L  N  S  M  S  V  D  A  A  C  D  K  I  K  S  L  A  K  S  K  E  L  D  S  S  L  V  L  L  I  N  G  A  W  A  S  A  K  E  S  S  T  M  R  N  E  :  V  K  E  I  M  H  R  L  Y  K  A  T  Q  S  S  L  R  S  M  A  P  K  E  I  K  L  L  K  Y  L  L  N  I  T  D  P  E  E  R  F  S  A  L  A  T  A  F  S  P  G  H  E  H  D  A  K  D  P  N  A  I  Y  T :   S  P  K  E  L  H  K  W  I  K  I  M  L  D  A  Y  N  M  N  K  E  E  T  E  I  R  E  A  K  Q  L  D  Q  P  M  V  I  Q  R  L  S  I  L  K  E  T  V  E  A  E  Y  L  E  K  E  A  N  T  E  K  D  S  Q  P  E  E  T  V  I  *  Q  P  S  P  P  A  Y  L  L  L  C  </first_frame>
            <second_frame>  T  T  H  W  R  L  W  E  H  *  I  L  P  R  P  N  S  M  T  S  *  T  L  C  Q  W  M  Q  H  V  T  R  L  K  A  L  P  R  V  K  N  L  T  L  L  W  C  C  *  *  M  V  L  G  L  Q  Q  K  N  P  L  Q  *  E  M  R :   *  R  R  *  C  I  V  Y  T  K  L  H  R  V  V  *  G  A  W  H  Q  K  K  *  S  C  S  S  T  C  *  T  S  Q  I  L  K  S  D  S  Q  H  W  Q  Q  L  S  A  L  V  M  N  M  M  P  R  I  L  M  L  Y  T   : Q  V  Q  K  S  C  T  S  G  S  K  S  C  L  M  H  T  T  *  I  K  K  R  L  K  L  E  K  R  S  S  W  I  N  L  W  S  F  R  D  F  P  F  *  R  R  Q  L  K  Q  N  I  W  K  K  K  L  I  Q  K  K  I  H  N  Q  K  K  L  *  Y  D  N  P  V  H  R  R  I  C  C  Y  A </second_frame>
            <third_frame>   Q  H  T  G  D  C  G  N  I  R  Y  C  P  G  Q  I  R  *  H  L  E  L  Y  V  S  G  C  S  M  *  Q  D  *  K  P  C  Q  E  *  R  T  *  L  F  F  G  A  A  D  K  W  C  L  G  F  S  K  R  I  L  Y  N  E  K  *   : G  K  G  D  N  A  S  S  I  Q  S  Y  T  E  *  S  K  E  H  G  T  K  R  N  K  V  A  Q  V  P  A  E  H  H  R  S  *  R  A  I  L  S  I  G  N  S  F  Q  P  W  S  *  T  *  C  Q  G  S  *  C  Y  I  H  :  K  S  K  R  V  A  Q  V  D  Q  N  H  A  *  C  I  Q  H  E  *  R  R  D  *  N  *  R  S  E  A  V  G  S  T  Y  G  H  S  E  T  F  H  S  E  G  D  S  *  S  R  I  F  G  K  R  S  *  Y  R  K  R  F  T  T  R  R  N  C  D  M  T  T  Q  S  T  G  V  S  V  V  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0073P13.2" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="128772" stop="128969"/>
                    <exon start="130309" stop="130496"/>
                    <exon start="130573" stop="130783"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>594</number_coding_nucleotides>
                  <number_encoded_amino_acids>198</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DNTLEIVGTLDTAQAKFDDILNSMSVDAACDKIKSLAKSKELDSSLVLLINGAWASAKESSTMRNEVKEIMHRLYKATQSSLRSMAPKEIKLLKYLLNITDPEERFSALATAFSPGHEHDAKDPNAIYTSPKELHKWIKIMLDAYNMNKEETEIREAKQLDQPMVIQRLSILKETVEAEYLEKEANTEKDSQPEETVI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 41 chains have been computed
$ 
$ memory statistics:
$ 47192 bytes spliced alignments in total
$ 21 spliced alignments have been stored
$ 2247 bytes was the average size of a spliced alignment
$ 26280 bytes predicted gene locations in total
$ 16 predicted gene locations have been stored
$ 1642 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 52 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 08:51:00
-->
