<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 08:56:21"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U597410" ref_strand="+" ref_description="SGN-U597410 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157347168|emb|CAO17550.1| (e_value=2e-25) unnamed; (*ATH) AT1G09060.3 (e_value=2e-20)  Symbol: None | similar to transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] (TAIR:At4g00990.1); similar to putative DNA-binding protein PD3, chloroplast [Oryza sativa (japonica cultivar-group)] (GB:XP_468520.1); co... ; ">
      <seq>gattccctgcagaatgatgttggtcctaagatctttctttcttatgggatgtatgaagaacttggtaaaggtgactcagtgaacaatctgcataccaacatgcgtgacctagtattccttttggttcatatcagtgaggtcaaactgaaaggttggcagaagacgaagataggaaagatgcagaaaatctttgctgaatctgatcacaaaggaatttctggcgatgcactaaatgtttcaagcgaaggggatttctccaaattctcgcctgttggcgatagaggggatggtcagtatgctgatacggattcaaatgccaatgaaatgttggtcgacccagagagcagagttacttcccagattggtgtagataacttgagtcatgaagatctgaatggttccagtctaaacagctccgacagtagtcattctggagctctttgggatgtcttccggaggcaggatgtgccgatgcttatcgagtatctaagatttcattggaagaaacacggagattcagaccatgtaacggatgattctgtgccaagtcctctttacgatggaatagtatatctgaatgagcatcataagaaaaagttgaaagagttatttggaattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="+" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="679" stop="3035"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="978" g_stop="1088" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="111" r_length="111" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1089" i_stop="2135" i_length="1047">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.948" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2136" g_stop="2564" g_length="429"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="540" r_length="429" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2565" i_stop="2658" i_length="94">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2659" g_stop="2731" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="541" r_stop="613" r_length="73" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="+" ref_id="SGN-U597410" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U597410" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="978" e_stop="1088"/>
          <exon e_start="2136" e_stop="2564"/>
          <exon e_start="2659" e_stop="2731"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTCCCTGCAGAATGATGTTGGTCCTAAGATCTTTCTTTCTTATGGGATGTATGAAGAACTTGGTAAAGGTGACTCAGTGAACAATCTGCATACCAACATGCGTGACCTAGTGAGTGCCATAATTTCCTTCCCATGCCATCTGTGTCTTCCTATTGTCTTCATATGTTTGATACCTCAATTAGAGAGTTTCTTGTGTTTATCTGAAGTCGAGTCAGTTGATATGCAAAGTGACTTGAATTCCATTATGAGGATGCGTGCATTTTTACTTGGAAATATATTTGCAAATATAATCCTCAAGATGATTTATTTTTTCTGTAGAGTCTAAGATTTTTAGTTGACTGATCCACAAACAATTCGATTGTTTGGTCAATTTGGTATTGATAAGGCATTAACTTGATAACGGAAAAATACCTGATCCTGGCCTTAATGTGTACAAGTAATCAAGAACAAATATTAGTTTAGCTTCTCCTTTGCATGGTTCGGGAATGTGAATAGAAGGTGTGTACAAGCCCCAGTGAGGAGGTGTGAGAGGTTAAATGTCGTTGGCTTAAGGAGAGGCAGAGATATGCTGAAGTGTTGGGAAGAAATGATTAGGCAAGATATGAGTTATGACACAACTTCAGCTTACCGAGGATGTGACCTTAGAAAGGAGGTTATGGAGGTCACATATTAAGGTAGAAGCTTTGTAGGTTGTTGAGCATTGTCTCTCGTTTCCAGGAAGGATAGGCTTGGTGATATTGTGCACCGTACCTATTTCCCCATTTATACCAGCAGTTGTAGCATTTTTCTCGTATTTACCTGTCTTGTGATTTTTGTTGCTCATTATTTTTTGTGCTTCAGTTATCACATTCTTTGGTTATTGTTGTTGCTCTTGTTTTCTGAAAGTTATGTTATGCTTTCCCTATTATATGCTATGTCCTCTGTACGTCTGTATTTTCCTTTTAATTGCTTTGATGTGCTTTACTTGAGCCTAGGGTCTGTGCAAAACAGCCTTTCTACCTCCACGAGGTAGGGTTCAGTTATGTGTACACTCTACCCTCTCAAGATCCCGCTTATGGGACTACATTGGGTTTGTTGTTGTTGTTTGGTCTTAACAGTACAAATCCTGCTTTCATCTGATAAATAATTTAGGTTGCTGTCTCTTCTCTGTAATTAGGTATTCCTTTTGGTTCATATCAGTGAGGTCAAACTGAAAGGTTGGCAGAAGACGAAGATAGGAAAGATGCAGAAAATCTTTGCTGAATCTGATCACAAAGGAATTTCTGGCGATGCACTAAATGTTTCAAGCGAAGGGGATTTCTCCAAATTCTCGCCTGTTGGCGATAGAGGGGATGGTCAGTATGCTGATACGGATTCAAATGCCAATGAAATGTTGGTCGACCCAGAGAGCAGAGTTACTTCCCAGATTGGTGTAGATAACTTGAGTCATGAAGATCTGAATGGTTCCAGTCTAAACAGCTCCGACAGTAGTCATTCTGGAGCTCTTTGGGATGTCTTCCGGAGGCAGGATGTGCCGATGCTTATCGAGTATCTAAGATTTCATTGGAAGAAACACGGAGATTCAGACCATGTAACGGATGATTCTGTAGGTTTACTTCTCAAATGCAATAACTTGTCCAAGTATTTCTCTCTATATATATTGAGGTCATAATATTTGCTTTCAACATTATTGGTCTCAGGTGCCAAGTCCTCTTTACGATGGAATAGTATATCTGAATGAGCATCATAAGAGAAAGTTGAAAGAGTTATTTG</genome_strand>
        <mrna_strand>GATTCCCTGCAGAATGATGTTGGTCCTAAGATCTTTCTTTCTTATGGGATGTATGAAGAACTTGGTAAAGGTGACTCAGTGAACAATCTGCATACCAACATGCGTGACCTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCTTTTGGTTCATATCAGTGAGGTCAAACTGAAAGGTTGGCAGAAGACGAAGATAGGAAAGATGCAGAAAATCTTTGCTGAATCTGATCACAAAGGAATTTCTGGCGATGCACTAAATGTTTCAAGCGAAGGGGATTTCTCCAAATTCTCGCCTGTTGGCGATAGAGGGGATGGTCAGTATGCTGATACGGATTCAAATGCCAATGAAATGTTGGTCGACCCAGAGAGCAGAGTTACTTCCCAGATTGGTGTAGATAACTTGAGTCATGAAGATCTGAATGGTTCCAGTCTAAACAGCTCCGACAGTAGTCATTCTGGAGCTCTTTGGGATGTCTTCCGGAGGCAGGATGTGCCGATGCTTATCGAGTATCTAAGATTTCATTGGAAGAAACACGGAGATTCAGACCATGTAACGGATGATTCT..............................................................................................GTGCCAAGTCCTCTTTACGATGGAATAGTATATCTGAATGAGCATCATAAGAAAAAGTTGAAAGAGTTATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U585918" ref_strand="+" ref_description="SGN-U585918 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|157347168|emb|CAO17550.1| (e_value=1e-41) unnamed; (*ATH) AT1G09060.3 (e_value=1e-35)  Symbol: None | similar to transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] (TAIR:At4g00990.1); similar to putative DNA-binding protein PD3, chloroplast [Oryza sativa (japonica cultivar-group)] (GB:XP_468520.1); co... ; ">
      <seq>ttctagtggatcaccgggctgcaggaattctccacgagtcctttccaagtgaggaatcttcagtccactgtccaattgggccttgattttctttctccagaaagcttaggtgaggctgttagaatggctgaagaaatccgtggccttcctaatactcatgatgcgaagctgcaaatgttggaggtgggaaagatatcactttatgcagcaagctcagccatcaaagaagttcagaagttggttctggatcctaaagttggtcctgagcttggatttgaggatcccaatttgaccgcattggtgtcagagaatttggagaaaatgatgaagagacgtcaggtaccttgaacataaaccagtgcagagaggtttgtatccgagtatgtctgaattcatatgtacagaagaaacagcaaaacccctagggaatgtgcatcggagtacttgattttgttctgctaaatgctagaacgctctcaggggatgtgcattgttaccgcttactttggtctcccataatctcataggttgtagcctgtgatatctatctatctattatcttatgaagaaatcaacagctgtgtgctcccatagtcttgtagtagaagatatcaataggtcttattgtaattgtaatttcataggtggaatgaaacatcaattcaagatagaattttttgatagatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="+" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="2862" stop="5226"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3162" g_stop="3187" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="63" r_length="26" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3188" i_stop="3797" i_length="610">
            <donor d_prob="0.584" d_score="0.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="3798" g_stop="3917" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="183" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="3918" i_stop="3999" i_length="82">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4000" g_stop="4070" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="254" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="4071" i_stop="4492" i_length="422">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="4493" g_stop="4926" g_length="434"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="688" r_length="434" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="+" ref_id="SGN-U585918" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>651</cumulative_length_of_scored_exons>
        <coverage percentage="0.946" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U585918" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3162" e_stop="3187"/>
          <exon e_start="3798" e_stop="3917"/>
          <exon e_start="4000" e_stop="4070"/>
          <exon e_start="4493" e_stop="4926"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCTTTCCAAGTGAGGAATCTTCAGGTTAGTGGACGAGATGAATTTTATGAGTGGTTTGTAAACAACATAGGTTCTCCTCCTCCTCACATGCTCATAAAAGGAACACAATGCAACTGTTTCTCCTGAAAAGTTTTTTGGACACATGAAAGTCAACTATTGGATGGAAATTAAGCTTTGCTAAACCATCCACCCAATCTTGTAGGTTAAAAACCTTAAAAAGTACCTAGCTTAACTGCTGGAGAGGAAGGTCTCTTTTATTTTTATTCTTTTCACTAGATGGAGATATGTTCACCCAGTTAGAGATATGATATTCCTTCTAATCACTAGAGGGCTGCAGAATGTTTGTGTTTTTTCACTAGATATCTGTAATGTTCTGAAGAAATCCCCAAATGCTCCCCTCTTTCAGAACCAGTTCTCCAAGTCCTGGTCAGGTGTATAAGTGGCCCAGATGTTTGTAAAGGAAAGCTCCTGGTGATTTGCAGTCGAAGCTTTTTTTTAGTTAATACTTAATAGATACGTTAAGTTCCTCTTTGAAACCTTATTACTAGAGCCATTTAAGAAGATTTTAAACATAACCTTTTTTAGTGTGCGATTTAGAAAAGTTCTGCTGATTGCTCTTTCTGTTTTATTGCAGTCCACTGTCCAATTGGGCCTTGATTTTCTTTCTCCAGAAAGCTTAGGTGAGGCTGTTAGAATGGCTGAAGAAATCCGTGGCCTTCCTAATACTCATGATGCGAAGCTGCAAATGTTGGAGGTCTGTGTAGTGATTCTTATTCTTTTCCTACCTCAGCTTCATTGGATTGGCATTCTTAACTTTATGCATTCATTTAATACAGGTGGGAAAGATATCACTTTATGCAGCAAGCTCAGCCATCAAAGAAGTTCAGAAGTTGGTTCTGGATCCTAAGTAAGCTGTTTTGCATGTTATTCTTTCTTTATGGCTTCTCTATACTTCCTTGTAAGATAGGATGTCTATGACATTTCTTATGTGGAGGTTCTAGGTTGAGGGGTAGAAAAACTATATTGACTTGTTGAATAAATCCTACTGCTGAGCTATGTATCTGTCAAAGTTGGGGCTGATCTCGACTACTTATACCATCTAGAGGCTTCTAAAGGCCTCTTTGGTTAATTTCAACAGGAATGTACAGTAAACTACAACCATTATAATCCTTCCATAAGTTGTTTCTCCGATTGTTATAGGGATGGATCCATTTGCTTTGGTTACAAAATTTTTAAAACGTAAGCGAAGGTGGAAAGAGAGGGATTTTTTCACTCTCTTTCTGATGAATTCATTTACTATATCATTTCCTTGTGTTATTGTGTGTGCAGAGTTGGTCCTGAGCTTGGATTTGAGGATCCCAATTTGACCGCATTGGTGTCAGAGAATTTGGAGAAAATGATGAAGAGACGTCAGGTACCTTGAACATAAACCAGTGCAGAGAGGTTTGTATCCGAGTATGTCTGAATTCATATGTACAGAAGAAACAGCAAAACCCCTAGGGAATGTGCATCGGAGTACTTGATTTTGTTCTGCTAAATGCTAGAACGCTCTCAGGGGATGTGCATTGTTACCGCTTACTTTGGTCTCCCATAATCTCATAGGTTGTAGCCTGTGATATCTATCTATCTATTATCTTATGAAGAAATCAACAGCTGTGTGCTCCCATAGTCTTGTAGTAGAAGATATCAATAGGTCTTATTGTAATTGTAATTTCATAGGTGGAATGAAACATCAATTCAAGATATCATTTTTTGATAGATAT</genome_strand>
        <mrna_strand>GTCCTTTCCAAGTGAGGAATCTTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACTGTCCAATTGGGCCTTGATTTTCTTTCTCCAGAAAGCTTAGGTGAGGCTGTTAGAATGGCTGAAGAAATCCGTGGCCTTCCTAATACTCATGATGCGAAGCTGCAAATGTTGGAG..................................................................................GTGGGAAAGATATCACTTTATGCAGCAAGCTCAGCCATCAAAGAAGTTCAGAAGTTGGTTCTGGATCCTAA......................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGGTCCTGAGCTTGGATTTGAGGATCCCAATTTGACCGCATTGGTGTCAGAGAATTTGGAGAAAATGATGAAGAGACGTCAGGTACCTTGAACATAAACCAGTGCAGAGAGGTTTGTATCCGAGTATGTCTGAATTCATATGTACAGAAGAAACAGCAAAACCCCTAGGGAATGTGCATCGGAGTACTTGATTTTGTTCTGCTAAATGCTAGAACGCTCTCAGGGGATGTGCATTGTTACCGCTTACTTTGGTCTCCCATAATCTCATAGGTTGTAGCCTGTGATATCTATCTATCTATTATCTTATGAAGAAATCAACAGCTGTGTGCTCCCATAGTCTTGTAGTAGAAGATATCAATAGGTCTTATTGTAATTGTAATTTCATAGGTGGAATGAAACATCAATTCAAGATAGAATTTTTTGATAGATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U585372" ref_strand="+" ref_description="SGN-U585372 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|157330032|emb|CAO43364.1| (e_value=3e-102) unnamed; (*ATH) AT1G61210.1 (e_value=3e-99)  Symbol: None | WD-40 repeat family protein / katanin p80 subunit, putative, contains 5 WD-40 repeats (PF00400); similar to katanin p80 subunit (GI:3005601) (Strongylocentrotus purpuratus) | chr1:22568177-22575571 FORWARD | Aliases: F11P17.7, F11P17_... ; (*SWP) sp|Q8H0T9|KTNB1_ARATH (e_value=6e-89) Katanin p80 WD40 repeat-containing subunit B1 homolog 1 OS=Arabidopsis thaliana GN=At5g23430; ">
      <seq>tttcacaatttccatttccatttctcttcccctttccctttttagctttttcacttttcttcaacaaaatttgattcctaactttctctgtagattttgcactcactctcccttcctttcttcccctctctgtcatccacaatcggaagtttttcttctctctgttgacgacggacggtgacttttgtcggtgcttcttatcttatgctttgttgttttccggcgagttatccgatttgcggtgcagaatggctaatcgtggctacaaattgcaggaatttgtggcgcattcggggaatgtaaactgtttaaggtttgggaagaagacgcgtagacagtttctcactggtggagatgatcagaatgtgaatctttggtccattggtaaaccaacatccaccacgagcctaagtgggcatacgagtccaatagaatctgtagcttttgactcagcagaggttctagtgcttgctggagcttcatcaggtgtaataaagctatgggatctggaagaaacaaaaatggttcgcactcttacgggacacagatcatattgcactgcctgtgaattccatccttttggtgaattttttgcatctggatctatggatactaatcttaagatatgggatataagaaaaaaaggatgcatccacacatacaaaggtcatactcgaggaataagtaccatacgattctcccctgatggccgctgggtggtttctggcggatttgacaatgttgtgaaggtatgggacctaacagctggaaagctcttgcacgactttaagttccatgaagggcacattcgatccatagatttccatccacttgagtttcttttggcaacaggttcagctgaaccgcaccgtgaacttttgggatttggaaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="+" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="13952" stop="21106"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14252" g_stop="14524" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14525" i_stop="15065" i_length="541">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.948" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15066" g_stop="15196" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="404" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15197" i_stop="15873" i_length="677">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15874" g_stop="15991" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="522" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="15992" i_stop="19246" i_length="3255">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.426" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19247" g_stop="19473" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="749" r_length="227" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19474" i_stop="19552" i_length="79">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.787" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19553" g_stop="19655" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="750" r_stop="852" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19656" i_stop="20765" i_length="1110">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.915" a_score="0.95"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="20766" g_stop="20806" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="853" r_stop="894" r_length="42" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="+" ref_id="SGN-U585372" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>893</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U585372" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14252" e_stop="14524"/>
          <exon e_start="15066" e_stop="15196"/>
          <exon e_start="15874" e_stop="15991"/>
          <exon e_start="19247" e_stop="19473"/>
          <exon e_start="19553" e_stop="19655"/>
          <exon e_start="20766" e_stop="20806"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCACAATTTCCATTTCCATTTCTCTTCCCCTTTCCCTTTTTAGCTTTTTCACTTTTCTTCAACAAAATTTGATTCCTAACTTTCTCTGTAGATTTTGCACTCACTCTCCCTTCCTTTCTTCCCCTCTCTGTCATCCACAATCGGAAGTTTTTCTTCTCTCTGTTGACGACGGACGGTGACTTTTGTCGGTGCTTCTTATCTTATGCTTTGTTGTTTTCCGGCGAGTTATCCGATTTGCGGTGCAGAATGGCTAATCGTGGCTACAAATTGCGTATCCTTTTTTTGAATTTTGCTATTCGTTCTATTTATTTTACTTAAATGTGCGTTAAGTTTGAATTTTACTGTGTTGTTATGTTTTCTGTTTGATCTGGGAGTGTTCTATAGAATCTTATAGTTAGCTGCTGAAAATCGAAGTAGGATTTTAGTAACTTAGATAGAAAAAAAAATTGAATTTGATTAGGATTTAGAGAATTTTGTTGGAGTGAGCTGAATAGTTGGATTTTTCTGGTATGATTTACTTTTTGTGCTTTTTTTGGTTTTATTAGTTTTTAGATTTAGCTAAGAGTTGGTGTTGTAGGTGAGTTTTTTGAGGTTTAATGTGTGATGTTGTTTTTAAGTTAAAGTATGTGGAGAAGTGACGAGGGTTGCTCGGATGGTAAACACCTTCTACCTCCAATTATAAGGTTGTGGGTTCGAGTCGCGGGGGAGAAAAAAGGTGGGATTTTTCTGGGAGGGGTTAAAAAAAAGTTGTGTGGAGAAGTATTTAATTTCAGCAATAATTTCTTGTGATTCTTGACTAATGTGAAATATAGAGGAATTTGTGGCGCATTCGGGGAATGTAAACTGTTTAAGGTTTGGGAAGAAGACGCGTAGACAGTTTCTCACTGGTGGAGATGATCAGAATGTGAATCTTTGGTCCATTGGTAAACCAACATCCACCACGGTGAGTTCAAATATCTATTCTTTCCAGTTCTCTTGCATGAGTAATGTTGTTATGCTTTATTGGGATAATTGATTTAGTTTCACAATGAGATCTTTCTTTTTCTGTTAACGTTTAATTCAAATGTAAATGCATTAAATGAGTGATCTATTATGATTATGCCTTCTATGCGGGAAGAGCTGCTGCTGCTGCTTTTGTTGTTGGAGCTTTCTCTAGATAATTAGAGTGGGTGAGGATTGAGGAATGAGGTTTGATGTGCATTTTGGATGTGGTAGAGAATTTGTAAAGTTGTTAATGCTGCCACTTAGATATAAGTGAGGTTATGTTATCATTGTTTCTTTATTGGTGCCTTATAAGAATCTTTACCACTTGAAATACCAGACTGCTGTGGTTCTTTTGGATGATCTGAAACAGGTAACACGTGGATCGTATATTTCAAAATATTATGGTTTATTAATCTAACTAATGTGTTTAGTTGCAACCTTTGGTATGATAAAGAATACAAATATGTGGAAACTGTAAACCTTACGAGTATCGAGTGATGGGTCATTCATCTCTATGAATGCATGAAATTATTTGTTGATTCCCTGTGTTGCAAAGAGCTGACTGCTACATGTTTTTATTTATCTTGAATCACTTTAGTCATATGGGACTGAATAGTCTGGTTTTGTGCTGTTCAGAGCCTAAGTGGGCATACGAGTCCAATAGAATCTGTAGCTTTTGACTCAGCAGAGGTTCTAGTGCTTGCTGGAGCTTCATCAGGTGTAATAAAGCTATGGGATCTGGAAGAAACAAAAAGTAAGTCGATTTATCTTTTTAGCTCTATATATTCTATAAAATGAATACTAGCTTTACTCTTAAAGAATTGCAGCGAAAGTGCTCGCAATACATTCTAAGAATGTGCTCACAATTTTTATTTTATTACATTGCTGCTTTATCCTCTTAAGCATGTGTCCTATTTATTAAATGTTGGTCTTACCTGTGAACTTCTAGCTACGAGAAAGCATCGCCTGAAGTTTCCTCAGCCTGTTGGCTTGATTATTTTGGTGTAAATGAGCTAAGTGTAGTCTTAACTGTAGTATATGTCTTTTTACATAAAAACGGCTAGTTGATTTTATTCCTCGTGCAAAGAAAGTTAACTGCTTCACTATAGTATGATGTACAGTTAATTGCAATTAACACTTACTGCATGGTCATGCATTCATTAACCAACTCCGTATGTAACTGAAAGAGCATCTTTGGATCTTCAGTTACACAAGAAACTTGCTTTATGATTTCAAGATTGACTCCAAGGGCGGATCTGTGTGAAGGCGTACTCCCTCACCGGGAAAATGCACTGTATATCTAAGGTCAAATTTGAATTTTATGAGTATATGTGTTATAATGAACCCCCTTGATGAGTTAAGAAACTTAGCTTAGAAGTTAAGGGGGTTCAACCATTCCCTGGGTCTCTGGTTCTATTCTTGCCCACTGCATTTCTTTTTCCCCTTGTTTTTGCTTTGACTTTCCTCGCAGATTGGGCTCAGCTTGCAGCTGTTTGGGCCTTAAACTCCAACCCAATTGGAAAGCCTCATTATTTTTGGGCTCCATTGGAAACTTTATGCTTCCTACTTTTTTGTTATTTTTCTCTTTTATTATATTTCTCCTACTCAATCTTTGGTTCCAATCTGTTAGGCACACTATTTTTGCCTTTTATTCTTCTTGTCTCTATTGCTCATTTTGTTTCTACATAAAAAAAACCCTTTTATGAACTAATTCCAGGGAACTCTTCTAAAAAATGATGAGTTATTGTTGAACTTGCAATTGAGATAGAAAACTATTTTTTAAAGAAAGGTAAAATTAAGAAATTTAAAAGTTGTGGAGATTCTTTTAACAATATCTATTTAATTGAACTTACTTTTTTTGTTTTTTTGGTATTTCTTTCCTATTTTTTCAATTGTATTTTCGATAGAGGAAAACCGAATTACACTAATTTAAATGAACTAAAAATGACGTTTATTTGACTTCTGAATCTGTATTATAGTATTAGTAACTCATTCCTTACACCTTTTTAAAGAATCTTGACGATATTCAAAGTAATTTATGATTGAATGGACACTAATTTGGAATATTTAAAAAATAAAGTAGAATTCTAGGAGGTGCGACAGGCACTTTGCCATCAATATACTTGGGCATGCCCCTGGAAGTTAATCTAACTTTGATCAACTCAGCTTTAGATGCCCTCCCTACGTGTATGTTATCTCTCTTCCATATACCCCAGTCAAAGGTTGGATAAAATCAGAAGAAACTTCTTGTGGCAAGGCAATAACGAAAGGAAGGGTTTTCATTTGGTCAAATGGAAGAACATTATCAGAAGTAAAGAACAAGGTGGACTAGGTATCAAGAACCTTAAATACCAGAGCAAAGCACTCAAGGTCAAGTGGCTATGGAAGTACCATCAGGAGGACCAAGCCCTCTGGTACAGGGTAATCAGGAGCAAGTATGAGCTACTGAACACATGGGTAACTAAAGAGGTCAAAACCCCCTATGGTATTAGCCTCTGGAAATCCATTAGAATATTCTGGCAGTTTCTCAATAATCAAGTAATCAATTAACTGTCAAAGTTCGAAATGGTAGAAAAACAAGTTTTTGGATTGATATATGGGTGGGTACTGTGAGCCCCTATGGTATTAGCCTCTGGAAATCCATTAGAATATTCTGGCAGTTCCTCAGTAATCAATTAACTCTCAAAGTTCGAAATGGTAGAAAAACAAGTTTTTGGATTGATAAATGGGTGGGTACTGTGAGTCTTAAAGATCTCTTTCCTGACATCTTTGTTTTGGCTCAACAACAAAAGAAAACTGTTGCTGAAATGTGGTCACCACAAGGATGGAATATGATCTTTAGAAGAAACTTGAATGACTGGGAAATTCCCAGAATGATTGAACTTTTCAAACTACTGGAGAGTTTCCAAGGAATCCAACCAGGTGAAGGCTATTTATGGTGGCATGGGCGCAACAAAGGAAGATACAGGCTGAAGGAAGGATATAAACAAACTAGTCTTATGGAGAACCAAGACTTCAAATGGCCATGGGAGCAAATCTGGAGAGTCAAAGTGCCACAAAAAGTGGCATGCTTCACCTGGATGCTAGCCAATGAAGCAGTCCTGACATTGGACAATGTGGCCAAGAGGCATATCTCTATGCAACAGATGCTCCTTATGTGGTAAGGGTACAGAAACAGTAAAACACCTCTTCCTACACTGCAATTTCACTGACCAACTGTGGCAGATTTTCCTTGATCTCAGAGGCATTTCCTGGAGTATGCCTAGTAAGATTGATGAGACTCTTTTCAGTTGGGAGGAGGCTGAAGTTGGGGCTACAAACAGAGAAAGATGGAGGATGATCCCTGCTTGTATATGGTAGAGTATATGGAGAGAGAGAAATGATAGATGTTATGAAATAGGGACAACAACCTGCAGGAAGTCGAGCTTAAATGTATTTTGTTGTTCTGTTTTTGTTGTACAAATGTCTACTCCAATGAGACTGAGTCAATCATAGATGGTTTAGGGTCCATCTAGTTCCTGGTTTAGCATTGGAAGGACTTTAATCTTTTTCTTCTTTTTGTAAATATGGTTTTTCAGTACTAAAGTAGTACTGACTGATATACAAATAGTACTAGTGTCAAAAAATTAAAGTAGAACATTGTGAAGTAAAAGAAAAGAAGTATCAGAAATTTCAATAAGGCTTGATGGAGCAAGGAAAAAGTAGGACAAACACTAAATGGGGAATGAAAAGATAAGTTAATTTATTGGGTTAAGGTTAGTCTTTTCCTTTCCCACTTTGCTCCATTTTTCATTTTGTAATTCGTGCGTGTTTGCTTCTTCACACTTCGAACCTCCTTTAGTGAAAAATCCTGCCTTTGCCATTGATTGACACTAGTTATATTTAACTGAACATCCTTCAAGTGTTTGAATTATCTGCGTGTTAAACAAAATATGTAATCCTATTGTGCTTAAATGAGCAAGTCATATCCAGCTTGACTCCTAATCCGGTAATTGTTCTTGAAGTGTAGTGGTTCGCACTCTTACGGGACACAGATCATATTGCACTGCCTGTGAATTCCATCCTTTTGGTGAATTTTTTGCATCTGGATCTATGGATACTAATCTTAAGATATGGGATATAAGAAAAAAAGGATGCATCCACACATACAAAGGTCATACTCGAGGAATAAGTACCATACGATTCTCCCCTGATGGCCGCTGGGTGGTTTCTGGCGGATTTGACAATGTTGTGAAGGTAATTCCTAAGTTGGCTAAAAAAATGTGGCATTATAGACTCTTTTTTTTCTTGAGTATTAACCTCTATTGGTAGTCAGGTATGGGACCTAACAGCTGGAAAGCTCTTGCACGACTTTAAGTTCCATGAAGGGCACATTCGATCCATAGATTTCCATCCACTTGAGTTTCTTTTGGCAACAGGTACTCCTTTTATTCTGTACCCAATCATAGAAATGGTGCTCTGAACAAATTTATGTCTGGTTTTCTTCCTTCCCTTATCTTTTCTTTTGATGTGAATGATTCTCCTTATCTCTGTCCTTAATCTTTCTTTTGTTTTATTTCATATTTCAGTCACGACTCTACATCTTCTAACACAAGGATCAAATTAACTTAGTGGTTAACATACCACTATAGCTTGTTTGGCCAAGCTACTGAAGGCCAAATATGTCTTCTTCTTTTTCCTTTTTTTTCTTTTTTAAAGAAACTCTTATTTAGAGATTGAAGGTATTTGGCAAAGCTTTTGGTGAAAGAAATAAGTGTTTTTGAGTAGTACTGGAAATTGCTTTTCAGCTTTCAAGCAGAAAGTGGAAAAAATAGCTTCTTCCAATAGTAATTGCTTTTTTTTCTTTTCAGACAAGATTACCCATCTAAACAATATTTACCGAATTGATTAGTTGTGGCTTCCTTTTTTCATAATTTACCACTCAAAAATACTTTTGCAAATTTTCCAAACTTATAACAAAAGAACTTCTCAAATAATTTAGTGAAACACAAACTGCGATTCTTCCTAAGTACTTTCTCGAAAAGGACTTTTGATAAGAAGTACTTCTCAAAAGAAGCTGATTTCGGAAGCTTGGCCAAACATGCTACATGCTTTTTTTACAGACTTGCCAAAAGGTTGTGTTTTTGCCTTCCCTTGTCATAAATAGTGGTACTTGCTTAACTTTTCAATTAGAAAAGAGAATGTGGTCAGTTAAAATGGAGAAATCACGGGAAAAGGTGCATGTTTTAAGCAAAAGGATTTATCTCACTGATTCATTGGGCAGATTATGAGAAGTTCAAACATTTCAAGAGGTGGTAGTGTAGTTGAGAGTGTGAAATGTTTTGAAGAATTATCTTGCTCTCCATTTATTATGGTCCATCTGTGATGGAATTTTAAAGCCAGATCCATCTTAAGATGGCATATTATAGCAGGATCAAATAATGGATTCTTCTAAACACAATAGAGTTTTGTACCTTGCCTCTATCCAAATAATGCTATTTTTTTCTGCTGTCCATGTGATCTTGTTTCAACACTTGAGTTGTTCTCAGGTTCAGCTG-ACCGCACCGTGAACTTTTGGGATTTGGAAACA</genome_strand>
        <mrna_strand>TTTCACAATTTCCATTTCCATTTCTCTTCCCCTTTCCCTTTTTAGCTTTTTCACTTTTCTTCAACAAAATTTGATTCCTAACTTTCTCTGTAGATTTTGCACTCACTCTCCCTTCCTTTCTTCCCCTCTCTGTCATCCACAATCGGAAGTTTTTCTTCTCTCTGTTGACGACGGACGGTGACTTTTGTCGGTGCTTCTTATCTTATGCTTTGTTGTTTTCCGGCGAGTTATCCGATTTGCGGTGCAGAATGGCTAATCGTGGCTACAAATTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATTTGTGGCGCATTCGGGGAATGTAAACTGTTTAAGGTTTGGGAAGAAGACGCGTAGACAGTTTCTCACTGGTGGAGATGATCAGAATGTGAATCTTTGGTCCATTGGTAAACCAACATCCACCACG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCTAAGTGGGCATACGAGTCCAATAGAATCTGTAGCTTTTGACTCAGCAGAGGTTCTAGTGCTTGCTGGAGCTTCATCAGGTGTAATAAAGCTATGGGATCTGGAAGAAACAAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTCGCACTCTTACGGGACACAGATCATATTGCACTGCCTGTGAATTCCATCCTTTTGGTGAATTTTTTGCATCTGGATCTATGGATACTAATCTTAAGATATGGGATATAAGAAAAAAAGGATGCATCCACACATACAAAGGTCATACTCGAGGAATAAGTACCATACGATTCTCCCCTGATGGCCGCTGGGTGGTTTCTGGCGGATTTGACAATGTTGTGAAG...............................................................................GTATGGGACCTAACAGCTGGAAAGCTCTTGCACGACTTTAAGTTCCATGAAGGGCACATTCGATCCATAGATTTCCATCCACTTGAGTTTCTTTTGGCAACAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCAGCTGAACCGCACCGTGAACTTTTGGGATTTGGAAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584973" ref_strand="+" ref_description="SGN-U584973 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>gattaatagcaggcttatggcagataatgattccagagaacgttccgaggcaaaagattctgctggcaagcatggtggagaaaagctagagaaaacttcattgcaaccaccgctgaatagtcgggagaaccgtaatgtgggttcagaaggtaggaaagagttgcatccagttagatttgtgaatggagtggcggtagtgcgaggaaggacgcgcagtttggttgagaggtttgagaaaagagaagggttgaacatagatgatgtccataagctggatgtggtgtctcattctaaaactgaggaaacagatgtatcccctttgccaccttcttgttgtaaagatgaggaactagaaaccttttccacaaaatttgaagaagaaccagaaacatcacctttgacagcttctcgttttaaaacagaggaagcaatgcgccccatgcctctagctcattcgaaagttgaggaaacaaattcatctgctttgccagcttctcaatatgaagttgaggacttagaagcatcccataagccagcttctaaatctaaatctgaggaagtaagaaaaaaccatttaccagcttctcattctgaagctgagaaattagaggcatcccttatgctagcttctcagtttaaatacgaggaagttagagaatcccatttaccagcttcttgctctaaacctgaggaatttgaagcatcccctatcctagcttcacaggttaaatctgaggatgtaaggaagtctcgtttgccaacttctcgttctagaactggggaattaggagcatcctctataccagcttcacagcttaaacctgagaatgtaagaagatcccgtttatcagcttctcgttctaaagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="+" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="22895" stop="24998"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23194" g_stop="23324" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="131" r_length="131" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23325" i_stop="23855" i_length="531">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23856" g_stop="23912" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="188" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23913" i_stop="24018" i_length="106">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24019" g_stop="24698" g_length="680"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="868" r_length="680" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="+" ref_id="SGN-U584973" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>868</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U584973" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23194" e_stop="23324"/>
          <exon e_start="23856" e_stop="23912"/>
          <exon e_start="24019" e_stop="24698"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTAATAGCAGGCTTATGGCAGATAATGATTCCAGAGAACGTTCCGAGGCAAAAGATTCTGCTGGCAAGCATGGTGGAGAAAAGCTAGAGAAAACTTCATTGCAACCACCGCTGAATAGTCGGGAGAACCGTTAGTTCTAAATACTCTTTATTTGAATTGACTTTTGAGCTCTCTATGGTCTGTTTCCGTGTTGTACAGTTTTCTGCATTCTTCCTCGGAGGTTTTCTGCTAATTTTGGGCTGGTGATCTCTATTTTAGTTACAGGTTTTCTTCATCTTAAGGGATTTGCTCATTAAAACTTGCCTTAAAATAAAACATTAAACTACAAGATATTTCTAGTTTGTATTTGACCAGTGTTCAGAATTTTATGGCGAAGTATTGTAAGAATGTTCAAATTTTTATTTTTATTTTTCCTGATCAGTGCTATGATGTGAAATGTTTTTGAAAAGTCAAAATTAGCTAGCGAAATCATGCTGGCTGAAATAATCATTTTCTGCTTTTGCTTGACACTCTGTAAGTTGCTTGTATGCACTTCCTGGTTTGCTTACATTTCAGTTCTTCTTTAGGTTTATAGTTTTGTACTTGGCCTTTTCTTTGCATATATAGATGCATAAGTTAGAAGCATGAAAACAATATTAATTTAATTTCATTATGTTTCAGGTAATGTGGGTTCAGAAGGTAGGAAAGAGTTGCATCCAGTTAGATTTGTGAATGGAGGTTAGTGTCTGATAAAACTATGCTGTAAGAAAAGGAAATTTCAAACAGTCCTTTTTTTTTTTGTACGAGAAAATCCAACATTGTAACTAATGTTTTGTTATGGCAGTGGCGGTAGTGCGAGGAAGGACGCGCAGTTTGGTTGAGAGGTTTGAGAAAAGAGAAGGGTTGAACATAGATGATGTCCATAAGCTGGATGTGGTGTCTCATTCTAAAACTGAGGAAACAGATGTATCCCCTTTGCCACCTTCTTGTTGTAAAGATGAGGAACTAGAAACCTTTTCCACAAAATTTGAAGAAGAACCAGAAACATCACCTTTGACAGCTTCTCGTTTTAAAACAGAGGAAGCAATGCGCCCCATGCCTCTAGCTCATTCGAAAGTTGAGGAAACAAATTCATCTGCTTTGCCAGCTTCTCAATATGAAGTTGAGGACTTAGAAGCATCCCATAAGCCAGCTTCTAAATCTAAATCTGAGGAAGTAAGAAAAAACCATTTACCAGCTTCTCATTCTGAAGCTGAGAAATTAGAGGCATCCCTTATGCTAGCTTCTCAGTTTAAATACGAGGAAGTTAGAGAATCCCATTTACCAGCTTCTTGTTCTAAAGCTGAGGAATTTGAAGCATCCCCTATCCTAGCTTCACAGGTTAAATCTGAGGATGTAAGGAAGTCTCGTTTGCCAACTTCTCGTTCTAGAACTGGGGAATTAGGAGCATCCTCTATACCAGCTTCACAGCTTAAACCTGAGAATGTAAGAAGATCCCGTTTATCAGCTTCTCGTTCTAAAGCT</genome_strand>
        <mrna_strand>GATTAATAGCAGGCTTATGGCAGATAATGATTCCAGAGAACGTTCCGAGGCAAAAGATTCTGCTGGCAAGCATGGTGGAGAAAAGCTAGAGAAAACTTCATTGCAACCACCGCTGAATAGTCGGGAGAACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATGTGGGTTCAGAAGGTAGGAAAGAGTTGCATCCAGTTAGATTTGTGAATGGAG..........................................................................................................TGGCGGTAGTGCGAGGAAGGACGCGCAGTTTGGTTGAGAGGTTTGAGAAAAGAGAAGGGTTGAACATAGATGATGTCCATAAGCTGGATGTGGTGTCTCATTCTAAAACTGAGGAAACAGATGTATCCCCTTTGCCACCTTCTTGTTGTAAAGATGAGGAACTAGAAACCTTTTCCACAAAATTTGAAGAAGAACCAGAAACATCACCTTTGACAGCTTCTCGTTTTAAAACAGAGGAAGCAATGCGCCCCATGCCTCTAGCTCATTCGAAAGTTGAGGAAACAAATTCATCTGCTTTGCCAGCTTCTCAATATGAAGTTGAGGACTTAGAAGCATCCCATAAGCCAGCTTCTAAATCTAAATCTGAGGAAGTAAGAAAAAACCATTTACCAGCTTCTCATTCTGAAGCTGAGAAATTAGAGGCATCCCTTATGCTAGCTTCTCAGTTTAAATACGAGGAAGTTAGAGAATCCCATTTACCAGCTTCTTGCTCTAAACCTGAGGAATTTGAAGCATCCCCTATCCTAGCTTCACAGGTTAAATCTGAGGATGTAAGGAAGTCTCGTTTGCCAACTTCTCGTTCTAGAACTGGGGAATTAGGAGCATCCTCTATACCAGCTTCACAGCTTAAACCTGAGAATGTAAGAAGATCCCGTTTATCAGCTTCTCGTTCTAAAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U585497" ref_strand="+" ref_description="SGN-U585497 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157330031|emb|CAO43363.1| (e_value=4e-47) unnamed; (*ATH) AT1G61210.1 (e_value=3e-42)  Symbol: None | WD-40 repeat family protein / katanin p80 subunit, putative, contains 5 WD-40 repeats (PF00400); similar to katanin p80 subunit (GI:3005601) (Strongylocentrotus purpuratus) | chr1:22568177-22575571 FORWARD | Aliases: F11P17.7, F11P17_... ; (*SWP) sp|Q8H0T9|KTNB1_ARATH (e_value=2e-29) Katanin p80 WD40 repeat-containing subunit B1 homolog 1 OS=Arabidopsis thaliana GN=At5g23430; ">
      <seq>ctgtttctaagtttagaagtggaacaagaacatcccgtttgtcggcttttcgttcaaaagctgaggaagctaaaacatcacgattattagcttctcgttctaaagctgaggaggcacaaacattgcgcctgttgtcttctggttctaatgctgagcaaccacaaatagctcctttgccggatgctaatcagcagatcattgcacggtgtgagccagtgcagaatgatgatatcattattgaagatcttatgcaacgccatgatgtgctgctaaattcgtttagatctcgtttgacaaagctgcaggtagttcgtcactactgggaacggaatgacatcaggggtgcttttgaggccttgaggaagttgtcagattattctgtgcaagctgatgttgtgagtgtcctcgtagataaaatggagattatcactttggatttgttttccttcttgttgcctgtactgttagccttacttgaaactaagatagaaaggcatgcaaatgtttccctggagctgttgttgaaacttattgcagtctttggaccagtagttcgctcagccgcttcagcacgtccatctgttggggttgatcttcatgcagaagcaagaattaagtgctgcaggcagtgctttgcctacctccaagatatacagaaaacacttcctgaacttataaggggagggggtcagccggcaaaaggtgcagtacaattaaatctcctacttcaagaatcatagtccagtttatgatatatgcttttcctaatggctaaagcgagacaacggaatgggaagttagctactatacaatgttctcaaacttatgtctctttatggacacccacaattttgctcctcgggtttccgtccttgctaccattttcaccaaccttgtaacagcggaaaattggcaagatggaaatgcagtgtctgtcctccgccactgcaactgggttgggaggcaaaggtaaaaactctcgacataatatatccttttgttggagagtagcatcgctatcttcattcagatacgcggcttgaacatattcaaagttcctggctgtatgtgtccatccatatgtaagttgtgtacatgtatctgcaatagtaaaaaaaaattggatgagatgtgtacatcatttgatcaatgaaacagagattcatacacacaccttctcttgctatcaaaactcaatattgaatttcttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="+" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="24424" stop="28410"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24724" g_stop="24902" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24903" i_stop="25413" i_length="511">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25414" g_stop="25539" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="305" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25540" i_stop="25793" i_length="254">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25794" g_stop="25868" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="380" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25869" i_stop="25962" i_length="94">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25963" g_stop="26075" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="493" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26076" i_stop="26641" i_length="566">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26642" g_stop="26758" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="494" r_stop="610" r_length="117" r_score="0.991"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="26759" i_stop="26863" i_length="105">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.897" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="26864" g_stop="26932" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="611" r_stop="679" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="26933" i_stop="27575" i_length="643">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="27576" g_stop="28110" g_length="535"/>
          <reference_exon_boundary r_type="cDNA" r_start="680" r_stop="1213" r_length="534" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="+" ref_id="SGN-U585497" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1214</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U585497" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24724" e_stop="24902"/>
          <exon e_start="25414" e_stop="25539"/>
          <exon e_start="25794" e_stop="25868"/>
          <exon e_start="25963" e_stop="26075"/>
          <exon e_start="26642" e_stop="26758"/>
          <exon e_start="26864" e_stop="26932"/>
          <exon e_start="27576" e_stop="28110"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTTTCTAAGTTTAGAAGTGGAACAAGAACATCCCGTTTGTCGGCTTTTCGTTCAAAAGCTGAGGAAGCTAAAACATCACGATTATTAGCTTCTCGTTCTAAAGCTGAGGAGGCACAAACATTGCGCCTGTTGTCTTCTGGTTCTAATGCTGAGCAACCACAAATAGCTCCTTTGCCGGTATTGATCTTGTGCCATCTATAGTTGATTGTTTCTTCTTTCGTTGTGTTTTGTTGAAATTTTGAGATTGCCTGGTCTTATCTGATATACCTTTACATTCTGTCTAAGCGATGCCACGAATGCTGAAATACATGTCCTCCGCTGTGCTATGTAAATTATGTGAGCCTAAAAAAATCTATCATAGCTAGTGCACTTGTTAGGAATCAATTGTTCCGTATCTAATTCATCTACTAGGAATGTGGTTTAAACTTTTAAACAGGTGATGAGAGAATTTGGTGCTCTCTGGTTTTGTTAACAGAAAGAATTCTCCTAGAATTACATGTTCCAGGCTTTATTTTTTTCTTCCGTCTCATAAGTTGACATAGGGAAATGGCAGTGGAGTTGGGGTCACTACGGTTTTCACTTGTAACATTGATTTTATTGCAGCCTTCTCTTTCAATATTTCAATCTTATTTGGTAAATACTTTCTCACCATTGGCACAACTCTCTTATGTTATTTGCCTACATGCAGGATGCTAATCAGCAGATCATTGCACGGTGTGAGCCAGTGCAGAATGATGATATCATTATTGAAGATCTTATGCAACGCCATGATGTGCTGCTAAATTCGTTTAGATCTCGTTTGACAAAGCTGCAGGTAACCTTTAGCTTATATTTTTTATAGTTTGAGCTTATGTCTACACGTGTCACACATATACTGGTTTCTGCATTCCTAACTTTATCTTAATAGGATTTAACTCTTTAGAAACGTCAGTCTAATGTTGACAGCGTGGAATGTAATTCTTGTAGGAATTGGAAGATCTTTTAATTGATACTTATGATATAGGAAAAACTGTGTGTGATCCTGTAATGCTTGAAGCCTCTTACAAGTATGGTCTTTTAAACTCACAGGTAGTTCGTCACTACTGGGAACGGAATGACATCAGGGGTGCTTTTGAGGCCTTGAGGAAGTTGTCAGATTATTCTGTGAGCATTTATTCTTCTGTCATAGTGGTCTCTTCCCAAATATTATATTTGATAAACTCTCTAATGTATTTCTTAAATTTATTTCCTCTTGCAGGTGCAAGCTGATGTTGTGAGTGTCCTCGTAGATAAAATGGAGATTATCACTTTGGATTTGTTTTCCTTCTTGTTGCCTGTACTGTTAGCCTTACTTGAAACTAAGATAGAAAGGTACGTAGTGATACAACTCATTGCTTGTTGCCTTAACTGTTTCCAGTTTGACATCCTTCAAATATGATCTAAAAATACTGCTTAAATGATAACTGCGGTATACATGGTGATTATTTATTCTTTGATACATATCATTACCAATCAAGCTCGGGTGACTCTGGTTTTGAATTTCTGGAAAAAAAAAATATTGGTTTTCCTTCTCCATCCTGCCAAACTAGAAGTTTTTGCAAACATGGTAATATATAAATTCGAAAGGTTAGAACAGAAAAGAAGGAACGATACATATCTTGGCAAACCTTGACATTTAACATGGTGGTGAATATTACTTGCTTCAAGGGAAGCATAAGAGATAAAAGGGACTACCTCAGATGGTTTCTTAGCTTTAAACAATTTCTGGTTCTGTCTGTGTGGATATGGGGGTTGCATAGCACACTTATTTATTTCATTGAATTCTGCTGTTAATTTTTATTTTATTTTCTGATTGCGCTGTTAAATTTTATAGTTATATTTTTTTAAAATTTCTTATTCACATGTTGATTGCTTCTGTCTTTTTTACTCTTCTTTAGGCATGCAAATGTTTCCCTGGAGCTGTTGTTGAAACTTGTTGCAGTCTTTGGACCAGTAGTTCGCTCAGCCGCTTCAGCACGTCCATCTGTTGGGGTTGATCTTCATGCAGAAGCAAGGTAATGATGCTTATGTGGCTAAGCAGTTCACTTCTTGTTTATATGCTTGGATGCTGGTAAATACAAAACACTTACCTGTCTTCGATTTTGTACACTGTAAAACAGAATTAAGTGCTGCAGGCAGTGCTTTGCCTACCTCCAAGATATACAGAAAACACTTCCTGAACTTATAAGGTAACTAAGAATCTACTTTTTTACTTTTCATAATTATGTTTGTTGTCATGAATTTATTTTATGGGTGGTCCAACTCATCCTCTCTTTATCTGGGATAGAGTTACTAGAATCCCAATAGAGCTTCAAAGTCAGAAAAATGGCAAGTATAGTGCCTCATTATGTTTGAGCCATCGATTAAGGTGTTGTAAGCATACTTCACAGTCAATGATGCACAACAAACTTCAAACCTAGTAAGAAAATGAGAATCTTTTGGTTTTAACTTTCATTGGACAATTGTTATGATCAAAGAATGGTGGATTTGCTATCATTGTGATTTATCACAAGTTTTGTATATTGAAATACGTTTGCTTCTATCATGGTAGCTTAGTAACTAGTGAATCAAATTGTTCTGATGCTTCATGATTAATGCTATCTGAATATGTTTGGTTTGTGGGTAAGACATTCAAGGCTTGATATCTAATACAATAGGTCCATGTTGAACTTTTGACATTTTAAAGTAGATGGATGCAACTTGTTGTCGAATAGGACTTCCCTTTGATATCTTTACCTTCTTTTGTTACATATCTAATGCAAGCTAAAAAGTCGAAATTCCTTATGTCTTGATGTTGCTTGCTATCTAAATTTCGCTTACGCTCTGTTGTAGGGGAGGGGGTCAGCCGGCAAAAGGTGCAGTACAATTAAATCTCCTACTTCAAGAATCATAGTCCAGTTTATGATATATGCTTTTCCTAATGGCTAAAGCGAGACAACGGAATGGGAAGTTAGCTACTATACAATGTTCTCAAACTTATGTCTCTTTATGGACACCCACAATTTTGCTCCTCGGGTTTCCGTCCTTGCTACCATTTTCACCAACCTTGTAACAGCGGAAAATTGGCAAGATGGAAATGCAGTGTCTGTCCTCCGCCACTGCAACTGGGTTGGGAGGCAAAGGTAAAAACTCTCGACATAATATATCCTTTTGTTGGAGAGTAGCATCGCTATCTTCATTCAGATACGCGGCTTGAACATATTCAAAGTTCCTGGCTGTATGTGTCCATCCATATGTAAGTTGTGTACATGTATCTGCAATAGTAAAAAAAAATTGGATGAGATGTGTACATCATTTGATCAATGAAACAGAGATTCATACACACACCTTCTCTTGCTATCAAAACTCAATATTGAACTTTCTTCTC</genome_strand>
        <mrna_strand>CTGTTTCTAAGTTTAGAAGTGGAACAAGAACATCCCGTTTGTCGGCTTTTCGTTCAAAAGCTGAGGAAGCTAAAACATCACGATTATTAGCTTCTCGTTCTAAAGCTGAGGAGGCACAAACATTGCGCCTGTTGTCTTCTGGTTCTAATGCTGAGCAACCACAAATAGCTCCTTTGCCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCTAATCAGCAGATCATTGCACGGTGTGAGCCAGTGCAGAATGATGATATCATTATTGAAGATCTTATGCAACGCCATGATGTGCTGCTAAATTCGTTTAGATCTCGTTTGACAAAGCTGCAG..............................................................................................................................................................................................................................................................GTAGTTCGTCACTACTGGGAACGGAATGACATCAGGGGTGCTTTTGAGGCCTTGAGGAAGTTGTCAGATTATTCT..............................................................................................GTGCAAGCTGATGTTGTGAGTGTCCTCGTAGATAAAATGGAGATTATCACTTTGGATTTGTTTTCCTTCTTGTTGCCTGTACTGTTAGCCTTACTTGAAACTAAGATAGAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGCAAATGTTTCCCTGGAGCTGTTGTTGAAACTTATTGCAGTCTTTGGACCAGTAGTTCGCTCAGCCGCTTCAGCACGTCCATCTGTTGGGGTTGATCTTCATGCAGAAGCAAG.........................................................................................................AATTAAGTGCTGCAGGCAGTGCTTTGCCTACCTCCAAGATATACAGAAAACACTTCCTGAACTTATAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAGGGGGTCAGCCGGCAAAAGGTGCAGTACAATTAAATCTCCTACTTCAAGAATCATAGTCCAGTTTATGATATATGCTTTTCCTAATGGCTAAAGCGAGACAACGGAATGGGAAGTTAGCTACTATACAATGTTCTCAAACTTATGTCTCTTTATGGACACCCACAATTTTGCTCCTCGGGTTTCCGTCCTTGCTACCATTTTCACCAACCTTGTAACAGCGGAAAATTGGCAAGATGGAAATGCAGTGTCTGTCCTCCGCCACTGCAACTGGGTTGGGAGGCAAAGGTAAAAACTCTCGACATAATATATCCTTTTGTTGGAGAGTAGCATCGCTATCTTCATTCAGATACGCGGCTTGAACATATTCAAAGTTCCTGGCTGTATGTGTCCATCCATATGTAAGTTGTGTACATGTATCTGCAATAGTAAAAAAAAATTGGATGAGATGTGTACATCATTTGATCAATGAAACAGAGATTCATACACACACCTTCTCTTGCTATCAAAACTCAATATTGAA-TTTCTTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U585567" ref_strand="+" ref_description="SGN-U585567 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157330484|emb|CAO46851.1| (e_value=5e-38) unnamed; (*ATH) AT1G61215.1 (e_value=5e-15) | Symbol: None | DNA-binding bromodomain-containing protein, contains Pfam profile PF00439: Bromodomain | chr1:22576310-22579192 FORWARD | Aliases: None; ">
      <seq>cccggactttatatcctcactgttttacccatgaggcctgcaaagccaggtatgaggagttacgtaagcgctactctggatgcactgctttgtatgaagagttgcggaaacgacgactcgaaaaattgaagcgggaattggtgagatctgagagctccattgggtcacttgagtcaaagattgaaaggctacaggctgagagagagcgatctgatcagatagaccacggtttgagtcgcactaaatctcctgctcctcagacaaaatcagaagatatcgagtcttctgtgaaagaagaagcaaaggatgggttgtctgctggcagcttcacgcttgatattagaacaaacgggtcctccgagtcttaggttcccaccataccctcagctacagaggcagtcgtgaagctagaactttcagagttttggggacgggacaaagctccaagtacaagcaaggttccagagtctgcgaatggaaatggtggggctgtgaggatgagaagaggtaagaggagaagaaaagacacggtttgggatgccaaagaagggagcattgacgacagtgactatgtatgttctatgagtctcgcctccacttctcactgtaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="+" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="32231" stop="35605"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32531" g_stop="32565" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="35" r_length="35" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32566" i_stop="34243" i_length="1678">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34244" g_stop="34293" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="85" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34294" i_stop="34553" i_length="260">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34554" g_stop="34631" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="163" r_length="78" r_score="0.949"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34632" i_stop="34857" i_length="226">
            <donor d_prob="0.984" d_score="0.94"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="34858" g_stop="35306" g_length="449"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="612" r_length="449" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="+" ref_id="SGN-U585567" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U585567" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32531" e_stop="32565"/>
          <exon e_start="34244" e_stop="34293"/>
          <exon e_start="34554" e_stop="34631"/>
          <exon e_start="34858" e_stop="35306"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCGGACTTTATATCCTCACTGTTTTACCCCTGAGGTATACACTTATTTACAATTACCTGCCACTGTTTTTTTTTATTTTATTTTATTTTTATGATAGAGACAACACTACTTTTTGATTATTTTTTTTTCTGGTCTGTTCGTAATCTCCGTGTTTTTCTTCCGTTATAAAAGAATTATTCTTCTTTGTCGGATAGTTTGTTTATTTGTTTATTCATTTCAATTATGCTTCTGCTTCGATTTCCTTATCAGACTGATTTTGTGGGGCCCAATCTCATAGGATAAATTACTAAATAATTGAGTTGAAATTAAACAAATAAATTGAAATAACTTAATTTATTTTTAAAGATCGTGATTTTTTTTTTAAACAGATCAAAAAGAAAAGAAAGATAGTAGTAGTATTAATTGGATAGATGTAAAGACCCTTTCTTTTTTGTTTGTGTCACTGTCTGTCCCTAGTACTAAAAATTGAGTAGATAGAATTACAAATAGTAGTATTATTGTTGAATGTTGAGTGTTGAGGTGGAGGGGTGGCCTAATTATGTGGCAGGAGGAGTTTGGTTGGTAGACTGTCAATGTGGACCAGAATCTGAAGCTTTTGGTGTGTCTGATTACTGATAATGGTGTTGGGACCAGGCAAAATATTTGTCCTTGTTGATGAATGAACATGTGGCTGCCATGTAGAGTGGTGAACCAATGAATAATTGGATCTTTTTTTTGTAGTGGTTTAAAGCATTTTATATGTCAGTGTTTCTTGGTGCCTTTATGTTTTTGCCTTTGACTACGTGGTGGTCTTGTGGTGGATGAATATTTGATAAGACAATTCTTGATGATAACGTATATTTGTACTATGTTTTCTGAATAAAGTTGTTAGCTTTATAGCTGTGTTGATCAAACCCTCTACGAATATTGTTGTGTCTTTCAATAATACATAGCTTTCGAAGGATATGAACGTGACTTTTAAAGATTCGTAGCAACATAGCATTATAGAAACTTGATAGTGATATATGAGGTCTTGACTAGTAATGGTTGTTAGGCTTTTCTTCTCCCCCGGTCTGCGAAATTATTGCCTTTCTGTACGCTTTACTCTTGATCAGTTGATATTAGAGTAGAATTGTTCTGCAAGAGATGTGACTGATTGAGACATGATAGGCTCTTTGATCATCTCGACAAAATTCTTTGTGATGTAATGGAGTTGTAAAACAGAACTCTGAAACATAGCTTGTAATGCCTTATCACTTTCTAATGATAGAGATGGACAAAAATAATGACTGCAAGATTTCTCTGATGCAACCGAGTTGATTGTAGCATTTACTTGGAATATTTGATATTGAGGACCATGGACATCATAAGATCACTGCTTCTCAGTCATAATTTTCTCACATGTCGTTGGTTTTTGGATGCAACTAGTTGTAAAATGAGATATGTTGTGTCTTGGCACATTTGAGTAGTTTGAATAGCAAGAGTTTAGGCTGATAAATATCTTGCTAACTATGTAAATGTACCAACCAGAGATAAGGTAACCATGAGGTATACTAATTTAATTCAGGATTGTAGTGCTCTGTTGACTTATGACTAGCCTATGCATTTTCTGTAGCAAATTAACTTCAATGCTTTTTCTTGACCTTATTTTTTCCATGCTTAAGTTTGCCACACCTTTAACCATACTCTATGATATGCTAATTTGAGTCATCGACAAATAACTTCAATTGCAGGCCTGCAAAGCCAGGTATGAGGAGTTACGTAAGCGCTACTCTGGATGCACGTGAGTGAAGTTCTTCGATATCATGATTCTATTTGTTTATTAATGAGTTAGTTACCATGGAAGTTATGGCTTCTGACATATGACACATGTATGATTTTTGCTTCCATCTAATGTATGGAGTACACAATTCACTGAGATATTTGATCTTGCCTTCAGCTCTGGAATGAATTCATGGTTCCATTAGTTACTGTGAGTTGAATATAATAGGATGCCATCCTTGCCCTAACCAGTGTCTTACTTGTATAACCTTCTTTGGCCAGTGCTTTGTTTGAAGAGTTGCGGAAACGACGAGTGGAAGAATTGAAGCGGGAATTGGTGAGATCTGAGAGCTCCATTGGGTTAGTAAATATGTTTCTTCCTGTTTTAAGTTGATAAGCAAACACTGGCTAATAAATCACTTCATTAATGAATCCTGATGTTTTTGCCAATATTTCATGCATCTGAATGGCATAAAAATCCTGTCTCATTACATTACTACTGCCTCAAGTCTCTGGTTCCCTTAGTTATCTGTATCCTTAGAGTAACTCTGTGATTCTCATATTTTATCTCGACGCTCATTGTCAGGTCACTTGAGTCAAAGATTGAAAGGCTACAGGCTGAGAGAGAGCGATCTGATCAGATAGACCACGGTTTGAGTCGCACTAAATCTCCTGCTCCTCAGACAAAATCAGAAGATATCGAGTCTTCTGTGAAAGAAGAAGCAAAGGATGGGTTGTCTGCTGGCAGCTTCACGCTTGATATTAGAACAAACGGGTCCTCCGAGTCTCAGGTTCCCACCATACCCTCAGCTACAGAGGCAGTCGTGAAGCTAGAACTTTCAGAGTTTTGGGGACGGGACAAAGCTCCAAGTACAAGCAAGGTTCCAGAGTCTGCGAATGGAAATGGTGGGGCTGTGAGGAAGAGAAGAGGTAAGAGGAGAAGAAAAGACACGGTTTGGGATGCCAAAGAAGGGAGCATTGAGGACAGTGACAATGTATGTTCAACGAGTCTCGCCTCCACTTCTCACTGTAAAG</genome_strand>
        <mrna_strand>CCCGGACTTTATATCCTCACTGTTTTACCCATGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGCAAAGCCAGGTATGAGGAGTTACGTAAGCGCTACTCTGGATGCAC....................................................................................................................................................................................................................................................................TGCTTTGTATGAAGAGTTGCGGAAACGACGACTCGAAAAATTGAAGCGGGAATTGGTGAGATCTGAGAGCTCCATTGG..................................................................................................................................................................................................................................GTCACTTGAGTCAAAGATTGAAAGGCTACAGGCTGAGAGAGAGCGATCTGATCAGATAGACCACGGTTTGAGTCGCACTAAATCTCCTGCTCCTCAGACAAAATCAGAAGATATCGAGTCTTCTGTGAAAGAAGAAGCAAAGGATGGGTTGTCTGCTGGCAGCTTCACGCTTGATATTAGAACAAACGGGTCCTCCGAGTCTTAGGTTCCCACCATACCCTCAGCTACAGAGGCAGTCGTGAAGCTAGAACTTTCAGAGTTTTGGGGACGGGACAAAGCTCCAAGTACAAGCAAGGTTCCAGAGTCTGCGAATGGAAATGGTGGGGCTGTGAGGATGAGAAGAGGTAAGAGGAGAAGAAAAGACACGGTTTGGGATGCCAAAGAAGGGAGCATTGACGACAGTGACTATGTATGTTCTATGAGTCTCGCCTCCACTTCTCACTGTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U569001" ref_strand="+" ref_description="SGN-U569001 Tomato 200607#2 [18 ESTs aligned] (*GB) gi|15219892|ref|NP_176319.1| (e_value=2e-134) expressed protein [Arabidopsis thaliana]; (*ATH) AT1G61240.1 (e_value=1e-136) | Symbol: None | expressed protein, contains Pfam profile PF05212: Protein of unknown function (DUF707) | chr1:22585843-22588868 FORWARD | Aliases: F11P17.21, F11P17_21; ">
      <seq>cagtactttccaacaatttcgtctctctcaaagactctttcttttgcctaaccctcctcctccttctttaaccccacccccacctacaccccctaccccccccactgctaccctttgttcacttctttcaatatctatactgtatctatatgcttacctatacatatatgtagatttgtcccattttctgttctgtttttgctgataaagacttgaacttgttcttcaaggttcactttttttttcacttttcaagattctggagctgttgggttgctattttgctacaaacccttgttgggttttcagttcttgagtgttcgatgagaactttttctgtttcatattcgcctgcaacaggcaattaaattatggcggtgtttctgctgaagaaaaggagtgttctccttgacgggggaacatgtggagtaaagatgagacagctaccatttatgtggatcatctgtatagttatgttgtttattgtatataggaccaccaattatcagtatcaacagacagagatggagtcaaggttggatccgttttattcttcaaaggactctagtatggatatgagaagcttgcacagtttaccgcgtggtattatccaagcaagatcagatctggagttaaagcctctgtggtcaacaactagttcaaagtcaaaggcaaaggctagcaattctagctctcataatttattggcagttccagttggcatcaaacagaagagcaatgttgatgctctcgtccaaaagtttctttcagcaaattttactgtcattctattccactatgatggtaatgttgatgggtgggaagacctccaatggagtaaagatgccattcacattgttgctcacaatcagacaaaatggtggtttgcgaagagatttttacatcctgcagttgtttcaatttatgattacattttcctttgggatgaagatttgggtgtggagaatttccatcctggaaggtaccttgaaatagtaaaatctgaaggactggaaatttctcagccagctttagacccgaattcaactggtatccatcatagaatcacaataagaagcagaacaaataggttccacagaagggtctacgatattagaggtagtacgaagtgttcagacgaaagcgaaggtcccccatgcaccggatttgtggagggaatggctccggtcttttccagatctgcatggctttgtgcctggcatcttatacagaatgatcttgttcatggatggggaatggacatgaaacttggttattgtgcacagggagatcgatccaaaaaaggtgggagtagttgatagtgaatatgtagtgcaccagagcatccaaactttgggcggacaatcactgaaaaaggattcaaattctgaagagtctgtgaagaggcacgttgttgatgtgcgatctgagattcggagacaatcaacttatgagctgcaaatattcaaggatcgatgggaacgagctgtgaagcaggacaagaactgggcagatccgtttaaagctagccagagacgtagacagctgtataaacaaaggcgaaaatcaaaggtgaagaagctgagataagcaatgggatagataaaacaaaaggttcataggttgagccttgtaatttgttctttctttttaggccccatgaatctcatcattagttcattacatatataggtttagtttctcctaatttttcttctttttaactttattttttttcacttctcatttatgtacatcaatttttttttttgtaactagccttcggttaccacactgtttcttttgattttaagttccagtttcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="+" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="44245" stop="52097"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44543" g_stop="44859" g_length="317"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="317" r_length="317" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44860" i_stop="46555" i_length="1696">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46556" g_stop="46654" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="416" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46655" i_stop="46753" i_length="99">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46754" g_stop="46861" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="524" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46862" i_stop="47099" i_length="238">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="47100" g_stop="47135" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="560" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="47136" i_stop="47421" i_length="286">
            <donor d_prob="0.960" d_score="0.00"/>
            <acceptor a_prob="0.659" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="47422" g_stop="47538" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="561" r_stop="677" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="47539" i_stop="47689" i_length="151">
            <donor d_prob="0.828" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="47690" g_stop="47773" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="678" r_stop="761" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="47774" i_stop="47876" i_length="103">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.732" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="47877" g_stop="47995" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="762" r_stop="880" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="47996" i_stop="48621" i_length="626">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="48622" g_stop="48723" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="881" r_stop="982" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="48724" i_stop="49296" i_length="573">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="49297" g_stop="49413" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="983" r_stop="1099" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="49414" i_stop="49502" i_length="89">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="49503" g_stop="49568" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1100" r_stop="1165" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="49569" i_stop="49820" i_length="252">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="49821" g_stop="49887" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1166" r_stop="1232" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="49888" i_stop="50590" i_length="703">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.689" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="50591" g_stop="50644" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1233" r_stop="1286" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="50645" i_stop="50828" i_length="184">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="50829" g_stop="50918" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1287" r_stop="1377" r_length="91" r_score="0.978"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="50919" i_stop="51096" i_length="178">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="51097" g_stop="51123" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1378" r_stop="1404" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="51124" i_stop="51243" i_length="120">
            <donor d_prob="0.992" d_score="0.00"/>
            <acceptor a_prob="0.981" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="51244" g_stop="51270" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1405" r_stop="1431" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="51271" i_stop="51401" i_length="131">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="51402" g_stop="51797" g_length="396"/>
          <reference_exon_boundary r_type="cDNA" r_start="1432" r_stop="1827" r_length="396" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="+" ref_id="SGN-U569001" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1826</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U569001" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44543" e_stop="44859"/>
          <exon e_start="46556" e_stop="46654"/>
          <exon e_start="46754" e_stop="46861"/>
          <exon e_start="47100" e_stop="47135"/>
          <exon e_start="47422" e_stop="47538"/>
          <exon e_start="47690" e_stop="47773"/>
          <exon e_start="47877" e_stop="47995"/>
          <exon e_start="48622" e_stop="48723"/>
          <exon e_start="49297" e_stop="49413"/>
          <exon e_start="49503" e_stop="49568"/>
          <exon e_start="49821" e_stop="49887"/>
          <exon e_start="50591" e_stop="50644"/>
          <exon e_start="50829" e_stop="50918"/>
          <exon e_start="51097" e_stop="51123"/>
          <exon e_start="51244" e_stop="51270"/>
          <exon e_start="51402" e_stop="51797"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTACTTTCCAACAATTTCGTCTCTCTCAAAGACTCTTTCTTTTGCCTAACCCTCCTCCTCCTTCTTTAACCCCACCCCCACCTACACCCCCTACCCCCCCCACTGCTACCCTTTGTTCACTTCTTTCAATATCTATACTGTATCTATATGCTTACCTATACATATATGTAGATTTGTCCCATTTTCTGTTCTGTTTTTGCTGATAAAGACTTGAACTTGTTCTTCAAGGTTCACTTTTTTTTTCACTTTTCAAGATTCTGGAGCTGTTGGGTTGCTATTTTGCTACAAACCCTTGTTGGGTTTTCAGTTCTTGAGGTATGTTTTCAATCTTTCTTGGTTCTTGATTTTTGGTGCTGTTATGGAGGTTGTTGAGTAATGACAATTAAGCCCATGGTGGAGTTGGGTGTGATTGTTCTTGAAAAAAGATCAAGTCTTTAATTAATGGGGTGGCGTGAGTTGATCAGATTCATTAGCTTTTCGAAGTTTTATTAATGCTAGTGTTTGTGTAATTAATGGTTGGTTAAGTATGCATTGAATGGTTGTTTGTTGTAATCTTGAAAACTGATTACTTCAAGTAACGTCTTCTCTTCATTTAATTTTGTCCCCTGGTCTTTTGAATTCTCCTATTTTTTGGATCCTATTGAACAATGGTTTCCCTCATCAATAATTTTGAATTCGTTATAGGATTTGCAAAATTTGTAAAAAAAATGAGCAGATGTTAGGAATTTCGTCTGTTTGCTGTGAGCTTTTTTATTTGGAATTAAAAAACTCTGAATCACAATTTTCTTTTTGTAGGGAGGAGGATAGATTTTTGTTAATCACTACTGTTATTTTCCAGATTCATTTATCTAGTTTTACATGGTTCTTAGTTCAACGCAGATAAATATAGAACTATATGAATTGGTTAGATTAAAACATAGAATGTGGGTTGAACAATTTTTTTGGTAGTCTTGATGCCGTGTGAATTGCAAATGTTGTTCCGAGAAAAATTCTGGCATACATGAAAATCAAACAAGGTGACAACTGTTAGTGGAATTCGTCAACTTTGTCAAACGCTTGCGTGTCACTTAATTGTCATATTCTCTGTCTCTACATTCAAATTAGACATCTTATCATTGACAACACTGCCTTTTCCATTTTTTCGGTCGGTTTGTTGGTGGGGATGGAAAGAGGCAAAGAATGAGTTGTCTTGGAATAGCTTACTGAACTTGCAACTGCTTTCCTTTTGTTGATAAGGGCGTGGTCTACAATTAATTTGCTCACACCTCAGCCATAACACTTGCTATCTTTCACTAGGTAAATTTTTCTGCCAATGCTTTTTCCGATGGAAAGAGGTCACTTAGCGTTTTTTATCTTTTCCACTCTCCCATAGTATTAGTCCATTTCATTCACCTAGCTACTAGTCCCAAAGTTTTCACACACTCCATTACCTCTTGGGCACATCCAGTCTACCAGTAGCAACCCTGAATTCAAAATGACCTGTCAGTTCTATAATCGTCTCCCAATGTTTCACACGCTTGATTACCTCCAGGGCACATCTAGTCAACCACTAGTGACCACAAATGCAAAATGACCTCTCATTTACAAGCAGATATTGTTGCCTGACTGTGTAGTTGTGTGGGTAACTCATAATTTTGTGATCTAATCAGATTATAGAATATTGGTCGCTAGATCCTTTTTGGGTTTTGTCCATAAATGGTGTCAAAAGAAATTGGTTACTGTATTCATGTGTGTTAATAACCTGTTAAATCGGCTGAGTGAGAGAGTTACTAGGCAATCTTATGTACATTTAAGTTTCATTCCATTTTGGTCAAACTGATAGCTAGCACAACATTCTTTTCCTTGTATGCGTTGTTTGCTAGATACGGAATTCCGTTGGAGATTTTATATTAGAAATAATGTTCATCAGTTAATGAATTGCAGAAAAGAGATAAATGTGTAACGGCTTTAAAATCTATTTTGCTAGATTCTTTGTTAAGACTAGTTGTTGATATGTGTATATTTGTTGCAGTGTTCGATGAGAACTTTTTCTGTTTCATATTCGCCTGCAACAGGCAATTAAATTATGGCGGTGTTTCTGCTGAAGAAAAGGAGTGTTCTCCTTGACGGGGTATGTAAATGCTATCTGGTTAGGAATTACTAATGACCTGATTATCTAGCTAACAATCCATAGATTTATTAAACATTAACTTGTGAAATTGAATTGCAGGGAACATGTGGAGTAAAGATGAGACAGCTACCATTTATGTGGATCATCTGTATAGTTATGTTGTTTATTGTATATAGGACCACCAATTATCAGTATCAACAGACAGAGGTATGATTGCATTGTACTGCCATTGATTTGCTAACATTTGCTACTTCTAATTTTGACATTTAGAGGGTCGCATGTGAAAGTATAAGAGAGAACTTTCCATTTATCAAACCGAGAGAGGCCAGATGATACACATTTGGTGGCGTACAAGTTTATATATTGACCTTCTAATTGTGCTTTACTTGATTACCCTAATACAATGTTGCTAAAAACATTTTCCTTTCCCTGTTTACCTTTTCAGATGGAGTCAAGGTTGGATCCGTTTTATTCTTCAAAGGTAGTTATGTTCCTTTTTTTAGAATACTAGATTTTGTACCTTGCACATCACAGGTAGTACCAACAGGATTTATTTTTTGAAATTCAAGAAGTTCTATAATTCATCATTACTATTTCTTGTAATCTAAAGAAGGTGTGCACAACATAAGTAAACAATGGAATACTATAAGTGGTGGAGTGGCATCCGCTTAAATTCAGCACCAAAAAGAATTTATTTTTTTGGGTGAACTAATTTACCCCTAAAAAATCCTTATACCAATGGTGATGCTTTTTATTCTTTCAACCAGGACTCTAGTATGGATATGAGAAGCTTGCACAGTTTACCGCGTGGTATTATCCAAGCAAGATCAGATCTGGAGTTAAAGCCTCTGTGGTCAACAACTAGTTCAAAGTCAAAGGCAAAGGTCTTACTCTCTATACTCCTGAACTTTGAAAAAATAGAGCAACCTCCTTAGGATACTGATATCTTATTTATTACCACACTTTTTCCCTCTCTGTGCTGTCTGTCACTCTGTCATGCATTTAATTTGTGGCAATGTTGTGTCTCCATTTCAGGCTAGCAATTCTAGCTCTCATAATTTATTGGCAGTTCCAGTTGGCATCAAACAGAAGAGCAATGTTGATGCTCTCGTCCAAAAGGTATAACATCTAATTTATGCTTGTTATGGAGAGCACTTATGTTGTGGTACTTTCTGATTTTACTATCTTATATATACCTGTGACCTTATCTTGTGATGTTCAGTTTCTTTCAGCAAATTTTACTGTCATTCTATTCCACTATGATGGTAATGTTGATGGGTGGGAAGACCTCCAATGGAGTAAAGATGCCATTCACATTGTTGCTCACAATCAGACAAAATGGTAAGATACACACTCCATAGGGGATTAAATTGACACGGGCAGATTTATTCACATTAGAGGGAACACCTTAGCCACCTGGACTAGCAATATTTTCTGTGATTTAGAAGTGCTGTTCAACTGATCTGCAGTGTGATTTTAGTGAAAACCGAGTAATCCTTAGGCCACAAGTTGCTTGAGATTAATCTGTGCTTCTCATTAATTCTGAAAGTTTATATCTACTGATCCAACACAGAGTTGCTGGAAATTAGTCTGTTTCATAATAACCATCCAGGATACCCTGCAATCCTTCGCTGAACAAATGATGACATCTTGTTCTTCATGAATCTAGACTTAATATACTCCTAATATACCCTAAGTTGGTCTCATCTTTTGGCTGGATGGAATTGTTACCCTGCAACCTTTGCTGAACAAATGATGCTATCTTGTTCTTCATGACTTTTTGACTGAATGAACTCCTAATATATCCTAAGTTGGTCTCATCTTTTGGCTGTATGCAAAGTGTTATTTAATTTCTTTAGGGTTCTAGTATTCTTCTTATGCAAAGTTTTCATCATTGTGGATGCATCTAGCTTGTATGGTTTATGCTAAATGATATCTCACCATTGTTGTGAATTTATCTGATGCAGGTGGTTTGCGAAGAGATTTTTACATCCTGCAGTTGTTTCAATTTATGATTACATTTTCCTTTGGGATGAAGATTTGGGTGTGGAGAATTTCCATCCTGGAAGGTAAGATGATTGCACGAGGTTGAAGTTGGCTTTCTGTTTATCTTACATTTTTAATCCACCAATAGATACATTAGATACAATTCGTTCACTCCTGGTGAGTATTGTGAATATATTTTCTATTAACTCTTTTTGTGGAAATAAAACAGATCTAATCATTTGATATCTCCTGGTGGATTATTGTGAACAATGATCCTATAGATTCCTTTCTTAGAAATAGGCAGATGTTATCATTTTAAATATAAATTAGTATGAGTTTGTTTCTATGATCCTGGATATTTTTCCTCTCCTATTATTTCTCAAGCATTTGGTGTCAAAAGTCATGACATGTTTATTTGGGCATTCCGAGCTTTTGAGGAGATAAACAGTAGTTGCTTCATTTAGTATCCACAGTTTATTGTATTTACATTGTCATGTCAATGGATGATTTCTATTGCGTACTCTGTTAATCAGGCTTCCTTTTTTATGGGGCTTCTTGCTCTAGAAGGATGGTTGTTAGTTATCATGAAAGCAACAAGTCTTACATGCCTCTTTGCTAATTATAATTTTCTTTCAATTGCATCTTTTGTTATTTAGGTACCTTGAAATAGTAAAATCTGAAGGACTGGAAATTTCTCAGCCAGCTTTAGACCCGAATTCAACTGGTATCCATCATAGAATCACAATAAGAAGCAGAACAAATAGGTTCCACAGGTAAGTCCGCCAGGCTATCCAACCACCCAAATTCAACCTTTTATTGCACCTCCTTTGGATGAATACTGATGCACAATTCCTTTTTGCAGAAGGGTCTACGATATTAGAGGTAGTACGAAGTGTTCAGACGAAAGCGAAGGTCCCCCATGCACCGGGTAAGTGTAACACAATTACTGGATAAGACTGTTATGAGACTTTGGGCATTGGTTGGTCAGGATAAGTTTTTGCATCAGTTCCTGATGTTCAAGTTGACCCTGTTATATATTCTCTTCCTACAATTTTGTTCTACAAAAAAAAAAAAGATTTTGAGAATATTTAACTTCTCGAGTGTCTTGAGGTAGATGCTAGTTCTTCCGGATTTTCTTTATCATGCATTAGAAGAATGGTTGATTCACTCTCCTTTACAGATTTGTGGAGGGAATGGCTCCGGTCTTTTCCAGATCTGCATGGCTTTGTGCCTGGCATCTTATACAGGTAGAACTTTGTTTCTCTCTTTGCTGAGATAGGACATTTTCAAGCCTTTATTAAGAACTCTATGCATACACTTAAATCAGGAATATAAATGTAAGTGAATGTTACCTTTCTCAAAAAAAAAAAAAAAAGAGAATATAAATGTAACTTTACCAATGCTCAAAAAAAAAAAGAATATAATTGTAAGTTTTGAGGAGGATGTTGGATTTGGATATTTTGATTTTCGATTTGAAAGAGGCTGGCAAAAGTATCCTAGAAGTGTGTTTTGATTGAGTGCTAGTGTTTTTGTCACTTTGTTTAGTTGATCATCCCAATGAGTGGTTCATTTTGAAGAATTCTGGCAGCTTAAAATTAAGAATTCTACTGTGTGCGCCTGTGCTCTAAGTTACATTCTTCTTGGTGGAGTGGGGAGCAGTGTTCTCTTAGAGATGATGACTATGTCTGGTTTGTGTCAGAACTTAAACAGTACCATATAAATTGTTGCATTTGCTCATCTTCTAATCATGTTTGTTTTCATTTTGGATTGAAATGCTCGTATACTGTTAATGTGCTCTAAGTTTCAGCGATGTTCTTGAATTAATTTTCCACATGCACTTTTGACATGCCGTGTGGACGCACTATCCACTTTCATTTTCCACTCTTGTACTGATTCATCATCCTGTTTACATGAGCTGCTAATGGTTGCTCTTTGCCTCTTTCCTGTCAGAATGATCTTGTTCATGGATGGGGAATGGACATGAAACTTGGTTATTGTGCACAGGTGAACTTTCTTTTCAACTTGTTAATTTACAAGATGAACCTCTCATCCCTTCCTGTGTATGTTTTTATGCCCTCTGTCTACGGAGTGTAATCTAAATTGTAAATTGCTATACATTTCTCTTTACTCTTTAAAACATTATGTTCTGATACAGCCCTAAACCTACGTGAATTTTATATTATCATAGGGAGATCGATCC-AAAAAGGTGGGAGTAGTTGATAGTGAATATGTAGTGCACCAGAGCATCCAAACTTTGGGCGGACAATCACTGAAAAAGGTAACTCTCTATGTCACTTATCAAAGACTTCTGATTTGTTTATGCAACTATCCTCATTAATCATCCCGAATATGTTAGATAAGGTGTTCTTTAAGTCTACATATAGAGGCTATATTATAATAATTGTTGTGTTTGCTTCTTTATACCTCCATTCACCATGCTTTTTTTCTATGTGCAGGATTCAAATTCTGAAGAGTCTGTGAAGGTATACATCCAATTCTACTTTGTACTTTGAGAGTTTAATTTTCCCAACATCTAACTTCTTCTGCTGATGTTTTAACTGATTCTTGTCCTTGATTTTCATTTTCTTTTCCTTAACCTACAGAGGCACGTTGTTGATGTGCGATCTGAGGTGAGTGTCTGCTTATACGACAACCTATTTATTTCATATAACTTTCTTTTTTCATGGCATTGTTCATGTTGTGTGCATTACTATTGTCTATCTGCCCCTTGTTTTCATAAAACTGCCTTCCCATTTTGCAGATTCGGAGACAATCAACTTATGAGCTGCAAATATTCAAGGATCGATGGGAACGAGCTGTGAAGCAGGACAAGAACTGGGCAGATCCGTTTAAAGCTAGCCAGAGACGTAGACAGCTGTATAAACAAAGGCGAAAATCAAAGGTGAAGAAGCTGAGATAAGCAATGGGATAGATAAAACAAAAGGTTCATAGGTTGAGCCTTGTAATTTGTTCTTTCTTTTTAGGCCCCATGAATCTCATCATTAGTTCATTACATATATAGGTTTAGTTTCTCCTAATTTTTCTTCTTTTTAACTTTATTTTTTTTCACTTCTCATTTATGTACATCAATTTTTTTTTTTGTAACTAGCCTTCGGTTACCACACTGTTTCTTTTGATTTTAAGTTCCAGTTTCTTC</genome_strand>
        <mrna_strand>CAGTACTTTCCAACAATTTCGTCTCTCTCAAAGACTCTTTCTTTTGCCTAACCCTCCTCCTCCTTCTTTAACCCCACCCCCACCTACACCCCCTACCCCCCCCACTGCTACCCTTTGTTCACTTCTTTCAATATCTATACTGTATCTATATGCTTACCTATACATATATGTAGATTTGTCCCATTTTCTGTTCTGTTTTTGCTGATAAAGACTTGAACTTGTTCTTCAAGGTTCACTTTTTTTTTCACTTTTCAAGATTCTGGAGCTGTTGGGTTGCTATTTTGCTACAAACCCTTGTTGGGTTTTCAGTTCTTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCGATGAGAACTTTTTCTGTTTCATATTCGCCTGCAACAGGCAATTAAATTATGGCGGTGTTTCTGCTGAAGAAAAGGAGTGTTCTCCTTGACGGG...................................................................................................GGAACATGTGGAGTAAAGATGAGACAGCTACCATTTATGTGGATCATCTGTATAGTTATGTTGTTTATTGTATATAGGACCACCAATTATCAGTATCAACAGACAGAG..............................................................................................................................................................................................................................................ATGGAGTCAAGGTTGGATCCGTTTTATTCTTCAAAG..............................................................................................................................................................................................................................................................................................GACTCTAGTATGGATATGAGAAGCTTGCACAGTTTACCGCGTGGTATTATCCAAGCAAGATCAGATCTGGAGTTAAAGCCTCTGTGGTCAACAACTAGTTCAAAGTCAAAGGCAAAG.......................................................................................................................................................GCTAGCAATTCTAGCTCTCATAATTTATTGGCAGTTCCAGTTGGCATCAAACAGAAGAGCAATGTTGATGCTCTCGTCCAAAAG.......................................................................................................TTTCTTTCAGCAAATTTTACTGTCATTCTATTCCACTATGATGGTAATGTTGATGGGTGGGAAGACCTCCAATGGAGTAAAGATGCCATTCACATTGTTGCTCACAATCAGACAAAATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTTGCGAAGAGATTTTTACATCCTGCAGTTGTTTCAATTTATGATTACATTTTCCTTTGGGATGAAGATTTGGGTGTGGAGAATTTCCATCCTGGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCTTGAAATAGTAAAATCTGAAGGACTGGAAATTTCTCAGCCAGCTTTAGACCCGAATTCAACTGGTATCCATCATAGAATCACAATAAGAAGCAGAACAAATAGGTTCCACAG.........................................................................................AAGGGTCTACGATATTAGAGGTAGTACGAAGTGTTCAGACGAAAGCGAAGGTCCCCCATGCACCGG............................................................................................................................................................................................................................................................ATTTGTGGAGGGAATGGCTCCGGTCTTTTCCAGATCTGCATGGCTTTGTGCCTGGCATCTTATACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGATCTTGTTCATGGATGGGGAATGGACATGAAACTTGGTTATTGTGCACAG........................................................................................................................................................................................GGAGATCGATCCAAAAAAGGTGGGAGTAGTTGATAGTGAATATGTAGTGCACCAGAGCATCCAAACTTTGGGCGGACAATCACTGAAAAAG..................................................................................................................................................................................GATTCAAATTCTGAAGAGTCTGTGAAG........................................................................................................................AGGCACGTTGTTGATGTGCGATCTGAG...................................................................................................................................ATTCGGAGACAATCAACTTATGAGCTGCAAATATTCAAGGATCGATGGGAACGAGCTGTGAAGCAGGACAAGAACTGGGCAGATCCGTTTAAAGCTAGCCAGAGACGTAGACAGCTGTATAAACAAAGGCGAAAATCAAAGGTGAAGAAGCTGAGATAAGCAATGGGATAGATAAAACAAAAGGTTCATAGGTTGAGCCTTGTAATTTGTTCTTTCTTTTTAGGCCCCATGAATCTCATCATTAGTTCATTACATATATAGGTTTAGTTTCTCCTAATTTTTCTTCTTTTTAACTTTATTTTTTTTCACTTCTCATTTATGTACATCAATTTTTTTTTTTGTAACTAGCCTTCGGTTACCACACTGTTTCTTTTGATTTTAAGTTCCAGTTTCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U572943" ref_strand="+" ref_description="SGN-U572943 Tomato 200607#2 [15 ESTs aligned] (*GB) gi|157345960|emb|CAO15657.1| (e_value=3e-120) unnamed; (*ATH) AT1G65030.1 (e_value=2e-105) | Symbol: None | transducin family protein / WD-40 repeat family protein, contains 5 WD-40 repeats (PF00400); similar to PAK/PLC-interacting protein 1 (GI:14211689) (Homo sapiens) | chr1:24160433-24162313 FORWARD | Aliases: F16G16.2, F16G16_2; (*SWP) sp|Q6TNS2|PK1IP_DANRE (e_value=5e-41) p21-activated protein kinase-interacting protein 1-like OS=Danio rerio GN=pak1ip1; ">
      <seq>ctttttttctctctctctcatcgctgcgtaaagctatgagtttaattgcaggttcatacgagagattcatttggggattcaagttgagatccctcaaaaacgatcagaattacgaactaacccctctattctccttcccttcacatctctcaccaattaaatgcaccgccgtcgccggttctgccgctgtatccggcggcgccgatgacactatcaaaatctatgacctttctacttgctcagaaattgggtcactacaccactccgccaccgttacttcactttccttttttaccccttcttcattctccttccctcgtaaccttattgccgcgtctgaagatggttcggtttccatatatgatgctgatccttttgttcatctcaagacggttaaagtgcatcgtaaggcagtgaattctatatgcattcatccgtcggggaggttggcattgactgttggaagagatgaatgtatggctatggttaatttggttagaggaaggagaagtttttattgtaggttgggaaaagaagcttctttagttaattttagtgatggtggtgaaaagttttttatggttatggatgataagatttctgtacatgaatctgaagatgccaaagctattctagagcttgacagtaagaagagggtgctttgtgccacttatgggatgcatggtattttgtttactgggggagaggaccggagtattaaagcttgggacattactagtggaaaacttgcatatagcattgaagatgcacattctacccgtgtgaaaggcattgttgtgctacacaaaaacagtgatggtgatgctgaagatcatcaacacatagtagcatcagcatcatcagatggggtcatacgtgtttgggatgttcgcatgactaacaaagataagccaaatccactggctgaggtcaatacaaaatccaggctgacttgtctggctggatcatccatcaaatctatgaaaagaccacaggttggaaatactacttcaaatggacaacagctcgacgcaggtgaagaatcatagtgctgtaatttggtaatgacaatcacatagtgtatctgccatatttttcctttagattccccctccccctgaagttgttggaatcatatcaattttgttagttaaaagttgatcactcgaaatctattttgtaaggcgtgtgtattatttaattaatgaatatgagcagttattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="+" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="52479" stop="56129"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52779" g_stop="53458" g_length="680"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="680" r_length="680" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53459" i_stop="54691" i_length="1233">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.757" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54692" g_stop="54989" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="681" r_stop="978" r_length="298" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54990" i_stop="55583" i_length="594">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55584" g_stop="55829" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="979" r_stop="1224" r_length="246" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="+" ref_id="SGN-U572943" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1224</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U572943" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52779" e_stop="53458"/>
          <exon e_start="54692" e_stop="54989"/>
          <exon e_start="55584" e_stop="55829"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTTTTCTCTCTCTCTCATCGCTGCGTAAAGCTATGAGTTTAATTGCAGGTTCATACGAGAGATTCATTTGGGGATTCAAGTTGAGATCCCTCAAAAACGATCAGAATTACGAACTAACCCCTCTATTCTCCTTCCCTTCACATCTCTCACCAATTAAATGCACCGCCGTCGCCGGTTCTGCCGCTGTATCCGGCGGCGCCGATGACACTATCAAAATCTATGACCTTTCTACTTGCTCAGAAATTGGGTCACTACACCACTCCGCCACCGTTACTTCACTTTCCTTTTTTACCCCTTCTTCATTCTCCTTCCCTCGTAACCTTATTGCCGCGTCTGAAGATGGTTCGGTTTCCATATATGATGCTGATCCTTTTGTTCATCTCAAGACGGTTAAAGTGCATCGTAAGGCAGTGAATTCTATATGCATTCATCCGTCGGGGAGGTTGGCATTGACTGTTGGAAGAGATGAATGTATGGCTATGGTTAATTTGGTTAGAGGAAGGAGAAGTTTTTATTGTAGGTTGGGAAAAGAAGCTTCTTTAGTTAATTTTAGTGATGGTGGTGAAAAGTTTTTTATGGTTATGGATGATAAGATTTCTGTACATGAATCTGAAGATGCCAAAGCTATTCTAGAGCTTGACAGTAAGAAGAGGGTGCTTTGTGCCACTTATGGGATGGTGAGTTTTCTGGACTATTACTAGATTGAACTCTCCTCAATTTTTGTACTGACATATTTTGATCACCAACTTACTGTATTGATTATCACTTTCTAGACCATTGCAAAAAAAAAATCATTATTTATCCATTATGAACTGTGCTTTTGTATTCACCTCTTGTGGTTGTGTGCCTCGTTAATTTGTGGAGATCCTTAGACCATTATACTTTCTTAAGAGTGTTTATGAGGCTCAACCAGTAGCAAGTAGAATAGCCATCTGTTACTCTGTCACTGAGTTGTAGAATGGCCATCTGTTACTCTGTCACTGGATTGTAGAATAGCCATTTGTTCCTCTGTCACTGGATTTTGGTGGCAAATTATTTGATTTTTCCGTCTGTAATGGGATCAGTTGGTGGGGGGATATACACTTTTATTTCTTCTTAACCCAAATAGACAGTAGAGAAGCTTATATAGCTAATCAAAGTCCTCAACTGAAGTTTTCAGAATGCAGTTTGCCTATATCTGTTTCTAGCAAGTCCCGTCTCTTGGTGTCTTGTTTGCACAGTGATAAAACATACTTTCAACCTGTTCATTAAGTGCATATATGGGTTAATTGAGATAATGTGGACTATACTGGAATCTGAAACATGAGAATGTTGATGGTGTACTGTCAAAAAAAAAATCAGATATCATGACCAAAAAGAATATGATGGAGTCGGGAAGCTACCTAGTTAGATTGTTCCTTAGGTATCATAGAAAGTGTGTTATTGGTGGTTAATATTTGCTACACATAAAAGGCTCCAGTTTTCTTATATATCTTAATTTCATATATTATTTAACGTATTTCTGAAAATGAGTCTCTTGTGTGCTTTCACTTTCTTTTTAAATTTTCAATCCTCATTTTTTTTGTATAATGGTATTGTTTGGGTCGACTTGCAACTGCTATTTTCCACCAGTGCAGGTGTTAGTTACTTTTATCCAATAAAATCACCTAGCATTTTTTTTTGTATATTCCAGATTCATTAACACCAAAAACCACACCTTGGGTGCTTTCTGTCCCATCCTTTTCCCTGCATGTTGTACATTCTTTTACTTGTCTATCATCTTGCACTTGGTGTCCTACCACCCCACTTTCAAAGCACGATGAAAACAATCAGGATTATATAGATCATGGAATGTTTAGTTGTAGGCTCCAGTTTTTTTTCCCTTCCAATTATTTGATTTACTTCTTGAAGCTGAAAGTAATATTTTACAGCATGGTATTTTGTTTACTGGGGGAGAGGACCGGAGTATTAAAGCTTGGGACATTACTAGTGGAAAACTTGCATATAGCATTGAAGATGCACATTCTACCCGTGTGAAAGGCATTGTTGTGCTACACAAAAACAGTGATGGTGATGCTGAAGATCATCAACACATAGTAGCATCAGCATCATCAGATGGGGTCATACGTGTTTGGGATGTTCGCATGACTAACAAAGATAAGCCAAATCCACTGGCTGAGGTCAATACAAAATCCAGGCTGACTTGTCTGGCTGGATCATCCATCAAATGTGAGTCTTCCTTTGCTATTTGAATTTTCCCCTCTTGAAATGTTTGCCTAATTTTAAATGATTCAGATAGTCACTGCCTTGACTGGTAACTTTTTGATTGTTTTAATTTTGCCTATTCTGTTCTGTGGTGCTAAATCATTTCATTTAAGGTAAAATGAGAATATTAAAGCTAAAAATTGATAAATTTTGAAAAAGGGACATTCTTTTTGGGATAAACTATAAAGAAGAGTCTCACATCAATTGACTGACACTGGAGTAGGAAATACAAAAAATTGCCAATCATTTCTCTTGGTTGATAAGTATAATAGAATCTACAATCTTTTCATTGGCATTTTTTTTTCAAAATTAACTATCGGTGATCCATATTGAAAGAAGAGGGGAATGCCTTTGAGTCTAATGCCAAAGATAGAGGACTATTTTGGGCCTTCTCTCGAGAAACAGTTCACAGGAGCTAACCAGCATCTTATCAATTTAGATTGAAAAAGAGTCACAATTGTAAACATAGGCCGACAGCTATAAATTGCACGGAGTTTGCTACCTAAATAATATGAAACACTCGACTGATTTGTTGTCATTGTCATTGTCATCTTTCAGCTATGAAAAGACCACAGGTTGGAAATACTACTTCAAATGGACAACAGCTCGACGCAGGTGAAGAATCATAGTGCTGTAATTTGGTAATGACAATCACATAGTGTATCTGCCATATTTTTCCTTTAGATTCCCCCTCCCCCTGAAGTTGTTGGAATCATATCAATTTTGTTAGTTAAAAGTTGATCACTCGAAATCTATTTTGTAAGGCGTGTGTATTATTTAATTAATGAATATGAGCAGTTATTT</genome_strand>
        <mrna_strand>CTTTTTTTCTCTCTCTCTCATCGCTGCGTAAAGCTATGAGTTTAATTGCAGGTTCATACGAGAGATTCATTTGGGGATTCAAGTTGAGATCCCTCAAAAACGATCAGAATTACGAACTAACCCCTCTATTCTCCTTCCCTTCACATCTCTCACCAATTAAATGCACCGCCGTCGCCGGTTCTGCCGCTGTATCCGGCGGCGCCGATGACACTATCAAAATCTATGACCTTTCTACTTGCTCAGAAATTGGGTCACTACACCACTCCGCCACCGTTACTTCACTTTCCTTTTTTACCCCTTCTTCATTCTCCTTCCCTCGTAACCTTATTGCCGCGTCTGAAGATGGTTCGGTTTCCATATATGATGCTGATCCTTTTGTTCATCTCAAGACGGTTAAAGTGCATCGTAAGGCAGTGAATTCTATATGCATTCATCCGTCGGGGAGGTTGGCATTGACTGTTGGAAGAGATGAATGTATGGCTATGGTTAATTTGGTTAGAGGAAGGAGAAGTTTTTATTGTAGGTTGGGAAAAGAAGCTTCTTTAGTTAATTTTAGTGATGGTGGTGAAAAGTTTTTTATGGTTATGGATGATAAGATTTCTGTACATGAATCTGAAGATGCCAAAGCTATTCTAGAGCTTGACAGTAAGAAGAGGGTGCTTTGTGCCACTTATGGGATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGTATTTTGTTTACTGGGGGAGAGGACCGGAGTATTAAAGCTTGGGACATTACTAGTGGAAAACTTGCATATAGCATTGAAGATGCACATTCTACCCGTGTGAAAGGCATTGTTGTGCTACACAAAAACAGTGATGGTGATGCTGAAGATCATCAACACATAGTAGCATCAGCATCATCAGATGGGGTCATACGTGTTTGGGATGTTCGCATGACTAACAAAGATAAGCCAAATCCACTGGCTGAGGTCAATACAAAATCCAGGCTGACTTGTCTGGCTGGATCATCCATCAAAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGAAAAGACCACAGGTTGGAAATACTACTTCAAATGGACAACAGCTCGACGCAGGTGAAGAATCATAGTGCTGTAATTTGGTAATGACAATCACATAGTGTATCTGCCATATTTTTCCTTTAGATTCCCCCTCCCCCTGAAGTTGTTGGAATCATATCAATTTTGTTAGTTAAAAGTTGATCACTCGAAATCTATTTTGTAAGGCGTGTGTATTATTTAATTAATGAATATGAGCAGTTATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U577940" ref_strand="+" ref_description="SGN-U577940 Tomato 200607#2 [21 ESTs aligned] (*GB) gi|192910838|gb|ACF06527.1| (e_value=2e-109) secretory; (*ATH) AT2G20840.1 (e_value=2e-99) | Symbol: None | secretory carrier membrane protein (SCAMP) family protein, contains Pfam domain, PF04144: SCAMP family | chr2:8978843-8981551 REVERSE | Aliases: F5H14.19, F5H14_19; (*SWP) sp|Q7F613|SCAM2_ORYSJ (e_value=9e-103) Secretory carrier-associated membrane protein 2 OS=Oryza sativa subsp. japonica GN=SCAMP2; ">
      <seq>gtctttctaccactctagaattgtagtggaattttctttcttcttgtttttctcattcaaactactatagttttcaagactctgcctttttcccccttctctgcttagccttttccacctattttttgctattcagatctcaagttttacactttgctttccctctgtaaatttcttgttttgtggcaaaattcagaaagtagcaaagttttcttgaaatggccggccgttatgatcataacccttttgaagaagaagaagaagttaacccttttgctgatggcggaggcagagggaaatcttcagggcaatcaaaatttagtggaggtgcattttataccacatccgggagtgtgcctccagcaacaaactccagactttcaccccttccgccagaaccagctgatttctatgaccgcaatgcgtcaattgatattcctcttgacagtgcttcggacctgaaaaagaaagaaaaagaattacagtctaaggagaatgaattgcggaggagggaacaggatctaaaaaggagagaagatgctgctgcacgagccggcattgttctcgaggagaaaaattggcctccgttcttcccaatcatccatcatgatattgcaaatgaaataccaattcatcttcaaaagctacaatatgttgcatttacaacgttcttgggacttattgcatgcctattatggaacattgtagctacaactacagcatggattaaagaaggagatgtgaagatctggttcctttctatcatatacttcatatcaggtgttcctggagcctacttcatgtggtatcgtcctctgtatcgtgcgtttagaactgagggtgccatgaagtttgcgtggtttttcttgttttacttggttcacattgtattttgcgtctttgctgctgttgctcctccagtagtcttcagaggaaaatcccttacaggcatcctgcctgcggtggatctcatcggcaaaaatgtacttgttgggattttctacttcatcggttttgggttattttgtctcgagtcattgctgagcatttgggttattcagcaagtatacatgtatttccgaggaagtggtaaagccgcgcagatgaagcaagaagctgctagaggtgcccttagagcagcaatataattgaaagaaatgttcttggtagaaggctgttaaatatgcttttggtgattatatgttttagttagttcaatttgacatatatgctgcttgttttgcatatgcttttggtgattatgcttttatttatgactacttagaccaaagtgctgttaggaaaaagatttagaattccttttgtttaattggagacaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="+" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="57205" stop="64115"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57505" g_stop="57782" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="278" r_length="278" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57783" i_stop="59004" i_length="1222">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59005" g_stop="59070" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="344" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59071" i_stop="59444" i_length="374">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59445" g_stop="59555" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="455" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="59556" i_stop="59657" i_length="102">
            <donor d_prob="0.950" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="59658" g_stop="59720" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="518" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="59721" i_stop="60584" i_length="864">
            <donor d_prob="0.812" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="60585" g_stop="60618" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="519" r_stop="552" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="60619" i_stop="61042" i_length="424">
            <donor d_prob="0.978" d_score="0.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="61043" g_stop="61165" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="553" r_stop="675" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="61166" i_stop="62020" i_length="855">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.876" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="62021" g_stop="62083" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="676" r_stop="738" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="62084" i_stop="62170" i_length="87">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.224" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="62171" g_stop="62264" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="739" r_stop="832" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="62265" i_stop="62519" i_length="255">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.615" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="62520" g_stop="62565" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="833" r_stop="878" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="62566" i_stop="62821" i_length="256">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="62822" g_stop="62889" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="879" r_stop="946" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="62890" i_stop="63131" i_length="242">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="63132" g_stop="63180" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="947" r_stop="995" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="63181" i_stop="63373" i_length="193">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="63374" g_stop="63439" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="996" r_stop="1061" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="63440" i_stop="63535" i_length="96">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.877" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="63536" g_stop="63815" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="1062" r_stop="1341" r_length="280" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="+" ref_id="SGN-U577940" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1341</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U577940" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57505" e_stop="57782"/>
          <exon e_start="59005" e_stop="59070"/>
          <exon e_start="59445" e_stop="59555"/>
          <exon e_start="59658" e_stop="59720"/>
          <exon e_start="60585" e_stop="60618"/>
          <exon e_start="61043" e_stop="61165"/>
          <exon e_start="62021" e_stop="62083"/>
          <exon e_start="62171" e_stop="62264"/>
          <exon e_start="62520" e_stop="62565"/>
          <exon e_start="62822" e_stop="62889"/>
          <exon e_start="63132" e_stop="63180"/>
          <exon e_start="63374" e_stop="63439"/>
          <exon e_start="63536" e_stop="63815"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTTCTACCACTCTAGAATTGTAGTGGAATTTTCTTTCTTCTTGTTTTTCTCATTCAAACTACTATAGTTTTCAAGACTCTGCCTTTTTCCCCCTTCTCTGCTTAGCCTTTTCCACCTATTTTTTGCTATTCAGATCTCAAGTTTTACACTTTGCTTTCCCTCTGTAAATTTCTTGTTTTGTGGCAAAATTCAGAAAGTAGCAAAGTTTTCTTGAAATGGCCGGCCGTTATGATCATAACCCTTTTGAAGAAGAAGAAGAAGTTAACCCTTTTGCTGTAAGTTCCTTCTTCTTCTCTTTTTTTCGTTTTTTTTTTGCGGTTTAATTCTGAAAGTTGCTATCTTTCCGTTCTGGGGTTTCCTATTTTGCTGCTGTGCAAGTGGGATGTTTGTTATTCTTCACTTGATCAAGTTTTTAGTGATTCTACTGCTCTGTTTTTGTGTGTGTGTTTCTGGGCGTTAACTCGTGCTATGCGGTTTAATTATGAAGTTATGATCGTTTTGTTTTCTGGGTTTTTCTATTGTTTATTGGTTTTGCAAATCAATATTTCAGTTTCCTGTAATGGTTAATTGAAAAGGATGTAGCTTTAATCTGACTTGAGTTGAATTTGAGGTTTTGGGTTTTATATATTTTGGAGTTGATCGTTTTTTATTGTGAAAGTGTAGTTGGAGCTTATTAATCCAAAAAAAAAATAAATTAAAAGTGTAGCTGGTGCGTCCTATTTCCCATGCTTTGTTGGATTGATTGATTTGGGACCATCTTAAGTGGTGTGATTGATTTTTCTGTAGGTTGACGTTTTCTATGGGAAACATTGAAATATATGATTATAGATTGTTATATGGAGTACTATGATTAGCGGAAGTTGTTTAGTTTTGGTATTCTGAGATATGGGGGAAATCTCTTTTCTTTCATTGAGTCCAGCTCTTTTATCTGTAATGTGGGTTTGATGGTGTCTGACCAGTTTAAGAGTTGGTGTCTAAAGGAAAATGGTTCCTCGTTTTCATTTCAAATGTGTTCCATTATGCAATTGGTAATAATGTTTCCCGTGGTGATGGATAAGGAAATCCAGGATCATATGTGGATCCGTTCCTTGGCTCTACTTAATCGGATATGTGTAATCTAATATAAATGATTGGCATAAAAGTGGTTGTAGTAAAAGTGATGAGTTAATTTCTTTTGGCTTTAATATTTGCAATACTGGAGGCATTTTGGAGAAACAATTAACATCATACATATTTGAATATTAGAACCCTGTAATCCTTGATGTGTTCCTAATATAGTATGTTCTGACTTATGTTCATTGTAATGTAAGTTTAGTGAATGATGTCACAGAGTCATGTTAGATCACTCATCACAGGATTTTAGATATTTTTTGCACTGATCTCCTCCTGTGCATGAACAATAATTATGGCATCTATGTGTGCAAGTGTTGGATAAATGGATGATTTAGTTTTTTTTTTTGTATAACAGTCTCAAGTATCTTCTGAAATTTGCTGCAGGATGGCGGAGGCAGAGGGAAATCTTCAGGGCAATCAAAATTTAGTGGAGGTGCATTTTATACCACAGTAAGTTGGACATACTTTTCTCTGTCCTATTTGTGTATCTCAGTCTGCTTACATCGGGATCGGGGTTTGGAAACCAGTTTTCCTTATTTTTGTAAGAGATCAATATTTCTACCTTTACAAACTGCTGCTGTATCTGAACTAAGCCTTTGCTTATGCTTAGTTGCTTTATCTTTGTAACCTCCCTCATTTTTTTTCCTTTTTTTAGTGTGTGTATGTGTTGGGGGAATGGGGTTGGTGAGGTGAAGTAGAAAGGAAGAAAGTACGGGTAAATAGATGGATTGGTTTCTTTTGTTGAGTGTTTGAAGTTGCTAGTATCTTTTGCCATTTCCTCTTGATGTATTATCTTAATATTTTCCCTTTTATCAACTTTTCAGTCCGGGAGTGTGCCTCCAGCAACAAACTCCAGACTTTCACCCCTTCCGCCAGAACCAGCTGATTTCTATGACCGCAATGCGTCAATTGATATTCCTCTTGACAGTGCTTCGGTAGATGGAACTTTCTGAATCTCTGTGATGATTTGTCATCTTTATCTTATTTGACATTAGTAGCTATGATGGTTTCTTACTTTAAGTTTGTTTGAATTAAAGGACCTGAAAAAGAAAGAAAAAGAATTACAGTCTAAGGAGAATGAATTGCGGAGGAGGGAACAGGTATGGGATGATGAAAATTTGAACCAGTGTTTTATTAATAGTCACACCCTTTTTCTGGGTGATGAATGTTTATTGTATTTCCCCTATATGACGGCTATATTTGTTAGTTTCTGTCTGTAATTTAGCATTATTATCTTGTTTCCCTCTTCTTTTCTCCTTCCATCTAATGTATTTTCTGGATTTCTTTTGGGGCGTTATTCTGGTTTATTCACTCTTTTAGAATGTGCTTACTTCTTCTACCACTGATGAACATGGATGAATTGCAAACGAACTTGTTCTGTAGTATATTCTTGAAAATAGATGGGAGGTTCCCTAGAGCATATGCCATAGGAATTGTGCGTTTACTGTTTGTGATATAGTTATACTTGCAGCCGAGGGGCTTCCTTTTGCCGTCCTCCTCTCATTGCAGTGATGTGATGGAGAGACTGGATGAACCGTTTGTTCTGATATCTGAAGATAAGTCTTGGAGATTCTTCCACCCACTTAACAAAAATTTATACGAGGGGGATAGGAGGTTTGTAGAGCACTTTCTATTACTTCCCTGCTTACCAAATATTGTTCCTATTCTTTGAGGGCCTATATAATCAAACAAGAACTCATTCAGGCGTCTACTTGTTTTGAGCCAGAAGTTGTGGATTAATTCTCCTGTGAAAAGTTCGCAGCTGTCTACTTTCTTTAATTTGGAATTAATTGGCATCTATTATGTCTCTTGTTGCCTACGGCTCTTCTTTCCTCCTATTCTCGTTACGTGTTACTAATCTATTTGAGTTGAAAATATCATTTCCCTCTATTTGCACCTCAGCTCTTTGTTGCTGGTGTATCAAAGTCATCTTTTCACTTATCTGGTTTCTCTTTGTTTTGCAGGATCTAAAAAGGAGAGAAGATGCTGCTGCACGAGGTGCTTTTTTTGCTTTTGCTTCAATTCTCTTTTTGGCGTTTATCCTTCTGCTGTCCTTCTGTTTTATCTTCAATGAATATTCAATCTTGCAATATTCTTAGACATTTAAACTACTAATATGAAGTGAGAAATCCATATATAGTTTCTAATTACATCCGAAGGAAGAAAGATAATGGTACCTTCTATGTTCCAGATTGAGCCTTCTGATTTTTATCTAGGGCAATTTAAATTTTTTCATCTTCTCATACTGGTCTCCACCATTCTTTCCACATTTGAAGTAGAATTTTGATGTTCAAATATAACTTTCAATTCTCTGATTTGCCTGAGTACCTCTCTAGTTTTGTAGAATAATGTATTTCAGATGGAACTTCTGTCCTGTGATTATTGTAGTATCTTACAAGTTCAGTTCATCTTTCAATTGCAGCCGGCATTGTTCTCGAGGAGAAAAATTGGCCTCCGTTCTTCCCAATCATCCATCATGATATTGCAAATGAAATACCAATTCATCTTCAAAAGCTACAATATGTTGCATTTACAACGTTCTTGGGTATGTTATCTCCTGCTTACCATGTCTTCGGTTATTCTATTTGGAACACCGTATATGGTGCATACTTTAGATGGGTTTGTGTTCTTATATGGTGTACCCTCCGTCCAAAAAATTGTGAGGTTTGGAGCGAATTCGTCACACATCTAATTTTAAAATCAACTCCTTGATTTGTTTAAATTAAATTACACATTTAAAAAATACATCGAAGCACTAAACACAACTTCTTGTAGTAGAAAATATTTAGAGATGTTCGGATAGAATTGTCAGAAAAATAGTTGGACTCTAATAGTAATGTACCAAAAAAGTCAGATCCCCATATAATGCCTTTTTGGAGGCCTTCAAGGAATTAGGTACAATATTGCAGAAACTAAAAAGACCCTAGTTTAGTCCTTATAGAAAGAAAAACAGAGATTTGAATTTATAATCCTTCTCTTTTTCGTCCCCCTTCCCATGTAACTTGGACTTAAAAATGTGTGCATACCAGTAAGAGTATAAGTGTCTGGTAGAGGTGGGGGAATTGTTTTTGCAAAATTTCTAGTATTTTCGAATGATCTTCCTGTAAGTGCCACTATGTCTATTTCGGTACACTTTACTGCACCAGCAGACAAGTGAGGGATCCATATGTTTTTGCTCACTTTCGATCAACATTGTAACTGAATCTTATGGTGAAAATTGCAACTCAAACAAGCTTTTGCTAGTGAATTGTTCAGGTTGTTGAATAAATTTTTTTTGCACGTTATAACTTGATAGATCTGTGTGCCTGGAATAATTTTTTGAGTATGATTTGTCATTTTGTACTGTATGTGAGTTTCTTGTTTTTCTCTTGCTAATGAGATATATGCTGATCGTGAGCAGGACTTATTGCATGCCTATTATGGAACATTGTAGCTACAACTACAGCATGGATTAAAGAAGGAGGTACATCGAATCGGCATGTCACCCTGCCTCTACATGCCATTACTTATCCGATGAAGTCAGAATACTTACTTTAGTTTTTGTCTGTAGATGTGAAGATCTGGTTCCTTTCTATCATATACTTCATATCAGGTGTTCCTGGAGCCTACTTCATGTGGTATCGTCCTCTGTATCGTGCGTTTAGGTAAACTTATCTGTCTTTTCAGAGAATTGAGCTGATTTACTTCAGAAATTATCAAACAGTTTTTAAATGCGATAACTGATCTTTTTGTTGGTTGTTATTGCTGAAGTAATAAATTCGAAAATTTTGTCAATGTTGCAGAGAACTGATTCTTTTTTTAAATTTTGCATATGCCTCCCACGAGTTTATCCCCTTGTTTGTCTCTTTTCTTTTGCCTTGTTTTCCCCTTCCCATACTAATCGTGGTATTTGGTCACAGAACTGAGGGTGCCATGAAGTTTGCGTGGTTTTTCTTGTTTTACTTGGTAAGTTCCTTATGCAATTGTTTTTGTCTATGTTATATACTTTTTGTTATTCTGCCATATGCTCAACGTGAATGACATGGGAATGGGTACTTTATAAGGATCCTTTAAAATACACTAGAAACTTTCAAAAAAGTTAAGATTACTCCCTACCGTGTACATACCTGTACCTGAGTCCATATTACAAAATACAAAGTCAAAGATATCTTGGATATCTGATTCAAATGTTCAGCTGTCATAGATTTTTCTGTGTTTGCAGGTTCACATTGTATTTTGCGTCTTTGCTGCTGTTGCTCCTCCAGTAGTCTTCAGAGGAAAATCCCTTACGTAAGTTCCATATTGCTTTTGACTTTTTAGAAAGAGTTGTAAAATTACATTAACACTGTCACCTTTTTCCAAAAAAAAAGAGACTCAAATAAATCCACTGTTTCCGGCATACTAGTTCCCTTCCAACCAAAACACTGAGTTCTGCTTTCGCCAAGCTTATTGCTTTTCAATTTCACATGGATTTCATCTATGAAGTAGCTAACCGTTAAAATGATCTGATGTTCTGTTATTTGTTGGAACAGAGGCATCCTGCCTGCGGTGGATCTCATCGGCAAAAATGTACTTGTTGGGGTGAGTTATGACTATTTTCATCACAATCCATAGTATCCCTGACGTACCTTTTGCGCCTTTTTGTTTAGATGGACTACCTTTTCATTAATTTGAAATGGAAGAACAGAACCTACTCAAAACTTCTTTCTAATGAAAGTTTTAACTCAAGCTAATAAAGGTTATTAACATGAATCTGCTGTCCTTCCCTTATTAGATTTTCTACTTCATCGGTTTTGGGTTATTTTGTCTCGAGTCATTGCTGAGCATTTGGGTTATTCAGGTCAGACTCATTTTCTGTTTATCTGCTTCCCAAAATATGCTTCTCACTCGATCCTCGAATGAAATCTCCTGGTTCATGTTTACTCTCATAATGCAGCAAGTATACATGTATTTCCGAGGAAGTGGTAAAGCCGCGCAGATGAAGCAAGAAGCTGCTAGAGGTGCCCTTAGAGCAGCAATATAATTGAAAGAAATGTTCTTGGTAGAAGGCTGTTAAATATGCTTTTGGTGATTATATGTTTTAGTTAGTTCAATTTGACATATATGCTGCTTGTTTTGCATATGCTTTTGGTGATTATGCTTTTATTTATGACTACTTAGACCAAAGTGCTGTTAGGAAAAAGATTTAGAATTCCTTTTGTTTAATTGGAGACACA</genome_strand>
        <mrna_strand>GTCTTTCTACCACTCTAGAATTGTAGTGGAATTTTCTTTCTTCTTGTTTTTCTCATTCAAACTACTATAGTTTTCAAGACTCTGCCTTTTTCCCCCTTCTCTGCTTAGCCTTTTCCACCTATTTTTTGCTATTCAGATCTCAAGTTTTACACTTTGCTTTCCCTCTGTAAATTTCTTGTTTTGTGGCAAAATTCAGAAAGTAGCAAAGTTTTCTTGAAATGGCCGGCCGTTATGATCATAACCCTTTTGAAGAAGAAGAAGAAGTTAACCCTTTTGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGCGGAGGCAGAGGGAAATCTTCAGGGCAATCAAAATTTAGTGGAGGTGCATTTTATACCACA......................................................................................................................................................................................................................................................................................................................................................................................TCCGGGAGTGTGCCTCCAGCAACAAACTCCAGACTTTCACCCCTTCCGCCAGAACCAGCTGATTTCTATGACCGCAATGCGTCAATTGATATTCCTCTTGACAGTGCTTCG......................................................................................................GACCTGAAAAAGAAAGAAAAAGAATTACAGTCTAAGGAGAATGAATTGCGGAGGAGGGAACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTAAAAAGGAGAGAAGATGCTGCTGCACGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGCATTGTTCTCGAGGAGAAAAATTGGCCTCCGTTCTTCCCAATCATCCATCATGATATTGCAAATGAAATACCAATTCATCTTCAAAAGCTACAATATGTTGCATTTACAACGTTCTTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTATTGCATGCCTATTATGGAACATTGTAGCTACAACTACAGCATGGATTAAAGAAGGAG.......................................................................................ATGTGAAGATCTGGTTCCTTTCTATCATATACTTCATATCAGGTGTTCCTGGAGCCTACTTCATGTGGTATCGTCCTCTGTATCGTGCGTTTAG...............................................................................................................................................................................................................................................................AACTGAGGGTGCCATGAAGTTTGCGTGGTTTTTCTTGTTTTACTTG................................................................................................................................................................................................................................................................GTTCACATTGTATTTTGCGTCTTTGCTGCTGTTGCTCCTCCAGTAGTCTTCAGAGGAAAATCCCTTAC..................................................................................................................................................................................................................................................AGGCATCCTGCCTGCGGTGGATCTCATCGGCAAAAATGTACTTGTTGGG.................................................................................................................................................................................................ATTTTCTACTTCATCGGTTTTGGGTTATTTTGTCTCGAGTCATTGCTGAGCATTTGGGTTATTCAG................................................................................................CAAGTATACATGTATTTCCGAGGAAGTGGTAAAGCCGCGCAGATGAAGCAAGAAGCTGCTAGAGGTGCCCTTAGAGCAGCAATATAATTGAAAGAAATGTTCTTGGTAGAAGGCTGTTAAATATGCTTTTGGTGATTATATGTTTTAGTTAGTTCAATTTGACATATATGCTGCTTGTTTTGCATATGCTTTTGGTGATTATGCTTTTATTTATGACTACTTAGACCAAAGTGCTGTTAGGAAAAAGATTTAGAATTCCTTTTGTTTAATTGGAGACACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U565657" ref_strand="+" ref_description="SGN-U565657 Tomato 200607#2 [8 ESTs aligned] ">
      <seq>tcaccatgaatcctattacttgtatcataaaaatgtaaaacttagctaacataatatattgttccacatgacaaaacaaatacaaccaaacaacacatattataagtaatataaatataacaaataacttacttaggtatattttattttttttttgggtgggggtggggttaacaataagcaagacatttcttcttgcaatccatagtacatccaccagatccaccaccaaaaccataaccttttccagcactagaatatgatttataacattttgctggacatattaatttcataccaaaacatgggccttttactttacacacaacactagaccttatgactccaccttttccatatccaccttttgggcctccaaatccaccaccaaatactccaccaccaagcccaggaatattaaaccctccaccaggcccaaatatcccaccaaaacccacatcgccaccgttattatttctgacttcgccactgcctttctttgtttttccaaccccgtgtttattcgggtgaaagtgtcttgtagcaatggtggaattgaatgttttgatgagcaatagagctaagagagtaatggagattttcttcattttttttttggtgaaagagagaggagaagaattgagtaatatttatgggaaaagagagagttataaggagatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="+" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="64309" stop="65589"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64609" g_stop="65289" g_length="681"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="682" r_length="682" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="+" ref_id="SGN-U565657" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>681</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U565657" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64609" e_stop="65289"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACCATGAATTCTATTACTTGTATCATAAAAATGTAGAACTTAGCTAACATAATATATTGTTCCACATGACAAAACAAATACAACCAAACAACACATATTATAAGTAATATAAATATAACAAATAACTTACTTAGGTATATTTTATTTTTTTTTTGGGT-GGGGTGGGGTTAACAATAAGCAAGACATTTCTTCTTGCAATCCATAGTACATCCACCAGATCCACCACCAAAACCATAACCTTTTCCAGCACTAGAATATGATTTATAACATTTTGCTGGACATATTAATTTCATACCAAAACATGGGCCTTTTACTTTACACACAACACTAGACCTTATGACTCCACCTTTTCCATATCCACCTTTTGGGCCTCCAAATCCACCACCAAATACTCCACCACCAAGCCCAGGAATATTAAACCCTCCACCAGGCCCAAATATCCCACCAAAACCCACATCGCCACCGTTATTATTTCTGACTTCGCCACTGCCTTTCTTTGTTTTTCCAACCCCGTGTTTATTCGGGTGAATGTGTCTTGTAGCAATGGTGGAATTGAATGTTATGATGAGCAATAGAGCTAAGAGAGTAATGGAGATTTTCTTCATTTTTTTTTTGGTGAAAGAGAGAGGAGAAGAATTGAGTAATATTTATGGGAAAAGAGAGAGTTATAAGGAGATGG</genome_strand>
        <mrna_strand>TCACCATGAATCCTATTACTTGTATCATAAAAATGTAAAACTTAGCTAACATAATATATTGTTCCACATGACAAAACAAATACAACCAAACAACACATATTATAAGTAATATAAATATAACAAATAACTTACTTAGGTATATTTTATTTTTTTTTTGGGTGGGGGTGGGGTTAACAATAAGCAAGACATTTCTTCTTGCAATCCATAGTACATCCACCAGATCCACCACCAAAACCATAACCTTTTCCAGCACTAGAATATGATTTATAACATTTTGCTGGACATATTAATTTCATACCAAAACATGGGCCTTTTACTTTACACACAACACTAGACCTTATGACTCCACCTTTTCCATATCCACCTTTTGGGCCTCCAAATCCACCACCAAATACTCCACCACCAAGCCCAGGAATATTAAACCCTCCACCAGGCCCAAATATCCCACCAAAACCCACATCGCCACCGTTATTATTTCTGACTTCGCCACTGCCTTTCTTTGTTTTTCCAACCCCGTGTTTATTCGGGTGAAAGTGTCTTGTAGCAATGGTGGAATTGAATGTTTTGATGAGCAATAGAGCTAAGAGAGTAATGGAGATTTTCTTCATTTTTTTTTTGGTGAAAGAGAGAGGAGAAGAATTGAGTAATATTTATGGGAAAAGAGAGAGTTATAAGGAGATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U571516" ref_strand="+" ref_description="SGN-U571516 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|157329172|emb|CAO24601.1| (e_value=2e-108) unnamed; (*ATH) AT5G54390.1 (e_value=3e-81)  Symbol: None | inositol monophosphatase family protein, similar to SP:Q42546 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) {Arabidopsis thaliana}; contains Pfam profile PF00459: Inositol monophosphatase family; supporting cDNA gi:1354509:gb:U5520... ; (*SWP) sp|Q38945|DPNPH_ARATH (e_value=3e-80) PAP-specific phosphatase HAL2-like OS=Arabidopsis thaliana GN=AHL; ">
      <seq>ttctttattcatctataaaagaaaaaaaaactaatctttataatgtcttcttgtactactagcttttcaaccaaagtgtcaccaacttttaggaagaatgatattttcctgaaaaaacaaatgttgggaactatttctttttcttccaagaaagattcttacttgggtttcactgcccaaactagtagtcaaacagattttgtgtctgcaatggatgaagattgtaaattggaattgaaatcgaattatatatcagatgggtattgtaaagaattggagattgctgtaagagctgttcatatggcttgtttgctctgccagagggttcaagaaaatttgttatctgaaacctctgaacatgttcattctaaggaggatgactctcctgtcacaattgctgattggagcgtccaagcaattgtcagctgggtactgtccgaggcttatggcagtaacgtctctattgttgctgaagaagatgtagaagctctttccaaggctagcgcagctggtctgttagaagcagtagtaagaactgtgaatgagtgtctagccgatgctcctcgttttggactgaaaggtcctggtactgatctggatgctaaagctgttcttgaggccataagtcgttgcagcttagcaggtgccagaggtagcaagttttgggtactggatcctgttgatggcacgttgggtttcgtgcgtggagatcaatatgccattgctttggcattgatagaagacggagaacctgtgcttggggttctcggatgtccaaattatcctatgaagaaggaatggcttagttatcaaaatggttataggagaatcttatctaggttgagctcctctacatctgaatcttcggatagaggttctgtactttatgcaaggaaaggtggcggcagggcctggatgcaaccgttactgcgcggagaaagtaagtttgtgtggccaaacgctgcaagggaaattagagtatcctccatcgataacccagcactagctaccttttgtgaaccagttgagaaggcaaattcaagccattcattcacagcaggactggctcatagtgttggacttcggaaccagccgttacgtgtatacagcatggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="-" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="70622" stop="67335"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70322" g_stop="69923" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="400" r_length="400" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69922" i_stop="68586" i_length="1337">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68585" g_stop="67901" g_length="685"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="1085" r_length="685" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67900" i_stop="67665" i_length="236">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.619" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67664" g_stop="67635" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1086" r_stop="1115" r_length="30" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="-" ref_id="SGN-U571516" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1115</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U571516" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70322" e_stop="69923"/>
          <exon e_start="68585" e_stop="67901"/>
          <exon e_start="67664" e_stop="67635"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTTATTCATCTATAAAAGAAAAAAAAACTAATCTTTATTATGTCTTCTTGTACTACTAGCTTTTCAACCAAAGTGTCACCAACTTTTAGGAAGAATGATATTTTCCTGAAAAAACAAATGTTGGGAACTATTTCTTTTTCTTCCAAGAAAGATTCTTACTTGGGTTTCACTGCCCAAACTAGTAGTCAAACAGATTTTGTGTCTGCAATGGATGAAGATTGTAAATTGGAATTGAAATCGAATTATATATCAGATGGGTATTGTAAAGAATTGGAGATTGCTGTAAGAGCTGTTCATATGGCTTGTTTGCTCTGCCAGAGGGTTCAAGAAAATTTGTTATCTGAAACCTCTGAACATGTTCATTCTAAGGAGGATGACTCTCCTGTCACAATTGCTGGTATGTCTTCTTGTTGTTCTATATATTGTGTTTTGGTGAATTGGGTTTTTGTAGGTGAATTGGGGAAGGAGAAAGATTGTGTCTTTTTGCTTTTTTGAGTATTCATTTTGGATATTGTTGATTAGATAGTATGGGTAGGAGTGTGTGGTTTGGGATCCTTATCTCGTGAGCTAGCTTTTAGGATTAAATTACATTATTTAATTTTATTTGGAGTTCTATGTAGTCCATGTTTTCTCCTGTGAAATGGAACATACTTTTTTGGTTTTCTGTAGTGCTATTGAAGTTGTGTGGGAGTTAAAGCATACTAACCTAATTAATCTTCGAGTGTATTTGTTTAAACTTTAAAGCTCACAATGTATAAAGACAACCTAATGCACTATGTACTGTTATGTTTTACGACTTGTAGACTTCTAAAAAAGCACAAAATAACAGTCATTCAAGCCAAGTCATTGATGCCTTTCTCTTTGTGATGAGTTGCTGCCTTGTCCAAATATGTTTGTTGAGAAAAGTAACAGGAAGAGTCAAAGAGAAACAAGAAAAGATTTTGTGTTGTACTCCTACATGATCATTTAGTTATTAAATTTATAAATAAGTGTATATGATCGTCTTTTTTTTTTTTCGTCACTGAGTTTCAAGGAAACAAACATAAATCATAAAGTTACCATACAACATTGAGGTAACCACAATCTTCTCCGAAGGTGGCATCCCTCGTGATGGGAACAGTTTGATGATCATGGCTGGATATTGAATTCCATTCATTTTTACTCAACAAATCCATTAATATATCCTTTTTGTCTCCCAAGAAGTAATAATCTGGTCTAAGAAACTTTTTAACATAAATATTATCATTGTCTGATTTATAGTAGGAAACTTTACTGGTGATGATAGACTGAAGATTATGTCATTTATGTTGTAAATACTGACAATAAAAGAACATATGACATACAAGGTTGTACTATCTTAATAAGAGAATTATAGAATCAGAATCATAAGATGTCCCAGACTGGGACTGAAGAAGATTTTATCTCTGAGGAGCAAGTGCTCTGTCTCTAAAACTATATCCATCTCTTTCCTGTTTCTATCTATATAACATGGAATCATTTATGGGTAAGTCTACTTTTATGTCACAAAGTTGAACGGGTGTGACATGGGTATAGGTGCTTCATGCTGAGTTTTCAAATTAAATTACAATAAAAATTGACGTGAAAACAAATATGGATCCATGTAACATTAGGTGCAATTTTGGTCCAATGCATTAAGTTGGACCTAAATCTTCAAACGTGAAAGCATCAAGCTTTACTTTCTGATGTCATGCTGTGGTTTTCATTACTTGTTAGATTGGAGCGTCCAAGCAATTGTCAGCTGGGTACTGTCCGAGGCTTATGGCAGTAACGTCTCTATTGTTGCTGAAGAAGATGTAGAAGCTCTTTCCAAGGCTAGCGCAGCTGGTCTGTTAGAAGCAGTAGTAAGAACTGTGAATGAGTGTCTAGCCGATGCTCCTCGTTTTGGACTGAAAGGTCCTGGTACTGATCTGGATGCTAAAGCTGTTCTTGAGGCCATAAGTCGTTGCAGCTTAGCAGGTGCCAGAGGTAGCAAGTTTTGGGTACTGGATCCTGTTGATGGCACGTTGGGTTTCGTGCGTGGAGATCAATATGCCATTGCTTTGGCATTGATAGAAGACGGAGAACCTGTGCTTGGGGTTCTCGGATGTCCAAATTATCCTATGAAGAAGGAATGGCTTAGTTATCAAAATGGTTATAGGAGAATCTTATCTAGGTTGAGCTCCTCTACATCTGAATCTTCGGATAGAGGTTCTGTACTTTATGCAAGGAAAGGTGGCGGCAGGGCCTGGATGCAACCGTTACTGCGCGGAGAAAGTAAGTTTGTGTGGCCAAACGCTGCAAGGGAAATTAGAGTATCCTCCATCGATAACCCAGCACTAGCTACCTTTTGTGAACCAGTTGAGAAGGCAAATTCAAGCCATTCATTCACAGCAGGACTGGCTCATAGTGTTGGACTTCGGTAAATATCTCTCACAATTCCCTCTCGTATTCCAAAACTGATCTTCCTATCTTCCAGTCAACGTGTGTAACTTTCAAGATTCTATATTTACGATTGCTTACTAGTTGTCTTAGCATGTCGCATCTATTTCTGGATATGTTTTTCCCATGACAGCTATAATGCAATGCAACCTCTAGTATGATGTTGATGCATTCAAGATGTCTTATAAATCTCAGCTAACAGCATATGAACTGCAGGAACCAGCCGTTACGTGTATACAGCATGGT</genome_strand>
        <mrna_strand>TTCTTTATTCATCTATAAAAGAAAAAAAAACTAATCTTTATAATGTCTTCTTGTACTACTAGCTTTTCAACCAAAGTGTCACCAACTTTTAGGAAGAATGATATTTTCCTGAAAAAACAAATGTTGGGAACTATTTCTTTTTCTTCCAAGAAAGATTCTTACTTGGGTTTCACTGCCCAAACTAGTAGTCAAACAGATTTTGTGTCTGCAATGGATGAAGATTGTAAATTGGAATTGAAATCGAATTATATATCAGATGGGTATTGTAAAGAATTGGAGATTGCTGTAAGAGCTGTTCATATGGCTTGTTTGCTCTGCCAGAGGGTTCAAGAAAATTTGTTATCTGAAACCTCTGAACATGTTCATTCTAAGGAGGATGACTCTCCTGTCACAATTGCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGAGCGTCCAAGCAATTGTCAGCTGGGTACTGTCCGAGGCTTATGGCAGTAACGTCTCTATTGTTGCTGAAGAAGATGTAGAAGCTCTTTCCAAGGCTAGCGCAGCTGGTCTGTTAGAAGCAGTAGTAAGAACTGTGAATGAGTGTCTAGCCGATGCTCCTCGTTTTGGACTGAAAGGTCCTGGTACTGATCTGGATGCTAAAGCTGTTCTTGAGGCCATAAGTCGTTGCAGCTTAGCAGGTGCCAGAGGTAGCAAGTTTTGGGTACTGGATCCTGTTGATGGCACGTTGGGTTTCGTGCGTGGAGATCAATATGCCATTGCTTTGGCATTGATAGAAGACGGAGAACCTGTGCTTGGGGTTCTCGGATGTCCAAATTATCCTATGAAGAAGGAATGGCTTAGTTATCAAAATGGTTATAGGAGAATCTTATCTAGGTTGAGCTCCTCTACATCTGAATCTTCGGATAGAGGTTCTGTACTTTATGCAAGGAAAGGTGGCGGCAGGGCCTGGATGCAACCGTTACTGCGCGGAGAAAGTAAGTTTGTGTGGCCAAACGCTGCAAGGGAAATTAGAGTATCCTCCATCGATAACCCAGCACTAGCTACCTTTTGTGAACCAGTTGAGAAGGCAAATTCAAGCCATTCATTCACAGCAGGACTGGCTCATAGTGTTGGACTTCG............................................................................................................................................................................................................................................GAACCAGCCGTTACGTGTATACAGCATGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584717" ref_strand="+" ref_description="SGN-U584717 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|218187571|gb|EEC69998.1| (e_value=9e-51) hypothetical; (*ATH) AT5G05450.1 (e_value=2e-49) | Symbol: None | DEAD/DEAH box helicase, putative (RH18) | chr5:1612050-1615337 FORWARD | Aliases: K18I23.26, K18I23_26; (*SWP) sp|Q761Z9|RH18_ORYSJ (e_value=2e-51) DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica GN=Os01g0164500; ">
      <seq>gtgactaatgaattctgtctgttactgatgttcctttttttctagatacgatcagcagcaaagaaagatcgtgatgtaatggagaaaggactcagagcctttgtatcatacatccgtgcatataaagagcaccactgctcttacatcttaaggtggaaggagcttgagatcgggaagctgggcatgggatatggtcttctgcagcttccttctgtgcctgatgtgaaacatcattctctttctacaaagggattcactgctgttgaagatatcaacctggacaacatcaagtttaaggacaagtcgagagagaagcaaagaaagaaaaatttacaagtgaaaaaagctgcaatggcacaacaacaagaacagaagacacagagacttaaaaaagaagcaaactctacagcaagtgccttgagaaagagaactgccaaacaaagacgtgctacacagttggttgaagatgaagatgagatcacacgggagtaccggttattgaaaaagctaaaaaagggagctatcgatgagaatgagtttgcaaaattgactggcacagaagacttgctttctgacatatgatttaaacatctaggcacaaattctgctggtctaatgcattcatatgtggtggtgattgcagatgttacactagttaccaagcaaagaaagataagtatatgtctggtctggtcacccagaaactgaatttcatcaagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="-" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="77058" stop="75570"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76759" g_stop="76609" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="152" r_length="152" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76608" i_stop="76531" i_length="78">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76530" g_stop="76387" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="296" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76386" i_stop="76295" i_length="92">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="76294" g_stop="75870" g_length="425"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="721" r_length="425" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="-" ref_id="SGN-U584717" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584717" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76759" e_stop="76609"/>
          <exon e_start="76530" e_stop="76387"/>
          <exon e_start="76294" e_stop="75870"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGACTAATGAATTCTGTCTGTTACTGATGTTCC-TTTTTTCTAGATACGATCAGCAGCAAAGAAAGATCGTGATGTAATGGAGAAAGGACTCAGAGCCTTTGTATCATACATCCGTGCATATAAAGAGCACCACTGCTCTTACATCTTAAGGTAAGTTAAGGCCATGGTGCAATACAAAAATTACAGTAGTTGCATTTCCACATCTTCAGCTTAGTCTTCTATTTACAGGTGGAAGGAGCTTGAGATCGGGAAGCTGGGCATGGGATATGGTCTTCTGCAGCTTCCTTCTGTGCCTGATGTGAAACATCATTCTCTTTCTACAAAGGGATTCACTGCTGTTGAAGATATCAACCTGGACAACATCAAGTTTAAGTAAGTTTATTCTCATAAGATTGGTCAGTAAATGTTAGATCTGTTGTGGGGTGTTGGCCTTTGATACTTAGCTATTACTTTTTTCCATTCAGGGACAAGTCGAGAGAGAAGCAAAGAAAGAAAAATTTACAAGTGAAAAAAGCTGCAATGGCACAACAACAAGAACAGAAGACACAGAGACTTAAAAAAGAAGCAAACTCTACAGCAAGTGCCTTGAGAAAGAGAACTGCCAAACAAAGACGTGCTACACAGTTGGTTGAAGATGAAGATGAGATCACACGGGAGTACCGGTTATTGAAAAAGCTAAAAAAGGGAGCTATCGATGAGAATGAGTTTGCAAAATTGACTGGCACAGAAGACTTGCTTTCTGACATATGATTTAAACATCTAGGCACAAATTCTGCTGGTCTAATGCATTCATATGTGGTGGTGATTGCAGATGTTACACTAGTTACCAAGCAAAGAAAGATAAGTATATGTCTGGTCTGGTCACCCAGAAACTGAATTTCATCAAGCA</genome_strand>
        <mrna_strand>GTGACTAATGAATTCTGTCTGTTACTGATGTTCCTTTTTTTCTAGATACGATCAGCAGCAAAGAAAGATCGTGATGTAATGGAGAAAGGACTCAGAGCCTTTGTATCATACATCCGTGCATATAAAGAGCACCACTGCTCTTACATCTTAAG..............................................................................GTGGAAGGAGCTTGAGATCGGGAAGCTGGGCATGGGATATGGTCTTCTGCAGCTTCCTTCTGTGCCTGATGTGAAACATCATTCTCTTTCTACAAAGGGATTCACTGCTGTTGAAGATATCAACCTGGACAACATCAAGTTTAA............................................................................................GGACAAGTCGAGAGAGAAGCAAAGAAAGAAAAATTTACAAGTGAAAAAAGCTGCAATGGCACAACAACAAGAACAGAAGACACAGAGACTTAAAAAAGAAGCAAACTCTACAGCAAGTGCCTTGAGAAAGAGAACTGCCAAACAAAGACGTGCTACACAGTTGGTTGAAGATGAAGATGAGATCACACGGGAGTACCGGTTATTGAAAAAGCTAAAAAAGGGAGCTATCGATGAGAATGAGTTTGCAAAATTGACTGGCACAGAAGACTTGCTTTCTGACATATGATTTAAACATCTAGGCACAAATTCTGCTGGTCTAATGCATTCATATGTGGTGGTGATTGCAGATGTTACACTAGTTACCAAGCAAAGAAAGATAAGTATATGTCTGGTCTGGTCACCCAGAAACTGAATTTCATCAAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U599135" ref_strand="+" ref_description="SGN-U599135 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157351246|emb|CAO41433.1| (e_value=3e-20) unnamed; (*ATH) AT5G05450.1 (e_value=3e-26) | Symbol: None | DEAD/DEAH box helicase, putative (RH18) | chr5:1612050-1615337 FORWARD | Aliases: K18I23.26, K18I23_26; (*SWP) sp|Q9FLB0|RH18_ARATH (e_value=2e-25) DEAD-box ATP-dependent RNA helicase 18 OS=Arabidopsis thaliana GN=RH18; ">
      <seq>cagctggccttcatattgagtatttggaatgtgaagcggacaagaaatcatcgcagcttgtacacctcataacaaagaacaagtcaaaaaaaattatagtgtgagcttactttcctggaatcttgaattgtatatcatatatttttacatacctgcatagatggtaggagatcacgttggtgtttagtacttggtattttttactcctgcagttatttcatgacttgtgcttgtgttgattattggggaactgttcttccacgtctctcttgtctgaaaagtttttcattgatctctcttcatggaaggatgaagcatagtgcaagggagaaagcactagcatcatttacatctctttccagtggggttcttttatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="-" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="79450" stop="78258"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79153" g_stop="79134" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="20" r_length="20" r_score="0.900"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79133" i_stop="79036" i_length="98">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79035" g_stop="78738" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="318" r_length="298" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="78737" i_stop="78618" i_length="120">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.875" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78617" g_stop="78558" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="378" r_length="60" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="-" ref_id="SGN-U599135" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>378</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U599135" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79153" e_stop="79134"/>
          <exon e_start="79035" e_stop="78738"/>
          <exon e_start="78617" e_stop="78558"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTGGCCTTCATATTGAGGTATGCTCCCACTGTTTCACAGTGTTTGTTTGTTTCTAAAGAATTTATTTATATCAAGGAATAGGTTACCATATTCTAATGTCCCTTCAATTTGGCAGTATTTGGAATGTGAAGCGGACAAGAAATCATCGCAGCTTGTACACCTCATAACAAAGAACAAGTCAAAAAAAATTATAGTGTGAGCTTACTTTCCTGGAATCTTGAATTGTATATCATATATTTTTACATACCTGCATAGATGGTAGGAGATCACGTTGGTGTTTAGTACTTGGTATTTTTTACTCCTGCAGTTATTTCATGACTTGTGCTTGTGTTGATTATTGGGGAACTGTTCTTCCACGTCTCTCTTGTCTGAAAAGTTTTTCATTGATCTCTCTTCATGGAAGGATGAAGCAGGTACATTTATTGACGTCTTAATAATAAAGGTCTATTATTTTATGAAATTGTTAATTAAGGCCTATTATTTAAAGAAGGTTCTATAGCAGCTCAGGAAATTAACTCTCTTATATTTTGTAGAGTGCAAGGGAGAAAGCACTAGCATCATTTACATCTCTTTCCAGTGGTGTTCTTTTATGC</genome_strand>
        <mrna_strand>CAGCTGGCCTTCATATTGAG..................................................................................................TATTTGGAATGTGAAGCGGACAAGAAATCATCGCAGCTTGTACACCTCATAACAAAGAACAAGTCAAAAAAAATTATAGTGTGAGCTTACTTTCCTGGAATCTTGAATTGTATATCATATATTTTTACATACCTGCATAGATGGTAGGAGATCACGTTGGTGTTTAGTACTTGGTATTTTTTACTCCTGCAGTTATTTCATGACTTGTGCTTGTGTTGATTATTGGGGAACTGTTCTTCCACGTCTCTCTTGTCTGAAAAGTTTTTCATTGATCTCTCTTCATGGAAGGATGAAGCAT........................................................................................................................AGTGCAAGGGAGAAAGCACTAGCATCATTTACATCTCTTTCCAGTGGGGTTCTTTTATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U582888" ref_strand="+" ref_description="SGN-U582888 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|157351246|emb|CAO41433.1| (e_value=2e-99) unnamed; (*ATH) AT5G05450.1 (e_value=2e-95) | Symbol: None | DEAD/DEAH box helicase, putative (RH18) | chr5:1612050-1615337 FORWARD | Aliases: K18I23.26, K18I23_26; (*SWP) sp|Q9FLB0|RH18_ARATH (e_value=1e-94) DEAD-box ATP-dependent RNA helicase 18 OS=Arabidopsis thaliana GN=RH18; ">
      <seq>gatgggaaagtagaaattatttttaatatacaagagtaaaccgggtagcagccaaaccggaccggaaaaactttgtaaatcggttcttattcgactcggtcggttgtaattactagcacagttgggttgaagaaaaactagcgagtgcggcgggcatggcgtcggcgaatcagaacaaagctttaacgaatactcgtttctccgacctcgaaccacggcttgctgagccagttttggaagccctaaccaactccggcttcgagttctgtactcctgttcaggccgccaccatacccttactctgcagctacaaggatgtcaccgttgacgccgccactggctctggtaaaaccctagccttcgttttacctgtggttgagatcatccgtcgatcctcttctaatcccaaacctcacaaggtaatgggtataattatatcaccaaccagggagttgtcgtcacaaatatttcatgttgctcagccattcatttccacattagcaaatgttaggcctatgcttcttgttggaggattagaagtaaaggcagatatcaaaaagatagaggaggaaggagcaaatttgttgattgggacacctgggaggctatatgacataatggagcgcctggatatactggactttcgggatcttgagatcctgatattagacgaggctgataggctattaggcatgggattcgagaagcagctaaattcaatcatttctcgtttacctaagcttcgtagaacgggtctcttctctgctactcaaactgaagcagttgaagaactatcaaaggcaggattgcgaaatcctgtcnnggntngaagttcgggcagaagcaaaacagttgagcggatctgcatctgggaattcgacctcgtcaaaaacnccttctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="-" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="81967" stop="78847"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81667" g_stop="81249" g_length="419"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="419" r_length="419" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81248" i_stop="80284" i_length="965">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80283" g_stop="80047" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="656" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80046" i_stop="79392" i_length="655">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.767" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="79391" g_stop="79147" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="657" r_stop="902" r_length="246" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="-" ref_id="SGN-U582888" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>901</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U582888" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81667" e_stop="81249"/>
          <exon e_start="80283" e_stop="80047"/>
          <exon e_start="79391" e_stop="79147"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGGGAAAGTAGAAATTATTTTTAATATACAAGAGTAAACCGGGTAGCAGCCAAACCGGACCGGAAAAACTTTGTAAATCGGTTCTTATTCGACTCGGTCGGTTGTAATTACTAGCACAGTTGGGTTGAAGAAAAACTAGCGAGTGCGGCGGGCATGGCGTCGGCGAATCAGAACAAAGCTTTAACGAATACTCGTTTCTCCGACCTCGAACCACGGCTTGCTGAGCCAGTTTTGGAAGCCCTAACCAACTCCGGCTTCGAGTTCTGTACTCCTGTTCAGGCCGCCACCATACCCTTACTCTGCAGCTACAAGGATGTCACCGTTGACGCCGCCACTGGCTCTGGTAAAACCCTAGCCTTCGTTTTACCTGTGGTTGAGATCATCCGTCGATCCTCTTCTAATCCCAAACCTCACAAGGTAATAAGGTTCCTCCTTCTGCTTTACGAGACCTGTTTAGGCTTTTACTTATGTAAAGTATGAAAGCATTTGCGCCGGCACCAGTGTTTAGATTTGTTAGGTAGGAAAATTTGGGGCTTTGCTGTAACATATTGATTACATACAGAGAACCCCGGAGCTAAAATTGATATAGCTTATAATGAATATAGTATTCCCAATTTGAGGTATGTGAGCTAAATATGATTAAGATGCTTGAGTACTAGTATTTTAAGTATTAACCGGCCTGTCATGAAGGATTTTGATATAAGCTAGAAACAGATGCAGTTGCGCTCATTTGTACCAAGTCAAGTTTCATAGTAGTTCTAGAGGACATTCAAATTTGACTATAGAATGGTACTTATACAAATACATATGCTTGTGGGAAACAATGGCACTGTCATCCACTTCACTTGTTTTGGAAGTGGACTCTGCTGATTGACTTTGTAAAAAATGAGTCACTTGGTTATTGGTATTTTTGAAGACATTGATTTTGCTGGTTAATATTGTCAAGTTGGATCATTTATGGTGTTTCTGGTTTGGAATATTTCCAACTTAAGGGATCTTCGGTGTACCAGTTTGAACTTGATTCAGCAGTAGTTGCCAGTTGGGAGGTACTGTAAGATTATAAAGACCGGAGGTTGCTCTCTGGTGCTTCAATTGTTGTCTCGTTATTGTTTGCCAGTGTTGCTGTCAACCCTAGAAATAGTTACAATAGATAAATAAAGCCGTGGCCGTACATTACAAACAAAAGGCACTGACTCATCTGTGCCGCACATGTTATACTCTGTAAAATTTGATCTTCCATGCTTAAGGCATTATGTTCTATCCAAATAGACCCATTTGACAACCAATAAAGATCCTTGTGATATACTTCCCTTTCTGTTTTTTTCCTTTAATTCTACTTTGTCCTCTTTTTGTGTTTAGCTGTCTCTTTGATGCCTTTGCAGGTAATGGGTATAATTATATCACCAACCAGGGAGTTGTCGTCACAAATATTTCATGTTGCTCAGCCATTCATTTCCACATTAGCAAATGTTAGGCCTATGCTTCTTGTTGGAGGATTAGAAGTAAAGGCAGATATCAAAAAGATAGAGGAGGAAGGAGCAAATTTGTTGATTGGGACACCTGGGAGGCTATATGACATAATGGAGCGCCTGGATATACTGGACTTTCGGGATCTTGAGGTGCTACTTTATGCCTCCTTCAGTGGTGCTCAAGTGCTATAGTGATTTTTAAGCTGTTAATTATTTGTTTACTATTAAAGAAAGCTAACTTGGTAATTTAGGAGTATCAAATTCTTTTGCTCGGTGCTGCAGTATGTCTTTAGCTGCTAACCATTTGTTTACTCTTAAAGATTAAGTTTGCTTGGGATTTAGAGTGTCAAATCTTTTACTTGATAGATGATAATCTATGTTTTGCATATGATACTTTAAAAAGGAAAAATGAAGTTGCCATATGCCCTGTGTTTAAACCATTTAGCTGCATATAAAGCTTTCCATTTGTGCACTTAAGTAATGCTAAATTCAGCCTTACCCCAGAAGGAGTTAAGTTTTACCTCCTAGATCATACGTTCATACTCAAGGCTGACTTTCATGATTGCCTATAATCACATTCTGACTTAAGTGGTCTCTGATTTCCTACATTTAAAAAGAAAAATTAGTCTCTGATTTCCTACATGTTCTTACAGCAGTCAATTGGCTGTCAATAAATAGAACAATGGGCTTCGAGTTCACCCCCTTTCCTCAACCTTCTTTTGTCCATGTGTGTTCAGGATTTGGTAGTGATATATGAAATACTACATCTCAATTAGCCACTCAGAAAAAACCATCTCATTTGCAGATCCTGATATTAGACGAGGCTGATAGGCTATTAGGCATGGGATTCGAGAAGCAGCTAAATTCAATCATTTCTCGTTTACCTAAGCTTCGTAGAACGGGTCTCTTCTCTGCTACTCAAACTGAAGCAGTTGAAGAACTATCAAAGGCAGGATTGCGAAATCCTGTC-AGGGTTGAAGTTCGGGCAGAAGCAAAACAGTTGAGCGGATCTGCATCTGGGAATTCGACCTCGTCAAAAACACCTTCTGG</genome_strand>
        <mrna_strand>GATGGGAAAGTAGAAATTATTTTTAATATACAAGAGTAAACCGGGTAGCAGCCAAACCGGACCGGAAAAACTTTGTAAATCGGTTCTTATTCGACTCGGTCGGTTGTAATTACTAGCACAGTTGGGTTGAAGAAAAACTAGCGAGTGCGGCGGGCATGGCGTCGGCGAATCAGAACAAAGCTTTAACGAATACTCGTTTCTCCGACCTCGAACCACGGCTTGCTGAGCCAGTTTTGGAAGCCCTAACCAACTCCGGCTTCGAGTTCTGTACTCCTGTTCAGGCCGCCACCATACCCTTACTCTGCAGCTACAAGGATGTCACCGTTGACGCCGCCACTGGCTCTGGTAAAACCCTAGCCTTCGTTTTACCTGTGGTTGAGATCATCCGTCGATCCTCTTCTAATCCCAAACCTCACAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATGGGTATAATTATATCACCAACCAGGGAGTTGTCGTCACAAATATTTCATGTTGCTCAGCCATTCATTTCCACATTAGCAAATGTTAGGCCTATGCTTCTTGTTGGAGGATTAGAAGTAAAGGCAGATATCAAAAAGATAGAGGAGGAAGGAGCAAATTTGTTGATTGGGACACCTGGGAGGCTATATGACATAATGGAGCGCCTGGATATACTGGACTTTCGGGATCTTGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGATATTAGACGAGGCTGATAGGCTATTAGGCATGGGATTCGAGAAGCAGCTAAATTCAATCATTTCTCGTTTACCTAAGCTTCGTAGAACGGGTCTCTTCTCTGCTACTCAAACTGAAGCAGTTGAAGAACTATCAAAGGCAGGATTGCGAAATCCTGTCNNGGNTNGAAGTTCGGGCAGAAGCAAAACAGTTGAGCGGATCTGCATCTGGGAATTCGACCTCGTCAAAAACNCCTTCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U568150" ref_strand="+" ref_description="SGN-U568150 Tomato 200607#2 [23 ESTs aligned] (*GB) gi|125558821|gb|EAZ04357.1| (e_value=0) hypothetical; (*ATH) AT2G29990.1 (e_value=0)  Symbol: None | pyridine nucleotide-disulphide oxidoreductase family protein, similar to SP:P32340 Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial precursor (EC 1.6.5.3) (Internal NADH dehydrogenase) {Saccharomyces cerevisiae} ; co... ; (*SWP) sp|Q55CD9|NDH_DICDI (e_value=7e-76) Probable NADH dehydrogenase OS=Dictyostelium discoideum GN=DDB_0238855; ">
      <seq>agcactccttaattgacctaagaaaaaaaccaaaacgtgtcgtttgttccaccgaaatggcagagttgcctctttcattttgccttcatctacagttgcatacatattttgcagcaaatcacccaaatgtttaaattatagcagtagagaacttgtatttgtgatttctccataccctttttgttttacattagaaaaaaaaaatgcatcagattttgaccaatattttcttgctgatcaaggttttgtctatataaaattaaagagggtcttttttttgaagtgtaaaagtaatactgttgactcctaatatcctggaaaatttcttatggggtttcatcttcttctttaaattcctaaagtgtcattcttaaacattgcataccatctatagtccaaacagtaattgccttaataaaaaatttcaacagtatcagcttcggtaaggggtactctgaaaatggcattggtaagggctgcaaggagtagctttaggcgttctggaggtgcaatcggaaactatgcaagtgagagaaatatattctgtgaaggcatatcaccatttagacatcctgcgccagtttttgaaaaagctgtaacaggtttcaattcatcatacattccaagtacccagatgataaatcaattaagtttcgggaacagaggaatgaagtttacccctcaatatcagtttccacatgcagcagctgagacggttgggggtgctgattcaaagaatgaaagatccagttatccaggccttgaagcaacaaaacagggcgaaaaacctagagtagttgttcttggatctggttgggccgcttgcagattcctcaaaggaatagacactagtatgtatgatgttgtttgtatagcaccaagaaaccatatggtctttacaccattgcttgcatctacttgtgttggaacattggaattccgatcagttgctgaaccagtcacccagatacagaaagcactggcaaaggatccaaattcatatttcttcctagcatcctgcactggtgttgatgctgataaacatgaagtatactgtgaaacggttggcgatcgtggagtctctcatgagcattacagatttaaggttgcatatgacaagcttgtcattgcttctggagctgaacctttgacctttggcataaagggagtggaggaacatgccttctttctccgtgaagtacagaatgcccaagaaatcaggaagaagcttcttatgaacttgatggtctcagaaactccaggcatctcggaagaagagaaagagcgcttgttgcactgtgttgtgattggaggtggacctacaggggttgaattcagcggggagctaagtgattttattatgagagatgtacgcgaacgttatgctcatgtcaaaaactacattcatgtgaccctcattgaggctaatgagattttgtcttcatttgatgttgggttgcgggagtatgcgacaaagcatttgaccaaggtaatgaatccttcaattgctttgcatcaagaaagaagtttcttcagtttctgtgagcaaaatttcatacatatcaggttggtgtccgccttgttcatggtgttgtaaaagaagtacatccagataaaatagttctcagtgatggaagtgatgttccatatggccttctcgtttggtctactggagttggtccttccaattttgttaaatcactaaatgttcccaagtctcctggtggaaggattggaattgatgaatggttgcgagttccttccgtagaagatgtgtttgctataggagattgtgctggttttcttgaacagactggaaagccggtgcttccggctcttgctcaggttgctgaaaggcaagggaagtatcttgttaaattgttcaccgacattgggaaacagaatggaggcaaagctctctcagccaaagacatcactctaggagatccatttgtttacaagcatcttggaagcatggcaactgtggggcgttacaaggctcttgttgatctccgtcaagctaagggtgagaagggtgtctcattagcaggcttcacgagctggcttatttggcggtccgcgtatctgactcgagttatcagctggaggaacaggttttacgtggctatgaactggggaacaacgttaatctttggcagagacaatactaagataggataaactaccacttctagtaggattttcatgttcttgatccattttttgaacacttctaataacctaccttgtagtgttatcaataatgttaatatctttgaggattgaaaaagaaaagggggaaaaagtgctttgtcaaaatggaattatgagggttggggcaagggatctttgacgacgttagagttataatgttacatcatttcaaaacgttattaaatattatgtcacatattatttttgttaagtattcataacaatatttcaaagaacatggaacatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="-" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="91846" stop="86089"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91546" g_stop="91185" g_length="362"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="362" r_length="362" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91184" i_stop="89749" i_length="1436">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.460" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89748" g_stop="89063" g_length="686"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="1048" r_length="686" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89062" i_stop="88765" i_length="298">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88764" g_stop="88551" g_length="214"/>
          <reference_exon_boundary r_type="cDNA" r_start="1049" r_stop="1262" r_length="214" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88550" i_stop="88407" i_length="144">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88406" g_stop="88246" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="1263" r_stop="1423" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="88245" i_stop="88149" i_length="97">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="88148" g_stop="87842" g_length="307"/>
          <reference_exon_boundary r_type="cDNA" r_start="1424" r_stop="1730" r_length="307" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="87841" i_stop="87748" i_length="94">
            <donor d_prob="0.907" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="87747" g_stop="87633" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1731" r_stop="1845" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="87632" i_stop="87188" i_length="445">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="87187" g_stop="87008" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="1846" r_stop="2025" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="87007" i_stop="86825" i_length="183">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="86824" g_stop="86389" g_length="436"/>
          <reference_exon_boundary r_type="cDNA" r_start="2026" r_stop="2461" r_length="436" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="-" ref_id="SGN-U568150" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2461</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U568150" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91546" e_stop="91185"/>
          <exon e_start="89748" e_stop="89063"/>
          <exon e_start="88764" e_stop="88551"/>
          <exon e_start="88406" e_stop="88246"/>
          <exon e_start="88148" e_stop="87842"/>
          <exon e_start="87747" e_stop="87633"/>
          <exon e_start="87187" e_stop="87008"/>
          <exon e_start="86824" e_stop="86389"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCACTCCTTAATTGACCTAAGAAAAAAACCAAAACGTGTCGTTTGTTCCACCGAAATGGCAGAGTTGCCTCTTTCATTTTGCCTTCATCTACAGTTGCATACATATTTTGCAGCAAATCACCCAAATGTTTAAATTATAGCAGTAGAGAACTTGTATTTGTGATTTCTCCATACCCTTTTTGTTTTACATTAGAAAAAAAAAATGCATCAGATTTTGACCAATATTTTCTTGCTGATCAAGGTTTTGTCTATATAAAATTAAAGAGGGTCTTTTTTTTGAAGTGTAAAAGTAATACTGTTGACTCCTAATATCCTGGAAAATTTCTTATGGGGTTTCATCTTCTTCTTTAAATTCCTAAAGGTAATTCCTTTTTTTCTTGTTCTGATTTCTTGAGGCTTTTCTAATGTATATATACATATATTATGCTGGATCTTGATTGTACCATGTACAGTTTCATCATTATTGAAACTTATGTTGTGACCTTATGAGTATGTAATTAATCATGTGCAAGTTTTTACTGCTATTTTTGAGTATGATGTTATATATTGAACACATAGGTGTTCTTGATCTAAGGGTGGATCCAGGATTCAATTGAACCCATAAACTATTTCTGTTACTAGGTTAAAAAAATTAATATTTTGACATATTAAGCTCAATACTGTTAATCCGCTCCTCTCTTGATCTATTTTGGCATAAGCTAACTCAATCCGAGATATAGCTCACGAGGGAAGGATTGTCCAAGATATCTAAGTTAAAGATGTTTGTTTTTCTTCTTGTCCATTTTGGTTGTAGAAATTCGAATGTCAAATTATGTGTAGCAGATTTTGGTAGGCTGATGTTTACAATCGTTTTTAATTCCGTAATGCTGTCATTGGTTTCTTCGACTGATTCTTTTTGGTGTACCTCTTGATTTTGCTTCTAGTTTTTACTTTTGATGGTTCAAGCTAATATATTTGTAGAATTAGATATTTTCTTGTATAGAAGATTGAACCTTTTAGTTGCTAACTAATCATATAACTTAATATGGATTGCTTGCATTGATGGCGATCACATTTCTTCCATTGCTAGACGTGTGTTCTGCCATTCCAAATTTGAACTTAAGTATGTCGTGTTCAGAAATTTAATCCAACGAACTTTTGCTGATTGTTAGTAACCTTGTGTCAACAAATAGTTTGTTTTAAGATTTGAAGCAATGAAATGCATAACCTATAATGTTATTGGAGTTTTATATGTACCATCAAGTTGTTGTGCAATGATATCATCATCTTGACAGAGGTTTGGATTTCATACACAGACTGACTAGAGAGAATTCAAATGCGAAATTCATATCTGGTATGTATTAGCAAAGCCTGAGCAAATAAACTTCAAATTGAAATTGGCATAGTAAGTATGGTTGCACTCTTCATTTTCTTGACCAGATTCTTGTAAAATCTGCTACCAATTTTGGAATTTGGCACTAACTGGTCATATTTGTCTAGAGTACTGAGATTGTAGTGAGTGTATGCAAGATCATGGTGTATTGTGAATCCAGGTGTTTTATATCTGCATCCATACTAAGAATTTTGCGAGAACACTTCACACTGAAACTGCCACAGTGTAGAAATGCAAATTTTGTCTTTCCTGTTTCTGCTAGTTGGTTTAGGAACCATCTTTGTCTTGCTTTTGTCTTGTCCTTGACTGATACGCTTAACTTCAATGTTTATTGTTTTTATTTTTCCACACTTACTGGGATCTTTTTTATGAGTGTATTGCAGCTTCGTATTGAGAGCTCACATCTACTTTCTTCCTTTTTTCAGTGTCATTCTTAAACATTGCATACCATCTATAGTCCAAACAGTAATTGCCTTAATAAAAAATTTCAACAGTATCAGCTTCGGTAAGGGGTACTCTGAAAATGGCATTGGTAAGGGCTGCAAGGAGTAGCTTTAGGCGTTCTGGAGGTGCAATCGGAAACTATGCAAGTGAGAGAAATATATTCTGTGAAGGCATATCACCATTTAGACATCCTGCGCCAGTTTTTGAAAAAGCTGTAACAGGTTTCAATTCATCATACATTCCAAGTACCCAGATGATAAATCAATTAAGTTTCGGGAACAGAGGAATGAAGTTTACCCCTCAATATCAGTTTCCACATGCAGCAGCTGAGACGGTTGGGGGTGCTGATTCAAAGAATGAAAGATCCAGTTATCCAGGCCTTGAAGCAACAAAACAGGGCGAAAAACCTAGAGTAGTTGTTCTTGGATCTGGTTGGGCCGCTTGCAGATTCCTCAAAGGAATAGACACTAGTATGTATGATGTTGTTTGTATAGCACCAAGAAACCATATGGTCTTTACACCATTGCTTGCATCTACTTGTGTTGGAACATTGGAATTCCGATCAGTTGCTGAACCAGTCACCCAGATACAGAAAGCACTGGCAAAGGATCCAAATTCATATTTCTTCCTAGCATCCTGCACTGGTGTTGATGCTGATAAACATGAAGTGAGTATAACAAGCTCTTATTATTTCTCACATCCAAAATATGTCTCAATTACAACATATAATTCCTCTTTTCAATTTGATCAAATATATAGACATGATTACCTACATCCATTCAGGTAATGTTTTTTAGGAAATTAGGACAGAGTCCTAGGTAAATGGCATACCGACCAGAGAATTATTAGAGCAATACATTCAAGTAGTTAAAGGGAAAGGGACTTTGTTTAAACTGCATTCAACTTATTATTGTGTTCCATCTATTATGTTTGTGTGTGTTTTGATTTGAGAAGACACAATACAGGTATACTGTGAAACGGTTGGCGATCGTGGAGTCTCTCATGAGCATTACAGATTTAAGGTTGCATATGACAAGCTTGTCATTGCTTCTGGAGCTGAACCTTTGACCTTTGGCATAAAGGGAGTGGAGGAACATGCCTTCTTTCTCCGTGAAGTACAGAATGCCCAAGAAATCAGGAAGAAGCTTCTTATGAACTTGATGGTCTCAGAAACTCCAGGTTATTCCCCCATGTTCCATAGTCTTTACTCTAGACGTACCAGACTTCTTTGGTAGATCTGGACTCTGTAGGATAATATATGACATCAACTTCACAATAGTAAATTGAATGTAGTATAAATTTTGTGCATGTGTATAATTGCAGGCATCTCGGAAGAAGAGAAAGAGCGCTTGTTGCACTGTGTTGTGATTGGAGGTGGACCTACAGGGGTTGAATTCAGCGGGGAGCTAAGTGATTTTATTATGAGAGATGTACGCGAACGTTATGCTCATGTCAAAAACTACATTCATGTGACCCTCATTGAGGTAAATATCCAGCTGTATATGGGTAAACCTAAAATTGCAGAGAAAATATCATTATGTTGACTGTTGAGTATGGTCTAGTAACACTTTCCATGGACAGGCTAATGAGATTTTGTCTTCATTTGATGTTGGGTTGCGGGAGTATGCGACAAAGCATTTGACCAAGGTAATGAATCCTTCAATTGCTTTGCATCAAGAAAGAAGTTTCTTCAGTTTCTGTGAGCAAAATTTCATACATATCAGGTTGGTGTCCGCCTTGTTCATGGTGTTGTAAAAGAAGTACATCCAGATAAAATAGTTCTCAGTGATGGAAGTGATGTTCCATATGGCCTTCTCGTTTGGTCTACTGGAGTTGGTCCTTCCAATTTTGTTAAATCACTAAATGTTCCCAAGTCTCCTGGTGGAAGGTACAAAGTTTTAACTTCTCCAACAACTTAGGTGCTTTGTGGTCCTTCGTTCACTCTTCTGTATCTAGTCAACTAATCCTAAGACATGTTACAGGATTGGAATTGATGAATGGTTGCGAGTTCCTTCCGTAGAAGATGTGTTTGCTATAGGAGATTGTGCTGGTTTTCTTGAACAGACTGGAAAGCCGGTGCTTCCGGCTCTTGCTCAGGTCAGTATAATTTCCTGATACGTCCTTGATTTGTCCGTCCATGTTATTCTTATGCATTTGCATTTCTCCTGCCCAGATCTTTTTTCCTGTAGTACTTTGCATGTTTTTTTCTTCTTGATCACGCTTAGTTTTATGTGGAATGGCCTCAATTGCAACCGTTTATGAACTTGACTGAGGCCTGAGTTTTAGTGAACAACCTTAAAGTTGCATGCTGTCAAGGATTACAGTGATTATGTTACTTGAAAGTTGACCAGTCATCCTTTTCTACTACAAGAATACAAGAAGCCGTCTTGTTGTCGTGTATTAGACATAACTAGGAGTAGATATTTACCCCTATCCTTCTTCTTGGGTTTCAAGAATTGAGTTATCTTGAGAAACTACTACATTTTCTTGAAAAATGACGGAGGAGTACAAAATTTTTCTCAAAGTGCAATTTTTTTAACAGGTTGCTGAAAGGCAAGGGAAGTATCTTGTTAAATTGTTCACCGACATTGGGAAACAGAATGGAGGCAAAGCTCTCTCAGCCAAAGACATCACTCTAGGAGATCCATTTGTTTACAAGCATCTTGGAAGCATGGCAACTGTGGGGCGTTACAAGGCTCTTGTTGATCTCCGTCAAGCTAAGGTACATTATATCCATCATCATCTCTATTACTCATCGACCAAAACATTTAGTCAGTCGGGGTTGTTGGACTCAGTGACTCTACATCTTGGATTCGTCTCTTCGTGTAATATCAATCAGGAAAGAGCTTGTCCTGTGTATATGTACCTTTCCATACTATGTTTTGATCTTTATTTTGTTTGTCAGGGTGAGAAGGGTGTCTCATTAGCAGGCTTCACGAGCTGGCTTATTTGGCGGTCCGCGTATCTGACTCGAGTTATCAGCTGGAGGAACAGGTTTTACGTGGCTATGAACTGGGGAACAACGTTAATCTTTGGCAGAGACAATACTAAGATAGGATAAACTACCACTTCTAGTAGGATTTTCATGTTCTTGATCCATTTTTTGAACACTTCTAATAACCTACCTTGTAGTGTTATCAATAATGTTAATATCTTTGAGGATTGAAAAAGAAAAGGGGGAAAAAGTGCTTTGTCAAAATGGAATTATGAGGGTTGGGGCAAGGGATCTTTGACGACGTTAGAGTTATAATGTTACATCATTTCAAAACGTTATTAAATATTATGTCACATATTATTTTTGTTAAGTATTCATAACAATATTTCAAAGAACATGGAACATT</genome_strand>
        <mrna_strand>AGCACTCCTTAATTGACCTAAGAAAAAAACCAAAACGTGTCGTTTGTTCCACCGAAATGGCAGAGTTGCCTCTTTCATTTTGCCTTCATCTACAGTTGCATACATATTTTGCAGCAAATCACCCAAATGTTTAAATTATAGCAGTAGAGAACTTGTATTTGTGATTTCTCCATACCCTTTTTGTTTTACATTAGAAAAAAAAAATGCATCAGATTTTGACCAATATTTTCTTGCTGATCAAGGTTTTGTCTATATAAAATTAAAGAGGGTCTTTTTTTTGAAGTGTAAAAGTAATACTGTTGACTCCTAATATCCTGGAAAATTTCTTATGGGGTTTCATCTTCTTCTTTAAATTCCTAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCATTCTTAAACATTGCATACCATCTATAGTCCAAACAGTAATTGCCTTAATAAAAAATTTCAACAGTATCAGCTTCGGTAAGGGGTACTCTGAAAATGGCATTGGTAAGGGCTGCAAGGAGTAGCTTTAGGCGTTCTGGAGGTGCAATCGGAAACTATGCAAGTGAGAGAAATATATTCTGTGAAGGCATATCACCATTTAGACATCCTGCGCCAGTTTTTGAAAAAGCTGTAACAGGTTTCAATTCATCATACATTCCAAGTACCCAGATGATAAATCAATTAAGTTTCGGGAACAGAGGAATGAAGTTTACCCCTCAATATCAGTTTCCACATGCAGCAGCTGAGACGGTTGGGGGTGCTGATTCAAAGAATGAAAGATCCAGTTATCCAGGCCTTGAAGCAACAAAACAGGGCGAAAAACCTAGAGTAGTTGTTCTTGGATCTGGTTGGGCCGCTTGCAGATTCCTCAAAGGAATAGACACTAGTATGTATGATGTTGTTTGTATAGCACCAAGAAACCATATGGTCTTTACACCATTGCTTGCATCTACTTGTGTTGGAACATTGGAATTCCGATCAGTTGCTGAACCAGTCACCCAGATACAGAAAGCACTGGCAAAGGATCCAAATTCATATTTCTTCCTAGCATCCTGCACTGGTGTTGATGCTGATAAACATGAA..........................................................................................................................................................................................................................................................................................................GTATACTGTGAAACGGTTGGCGATCGTGGAGTCTCTCATGAGCATTACAGATTTAAGGTTGCATATGACAAGCTTGTCATTGCTTCTGGAGCTGAACCTTTGACCTTTGGCATAAAGGGAGTGGAGGAACATGCCTTCTTTCTCCGTGAAGTACAGAATGCCCAAGAAATCAGGAAGAAGCTTCTTATGAACTTGATGGTCTCAGAAACTCCAG................................................................................................................................................GCATCTCGGAAGAAGAGAAAGAGCGCTTGTTGCACTGTGTTGTGATTGGAGGTGGACCTACAGGGGTTGAATTCAGCGGGGAGCTAAGTGATTTTATTATGAGAGATGTACGCGAACGTTATGCTCATGTCAAAAACTACATTCATGTGACCCTCATTGAG.................................................................................................GCTAATGAGATTTTGTCTTCATTTGATGTTGGGTTGCGGGAGTATGCGACAAAGCATTTGACCAAGGTAATGAATCCTTCAATTGCTTTGCATCAAGAAAGAAGTTTCTTCAGTTTCTGTGAGCAAAATTTCATACATATCAGGTTGGTGTCCGCCTTGTTCATGGTGTTGTAAAAGAAGTACATCCAGATAAAATAGTTCTCAGTGATGGAAGTGATGTTCCATATGGCCTTCTCGTTTGGTCTACTGGAGTTGGTCCTTCCAATTTTGTTAAATCACTAAATGTTCCCAAGTCTCCTGGTGGAAG..............................................................................................GATTGGAATTGATGAATGGTTGCGAGTTCCTTCCGTAGAAGATGTGTTTGCTATAGGAGATTGTGCTGGTTTTCTTGAACAGACTGGAAAGCCGGTGCTTCCGGCTCTTGCTCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCTGAAAGGCAAGGGAAGTATCTTGTTAAATTGTTCACCGACATTGGGAAACAGAATGGAGGCAAAGCTCTCTCAGCCAAAGACATCACTCTAGGAGATCCATTTGTTTACAAGCATCTTGGAAGCATGGCAACTGTGGGGCGTTACAAGGCTCTTGTTGATCTCCGTCAAGCTAAG.......................................................................................................................................................................................GGTGAGAAGGGTGTCTCATTAGCAGGCTTCACGAGCTGGCTTATTTGGCGGTCCGCGTATCTGACTCGAGTTATCAGCTGGAGGAACAGGTTTTACGTGGCTATGAACTGGGGAACAACGTTAATCTTTGGCAGAGACAATACTAAGATAGGATAAACTACCACTTCTAGTAGGATTTTCATGTTCTTGATCCATTTTTTGAACACTTCTAATAACCTACCTTGTAGTGTTATCAATAATGTTAATATCTTTGAGGATTGAAAAAGAAAAGGGGGAAAAAGTGCTTTGTCAAAATGGAATTATGAGGGTTGGGGCAAGGGATCTTTGACGACGTTAGAGTTATAATGTTACATCATTTCAAAACGTTATTAAATATTATGTCACATATTATTTTTGTTAAGTATTCATAACAATATTTCAAAGAACATGGAACATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U601322" ref_strand="+" ref_description="SGN-U601322 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gtttcatcttcttctttaaattcctaaaggtaattcctttttttcttgttctgatttcttgaggcttttctaatgtatatatacatatattatgctggatcttgattgtaccaggtacagtttcttcattattgaaacttatgttgtgaccttatgagtatgtaattaatcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="-" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="91513" stop="90741"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91213" g_stop="91041" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="-" ref_id="SGN-U601322" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>173</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U601322" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91213" e_stop="91041"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCATCTTCTTCTTTAAATTCCTAAAGGTAATTCCTTTTTTTCTTGTTCTGATTTCTTGAGGCTTTTCTAATGTATATATACATATATTATGCTGGATCTTGATTGTACCATGTACAGTTTCATCATTATTGAAACTTATGTTGTGACCTTATGAGTATGTAATTAATCAT</genome_strand>
        <mrna_strand>GTTTCATCTTCTTCTTTAAATTCCTAAAGGTAATTCCTTTTTTTCTTGTTCTGATTTCTTGAGGCTTTTCTAATGTATATATACATATATTATGCTGGATCTTGATTGTACCAGGTACAGTTTCTTCATTATTGAAACTTATGTTGTGACCTTATGAGTATGTAATTAATCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U569204" ref_strand="+" ref_description="SGN-U569204 Tomato 200607#2 [15 ESTs aligned] (*GB) gi|114144725|emb|CAJ87709.1| (e_value=4e-176) putative; (*ATH) AT1G11190.1 (e_value=3e-129) | Symbol: None | bifunctional nuclease (BFN1), identical to bifunctional nuclease bfn1 (Arabidopsis thaliana) gi:4099831:gb:AAD00693 | chr1:3750066-3752780 REVERSE | Aliases: T28P6.14, T28P6_14; (*SWP) sp|P24504|NUP3_PENSQ (e_value=7e-25) Nuclease PA3 OS=Penicillium sp.; ">
      <seq>tgactcttcagttcagtaccatttctagggtttattccacctcaaaaattattgtcattcttggatcttgaaccaccaaaacaacccctagctactggttgagtaatttgattggaaaagatgggtgggtttgagctcaaatggtttgtaggagtagctgttgttctgatgatggttcaaaatattcttggttgggggaaagagggacactatattatctgcaaaattgctgaggaatatctaacagaagatgctttagctgcagtcaaagcattactcccagatcaagccgaaggtgatcttgcagctgtctgctcctggcctgatgaggttcggcgccactaccactaccgctggagctctccattacattatgtagatacacctgatttcttgtgcaattacaaatattgccgagactgccatgacgggcatgggctcaaggacaggtgtgttacgggagcaatatacaactactcaatgcaactttcgcagggatattatgatttgaattcagaaaaatacaacttgactgaagcacttatgttcttgtctcattttgttggtgacgtacatcagcctctccatgttggtttcactggagatcttggtggaaacagtataattgttcgttggtacaggaggaagactaatttgcaccatgtatgggataacatgattattgaatctgcgttgaagacatactacaaatctgatataatgttaatgacacaagttcttctgaaaaacatcactcatgaatggtccgatgatgttccatcttgggaagattgcaaggagatggtttgtcctgacccatatgcttctgaaagtatccgtttggcctgcaaatttgcctacagaaatgcaaccccgggaagcactttaacagacgattacttcctctctcgtcttcctgttgtggagaagaggttggcacaaggtggggtccgcttggccgaagttctcaacagaattttcactaaaaaaccatcagatgctgcacaatgaagataaactgcagaagaaaaccactctatgtattcaattatccattataacttggaagtttccctcacgccaagaactgaaacctacttaagtgacttataagtcaactattgtattaaaatgggtgtaataaaatgttactttagatgcacaactagtccattattacatgatagatgctactatcatattggaatatgctgtatgttgcttttatggataatcaacctctattttactttttaagataagaggaatcttcagcttgtacacaacaagaaccatttcaacagtttttgtatatatagaacaagtccaagtttggtgggacacttccggttttcgatatctgtcaagttgtagaacttcttttgagaatgttgaggttaacttcattaagcagtattttctttctctgtgttgcttttatcaaccaacatggtgttgaagcatggagcaaagaggggcatgtgatgacttgtcgaatcgcgcagggcttgttgaatgatgaggcagctcatgcagtcaagatgttgttgccggaatatgttaacggtgacttatcggccctctgtgtgtggccagaccaagtcaggcactggtataagtataaatggacaagccctctacacttcattgatacaccagataaagcttgcaactttgattatgaaagggactgtcatgatcaacatggagtaaaggatatgtgtgttgctggtgcaattcagaactttactactcaactctctcattacagagagggaacttctgatcgtcgatataatatgacagaggctttgctgtttttgtcacatttcatgggagatatccatcaacctatgcatgttggatttacaagtgatgctggaggaaattctattgatttgcgctggtttaggcataaatcaaacttgcaccatgtgtgggatagggagataatactaacagctgcaaaagactactatgcgaaggatataaacctccttgaagaagacattgaagggaacttcactgacggaatttggtctgatgatcttgcttcttggagagaatgtggcaatgtcttttcttgcgtaaacaagtttgcaacggaaagtataaatatagcatgcaaatggggatacaaaggtgttgaagccggtgaaactttatcagatgattacttcaattcaagacttccaatagtaatgaaacgagtagcacaaggtggaataagattagcgatgcttttaaacaacgtttttggagcttctcaacaagaagattcagttgttgcaacttaattaccaaataattttaataaaatagtaatgaaaaaccatatattacttcatgtttgaccaaaataaaataaaaacactaaattagatgacacatctttgttgtatttaaattcgtgtaaattgtaattacccacagagatgtattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="-" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="106539" stop="94431"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106239" g_stop="106143" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="97" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106142" i_stop="106055" i_length="88">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106054" g_stop="105918" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="234" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="105917" i_stop="104758" i_length="1160">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104757" g_stop="104577" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="415" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104576" i_stop="104281" i_length="296">
            <donor d_prob="0.311" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104280" g_stop="104173" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="416" r_stop="523" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="104172" i_stop="104104" i_length="69">
            <donor d_prob="0.434" d_score="1.00"/>
            <acceptor a_prob="0.424" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="104103" g_stop="104048" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="524" r_stop="579" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="104047" i_stop="102915" i_length="1133">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="102914" g_stop="102831" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="580" r_stop="663" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="102830" i_stop="102413" i_length="418">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="102412" g_stop="102320" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="664" r_stop="756" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="102319" i_stop="101812" i_length="508">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="101811" g_stop="101750" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="757" r_stop="818" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="101749" i_stop="101686" i_length="64">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="101685" g_stop="101612" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="819" r_stop="892" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="101611" i_stop="97132" i_length="4480">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="97131" g_stop="96519" g_length="613"/>
          <reference_exon_boundary r_type="cDNA" r_start="893" r_stop="1505" r_length="613" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="96518" i_stop="96446" i_length="73">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="96445" g_stop="96265" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1506" r_stop="1686" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="96264" i_stop="96167" i_length="98">
            <donor d_prob="0.813" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="96166" g_stop="96059" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1687" r_stop="1794" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="96058" i_stop="95978" i_length="81">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="95977" g_stop="95922" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1795" r_stop="1850" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="95921" i_stop="95818" i_length="104">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="95817" g_stop="95734" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1851" r_stop="1934" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="95733" i_stop="95610" i_length="124">
            <donor d_prob="0.934" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="95609" g_stop="95514" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1935" r_stop="2030" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="95513" i_stop="95390" i_length="124">
            <donor d_prob="0.881" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="95389" g_stop="95325" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="2031" r_stop="2095" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="16">
          <gDNA_intron_boundary i_start="95324" i_stop="95188" i_length="137">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="17">
          <gDNA_exon_boundary g_start="95187" g_stop="95114" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="2096" r_stop="2169" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="17">
          <gDNA_intron_boundary i_start="95113" i_stop="95005" i_length="109">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="18">
          <gDNA_exon_boundary g_start="95004" g_stop="94731" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="2170" r_stop="2443" r_length="274" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="-" ref_id="SGN-U569204" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2443</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U569204" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106239" e_stop="106143"/>
          <exon e_start="106054" e_stop="105918"/>
          <exon e_start="104757" e_stop="104577"/>
          <exon e_start="104280" e_stop="104173"/>
          <exon e_start="104103" e_stop="104048"/>
          <exon e_start="102914" e_stop="102831"/>
          <exon e_start="102412" e_stop="102320"/>
          <exon e_start="101811" e_stop="101750"/>
          <exon e_start="101685" e_stop="101612"/>
          <exon e_start="97131" e_stop="96519"/>
          <exon e_start="96445" e_stop="96265"/>
          <exon e_start="96166" e_stop="96059"/>
          <exon e_start="95977" e_stop="95922"/>
          <exon e_start="95817" e_stop="95734"/>
          <exon e_start="95609" e_stop="95514"/>
          <exon e_start="95389" e_stop="95325"/>
          <exon e_start="95187" e_stop="95114"/>
          <exon e_start="95004" e_stop="94731"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACTCTTCAGTTCAGTACCATTTCTAGGGTTTATTCCACCTCAAAAATTATTGTCATTCTTGGATCTTGAACCACCAAAACAACCCCTAGCTACTGGTACAATTTATTTTTCCTTAGAATATGTTGTTTCTTTTTGTACTGTATGTGTACCTTTAAACTACAGAGTTATTTTCTTTTCTTGCAGGTTGAGTAATTTGATTGGAAAAGATGGGTGGGTTTGAGCTCAAATGGTTTGTAGGAGTAGCTGTTGTTCTGATGATGGTTCAAAATATTCTTGGTTGGGGGAAAGAGGGACACTATATTATCTGCAAAATTGCTGAGGTAAATTGAGTTTGTTTTTTTTTTGAAATGTTTGCTAAGCTATGTACTTTCTGAGTAAATTCTTGTGGAGATTGAGTGTTTAGAGTAATGGGGTGTTTAATGTTAATCTTTTTTGGTGGGTTTATTCATAAAGGTTGAATCTTTATGTATTCGCTTGCAAGAATTTGCGTTGACTAGTTATCTGATTTCCTATTTGGCATTGGCTGAAGTTTTTTTAGGGGTTTTATGGGTGTGCATCCATTGTTGCAGAATTGTAGGGTATAGTTGTTTGATAACCAACCCGAAATAGAACGAGCAAGTGCTCAGTAACCAAACCAAAGATTTAAGGAAATAAATAAAAGAAAAAAGCAAAATGGAGAAAGAAAAAGATAAAGACTTTCCTTCATTCATTAATGCTTTAATTTGTGGCTACAACTGGATATATCAGGAACAGCTGGACATTGTAGAAAACACCATCTTAACAAACTAGGGTACTAAAGAAATAAGAGAAAATTGGGACTACACTGTTGTTGATGGAAACTCAGAGATACTACTTGGAAGCTCATGATACTATCCGTTACATAGTAGGTAACTTGATCTGGCAATTATATAGTTACATCGAATCATAATGTTTATAAAAATAGATAGTCTTCGTGTGCTTCAAATGATGAAGGCATAATACATAGATAGATAGGCACTCAAATATGGCGTCAAATGGCAAGTTAACACTTCAACTTTAGTAGCGTACATCCAGACACCTCAACAACTCATCCCTACCGAGTCTCGTGGACACCCAATTCTAACGTGACACATAAATTTTGAAGATATGTGAATGATCATTTTGTAAGGTGGAGTGTTCAACTAACACACTAGAACGAGCTGAGGTGTCTAGATGTGCATTCTCAAAGTTGGAGTGTTTAGTTGTTAGTTGAAGACAAGTTAAGGTGTCATCTATGTATTATTATTGGAGGAAGATTCTTGAAATCCTTTTGAGATATTCCCAGAAACTTCTTATGGTGGACATATTTATGATTCTGACAGATTTTTATCAAATTAGGTGAAGTCTTTAATATTTTTCTTTGAGTGGAAGCAAGCATATGGAGAAGTACTGACAAAATAAAAATAAAAAATTGGTCGAGCTCTTCTTTTGGAAGCTTATGTGAATCTCTTGGGTTTTTCAGGAATATCTAACAGAAGATGCTTTAGCTGCAGTCAAAGCATTACTCCCAGATCAAGCCGAAGGTGATCTTGCAGCTGTCTGCTCCTGGCCTGATGAGGTTCGGCGCCACTACCACTACCGCTGGAGCTCTCCATTACATTATGTAGATACACCTGATTTCTTGTGCAATTACAAATATTGCCGTAAGTGACACTACATATAATTGCTTCTGTAGAAAAATTTCTTTTGGTATCAAGTTCACTCCCTGGATATCGAATGAAAAGAGAAATATGGAAAAATATTTCTAGCTCGTGTCTGCATTTCCTATTGTTACTTGGTTCACTGAAGTCAAAGTAGCTGTACTTGATCCAACGTTTCATAGTTGGCATTTTTTCTTTAATAACAATAAACCCTGATATGGCATCTTCAGATGAACCTTTTAATGCACTTTTGTATCTTAGCTTTGAGCCACTAATGACCTTGGTCTACTTTCTGATAGGAGACTGCCATGACGGGCATGGGCTCAAGGACAGGTGTGTTACGGGAGCAATATACAACTACTCAATGCAACTTTCGCAGGGATATTATGATTTGAATTCAGAAAAATGTGAGGAAGACTGCCCCTCTGTGTTATTGATGCATTTATTGGACTGGAGCTAATTGTTTCTAGTGACAGACAACTTGACTGAAGCACTTATGTTCTTGTCTCATTTTGTTGGTGACGTACATCAGGTCAGCTCACCTTTCTGGAACCTTGGTGTATGTAACTGTAAATAAACACAAATGTATGTGTCTGCATATAAATGTTTGGAACTATTTCGATAAGTTTCTTTCAGTCTTAAATACTTGATTAAAGAATAAGTTTCTTTAAGTCTTTAATAATGACGTCCATACTGCTATGCCTCTGGCATAGAAGTAAAAAGAAGGGCAGCATGCACAAAGCATCCTGCATCTGGGGAAGGGTCGCACTCTAAGGGGGTCTAATGTAGTAAGCCTACCTTGACGTATAAATGATGTGGGAGTTATCCACGGGAAATGGAATTGGACCGTTAGAAATGCCATCATTTCTGAGTAATATGCTTCCTTTTCCTGATATAATCTCCTTAAGTGGGTGATTGTACCATGCTCCAAATATATGCCCTCTCCTTTTCTGGAGGCCCACTCAGTTCAAACTTATTTTGGTTATGGAAATCCAGAATTAAATATTGTGGTATTTCCTCATGCGAGGACTATGTTATTATATGCTGACATTCTATTCAGGGGAACTCTTCTTCCTCTGTAGTTTTGTGCTTCTCTTATGAAAGGAGACTCTTTTATTACCTGCATTGTGCTTGGCTGGACATGAACTAGGAAGGTCCAGTCTAGTTTAATAGATTAAGTTCTTCCATCATTCAATGACACCTGAACCTTGTACTCAAGTGGGAAGCTACTTTTATTAGAACCCCCACAAACAGTTGTTTTTGACCTTGTTTCAATCATCTACTGGTCTTGTAAAAAAGTTGCTCGTCTGGGGAAGCATGTGACTGATAAGCCTGATTTTTGAGAAAAAAAATTCCAATCCCTGTAGGTCACACAACATGTTTACCTTTGTGTGTGTGTGTGTTTGTGTGTCTCCCTCCAACTATCTTTTATTGAACCAGTTGTATTTTTGCATTCTGTCGTGTGATCGTCTGAAATATGATCACAAGGCAGGATAACTGATAAAAAAAAAATATGATCATGAAACCGACTTCATCAAATTTAAAGCTTGTACAGCATATTTTTGATGTTTCTTAACTATCTAAAGTTGAGTGGTGATCAGGAAAAGAAAATGGAAGTCCTGGAAGGTAAATTCAGTTTTATCTTATTTTGTTTACTGTGTGCAGCCTCTCCATGTTGGTTTCACTGGAGATCTTGGTGGAAACAGTATAATTGTTCGTTGGTACAGGAGGAAGACTAATTTGCACCATGTAGGTTGTGCGTTTCTTTGAGTTCCAATTCATTCTGATCTCATTCTTTTGGATCACTAAACAAAATTGTTGAAGTGTAACATCTTCGAGCAGACTTATTCACTTCATGTTACCATTAACTATACCAAGTGTCTATAATATATAGTCCTTTTCATTTGAAATATATTTAGATAATACCTTCTTTCTAACTCTCAAATTACGTATTCAATTTTCTCTACTTTGAAAACAAATGGAAAGTTCTGAGCATGTTTACCTCTAATCTTTCACCTGTCAAGAATACTTGAGAAGTAGTATATACTATATACATCTTAAACTGTATGCGTACAGGTGAAGGGTGTAAATTATTTAATGTGAGGCACACACAAATCAGATATCTATTAGAACCAGCCACTGTAACTTCTTGACTTAAAATTTTCAGGTATGGGATAACATGATTATTGAATCTGCGTTGAAGACATACTACAAATCTGATATAATGTTAATGACACAAGTTCTTCTGAAAAACATCACTGTAAGTTTTAGTTGTTTTCTTCATTCACAGTATTACATATCCATTTCTTAGAGATCTGAACTTTACAATTCTTCAAGTGATGTTGGAAAATTGTTAAATGATGCATGAATATTGTGGGAGGATTTCATCATCCCATTGCCACAGTGCTCATTGGAAAGAATCTCACTGTCTTGTGTTCTCTTAAAGAAAATATTACTATGGTCGTAGCATAAATAGCAGTTAAAATCTGCCTCACATGGATTCCACTTTCCGATCCAGCAAGATGTAACAAATTGTTTTTCCTAGCTTATGCAGAAAATCTTTCTTCAATTATATGTGACATTGCAAGTTTCTTTTTGTTTTGGATGCATAAATAGCACCAACTCCTGAACTTGTTAAGCTTTAAAACCATTCAGTTTTAGTATGTCTATTTCACTAGCTTCTCAAGACTCGTGTGCATCCTGTCATTTCTTCTATTCTCTGTATTCCCATAATCACTTGTAACTAATGTACTTGTATCTGGATACAGCATGAATGGTCCGATGATGTTCCATCTTGGGAAGATTGCAAGGAGATGGTTTGTCCTGACCCGTAAGTGTATATATTCATACATACATAAAAAGAATGCACTATTTTGAGGAATTCGTTTTTACAGATATGCTTCTGAAAGTATCCGTTTGGCCTGCAAATTTGCCTACAGAAATGCAACCCCGGGAAGCACTTTAACAGGTAAAAACCCTCACGTCCCTTATCCCTCTGAACAAATTTATACATCCAATATTCTATATATATACTCAAGCAAGAGAAACTGATAAGCAAAAGAGAAAGAAATTGAGAGGAAGAAACATGATTGGGAAAATTTAAAAAAAAAAAAGAGAGTTAGAAAGCAGAGTGCAAATCTGAGGGTTTAGGAAAAGAGTGTTCCGAGAATTGAGTAGAGTCGGAGGTTTTGTTTGCAGTTTCGAGTTCGTGTACCTGATTTGGAAATCTATAGATTGTACATTACGTTCCTTTGTTAATAGAAAGCAATTTGAAGGTTAGTTATCACCCTTACCTATTTTTTCGTAGAGTTAGGTAAGATATGTGTATAATGAGTTTCTCAAAGTAAAAAGTAACCAAAAAAAAAAAAGAGAGAGAAAGGAAGAGAGATAATTAAAAATTTATTTTACCATGTGTTTGTATTGTTTATGGGTGAATATTTTTTGTTATGGTTTCTATTTTTAGAGTTAAATTATAAAAAATTTAAGATGTACTTTTTCATCATATTAATATGCAAAAAGTTGTAATTTATAGTACTTTTCATATAGTTTTAAAATATCTAATTTTTTTGTTTAAAATATCGAATTAATGTGATCTAATTTAACTTTAAAGATTAGTCAAACTTTTGAAAAAGTGCAATATGAAAAACAATTTCGAATCAAGGGAATATTAATTATTGAAGTATGCTAAGAAATGAAGTTTTAAGCATAAAGAATGTTTCTAAACTTTAAAGTAACGTGAAAAACTAGTTTTTTTGTTTGTTTTGATTTCCAATCCATTCGGTCATTGCCCGAGCATATTCAATTGAGGCTATTGTTGTTTTTATAGTGTATAAATTTCTTAGAATTTGAATTTTGTACGGTATACAAAATATAAGTAATTTTACAAGTAAAATACAGTAACTTTCTTAAGTAATATTATTTACCTTTTTAAAACAAAACAAGTTACTACTAAAGAGTTGGTATTGGATAAAACATTTTCTTTTGTTTTACTGTAAAAAAAAATAAAAATCAAACTTTGCTCACCACTTTGATCTTTCATCAGAGCTATCATGATCATAGCTAAAATAGGTTTTTTACTCTTTAATAAAATAAGACAAATTTTAATGTGAATTTTAAAATAAATCAAAGAAATGGGACACAAGTAATTTCTAGGTTCATATGTATAATATATTTAAATATTAAGTCAAGTAATATATAAGTCAATAAAGCGATTTTATTAAAACTACGGGATTCCAATGATGTTTGATATTTTCTTCTCGGTCAATAGAATTTCTATCCAAAATTTTATTTCATAGACCAATAGAAGATAGAGTTAATTTTCTTTTTTCTTAACGATTTAAATTAAGTTACTTGAAATACCGAAAGTTAATTCTAAGTGGTGACTCTGAAATAAAATAATCCATTTTCAAAATAGTTATTTTAATTGGATATTTTTTCAAAATTTCATCGTTCTTTTAAGGGGTAAAAATCATCATGAAGAAGAGCCCATGATACCAAAACATGTTAATGATATAAGTTTTTTGAATTGTTACACATCAATCAAAACGAAATAGGTGGTGGTTGCCTTGATAATTATGAGTTCATTTAGAATTTTTATACATAAGATATGACTGAAAAGATGGGTTCGATTTATATGAAACGAGACTCTGTAATTATGATGTCTTTATAATATCTCTTTTAGGAATTATGATATTTCCAAAAAGAGAAGGAAAAATTAAAATAAATTTAGCTGCCGTCATTACAAATTTTGGGAAGAAGCCTTACATCACCCTTGAACAGATAGTTCTAGCATACATTTACCGTGCAGGAATGCTATATTTTATTGCAAATATGGATGATTGAGCACATTTGTTATTACCCTGTTATACTGAACTTCAAAGTAGATTGTAATGATTACATTGAGGGCCACAAGGAAAAAATAAAGATTAGATTTTTCCAAAGGACATTGAAAGCGGAAGATACTTCAATGTTGTAGCCACTGATAAGATTGTGTGAAATTATCATTGGTTCCCACCAGATGAGTTGATATACATGGGTCTTTGAGGTGTCCAGCCTTACATGCCGCTCAATAGTCATGTGGCAATTAGATCGATGTTGATTTTACGCTCAGCTTGATAAATACTGAAATGTTTTGCTCTTTCCTGTTTCATAAAAGCTTTTACTTGATTCTGAAGCCTAGATATGAGTGGGGTCTTTACTTTTTTAAACTTTTCCTGTTGTTGCGTCATAATACACAAGTCCTCTTGTAAGGTCAGAATGGTAGAAGATGTTCCTTCTCAACCCTTTTATCGAACCAACCTTACTCTAGATTCGAATGTTGGGTCAACTCTTCTTTAGGTCATTAGTTGAGACATCCAGAGTGAGTAGATCTATAATTTTCTTCAACCTCAAGTGGAGTTTGCTTGATTCTAACTTTTGTTTCTCGATCTATGGGTCCCTTCGCTGATCATTCTGACATAACCTTAGGGGGTGGTTGATCACGAAACCATCCTAAATATGAGTTGCCCGCCTCATCTTTGTCACGATCCTCCACCTTATCATGGGAACTTGAGAATATACTTTCTCCCAAAATCTTAAATATTTCTTATTCCCATTGAAGAGATCTTGAAACGAAACTCATACATGAATTCTTGCATATCTTCATTAAGAGGTAAAGCTGGTGCTGATCAAATTGCCGCATGACTCTGAGTGACATGTAAGACTGGACACCTCGAAGACCCCTTAGGACGATGAATGATAGACATGTATATCCCCTAGTTTGATAGGAACTAATGACAGTTCATCTTGTCAAAGCATTGAGGTATTTCTTTCAAGCTTCAATGTCCTTTGAAAAACTTTGATTTTTAATTCTTTTCTTGTGGCCCCAATGTAATCATTTCATTCTACTTTGAAGTTCACTACTTAAGGGTAATAACGAATGTGCTTATTCATCCACATTTGCAATAAGACATTGTATCCCTCAAAATAATCTTCTCCAGCCTTGTACCTTGTCAGAGTAGGTAAATGTTTGCTAGAACCTAGGTACGAGGGTGATGTTAGACTAACTGTCAAAAGTTGTAATGATTGTAGTCAAAATTATGTTGAACTTTCTTCCCCTTTTTTTGAAACACTATAATCCCAAAAAAGCTACTACAAAGACATCGTAACTGTGTGTTTTCCAGGTCAGGTGACACCCATCGTTGTGAAGTTTCGTTCCATATAAACCGAACTCATATTTTCAGCCATTTCTTTTGTATAAAAAGTCTAAAAGAACCCATATATTATTAAGGCAACCACCTATTTTGTTTTCATCGATGTACAACAACTCTAAAAACCTTTTACCATTAACATGATTTGGTATCATGGCTCTCTTTGTGAAGATTTTTACTCATTCCCATTAATAATGCGCCTATCTCTTTGAGAGTGGGGGTAAGTTGAAAGTTTGAAAAATGGAATGCATTATTTAACGAGTCCCAAAAATGTACTAGTTCTTCTATCAAATTCCTTTGTGGCTCAACAACAAGGCTTCATAAGAATCTCAAGCGTTTGAACACTATGCCTTTTTATAATTCGTCATATTTTCATATCATGTCCTTAAAAGTGTCGGGGCCTAATCCAAGGTCATTGATCATTCGTTAACCTCTTGTCTCCCTTTTCATATTAGCTCATATTTTCCTATAGGATGATGATACATTAGGACTTAACTATGTTTTAATTAAAATGGCTTTTTTTTTTGAAATAATAATTAAACAAAATAATAATCTTAGACTCGAGACAATCAAATTTTTTGAATAAGGATTTGATAGCGAACTTATTTTATAAAAAAAAAATGGACTTTATAGTACTCACAGTGTTTTCCTCCTATCATCCAATCATTTTTCCAAAATAATTTGAACTAATCTATAAAGTTGTGTCATTCTTGATTTCGTAATGTCTTTTTATCCCTTTTCTAATTAACTCTAAATCAATTAATATATAAAGTGTTAAAAAATCAGATTAAGAAAACGGATAGTAATAAAATTACTATCTTATTTTATTAAAATAAAAATATATTGTAATTAATTTCTTTTCATTTCTTTTTTCCTTTGAAAAAATTAATAAAACTTATACTTCAATGGGACTCTTTTCCTATAATTAATTTAGTTTTCATTATTGTAAACATGATCTTTAGATGGATCCATTTTCTTAACATTTCTTCCCTACAAATCAACAATCACCTATAAAATATACATGGAAAGCCAAGCTATGTACAGCTATGTTCTGTGTATATCAATAATTAGCTAACATTGAGAGAAGCCTCCATGTGCATCACAAAATATTACACAATATTGTATTCAATATATTTTCGGAAACAATTTCTCTACCTTCACGAGGTAATGGTAAAGTCTGTGTACACTTTTGCGGGATTTCAGCGGATATTTATTGTATTCAATGTATTTCTAATCTTCCATTATCTGTTTGTTTTCCAGACGATTACTTCCTCTCTCGTCTTCCTGTTGTGGAGAAGAGGTTGGCACAAGGTGGGGTCCGCTTGGCCGAAGTTCTCAACAGAATTTTCACTAAAAAACCATCAGATGCTGCACAATGAAGATAAACTGCAGAAGAAAACCACTCTATGTATTCAATTATCCATTATAACTTGGAAGTTTCCCTCACGCCAAGAACTGAAACCTACTTAAGTGACTTATAAGTCAACTATTGTATTAAAATGGGTGTAATAAAATGTTACTTTAGATGCACAACTAGTCCATTATTACATGATAGATGCTACTATCATATTGGAATATGCTGTATGTTGCTTTTATGGATAATCAACCTCTATTTTACTTTTTAAGATAAGAGGAATCTTCAGCTTGTACACAACAAGAACCATTTCAACAGTTTTTGTATATATAGAACAAGTCCAAGTTTGGTGGGACACTTCCGGTTTTCGATATCTGTCAAGTTGTAGAACTTCTTTTGAGAATGTTGAGGTTAACTTCATTAAGCAGTATTTTCTTTCTCTGTGTTGCTTTTATCAACCAACATGGTGTTGAAGCATGGAGCAAAGAGGGGCATGTGATGACTTGTCGAATCGCGCAGGTATATATTTATTTGAAAAATGTTTTTTTTTTTTTTGGCTTCAAATTATAAGAACTATTGCATGTGGAAACAGGGCTTGTTGAATGATGAGGCAGCTCATGCAGTCAAGATGTTGTTGCCGGAATATGTTAACGGTGACTTATCGGCCCTCTGTGTGTGGCCAGACCAAGTCAGGCACTGGTATAAGTATAAATGGACAAGCCCTCTACACTTCATTGATACACCAGATAAAGCTTGCAACTTTGATTATGAAAGTAAGTCAAATGCATCCAAAAAACGCGATGTATTTATTCTCTCTTTTCACAATTTGATCCTATAATTCATAATGTTTCTTTTTTTGTATGATGAGAAGGGGACTGTCATGATCAACATGGAGTAAAGGATATGTGTGTTGCTGGTGCAATTCAGAACTTTACTACTCAACTCTCTCATTACAGAGAGGGAACTTCTGATCGTCGATGTAAGGATCAAAAATGGTAAATTTCTTATATTGTATGGGGTGACTATCTTATGACACTATATAATTTGTCAATAATTACAGATAATATGACAGAGGCTTTGCTGTTTTTGTCACATTTCATGGGAGATATCCATCAAGTATGTACTCACTCTTTTTTTTTCACATTTGAAACGTTAAACAAATAGCAACCAATGTATGATTATTAGAAAAACTTGTTACCTTGTTGTTTTTGTGATTTCAGCCTATGCATGTTGGATTTACAAGTGATGCTGGAGGAAATTCTATTGATTTGCGCTGGTTTAGGCATAAATCAAACTTGCACCATGTAAGTATATAACTTATCGAGTTTGATCCAAGATTTAAAGTTAATGCGTTCAAATTTGGCTATGATAGTAAGAAAAAAGATGATTAACGACGTATGTTTTCCTTTGTAAAAAATAATGTTATAGGTGTGGGATAGGGAGATAATACTAACAGCTGCAAAAGACTACTATGCGAAGGATATAAACCTCCTTGAAGAAGACATTGAAGGGAACTTCACTGACGTAAGAGTCAATCTCTTAAACTTGTCAGAACATTTCATTTAGACATTCGAACCAAGTCATAAACTGTTCCAACTAGACATTTTCGGTTCAAATTTTGATTTTGTTAAATCTTATACATACTCAGGGAATTTGGTCTGATGATCTTGCTTCTTGGAGAGAATGTGGCAATGTCTTTTCTTGCGTAAACAAGTGAGTTCTTTCTCTATGTAAATCGGAAGTTGATTTTGAAACGACTAAACGTACGAAAACATATATACTTTGACTATGACTTCAATAGCGATTTTACACTTGGAGAAATTGATTAATTGTTGATGTGATGTTTTTAGGTTTGCAACGGAAAGTATAAATATAGCATGCAAATGGGGATACAAAGGTGTTGAAGCCGGTGAAACTTTATCAGGTATTTTTTACTTGACTGTCTACGATTTTATTACGTATGTTTGGGATACAAACTAATATTTGAGAAAATAAATTATTAATTGACATTTAATCTATTTTAATTTGTGTAGATGATTACTTCAATTCAAGACTTCCAATAGTAATGAAACGAGTAGCACAAGGTGGAATAAGATTAGCGATGCTTTTAAACAACGTTTTTGGAGCTTCTCAACAAGAAGATTCAGTTGTTGCAACTTAATTACCAAATAATTTTAATAAAATAGTAATGAAAAACCATATATTACTTCATGTTTGACCAAAATAAAATAAAAACACTAAATTAGATGACACATCTTTGTTGTATTTAAATTCGTGTAAATTGTAATTACCCACAGAGATGTATTT</genome_strand>
        <mrna_strand>TGACTCTTCAGTTCAGTACCATTTCTAGGGTTTATTCCACCTCAAAAATTATTGTCATTCTTGGATCTTGAACCACCAAAACAACCCCTAGCTACTG........................................................................................GTTGAGTAATTTGATTGGAAAAGATGGGTGGGTTTGAGCTCAAATGGTTTGTAGGAGTAGCTGTTGTTCTGATGATGGTTCAAAATATTCTTGGTTGGGGGAAAGAGGGACACTATATTATCTGCAAAATTGCTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATATCTAACAGAAGATGCTTTAGCTGCAGTCAAAGCATTACTCCCAGATCAAGCCGAAGGTGATCTTGCAGCTGTCTGCTCCTGGCCTGATGAGGTTCGGCGCCACTACCACTACCGCTGGAGCTCTCCATTACATTATGTAGATACACCTGATTTCTTGTGCAATTACAAATATTGCC........................................................................................................................................................................................................................................................................................................GAGACTGCCATGACGGGCATGGGCTCAAGGACAGGTGTGTTACGGGAGCAATATACAACTACTCAATGCAACTTTCGCAGGGATATTATGATTTGAATTCAGAAAAAT.....................................................................ACAACTTGACTGAAGCACTTATGTTCTTGTCTCATTTTGTTGGTGACGTACATCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCTCCATGTTGGTTTCACTGGAGATCTTGGTGGAAACAGTATAATTGTTCGTTGGTACAGGAGGAAGACTAATTTGCACCAT..................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGGGATAACATGATTATTGAATCTGCGTTGAAGACATACTACAAATCTGATATAATGTTAATGACACAAGTTCTTCTGAAAAACATCACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAATGGTCCGATGATGTTCCATCTTGGGAAGATTGCAAGGAGATGGTTTGTCCTGACCC................................................................ATATGCTTCTGAAAGTATCCGTTTGGCCTGCAAATTTGCCTACAGAAATGCAACCCCGGGAAGCACTTTAACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATTACTTCCTCTCTCGTCTTCCTGTTGTGGAGAAGAGGTTGGCACAAGGTGGGGTCCGCTTGGCCGAAGTTCTCAACAGAATTTTCACTAAAAAACCATCAGATGCTGCACAATGAAGATAAACTGCAGAAGAAAACCACTCTATGTATTCAATTATCCATTATAACTTGGAAGTTTCCCTCACGCCAAGAACTGAAACCTACTTAAGTGACTTATAAGTCAACTATTGTATTAAAATGGGTGTAATAAAATGTTACTTTAGATGCACAACTAGTCCATTATTACATGATAGATGCTACTATCATATTGGAATATGCTGTATGTTGCTTTTATGGATAATCAACCTCTATTTTACTTTTTAAGATAAGAGGAATCTTCAGCTTGTACACAACAAGAACCATTTCAACAGTTTTTGTATATATAGAACAAGTCCAAGTTTGGTGGGACACTTCCGGTTTTCGATATCTGTCAAGTTGTAGAACTTCTTTTGAGAATGTTGAGGTTAACTTCATTAAGCAGTATTTTCTTTCTCTGTGTTGCTTTTATCAACCAACATGGTGTTGAAGCATGGAGCAAAGAGGGGCATGTGATGACTTGTCGAATCGCGCAG.........................................................................GGCTTGTTGAATGATGAGGCAGCTCATGCAGTCAAGATGTTGTTGCCGGAATATGTTAACGGTGACTTATCGGCCCTCTGTGTGTGGCCAGACCAAGTCAGGCACTGGTATAAGTATAAATGGACAAGCCCTCTACACTTCATTGATACACCAGATAAAGCTTGCAACTTTGATTATGAAA..................................................................................................GGGACTGTCATGATCAACATGGAGTAAAGGATATGTGTGTTGCTGGTGCAATTCAGAACTTTACTACTCAACTCTCTCATTACAGAGAGGGAACTTCTGATCGTCGAT.................................................................................ATAATATGACAGAGGCTTTGCTGTTTTTGTCACATTTCATGGGAGATATCCATCAA........................................................................................................CCTATGCATGTTGGATTTACAAGTGATGCTGGAGGAAATTCTATTGATTTGCGCTGGTTTAGGCATAAATCAAACTTGCACCAT............................................................................................................................GTGTGGGATAGGGAGATAATACTAACAGCTGCAAAAGACTACTATGCGAAGGATATAAACCTCCTTGAAGAAGACATTGAAGGGAACTTCACTGAC............................................................................................................................GGAATTTGGTCTGATGATCTTGCTTCTTGGAGAGAATGTGGCAATGTCTTTTCTTGCGTAAACAA.........................................................................................................................................GTTTGCAACGGAAAGTATAAATATAGCATGCAAATGGGGATACAAAGGTGTTGAAGCCGGTGAAACTTTATCAG.............................................................................................................ATGATTACTTCAATTCAAGACTTCCAATAGTAATGAAACGAGTAGCACAAGGTGGAATAAGATTAGCGATGCTTTTAAACAACGTTTTTGGAGCTTCTCAACAAGAAGATTCAGTTGTTGCAACTTAATTACCAAATAATTTTAATAAAATAGTAATGAAAAACCATATATTACTTCATGTTTGACCAAAATAAAATAAAAACACTAAATTAGATGACACATCTTTGTTGTATTTAAATTCGTGTAAATTGTAATTACCCACAGAGATGTATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U592751" ref_strand="+" ref_description="SGN-U592751 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|76160992|gb|ABA40459.1| (e_value=5e-90) NADPH quinone oxidoreductase-like protein [Solanum tuberosum]; (*ATH) AT4G21580.3 (e_value=6e-73) |; (*SWP) sp|Q53FA7|QORX_HUMAN (e_value=3e-35) Putative quinone oxidoreductase OS=Homo sapiens GN=TP53I3; ">
      <seq>ggggaactagacaaaaagtagagcgttcaagaacaagaatggaaacaaaatacaagaaagtcgtgtaaacctctccaactctctttccaaaaccttgttaactcagtgagtaaaattgattgtgattaaggatgaaggctgttgtaatcacaagccctggtggtccagaagtgttgaagcttcaagaagtggaagacccacaaattaaagatgatgaaatcttgattaagatagcagctactgcccttaatagagctgatacccttcaacgccaaggtaaatacccaccccctaaaggcgacagtgaatacccaggtcttgaatgttctggaactgttgaagcagtcggcaaggaagttactcgctggaaaattggtgatcaggtatgtgctctcattggtggaggtggttatgcggagaaagtagctgtacctactggacaagttcttcctattccatcaggtgtgtctttacaagatgcggctagttttcctgaagtggtgtgcactgtttggtcgaccattttcatgacnagcaagctttcctctggtgaaacgtttctgatacatggaggctctagtgnaattggtacgtttgccattcaaatggctaagtgccttggantcaaagttttcatcacagcnnnagtgangaaaaactttcnncatgnaaanaactcggggctgangtttgcatcaattacaanactgnanactttgttacncgcntcnaggnanaancngga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="+" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="108951" stop="111717"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109249" g_stop="109631" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="383" r_length="383" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="109632" i_stop="110775" i_length="1144">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110776" g_stop="110955" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="563" r_length="180" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110956" i_stop="111162" i_length="207">
            <donor d_prob="0.904" d_score="0.98"/>
            <acceptor a_prob="0.943" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="111163" g_stop="111244" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="564" r_stop="644" r_length="81" r_score="0.951"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="111245" i_stop="111316" i_length="72">
            <donor d_prob="0.972" d_score="0.94"/>
            <acceptor a_prob="0.911" a_score="0.84"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="111317" g_stop="111417" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="645" r_stop="745" r_length="101" r_score="0.822"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="+" ref_id="SGN-U592751" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>746</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U592751" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109249" e_stop="109631"/>
          <exon e_start="110776" e_stop="110955"/>
          <exon e_start="111163" e_stop="111244"/>
          <exon e_start="111317" e_stop="111417"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGCAACTAGACAAAAAGTAGAGCGTTCAAGAACAAGAATGGAAACAAAATACAAGAAAGTCGTGTAAACCTCTCCAACTCTCTTTCCAAAACCTTGTTAACTCAGTGAGTAAAATTGATTGTGATTAAGGATGAAGGCTGTTGTAATCACAAGCCCTGGTGGTCCAGAAGTGTTGAAGCTTCAAGAAGTGGAAGACCCACAAATTAAAGATGATGAAATCTTGATTAAGATAGCAGCTACTGCCCTTAATAGAGCTGATACCCTTCAACGCCAAGGTAAATACCCACCCCCTAAAGGCGACAGTGAATACCCAGGTCTTGAATGTTCTGGAACTGTTGAAGCAGTCGGCAAGGAAGTTACTCGCTGGAAAATTGGTGATCAGGTTTGTCTGATTACAGTTTCCATTTTTTTAAAAAAAGATGTCAACTTTATAATTGAAATTGAGGCTTAATTGTTGATTGTTGTTTATTCTCTTCATGTTGGGTAATATGACAGTGAGGAAGTTATCTGAAAATGCACAAATCGTTGAATTTATGGGACTAGGCTAAGAACAGACAGGGAACAAAGGAATAAGATATCTGAAAATGTCTAATCTTTGGAATCTTACTAGCTCCATTTCAATTTATTTTGTGTGTGTGTTTTTTCACTTGGCATCAAGTTTAAGAAAGTAAAGAGATACTTTTAATTTTAATTTTGAGGTTTTAAACTAAAATAGGTAGAGTGAACTAAAGTGTCTTTGGAAAAAAAAAAACCAAAGTGTCGTTTAATCTTGTTGTCTTAAACAAGCCTTCTAAAAAGTTAGAACTAAGAGTTGCCAAAAGGGAAAAAAGACATTCTTTTTGAAACGGACTAAAAATGTAATTAAGATAAACAAATTGAAACAGATGGAGTGTTTTTGTTGGAGTTTTCTATGTCAGGCCTAGGAATAGGTAGGAATCAGAGAACCATTAACGAGTAATGGAATAAAATGAGCCCCAATAGAGAAGAACGGATAAAGGATTCATATGGCTTGACTCCACCTGGTTTGAGTTTTTGGGGTAGTTAACTCGTTATGTTGTTGTGTATGGAGTAAGATATTTCCATTTCATTTTGTGGTGCTTCGTTTGACATAAATTTGGTAGAATTTAATAGTGGTGGAAGTGGTGATAATTAAGTACAAGGAGGGGAACAATGTCTATATCTTGATAAGTAAAGATTAAGGGCTTTGGAGTCGGAGTAGAGTGCAAGATGACCTCTGCACATCAGGGACAAAAGGCTTCTTGTTTCAAGATGAAAGAATTTCCTTGAGTAGTAACCTGAATGATTCTGGATAGCCCTTGTTAGTTAGGGTAGCAGTTATCCATTAACTTCCTGAAGTGAAACTAGTACTGTTTTAAGTTCCTGTAAAGCCTTAGCAGGAGACAACAGTGATGTTTTTCTGATCTTTATGTTCTTTTTCTTTGTTGGTTGGGAGTTCACATTTCTATGTATTGTTTGAAAGGGAGTTTTGTTTAGTGCATTGATGATGTAAAAGCTTCACATAATAGGTATGTGCTCTCATTGGTGGAGGTGGTTATGCGGAGAAAGTAGCTGTACCTACTGGACAAGTTCTTCCTATTCCATCAGGTGTGTCTTTACAAGATGCGGCTAGCTTTCCTGAAGTGGTGTGCACTGTTTGGTCGACCATTTTCATGACGAGCAAGCTTTCCTCTGGTGAAACGTTTCTGGTGATTAGACAGACCATAGCTATTCTTTAAAACAATTTGTTGTTTAGCAGTAGTTCCTTTTCTTTTATCTGTGCAGATTATCAGCCATTTAGTCAATTGGCAGAATCTTTTGGGTAGTATGTTCACAATTGAATCTTTATATCCCTGATTCCGGTCGACTAAGATCAAGTACGTGAAATAACTAATAGCTACATGTGTTACTTTCAGATACATGGAGGCTCTAGTGGAATTGGTACGTTTGCCATTCAAATGGCTAAGTGCCTTGGAGTCAAAGTTTTCATCACAGCAGGTTCATGATGATTTCTTATCTTATTATGGAACTGAAATCATTCAGCTAACCATGTCAAATCTTGTTAACCAGGAAGTGAGGAAAAACTTTCCGCATGCAAAGAACTCGGGGCTGATGTTTGCATCAATTACAAGACTGAAGACTTTGTTACACGCATCAAGGAAGAAACAGGA</genome_strand>
        <mrna_strand>GGGGAACTAGACAAAAAGTAGAGCGTTCAAGAACAAGAATGGAAACAAAATACAAGAAAGTCGTGTAAACCTCTCCAACTCTCTTTCCAAAACCTTGTTAACTCAGTGAGTAAAATTGATTGTGATTAAGGATGAAGGCTGTTGTAATCACAAGCCCTGGTGGTCCAGAAGTGTTGAAGCTTCAAGAAGTGGAAGACCCACAAATTAAAGATGATGAAATCTTGATTAAGATAGCAGCTACTGCCCTTAATAGAGCTGATACCCTTCAACGCCAAGGTAAATACCCACCCCCTAAAGGCGACAGTGAATACCCAGGTCTTGAATGTTCTGGAACTGTTGAAGCAGTCGGCAAGGAAGTTACTCGCTGGAAAATTGGTGATCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGTGCTCTCATTGGTGGAGGTGGTTATGCGGAGAAAGTAGCTGTACCTACTGGACAAGTTCTTCCTATTCCATCAGGTGTGTCTTTACAAGATGCGGCTAGTTTTCCTGAAGTGGTGTGCACTGTTTGGTCGACCATTTTCATGACNAGCAAGCTTTCCTCTGGTGAAACGTTTCTG...............................................................................................................................................................................................................ATACATGGAGGCTCTAGTGNAATTGGTACGTTTGCCATTCAAATGGCTAAGTGCCTTGGANTCAAAGTTTTCATCACAGC-N........................................................................NNAGTGANGAAAAACTTTCNNCATGNAAANAACTCGGGGCTGANGTTTGCATCAATTACAANACTGNANACTTTGTTACNCGCNTCNAGGNANAANCNGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U579777" ref_strand="+" ref_description="SGN-U579777 Tomato 200607#2 [34 ESTs aligned] (*GB) gi|76160992|gb|ABA40459.1| (e_value=1e-171) NADPH quinone oxidoreductase-like protein [Solanum tuberosum]; (*ATH) AT4G21580.1 (e_value=8e-140) | Symbol: None | oxidoreductase, zinc-binding dehydrogenase family protein, Pig3 Homo sapiens, PID:G2754812; contains Pfam zinc-binding dehydrogenase domain PF00107 | chr4:11475731-11477780 FORWARD | Aliases: F17L22.40; (*SWP) sp|Q53FA7|QORX_HUMAN (e_value=1e-64) Putative quinone oxidoreductase OS=Homo sapiens GN=TP53I3; ">
      <seq>taganaaaagtagagcgttcaagaacaagaatggaaacaaaatacaagaaagtcgtgtaaacctctccaactctctttccaaaaccttgttaactcagtgagtaaaattgattgtgattaaggatgaaggctgttgtaatcacaagccctggtggtccagaagtgttgaagcttcaagaagtggaagacccacaaattaaagatgatgaaatcttgattaagatagcagctactgcccttaatagagctgatacccttcaacgccaaggtaaatacccaccccctaaaggcgacagtgaatacccaggtcttgaatgttctggaactgttgaagcagtcggcaaggaagttactcgctggaaaattggtgatcaggtatgtgctctcattggtggaggtggttatgcggagaaagtagctgtacctactggacaagttcttcctattccatcaggtgtgtctttacaagatgcggctagctttcctgaagtggtgtgcactgtttggtcgaccattttcatgacgagcaagctttcctctggtgaaacgtttctgatacatggaggctctagtggaattggtacgtttgccattcaaatggctaagtgccttggagtcaaagttttcatcacagcaggaagtgaggaaaaactttccgcatgcaaagaactcggggctgatgtttgcatcaattacaagactgaagactttgttacacgcatcaaggaagaaacaggagggaaaggtgttgatgtcatactagataatataggaggttcatacttccaacggaaccttgacagcctcaatgttgatggtaggctcttcattattggttttatgggaggaacagtgacacaagtaaatcttggctgtttgttagcaagacgccttacagtgcaggctgctggcttgcgtagtagaagcccaaaaaacaaagctcaaattgtgagagaagtggaaaaaaatgtttggcctgcaattgcagcagggaaggtgaaaccggtggtgtacaagtacttccccttagcagaagctgctgaggctcaccagttaatggaaagcagcaaccacattggaaagattctgctcactgtttgaatgttgtaaaagagagattttcttgttcttagtgttaaaatagcctgtacttacagccagtccctccccccccccccccctccaaacatctgctgcatgtacactttgcaatgtttccaataaagcaaaaccttttttatgatttctcactttccatcttctgagtgctttaagttttcgacgatttttcgatgtatatgtttgaaattgaaagtattttttagaaacaaatttgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="+" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="108959" stop="113978"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109256" g_stop="109631" g_length="376"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="375" r_length="375" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="109632" i_stop="110775" i_length="1144">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110776" g_stop="110955" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="555" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110956" i_stop="111162" i_length="207">
            <donor d_prob="0.904" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="111163" g_stop="111244" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="556" r_stop="637" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="111245" i_stop="111316" i_length="72">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.911" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="111317" g_stop="111424" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="638" r_stop="745" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="111425" i_stop="111672" i_length="248">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="111673" g_stop="111831" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="746" r_stop="904" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="111832" i_stop="113245" i_length="1414">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="113246" g_stop="113678" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="905" r_stop="1338" r_length="434" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="+" ref_id="SGN-U579777" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1338</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U579777" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109256" e_stop="109631"/>
          <exon e_start="110776" e_stop="110955"/>
          <exon e_start="111163" e_stop="111244"/>
          <exon e_start="111317" e_stop="111424"/>
          <exon e_start="111673" e_stop="111831"/>
          <exon e_start="113246" e_stop="113678"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGACAAAAAGTAGAGCGTTCAAGAACAAGAATGGAAACAAAATACAAGAAAGTCGTGTAAACCTCTCCAACTCTCTTTCCAAAACCTTGTTAACTCAGTGAGTAAAATTGATTGTGATTAAGGATGAAGGCTGTTGTAATCACAAGCCCTGGTGGTCCAGAAGTGTTGAAGCTTCAAGAAGTGGAAGACCCACAAATTAAAGATGATGAAATCTTGATTAAGATAGCAGCTACTGCCCTTAATAGAGCTGATACCCTTCAACGCCAAGGTAAATACCCACCCCCTAAAGGCGACAGTGAATACCCAGGTCTTGAATGTTCTGGAACTGTTGAAGCAGTCGGCAAGGAAGTTACTCGCTGGAAAATTGGTGATCAGGTTTGTCTGATTACAGTTTCCATTTTTTTAAAAAAAGATGTCAACTTTATAATTGAAATTGAGGCTTAATTGTTGATTGTTGTTTATTCTCTTCATGTTGGGTAATATGACAGTGAGGAAGTTATCTGAAAATGCACAAATCGTTGAATTTATGGGACTAGGCTAAGAACAGACAGGGAACAAAGGAATAAGATATCTGAAAATGTCTAATCTTTGGAATCTTACTAGCTCCATTTCAATTTATTTTGTGTGTGTGTTTTTTCACTTGGCATCAAGTTTAAGAAAGTAAAGAGATACTTTTAATTTTAATTTTGAGGTTTTAAACTAAAATAGGTAGAGTGAACTAAAGTGTCTTTGGAAAAAAAAAAACCAAAGTGTCGTTTAATCTTGTTGTCTTAAACAAGCCTTCTAAAAAGTTAGAACTAAGAGTTGCCAAAAGGGAAAAAAGACATTCTTTTTGAAACGGACTAAAAATGTAATTAAGATAAACAAATTGAAACAGATGGAGTGTTTTTGTTGGAGTTTTCTATGTCAGGCCTAGGAATAGGTAGGAATCAGAGAACCATTAACGAGTAATGGAATAAAATGAGCCCCAATAGAGAAGAACGGATAAAGGATTCATATGGCTTGACTCCACCTGGTTTGAGTTTTTGGGGTAGTTAACTCGTTATGTTGTTGTGTATGGAGTAAGATATTTCCATTTCATTTTGTGGTGCTTCGTTTGACATAAATTTGGTAGAATTTAATAGTGGTGGAAGTGGTGATAATTAAGTACAAGGAGGGGAACAATGTCTATATCTTGATAAGTAAAGATTAAGGGCTTTGGAGTCGGAGTAGAGTGCAAGATGACCTCTGCACATCAGGGACAAAAGGCTTCTTGTTTCAAGATGAAAGAATTTCCTTGAGTAGTAACCTGAATGATTCTGGATAGCCCTTGTTAGTTAGGGTAGCAGTTATCCATTAACTTCCTGAAGTGAAACTAGTACTGTTTTAAGTTCCTGTAAAGCCTTAGCAGGAGACAACAGTGATGTTTTTCTGATCTTTATGTTCTTTTTCTTTGTTGGTTGGGAGTTCACATTTCTATGTATTGTTTGAAAGGGAGTTTTGTTTAGTGCATTGATGATGTAAAAGCTTCACATAATAGGTATGTGCTCTCATTGGTGGAGGTGGTTATGCGGAGAAAGTAGCTGTACCTACTGGACAAGTTCTTCCTATTCCATCAGGTGTGTCTTTACAAGATGCGGCTAGCTTTCCTGAAGTGGTGTGCACTGTTTGGTCGACCATTTTCATGACGAGCAAGCTTTCCTCTGGTGAAACGTTTCTGGTGATTAGACAGACCATAGCTATTCTTTAAAACAATTTGTTGTTTAGCAGTAGTTCCTTTTCTTTTATCTGTGCAGATTATCAGCCATTTAGTCAATTGGCAGAATCTTTTGGGTAGTATGTTCACAATTGAATCTTTATATCCCTGATTCCGGTCGACTAAGATCAAGTACGTGAAATAACTAATAGCTACATGTGTTACTTTCAGATACATGGAGGCTCTAGTGGAATTGGTACGTTTGCCATTCAAATGGCTAAGTGCCTTGGAGTCAAAGTTTTCATCACAGCAGGTTCATGATGATTTCTTATCTTATTATGGAACTGAAATCATTCAGCTAACCATGTCAAATCTTGTTAACCAGGAAGTGAGGAAAAACTTTCCGCATGCAAAGAACTCGGGGCTGATGTTTGCATCAATTACAAGACTGAAGACTTTGTTACACGCATCAAGGAAGAAACAGGAGGGAAAGGTAATCATTCTCATAGGCATCATTTATTATATTAGAAACTAGGTCTTCTTGATAAACAAACTACAACTACGCCTCAGTTCCAAATAAGTTGGAAACTTGGTCTTTGTGATATCAATTAAAATTCGAATATGCATGTTTCTGGAGAAATTATGATGGTTATCATATATCTCTGGGGGCTACAGGGGCAAGCAGTCAATTTCTTTTCATGTCTTACATTGATGATATTCTAACTTCAATGTTCAAAACAGGTGTTGATGTCATACTAGATAATATAGGAGGTTCATACTTCCAACGGAACCTTGACAGCCTCAATGTTGATGGTAGGCTCTTCATTATTGGTTTTATGGGAGGAACAGTGACACAAGTAAATCTTGGCTGTTTGTTAGCAAGACGCCTTACAGTGCAGGGTAAGTGCAGATGTGCTCTGATATATTTTGAGTGAACTTTTCTGTGAAATGTATTCTTAAACTTGATATGGTGAACTTGTCTGACCAAATACTCGAACAAGAATGCTGTTAGTCAACTGGAAGAGAGATATCTTAAGACACGCTACTGTAATTCCAGTTTTCTTTCTATTCCCACCCCACTCTGACTAGCTCAATGAGTGGGGCAGAGAATGTATTCATATAGTTGCACATGCCAATAGATGACTTCTAAGGTCTAGTGTTCAGTTGGGCTTAGTGTGTAGATTCAGTTGGTTCATTCCATGGGGAAGCAACGGTTATCAATTGCAGCTGCAAAGCAATCTTAATTTACCCTGGCCTTAATATTCTCTGACTTCTCTTTATGCTGCACCTTATTTGTACATGCAATTGCTTCTACTTCAACGGAGCTTAAATAAAAGAAGTTTCTCTCTCTCTCTCTCTCTCATGTGTGTGTGTGTATCCAGGTCCTAGTGTTCTCCACTTCGCAAATGAACTGTCTTGAGTCTCGGTGTTCATTTGCCTCGTTGATATCCCTTATTTTGACAGAGTGAGAAGCTTACTTTTGTGACACGTTGAAACCATGTTTTTGTATCTTTCTTCCATTTTTATAAGGCTCTATAACATATCCTAATCATGCTCCTTTATTTTTGTCCTCTTTACTTTTCCTCACTTCACTTCTACTGCTGTTCCTCCGTAGCTTTATTTCCTTGCAGTAATCAGCCCCAATATCTCATAACAGTCCTGGCTTCCAACCACCAACCATGGTTTATAATAAACTGGTGACTTCTAAGTGCACTGACATACTTAAATTTATTTCAGGAAGGGAAAGATAAGATAGTGTAACAGAAGCAAAGGCAACACAGGCTTCCACTGATATTGCTGGCTTTTTTTATTAGATGGTATAGGTCTCAATTTAATATCAGGAGAACTGAAATATTACGATTCATTTCACATATATTTACCTTCTCAAAGAAAAAAGAAAAAAAAAGAGAAGGTGATTCAGCTTTCATGTGAAGTTGAGCTATATATCGTCTTTGCAATCCTCATTTAGTAATTCTTCGTCAACTTGGTCAAATCTCGGCCTCTTCCTCCGGTGTACTTGTTATGGTTAGTTTGAGTATTGAAATTTGGAAATTATTAGTCCAGCTCTCCCATTCTCGCATAATCCTATACAACGTATCTTTTTCCTCCCATGTTCTAGCTGATCCTTCTCTTAGTTGAAGAACTTTGAGGGAGTTCTTTTTTTATAATGAAGTGCACAGACAATTGGAGAGAGAAAAATCTTTTGGAATGTTGAAATCTAGTCTCATGGATTTTTTTCTCTGAATGAATGCCATGGTCCTCATTTTTTATTGTGTTTCAGTAGTTTTTATGTCGATTTGTGACTTTTCTACAGCTGCTGGCTTGCGTAGTAGAAGCCCAAAAAACAAAGCTCAAATTGTGAGAGAAGTGGAAAAAAATGTTTGGCCTGCAATTGCAGCAGGGAAGGTGAAACCGGTGGTGTACAAGTACTTCCCCTTAGCAGAAGCTGCTGAGGCTCACCAGTTAATGGAAAGCAGCAACCACATTGGAAAGATTCTGCTCACTGTTTGAATGTTGTAAAAGAGAGATTTTCTTGTTCTTAGTGTTAAAATAGCCTGTACTTACAGCCAGTCCCT-CCCCCCCCCCCCCCTCCAAACATCTGCTGCATGTACACTTTGCAATGTTTCCAATAAAGCAAAACCTTTTTTATGATTTCTCACTTTCCATCTTCTGAGTGCTTTAAGTTTTCGACGATTTTTCGATGTATATGTTTGAAATTGAAAGTATTTTTTAGAAACAAATTTGAA</genome_strand>
        <mrna_strand>TAGAN-AAAAGTAGAGCGTTCAAGAACAAGAATGGAAACAAAATACAAGAAAGTCGTGTAAACCTCTCCAACTCTCTTTCCAAAACCTTGTTAACTCAGTGAGTAAAATTGATTGTGATTAAGGATGAAGGCTGTTGTAATCACAAGCCCTGGTGGTCCAGAAGTGTTGAAGCTTCAAGAAGTGGAAGACCCACAAATTAAAGATGATGAAATCTTGATTAAGATAGCAGCTACTGCCCTTAATAGAGCTGATACCCTTCAACGCCAAGGTAAATACCCACCCCCTAAAGGCGACAGTGAATACCCAGGTCTTGAATGTTCTGGAACTGTTGAAGCAGTCGGCAAGGAAGTTACTCGCTGGAAAATTGGTGATCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGTGCTCTCATTGGTGGAGGTGGTTATGCGGAGAAAGTAGCTGTACCTACTGGACAAGTTCTTCCTATTCCATCAGGTGTGTCTTTACAAGATGCGGCTAGCTTTCCTGAAGTGGTGTGCACTGTTTGGTCGACCATTTTCATGACGAGCAAGCTTTCCTCTGGTGAAACGTTTCTG...............................................................................................................................................................................................................ATACATGGAGGCTCTAGTGGAATTGGTACGTTTGCCATTCAAATGGCTAAGTGCCTTGGAGTCAAAGTTTTCATCACAGCAG........................................................................GAAGTGAGGAAAAACTTTCCGCATGCAAAGAACTCGGGGCTGATGTTTGCATCAATTACAAGACTGAAGACTTTGTTACACGCATCAAGGAAGAAACAGGAGGGAAAG........................................................................................................................................................................................................................................................GTGTTGATGTCATACTAGATAATATAGGAGGTTCATACTTCCAACGGAACCTTGACAGCCTCAATGTTGATGGTAGGCTCTTCATTATTGGTTTTATGGGAGGAACAGTGACACAAGTAAATCTTGGCTGTTTGTTAGCAAGACGCCTTACAGTGCAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGGCTTGCGTAGTAGAAGCCCAAAAAACAAAGCTCAAATTGTGAGAGAAGTGGAAAAAAATGTTTGGCCTGCAATTGCAGCAGGGAAGGTGAAACCGGTGGTGTACAAGTACTTCCCCTTAGCAGAAGCTGCTGAGGCTCACCAGTTAATGGAAAGCAGCAACCACATTGGAAAGATTCTGCTCACTGTTTGAATGTTGTAAAAGAGAGATTTTCTTGTTCTTAGTGTTAAAATAGCCTGTACTTACAGCCAGTCCCTCCCCCCCCCCCCCCCTCCAAACATCTGCTGCATGTACACTTTGCAATGTTTCCAATAAAGCAAAACCTTTTTTATGATTTCTCACTTTCCATCTTCTGAGTGCTTTAAGTTTTCGACGATTTTTCGATGTATATGTTTGAAATTGAAAGTATTTTTTAGAAACAAATTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U579868" ref_strand="+" ref_description="SGN-U579868 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|76160992|gb|ABA40459.1| (e_value=2e-38) NADPH quinone oxidoreductase-like protein [Solanum tuberosum]; (*ATH) AT4G21580.3 (e_value=1e-31) |; (*SWP) sp|Q53FA7|QORX_HUMAN (e_value=2e-15) Putative quinone oxidoreductase OS=Homo sapiens GN=TP53I3; ">
      <seq>ggcgttcaagaacaagaatggaaacaaaatacaagaaagtcgtgtaaacctctccaactctctttccaaaaccttgttaactcagtgagtaaaattgattgtgattaaggatgaaggctgttgtaatcacaagccctggtggtccagaagtgttgaagcttcaagaagtggaagacccacaaattaaagatgatgaaatcttgattaagatagcagctactgcccttaatagagctgatacccttcaacgccaaggtaaatacccaccccctaaaggcgacagtgaatacccaggtcttgaatgttctggaactgttgaagcagtcggcaaggaagttactcgctggaaaattggtgatcaggtttgtctgattacagtttccatttttttaaaaaaagatgtcaactttataattgaaattgaggcttaattgttgattgttgtttattctcttcatgttgggtaatatgacagtgaggaagttatctgaaaatgcacaaatcgttgaatttatgggactaggctaagaacagacagggaacaaaggaataagatatctgaaaatgtctaatctttggaatcttactagctccatttcaatttattttgtgtgtgtgttttttcacttggcatcaagtttaagaaagtaaagagatacttttaattttaattttgaggttttaaactaaaataggtagagtgaactaaagtgnctttggaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="+" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="108971" stop="110296"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109270" g_stop="109996" g_length="727"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="727" r_length="727" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="+" ref_id="SGN-U579868" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>727</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U579868" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109270" e_stop="109996"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCGTTCAAGAACAAGAATGGAAACAAAATACAAGAAAGTCGTGTAAACCTCTCCAACTCTCTTTCCAAAACCTTGTTAACTCAGTGAGTAAAATTGATTGTGATTAAGGATGAAGGCTGTTGTAATCACAAGCCCTGGTGGTCCAGAAGTGTTGAAGCTTCAAGAAGTGGAAGACCCACAAATTAAAGATGATGAAATCTTGATTAAGATAGCAGCTACTGCCCTTAATAGAGCTGATACCCTTCAACGCCAAGGTAAATACCCACCCCCTAAAGGCGACAGTGAATACCCAGGTCTTGAATGTTCTGGAACTGTTGAAGCAGTCGGCAAGGAAGTTACTCGCTGGAAAATTGGTGATCAGGTTTGTCTGATTACAGTTTCCATTTTTTTAAAAAAAGATGTCAACTTTATAATTGAAATTGAGGCTTAATTGTTGATTGTTGTTTATTCTCTTCATGTTGGGTAATATGACAGTGAGGAAGTTATCTGAAAATGCACAAATCGTTGAATTTATGGGACTAGGCTAAGAACAGACAGGGAACAAAGGAATAAGATATCTGAAAATGTCTAATCTTTGGAATCTTACTAGCTCCATTTCAATTTATTTTGTGTGTGTGTTTTTTCACTTGGCATCAAGTTTAAGAAAGTAAAGAGATACTTTTAATTTTAATTTTGAGGTTTTAAACTAAAATAGGTAGAGTGAACTAAAGTGTCTTTGGAAAAAAA</genome_strand>
        <mrna_strand>GGCGTTCAAGAACAAGAATGGAAACAAAATACAAGAAAGTCGTGTAAACCTCTCCAACTCTCTTTCCAAAACCTTGTTAACTCAGTGAGTAAAATTGATTGTGATTAAGGATGAAGGCTGTTGTAATCACAAGCCCTGGTGGTCCAGAAGTGTTGAAGCTTCAAGAAGTGGAAGACCCACAAATTAAAGATGATGAAATCTTGATTAAGATAGCAGCTACTGCCCTTAATAGAGCTGATACCCTTCAACGCCAAGGTAAATACCCACCCCCTAAAGGCGACAGTGAATACCCAGGTCTTGAATGTTCTGGAACTGTTGAAGCAGTCGGCAAGGAAGTTACTCGCTGGAAAATTGGTGATCAGGTTTGTCTGATTACAGTTTCCATTTTTTTAAAAAAAGATGTCAACTTTATAATTGAAATTGAGGCTTAATTGTTGATTGTTGTTTATTCTCTTCATGTTGGGTAATATGACAGTGAGGAAGTTATCTGAAAATGCACAAATCGTTGAATTTATGGGACTAGGCTAAGAACAGACAGGGAACAAAGGAATAAGATATCTGAAAATGTCTAATCTTTGGAATCTTACTAGCTCCATTTCAATTTATTTTGTGTGTGTGTTTTTTCACTTGGCATCAAGTTTAAGAAAGTAAAGAGATACTTTTAATTTTAATTTTGAGGTTTTAAACTAAAATAGGTAGAGTGAACTAAAGTGNCTTTGGAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U576288" ref_strand="+" ref_description="SGN-U576288 Tomato 200607#2 [16 ESTs aligned] (*GB) gi|56201401|dbj|BAD20774.2| (e_value=1e-177) beta-galactosidase [Raphanus sativus]; (*ATH) AT2G28470.1 (e_value=3e-178) | Symbol: None | beta-galactosidase, putative / lactase, putative, similar to Beta-galactosidase precursor SP:P48980 from (Lycopersicon esculentum) | chr2:12175930-12180647 REVERSE | Aliases: T17D12.3, T17D12_3; (*SWP) sp|Q9SCV4|BGAL8_ARATH (e_value=3e-177) Beta-galactosidase 8 OS=Arabidopsis thaliana GN=BGAL8; ">
      <seq>gcttaactatggaaagtaagaaattgttgttggtaataatattgtctatgcttttagtttttgaaaaaggggcgtcgacgacagtaacttatgatcacaaggcattggttattgatggaaagaggagaattttgcaatcaggatcaatacattatccaagaactacacctgaaatatggccagagatcattagaaaggctaaggaaggcggattggacgtgatagagagttatgttttctggaattatcatgaacctgtcaaaggagagtactactttgaaggcaggtttgaccttgtacggtttgtgaagacagtacaagaagctggcctatacgtgcatctccgtataggtccatatgcctgtgctgaatggaactatgggggcttccctatgtggctacactttatccctggaataaagtttcgaacaacaaatgaactttttaagaatgaaatgaaactctttcttgccaagattgttgatcttatgaaggatgagaacctcttcgctacacaaggaggtccaatcatactcgctcaggttgtttctttcatctttgtgatgatggatgtctttgtggtagtttaaatcttcttccttgaatctacactcttattacttgatagtgcaccttcttcttttcaattttagttgttgcattttttgtgttaatcagtgatctatcctcttaacaggtagaaaatgagtatggaaatgttgaatgggcatatggagtcagcggagagctatatgtaaaatgggctgcaaaaactgcctgttaatcttaatacgaccgtcccttgggtgatgtgtgcacaagaagatgcacctgattcagttataaacacatgtaatggattctattgtgatcgcttcactccaaattccctgtccaagccaaagatgtggacagaaaactacgttggatggttccttgcatttggttatcctgttccttttcgacctgttgaagacttggcttttgctgtagcacgtttttttgaaactggtggtacatttcaaaattattacatgtattttggtggcaccaattttggtcgaacagctggaggtcctctagtagcaacaagctacgactatgatgcccccatagatgagtatggtttcataagtcagccaaagtggggccacctacgcgatttacacaaggctataaaacactgtgaagaatatttggtcaatgcagatccaattcatttgtcccttggtctgaaacttgaggcacatgtatattacaagagctccaatgactgtgcagccttccttgctaactatggtaacagttcagatgcaaatgttacatttaatgggaagtcatattttcttcatgcttggtctgttagcatccttccagactgtaagaatgtcatattcaacacggcgaaggttgtttcacaaaaaacgacaggaagtacagcatttactcacaacacggttactattgaaaattcgctggagtcagatccttggggctggtaccaagaaaaagttggcatcgcgaataatcattcgtttgcatcaccgcgcttactagagcagataaatacaacaaaggataccagtgatttcctttggtatacaacaagtataaatgtggaggagaacatcaagaagaggaaagccaaagaattgcagttaatggttggaagcttaggacatgcagctcttgtttttgtaaacaagaaaccagttggtaactagctcatctaatctcgtcttctttaaccgtgtttaataacttagataggaactccaatttgatcataacaacaaagtaaaagtatagtttttctgatcggttaagttttttgatgaggcggttcacacaactcaacggatccaagaagaagactaatatgcttcagtttttaccttgaacattacttaagactacagagaattgctaagatagctgatttggagccttctttaggatttggctatggtaatcatgatgatgcaagctttgtgctaagtaagaaaatccatcttaagcaaggaaacaacacagtggacatattgagcatgatggttggtttgcagaactatggaccatggtttgacatctctggagcaggtgtattttctgttatcttcagtgatttgaagaattccaagaatttttcttctacagaatggatctaccaggtaggtcttgaaggtgagtatcttggacttgataaagttagtcttgcaaatagttctctgtggattcaggggagttctgtcccagtacatcagagtttgatatggtacaagacaagtttttctcctccagaaggaagaggccctatatcgctaaatctgtcaagtatgggtaaaggtcaggcatgggtaaatgggcagcatatagggagatactggtcttcttatcgttcaccctcaacaggctgttctgataattgtgactacagaggagcttatgattcatggaaatgtttgaagaaatgtggtcaacctgctcaagtgttgtaccatgtaccacgcagttggttaaagccagaaaagaacttgcttgtgctgcatgaagagcttggtggtgacccttcaaaaatatctttctcaacgcgatctgggcaaacaatttgtgctcatgtatctgagttagatcctccacctgttgatacttggaagacagacaaagatcaaacatctcaagaaccttcattgcaactgaattgtgagcaaggatggactatcaccgcagttaactttgctagctttggaactcctacaggagattgtggagcattcattgaagggagttgccattgggatgtgttatccatagttcatcaggggtgtgtgggcaagtcaggatgttccattcctatcaccatggctaaacttggtgacccatgtcctggagtacaaaaaagtctggctgttgaagctttttgcagtgtttgaatcatcaaattctatggttggtgtagtcattagcttagcgtggtaaccttctttgtcaaattttctgcttctagcaatcaaatgtactggtctttgttttagccagagccagctttacttcggtacagccctaatcttgatgatacaaaagagtttataagtcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="-" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="120220" stop="113643"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="119920" g_stop="119748" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="119747" i_stop="119633" i_length="115">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="119632" g_stop="119537" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="269" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="119536" i_stop="119359" i_length="178">
            <donor d_prob="0.768" d_score="1.00"/>
            <acceptor a_prob="0.789" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="119358" g_stop="119246" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="382" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="119245" i_stop="119146" i_length="100">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.766" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="119145" g_stop="119079" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="449" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="119078" i_stop="118984" i_length="95">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="118983" g_stop="118592" g_length="392"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="842" r_length="393" r_score="0.992"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="118591" i_stop="118396" i_length="196">
            <donor d_prob="0.293" d_score="1.00"/>
            <acceptor a_prob="0.818" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="118395" g_stop="118307" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="843" r_stop="931" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="118306" i_stop="118213" i_length="94">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="118212" g_stop="118107" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="932" r_stop="1037" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="118106" i_stop="118029" i_length="78">
            <donor d_prob="0.785" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="118028" g_stop="117941" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1038" r_stop="1125" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="117940" i_stop="117837" i_length="104">
            <donor d_prob="0.880" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="117836" g_stop="117718" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="1126" r_stop="1244" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="117717" i_stop="117391" i_length="327">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.727" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="117390" g_stop="117226" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="1245" r_stop="1409" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="117225" i_stop="117018" i_length="208">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.825" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="117017" g_stop="116818" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="1410" r_stop="1609" r_length="200" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="116817" i_stop="116621" i_length="197">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="116620" g_stop="116164" g_length="457"/>
          <reference_exon_boundary r_type="cDNA" r_start="1610" r_stop="2066" r_length="457" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="116163" i_stop="116043" i_length="121">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="116042" g_stop="115938" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="2067" r_stop="2171" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="115937" i_stop="115515" i_length="423">
            <donor d_prob="0.759" d_score="1.00"/>
            <acceptor a_prob="0.936" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="115514" g_stop="115404" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="2172" r_stop="2282" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="115403" i_stop="115218" i_length="186">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="115217" g_stop="115006" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="2283" r_stop="2494" r_length="212" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="115005" i_stop="114898" i_length="108">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.874" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="114897" g_stop="114570" g_length="328"/>
          <reference_exon_boundary r_type="cDNA" r_start="2495" r_stop="2822" r_length="328" r_score="1.000"/>
        </exon>
        <intron i_serial="16">
          <gDNA_intron_boundary i_start="114569" i_stop="114217" i_length="353">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.903" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="17">
          <gDNA_exon_boundary g_start="114216" g_stop="113942" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="2823" r_stop="3097" r_length="275" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="-" ref_id="SGN-U576288" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>3096</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U576288" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="119920" e_stop="119748"/>
          <exon e_start="119632" e_stop="119537"/>
          <exon e_start="119358" e_stop="119246"/>
          <exon e_start="119145" e_stop="119079"/>
          <exon e_start="118983" e_stop="118592"/>
          <exon e_start="118395" e_stop="118307"/>
          <exon e_start="118212" e_stop="118107"/>
          <exon e_start="118028" e_stop="117941"/>
          <exon e_start="117836" e_stop="117718"/>
          <exon e_start="117390" e_stop="117226"/>
          <exon e_start="117017" e_stop="116818"/>
          <exon e_start="116620" e_stop="116164"/>
          <exon e_start="116042" e_stop="115938"/>
          <exon e_start="115514" e_stop="115404"/>
          <exon e_start="115217" e_stop="115006"/>
          <exon e_start="114897" e_stop="114570"/>
          <exon e_start="114216" e_stop="113942"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGAACTATGGAAAGTAAGAAATTGTTGTTGGTAATAATATTGTCTATGCTTTTAGTTTTTGAAAAAGGGGCGTCGACGACAGTAACTTATGATCACAAGGCATTGGTTATTGATGGAAAGAGGAGAATTTTGCAATCAGGATCAATACATTATCCAAGAACTACACCTGAAGTGAGTGTTTTCTTCTTATGTATGGCAATGTGGGGTTTTCTCTTTTCTTCTTGATTTTCAGTTTGAGAATATGTAACATGGATTATAAAGGGGTTCGATCTCTTGTTGAATGTAGATATGGCCAGAGATCATTAGAAAGGCTAAGGAAGGCGGATTGGACGTGATAGAGAGTTATGTTTTCTGGAATTATCATGAACCTGTCAAAGGAGAGGTATGAAGTCATTTCAAGTTTGTGTTTTTACGCGAGTTTGATTGGTCTCCCCCCTTGCGATGCTCACTAGTTGGAATTTTTATCTGTCAATTTAGCCCATAGGAAGTTGTTTTACCTCATTTTTGGGCAATGCAATTAGAGCAGTGTCAATTTTAATTATCACTTCCTACTCTTGCAGTACTACTTTGAAGGCAGGTTTGACCTTGTACGGTTTGTGAAGACAGTACAAGAAGCTGGCCTATACGTGCATCTCCGTATAGGTCCATATGCCTGTGCTGAATGGAACTATGGGTTAGTTCATCATAGCTAACTCATTTTCTTATTTTATCATGTACATCCTAATGGGGTCTTAACTTTTCGTTTTACTATCTCCGTCCTGTTCTCTGAGCAGGGGCTTCCCTATGTGGCTACACTTTATCCCTGGAATAAAGTTTCGAACAACAAATGAACTTTTTAAGGAAAGTGTTGACCAGTCTGTGTTTTTTTTTTCTTCTATTTTTTGGTCCTATTAAATGTTCAATAGTTGAAGAAACCTGTATTGTTTTCAATGCAGAATGAAATGAAACTCTTTCTTGCCAAGATTGTTGATCTTATGAAGGATGAGAACCTCTTCGCTACACAAGGAGGTCCAATCATACTCGCTCAGGTTGTTTCTTTCATCTTTGTGATGATGGATGTCTTTGTGGTAGTTTAAATCTTCTTCCTTGAATCTACACTCTTATTACTTGATAGTGCACCTTCTTCTTTTCAATTTTAGTTGTTGCATTTTTTGTGTTAATCAGTGATCTATCCTCTTAACAGGTAGAAAATGAGTATGGAAATGTTGAATGGGCATATGGAGTCAGCGGAGAGCTATATGTAAAATGGGCTGCAGAAACTG-CTGTTAATCTTAATACGACCGTCCCTTGGGTGATGTGTGCACAAGAAGATGCACCTGATTCAGTTGTAAGGGGGTTATGGTATTCATTTGCAGTATATCAGAAGCATTTTTGTTAGTATGTTACAAAATGCAGTCATCTCAAGACCCTTTTGCACTAAACTTCCTGCTGATGTTACCATTGATAGTTTTGCTTCTCAAAATCAACAGTGAAAGGACTCCAAAATTAGTGAAGTGATAACTGCAAACCTGTTGATTATGCAGATAAACACATGTAATGGATTCTATTGTGATCGCTTCACTCCAAATTCCCTGTCCAAGCCAAAGATGTGGACAGAAAACTACGTTGGATGGTAAATCTTCTTCCTCTTTTATTATCATCGGGAGCTCTGACTCATGACATGTTTTTTTCCTTCATCACTTGCAAGGTGTTGTTTTGTTTTGCAGGTTCCTTGCATTTGGTTATCCTGTTCCTTTTCGACCTGTTGAAGACTTGGCTTTTGCTGTAGCACGTTTTTTTGAAACTGGTGGTACATTTCAAAATTATTACATGGTAAATACGTGTTACTATTCACATGTTGTTCTTGATCTTGTTAGTTCTGGGATAAGTAATGCCATCTATTTTGTTTAGTATTTTGGTGGCACCAATTTTGGTCGAACAGCTGGAGGTCCTCTAGTAGCAACAAGCTACGACTATGATGCCCCCATAGATGAGTATGGTAATGATATCTTAAATATAAGAGGAAGCATTTGATCTATTTAAGAATATCCTGAAGCTGCTTTTTGAATGCTATTCTAATCTAATCATACGTACTTGATACAGGTTTCATAAGTCAGCCAAAGTGGGGCCACCTACGCGATTTACACAAGGCTATAAAACACTGTGAAGAATATTTGGTCAATGCAGATCCAATTCATTTGTCCCTTGGTCTGAAACTTGAGGTAAATGACACATAGTGAGATGTCTTCGATCCAGATTTCAGCTGTTTAATAGATTAGAGGTAGATAACACACAAGTTTGAATCTAAAAAAACCGTAAAGAAAGTGTACAAGAAGCTAACTAAAAGGTGAGGATTGTCTAAGTTCATATAAGAAAACTTCAGCTCGTACCCTTAATCTATATGGGGTTGTACACCTCCTGCATGCTAGATATCTTATTTTTCCTCATCTGAATTAGCTTTTTTGTCAGCCTGTGAGTAACTATATTCTTTAATGTTGGATCAATGTCTCGTGTTCTTTTGATTTTGACACATCAGAAATGTCTAACAGGCACATGTATATTACAAGAGCTCCAATGACTGTGCAGCCTTCCTTGCTAACTATGGTAACAGTTCAGATGCAAATGTTACATTTAATGGGAAGTCATATTTTCTTCATGCTTGGTCTGTTAGCATCCTTCCAGACTGTAAGAATGTCATATTCAACACGGCGAAGGTACTGACTGCAGTCACATAAGTACATCAATTCTTCCTACTCATTTACTAGAAATGCATAGAATAAATATCCTGATCACCTTGCTTATAACATTAAAACTGTGAAAGTGTAACTCATTTTTAAGAAACTTTACAGAAGTCTATTTTGCCTCAATTTTTGTTACTGCTAATCTAACAGACTTTTTTGCCTTTACTCATAATGAATAAAGGTTGTTTCACAAAAAACGACAGGAAGTACAGCATTTACTCACAACACGGTTACTATTGAAAATTCGCTGGAGTCAGATCCTTGGGGCTGGTACCAAGAAAAAGTTGGCATCGCGAATAATCATTCGTTTGCATCACCGCGCTTACTAGAGCAGATAAATACAACAAAGGATACCAGTGATTTCCTTTGGTATACAACAAGGTAAATCCATTTTCCTTCACTTGTCATTGTTATGTTACATTTCTTTACGGAAGAAGCTGATCTGTAGCTGCTAATATTTTGCTTCCATGAGAAACTAAAGGGCATACCCCACCTTGGTTCTCTGGTTTAATCATTTGTTCAATATGATAAGCTATTTACTTCATTGATGTAATATCTCTTTTTCTTTCTCTTGCCAGTATAAATGTGGAGGAGAACATCAAGAAGAGGAAAGCCAAAGAATTGCAGTTAATGGTTGGAAGCTTAGGACATGCAGCTCTTGTTTTTGTAAACAAGAAACCAGTTGGTAACTAGCTCATCTAATCTCGTCTTCTTTAACCGTGTTTAATAACTTAGATAGGAACTCCAATTTGATCATAACAACAAAGTAAAAGTATAGTTTTTCTGATCGGTTAAGTTTTTTGATGAGGCGGTTCACACAACTCAACGGATCCAAGAAGAAGACTAATATGCTTCAGTTTTTACCTTGAACATTACTTAAGACTACAGAGAATTGCTAAGATAGCTGATTTGGAGCCTTCTTTAGGATTTGGCTATGGTAATCATGATGATGCAAGCTTTGTGCTAAGTAAGAAAATCCATCTTAAGCAAGGAAACAACACAGTGGACATATTGAGCATGATGGTTGGTTTGCAGGTAAGTCCATCTCAGTAAATAGCCTATTCCAATGCTTTGCCTATTGAAGCACATATTATTGAAGTCATTGCTTCCACTTCAATTACATTAATTCTTACTCATTTTTCATGTGATTCTCCAGAACTATGGACCATGGTTTGACATCTCTGGAGCAGGTGTATTTTCTGTTATCTTCAGTGATTTGAAGAATTCCAAGAATTTTTCTTCTACAGAATGGATCTACCAGGTTCTTGATGTGACAAACAAATCCTTTTTATTATGTCCATTTCGTGCGGTCTTCATGTTCTTGTTTAAATATGATTTCACATTCCTAACTATAAAGTTAACAGTACAAGTAAATCAAATGCCAAAAAGAAACTCTAAGAGTACTTGAAGCAAACTAGGTAATATGAAAAGGGACAAAGGAAGTAACAAGTCAGTGAAAATATAAAGATGTGTGACAGTATCTTCTAACAAGAACATTAGAGGACTTTGTGTAAAGGAATAATGAAGCAGCATAACTATTGGTATAAATTTGAAGACTTCCTTTTCTTTTTCCGAATTCTCTTGGGGGTGAGGGGTTGATTCATTTTCGTCTCTGTAATCTCAGAAGGTTATGGCTTTGTTCTTGTAAGATCACAAGGATAATATGAAACTTGTCTTACTTCAGGTAGGTCTTGAAGGTGAGTATCTTGGACTTGATAAAGTTAGTCTTGCAAATAGTTCTCTGTGGATTCAGGGGAGTTCTGTCCCAGTACATCAGAGTTTGATATGGTACAAGGTGTGTAGAATTGCTTGGTTCACTTGTTTTATGTCAACTGCTTATCATTTAGGTACCTTTCTTCCGACAACAAAAGAAAAAAATACCTTTCTAGGAATAGAGTGGCAGTTAATGTCAATGCTGGTGCTAAGATAATTTGTTGCATCTGTTGTATTCTTCTCTTGATTCTGGATATCTTATTTCCAGACAAGTTTTTCTCCTCCAGAAGGAAGAGGCCCTATATCGCTAAATCTGTCAAGTATGGGTAAAGGTCAGGCATGGGTAAATGGGCAGCATATAGGGAGATACTGGTCTTCTTATCGTTCACCCTCAACAGGCTGTTCTGATAATTGTGACTACAGAGGAGCTTATGATTCATGGAAATGTTTGAAGAAATGTGGTCAACCTGCTCAAGTGTTGTGAGTATATAGCTTTGGCTAGTGTATTTTATTCTTGATGCTTTGCGTTTTCCTGATCCTCCTTGCAAATAGATTTCACCGAGTACTGACCATTAAACCTTCATATAGGTACCATGTACCACGCAGTTGGTTAAAGCCAGAAAAGAACTTGCTTGTGCTGCATGAAGAGCTTGGTGGTGACCCTTCAAAAATATCTTTCTCAACGCGATCTGGGCAAACAATTTGTGCTCATGTATCTGAGTTAGATCCTCCACCTGTTGATACTTGGAAGACAGACAAAGATCAAACATCTCAAGAACCTTCATTGCAACTGAATTGTGAGCAAGGATGGACTATCACCGCAGTTAACTTTGCTAGCTTTGGAACTCCTACAGGAGATTGTGGAGCATTCATTGAAGGGAGTTGCCATTGGGATGTGTTATCCATAGTTCATCAGGTAATATTATTAGCATTTCTTCATTTGTTTCTACTTATATTGGTGATAACTTTGGAAAATCCCCATATACTACTCAAAGTGTTGTTCATCAAGGCTTGAACTATCAAAGAATTATCAGATCCCACATTGGTTGAGGGAATGAAATTTGATCTCCTTGTTTTGACCCAGACAATCCTCATCCCATGAGCTAGATTTTGGGATTGAGTTAAACTTAATGTTCAATTTACTTCGCATGGTATCTCAGCCAGACCTATCGATTCTTGTTTCCTTCACAAGCTAGCTTTTGGATTTGAGTTAAGCCAAAGTCCATTTTATCGTATGTTTGGAACTGAAAATCTTGAACGACTACGCAGGGGTGTGTGGGCAAGTCAGGATGTTCCATTCCTATCACCATGGCTAAACTTGGTGACCCATGTCCTGGAGTACAAAAAAGTCTGGCTGTTGAAGCTTTTTGCAGTGTTTGAATCATCAAATTCTATGGTTGGTGTAGTCATTAGCTTAGCGTGGTAACCTTCTTTGTCAAATTTTCTGCTTCTAGCAATCAAATGTACTGGTCTTTGTTTTAGCCAGAGCCAGCTTTACTTCGGTACAGCCCTAATCTTGATGATACAAAAGAGTTTATAAGTCA</genome_strand>
        <mrna_strand>GCTTAACTATGGAAAGTAAGAAATTGTTGTTGGTAATAATATTGTCTATGCTTTTAGTTTTTGAAAAAGGGGCGTCGACGACAGTAACTTATGATCACAAGGCATTGGTTATTGATGGAAAGAGGAGAATTTTGCAATCAGGATCAATACATTATCCAAGAACTACACCTGAA...................................................................................................................ATATGGCCAGAGATCATTAGAAAGGCTAAGGAAGGCGGATTGGACGTGATAGAGAGTTATGTTTTCTGGAATTATCATGAACCTGTCAAAGGAGAG..................................................................................................................................................................................TACTACTTTGAAGGCAGGTTTGACCTTGTACGGTTTGTGAAGACAGTACAAGAAGCTGGCCTATACGTGCATCTCCGTATAGGTCCATATGCCTGTGCTGAATGGAACTATGG....................................................................................................GGGCTTCCCTATGTGGCTACACTTTATCCCTGGAATAAAGTTTCGAACAACAAATGAACTTTTTAAG...............................................................................................AATGAAATGAAACTCTTTCTTGCCAAGATTGTTGATCTTATGAAGGATGAGAACCTCTTCGCTACACAAGGAGGTCCAATCATACTCGCTCAGGTTGTTTCTTTCATCTTTGTGATGATGGATGTCTTTGTGGTAGTTTAAATCTTCTTCCTTGAATCTACACTCTTATTACTTGATAGTGCACCTTCTTCTTTTCAATTTTAGTTGTTGCATTTTTTGTGTTAATCAGTGATCTATCCTCTTAACAGGTAGAAAATGAGTATGGAAATGTTGAATGGGCATATGGAGTCAGCGGAGAGCTATATGTAAAATGGGCTGCAAAAACTGCCTGTTAATCTTAATACGACCGTCCCTTGGGTGATGTGTGCACAAGAAGATGCACCTGATTCAGTT....................................................................................................................................................................................................ATAAACACATGTAATGGATTCTATTGTGATCGCTTCACTCCAAATTCCCTGTCCAAGCCAAAGATGTGGACAGAAAACTACGTTGGATG..............................................................................................GTTCCTTGCATTTGGTTATCCTGTTCCTTTTCGACCTGTTGAAGACTTGGCTTTTGCTGTAGCACGTTTTTTTGAAACTGGTGGTACATTTCAAAATTATTACATG..............................................................................TATTTTGGTGGCACCAATTTTGGTCGAACAGCTGGAGGTCCTCTAGTAGCAACAAGCTACGACTATGATGCCCCCATAGATGAGTATG........................................................................................................GTTTCATAAGTCAGCCAAAGTGGGGCCACCTACGCGATTTACACAAGGCTATAAAACACTGTGAAGAATATTTGGTCAATGCAGATCCAATTCATTTGTCCCTTGGTCTGAAACTTGAG.......................................................................................................................................................................................................................................................................................................................................GCACATGTATATTACAAGAGCTCCAATGACTGTGCAGCCTTCCTTGCTAACTATGGTAACAGTTCAGATGCAAATGTTACATTTAATGGGAAGTCATATTTTCTTCATGCTTGGTCTGTTAGCATCCTTCCAGACTGTAAGAATGTCATATTCAACACGGCGAAG................................................................................................................................................................................................................GTTGTTTCACAAAAAACGACAGGAAGTACAGCATTTACTCACAACACGGTTACTATTGAAAATTCGCTGGAGTCAGATCCTTGGGGCTGGTACCAAGAAAAAGTTGGCATCGCGAATAATCATTCGTTTGCATCACCGCGCTTACTAGAGCAGATAAATACAACAAAGGATACCAGTGATTTCCTTTGGTATACAACAAG.....................................................................................................................................................................................................TATAAATGTGGAGGAGAACATCAAGAAGAGGAAAGCCAAAGAATTGCAGTTAATGGTTGGAAGCTTAGGACATGCAGCTCTTGTTTTTGTAAACAAGAAACCAGTTGGTAACTAGCTCATCTAATCTCGTCTTCTTTAACCGTGTTTAATAACTTAGATAGGAACTCCAATTTGATCATAACAACAAAGTAAAAGTATAGTTTTTCTGATCGGTTAAGTTTTTTGATGAGGCGGTTCACACAACTCAACGGATCCAAGAAGAAGACTAATATGCTTCAGTTTTTACCTTGAACATTACTTAAGACTACAGAGAATTGCTAAGATAGCTGATTTGGAGCCTTCTTTAGGATTTGGCTATGGTAATCATGATGATGCAAGCTTTGTGCTAAGTAAGAAAATCCATCTTAAGCAAGGAAACAACACAGTGGACATATTGAGCATGATGGTTGGTTTGCAG.........................................................................................................................AACTATGGACCATGGTTTGACATCTCTGGAGCAGGTGTATTTTCTGTTATCTTCAGTGATTTGAAGAATTCCAAGAATTTTTCTTCTACAGAATGGATCTACCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGGTCTTGAAGGTGAGTATCTTGGACTTGATAAAGTTAGTCTTGCAAATAGTTCTCTGTGGATTCAGGGGAGTTCTGTCCCAGTACATCAGAGTTTGATATGGTACAAG..........................................................................................................................................................................................ACAAGTTTTTCTCCTCCAGAAGGAAGAGGCCCTATATCGCTAAATCTGTCAAGTATGGGTAAAGGTCAGGCATGGGTAAATGGGCAGCATATAGGGAGATACTGGTCTTCTTATCGTTCACCCTCAACAGGCTGTTCTGATAATTGTGACTACAGAGGAGCTTATGATTCATGGAAATGTTTGAAGAAATGTGGTCAACCTGCTCAAGTGTT............................................................................................................GTACCATGTACCACGCAGTTGGTTAAAGCCAGAAAAGAACTTGCTTGTGCTGCATGAAGAGCTTGGTGGTGACCCTTCAAAAATATCTTTCTCAACGCGATCTGGGCAAACAATTTGTGCTCATGTATCTGAGTTAGATCCTCCACCTGTTGATACTTGGAAGACAGACAAAGATCAAACATCTCAAGAACCTTCATTGCAACTGAATTGTGAGCAAGGATGGACTATCACCGCAGTTAACTTTGCTAGCTTTGGAACTCCTACAGGAGATTGTGGAGCATTCATTGAAGGGAGTTGCCATTGGGATGTGTTATCCATAGTTCATCAG.................................................................................................................................................................................................................................................................................................................................................................GGGTGTGTGGGCAAGTCAGGATGTTCCATTCCTATCACCATGGCTAAACTTGGTGACCCATGTCCTGGAGTACAAAAAAGTCTGGCTGTTGAAGCTTTTTGCAGTGTTTGAATCATCAAATTCTATGGTTGGTGTAGTCATTAGCTTAGCGTGGTAACCTTCTTTGTCAAATTTTCTGCTTCTAGCAATCAAATGTACTGGTCTTTGTTTTAGCCAGAGCCAGCTTTACTTCGGTACAGCCCTAATCTTGATGATACAAAAGAGTTTATAAGTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U585336" ref_strand="+" ref_description="SGN-U585336 Tomato 200607#2 [15 ESTs aligned] (*GB) gi|147805940|emb|CAN61223.1| (e_value=2e-135) hypothetical; (*ATH) AT1G11200.1 (e_value=7e-126) | Symbol: None | expressed protein, contains Pfam profile PF03619: Domain of unknown function | chr1:3753365-3755638 FORWARD | Aliases: T28P6.25; (*SWP) sp|Q3TPR7|T184C_MOUSE (e_value=9e-36) Transmembrane protein 184C OS=Mus musculus GN=Tmem184c; ">
      <seq>attcacaatactctgcacgaatttgttgtcactatcttcattcttgatttattatactgtaagtagtgcaataatttccagaaacatactattgtttgattctttctttgtttttgtgttttcggtgtgattgatgataacttttctaccatcttcttcggtctatgcggatcttgataaatttctggtgccccagaagtcgaaagggatatggatattttttgtatttattcaatttgctgtgtattggtttggtttggttttttgtttttcaagaaaacattctattttgattcctcaattgtaaaatctgtatttttaactaaaagttcaatatgtaccttgaatcttgatttaaaatcaaattcttgttatatatccggttccgtagaagtcaaatggatatgggtgttttttgtatttattgaatttgcgatgtattggtttgggttgtattttgtttttcaagaaaacatcttattttgattcccccgaatgtaaaatctgtatctttaactaaaaattcaacatgccccttgaatcttgattttaaatcaaattggtggatagatatcaagctcaagttttctcaaatttgatattctgttgaagagttgtatgttggtaaattttgtgtgtggttctctgaccttgataaaattgagaattggtttgcacgtttagttgaaaagtgcaggcagttgaaaaattggtgaacaccagtataaaggtctttggtatttgatttgcaggaggagctttgtgttgtgttcttgcaaggcttggtaaaatatggactttgctagtatggaccgtgcacaactcactatggtgggatcaggattttctgctttgctttcgatgcatttcacgatacagctcttgtcacaacacctcttcttctggaaaaacccaaaggagcaaaaggcaataatcatgattatatgtatggctcccctttatgccattgactcgtttgtgggtttgttagatattcgtggaagcaaaacatttttcatgtttctagactcagttaaagaatgctatgaggctgtggcaattgccaaatttttggctttgatgtatagttatttgaatatatccatcagcaaaaacattgtgcctgatgaaatcaaggggagggaaattcatcattcctttccgatgactctatttcagcctcgcactgctcacttagatcaccggacactgaaacttctcaagcattggacatggcagtttgtcattatccgtccagcatgctctatcttgatgatcacgttgcagattcttgggttgtatccgaattggctcagctggacgtttaccatcattctcaatatttcattctcagtggccatgtactccttggttgttttctaccatgttttctcaaaggaactgcagccacacaaaccactttcaaagttcatctgcattaaagggatagttttcttcagcttttggcaggggttgctggttaaaattctagtctcgtggggaattatcaaatctcaccatttttggttggatgtggagcaccttcaggaagccattcagaatgttttaatttgtgtggagatggttttcttttctgttatgcagcaatatgcataccacgtggctccttacagtggtgatgtcgaagcaaagttgaaactgaaaaaggatgactaagtcgatgcacaagacgttggtgtgaatagacacttttcctctgtgatcttgcatttaccaccagtcgccgtgtgtaatgcaagtttttattgttgtgtaacctgttgatacggctcaggaaggtcttaagataactaattttcgcgtgtgttagcaaagaaggaaatttctatcatttcctctgataaccagtttttactcttttgtggttagacttcttgtagttatatcagtaatttttcttcatgagaggctggtgtccctgccggcacctgcaacaagcttgattgcgactttgtaagtaatcattttcttaattatcttgagaatatcatgactatgtgaatgctctaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="+" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="126235" stop="131290"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126535" g_stop="127590" g_length="1056"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1056" r_length="1056" r_score="0.999"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="127591" i_stop="127712" i_length="122">
            <donor d_prob="0.409" d_score="1.00"/>
            <acceptor a_prob="0.546" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="127713" g_stop="127835" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1057" r_stop="1179" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="127836" i_stop="128498" i_length="663">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="128499" g_stop="128789" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1180" r_stop="1470" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="128790" i_stop="130429" i_length="1640">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="130430" g_stop="130991" g_length="562"/>
          <reference_exon_boundary r_type="cDNA" r_start="1471" r_stop="2032" r_length="562" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="+" ref_id="SGN-U585336" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2032</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U585336" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126535" e_stop="127590"/>
          <exon e_start="127713" e_stop="127835"/>
          <exon e_start="128499" e_stop="128789"/>
          <exon e_start="130430" e_stop="130991"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCACAATACTCTGCACGAATTTGTTGTCACTATCTTCATTCTTGATTTATTATACTGTAAGTAGTGCAATAATTTCCAGAAACATACTATTGTTTGATTCTTTCTTTGTTTTTGTGTTTTCGGTGTGATTGATGATAACTTTTCTACCATCTTCTTCGGTCTATGCGGATCTTGATAAATTTCTGGTGCCCCAGAAGTCAAAAGGGATATGGATATTTTTTGTATTTATTCAATTTGCTGTGTATTGGTTTGGTTTGGTTTTTTGTTTTTCAAGAAAACATTCTATTTTGATTCCTCAATTGTAAAATCTGTATTTTTAACTAAAAGTTCAATATGTACCTTGAATCTTGATTTAAAATCAAATTCTTGTTATATATCCGGTTCCGTAGAAGTCAAATGGATATGGGTGTTTTTTGTATTTATTGAATTTGCGATGTATTGGTTTGGGTTGTATTTTGTTTTTCAAGAAAACATCTTATTTTGATTCCCCCGAATGTAAAATCTGTATCTTTAACTAAAAATTCAACATGCCCCTTGAATCTTGATTTTAAATCAAATTGGTGGATAGATATCAAGCTCAAGTTTTCTCAAATTTGATATTCTGTTGAAGAGTTGTATGTTGGTAAATTTTGTGTGTGGTTCTCTGACCTTGATAAAATTGAGAATTGGTTTGCACGTTTAGTTGAAAAGTGCAGGCAGTTGAAAAATTGGTGAACACCAGTATAAAGGTCTTTGGTATTTGATTTGCAGGAGGAGCTTTGTGTTGTGTTCTTGCAAGGCTTGGTAAAATATGGACTTTGCTAGTATGGACCGTGCACAACTCACTATGGTGGGATCAGGATTTTCTGCTTTGCTTTCGATGCATTTCACGATACAGCTCTTGTCACAACACCTCTTCTTCTGGAAAAACCCAAAGGAGCAAAAGGCAATAATCATGATTATATGTATGGCTCCCCTTTATGCCATTGACTCGTTTGTGGGTTTGTTAGATATTCGTGGAAGCAAAACATTTTTCATGTTTCTAGACTCAGTTAAAGAATGCTATGAGGCTGTGGTAAGTTGCTACCGTGTGATTGACATGCCTTTGTTAATGGCGCATACGCTGTCTAATCGTATGCTTTCTAGTTTGACAGAAAAAATAAAGCAAAACATGTTTCATTTGATGTCTTTTTTCAGGCAATTGCCAAATTTTTGGCTTTGATGTATAGTTATTTGAATATATCCATCAGCAAAAACATTGTGCCTGATGAAATCAAGGGGAGGGAAATTCATCATTCCTTTCCGATGACTCTATTTCAGGTGTGATTATACTTATGTTTAGCTTTCCTCTCAATATGTGCCAGATGATTATGCATTCAATGTATTTATAACTGATATCAAAATTAGTCTCCCTACCCCACAAAGGTAGGGTAAGGTTTGTGTACATCCTACCCCCTCCCCAAACCCCACTTGTGGGATTACGCTAGGTATGTTGTTGTAACCATTGCGTTTGAATCTAACCACTATTGGACTTTCCCCCTTTAGTGTTTACTGTGTGATAATATCATTTTGAAGAACTTTAGGGGCAAGGGGAAGTCTATCCCCCAGTATATTTCTTTTTATTCTGAAGCACATGGCTTCTAGTCGTCTAAGATAGACAACCAAGTTATTTGAGTTATTACCTAATGTAACCAATTAATTATAATGACTCTATATCCTAAAGAAATTATATTAATCAGATCCAGTCTAAGTGCAGATATAAACTGCTTGCTCTTTCATATCCGGATGACTTGGAGGCTTGGCTTGCTAACACTTACATAAGTTTTCTTGTAATCTGGGTGATGTGAGATATTAGGTTGAAGTTTGTCAGTTGTTTAATTGAGCTTATGCCTTTCTTACTCAATTTCACTAGAGTGATTGATAAAGTAGTATTAGAATGGTGTATTTTAACCATGCATCTAATGTTCTTCCTGCCAATTGCAGCCTCGCACTGCTCACTTAGATCACCGGACACTGAAACTTCTCAAGCATTGGACATGGCAGTTTGTCATTATCCGTCCAGCATGCTCTATCTTGATGATCACGTTGCAGATTCTTGGGTTGTATCCGAATTGGCTCAGCTGGACGTTTACCATCATTCTCAATATTTCATTCTCAGTGGCCATGTACTCCTTGGTTGTTTTCTACCATGTTTTCTCAAAGGAACTGCAGCCACACAAACCACTTTCAAAGTTCATCTGCATTAAAGGGATAGTTTTCTTCAGCTTTTGGCAGGTAGAGACTCCAACTCATCTCCTCTTACCCCCCCCCCCCCCCCAAAATCTAGAAATAAAATTAATCCTTATCCGTCTCTTGAAGTTTTGGTCAAGGTAAGTGAATGCAACTATTTGTTTTACATATGTGATAATTATTTATGCTAAGATCGACATCCTGTCAGCGATGGCTTTCTTTGCTTTTCACTTTTTAAAGCGTTAATTGAAAGAAAGGATGAAAATATTTGTAATCTATAGAGGCAGGCAGGCAGCATAAGGTTATAGTAGCCCTACTCCCAAGGGCATGATTGACTGGTTGAGGTGTAAGAGTAGCGAGGTTTGAATACCCAGTACGAAGCGTAAAACCAAATCCAAAATATGTCAAGTCTTGCAATTCATAACTAGTTATAGAAGTCCCTTAATGAGTTTCTCGTTACATGTACTGAAATGGAGCCAAGCCTTTAAGGGACTTCTATTACTAATTATAAATCAAAAGACTTGACTTATTTTAGATTTGGTTTTACCTACGTGTAAGTTTCTGCTAATTTTGACCAACAATCAATACTTATTAAGTTCCTCTGATGCTGTTTCCTCACTGCGTCTTTGTGGGAGTGGTATTGGGCAGGAGGCACAGATTTTGCTTATTTGCAGGGATGGACTTCATTTGGGTTTTGCCTCATGCCAAACCTTTTACTGTTATCCTCTACATCTGTGTGTAAACCTGTAATGGAACCAAAACACACCAAGGGACACTGAACTATCTATGTACTTCTAGGTTTATCTGTAGCTTGGGAAAATGATTTCTATATGGAGGACTCGGTTTCATTATTTCATTATTTAGACAAACAATATGTAAAAATCTGTGTTGCTCGGACTCTTCAAAAATGTTGCGCATGTCGAATTCTCCAAAAGTAGTGTATTTTTGGTAATGTGACGCGGGTGCAACATCGAAAGTGAATAGTCCATGCAACTTAGGTCAGGATGATTGAGACATAGAAGAGTGCACAGATGGGTTCTGCGGTTGAGCTCACATTTTATCTGGCCAAACAAGTGAAAATTAAAGGTCTTTAATATGTCTGCCTCCAACCTCCTCTAAAAGGTTGTCATTAGGAGTAGATAGCTGTTAATCTCTTACAATAATCTCCTCTGAAGTTTGATTGGTGGATGGATATCCATTGTGTGAGTTTGAGGCATGGAATCACTGCAATGAACTGATCATAGGATAATATAAGTGAATCCTGTTAGTTGCTGCAGGGAAACGTGATGTAAAGGTTAGCCTCATGTCACGAGTTCAAACCCTGACGCAGACCAACGGCAAGGTATTTAAGTGGAGAAAGGTCTAGAGCAGATCCATTATCCACTGAGATTCAAATCACGAGCCACTGACTCTCGGGATTTCTAGGTTATAAAAAAAATGGTGTGTCCTGCTAGCCAACAATCATCATCAAGCAAAGGATACAAACTACCACCACTAAAATATTGAATCCTCTTGACTTGCATGCCATTACTTTTGAAATTCTTTCAACTTCTCAAAAAGGAGGTATTGGTTTCTTTGTTATGTTGTTTCTGTGAGGAAGCCTCTCTCCGTTCGATGCTTTGCTTGACTGAGATATGTTTTTGCCACCACTGGTGCAATAAACTATTCATCTCTGAATTTTGCAGGGGTTGCTGGTTAAAATTCTAGTCTCGTGGGGAATTATCAAATCTCACCATTTTTGGTTGGATGTGGAGCACCTTCAGGAAGCCATTCAGAATGTTTTAATTTGTGTGGAGATGGTTTTCTTTTCTGTTATGCAGCAATATGCATACCACGTGGCTCCTTACAGTGGTGATGTCGAAGCAAAGTTGAAACTGAAAAAGGATGACTAAGTCGATGCACAAGACGTTGGTGTGAATAGACACTTTTCCTCTGTGATCTTGCATTTACCACCAGTCGCCGTGTGTAATGCAAGTTTTTATTGTTGTGTAACCTGTTGATACGGCTCAGGAAGGTCTTAAGATAACTAATTTTCGCGTGTGTTAGCAAAGAAGGAAATTTCTATCATTTCCTCTGATAACCAGTTTTTACTCTTTTGTGGTTAGACTTCTTGTAGTTATATCAGTAATTTTTCTTCATGAGAGGCTGGTGTCCCTGCCGGCACCTGCAACAAGCTTGATTGCGACTTTGTAAGTAATCATTTTCTTAATTATCTTGAGAATATCATGACTATGTGAATGCTCTAAT</genome_strand>
        <mrna_strand>ATTCACAATACTCTGCACGAATTTGTTGTCACTATCTTCATTCTTGATTTATTATACTGTAAGTAGTGCAATAATTTCCAGAAACATACTATTGTTTGATTCTTTCTTTGTTTTTGTGTTTTCGGTGTGATTGATGATAACTTTTCTACCATCTTCTTCGGTCTATGCGGATCTTGATAAATTTCTGGTGCCCCAGAAGTCGAAAGGGATATGGATATTTTTTGTATTTATTCAATTTGCTGTGTATTGGTTTGGTTTGGTTTTTTGTTTTTCAAGAAAACATTCTATTTTGATTCCTCAATTGTAAAATCTGTATTTTTAACTAAAAGTTCAATATGTACCTTGAATCTTGATTTAAAATCAAATTCTTGTTATATATCCGGTTCCGTAGAAGTCAAATGGATATGGGTGTTTTTTGTATTTATTGAATTTGCGATGTATTGGTTTGGGTTGTATTTTGTTTTTCAAGAAAACATCTTATTTTGATTCCCCCGAATGTAAAATCTGTATCTTTAACTAAAAATTCAACATGCCCCTTGAATCTTGATTTTAAATCAAATTGGTGGATAGATATCAAGCTCAAGTTTTCTCAAATTTGATATTCTGTTGAAGAGTTGTATGTTGGTAAATTTTGTGTGTGGTTCTCTGACCTTGATAAAATTGAGAATTGGTTTGCACGTTTAGTTGAAAAGTGCAGGCAGTTGAAAAATTGGTGAACACCAGTATAAAGGTCTTTGGTATTTGATTTGCAGGAGGAGCTTTGTGTTGTGTTCTTGCAAGGCTTGGTAAAATATGGACTTTGCTAGTATGGACCGTGCACAACTCACTATGGTGGGATCAGGATTTTCTGCTTTGCTTTCGATGCATTTCACGATACAGCTCTTGTCACAACACCTCTTCTTCTGGAAAAACCCAAAGGAGCAAAAGGCAATAATCATGATTATATGTATGGCTCCCCTTTATGCCATTGACTCGTTTGTGGGTTTGTTAGATATTCGTGGAAGCAAAACATTTTTCATGTTTCTAGACTCAGTTAAAGAATGCTATGAGGCTGTG..........................................................................................................................GCAATTGCCAAATTTTTGGCTTTGATGTATAGTTATTTGAATATATCCATCAGCAAAAACATTGTGCCTGATGAAATCAAGGGGAGGGAAATTCATCATTCCTTTCCGATGACTCTATTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCGCACTGCTCACTTAGATCACCGGACACTGAAACTTCTCAAGCATTGGACATGGCAGTTTGTCATTATCCGTCCAGCATGCTCTATCTTGATGATCACGTTGCAGATTCTTGGGTTGTATCCGAATTGGCTCAGCTGGACGTTTACCATCATTCTCAATATTTCATTCTCAGTGGCCATGTACTCCTTGGTTGTTTTCTACCATGTTTTCTCAAAGGAACTGCAGCCACACAAACCACTTTCAAAGTTCATCTGCATTAAAGGGATAGTTTTCTTCAGCTTTTGGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTTGCTGGTTAAAATTCTAGTCTCGTGGGGAATTATCAAATCTCACCATTTTTGGTTGGATGTGGAGCACCTTCAGGAAGCCATTCAGAATGTTTTAATTTGTGTGGAGATGGTTTTCTTTTCTGTTATGCAGCAATATGCATACCACGTGGCTCCTTACAGTGGTGATGTCGAAGCAAAGTTGAAACTGAAAAAGGATGACTAAGTCGATGCACAAGACGTTGGTGTGAATAGACACTTTTCCTCTGTGATCTTGCATTTACCACCAGTCGCCGTGTGTAATGCAAGTTTTTATTGTTGTGTAACCTGTTGATACGGCTCAGGAAGGTCTTAAGATAACTAATTTTCGCGTGTGTTAGCAAAGAAGGAAATTTCTATCATTTCCTCTGATAACCAGTTTTTACTCTTTTGTGGTTAGACTTCTTGTAGTTATATCAGTAATTTTTCTTCATGAGAGGCTGGTGTCCCTGCCGGCACCTGCAACAAGCTTGATTGCGACTTTGTAAGTAATCATTTTCTTAATTATCTTGAGAATATCATGACTATGTGAATGCTCTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U571428" ref_strand="-" ref_description="SGN-U571428 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|30681779|ref|NP_172528.2| (e_value=7e-116) transducin / WD-40 repeat protein family [Arabidopsis thaliana]; (*ATH) AT1G10580.1 (e_value=5e-118)  Symbol: None | transducin family protein / WD-40 repeat family protein, similar to splicing factor hPRP17 (gi:3283220); contains 7 WD-40 repeats (PF00400);similar to ESTs emb:F15435 and dbj:AUO62661 | chr1:3491282-3493738 REVERSE | Aliases: T10O24.2... ; (*SWP) sp|O60508|PRP17_HUMAN (e_value=6e-112) Pre-mRNA-processing factor 17 OS=Homo sapiens GN=CDC40; ">
      <seq>ggtttttccctaagcatggtcatttgattttgtcagctgggatggatacaaaggtgaaaatttgggatgtttacaattccggtaaatgtatgaggacttacatggggcatacaaaggcagtgagggatatttggtttagcaatgacgggacgaagtttttgacagctggatatgataagtacattaagtattgggatacagaaacaggacaagtaattcaaacgttcacgacgggtaagataccctatgtggtgaggcttaatcctgatgaagataagcagaatgtacttttggctggtatgagtgataagaagattgtgcagtgggatataaacagtggacagattacacaagagtacgatcaacatctgggggcagttaatacaattacctttgtggataataacagaaggtttgtgacctctagtgatgataaatcactacgtgtttgggaatatggtattccggttgttatcaagtatataagtgaaccccatatgcattccatgccatctatttcgccccatccaaatgggaattggattgcagcacaaagtttggataaccagattcttatttacagtacgcgagagagatttcagctgaataaaaagaaaagatttgctggacacattgtcgctggttatgccctgccaggtcaatttctcacctgatggacggtttgtcttctcaggagatggtgaaggcagatgctggttttgggattggaaatcgtgtaaggtcttcagaactctcaagtgtcatgatggggtctgtattggtgcagagtggcatcctctggaacaaagtaaagttgctacttgtggctgggatggtttgatcaaatactgggactagtttttgagcagccatttttgtctccatttactttgaggacaacttgttcaacatgggttggctagaggaatcaagactcttatatgcagtgggtggtcaactcatttgggacacgttggctggaaaaaccaagctatgaatgcattttttagtcaatgctagtctttacctcagtaaaacaggttttctcagatggttttctttggttgaggttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="-" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="135536" stop="131563"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="135236" g_stop="134387" g_length="850"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="851" r_length="851" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="134386" i_stop="132085" i_length="2302">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132084" g_stop="131862" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="852" r_stop="1074" r_length="223" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="-" ref_id="SGN-U571428" ref_strand="-">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1073</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U571428" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="135236" e_stop="134387"/>
          <exon e_start="132084" e_stop="131862"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTTTTCCCTAAGCATGGTCATTTGATTTTGTCAGCTGGGATGGATACAAAGGTGAAAATTTGGGATGTTTACAATTCCGGTAAATGTATGAGGACTTACATGGGGCATACAAAGGCAGTGAGGGATATTTGGTTTAGCAATGACGGGACGAAGTTTTTGACAGCTGGATATGATAAGTACATTAAGTATTGGGATACAGAAACAGGACAAGTAATTCAAACGTTCACGACGGGTAAGATACCCTATGTGGTGAGGCTTAATCCTGATGAAGATAAGCAGAATGTACTTTTGGCTGGTATGAGTGATAAGAAGATTGTGCAGTGGGATATAAACAGTGGACAGATTACACAAGAGTACGATCAACATCTGGGGGCAGTTAATACAATTACCTTTGTGGATAATAACAGAAGGTTTGTGACCTCTAGTGATGATAAATCACTACGTGTTTGGGAATATGGTATTCCGGTTGTTATCAAGTATATAAGTGAACCCCATATGCATTCCATGCCATCTATTTCGCCCCATCCAAATGGGAATTGGATTGCAGCACAAAGTTTGGATAACCAGATTCTTATTTACAGTACGCGAGAGAGATTTCAGCTGAATAAAAAGAAAAGATTTGCTGGACACATTGTCGCTGGTTATG-CCTGCCAGGTCAATTTCTCACCTGATGGACGGTTTGTCTTCTCAGGAGATGGTGAAGGCAGATGCTGGTTTTGGGATTGGAAATCGTGTAAGGTCTTCAGAACTCTCAAGTGTCATGATGGGGTCTGTATTGGTGCAGAGTGGCATCCTCTGGAACAAAGTAAAGTTGCTACTTGTGGCTGGGATGGTTTGATCAAATACTGGTAAGCTTTATGATCCTTGCTTTAGTAATTATGTTTATGTAGGTTAAACTTTTATTGCTCTGTCCCATCGTAGAATTTAGTTGTTAATGTAGTCATGACACGGATAGTGAAAAACGCTCTCGTTGTATATCCACATATGCGATTCCATATTTCAGATTAAATTAGCTTTAGTGTGACCTGAGACTTATGTGTTGATTAGAACTGCCACTGAATCTGTCACACCTACCTTGATCCACGGATGAACTACTCATTACCTATTTCCTCCAAAAAAAAAAGAAAAAGAAGAAGCCCACAACAACAAAAAAGAGTTTTAGACATCTAGCCTTTAACACGTATATGAGAGTGTAGTGACTCCTTCAAAACATTCTAAATACACCAAAAGATGCATGGTGGAACCATTTGCCGCATCATCGTCACCGATTGCCAACTCTCCAGAGGCCCCTGGTAGCACAAGCTTCCTTATCAGTGTAGGGCATTACTCAACTAACCCCCAAAAAATTCAAAAACATACTCCAGATGTCTTTGGCAACTTGATAGTGAAGTAGAAGGTGGCTGATTCTTTCAGATTCTTGGGTAGCACATACCACCTGTTGCAGAGCACAATCCTCTTTCAGTGAGATATTTTTGGGATAGACAGGCTTCTAAAATAGCTAACTAGCTGAAACAGGCTATCTTTGTTGGATTTTTCACCTTCCAAACTTGTTTCCTAAAGACAATACTTCAGTGATACCACTACTGCTCCAAAGATTAGTATAGCATGATTTTTGATTGAAAAAATACCATTTTTACGACAACTGCATGCCATTACATCTTTCAGAAGAAAATGGAGAATCCATGTCAACTATCTCATTTTCCTCCTGGTCTAGGATATTCCTTCTAAATGTTTCCTTGCCTACCGTTTATGATTGATGCTTGGGGCTGTTCAGTTAATTGGTAGAGTCCTGGAAAATTTTTCTGCAAAATGCTGTTCCCAGCCATTTATCGTCCCAAAATTATATAAATTCTCCATTCTCAACCATGAAATAAGTGTTTCTACTGAAGACTTTCCCCAATTTGATTGTGTATGTTGTGATATGAAGTGTTAGGGACTTCGGTATGCCAGTGATTTAGCTCTCTGTGTTTACCTTAATAATCTGCCTCCAAAGTGATTATTCTTCACGTCACACATTTTTTAACTTTGTACCTTTCTTGCATTGCATATATATTGTATTTGTGAATTAGTTTTTCACGTTGCATATAGTGTCTCTCTTCATTTGCGTCTATCTTCATGAAGATGTGCTCTTGAAGCCTGATCTTGGTGCTTTTCTGCAATTTTTTGTTACAGCATTTGCACTTCGTTTTGTGACTTGATGAGCTTGTTTTTGAATCAAGAGCAGAGATGAATCTATTGAGAATAGAAAGGGAAAAAATGGAAAAGTGAATTTTGTGGATTTTTTCACTGACTGGGAAAAATATGAACTTCGTGGATTTTTTCTTCTTTTTTCAATGCCTGCTGTCATAGAAGGGGGAATGAAGGAGGGGGGAGGGGGGAGGTATGCTAGGGAAGAAACTAGTAGCACAAGGTCCAGGAAGTAACAATCTGCCTCATTGCTTGATTGTCTGCCATTGCAACTAAAACATAAAAGACTTTGAATTAGGATTTTCAAATCCTAAAATGACAACTGCAACTTAATCCAATTTCAAAAAGAAAAAAACATCATACCTTTAATGGATCATGTTAAATTCATGACTTCTGAAAGACAAAAAGAACCAAATTTTAAGGAAGCATCTTCCCTGACTTGTCACGGATTTTTTTAAACTTCCACTGCAATTTGAAGTGAAAGGACCCTTCTAAAGTTATGTTTATGAGGTCATCTGTCGGTTTCTGTGTCTCTTCTTGGCAATTCCGTGGGAGATTGGTGCAGTTCATCTTCCAATTAATGTTTTTGAGACTTCTGTCAGTTTCCGTAAATGTATCCTTGTCAATCCCTTGAGAGATGATAGAGTGTAACTTACTACCAACAAGAGAGGGTTAAAGCACTTTCACTCGTGCTGTTTTCTGTCATTAAAATATCTGTTATTGGGGTGAATGGCCTCTATTTTGGGGTAGGGGTTCTGTTATCAGTAGATAGATTTCTCATCCAGAATATCAATTAGGTCTATCCTTCTCTTGCTCTGGAGGATAACCATATTTTGAGTTCGCTTCTTAGTTCTTATTGTGTTGCCTCTTGTTTGTACACGTGTGCTTGTATTTTGAGACAGATTCACTTTTCTTATTCCTGGTGTTCAACAAACATGCTAACCTCATCTCTGGTGTTTTCAGGGACTAGTTTTTGAGCAGCCATTTTTGTCTCCATTTACTTTGAGGACAACTTGTTCAACATGGGTTGGCTAGAGGAATCAAGACTCTTATATGCAGTGGGTGGTCAACTCATTTGGGACACGTTGGCTGGAAAAACCAAGCTATGAATGCATTTTTTAGTCAATGCTAGTCTTTACCTCAGTAAAACAGGTTTTCTCAGATGGTTTTCTTTGGTTGAGGTTGT</genome_strand>
        <mrna_strand>GGTTTTTCCCTAAGCATGGTCATTTGATTTTGTCAGCTGGGATGGATACAAAGGTGAAAATTTGGGATGTTTACAATTCCGGTAAATGTATGAGGACTTACATGGGGCATACAAAGGCAGTGAGGGATATTTGGTTTAGCAATGACGGGACGAAGTTTTTGACAGCTGGATATGATAAGTACATTAAGTATTGGGATACAGAAACAGGACAAGTAATTCAAACGTTCACGACGGGTAAGATACCCTATGTGGTGAGGCTTAATCCTGATGAAGATAAGCAGAATGTACTTTTGGCTGGTATGAGTGATAAGAAGATTGTGCAGTGGGATATAAACAGTGGACAGATTACACAAGAGTACGATCAACATCTGGGGGCAGTTAATACAATTACCTTTGTGGATAATAACAGAAGGTTTGTGACCTCTAGTGATGATAAATCACTACGTGTTTGGGAATATGGTATTCCGGTTGTTATCAAGTATATAAGTGAACCCCATATGCATTCCATGCCATCTATTTCGCCCCATCCAAATGGGAATTGGATTGCAGCACAAAGTTTGGATAACCAGATTCTTATTTACAGTACGCGAGAGAGATTTCAGCTGAATAAAAAGAAAAGATTTGCTGGACACATTGTCGCTGGTTATGCCCTGCCAGGTCAATTTCTCACCTGATGGACGGTTTGTCTTCTCAGGAGATGGTGAAGGCAGATGCTGGTTTTGGGATTGGAAATCGTGTAAGGTCTTCAGAACTCTCAAGTGTCATGATGGGGTCTGTATTGGTGCAGAGTGGCATCCTCTGGAACAAAGTAAAGTTGCTACTTGTGGCTGGGATGGTTTGATCAAATACTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACTAGTTTTTGAGCAGCCATTTTTGTCTCCATTTACTTTGAGGACAACTTGTTCAACATGGGTTGGCTAGAGGAATCAAGACTCTTATATGCAGTGGGTGGTCAACTCATTTGGGACACGTTGGCTGGAAAAACCAAGCTATGAATGCATTTTTTAGTCAATGCTAGTCTTTACCTCAGTAAAACAGGTTTTCTCAGATGGTTTTCTTTGGTTGAGGTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U585855" ref_strand="+" ref_description="SGN-U585855 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|5091552|gb|AAD39581.1|AC007067_21 (e_value=5e-56) T10O24.21; (*ATH) AT1G10580.1 (e_value=4e-58)  Symbol: None | transducin family protein / WD-40 repeat family protein, similar to splicing factor hPRP17 (gi:3283220); contains 7 WD-40 repeats (PF00400);similar to ESTs emb:F15435 and dbj:AUO62661 | chr1:3491282-3493738 REVERSE | Aliases: T10O24.2... ; (*SWP) sp|Q9DC48|PRP17_MOUSE (e_value=2e-12) Pre-mRNA-processing factor 17 OS=Mus musculus GN=Cdc40; ">
      <seq>aaaattaggtttctaatcaaaatataaagctttcgccatttttcatagtttgtgcgtatcccatggatcttttacaatcttcatacgaggatgaatcgccggattcttccccaatacgcatgcttccttctaaatccgccgcccctaaagtcgacgacaccatgctagccctaacagtcgccggcgaagctgccagagctcaatccaaaccccttgacccgacccagcacgttgttggattcaacccgacgtacgaacaactatgggcaccaatttgtggtccagctcacccgtacgcaaaggacgggttagctcaaggactcagaaatcacaagttagggttcgtagaggacgcgtctattgagccctttgtattcgatgagcagtacaatacttttcagaagtatgggtacgctgttgatccctctgaaaatagctacatcggtgatttggaaaaaatgaaggaatgtgatgcaatttctgtgtataacataccacagcatgaacagaagaagaggaagttagagaagaagaaggaaaaaatggaggaggagggtgatgagcaggatgtggatatgacggaagttgaaaatccgtccaccgacacatggttgatgaagaacaggaagagtccatgggctggaaagaaagaagggttgcaagtggaattatctgaggagcagaaaaaatatgctgaagagtatgctaanaanannnngaagaaagagntggtganaaagatanggnggagcctatggttgaaaagagcacatttcanggtnaagaggaaaaggatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0090O01-CLZi5/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0090O01.2" temp_strand="-" temp_description="C02HBa0090O01.2  AC215380.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0090O01 sequenced_by:kribb upload_account_name:korea">
        <position start="136454" stop="135056"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="136154" g_stop="135356" g_length="799"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="798" r_length="798" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0090O01.2" gen_strand="-" ref_id="SGN-U585855" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>799</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0090O01.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U585855" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="136154" e_stop="135356"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATTAGGTTTCTAATCAAAATATAAAGCTTTCGCCATTTTTCATAGTTTGTGCGTATCCCATGGATCTTTTACAATCTTCATACGAGGATGAATCGCCGGATTCTTCCCCAATACGCATGCTTCCTTCTAAATCCGCCGCCCCTAAAGTCGACGACACCATGCTAGCCCTAACAGTCGCCGGCGAAGCTGCCAGAGCTCAATCCAAACCCCTTGACCCGACCCAGCACGTTGTTGGATTCAACCCGACGTACGAACAACTATGGGCACCAATTTGTGGTCCAGCTCACCCGTACGCAAAGGACGGGTTAGCTCAAGGACTCAGAAATCACAAGTTAGGGTTCGTAGAGGACGCGTCTATTGAGCCCTTTGTATTCGATGAGCAGTACAATACTTTTCAGAAGTATGGGTACGCTGTTGATCCCTCTGAAAATAGCTACATCGGTGATTTGGAAAAAATGAAGGAATGTGATGCAATTTCTGTGTATAACATACCACAGCATGAACAGAAGAAGAGGAAGTTAGAGAAGAAGAAGGAAAAAATGGAGGAGGAGGGTGATGAGCAGGATGTGGATATGACGGAAGTTGAAAATCCGTCCACCGACACATGGTTGATGAAGAACAGGAAGAGTCCATGGGCTGGAAAGAAAGAAGGGTTGCAAGTGGAATTATCTGAGGAGCAGAAAAAATATGCTGAAGAGTATGCTAAGAAGAAGGGTGAAGAAAGAGGTGGTGATAAAGATAAGGCGGAGCCTATGGTTGAAAAGAGCACATTTCATGGTAAAGAGGAAAAGGATTA</genome_strand>
        <mrna_strand>AAAATTAGGTTTCTAATCAAAATATAAAGCTTTCGCCATTTTTCATAGTTTGTGCGTATCCCATGGATCTTTTACAATCTTCATACGAGGATGAATCGCCGGATTCTTCCCCAATACGCATGCTTCCTTCTAAATCCGCCGCCCCTAAAGTCGACGACACCATGCTAGCCCTAACAGTCGCCGGCGAAGCTGCCAGAGCTCAATCCAAACCCCTTGACCCGACCCAGCACGTTGTTGGATTCAACCCGACGTACGAACAACTATGGGCACCAATTTGTGGTCCAGCTCACCCGTACGCAAAGGACGGGTTAGCTCAAGGACTCAGAAATCACAAGTTAGGGTTCGTAGAGGACGCGTCTATTGAGCCCTTTGTATTCGATGAGCAGTACAATACTTTTCAGAAGTATGGGTACGCTGTTGATCCCTCTGAAAATAGCTACATCGGTGATTTGGAAAAAATGAAGGAATGTGATGCAATTTCTGTGTATAACATACCACAGCATGAACAGAAGAAGAGGAAGTTAGAGAAGAAGAAGGAAAAAATGGAGGAGGAGGGTGATGAGCAGGATGTGGATATGACGGAAGTTGAAAATCCGTCCACCGACACATGGTTGATGAAGAACAGGAAGAGTCCATGGGCTGGAAAGAAAGAAGGGTTGCAAGTGGAATTATCTGAGGAGCAGAAAAAATATGCTGAAGAGTATGCTAANAA-NANNNNGAAGAAAGAGNTGGTGANAAAGATANGGNGGAGCCTATGGTTGAAAAGAGCACATTTCANGGTNAAGAGGAAAAGGATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>24</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="978" PGL_stop="2731"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="978" e_stop="1088"/>
            <exon e_start="2136" e_stop="2564"/>
            <exon e_start="2659" e_stop="2731"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.981" acc_prob="0.948" e_score="0.991"/>
          <exon-intron don_prob="0.972" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="978" e_stop="1088" e_length="111"/>
          </exon>
          <intron i_serial="1" don_prob="0.981" acc_prob="0.948">
            <gDNA_intron_boundary i_start="1089" i_stop="2135" i_length="1047"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="2136" e_stop="2564" e_length="429"/>
          </exon>
          <intron i_serial="2" don_prob="0.972" acc_prob="0.993">
            <gDNA_intron_boundary i_start="2565" i_stop="2658" i_length="94"/>
          </intron>
          <exon e_serial="3" e_score="0.986">
            <gDNA_exon_boundary e_start="2659" e_stop="2731" e_length="73"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="978" stop="1088"/>
              <exon start="2136" stop="2564"/>
              <exon start="2659" stop="2731"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U597410" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TATTCCCTGCAGAATGATGTTGGTCCTAAGATCTTTCTTTCTTATGGGATGTATGAAGAACTTGGTAAAGGTGACTCAGTGAACAATCTGCATACCAACATGCGTGACCTA : GTATTCCTTTTGGTTCATATCAGTGAGGTCAAACTGAAAGGTTGGCAGAAGACGAAGATAGGAAAGATGCAGAAAATCTTTGCTGAATCTGATCACAAAGGAATTTCTGGCGATGCACTAAATGTTTCAAGCGAAGGGGATTTCTCCAAATTCTCGCCTGTTGGCGATAGAGGGGATGGTCAGTATGCTGATACGGATTCAAATGCCAATGAAATGTTGGTCGACCCAGAGAGCAGAGTTACTTCCCAGATTGGTGTAGATAACTTGAGTCATGAAGATCTGAATGGTTCCAGTCTAAACAGCTCCGACAGTAGTCATTCTGGAGCTCTTTGGGATGTCTTCCGGAGGCAGGATGTGCCGATGCTTATCGAGTATCTAAGATTTCATTGGAAGAAACACGGAGATTCAGACCATGTAACGGATGATTCT : GTGCCAAGTCCTCTTTACGATGGAATAGTATATCTGAATGAGCATCATAAGAGAAAGTTGAAAGAGTTATTTG</gDNA_template>
            <first_frame> Y  S  L  Q  N  D  V  G  P  K  I  F  L  S  Y  G  M  Y  E  E  L  G  K  G  D  S  V  N  N  L  H  T  N  M  R  D  L  :  V  F  L  L  V  H  I  S  E  V  K  L  K  G  W  Q  K  T  K  I  G  K  M  Q  K  I  F  A  E  S  D  H  K  G  I  S  G  D  A  L  N  V  S  S  E  G  D  F  S  K  F  S  P  V  G  D  R  G  D  G  Q  Y  A  D  T  D  S  N  A  N  E  M  L  V  D  P  E  S  R  V  T  S  Q  I  G  V  D  N  L  S  H  E  D  L  N  G  S  S  L  N  S  S  D  S  S  H  S  G  A  L  W  D  V  F  R  R  Q  D  V  P  M  L  I  E  Y  L  R  F  H  W  K  K  H  G  D  S  D  H  V  T  D  D  S  :  V  P  S  P  L  Y  D  G  I  V  Y  L  N  E  H  H  K  R  K  L  K  E  L  F  </first_frame>
            <second_frame>  I  P  C  R  M  M  L  V  L  R  S  F  F  L  M  G  C  M  K  N  L  V  K  V  T  Q  *  T  I  C  I  P  T  C  V  T  * :   Y  S  F  W  F  I  S  V  R  S  N  *  K  V  G  R  R  R  R  *  E  R  C  R  K  S  L  L  N  L  I  T  K  E  F  L  A  M  H  *  M  F  Q  A  K  G  I  S  P  N  S  R  L  L  A  I  E  G  M  V  S  M  L  I  R  I  Q  M  P  M  K  C  W  S  T  Q  R  A  E  L  L  P  R  L  V  *  I  T  *  V  M  K  I  *  M  V  P  V  *  T  A  P  T  V  V  I  L  E  L  F  G  M  S  S  G  G  R  M  C  R  C  L  S  S  I  *  D  F  I  G  R  N  T  E  I  Q  T  M  *  R  M  I  L :   C  Q  V  L  F  T  M  E  *  Y  I  *  M  S  I  I  R  E  S  *  K  S  Y  L </second_frame>
            <third_frame>   F  P  A  E  *  C  W  S  *  D  L  S  F  L  W  D  V  *  R  T  W  *  R  *  L  S  E  Q  S  A  Y  Q  H  A  *  P   : S  I  P  F  G  S  Y  Q  *  G  Q  T  E  R  L  A  E  D  E  D  R  K  D  A  E  N  L  C  *  I  *  S  Q  R  N  F  W  R  C  T  K  C  F  K  R  R  G  F  L  Q  I  L  A  C  W  R  *  R  G  W  S  V  C  *  Y  G  F  K  C  Q  *  N  V  G  R  P  R  E  Q  S  Y  F  P  D  W  C  R  *  L  E  S  *  R  S  E  W  F  Q  S  K  Q  L  R  Q  *  S  F  W  S  S  L  G  C  L  P  E  A  G  C  A  D  A  Y  R  V  S  K  I  S  L  E  E  T  R  R  F  R  P  C  N  G  *  F   : C  A  K  S  S  L  R  W  N  S  I  S  E  *  A  S  *  E  K  V  E  R  V  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="978" stop="1088"/>
                    <exon start="2136" stop="2564"/>
                    <exon start="2659" stop="2730"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>612</number_coding_nucleotides>
                  <number_encoded_amino_acids>204</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YSLQNDVGPKIFLSYGMYEELGKGDSVNNLHTNMRDLVFLLVHISEVKLKGWQKTKIGKMQKIFAESDHKGISGDALNVSSEGDFSKFSPVGDRGDGQYADTDSNANEMLVDPESRVTSQIGVDNLSHEDLNGSSLNSSDSSHSGALWDVFRRQDVPMLIEYLRFHWKKHGDSDHVTDDSVPSPLYDGIVYLNEHHKRKLKELF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="3162" PGL_stop="4926"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3162" e_stop="3187"/>
            <exon e_start="3798" e_stop="3917"/>
            <exon e_start="4000" e_stop="4070"/>
            <exon e_start="4493" e_stop="4926"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.584" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="3162" e_stop="3187" e_length="26"/>
          </exon>
          <intron i_serial="1" don_prob="0.584" acc_prob="0.984">
            <gDNA_intron_boundary i_start="3188" i_stop="3797" i_length="610"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="3798" e_stop="3917" e_length="120"/>
          </exon>
          <intron i_serial="2" don_prob="0.960" acc_prob="0.998">
            <gDNA_intron_boundary i_start="3918" i_stop="3999" i_length="82"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="4000" e_stop="4070" e_length="71"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="4071" i_stop="4492" i_length="422"/>
          </intron>
          <exon e_serial="4" e_score="0.995">
            <gDNA_exon_boundary e_start="4493" e_stop="4926" e_length="434"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3162" stop="3187"/>
              <exon start="3798" stop="3917"/>
              <exon start="4000" stop="4070"/>
              <exon start="4493" stop="4926"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585918" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTCCTTTCCAAGTGAGGAATCTTCAG : TCCACTGTCCAATTGGGCCTTGATTTTCTTTCTCCAGAAAGCTTAGGTGAGGCTGTTAGAATGGCTGAAGAAATCCGTGGCCTTCCTAATACTCATGATGCGAAGCTGCAAATGTTGGAG : GTGGGAAAGATATCACTTTATGCAGCAAGCTCAGCCATCAAAGAAGTTCAGAAGTTGGTTCTGGATCCTAA : AGTTGGTCCTGAGCTTGGATTTGAGGATCCCAATTTGACCGCATTGGTGTCAGAGAATTTGGAGAAAATGATGAAGAGACGTCAGGTACCTTGAACATAAACCAGTGCAGAGAGGTTTGTATCCGAGTATGTCTGAATTCATATGTACAGAAGAAACAGCAAAACCCCTAGGGAATGTGCATCGGAGTACTTGATTTTGTTCTGCTAAATGCTAGAACGCTCTCAGGGGATGTGCATTGTTACCGCTTACTTTGGTCTCCCATAATCTCATAGGTTGTAGCCTGTGATATCTATCTATCTATTATCTTATGAAGAAATCAACAGCTGTGTGCTCCCATAGTCTTGTAGTAGAAGATATCAATAGGTCTTATTGTAATTGTAATTTCATAGGTGGAATGAAACATCAATTCAAGATATCATTTTTTGATAGATAT</gDNA_template>
            <first_frame> V  L  S  K  *  G  I  F  S :   P  L  S  N  W  A  L  I  F  F  L  Q  K  A  *  V  R  L  L  E  W  L  K  K  S  V  A  F  L  I  L  M  M  R  S  C  K  C  W  R :   W  E  R  Y  H  F  M  Q  Q  A  Q  P  S  K  K  F  R  S  W  F  W  I  L   : K  L  V  L  S  L  D  L  R  I  P  I  *  P  H  W  C  Q  R  I  W  R  K  *  *  R  D  V  R  Y  L  E  H  K  P  V  Q  R  G  L  Y  P  S  M  S  E  F  I  C  T  E  E  T  A  K  P  L  G  N  V  H  R  S  T  *  F  C  S  A  K  C  *  N  A  L  R  G  C  A  L  L  P  L  T  L  V  S  H  N  L  I  G  C  S  L  *  Y  L  S  I  Y  Y  L  M  K  K  S  T  A  V  C  S  H  S  L  V  V  E  D  I  N  R  S  Y  C  N  C  N  F  I  G  G  M  K  H  Q  F  K  I  S  F  F  D  R  Y </first_frame>
            <second_frame>  S  F  P  S  E  E  S  S   : V  H  C  P  I  G  P  *  F  S  F  S  R  K  L  R  *  G  C  *  N  G  *  R  N  P  W  P  S  *  Y  S  *  C  E  A  A  N  V  G   : G  G  K  D  I  T  L  C  S  K  L  S  H  Q  R  S  S  E  V  G  S  G  S  *  :  S  W  S  *  A  W  I  *  G  S  Q  F  D  R  I  G  V  R  E  F  G  E  N  D  E  E  T  S  G  T  L  N  I  N  Q  C  R  E  V  C  I  R  V  C  L  N  S  Y  V  Q  K  K  Q  Q  N  P  *  G  M  C  I  G  V  L  D  F  V  L  L  N  A  R  T  L  S  G  D  V  H  C  Y  R  L  L  W  S  P  I  I  S  *  V  V  A  C  D  I  Y  L  S  I  I  L  *  R  N  Q  Q  L  C  A  P  I  V  L  *  *  K  I  S  I  G  L  I  V  I  V  I  S  *  V  E  *  N  I  N  S  R  Y  H  F  L  I  D   </second_frame>
            <third_frame>   P  F  Q  V  R  N  L  Q  :  S  T  V  Q  L  G  L  D  F  L  S  P  E  S  L  G  E  A  V  R  M  A  E  E  I  R  G  L  P  N  T  H  D  A  K  L  Q  M  L  E  :  V  G  K  I  S  L  Y  A  A  S  S  A  I  K  E  V  Q  K  L  V  L  D  P  K :   V  G  P  E  L  G  F  E  D  P  N  L  T  A  L  V  S  E  N  L  E  K  M  M  K  R  R  Q  V  P  *  T  *  T  S  A  E  R  F  V  S  E  Y  V  *  I  H  M  Y  R  R  N  S  K  T  P  R  E  C  A  S  E  Y  L  I  L  F  C  *  M  L  E  R  S  Q  G  M  C  I  V  T  A  Y  F  G  L  P  *  S  H  R  L  *  P  V  I  S  I  Y  L  L  S  Y  E  E  I  N  S  C  V  L  P  *  S  C  S  R  R  Y  Q  *  V  L  L  *  L  *  F  H  R  W  N  E  T  S  I  Q  D  I  I  F  *  *  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3164" stop="3187"/>
                    <exon start="3798" stop="3917"/>
                    <exon start="4000" stop="4070"/>
                    <exon start="4493" stop="4586"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>306</number_coding_nucleotides>
                  <number_encoded_amino_acids>102</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PFQVRNLQSTVQLGLDFLSPESLGEAVRMAEEIRGLPNTHDAKLQMLEVGKISLYAASSAIKEVQKLVLDPKVGPELGFEDPNLTALVSENLEKMMKRRQVP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="14252" PGL_stop="20806"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14252" e_stop="14524"/>
            <exon e_start="15066" e_stop="15196"/>
            <exon e_start="15874" e_stop="15991"/>
            <exon e_start="19247" e_stop="19473"/>
            <exon e_start="19553" e_stop="19655"/>
            <exon e_start="20766" e_stop="20806"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.990" acc_prob="0.948" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.426" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.787" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.915" e_score="1.000"/>
          <exon-only e_score="0.951"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="14252" e_stop="14524" e_length="273"/>
          </exon>
          <intron i_serial="1" don_prob="0.990" acc_prob="0.948">
            <gDNA_intron_boundary i_start="14525" i_stop="15065" i_length="541"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="15066" e_stop="15196" e_length="131"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.996">
            <gDNA_intron_boundary i_start="15197" i_stop="15873" i_length="677"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="15874" e_stop="15991" e_length="118"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.426">
            <gDNA_intron_boundary i_start="15992" i_stop="19246" i_length="3255"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="19247" e_stop="19473" e_length="227"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.787">
            <gDNA_intron_boundary i_start="19474" i_stop="19552" i_length="79"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="19553" e_stop="19655" e_length="103"/>
          </exon>
          <intron i_serial="5" don_prob="0.987" acc_prob="0.915">
            <gDNA_intron_boundary i_start="19656" i_stop="20765" i_length="1110"/>
          </intron>
          <exon e_serial="6" e_score="0.951">
            <gDNA_exon_boundary e_start="20766" e_stop="20806" e_length="41"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14252" stop="14524"/>
              <exon start="15066" stop="15196"/>
              <exon start="15874" stop="15991"/>
              <exon start="19247" stop="19473"/>
              <exon start="19553" stop="19655"/>
              <exon start="20766" stop="20806"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585372" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTCACAATTTCCATTTCCATTTCTCTTCCCCTTTCCCTTTTTAGCTTTTTCACTTTTCTTCAACAAAATTTGATTCCTAACTTTCTCTGTAGATTTTGCACTCACTCTCCCTTCCTTTCTTCCCCTCTCTGTCATCCACAATCGGAAGTTTTTCTTCTCTCTGTTGACGACGGACGGTGACTTTTGTCGGTGCTTCTTATCTTATGCTTTGTTGTTTTCCGGCGAGTTATCCGATTTGCGGTGCAGAATGGCTAATCGTGGCTACAAATTGC : AGGAATTTGTGGCGCATTCGGGGAATGTAAACTGTTTAAGGTTTGGGAAGAAGACGCGTAGACAGTTTCTCACTGGTGGAGATGATCAGAATGTGAATCTTTGGTCCATTGGTAAACCAACATCCACCACG : AGCCTAAGTGGGCATACGAGTCCAATAGAATCTGTAGCTTTTGACTCAGCAGAGGTTCTAGTGCTTGCTGGAGCTTCATCAGGTGTAATAAAGCTATGGGATCTGGAAGAAACAAAAA : TGGTTCGCACTCTTACGGGACACAGATCATATTGCACTGCCTGTGAATTCCATCCTTTTGGTGAATTTTTTGCATCTGGATCTATGGATACTAATCTTAAGATATGGGATATAAGAAAAAAAGGATGCATCCACACATACAAAGGTCATACTCGAGGAATAAGTACCATACGATTCTCCCCTGATGGCCGCTGGGTGGTTTCTGGCGGATTTGACAATGTTGTGAAG : GTATGGGACCTAACAGCTGGAAAGCTCTTGCACGACTTTAAGTTCCATGAAGGGCACATTCGATCCATAGATTTCCATCCACTTGAGTTTCTTTTGGCAACAG : GTTCAGCTGACCGCACCGTGAACTTTTGGGATTTGGAAACA</gDNA_template>
            <first_frame> F  H  N  F  H  F  H  F  S  S  P  F  P  F  *  L  F  H  F  S  S  T  K  F  D  S  *  L  S  L  *  I  L  H  S  L  S  L  P  F  F  P  S  L  S  S  T  I  G  S  F  S  S  L  C  *  R  R  T  V  T  F  V  G  A  S  Y  L  M  L  C  C  F  P  A  S  Y  P  I  C  G  A  E  W  L  I  V  A  T  N  C  :  R  N  L  W  R  I  R  G  M  *  T  V  *  G  L  G  R  R  R  V  D  S  F  S  L  V  E  M  I  R  M  *  I  F  G  P  L  V  N  Q  H  P  P  R :   A  *  V  G  I  R  V  Q  *  N  L  *  L  L  T  Q  Q  R  F  *  C  L  L  E  L  H  Q  V  *  *  S  Y  G  I  W  K  K  Q  K  :  W  F  A  L  L  R  D  T  D  H  I  A  L  P  V  N  S  I  L  L  V  N  F  L  H  L  D  L  W  I  L  I  L  R  Y  G  I  *  E  K  K  D  A  S  T  H  T  K  V  I  L  E  E  *  V  P  Y  D  S  P  L  M  A  A  G  W  F  L  A  D  L  T  M  L  *  R :   Y  G  T  *  Q  L  E  S  S  C  T  T  L  S  S  M  K  G  T  F  D  P  *  I  S  I  H  L  S  F  F  W  Q  Q  :  V  Q  L  T  A  P  *  T  F  G  I  W  K   </first_frame>
            <second_frame>  F  T  I  S  I  S  I  S  L  P  L  S  L  F  S  F  F  T  F  L  Q  Q  N  L  I  P  N  F  L  C  R  F  C  T  H  S  P  F  L  S  S  P  L  C  H  P  Q  S  E  V  F  L  L  S  V  D  D  G  R  *  L  L  S  V  L  L  I  L  C  F  V  V  F  R  R  V  I  R  F  A  V  Q  N  G  *  S  W  L  Q  I  A :   G  I  C  G  A  F  G  E  C  K  L  F  K  V  W  E  E  D  A  *  T  V  S  H  W  W  R  *  S  E  C  E  S  L  V  H  W  *  T  N  I  H  H   : E  P  K  W  A  Y  E  S  N  R  I  C  S  F  *  L  S  R  G  S  S  A  C  W  S  F  I  R  C  N  K  A  M  G  S  G  R  N  K  N :   G  S  H  S  Y  G  T  Q  I  I  L  H  C  L  *  I  P  S  F  W  *  I  F  C  I  W  I  Y  G  Y  *  S  *  D  M  G  Y  K  K  K  R  M  H  P  H  I  Q  R  S  Y  S  R  N  K  Y  H  T  I  L  P  *  W  P  L  G  G  F  W  R  I  *  Q  C  C  E   : G  M  G  P  N  S  W  K  A  L  A  R  L  *  V  P  *  R  A  H  S  I  H  R  F  P  S  T  *  V  S  F  G  N  R :   F  S  *  P  H  R  E  L  L  G  F  G  N  </second_frame>
            <third_frame>   S  Q  F  P  F  P  F  L  F  P  F  P  F  L  A  F  S  L  F  F  N  K  I  *  F  L  T  F  S  V  D  F  A  L  T  L  P  S  F  L  P  L  S  V  I  H  N  R  K  F  F  F  S  L  L  T  T  D  G  D  F  C  R  C  F  L  S  Y  A  L  L  F  S  G  E  L  S  D  L  R  C  R  M  A  N  R  G  Y  K  L   : Q  E  F  V  A  H  S  G  N  V  N  C  L  R  F  G  K  K  T  R  R  Q  F  L  T  G  G  D  D  Q  N  V  N  L  W  S  I  G  K  P  T  S  T  T  :  S  L  S  G  H  T  S  P  I  E  S  V  A  F  D  S  A  E  V  L  V  L  A  G  A  S  S  G  V  I  K  L  W  D  L  E  E  T  K   : M  V  R  T  L  T  G  H  R  S  Y  C  T  A  C  E  F  H  P  F  G  E  F  F  A  S  G  S  M  D  T  N  L  K  I  W  D  I  R  K  K  G  C  I  H  T  Y  K  G  H  T  R  G  I  S  T  I  R  F  S  P  D  G  R  W  V  V  S  G  G  F  D  N  V  V  K  :  V  W  D  L  T  A  G  K  L  L  H  D  F  K  F  H  E  G  H  I  R  S  I  D  F  H  P  L  E  F  L  L  A  T   : G  S  A  D  R  T  V  N  F  W  D  L  E  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14326" stop="14524"/>
                    <exon start="15066" stop="15196"/>
                    <exon start="15874" stop="15991"/>
                    <exon start="19247" stop="19473"/>
                    <exon start="19553" stop="19655"/>
                    <exon start="20766" stop="20806"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>819</number_coding_nucleotides>
                  <number_encoded_amino_acids>273</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLTFSVDFALTLPSFLPLSVIHNRKFFFSLLTTDGDFCRCFLSYALLFSGELSDLRCRMANRGYKLQEFVAHSGNVNCLRFGKKTRRQFLTGGDDQNVNLWSIGKPTSTTSLSGHTSPIESVAFDSAEVLVLAGASSGVIKLWDLEETKMVRTLTGHRSYCTACEFHPFGEFFASGSMDTNLKIWDIRKKGCIHTYKGHTRGISTIRFSPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVNFWDLET</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="23194" PGL_stop="24698"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23194" e_stop="23324"/>
            <exon e_start="23856" e_stop="23912"/>
            <exon e_start="24019" e_stop="24698"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.989" acc_prob="0.999" e_score="0.992"/>
          <exon-intron don_prob="0.944" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="23194" e_stop="23324" e_length="131"/>
          </exon>
          <intron i_serial="1" don_prob="0.989" acc_prob="0.999">
            <gDNA_intron_boundary i_start="23325" i_stop="23855" i_length="531"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="23856" e_stop="23912" e_length="57"/>
          </exon>
          <intron i_serial="2" don_prob="0.944" acc_prob="0.999">
            <gDNA_intron_boundary i_start="23913" i_stop="24018" i_length="106"/>
          </intron>
          <exon e_serial="3" e_score="0.997">
            <gDNA_exon_boundary e_start="24019" e_stop="24698" e_length="680"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23194" stop="23324"/>
              <exon start="23856" stop="23912"/>
              <exon start="24019" stop="24698"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584973" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TATTAATAGCAGGCTTATGGCAGATAATGATTCCAGAGAACGTTCCGAGGCAAAAGATTCTGCTGGCAAGCATGGTGGAGAAAAGCTAGAGAAAACTTCATTGCAACCACCGCTGAATAGTCGGGAGAACC : GTAATGTGGGTTCAGAAGGTAGGAAAGAGTTGCATCCAGTTAGATTTGTGAATGGAG : TGGCGGTAGTGCGAGGAAGGACGCGCAGTTTGGTTGAGAGGTTTGAGAAAAGAGAAGGGTTGAACATAGATGATGTCCATAAGCTGGATGTGGTGTCTCATTCTAAAACTGAGGAAACAGATGTATCCCCTTTGCCACCTTCTTGTTGTAAAGATGAGGAACTAGAAACCTTTTCCACAAAATTTGAAGAAGAACCAGAAACATCACCTTTGACAGCTTCTCGTTTTAAAACAGAGGAAGCAATGCGCCCCATGCCTCTAGCTCATTCGAAAGTTGAGGAAACAAATTCATCTGCTTTGCCAGCTTCTCAATATGAAGTTGAGGACTTAGAAGCATCCCATAAGCCAGCTTCTAAATCTAAATCTGAGGAAGTAAGAAAAAACCATTTACCAGCTTCTCATTCTGAAGCTGAGAAATTAGAGGCATCCCTTATGCTAGCTTCTCAGTTTAAATACGAGGAAGTTAGAGAATCCCATTTACCAGCTTCTTGTTCTAAAGCTGAGGAATTTGAAGCATCCCCTATCCTAGCTTCACAGGTTAAATCTGAGGATGTAAGGAAGTCTCGTTTGCCAACTTCTCGTTCTAGAACTGGGGAATTAGGAGCATCCTCTATACCAGCTTCACAGCTTAAACCTGAGAATGTAAGAAGATCCCGTTTATCAGCTTCTCGTTCTAAAGCT</gDNA_template>
            <first_frame> Y  *  *  Q  A  Y  G  R  *  *  F  Q  R  T  F  R  G  K  R  F  C  W  Q  A  W  W  R  K  A  R  E  N  F  I  A  T  T  A  E  *  S  G  E  P :   *  C  G  F  R  R  *  E  R  V  A  S  S  *  I  C  E  W  S :   G  G  S  A  R  K  D  A  Q  F  G  *  E  V  *  E  K  R  R  V  E  H  R  *  C  P  *  A  G  C  G  V  S  F  *  N  *  G  N  R  C  I  P  F  A  T  F  L  L  *  R  *  G  T  R  N  L  F  H  K  I  *  R  R  T  R  N  I  T  F  D  S  F  S  F  *  N  R  G  S  N  A  P  H  A  S  S  S  F  E  S  *  G  N  K  F  I  C  F  A  S  F  S  I  *  S  *  G  L  R  S  I  P  *  A  S  F  *  I  *  I  *  G  S  K  K  K  P  F  T  S  F  S  F  *  S  *  E  I  R  G  I  P  Y  A  S  F  S  V  *  I  R  G  S  *  R  I  P  F  T  S  F  L  F  *  S  *  G  I  *  S  I  P  Y  P  S  F  T  G  *  I  *  G  C  K  E  V  S  F  A  N  F  S  F  *  N  W  G  I  R  S  I  L  Y  T  S  F  T  A  *  T  *  E  C  K  K  I  P  F  I  S  F  S  F  *  S  </first_frame>
            <second_frame>  I  N  S  R  L  M  A  D  N  D  S  R  E  R  S  E  A  K  D  S  A  G  K  H  G  G  E  K  L  E  K  T  S  L  Q  P  P  L  N  S  R  E  N   : R  N  V  G  S  E  G  R  K  E  L  H  P  V  R  F  V  N  G   : V  A  V  V  R  G  R  T  R  S  L  V  E  R  F  E  K  R  E  G  L  N  I  D  D  V  H  K  L  D  V  V  S  H  S  K  T  E  E  T  D  V  S  P  L  P  P  S  C  C  K  D  E  E  L  E  T  F  S  T  K  F  E  E  E  P  E  T  S  P  L  T  A  S  R  F  K  T  E  E  A  M  R  P  M  P  L  A  H  S  K  V  E  E  T  N  S  S  A  L  P  A  S  Q  Y  E  V  E  D  L  E  A  S  H  K  P  A  S  K  S  K  S  E  E  V  R  K  N  H  L  P  A  S  H  S  E  A  E  K  L  E  A  S  L  M  L  A  S  Q  F  K  Y  E  E  V  R  E  S  H  L  P  A  S  C  S  K  A  E  E  F  E  A  S  P  I  L  A  S  Q  V  K  S  E  D  V  R  K  S  R  L  P  T  S  R  S  R  T  G  E  L  G  A  S  S  I  P  A  S  Q  L  K  P  E  N  V  R  R  S  R  L  S  A  S  R  S  K  A </second_frame>
            <third_frame>   L  I  A  G  L  W  Q  I  M  I  P  E  N  V  P  R  Q  K  I  L  L  A  S  M  V  E  K  S  *  R  K  L  H  C  N  H  R  *  I  V  G  R  T  :  V  M  W  V  Q  K  V  G  K  S  C  I  Q  L  D  L  *  M  E  :  W  R  *  C  E  E  G  R  A  V  W  L  R  G  L  R  K  E  K  G  *  T  *  M  M  S  I  S  W  M  W  C  L  I  L  K  L  R  K  Q  M  Y  P  L  C  H  L  L  V  V  K  M  R  N  *  K  P  F  P  Q  N  L  K  K  N  Q  K  H  H  L  *  Q  L  L  V  L  K  Q  R  K  Q  C  A  P  C  L  *  L  I  R  K  L  R  K  Q  I  H  L  L  C  Q  L  L  N  M  K  L  R  T  *  K  H  P  I  S  Q  L  L  N  L  N  L  R  K  *  E  K  T  I  Y  Q  L  L  I  L  K  L  R  N  *  R  H  P  L  C  *  L  L  S  L  N  T  R  K  L  E  N  P  I  Y  Q  L  L  V  L  K  L  R  N  L  K  H  P  L  S  *  L  H  R  L  N  L  R  M  *  G  S  L  V  C  Q  L  L  V  L  E  L  G  N  *  E  H  P  L  Y  Q  L  H  S  L  N  L  R  M  *  E  D  P  V  Y  Q  L  L  V  L  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23195" stop="23324"/>
                    <exon start="23856" stop="23912"/>
                    <exon start="24019" stop="24698"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>867</number_coding_nucleotides>
                  <number_encoded_amino_acids>289</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>INSRLMADNDSRERSEAKDSAGKHGGEKLEKTSLQPPLNSRENRNVGSEGRKELHPVRFVNGVAVVRGRTRSLVERFEKREGLNIDDVHKLDVVSHSKTEETDVSPLPPSCCKDEELETFSTKFEEEPETSPLTASRFKTEEAMRPMPLAHSKVEETNSSALPASQYEVEDLEASHKPASKSKSEEVRKNHLPASHSEAEKLEASLMLASQFKYEEVRESHLPASCSKAEEFEASPILASQVKSEDVRKSRLPTSRSRTGELGASSIPASQLKPENVRRSRLSASRSKA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="24724" PGL_stop="28110"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24724" e_stop="24902"/>
            <exon e_start="25414" e_stop="25539"/>
            <exon e_start="25794" e_stop="25868"/>
            <exon e_start="25963" e_stop="26075"/>
            <exon e_start="26642" e_stop="26758"/>
            <exon e_start="26864" e_stop="26932"/>
            <exon e_start="27576" e_stop="28110"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.897" e_score="0.991"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="24724" e_stop="24902" e_length="179"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.998">
            <gDNA_intron_boundary i_start="24903" i_stop="25413" i_length="511"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="25414" e_stop="25539" e_length="126"/>
          </exon>
          <intron i_serial="2" don_prob="0.992" acc_prob="0.972">
            <gDNA_intron_boundary i_start="25540" i_stop="25793" i_length="254"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="25794" e_stop="25868" e_length="75"/>
          </exon>
          <intron i_serial="3" don_prob="0.961" acc_prob="1.000">
            <gDNA_intron_boundary i_start="25869" i_stop="25962" i_length="94"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="25963" e_stop="26075" e_length="113"/>
          </exon>
          <intron i_serial="4" don_prob="0.985" acc_prob="0.997">
            <gDNA_intron_boundary i_start="26076" i_stop="26641" i_length="566"/>
          </intron>
          <exon e_serial="5" e_score="0.991">
            <gDNA_exon_boundary e_start="26642" e_stop="26758" e_length="117"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.897">
            <gDNA_intron_boundary i_start="26759" i_stop="26863" i_length="105"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="26864" e_stop="26932" e_length="69"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="26933" i_stop="27575" i_length="643"/>
          </intron>
          <exon e_serial="7" e_score="0.998">
            <gDNA_exon_boundary e_start="27576" e_stop="28110" e_length="535"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24724" stop="24902"/>
              <exon start="25414" stop="25539"/>
              <exon start="25794" stop="25868"/>
              <exon start="25963" stop="26075"/>
              <exon start="26642" stop="26758"/>
              <exon start="26864" stop="26932"/>
              <exon start="27576" stop="28110"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585497" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTGTTTCTAAGTTTAGAAGTGGAACAAGAACATCCCGTTTGTCGGCTTTTCGTTCAAAAGCTGAGGAAGCTAAAACATCACGATTATTAGCTTCTCGTTCTAAAGCTGAGGAGGCACAAACATTGCGCCTGTTGTCTTCTGGTTCTAATGCTGAGCAACCACAAATAGCTCCTTTGCCG : GATGCTAATCAGCAGATCATTGCACGGTGTGAGCCAGTGCAGAATGATGATATCATTATTGAAGATCTTATGCAACGCCATGATGTGCTGCTAAATTCGTTTAGATCTCGTTTGACAAAGCTGCAG : GTAGTTCGTCACTACTGGGAACGGAATGACATCAGGGGTGCTTTTGAGGCCTTGAGGAAGTTGTCAGATTATTCT : GTGCAAGCTGATGTTGTGAGTGTCCTCGTAGATAAAATGGAGATTATCACTTTGGATTTGTTTTCCTTCTTGTTGCCTGTACTGTTAGCCTTACTTGAAACTAAGATAGAAAG : GCATGCAAATGTTTCCCTGGAGCTGTTGTTGAAACTTGTTGCAGTCTTTGGACCAGTAGTTCGCTCAGCCGCTTCAGCACGTCCATCTGTTGGGGTTGATCTTCATGCAGAAGCAAG : AATTAAGTGCTGCAGGCAGTGCTTTGCCTACCTCCAAGATATACAGAAAACACTTCCTGAACTTATAAG : GGGAGGGGGTCAGCCGGCAAAAGGTGCAGTACAATTAAATCTCCTACTTCAAGAATCATAGTCCAGTTTATGATATATGCTTTTCCTAATGGCTAAAGCGAGACAACGGAATGGGAAGTTAGCTACTATACAATGTTCTCAAACTTATGTCTCTTTATGGACACCCACAATTTTGCTCCTCGGGTTTCCGTCCTTGCTACCATTTTCACCAACCTTGTAACAGCGGAAAATTGGCAAGATGGAAATGCAGTGTCTGTCCTCCGCCACTGCAACTGGGTTGGGAGGCAAAGGTAAAAACTCTCGACATAATATATCCTTTTGTTGGAGAGTAGCATCGCTATCTTCATTCAGATACGCGGCTTGAACATATTCAAAGTTCCTGGCTGTATGTGTCCATCCATATGTAAGTTGTGTACATGTATCTGCAATAGTAAAAAAAAATTGGATGAGATGTGTACATCATTTGATCAATGAAACAGAGATTCATACACACACCTTCTCTTGCTATCAAAACTCAATATTGAACTTTCTTCTC</gDNA_template>
            <first_frame> L  F  L  S  L  E  V  E  Q  E  H  P  V  C  R  L  F  V  Q  K  L  R  K  L  K  H  H  D  Y  *  L  L  V  L  K  L  R  R  H  K  H  C  A  C  C  L  L  V  L  M  L  S  N  H  K  *  L  L  C  R :   M  L  I  S  R  S  L  H  G  V  S  Q  C  R  M  M  I  S  L  L  K  I  L  C  N  A  M  M  C  C  *  I  R  L  D  L  V  *  Q  S  C  R :   *  F  V  T  T  G  N  G  M  T  S  G  V  L  L  R  P  *  G  S  C  Q  I  I  L :   C  K  L  M  L  *  V  S  S  *  I  K  W  R  L  S  L  W  I  C  F  P  S  C  C  L  Y  C  *  P  Y  L  K  L  R  *  K   : G  M  Q  M  F  P  W  S  C  C  *  N  L  L  Q  S  L  D  Q  *  F  A  Q  P  L  Q  H  V  H  L  L  G  L  I  F  M  Q  K  Q   : E  L  S  A  A  G  S  A  L  P  T  S  K  I  Y  R  K  H  F  L  N  L  *   : G  E  G  V  S  R  Q  K  V  Q  Y  N  *  I  S  Y  F  K  N  H  S  P  V  Y  D  I  C  F  S  *  W  L  K  R  D  N  G  M  G  S  *  L  L  Y  N  V  L  K  L  M  S  L  Y  G  H  P  Q  F  C  S  S  G  F  R  P  C  Y  H  F  H  Q  P  C  N  S  G  K  L  A  R  W  K  C  S  V  C  P  P  P  L  Q  L  G  W  E  A  K  V  K  T  L  D  I  I  Y  P  F  V  G  E  *  H  R  Y  L  H  S  D  T  R  L  E  H  I  Q  S  S  W  L  Y  V  S  I  H  M  *  V  V  Y  M  Y  L  Q  *  *  K  K  I  G  *  D  V  Y  I  I  *  S  M  K  Q  R  F  I  H  T  P  S  L  A  I  K  T  Q  Y  *  T  F  F   </first_frame>
            <second_frame>  C  F  *  V  *  K  W  N  K  N  I  P  F  V  G  F  S  F  K  S  *  G  S  *  N  I  T  I  I  S  F  S  F  *  S  *  G  G  T  N  I  A  P  V  V  F  W  F  *  C  *  A  T  T  N  S  S  F  A   : G  C  *  S  A  D  H  C  T  V  *  A  S  A  E  *  *  Y  H  Y  *  R  S  Y  A  T  P  *  C  A  A  K  F  V  *  I  S  F  D  K  A  A   : G  S  S  S  L  L  G  T  E  *  H  Q  G  C  F  *  G  L  E  E  V  V  R  L  F   : C  A  S  *  C  C  E  C  P  R  R  *  N  G  D  Y  H  F  G  F  V  F  L  L  V  A  C  T  V  S  L  T  *  N  *  D  R  K  :  A  C  K  C  F  P  G  A  V  V  E  T  C  C  S  L  W  T  S  S  S  L  S  R  F  S  T  S  I  C  W  G  *  S  S  C  R  S  K  :  N  *  V  L  Q  A  V  L  C  L  P  P  R  Y  T  E  N  T  S  *  T  Y  K  :  G  R  G  S  A  G  K  R  C  S  T  I  K  S  P  T  S  R  I  I  V  Q  F  M  I  Y  A  F  P  N  G  *  S  E  T  T  E  W  E  V  S  Y  Y  T  M  F  S  N  L  C  L  F  M  D  T  H  N  F  A  P  R  V  S  V  L  A  T  I  F  T  N  L  V  T  A  E  N  W  Q  D  G  N  A  V  S  V  L  R  H  C  N  W  V  G  R  Q  R  *  K  L  S  T  *  Y  I  L  L  L  E  S  S  I  A  I  F  I  Q  I  R  G  L  N  I  F  K  V  P  G  C  M  C  P  S  I  C  K  L  C  T  C  I  C  N  S  K  K  K  L  D  E  M  C  T  S  F  D  Q  *  N  R  D  S  Y  T  H  L  L  L  L  S  K  L  N  I  E  L  S  S  </second_frame>
            <third_frame>   V  S  K  F  R  S  G  T  R  T  S  R  L  S  A  F  R  S  K  A  E  E  A  K  T  S  R  L  L  A  S  R  S  K  A  E  E  A  Q  T  L  R  L  L  S  S  G  S  N  A  E  Q  P  Q  I  A  P  L  P  :  D  A  N  Q  Q  I  I  A  R  C  E  P  V  Q  N  D  D  I  I  I  E  D  L  M  Q  R  H  D  V  L  L  N  S  F  R  S  R  L  T  K  L  Q  :  V  V  R  H  Y  W  E  R  N  D  I  R  G  A  F  E  A  L  R  K  L  S  D  Y  S  :  V  Q  A  D  V  V  S  V  L  V  D  K  M  E  I  I  T  L  D  L  F  S  F  L  L  P  V  L  L  A  L  L  E  T  K  I  E  R :   H  A  N  V  S  L  E  L  L  L  K  L  V  A  V  F  G  P  V  V  R  S  A  A  S  A  R  P  S  V  G  V  D  L  H  A  E  A  R :   I  K  C  C  R  Q  C  F  A  Y  L  Q  D  I  Q  K  T  L  P  E  L  I  R :   G  G  G  Q  P  A  K  G  A  V  Q  L  N  L  L  L  Q  E  S  *  S  S  L  *  Y  M  L  F  L  M  A  K  A  R  Q  R  N  G  K  L  A  T  I  Q  C  S  Q  T  Y  V  S  L  W  T  P  T  I  L  L  L  G  F  P  S  L  L  P  F  S  P  T  L  *  Q  R  K  I  G  K  M  E  M  Q  C  L  S  S  A  T  A  T  G  L  G  G  K  G  K  N  S  R  H  N  I  S  F  C  W  R  V  A  S  L  S  S  F  R  Y  A  A  *  T  Y  S  K  F  L  A  V  C  V  H  P  Y  V  S  C  V  H  V  S  A  I  V  K  K  N  W  M  R  C  V  H  H  L  I  N  E  T  E  I  H  T  H  T  F  S  C  Y  Q  N  S  I  L  N  F  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24726" stop="24902"/>
                    <exon start="25414" stop="25539"/>
                    <exon start="25794" stop="25868"/>
                    <exon start="25963" stop="26075"/>
                    <exon start="26642" stop="26758"/>
                    <exon start="26864" stop="26932"/>
                    <exon start="27576" stop="27636"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>735</number_coding_nucleotides>
                  <number_encoded_amino_acids>245</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VSKFRSGTRTSRLSAFRSKAEEAKTSRLLASRSKAEEAQTLRLLSSGSNAEQPQIAPLPDANQQIIARCEPVQNDDIIIEDLMQRHDVLLNSFRSRLTKLQVVRHYWERNDIRGAFEALRKLSDYSVQADVVSVLVDKMEIITLDLFSFLLPVLLALLETKIERHANVSLELLLKLVAVFGPVVRSAASARPSVGVDLHAEARIKCCRQCFAYLQDIQKTLPELIRGGGQPAKGAVQLNLLLQES*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="27698" stop="27907"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLYNVLKLMSLYGHPQFCSSGFRPCYHFHQPCNSGKLARWKCSVCPPPLQLGWEAKVKTLDIIYPFVGE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="32531" PGL_stop="35306"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="32531" e_stop="32565"/>
            <exon e_start="34244" e_stop="34293"/>
            <exon e_start="34554" e_stop="34631"/>
            <exon e_start="34858" e_stop="35306"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.997" e_score="0.971"/>
          <exon-intron don_prob="0.993" acc_prob="0.914" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.960" e_score="0.949"/>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.971">
            <gDNA_exon_boundary e_start="32531" e_stop="32565" e_length="35"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="32566" i_stop="34243" i_length="1678"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="34244" e_stop="34293" e_length="50"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.914">
            <gDNA_intron_boundary i_start="34294" i_stop="34553" i_length="260"/>
          </intron>
          <exon e_serial="3" e_score="0.949">
            <gDNA_exon_boundary e_start="34554" e_stop="34631" e_length="78"/>
          </exon>
          <intron i_serial="3" don_prob="0.984" acc_prob="0.960">
            <gDNA_intron_boundary i_start="34632" i_stop="34857" i_length="226"/>
          </intron>
          <exon e_serial="4" e_score="0.984">
            <gDNA_exon_boundary e_start="34858" e_stop="35306" e_length="449"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32531" stop="32565"/>
              <exon start="34244" stop="34293"/>
              <exon start="34554" stop="34631"/>
              <exon start="34858" stop="35306"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585567" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCCGGACTTTATATCCTCACTGTTTTACCCCTGAG : GCCTGCAAAGCCAGGTATGAGGAGTTACGTAAGCGCTACTCTGGATGCAC : TGCTTTGTTTGAAGAGTTGCGGAAACGACGAGTGGAAGAATTGAAGCGGGAATTGGTGAGATCTGAGAGCTCCATTGG : GTCACTTGAGTCAAAGATTGAAAGGCTACAGGCTGAGAGAGAGCGATCTGATCAGATAGACCACGGTTTGAGTCGCACTAAATCTCCTGCTCCTCAGACAAAATCAGAAGATATCGAGTCTTCTGTGAAAGAAGAAGCAAAGGATGGGTTGTCTGCTGGCAGCTTCACGCTTGATATTAGAACAAACGGGTCCTCCGAGTCTCAGGTTCCCACCATACCCTCAGCTACAGAGGCAGTCGTGAAGCTAGAACTTTCAGAGTTTTGGGGACGGGACAAAGCTCCAAGTACAAGCAAGGTTCCAGAGTCTGCGAATGGAAATGGTGGGGCTGTGAGGAAGAGAAGAGGTAAGAGGAGAAGAAAAGACACGGTTTGGGATGCCAAAGAAGGGAGCATTGAGGACAGTGACAATGTATGTTCAACGAGTCTCGCCTCCACTTCTCACTGTAAAG</gDNA_template>
            <first_frame> P  G  L  Y  I  L  T  V  L  P  L  R :   P  A  K  P  G  M  R  S  Y  V  S  A  T  L  D  A   : L  L  C  L  K  S  C  G  N  D  E  W  K  N  *  S  G  N  W  *  D  L  R  A  P  L   : G  H  L  S  Q  R  L  K  G  Y  R  L  R  E  S  D  L  I  R  *  T  T  V  *  V  A  L  N  L  L  L  L  R  Q  N  Q  K  I  S  S  L  L  *  K  K  K  Q  R  M  G  C  L  L  A  A  S  R  L  I  L  E  Q  T  G  P  P  S  L  R  F  P  P  Y  P  Q  L  Q  R  Q  S  *  S  *  N  F  Q  S  F  G  D  G  T  K  L  Q  V  Q  A  R  F  Q  S  L  R  M  E  M  V  G  L  *  G  R  E  E  V  R  G  E  E  K  T  R  F  G  M  P  K  K  G  A  L  R  T  V  T  M  Y  V  Q  R  V  S  P  P  L  L  T  V  K </first_frame>
            <second_frame>  P  D  F  I  S  S  L  F  Y  P  *   : G  L  Q  S  Q  V  *  G  V  T  *  A  L  L  W  M  H  :  C  F  V  *  R  V  A  E  T  T  S  G  R  I  E  A  G  I  G  E  I  *  E  L  H  W  :  V  T  *  V  K  D  *  K  A  T  G  *  E  R  A  I  *  S  D  R  P  R  F  E  S  H  *  I  S  C  S  S  D  K  I  R  R  Y  R  V  F  C  E  R  R  S  K  G  W  V  V  C  W  Q  L  H  A  *  Y  *  N  K  R  V  L  R  V  S  G  S  H  H  T  L  S  Y  R  G  S  R  E  A  R  T  F  R  V  L  G  T  G  Q  S  S  K  Y  K  Q  G  S  R  V  C  E  W  K  W  W  G  C  E  E  E  K  R  *  E  E  K  K  R  H  G  L  G  C  Q  R  R  E  H  *  G  Q  *  Q  C  M  F  N  E  S  R  L  H  F  S  L  *   </second_frame>
            <third_frame>   R  T  L  Y  P  H  C  F  T  P  E  :  A  C  K  A  R  Y  E  E  L  R  K  R  Y  S  G  C  T :   A  L  F  E  E  L  R  K  R  R  V  E  E  L  K  R  E  L  V  R  S  E  S  S  I  G :   S  L  E  S  K  I  E  R  L  Q  A  E  R  E  R  S  D  Q  I  D  H  G  L  S  R  T  K  S  P  A  P  Q  T  K  S  E  D  I  E  S  S  V  K  E  E  A  K  D  G  L  S  A  G  S  F  T  L  D  I  R  T  N  G  S  S  E  S  Q  V  P  T  I  P  S  A  T  E  A  V  V  K  L  E  L  S  E  F  W  G  R  D  K  A  P  S  T  S  K  V  P  E  S  A  N  G  N  G  G  A  V  R  K  R  R  G  K  R  R  R  K  D  T  V  W  D  A  K  E  G  S  I  E  D  S  D  N  V  C  S  T  S  L  A  S  T  S  H  C  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32533" stop="32565"/>
                    <exon start="34244" stop="34293"/>
                    <exon start="34554" stop="34631"/>
                    <exon start="34858" stop="35305"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>609</number_coding_nucleotides>
                  <number_encoded_amino_acids>203</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RTLYPHCFTPEACKARYEELRKRYSGCTALFEELRKRRVEELKRELVRSESSIGSLESKIERLQAERERSDQIDHGLSRTKSPAPQTKSEDIESSVKEEAKDGLSAGSFTLDIRTNGSSESQVPTIPSATEAVVKLELSEFWGRDKAPSTSKVPESANGNGGAVRKRRGKRRRKDTVWDAKEGSIEDSDNVCSTSLASTSHCK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="44543" PGL_stop="51797"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="44543" e_stop="44859"/>
            <exon e_start="46556" e_stop="46654"/>
            <exon e_start="46754" e_stop="46861"/>
            <exon e_start="47100" e_stop="47135"/>
            <exon e_start="47422" e_stop="47538"/>
            <exon e_start="47690" e_stop="47773"/>
            <exon e_start="47877" e_stop="47995"/>
            <exon e_start="48622" e_stop="48723"/>
            <exon e_start="49297" e_stop="49413"/>
            <exon e_start="49503" e_stop="49568"/>
            <exon e_start="49821" e_stop="49887"/>
            <exon e_start="50591" e_stop="50644"/>
            <exon e_start="50829" e_stop="50918"/>
            <exon e_start="51097" e_stop="51123"/>
            <exon e_start="51244" e_stop="51270"/>
            <exon e_start="51402" e_stop="51797"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.975" acc_prob="0.991" e_score="0.994"/>
          <exon-intron don_prob="0.982" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.916" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.659" e_score="1.000"/>
          <exon-intron don_prob="0.828" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.732" e_score="1.000"/>
          <exon-intron don_prob="0.923" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.954" acc_prob="0.950" e_score="1.000"/>
          <exon-intron don_prob="0.963" acc_prob="0.952" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.689" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="0.978"/>
          <exon-intron don_prob="0.992" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="44543" e_stop="44859" e_length="317"/>
          </exon>
          <intron i_serial="1" don_prob="0.975" acc_prob="0.991">
            <gDNA_intron_boundary i_start="44860" i_stop="46555" i_length="1696"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="46556" e_stop="46654" e_length="99"/>
          </exon>
          <intron i_serial="2" don_prob="0.982" acc_prob="1.000">
            <gDNA_intron_boundary i_start="46655" i_stop="46753" i_length="99"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="46754" e_stop="46861" e_length="108"/>
          </exon>
          <intron i_serial="3" don_prob="0.916" acc_prob="0.935">
            <gDNA_intron_boundary i_start="46862" i_stop="47099" i_length="238"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="47100" e_stop="47135" e_length="36"/>
          </exon>
          <intron i_serial="4" don_prob="0.960" acc_prob="0.659">
            <gDNA_intron_boundary i_start="47136" i_stop="47421" i_length="286"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="47422" e_stop="47538" e_length="117"/>
          </exon>
          <intron i_serial="5" don_prob="0.828" acc_prob="0.981">
            <gDNA_intron_boundary i_start="47539" i_stop="47689" i_length="151"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="47690" e_stop="47773" e_length="84"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.732">
            <gDNA_intron_boundary i_start="47774" i_stop="47876" i_length="103"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="47877" e_stop="47995" e_length="119"/>
          </exon>
          <intron i_serial="7" don_prob="0.923" acc_prob="0.998">
            <gDNA_intron_boundary i_start="47996" i_stop="48621" i_length="626"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="48622" e_stop="48723" e_length="102"/>
          </exon>
          <intron i_serial="8" don_prob="0.989" acc_prob="0.998">
            <gDNA_intron_boundary i_start="48724" i_stop="49296" i_length="573"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="49297" e_stop="49413" e_length="117"/>
          </exon>
          <intron i_serial="9" don_prob="0.954" acc_prob="0.950">
            <gDNA_intron_boundary i_start="49414" i_stop="49502" i_length="89"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="49503" e_stop="49568" e_length="66"/>
          </exon>
          <intron i_serial="10" don_prob="0.963" acc_prob="0.952">
            <gDNA_intron_boundary i_start="49569" i_stop="49820" i_length="252"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="49821" e_stop="49887" e_length="67"/>
          </exon>
          <intron i_serial="11" don_prob="0.996" acc_prob="0.689">
            <gDNA_intron_boundary i_start="49888" i_stop="50590" i_length="703"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="50591" e_stop="50644" e_length="54"/>
          </exon>
          <intron i_serial="12" don_prob="0.984" acc_prob="0.989">
            <gDNA_intron_boundary i_start="50645" i_stop="50828" i_length="184"/>
          </intron>
          <exon e_serial="13" e_score="0.978">
            <gDNA_exon_boundary e_start="50829" e_stop="50918" e_length="90"/>
          </exon>
          <intron i_serial="13" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="50919" i_stop="51096" i_length="178"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="51097" e_stop="51123" e_length="27"/>
          </exon>
          <intron i_serial="14" don_prob="0.992" acc_prob="0.981">
            <gDNA_intron_boundary i_start="51124" i_stop="51243" i_length="120"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="51244" e_stop="51270" e_length="27"/>
          </exon>
          <intron i_serial="15" don_prob="0.999" acc_prob="0.994">
            <gDNA_intron_boundary i_start="51271" i_stop="51401" i_length="131"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="51402" e_stop="51797" e_length="396"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44543" stop="44859"/>
              <exon start="46556" stop="46654"/>
              <exon start="46754" stop="46861"/>
              <exon start="47100" stop="47135"/>
              <exon start="47422" stop="47538"/>
              <exon start="47690" stop="47773"/>
              <exon start="47877" stop="47995"/>
              <exon start="48622" stop="48723"/>
              <exon start="49297" stop="49413"/>
              <exon start="49503" stop="49568"/>
              <exon start="49821" stop="49887"/>
              <exon start="50591" stop="50644"/>
              <exon start="50829" stop="50918"/>
              <exon start="51097" stop="51123"/>
              <exon start="51244" stop="51270"/>
              <exon start="51402" stop="51797"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U569001" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGTACTTTCCAACAATTTCGTCTCTCTCAAAGACTCTTTCTTTTGCCTAACCCTCCTCCTCCTTCTTTAACCCCACCCCCACCTACACCCCCTACCCCCCCCACTGCTACCCTTTGTTCACTTCTTTCAATATCTATACTGTATCTATATGCTTACCTATACATATATGTAGATTTGTCCCATTTTCTGTTCTGTTTTTGCTGATAAAGACTTGAACTTGTTCTTCAAGGTTCACTTTTTTTTTCACTTTTCAAGATTCTGGAGCTGTTGGGTTGCTATTTTGCTACAAACCCTTGTTGGGTTTTCAGTTCTTGAG : TGTTCGATGAGAACTTTTTCTGTTTCATATTCGCCTGCAACAGGCAATTAAATTATGGCGGTGTTTCTGCTGAAGAAAAGGAGTGTTCTCCTTGACGGG : GGAACATGTGGAGTAAAGATGAGACAGCTACCATTTATGTGGATCATCTGTATAGTTATGTTGTTTATTGTATATAGGACCACCAATTATCAGTATCAACAGACAGAG : ATGGAGTCAAGGTTGGATCCGTTTTATTCTTCAAAG : GACTCTAGTATGGATATGAGAAGCTTGCACAGTTTACCGCGTGGTATTATCCAAGCAAGATCAGATCTGGAGTTAAAGCCTCTGTGGTCAACAACTAGTTCAAAGTCAAAGGCAAAG : GCTAGCAATTCTAGCTCTCATAATTTATTGGCAGTTCCAGTTGGCATCAAACAGAAGAGCAATGTTGATGCTCTCGTCCAAAAG : TTTCTTTCAGCAAATTTTACTGTCATTCTATTCCACTATGATGGTAATGTTGATGGGTGGGAAGACCTCCAATGGAGTAAAGATGCCATTCACATTGTTGCTCACAATCAGACAAAATG : GTGGTTTGCGAAGAGATTTTTACATCCTGCAGTTGTTTCAATTTATGATTACATTTTCCTTTGGGATGAAGATTTGGGTGTGGAGAATTTCCATCCTGGAAG : GTACCTTGAAATAGTAAAATCTGAAGGACTGGAAATTTCTCAGCCAGCTTTAGACCCGAATTCAACTGGTATCCATCATAGAATCACAATAAGAAGCAGAACAAATAGGTTCCACAG : AAGGGTCTACGATATTAGAGGTAGTACGAAGTGTTCAGACGAAAGCGAAGGTCCCCCATGCACCGG : ATTTGTGGAGGGAATGGCTCCGGTCTTTTCCAGATCTGCATGGCTTTGTGCCTGGCATCTTATACAG : AATGATCTTGTTCATGGATGGGGAATGGACATGAAACTTGGTTATTGTGCACAG : GGAGATCGATCCAAAAAGGTGGGAGTAGTTGATAGTGAATATGTAGTGCACCAGAGCATCCAAACTTTGGGCGGACAATCACTGAAAAAG : GATTCAAATTCTGAAGAGTCTGTGAAG : AGGCACGTTGTTGATGTGCGATCTGAG : ATTCGGAGACAATCAACTTATGAGCTGCAAATATTCAAGGATCGATGGGAACGAGCTGTGAAGCAGGACAAGAACTGGGCAGATCCGTTTAAAGCTAGCCAGAGACGTAGACAGCTGTATAAACAAAGGCGAAAATCAAAGGTGAAGAAGCTGAGATAAGCAATGGGATAGATAAAACAAAAGGTTCATAGGTTGAGCCTTGTAATTTGTTCTTTCTTTTTAGGCCCCATGAATCTCATCATTAGTTCATTACATATATAGGTTTAGTTTCTCCTAATTTTTCTTCTTTTTAACTTTATTTTTTTTCACTTCTCATTTATGTACATCAATTTTTTTTTTTGTAACTAGCCTTCGGTTACCACACTGTTTCTTTTGATTTTAAGTTCCAGTTTCTTC</gDNA_template>
            <first_frame> R  Y  F  P  T  I  S  S  L  S  K  T  L  S  F  A  *  P  S  S  S  F  F  N  P  T  P  T  Y  T  P  Y  P  P  H  C  Y  P  L  F  T  S  F  N  I  Y  T  V  S  I  C  L  P  I  H  I  C  R  F  V  P  F  S  V  L  F  L  L  I  K  T  *  T  C  S  S  R  F  T  F  F  F  T  F  Q  D  S  G  A  V  G  L  L  F  C  Y  K  P  L  L  G  F  Q  F  L  S :   V  R  *  E  L  F  L  F  H  I  R  L  Q  Q  A  I  K  L  W  R  C  F  C  *  R  K  G  V  F  S  L  T  G :   E  H  V  E  *  R  *  D  S  Y  H  L  C  G  S  S  V  *  L  C  C  L  L  Y  I  G  P  P  I  I  S  I  N  R  Q  R :   W  S  Q  G  W  I  R  F  I  L  Q  R :   T  L  V  W  I  *  E  A  C  T  V  Y  R  V  V  L  S  K  Q  D  Q  I  W  S  *  S  L  C  G  Q  Q  L  V  Q  S  Q  R  Q  R :   L  A  I  L  A  L  I  I  Y  W  Q  F  Q  L  A  S  N  R  R  A  M  L  M  L  S  S  K  S :   F  F  Q  Q  I  L  L  S  F  Y  S  T  M  M  V  M  L  M  G  G  K  T  S  N  G  V  K  M  P  F  T  L  L  L  T  I  R  Q  N   : G  G  L  R  R  D  F  Y  I  L  Q  L  F  Q  F  M  I  T  F  S  F  G  M  K  I  W  V  W  R  I  S  I  L  E   : G  T  L  K  *  *  N  L  K  D  W  K  F  L  S  Q  L  *  T  R  I  Q  L  V  S  I  I  E  S  Q  *  E  A  E  Q  I  G  S  T   : E  G  S  T  I  L  E  V  V  R  S  V  Q  T  K  A  K  V  P  H  A  P   : D  L  W  R  E  W  L  R  S  F  P  D  L  H  G  F  V  P  G  I  L  Y  R :   M  I  L  F  M  D  G  E  W  T  *  N  L  V  I  V  H  R :   E  I  D  P  K  R  W  E  *  L  I  V  N  M  *  C  T  R  A  S  K  L  W  A  D  N  H  *  K  R :   I  Q  I  L  K  S  L  *  R :   G  T  L  L  M  C  D  L  R :   F  G  D  N  Q  L  M  S  C  K  Y  S  R  I  D  G  N  E  L  *  S  R  T  R  T  G  Q  I  R  L  K  L  A  R  D  V  D  S  C  I  N  K  G  E  N  Q  R  *  R  S  *  D  K  Q  W  D  R  *  N  K  R  F  I  G  *  A  L  *  F  V  L  S  F  *  A  P  *  I  S  S  L  V  H  Y  I  Y  R  F  S  F  S  *  F  F  F  F  L  T  L  F  F  F  T  S  H  L  C  T  S  I  F  F  F  V  T  S  L  R  L  P  H  C  F  F  *  F  *  V  P  V  S   </first_frame>
            <second_frame>  G  T  F  Q  Q  F  R  L  S  Q  R  L  F  L  L  P  N  P  P  P  P  S  L  T  P  P  P  P  T  P  P  T  P  P  T  A  T  L  C  S  L  L  S  I  S  I  L  Y  L  Y  A  Y  L  Y  I  Y  V  D  L  S  H  F  L  F  C  F  C  *  *  R  L  E  L  V  L  Q  G  S  L  F  F  S  L  F  K  I  L  E  L  L  G  C  Y  F  A  T  N  P  C  W  V  F  S  S  *   : V  F  D  E  N  F  F  C  F  I  F  A  C  N  R  Q  L  N  Y  G  G  V  S  A  E  E  K  E  C  S  P  *  R   : G  N  M  W  S  K  D  E  T  A  T  I  Y  V  D  H  L  Y  S  Y  V  V  Y  C  I  *  D  H  Q  L  S  V  S  T  D  R   : D  G  V  K  V  G  S  V  L  F  F  K   : G  L  *  Y  G  Y  E  K  L  A  Q  F  T  A  W  Y  Y  P  S  K  I  R  S  G  V  K  A  S  V  V  N  N  *  F  K  V  K  G  K   : G  *  Q  F  *  L  S  *  F  I  G  S  S  S  W  H  Q  T  E  E  Q  C  *  C  S  R  P  K   : V  S  F  S  K  F  Y  C  H  S  I  P  L  *  W  *  C  *  W  V  G  R  P  P  M  E  *  R  C  H  S  H  C  C  S  Q  S  D  K  M  :  V  V  C  E  E  I  F  T  S  C  S  C  F  N  L  *  L  H  F  P  L  G  *  R  F  G  C  G  E  F  P  S  W  K  :  V  P  *  N  S  K  I  *  R  T  G  N  F  S  A  S  F  R  P  E  F  N  W  Y  P  S  *  N  H  N  K  K  Q  N  K  *  V  P  Q  :  K  G  L  R  Y  *  R  *  Y  E  V  F  R  R  K  R  R  S  P  M  H  R  :  I  C  G  G  N  G  S  G  L  F  Q  I  C  M  A  L  C  L  A  S  Y  T   : E  *  S  C  S  W  M  G  N  G  H  E  T  W  L  L  C  T   : G  R  S  I  Q  K  G  G  S  S  *  *  *  I  C  S  A  P  E  H  P  N  F  G  R  T  I  T  E  K   : G  F  K  F  *  R  V  C  E   : E  A  R  C  *  C  A  I  *   : D  S  E  T  I  N  L  *  A  A  N  I  Q  G  S  M  G  T  S  C  E  A  G  Q  E  L  G  R  S  V  *  S  *  P  E  T  *  T  A  V  *  T  K  A  K  I  K  G  E  E  A  E  I  S  N  G  I  D  K  T  K  G  S  *  V  E  P  C  N  L  F  F  L  F  R  P  H  E  S  H  H  *  F  I  T  Y  I  G  L  V  S  P  N  F  S  S  F  *  L  Y  F  F  S  L  L  I  Y  V  H  Q  F  F  F  L  *  L  A  F  G  Y  H  T  V  S  F  D  F  K  F  Q  F  L  </second_frame>
            <third_frame>   V  L  S  N  N  F  V  S  L  K  D  S  F  F  C  L  T  L  L  L  L  L  *  P  H  P  H  L  H  P  L  P  P  P  L  L  P  F  V  H  F  F  Q  Y  L  Y  C  I  Y  M  L  T  Y  T  Y  M  *  I  C  P  I  F  C  S  V  F  A  D  K  D  L  N  L  F  F  K  V  H  F  F  F  H  F  S  R  F  W  S  C  W  V  A  I  L  L  Q  T  L  V  G  F  S  V  L  E  :  C  S  M  R  T  F  S  V  S  Y  S  P  A  T  G  N  *  I  M  A  V  F  L  L  K  K  R  S  V  L  L  D  G  :  G  T  C  G  V  K  M  R  Q  L  P  F  M  W  I  I  C  I  V  M  L  F  I  V  Y  R  T  T  N  Y  Q  Y  Q  Q  T  E  :  M  E  S  R  L  D  P  F  Y  S  S  K  :  D  S  S  M  D  M  R  S  L  H  S  L  P  R  G  I  I  Q  A  R  S  D  L  E  L  K  P  L  W  S  T  T  S  S  K  S  K  A  K  :  A  S  N  S  S  S  H  N  L  L  A  V  P  V  G  I  K  Q  K  S  N  V  D  A  L  V  Q  K  :  F  L  S  A  N  F  T  V  I  L  F  H  Y  D  G  N  V  D  G  W  E  D  L  Q  W  S  K  D  A  I  H  I  V  A  H  N  Q  T  K  W :   W  F  A  K  R  F  L  H  P  A  V  V  S  I  Y  D  Y  I  F  L  W  D  E  D  L  G  V  E  N  F  H  P  G  R :   Y  L  E  I  V  K  S  E  G  L  E  I  S  Q  P  A  L  D  P  N  S  T  G  I  H  H  R  I  T  I  R  S  R  T  N  R  F  H  R :   R  V  Y  D  I  R  G  S  T  K  C  S  D  E  S  E  G  P  P  C  T  G :   F  V  E  G  M  A  P  V  F  S  R  S  A  W  L  C  A  W  H  L  I  Q  :  N  D  L  V  H  G  W  G  M  D  M  K  L  G  Y  C  A  Q  :  G  D  R  S  K  K  V  G  V  V  D  S  E  Y  V  V  H  Q  S  I  Q  T  L  G  G  Q  S  L  K  K  :  D  S  N  S  E  E  S  V  K  :  R  H  V  V  D  V  R  S  E  :  I  R  R  Q  S  T  Y  E  L  Q  I  F  K  D  R  W  E  R  A  V  K  Q  D  K  N  W  A  D  P  F  K  A  S  Q  R  R  R  Q  L  Y  K  Q  R  R  K  S  K  V  K  K  L  R  *  A  M  G  *  I  K  Q  K  V  H  R  L  S  L  V  I  C  S  F  F  L  G  P  M  N  L  I  I  S  S  L  H  I  *  V  *  F  L  L  I  F  L  L  F  N  F  I  F  F  H  F  S  F  M  Y  I  N  F  F  F  C  N  *  P  S  V  T  T  L  F  L  L  I  L  S  S  S  F  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46607" stop="46654"/>
                    <exon start="46754" stop="46861"/>
                    <exon start="47100" stop="47135"/>
                    <exon start="47422" stop="47538"/>
                    <exon start="47690" stop="47773"/>
                    <exon start="47877" stop="47995"/>
                    <exon start="48622" stop="48723"/>
                    <exon start="49297" stop="49413"/>
                    <exon start="49503" stop="49568"/>
                    <exon start="49821" stop="49887"/>
                    <exon start="50591" stop="50644"/>
                    <exon start="50829" stop="50918"/>
                    <exon start="51097" stop="51123"/>
                    <exon start="51244" stop="51270"/>
                    <exon start="51402" stop="51560"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1218</number_coding_nucleotides>
                  <number_encoded_amino_acids>406</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IMAVFLLKKRSVLLDGGTCGVKMRQLPFMWIICIVMLFIVYRTTNYQYQQTEMESRLDPFYSSKDSSMDMRSLHSLPRGIIQARSDLELKPLWSTTSSKSKAKASNSSSHNLLAVPVGIKQKSNVDALVQKFLSANFTVILFHYDGNVDGWEDLQWSKDAIHIVAHNQTKWWFAKRFLHPAVVSIYDYIFLWDEDLGVENFHPGRYLEIVKSEGLEISQPALDPNSTGIHHRITIRSRTNRFHRRVYDIRGSTKCSDESEGPPCTGFVEGMAPVFSRSAWLCAWHLIQNDLVHGWGMDMKLGYCAQGDRSKKVGVVDSEYVVHQSIQTLGGQSLKKDSNSEESVKRHVVDVRSEIRRQSTYELQIFKDRWERAVKQDKNWADPFKASQRRRQLYKQRRKSKVKKLR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44544" stop="44747"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GTFQQFRLSQRLFLLPNPPPPSLTPPPPTPPTPPTATLCSLLSISILYLYAYLYIYVDLSHFLFCFC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44716" stop="44859"/>
                    <exon start="46556" stop="46606"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ICPIFCSVFADKDLNLFFKVHFFFHFSRFWSCWVAILLQTLVGFSVLECSMRTFSVSYSPATGN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="52779" PGL_stop="55829"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52779" e_stop="53458"/>
            <exon e_start="54692" e_stop="54989"/>
            <exon e_start="55584" e_stop="55829"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="0.757" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="52779" e_stop="53458" e_length="680"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="0.757">
            <gDNA_intron_boundary i_start="53459" i_stop="54691" i_length="1233"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="54692" e_stop="54989" e_length="298"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.993">
            <gDNA_intron_boundary i_start="54990" i_stop="55583" i_length="594"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="55584" e_stop="55829" e_length="246"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52779" stop="53458"/>
              <exon start="54692" stop="54989"/>
              <exon start="55584" stop="55829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572943" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTTTTTTCTCTCTCTCTCATCGCTGCGTAAAGCTATGAGTTTAATTGCAGGTTCATACGAGAGATTCATTTGGGGATTCAAGTTGAGATCCCTCAAAAACGATCAGAATTACGAACTAACCCCTCTATTCTCCTTCCCTTCACATCTCTCACCAATTAAATGCACCGCCGTCGCCGGTTCTGCCGCTGTATCCGGCGGCGCCGATGACACTATCAAAATCTATGACCTTTCTACTTGCTCAGAAATTGGGTCACTACACCACTCCGCCACCGTTACTTCACTTTCCTTTTTTACCCCTTCTTCATTCTCCTTCCCTCGTAACCTTATTGCCGCGTCTGAAGATGGTTCGGTTTCCATATATGATGCTGATCCTTTTGTTCATCTCAAGACGGTTAAAGTGCATCGTAAGGCAGTGAATTCTATATGCATTCATCCGTCGGGGAGGTTGGCATTGACTGTTGGAAGAGATGAATGTATGGCTATGGTTAATTTGGTTAGAGGAAGGAGAAGTTTTTATTGTAGGTTGGGAAAAGAAGCTTCTTTAGTTAATTTTAGTGATGGTGGTGAAAAGTTTTTTATGGTTATGGATGATAAGATTTCTGTACATGAATCTGAAGATGCCAAAGCTATTCTAGAGCTTGACAGTAAGAAGAGGGTGCTTTGTGCCACTTATGGGATG : CATGGTATTTTGTTTACTGGGGGAGAGGACCGGAGTATTAAAGCTTGGGACATTACTAGTGGAAAACTTGCATATAGCATTGAAGATGCACATTCTACCCGTGTGAAAGGCATTGTTGTGCTACACAAAAACAGTGATGGTGATGCTGAAGATCATCAACACATAGTAGCATCAGCATCATCAGATGGGGTCATACGTGTTTGGGATGTTCGCATGACTAACAAAGATAAGCCAAATCCACTGGCTGAGGTCAATACAAAATCCAGGCTGACTTGTCTGGCTGGATCATCCATCAAAT : CTATGAAAAGACCACAGGTTGGAAATACTACTTCAAATGGACAACAGCTCGACGCAGGTGAAGAATCATAGTGCTGTAATTTGGTAATGACAATCACATAGTGTATCTGCCATATTTTTCCTTTAGATTCCCCCTCCCCCTGAAGTTGTTGGAATCATATCAATTTTGTTAGTTAAAAGTTGATCACTCGAAATCTATTTTGTAAGGCGTGTGTATTATTTAATTAATGAATATGAGCAGTTATTT</gDNA_template>
            <first_frame> L  F  F  S  L  S  H  R  C  V  K  L  *  V  *  L  Q  V  H  T  R  D  S  F  G  D  S  S  *  D  P  S  K  T  I  R  I  T  N  *  P  L  Y  S  P  S  L  H  I  S  H  Q  L  N  A  P  P  S  P  V  L  P  L  Y  P  A  A  P  M  T  L  S  K  S  M  T  F  L  L  A  Q  K  L  G  H  Y  T  T  P  P  P  L  L  H  F  P  F  L  P  L  L  H  S  P  S  L  V  T  L  L  P  R  L  K  M  V  R  F  P  Y  M  M  L  I  L  L  F  I  S  R  R  L  K  C  I  V  R  Q  *  I  L  Y  A  F  I  R  R  G  G  W  H  *  L  L  E  E  M  N  V  W  L  W  L  I  W  L  E  E  G  E  V  F  I  V  G  W  E  K  K  L  L  *  L  I  L  V  M  V  V  K  S  F  L  W  L  W  M  I  R  F  L  Y  M  N  L  K  M  P  K  L  F  *  S  L  T  V  R  R  G  C  F  V  P  L  M  G  C :   M  V  F  C  L  L  G  E  R  T  G  V  L  K  L  G  T  L  L  V  E  N  L  H  I  A  L  K  M  H  I  L  P  V  *  K  A  L  L  C  Y  T  K  T  V  M  V  M  L  K  I  I  N  T  *  *  H  Q  H  H  Q  M  G  S  Y  V  F  G  M  F  A  *  L  T  K  I  S  Q  I  H  W  L  R  S  I  Q  N  P  G  *  L  V  W  L  D  H  P  S  N  :  L  *  K  D  H  R  L  E  I  L  L  Q  M  D  N  S  S  T  Q  V  K  N  H  S  A  V  I  W  *  *  Q  S  H  S  V  S  A  I  F  F  L  *  I  P  P  P  P  E  V  V  G  I  I  S  I  L  L  V  K  S  *  S  L  E  I  Y  F  V  R  R  V  Y  Y  L  I  N  E  Y  E  Q  L  F </first_frame>
            <second_frame>  F  F  S  L  S  L  I  A  A  *  S  Y  E  F  N  C  R  F  I  R  E  I  H  L  G  I  Q  V  E  I  P  Q  K  R  S  E  L  R  T  N  P  S  I  L  L  P  F  T  S  L  T  N  *  M  H  R  R  R  R  F  C  R  C  I  R  R  R  R  *  H  Y  Q  N  L  *  P  F  Y  L  L  R  N  W  V  T  T  P  L  R  H  R  Y  F  T  F  L  F  Y  P  F  F  I  L  L  P  S  *  P  Y  C  R  V  *  R  W  F  G  F  H  I  *  C  *  S  F  C  S  S  Q  D  G  *  S  A  S  *  G  S  E  F  Y  M  H  S  S  V  G  E  V  G  I  D  C  W  K  R  *  M  Y  G  Y  G  *  F  G  *  R  K  E  K  F  L  L  *  V  G  K  R  S  F  F  S  *  F  *  *  W  W  *  K  V  F  Y  G  Y  G  *  *  D  F  C  T  *  I  *  R  C  Q  S  Y  S  R  A  *  Q  *  E  E  G  A  L  C  H  L  W  D   : A  W  Y  F  V  Y  W  G  R  G  P  E  Y  *  S  L  G  H  Y  *  W  K  T  C  I  *  H  *  R  C  T  F  Y  P  C  E  R  H  C  C  A  T  Q  K  Q  *  W  *  C  *  R  S  S  T  H  S  S  I  S  I  I  R  W  G  H  T  C  L  G  C  S  H  D  *  Q  R  *  A  K  S  T  G  *  G  Q  Y  K  I  Q  A  D  L  S  G  W  I  I  H  Q  I :   Y  E  K  T  T  G  W  K  Y  Y  F  K  W  T  T  A  R  R  R  *  R  I  I  V  L  *  F  G  N  D  N  H  I  V  Y  L  P  Y  F  S  F  R  F  P  L  P  L  K  L  L  E  S  Y  Q  F  C  *  L  K  V  D  H  S  K  S  I  L  *  G  V  C  I  I  *  L  M  N  M  S  S  Y   </second_frame>
            <third_frame>   F  F  L  S  L  S  S  L  R  K  A  M  S  L  I  A  G  S  Y  E  R  F  I  W  G  F  K  L  R  S  L  K  N  D  Q  N  Y  E  L  T  P  L  F  S  F  P  S  H  L  S  P  I  K  C  T  A  V  A  G  S  A  A  V  S  G  G  A  D  D  T  I  K  I  Y  D  L  S  T  C  S  E  I  G  S  L  H  H  S  A  T  V  T  S  L  S  F  F  T  P  S  S  F  S  F  P  R  N  L  I  A  A  S  E  D  G  S  V  S  I  Y  D  A  D  P  F  V  H  L  K  T  V  K  V  H  R  K  A  V  N  S  I  C  I  H  P  S  G  R  L  A  L  T  V  G  R  D  E  C  M  A  M  V  N  L  V  R  G  R  R  S  F  Y  C  R  L  G  K  E  A  S  L  V  N  F  S  D  G  G  E  K  F  F  M  V  M  D  D  K  I  S  V  H  E  S  E  D  A  K  A  I  L  E  L  D  S  K  K  R  V  L  C  A  T  Y  G  M  :  H  G  I  L  F  T  G  G  E  D  R  S  I  K  A  W  D  I  T  S  G  K  L  A  Y  S  I  E  D  A  H  S  T  R  V  K  G  I  V  V  L  H  K  N  S  D  G  D  A  E  D  H  Q  H  I  V  A  S  A  S  S  D  G  V  I  R  V  W  D  V  R  M  T  N  K  D  K  P  N  P  L  A  E  V  N  T  K  S  R  L  T  C  L  A  G  S  S  I  K   : S  M  K  R  P  Q  V  G  N  T  T  S  N  G  Q  Q  L  D  A  G  E  E  S  *  C  C  N  L  V  M  T  I  T  *  C  I  C  H  I  F  P  L  D  S  P  S  P  *  S  C  W  N  H  I  N  F  V  S  *  K  L  I  T  R  N  L  F  C  K  A  C  V  L  F  N  *  *  I  *  A  V  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52781" stop="53458"/>
                    <exon start="54692" stop="54989"/>
                    <exon start="55584" stop="55654"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1044</number_coding_nucleotides>
                  <number_encoded_amino_acids>348</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFLSLSSLRKAMSLIAGSYERFIWGFKLRSLKNDQNYELTPLFSFPSHLSPIKCTAVAGSAAVSGGADDTIKIYDLSTCSEIGSLHHSATVTSLSFFTPSSFSFPRNLIAASEDGSVSIYDADPFVHLKTVKVHRKAVNSICIHPSGRLALTVGRDECMAMVNLVRGRRSFYCRLGKEASLVNFSDGGEKFFMVMDDKISVHESEDAKAILELDSKKRVLCATYGMHGILFTGGEDRSIKAWDITSGKLAYSIEDAHSTRVKGIVVLHKNSDGDAEDHQHIVASASSDGVIRVWDVRMTNKDKPNPLAEVNTKSRLTCLAGSSIKSMKRPQVGNTTSNGQQLDAGEES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="57505" PGL_stop="63815"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57505" e_stop="57782"/>
            <exon e_start="59005" e_stop="59070"/>
            <exon e_start="59445" e_stop="59555"/>
            <exon e_start="59658" e_stop="59720"/>
            <exon e_start="60585" e_stop="60618"/>
            <exon e_start="61043" e_stop="61165"/>
            <exon e_start="62021" e_stop="62083"/>
            <exon e_start="62171" e_stop="62264"/>
            <exon e_start="62520" e_stop="62565"/>
            <exon e_start="62822" e_stop="62889"/>
            <exon e_start="63132" e_stop="63180"/>
            <exon e_start="63374" e_stop="63439"/>
            <exon e_start="63536" e_stop="63815"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.950" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.812" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="0.909" acc_prob="0.876" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.224" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.615" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.936" acc_prob="0.877" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="57505" e_stop="57782" e_length="278"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="57783" i_stop="59004" i_length="1222"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="59005" e_stop="59070" e_length="66"/>
          </exon>
          <intron i_serial="2" don_prob="0.987" acc_prob="0.997">
            <gDNA_intron_boundary i_start="59071" i_stop="59444" i_length="374"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="59445" e_stop="59555" e_length="111"/>
          </exon>
          <intron i_serial="3" don_prob="0.950" acc_prob="0.977">
            <gDNA_intron_boundary i_start="59556" i_stop="59657" i_length="102"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="59658" e_stop="59720" e_length="63"/>
          </exon>
          <intron i_serial="4" don_prob="0.812" acc_prob="1.000">
            <gDNA_intron_boundary i_start="59721" i_stop="60584" i_length="864"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="60585" e_stop="60618" e_length="34"/>
          </exon>
          <intron i_serial="5" don_prob="0.978" acc_prob="0.966">
            <gDNA_intron_boundary i_start="60619" i_stop="61042" i_length="424"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="61043" e_stop="61165" e_length="123"/>
          </exon>
          <intron i_serial="6" don_prob="0.909" acc_prob="0.876">
            <gDNA_intron_boundary i_start="61166" i_stop="62020" i_length="855"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="62021" e_stop="62083" e_length="63"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.224">
            <gDNA_intron_boundary i_start="62084" i_stop="62170" i_length="87"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="62171" e_stop="62264" e_length="94"/>
          </exon>
          <intron i_serial="8" don_prob="0.972" acc_prob="0.615">
            <gDNA_intron_boundary i_start="62265" i_stop="62519" i_length="255"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="62520" e_stop="62565" e_length="46"/>
          </exon>
          <intron i_serial="9" don_prob="0.975" acc_prob="0.997">
            <gDNA_intron_boundary i_start="62566" i_stop="62821" i_length="256"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="62822" e_stop="62889" e_length="68"/>
          </exon>
          <intron i_serial="10" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="62890" i_stop="63131" i_length="242"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="63132" e_stop="63180" e_length="49"/>
          </exon>
          <intron i_serial="11" don_prob="0.996" acc_prob="0.000">
            <gDNA_intron_boundary i_start="63181" i_stop="63373" i_length="193"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="63374" e_stop="63439" e_length="66"/>
          </exon>
          <intron i_serial="12" don_prob="0.936" acc_prob="0.877">
            <gDNA_intron_boundary i_start="63440" i_stop="63535" i_length="96"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="63536" e_stop="63815" e_length="280"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57505" stop="57782"/>
              <exon start="59005" stop="59070"/>
              <exon start="59445" stop="59555"/>
              <exon start="59658" stop="59720"/>
              <exon start="60585" stop="60618"/>
              <exon start="61043" stop="61165"/>
              <exon start="62021" stop="62083"/>
              <exon start="62171" stop="62264"/>
              <exon start="62520" stop="62565"/>
              <exon start="62822" stop="62889"/>
              <exon start="63132" stop="63180"/>
              <exon start="63374" stop="63439"/>
              <exon start="63536" stop="63815"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U577940" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTCTTTCTACCACTCTAGAATTGTAGTGGAATTTTCTTTCTTCTTGTTTTTCTCATTCAAACTACTATAGTTTTCAAGACTCTGCCTTTTTCCCCCTTCTCTGCTTAGCCTTTTCCACCTATTTTTTGCTATTCAGATCTCAAGTTTTACACTTTGCTTTCCCTCTGTAAATTTCTTGTTTTGTGGCAAAATTCAGAAAGTAGCAAAGTTTTCTTGAAATGGCCGGCCGTTATGATCATAACCCTTTTGAAGAAGAAGAAGAAGTTAACCCTTTTGCT : GATGGCGGAGGCAGAGGGAAATCTTCAGGGCAATCAAAATTTAGTGGAGGTGCATTTTATACCACA : TCCGGGAGTGTGCCTCCAGCAACAAACTCCAGACTTTCACCCCTTCCGCCAGAACCAGCTGATTTCTATGACCGCAATGCGTCAATTGATATTCCTCTTGACAGTGCTTCG : GACCTGAAAAAGAAAGAAAAAGAATTACAGTCTAAGGAGAATGAATTGCGGAGGAGGGAACAG : GATCTAAAAAGGAGAGAAGATGCTGCTGCACGAG : CCGGCATTGTTCTCGAGGAGAAAAATTGGCCTCCGTTCTTCCCAATCATCCATCATGATATTGCAAATGAAATACCAATTCATCTTCAAAAGCTACAATATGTTGCATTTACAACGTTCTTGG : GACTTATTGCATGCCTATTATGGAACATTGTAGCTACAACTACAGCATGGATTAAAGAAGGAG : ATGTGAAGATCTGGTTCCTTTCTATCATATACTTCATATCAGGTGTTCCTGGAGCCTACTTCATGTGGTATCGTCCTCTGTATCGTGCGTTTAG : AACTGAGGGTGCCATGAAGTTTGCGTGGTTTTTCTTGTTTTACTTG : GTTCACATTGTATTTTGCGTCTTTGCTGCTGTTGCTCCTCCAGTAGTCTTCAGAGGAAAATCCCTTAC : AGGCATCCTGCCTGCGGTGGATCTCATCGGCAAAAATGTACTTGTTGGG : ATTTTCTACTTCATCGGTTTTGGGTTATTTTGTCTCGAGTCATTGCTGAGCATTTGGGTTATTCAG : CAAGTATACATGTATTTCCGAGGAAGTGGTAAAGCCGCGCAGATGAAGCAAGAAGCTGCTAGAGGTGCCCTTAGAGCAGCAATATAATTGAAAGAAATGTTCTTGGTAGAAGGCTGTTAAATATGCTTTTGGTGATTATATGTTTTAGTTAGTTCAATTTGACATATATGCTGCTTGTTTTGCATATGCTTTTGGTGATTATGCTTTTATTTATGACTACTTAGACCAAAGTGCTGTTAGGAAAAAGATTTAGAATTCCTTTTGTTTAATTGGAGACACA</gDNA_template>
            <first_frame> V  F  L  P  L  *  N  C  S  G  I  F  F  L  L  V  F  L  I  Q  T  T  I  V  F  K  T  L  P  F  S  P  F  S  A  *  P  F  P  P  I  F  C  Y  S  D  L  K  F  Y  T  L  L  S  L  C  K  F  L  V  L  W  Q  N  S  E  S  S  K  V  F  L  K  W  P  A  V  M  I  I  T  L  L  K  K  K  K  K  L  T  L  L  L :   M  A  E  A  E  G  N  L  Q  G  N  Q  N  L  V  E  V  H  F  I  P  H :   P  G  V  C  L  Q  Q  Q  T  P  D  F  H  P  F  R  Q  N  Q  L  I  S  M  T  A  M  R  Q  L  I  F  L  L  T  V  L  R :   T  *  K  R  K  K  K  N  Y  S  L  R  R  M  N  C  G  G  G  N  R :   I  *  K  G  E  K  M  L  L  H  E  :  P  A  L  F  S  R  R  K  I  G  L  R  S  S  Q  S  S  I  M  I  L  Q  M  K  Y  Q  F  I  F  K  S  Y  N  M  L  H  L  Q  R  S  W  :  D  L  L  H  A  Y  Y  G  T  L  *  L  Q  L  Q  H  G  L  K  K  E  :  M  *  R  S  G  S  F  L  S  Y  T  S  Y  Q  V  F  L  E  P  T  S  C  G  I  V  L  C  I  V  R  L   : E  L  R  V  P  *  S  L  R  G  F  S  C  F  T  W :   F  T  L  Y  F  A  S  L  L  L  L  L  L  Q  *  S  S  E  E  N  P  L   : Q  A  S  C  L  R  W  I  S  S  A  K  M  Y  L  L  G :   F  S  T  S  S  V  L  G  Y  F  V  S  S  H  C  *  A  F  G  L  F  S :   K  Y  T  C  I  S  E  E  V  V  K  P  R  R  *  S  K  K  L  L  E  V  P  L  E  Q  Q  Y  N  *  K  K  C  S  W  *  K  A  V  K  Y  A  F  G  D  Y  M  F  *  L  V  Q  F  D  I  Y  A  A  C  F  A  Y  A  F  G  D  Y  A  F  I  Y  D  Y  L  D  Q  S  A  V  R  K  K  I  *  N  S  F  C  L  I  G  D  T </first_frame>
            <second_frame>  S  F  Y  H  S  R  I  V  V  E  F  S  F  F  L  F  F  S  F  K  L  L  *  F  S  R  L  C  L  F  P  P  S  L  L  S  L  F  H  L  F  F  A  I  Q  I  S  S  F  T  L  C  F  P  S  V  N  F  L  F  C  G  K  I  Q  K  V  A  K  F  S  *  N  G  R  P  L  *  S  *  P  F  *  R  R  R  R  S  *  P  F  C   : *  W  R  R  Q  R  E  I  F  R  A  I  K  I  *  W  R  C  I  L  Y  H   : I  R  E  C  A  S  S  N  K  L  Q  T  F  T  P  S  A  R  T  S  *  F  L  *  P  Q  C  V  N  *  Y  S  S  *  Q  C  F   : G  P  E  K  E  R  K  R  I  T  V  *  G  E  *  I  A  E  E  G  T   : G  S  K  K  E  R  R  C  C  C  T  S :   R  H  C  S  R  G  E  K  L  A  S  V  L  P  N  H  P  S  *  Y  C  K  *  N  T  N  S  S  S  K  A  T  I  C  C  I  Y  N  V  L  G :   T  Y  C  M  P  I  M  E  H  C  S  Y  N  Y  S  M  D  *  R  R  R :   C  E  D  L  V  P  F  Y  H  I  L  H  I  R  C  S  W  S  L  L  H  V  V  S  S  S  V  S  C  V  *  :  N  *  G  C  H  E  V  C  V  V  F  L  V  L  L   : G  S  H  C  I  L  R  L  C  C  C  C  S  S  S  S  L  Q  R  K  I  P  Y  :  R  H  P  A  C  G  G  S  H  R  Q  K  C  T  C  W   : D  F  L  L  H  R  F  W  V  I  L  S  R  V  I  A  E  H  L  G  Y  S   : A  S  I  H  V  F  P  R  K  W  *  S  R  A  D  E  A  R  S  C  *  R  C  P  *  S  S  N  I  I  E  R  N  V  L  G  R  R  L  L  N  M  L  L  V  I  I  C  F  S  *  F  N  L  T  Y  M  L  L  V  L  H  M  L  L  V  I  M  L  L  F  M  T  T  *  T  K  V  L  L  G  K  R  F  R  I  P  F  V  *  L  E  T   </second_frame>
            <third_frame>   L  S  T  T  L  E  L  *  W  N  F  L  S  S  C  F  S  H  S  N  Y  Y  S  F  Q  D  S  A  F  F  P  L  L  C  L  A  F  S  T  Y  F  L  L  F  R  S  Q  V  L  H  F  A  F  P  L  *  I  S  C  F  V  A  K  F  R  K  *  Q  S  F  L  E  M  A  G  R  Y  D  H  N  P  F  E  E  E  E  E  V  N  P  F  A  :  D  G  G  G  R  G  K  S  S  G  Q  S  K  F  S  G  G  A  F  Y  T  T  :  S  G  S  V  P  P  A  T  N  S  R  L  S  P  L  P  P  E  P  A  D  F  Y  D  R  N  A  S  I  D  I  P  L  D  S  A  S  :  D  L  K  K  K  E  K  E  L  Q  S  K  E  N  E  L  R  R  R  E  Q  :  D  L  K  R  R  E  D  A  A  A  R   : A  G  I  V  L  E  E  K  N  W  P  P  F  F  P  I  I  H  H  D  I  A  N  E  I  P  I  H  L  Q  K  L  Q  Y  V  A  F  T  T  F  L   : G  L  I  A  C  L  L  W  N  I  V  A  T  T  T  A  W  I  K  E  G   : D  V  K  I  W  F  L  S  I  I  Y  F  I  S  G  V  P  G  A  Y  F  M  W  Y  R  P  L  Y  R  A  F  R :   T  E  G  A  M  K  F  A  W  F  F  L  F  Y  L  :  V  H  I  V  F  C  V  F  A  A  V  A  P  P  V  V  F  R  G  K  S  L  T :   G  I  L  P  A  V  D  L  I  G  K  N  V  L  V  G  :  I  F  Y  F  I  G  F  G  L  F  C  L  E  S  L  L  S  I  W  V  I  Q  :  Q  V  Y  M  Y  F  R  G  S  G  K  A  A  Q  M  K  Q  E  A  A  R  G  A  L  R  A  A  I  *  L  K  E  M  F  L  V  E  G  C  *  I  C  F  W  *  L  Y  V  L  V  S  S  I  *  H  I  C  C  L  F  C  I  C  F  W  *  L  C  F  Y  L  *  L  L  R  P  K  C  C  *  E  K  D  L  E  F  L  L  F  N  W  R  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57708" stop="57782"/>
                    <exon start="59005" stop="59070"/>
                    <exon start="59445" stop="59555"/>
                    <exon start="59658" stop="59720"/>
                    <exon start="60585" stop="60618"/>
                    <exon start="61043" stop="61165"/>
                    <exon start="62021" stop="62083"/>
                    <exon start="62171" stop="62264"/>
                    <exon start="62520" stop="62565"/>
                    <exon start="62822" stop="62889"/>
                    <exon start="63132" stop="63180"/>
                    <exon start="63374" stop="63439"/>
                    <exon start="63536" stop="63622"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>942</number_coding_nucleotides>
                  <number_encoded_amino_acids>314</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QSFLEMAGRYDHNPFEEEEEVNPFADGGGRGKSSGQSKFSGGAFYTTSGSVPPATNSRLSPLPPEPADFYDRNASIDIPLDSASDLKKKEKELQSKENELRRREQDLKRREDAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQKLQYVAFTTFLGLIACLLWNIVATTTAWIKEGDVKIWFLSIIYFISGVPGAYFMWYRPLYRAFRTEGAMKFAWFFLFYLVHIVFCVFAAVAPPVVFRGKSLTGILPAVDLIGKNVLVGIFYFIGFGLFCLESLLSIWVIQQVYMYFRGSGKAAQMKQEAARGALRAAI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="64609" PGL_stop="65289"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64609" e_stop="65289"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="64609" e_stop="65289" e_length="681"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64609" stop="65289"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565657" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCACCATGAATTCTATTACTTGTATCATAAAAATGTAGAACTTAGCTAACATAATATATTGTTCCACATGACAAAACAAATACAACCAAACAACACATATTATAAGTAATATAAATATAACAAATAACTTACTTAGGTATATTTTATTTTTTTTTTGGGTGGGGTGGGGTTAACAATAAGCAAGACATTTCTTCTTGCAATCCATAGTACATCCACCAGATCCACCACCAAAACCATAACCTTTTCCAGCACTAGAATATGATTTATAACATTTTGCTGGACATATTAATTTCATACCAAAACATGGGCCTTTTACTTTACACACAACACTAGACCTTATGACTCCACCTTTTCCATATCCACCTTTTGGGCCTCCAAATCCACCACCAAATACTCCACCACCAAGCCCAGGAATATTAAACCCTCCACCAGGCCCAAATATCCCACCAAAACCCACATCGCCACCGTTATTATTTCTGACTTCGCCACTGCCTTTCTTTGTTTTTCCAACCCCGTGTTTATTCGGGTGAATGTGTCTTGTAGCAATGGTGGAATTGAATGTTATGATGAGCAATAGAGCTAAGAGAGTAATGGAGATTTTCTTCATTTTTTTTTTGGTGAAAGAGAGAGGAGAAGAATTGAGTAATATTTATGGGAAAAGAGAGAGTTATAAGGAGATGG</gDNA_template>
            <first_frame> S  P  *  I  L  L  L  V  S  *  K  C  R  T  *  L  T  *  Y  I  V  P  H  D  K  T  N  T  T  K  Q  H  I  L  *  V  I  *  I  *  Q  I  T  Y  L  G  I  F  Y  F  F  F  G  W  G  G  V  N  N  K  Q  D  I  S  S  C  N  P  *  Y  I  H  Q  I  H  H  Q  N  H  N  L  F  Q  H  *  N  M  I  Y  N  I  L  L  D  I  L  I  S  Y  Q  N  M  G  L  L  L  Y  T  Q  H  *  T  L  *  L  H  L  F  H  I  H  L  L  G  L  Q  I  H  H  Q  I  L  H  H  Q  A  Q  E  Y  *  T  L  H  Q  A  Q  I  S  H  Q  N  P  H  R  H  R  Y  Y  F  *  L  R  H  C  L  S  L  F  F  Q  P  R  V  Y  S  G  E  C  V  L  *  Q  W  W  N  *  M  L  *  *  A  I  E  L  R  E  *  W  R  F  S  S  F  F  F  W  *  K  R  E  E  K  N  *  V  I  F  M  G  K  E  R  V  I  R  R  W </first_frame>
            <second_frame>  H  H  E  F  Y  Y  L  Y  H  K  N  V  E  L  S  *  H  N  I  L  F  H  M  T  K  Q  I  Q  P  N  N  T  Y  Y  K  *  Y  K  Y  N  K  *  L  T  *  V  Y  F  I  F  F  L  G  G  V  G  L  T  I  S  K  T  F  L  L  A  I  H  S  T  S  T  R  S  T  T  K  T  I  T  F  S  S  T  R  I  *  F  I  T  F  C  W  T  Y  *  F  H  T  K  T  W  A  F  Y  F  T  H  N  T  R  P  Y  D  S  T  F  S  I  S  T  F  W  A  S  K  S  T  T  K  Y  S  T  T  K  P  R  N  I  K  P  S  T  R  P  K  Y  P  T  K  T  H  I  A  T  V  I  I  S  D  F  A  T  A  F  L  C  F  S  N  P  V  F  I  R  V  N  V  S  C  S  N  G  G  I  E  C  Y  D  E  Q  *  S  *  E  S  N  G  D  F  L  H  F  F  F  G  E  R  E  R  R  R  I  E  *  Y  L  W  E  K  R  E  L  *  G  D   </second_frame>
            <third_frame>   T  M  N  S  I  T  C  I  I  K  M  *  N  L  A  N  I  I  Y  C  S  T  *  Q  N  K  Y  N  Q  T  T  H  I  I  S  N  I  N  I  T  N  N  L  L  R  Y  I  L  F  F  F  W  V  G  W  G  *  Q  *  A  R  H  F  F  L  Q  S  I  V  H  P  P  D  P  P  P  K  P  *  P  F  P  A  L  E  Y  D  L  *  H  F  A  G  H  I  N  F  I  P  K  H  G  P  F  T  L  H  T  T  L  D  L  M  T  P  P  F  P  Y  P  P  F  G  P  P  N  P  P  P  N  T  P  P  P  S  P  G  I  L  N  P  P  P  G  P  N  I  P  P  K  P  T  S  P  P  L  L  F  L  T  S  P  L  P  F  F  V  F  P  T  P  C  L  F  G  *  M  C  L  V  A  M  V  E  L  N  V  M  M  S  N  R  A  K  R  V  M  E  I  F  F  I  F  F  L  V  K  E  R  G  E  E  L  S  N  I  Y  G  K  R  E  S  Y  K  E  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64898" stop="65185"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>285</number_coding_nucleotides>
                  <number_encoded_amino_acids>95</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FHTKTWAFYFTHNTRPYDSTFSISTFWASKSTTKYSTTKPRNIKPSTRPKYPTKTHIATVIISDFATAFLCFSNPVFIRVNVSCSNGGIECYDEQ*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64878" stop="65138"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HFAGHINFIPKHGPFTLHTTLDLMTPPFPYPPFGPPNPPPNTPPPSPGILNPPPGPNIPPKPTSPPLLFLTSPLPFFVFPTPCLFG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="70322" PGL_stop="67635"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="70322" e_stop="69923"/>
            <exon e_start="68585" e_stop="67901"/>
            <exon e_start="67664" e_stop="67635"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.951" e_score="0.998"/>
          <exon-intron don_prob="0.990" acc_prob="0.619" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="70322" e_stop="69923" e_length="400"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.951">
            <gDNA_intron_boundary i_start="69922" i_stop="68586" i_length="1337"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="68585" e_stop="67901" e_length="685"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.619">
            <gDNA_intron_boundary i_start="67900" i_stop="67665" i_length="236"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="67664" e_stop="67635" e_length="30"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70322" stop="69923"/>
              <exon start="68585" stop="67901"/>
              <exon start="67664" stop="67635"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571516" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCTTTATTCATCTATAAAAGAAAAAAAAACTAATCTTTATTATGTCTTCTTGTACTACTAGCTTTTCAACCAAAGTGTCACCAACTTTTAGGAAGAATGATATTTTCCTGAAAAAACAAATGTTGGGAACTATTTCTTTTTCTTCCAAGAAAGATTCTTACTTGGGTTTCACTGCCCAAACTAGTAGTCAAACAGATTTTGTGTCTGCAATGGATGAAGATTGTAAATTGGAATTGAAATCGAATTATATATCAGATGGGTATTGTAAAGAATTGGAGATTGCTGTAAGAGCTGTTCATATGGCTTGTTTGCTCTGCCAGAGGGTTCAAGAAAATTTGTTATCTGAAACCTCTGAACATGTTCATTCTAAGGAGGATGACTCTCCTGTCACAATTGCTG : ATTGGAGCGTCCAAGCAATTGTCAGCTGGGTACTGTCCGAGGCTTATGGCAGTAACGTCTCTATTGTTGCTGAAGAAGATGTAGAAGCTCTTTCCAAGGCTAGCGCAGCTGGTCTGTTAGAAGCAGTAGTAAGAACTGTGAATGAGTGTCTAGCCGATGCTCCTCGTTTTGGACTGAAAGGTCCTGGTACTGATCTGGATGCTAAAGCTGTTCTTGAGGCCATAAGTCGTTGCAGCTTAGCAGGTGCCAGAGGTAGCAAGTTTTGGGTACTGGATCCTGTTGATGGCACGTTGGGTTTCGTGCGTGGAGATCAATATGCCATTGCTTTGGCATTGATAGAAGACGGAGAACCTGTGCTTGGGGTTCTCGGATGTCCAAATTATCCTATGAAGAAGGAATGGCTTAGTTATCAAAATGGTTATAGGAGAATCTTATCTAGGTTGAGCTCCTCTACATCTGAATCTTCGGATAGAGGTTCTGTACTTTATGCAAGGAAAGGTGGCGGCAGGGCCTGGATGCAACCGTTACTGCGCGGAGAAAGTAAGTTTGTGTGGCCAAACGCTGCAAGGGAAATTAGAGTATCCTCCATCGATAACCCAGCACTAGCTACCTTTTGTGAACCAGTTGAGAAGGCAAATTCAAGCCATTCATTCACAGCAGGACTGGCTCATAGTGTTGGACTTCG : GAACCAGCCGTTACGTGTATACAGCATGGT</gDNA_template>
            <first_frame> F  F  I  H  L  *  K  K  K  K  L  I  F  I  M  S  S  C  T  T  S  F  S  T  K  V  S  P  T  F  R  K  N  D  I  F  L  K  K  Q  M  L  G  T  I  S  F  S  S  K  K  D  S  Y  L  G  F  T  A  Q  T  S  S  Q  T  D  F  V  S  A  M  D  E  D  C  K  L  E  L  K  S  N  Y  I  S  D  G  Y  C  K  E  L  E  I  A  V  R  A  V  H  M  A  C  L  L  C  Q  R  V  Q  E  N  L  L  S  E  T  S  E  H  V  H  S  K  E  D  D  S  P  V  T  I  A   : D  W  S  V  Q  A  I  V  S  W  V  L  S  E  A  Y  G  S  N  V  S  I  V  A  E  E  D  V  E  A  L  S  K  A  S  A  A  G  L  L  E  A  V  V  R  T  V  N  E  C  L  A  D  A  P  R  F  G  L  K  G  P  G  T  D  L  D  A  K  A  V  L  E  A  I  S  R  C  S  L  A  G  A  R  G  S  K  F  W  V  L  D  P  V  D  G  T  L  G  F  V  R  G  D  Q  Y  A  I  A  L  A  L  I  E  D  G  E  P  V  L  G  V  L  G  C  P  N  Y  P  M  K  K  E  W  L  S  Y  Q  N  G  Y  R  R  I  L  S  R  L  S  S  S  T  S  E  S  S  D  R  G  S  V  L  Y  A  R  K  G  G  G  R  A  W  M  Q  P  L  L  R  G  E  S  K  F  V  W  P  N  A  A  R  E  I  R  V  S  S  I  D  N  P  A  L  A  T  F  C  E  P  V  E  K  A  N  S  S  H  S  F  T  A  G  L  A  H  S  V  G  L  R :   N  Q  P  L  R  V  Y  S  M   </first_frame>
            <second_frame>  S  L  F  I  Y  K  R  K  K  N  *  S  L  L  C  L  L  V  L  L  A  F  Q  P  K  C  H  Q  L  L  G  R  M  I  F  S  *  K  N  K  C  W  E  L  F  L  F  L  P  R  K  I  L  T  W  V  S  L  P  K  L  V  V  K  Q  I  L  C  L  Q  W  M  K  I  V  N  W  N  *  N  R  I  I  Y  Q  M  G  I  V  K  N  W  R  L  L  *  E  L  F  I  W  L  V  C  S  A  R  G  F  K  K  I  C  Y  L  K  P  L  N  M  F  I  L  R  R  M  T  L  L  S  Q  L  L  :  I  G  A  S  K  Q  L  S  A  G  Y  C  P  R  L  M  A  V  T  S  L  L  L  L  K  K  M  *  K  L  F  P  R  L  A  Q  L  V  C  *  K  Q  *  *  E  L  *  M  S  V  *  P  M  L  L  V  L  D  *  K  V  L  V  L  I  W  M  L  K  L  F  L  R  P  *  V  V  A  A  *  Q  V  P  E  V  A  S  F  G  Y  W  I  L  L  M  A  R  W  V  S  C  V  E  I  N  M  P  L  L  W  H  *  *  K  T  E  N  L  C  L  G  F  S  D  V  Q  I  I  L  *  R  R  N  G  L  V  I  K  M  V  I  G  E  S  Y  L  G  *  A  P  L  H  L  N  L  R  I  E  V  L  Y  F  M  Q  G  K  V  A  A  G  P  G  C  N  R  Y  C  A  E  K  V  S  L  C  G  Q  T  L  Q  G  K  L  E  Y  P  P  S  I  T  Q  H  *  L  P  F  V  N  Q  L  R  R  Q  I  Q  A  I  H  S  Q  Q  D  W  L  I  V  L  D  F   : G  T  S  R  Y  V  Y  T  A  W  </second_frame>
            <third_frame>   L  Y  S  S  I  K  E  K  K  T  N  L  Y  Y  V  F  L  Y  Y  *  L  F  N  Q  S  V  T  N  F  *  E  E  *  Y  F  P  E  K  T  N  V  G  N  Y  F  F  F  F  Q  E  R  F  L  L  G  F  H  C  P  N  *  *  S  N  R  F  C  V  C  N  G  *  R  L  *  I  G  I  E  I  E  L  Y  I  R  W  V  L  *  R  I  G  D  C  C  K  S  C  S  Y  G  L  F  A  L  P  E  G  S  R  K  F  V  I  *  N  L  *  T  C  S  F  *  G  G  *  L  S  C  H  N  C  * :   L  E  R  P  S  N  C  Q  L  G  T  V  R  G  L  W  Q  *  R  L  Y  C  C  *  R  R  C  R  S  S  F  Q  G  *  R  S  W  S  V  R  S  S  S  K  N  C  E  *  V  S  S  R  C  S  S  F  W  T  E  R  S  W  Y  *  S  G  C  *  S  C  S  *  G  H  K  S  L  Q  L  S  R  C  Q  R  *  Q  V  L  G  T  G  S  C  *  W  H  V  G  F  R  A  W  R  S  I  C  H  C  F  G  I  D  R  R  R  R  T  C  A  W  G  S  R  M  S  K  L  S  Y  E  E  G  M  A  *  L  S  K  W  L  *  E  N  L  I  *  V  E  L  L  Y  I  *  I  F  G  *  R  F  C  T  L  C  K  E  R  W  R  Q  G  L  D  A  T  V  T  A  R  R  K  *  V  C  V  A  K  R  C  K  G  N  *  S  I  L  H  R  *  P  S  T  S  Y  L  L  *  T  S  *  E  G  K  F  K  P  F  I  H  S  R  T  G  S  *  C  W  T  S  :  E  P  A  V  T  C  I  Q  H  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70304" stop="69923"/>
                    <exon start="68585" stop="67901"/>
                    <exon start="67664" stop="67637"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1095</number_coding_nucleotides>
                  <number_encoded_amino_acids>365</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKKKLIFIMSSCTTSFSTKVSPTFRKNDIFLKKQMLGTISFSSKKDSYLGFTAQTSSQTDFVSAMDEDCKLELKSNYISDGYCKELEIAVRAVHMACLLCQRVQENLLSETSEHVHSKEDDSPVTIADWSVQAIVSWVLSEAYGSNVSIVAEEDVEALSKASAAGLLEAVVRTVNECLADAPRFGLKGPGTDLDAKAVLEAISRCSLAGARGSKFWVLDPVDGTLGFVRGDQYAIALALIEDGEPVLGVLGCPNYPMKKEWLSYQNGYRRILSRLSSSTSESSDRGSVLYARKGGGRAWMQPLLRGESKFVWPNAAREIRVSSIDNPALATFCEPVEKANSSHSFTAGLAHSVGLRNQPLRVYSM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="76759" PGL_stop="75870"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="76759" e_stop="76609"/>
            <exon e_start="76530" e_stop="76387"/>
            <exon e_start="76294" e_stop="75870"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.972" acc_prob="0.991" e_score="0.980"/>
          <exon-intron don_prob="0.997" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="76759" e_stop="76609" e_length="151"/>
          </exon>
          <intron i_serial="1" don_prob="0.972" acc_prob="0.991">
            <gDNA_intron_boundary i_start="76608" i_stop="76531" i_length="78"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="76530" e_stop="76387" e_length="144"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.995">
            <gDNA_intron_boundary i_start="76386" i_stop="76295" i_length="92"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="76294" e_stop="75870" e_length="425"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76759" stop="76609"/>
              <exon start="76530" stop="76387"/>
              <exon start="76294" stop="75870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584717" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGACTAATGAATTCTGTCTGTTACTGATGTTCCTTTTTTCTAGATACGATCAGCAGCAAAGAAAGATCGTGATGTAATGGAGAAAGGACTCAGAGCCTTTGTATCATACATCCGTGCATATAAAGAGCACCACTGCTCTTACATCTTAAG : GTGGAAGGAGCTTGAGATCGGGAAGCTGGGCATGGGATATGGTCTTCTGCAGCTTCCTTCTGTGCCTGATGTGAAACATCATTCTCTTTCTACAAAGGGATTCACTGCTGTTGAAGATATCAACCTGGACAACATCAAGTTTAA : GGACAAGTCGAGAGAGAAGCAAAGAAAGAAAAATTTACAAGTGAAAAAAGCTGCAATGGCACAACAACAAGAACAGAAGACACAGAGACTTAAAAAAGAAGCAAACTCTACAGCAAGTGCCTTGAGAAAGAGAACTGCCAAACAAAGACGTGCTACACAGTTGGTTGAAGATGAAGATGAGATCACACGGGAGTACCGGTTATTGAAAAAGCTAAAAAAGGGAGCTATCGATGAGAATGAGTTTGCAAAATTGACTGGCACAGAAGACTTGCTTTCTGACATATGATTTAAACATCTAGGCACAAATTCTGCTGGTCTAATGCATTCATATGTGGTGGTGATTGCAGATGTTACACTAGTTACCAAGCAAAGAAAGATAAGTATATGTCTGGTCTGGTCACCCAGAAACTGAATTTCATCAAGCA</gDNA_template>
            <first_frame> L  T  N  E  F  C  L  L  L  M  F  L  F  S  R  Y  D  Q  Q  Q  R  K  I  V  M  *  W  R  K  D  S  E  P  L  Y  H  T  S  V  H  I  K  S  T  T  A  L  T  S  *   : G  G  R  S  L  R  S  G  S  W  A  W  D  M  V  F  C  S  F  L  L  C  L  M  *  N  I  I  L  F  L  Q  R  D  S  L  L  L  K  I  S  T  W  T  T  S  S  L   : R  T  S  R  E  R  S  K  E  R  K  I  Y  K  *  K  K  L  Q  W  H  N  N  K  N  R  R  H  R  D  L  K  K  K  Q  T  L  Q  Q  V  P  *  E  R  E  L  P  N  K  D  V  L  H  S  W  L  K  M  K  M  R  S  H  G  S  T  G  Y  *  K  S  *  K  R  E  L  S  M  R  M  S  L  Q  N  *  L  A  Q  K  T  C  F  L  T  Y  D  L  N  I  *  A  Q  I  L  L  V  *  C  I  H  M  W  W  *  L  Q  M  L  H  *  L  P  S  K  E  R  *  V  Y  V  W  S  G  H  P  E  T  E  F  H  Q  A </first_frame>
            <second_frame>  *  L  M  N  S  V  C  Y  *  C  S  F  F  L  D  T  I  S  S  K  E  R  S  *  C  N  G  E  R  T  Q  S  L  C  I  I  H  P  C  I  *  R  A  P  L  L  L  H  L  K  :  V  E  G  A  *  D  R  E  A  G  H  G  I  W  S  S  A  A  S  F  C  A  *  C  E  T  S  F  S  F  Y  K  G  I  H  C  C  *  R  Y  Q  P  G  Q  H  Q  V  *  :  G  Q  V  E  R  E  A  K  K  E  K  F  T  S  E  K  S  C  N  G  T  T  T  R  T  E  D  T  E  T  *  K  R  S  K  L  Y  S  K  C  L  E  K  E  N  C  Q  T  K  T  C  Y  T  V  G  *  R  *  R  *  D  H  T  G  V  P  V  I  E  K  A  K  K  G  S  Y  R  *  E  *  V  C  K  I  D  W  H  R  R  L  A  F  *  H  M  I  *  T  S  R  H  K  F  C  W  S  N  A  F  I  C  G  G  D  C  R  C  Y  T  S  Y  Q  A  K  K  D  K  Y  M  S  G  L  V  T  Q  K  L  N  F  I  K   </second_frame>
            <third_frame>   D  *  *  I  L  S  V  T  D  V  P  F  F  *  I  R  S  A  A  K  K  D  R  D  V  M  E  K  G  L  R  A  F  V  S  Y  I  R  A  Y  K  E  H  H  C  S  Y  I  L  R :   W  K  E  L  E  I  G  K  L  G  M  G  Y  G  L  L  Q  L  P  S  V  P  D  V  K  H  H  S  L  S  T  K  G  F  T  A  V  E  D  I  N  L  D  N  I  K  F  K :   D  K  S  R  E  K  Q  R  K  K  N  L  Q  V  K  K  A  A  M  A  Q  Q  Q  E  Q  K  T  Q  R  L  K  K  E  A  N  S  T  A  S  A  L  R  K  R  T  A  K  Q  R  R  A  T  Q  L  V  E  D  E  D  E  I  T  R  E  Y  R  L  L  K  K  L  K  K  G  A  I  D  E  N  E  F  A  K  L  T  G  T  E  D  L  L  S  D  I  *  F  K  H  L  G  T  N  S  A  G  L  M  H  S  Y  V  V  V  I  A  D  V  T  L  V  T  K  Q  R  K  I  S  I  C  L  V  W  S  P  R  N  *  I  S  S  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76715" stop="76609"/>
                    <exon start="76530" stop="76387"/>
                    <exon start="76294" stop="76009"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>534</number_coding_nucleotides>
                  <number_encoded_amino_acids>178</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IRSAAKKDRDVMEKGLRAFVSYIRAYKEHHCSYILRWKELEIGKLGMGYGLLQLPSVPDVKHHSLSTKGFTAVEDINLDNIKFKDKSREKQRKKNLQVKKAAMAQQQEQKTQRLKKEANSTASALRKRTAKQRRATQLVEDEDEITREYRLLKKLKKGAIDENEFAKLTGTEDLLSDI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="81667" PGL_stop="78558"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="81667" e_stop="81249"/>
            <exon e_start="80283" e_stop="80047"/>
            <exon e_start="79391" e_stop="79134"/>
            <exon e_start="79035" e_stop="78738"/>
            <exon e_start="78617" e_stop="78558"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.767" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="0.976"/>
          <exon-intron don_prob="0.998" acc_prob="0.875" e_score="0.997"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="81667" e_stop="81249" e_length="419"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="81248" i_stop="80284" i_length="965"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="80283" e_stop="80047" e_length="237"/>
          </exon>
          <intron i_serial="2" don_prob="0.964" acc_prob="0.767">
            <gDNA_intron_boundary i_start="80046" i_stop="79392" i_length="655"/>
          </intron>
          <exon e_serial="3" e_score="0.976">
            <gDNA_exon_boundary e_start="79391" e_stop="79134" e_length="258"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="79133" i_stop="79036" i_length="98"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="79035" e_stop="78738" e_length="298"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.875">
            <gDNA_intron_boundary i_start="78737" i_stop="78618" i_length="120"/>
          </intron>
          <exon e_serial="5" e_score="0.983">
            <gDNA_exon_boundary e_start="78617" e_stop="78558" e_length="60"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81667" stop="81249"/>
              <exon start="80283" stop="80047"/>
              <exon start="79391" stop="79147"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582888" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79153" stop="79134"/>
              <exon start="79035" stop="78738"/>
              <exon start="78617" stop="78558"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599135" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATGGGAAAGTAGAAATTATTTTTAATATACAAGAGTAAACCGGGTAGCAGCCAAACCGGACCGGAAAAACTTTGTAAATCGGTTCTTATTCGACTCGGTCGGTTGTAATTACTAGCACAGTTGGGTTGAAGAAAAACTAGCGAGTGCGGCGGGCATGGCGTCGGCGAATCAGAACAAAGCTTTAACGAATACTCGTTTCTCCGACCTCGAACCACGGCTTGCTGAGCCAGTTTTGGAAGCCCTAACCAACTCCGGCTTCGAGTTCTGTACTCCTGTTCAGGCCGCCACCATACCCTTACTCTGCAGCTACAAGGATGTCACCGTTGACGCCGCCACTGGCTCTGGTAAAACCCTAGCCTTCGTTTTACCTGTGGTTGAGATCATCCGTCGATCCTCTTCTAATCCCAAACCTCACAAG : GTAATGGGTATAATTATATCACCAACCAGGGAGTTGTCGTCACAAATATTTCATGTTGCTCAGCCATTCATTTCCACATTAGCAAATGTTAGGCCTATGCTTCTTGTTGGAGGATTAGAAGTAAAGGCAGATATCAAAAAGATAGAGGAGGAAGGAGCAAATTTGTTGATTGGGACACCTGGGAGGCTATATGACATAATGGAGCGCCTGGATATACTGGACTTTCGGGATCTTGAG : ATCCTGATATTAGACGAGGCTGATAGGCTATTAGGCATGGGATTCGAGAAGCAGCTAAATTCAATCATTTCTCGTTTACCTAAGCTTCGTAGAACGGGTCTCTTCTCTGCTACTCAAACTGAAGCAGTTGAAGAACTATCAAAGGCAGGATTGCGAAATCCTGTCAGGGTTGAAGTTCGGGCAGAAGCAAAACAGTTGAGCGGATCTGCATCTGGGAATTCGACCTCGTCAAAAACACCTTCTGGCCTTCATATTGAG : TATTTGGAATGTGAAGCGGACAAGAAATCATCGCAGCTTGTACACCTCATAACAAAGAACAAGTCAAAAAAAATTATAGTGTGAGCTTACTTTCCTGGAATCTTGAATTGTATATCATATATTTTTACATACCTGCATAGATGGTAGGAGATCACGTTGGTGTTTAGTACTTGGTATTTTTTACTCCTGCAGTTATTTCATGACTTGTGCTTGTGTTGATTATTGGGGAACTGTTCTTCCACGTCTCTCTTGTCTGAAAAGTTTTTCATTGATCTCTCTTCATGGAAGGATGAAGCAG : AGTGCAAGGGAGAAAGCACTAGCATCATTTACATCTCTTTCCAGTGGTGTTCTTTTATGC</gDNA_template>
            <first_frame> D  G  K  V  E  I  I  F  N  I  Q  E  *  T  G  *  Q  P  N  R  T  G  K  T  L  *  I  G  S  Y  S  T  R  S  V  V  I  T  S  T  V  G  L  K  K  N  *  R  V  R  R  A  W  R  R  R  I  R  T  K  L  *  R  I  L  V  S  P  T  S  N  H  G  L  L  S  Q  F  W  K  P  *  P  T  P  A  S  S  S  V  L  L  F  R  P  P  P  Y  P  Y  S  A  A  T  R  M  S  P  L  T  P  P  L  A  L  V  K  P  *  P  S  F  Y  L  W  L  R  S  S  V  D  P  L  L  I  P  N  L  T  R :   *  W  V  *  L  Y  H  Q  P  G  S  C  R  H  K  Y  F  M  L  L  S  H  S  F  P  H  *  Q  M  L  G  L  C  F  L  L  E  D  *  K  *  R  Q  I  S  K  R  *  R  R  K  E  Q  I  C  *  L  G  H  L  G  G  Y  M  T  *  W  S  A  W  I  Y  W  T  F  G  I  L  R :   S  *  Y  *  T  R  L  I  G  Y  *  A  W  D  S  R  S  S  *  I  Q  S  F  L  V  Y  L  S  F  V  E  R  V  S  S  L  L  L  K  L  K  Q  L  K  N  Y  Q  R  Q  D  C  E  I  L  S  G  L  K  F  G  Q  K  Q  N  S  *  A  D  L  H  L  G  I  R  P  R  Q  K  H  L  L  A  F  I  L  S :   I  W  N  V  K  R  T  R  N  H  R  S  L  Y  T  S  *  Q  R  T  S  Q  K  K  L  *  C  E  L  T  F  L  E  S  *  I  V  Y  H  I  F  L  H  T  C  I  D  G  R  R  S  R  W  C  L  V  L  G  I  F  Y  S  C  S  Y  F  M  T  C  A  C  V  D  Y  W  G  T  V  L  P  R  L  S  C  L  K  S  F  S  L  I  S  L  H  G  R  M  K  Q  :  S  A  R  E  K  A  L  A  S  F  T  S  L  S  S  G  V  L  L  C </first_frame>
            <second_frame>  M  G  K  *  K  L  F  L  I  Y  K  S  K  P  G  S  S  Q  T  G  P  E  K  L  C  K  S  V  L  I  R  L  G  R  L  *  L  L  A  Q  L  G  *  R  K  T  S  E  C  G  G  H  G  V  G  E  S  E  Q  S  F  N  E  Y  S  F  L  R  P  R  T  T  A  C  *  A  S  F  G  S  P  N  Q  L  R  L  R  V  L  Y  S  C  S  G  R  H  H  T  L  T  L  Q  L  Q  G  C  H  R  *  R  R  H  W  L  W  *  N  P  S  L  R  F  T  C  G  *  D  H  P  S  I  L  F  *  S  Q  T  S  Q   : G  N  G  Y  N  Y  I  T  N  Q  G  V  V  V  T  N  I  S  C  C  S  A  I  H  F  H  I  S  K  C  *  A  Y  A  S  C  W  R  I  R  S  K  G  R  Y  Q  K  D  R  G  G  R  S  K  F  V  D  W  D  T  W  E  A  I  *  H  N  G  A  P  G  Y  T  G  L  S  G  S  *   : D  P  D  I  R  R  G  *  *  A  I  R  H  G  I  R  E  A  A  K  F  N  H  F  S  F  T  *  A  S  *  N  G  S  L  L  C  Y  S  N  *  S  S  *  R  T  I  K  G  R  I  A  K  S  C  Q  G  *  S  S  G  R  S  K  T  V  E  R  I  C  I  W  E  F  D  L  V  K  N  T  F  W  P  S  Y  *   : V  F  G  M  *  S  G  Q  E  I  I  A  A  C  T  P  H  N  K  E  Q  V  K  K  N  Y  S  V  S  L  L  S  W  N  L  E  L  Y  I  I  Y  F  Y  I  P  A  *  M  V  G  D  H  V  G  V  *  Y  L  V  F  F  T  P  A  V  I  S  *  L  V  L  V  L  I  I  G  E  L  F  F  H  V  S  L  V  *  K  V  F  H  *  S  L  F  M  E  G  *  S  R :   V  Q  G  R  K  H  *  H  H  L  H  L  F  P  V  V  F  F  Y   </second_frame>
            <third_frame>   W  E  S  R  N  Y  F  *  Y  T  R  V  N  R  V  A  A  K  P  D  R  K  N  F  V  N  R  F  L  F  D  S  V  G  C  N  Y  *  H  S  W  V  E  E  K  L  A  S  A  A  G  M  A  S  A  N  Q  N  K  A  L  T  N  T  R  F  S  D  L  E  P  R  L  A  E  P  V  L  E  A  L  T  N  S  G  F  E  F  C  T  P  V  Q  A  A  T  I  P  L  L  C  S  Y  K  D  V  T  V  D  A  A  T  G  S  G  K  T  L  A  F  V  L  P  V  V  E  I  I  R  R  S  S  S  N  P  K  P  H  K  :  V  M  G  I  I  I  S  P  T  R  E  L  S  S  Q  I  F  H  V  A  Q  P  F  I  S  T  L  A  N  V  R  P  M  L  L  V  G  G  L  E  V  K  A  D  I  K  K  I  E  E  E  G  A  N  L  L  I  G  T  P  G  R  L  Y  D  I  M  E  R  L  D  I  L  D  F  R  D  L  E  :  I  L  I  L  D  E  A  D  R  L  L  G  M  G  F  E  K  Q  L  N  S  I  I  S  R  L  P  K  L  R  R  T  G  L  F  S  A  T  Q  T  E  A  V  E  E  L  S  K  A  G  L  R  N  P  V  R  V  E  V  R  A  E  A  K  Q  L  S  G  S  A  S  G  N  S  T  S  S  K  T  P  S  G  L  H  I  E  :  Y  L  E  C  E  A  D  K  K  S  S  Q  L  V  H  L  I  T  K  N  K  S  K  K  I  I  V  *  A  Y  F  P  G  I  L  N  C  I  S  Y  I  F  T  Y  L  H  R  W  *  E  I  T  L  V  F  S  T  W  Y  F  L  L  L  Q  L  F  H  D  L  C  L  C  *  L  L  G  N  C  S  S  T  S  L  L  S  E  K  F  F  I  D  L  S  S  W  K  D  E  A   : E  C  K  G  E  S  T  S  I  I  Y  I  S  F  Q  W  C  S  F  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81551" stop="81249"/>
                    <exon start="80283" stop="80047"/>
                    <exon start="79391" stop="79134"/>
                    <exon start="79035" stop="78952"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>879</number_coding_nucleotides>
                  <number_encoded_amino_acids>293</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HSWVEEKLASAAGMASANQNKALTNTRFSDLEPRLAEPVLEALTNSGFEFCTPVQAATIPLLCSYKDVTVDAATGSGKTLAFVLPVVEIIRRSSSNPKPHKVMGIIISPTRELSSQIFHVAQPFISTLANVRPMLLVGGLEVKADIKKIEEEGANLLIGTPGRLYDIMERLDILDFRDLEILILDEADRLLGMGFEKQLNSIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAEAKQLSGSASGNSTSSKTPSGLHIEYLECEADKKSSQLVHLITKNKSKKIIV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="78929" stop="78738"/>
                    <exon start="78617" stop="78558"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IVYHIFLHTCIDGRRSRWCLVLGIFYSCSYFMTCACVDYWGTVLPRLSCLKSFSLISLHGRMKQSAREKALASFTSLSSGVLLC</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="91546" PGL_stop="86389"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="91546" e_stop="91185"/>
            <exon e_start="89748" e_stop="89063"/>
            <exon e_start="88764" e_stop="88551"/>
            <exon e_start="88406" e_stop="88246"/>
            <exon e_start="88148" e_stop="87842"/>
            <exon e_start="87747" e_stop="87633"/>
            <exon e_start="87187" e_stop="87008"/>
            <exon e_start="86824" e_stop="86389"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="0.460" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.949" e_score="1.000"/>
          <exon-intron don_prob="0.954" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.907" acc_prob="0.905" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.963" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="91546" e_stop="91185" e_length="362"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="0.460">
            <gDNA_intron_boundary i_start="91184" i_stop="89749" i_length="1436"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="89748" e_stop="89063" e_length="686"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.949">
            <gDNA_intron_boundary i_start="89062" i_stop="88765" i_length="298"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="88764" e_stop="88551" e_length="214"/>
          </exon>
          <intron i_serial="3" don_prob="0.954" acc_prob="1.000">
            <gDNA_intron_boundary i_start="88550" i_stop="88407" i_length="144"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="88406" e_stop="88246" e_length="161"/>
          </exon>
          <intron i_serial="4" don_prob="0.988" acc_prob="0.980">
            <gDNA_intron_boundary i_start="88245" i_stop="88149" i_length="97"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="88148" e_stop="87842" e_length="307"/>
          </exon>
          <intron i_serial="5" don_prob="0.907" acc_prob="0.905">
            <gDNA_intron_boundary i_start="87841" i_stop="87748" i_length="94"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="87747" e_stop="87633" e_length="115"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.963">
            <gDNA_intron_boundary i_start="87632" i_stop="87188" i_length="445"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="87187" e_stop="87008" e_length="180"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="87007" i_stop="86825" i_length="183"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="86824" e_stop="86389" e_length="436"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91546" stop="91185"/>
              <exon start="89748" stop="89063"/>
              <exon start="88764" stop="88551"/>
              <exon start="88406" stop="88246"/>
              <exon start="88148" stop="87842"/>
              <exon start="87747" stop="87633"/>
              <exon start="87187" stop="87008"/>
              <exon start="86824" stop="86389"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568150" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGCACTCCTTAATTGACCTAAGAAAAAAACCAAAACGTGTCGTTTGTTCCACCGAAATGGCAGAGTTGCCTCTTTCATTTTGCCTTCATCTACAGTTGCATACATATTTTGCAGCAAATCACCCAAATGTTTAAATTATAGCAGTAGAGAACTTGTATTTGTGATTTCTCCATACCCTTTTTGTTTTACATTAGAAAAAAAAAATGCATCAGATTTTGACCAATATTTTCTTGCTGATCAAGGTTTTGTCTATATAAAATTAAAGAGGGTCTTTTTTTTGAAGTGTAAAAGTAATACTGTTGACTCCTAATATCCTGGAAAATTTCTTATGGGGTTTCATCTTCTTCTTTAAATTCCTAAAG : TGTCATTCTTAAACATTGCATACCATCTATAGTCCAAACAGTAATTGCCTTAATAAAAAATTTCAACAGTATCAGCTTCGGTAAGGGGTACTCTGAAAATGGCATTGGTAAGGGCTGCAAGGAGTAGCTTTAGGCGTTCTGGAGGTGCAATCGGAAACTATGCAAGTGAGAGAAATATATTCTGTGAAGGCATATCACCATTTAGACATCCTGCGCCAGTTTTTGAAAAAGCTGTAACAGGTTTCAATTCATCATACATTCCAAGTACCCAGATGATAAATCAATTAAGTTTCGGGAACAGAGGAATGAAGTTTACCCCTCAATATCAGTTTCCACATGCAGCAGCTGAGACGGTTGGGGGTGCTGATTCAAAGAATGAAAGATCCAGTTATCCAGGCCTTGAAGCAACAAAACAGGGCGAAAAACCTAGAGTAGTTGTTCTTGGATCTGGTTGGGCCGCTTGCAGATTCCTCAAAGGAATAGACACTAGTATGTATGATGTTGTTTGTATAGCACCAAGAAACCATATGGTCTTTACACCATTGCTTGCATCTACTTGTGTTGGAACATTGGAATTCCGATCAGTTGCTGAACCAGTCACCCAGATACAGAAAGCACTGGCAAAGGATCCAAATTCATATTTCTTCCTAGCATCCTGCACTGGTGTTGATGCTGATAAACATGAA : GTATACTGTGAAACGGTTGGCGATCGTGGAGTCTCTCATGAGCATTACAGATTTAAGGTTGCATATGACAAGCTTGTCATTGCTTCTGGAGCTGAACCTTTGACCTTTGGCATAAAGGGAGTGGAGGAACATGCCTTCTTTCTCCGTGAAGTACAGAATGCCCAAGAAATCAGGAAGAAGCTTCTTATGAACTTGATGGTCTCAGAAACTCCAG : GCATCTCGGAAGAAGAGAAAGAGCGCTTGTTGCACTGTGTTGTGATTGGAGGTGGACCTACAGGGGTTGAATTCAGCGGGGAGCTAAGTGATTTTATTATGAGAGATGTACGCGAACGTTATGCTCATGTCAAAAACTACATTCATGTGACCCTCATTGAG : GCTAATGAGATTTTGTCTTCATTTGATGTTGGGTTGCGGGAGTATGCGACAAAGCATTTGACCAAGGTAATGAATCCTTCAATTGCTTTGCATCAAGAAAGAAGTTTCTTCAGTTTCTGTGAGCAAAATTTCATACATATCAGGTTGGTGTCCGCCTTGTTCATGGTGTTGTAAAAGAAGTACATCCAGATAAAATAGTTCTCAGTGATGGAAGTGATGTTCCATATGGCCTTCTCGTTTGGTCTACTGGAGTTGGTCCTTCCAATTTTGTTAAATCACTAAATGTTCCCAAGTCTCCTGGTGGAAG : GATTGGAATTGATGAATGGTTGCGAGTTCCTTCCGTAGAAGATGTGTTTGCTATAGGAGATTGTGCTGGTTTTCTTGAACAGACTGGAAAGCCGGTGCTTCCGGCTCTTGCTCAG : GTTGCTGAAAGGCAAGGGAAGTATCTTGTTAAATTGTTCACCGACATTGGGAAACAGAATGGAGGCAAAGCTCTCTCAGCCAAAGACATCACTCTAGGAGATCCATTTGTTTACAAGCATCTTGGAAGCATGGCAACTGTGGGGCGTTACAAGGCTCTTGTTGATCTCCGTCAAGCTAAG : GGTGAGAAGGGTGTCTCATTAGCAGGCTTCACGAGCTGGCTTATTTGGCGGTCCGCGTATCTGACTCGAGTTATCAGCTGGAGGAACAGGTTTTACGTGGCTATGAACTGGGGAACAACGTTAATCTTTGGCAGAGACAATACTAAGATAGGATAAACTACCACTTCTAGTAGGATTTTCATGTTCTTGATCCATTTTTTGAACACTTCTAATAACCTACCTTGTAGTGTTATCAATAATGTTAATATCTTTGAGGATTGAAAAAGAAAAGGGGGAAAAAGTGCTTTGTCAAAATGGAATTATGAGGGTTGGGGCAAGGGATCTTTGACGACGTTAGAGTTATAATGTTACATCATTTCAAAACGTTATTAAATATTATGTCACATATTATTTTTGTTAAGTATTCATAACAATATTTCAAAGAACATGGAACATT</gDNA_template>
            <first_frame> S  T  P  *  L  T  *  E  K  N  Q  N  V  S  F  V  P  P  K  W  Q  S  C  L  F  H  F  A  F  I  Y  S  C  I  H  I  L  Q  Q  I  T  Q  M  F  K  L  *  Q  *  R  T  C  I  C  D  F  S  I  P  F  L  F  Y  I  R  K  K  K  C  I  R  F  *  P  I  F  S  C  *  S  R  F  C  L  Y  K  I  K  E  G  L  F  F  E  V  *  K  *  Y  C  *  L  L  I  S  W  K  I  S  Y  G  V  S  S  S  S  L  N  S  *  S :   V  I  L  K  H  C  I  P  S  I  V  Q  T  V  I  A  L  I  K  N  F  N  S  I  S  F  G  K  G  Y  S  E  N  G  I  G  K  G  C  K  E  *  L  *  A  F  W  R  C  N  R  K  L  C  K  *  E  K  Y  I  L  *  R  H  I  T  I  *  T  S  C  A  S  F  *  K  S  C  N  R  F  Q  F  I  I  H  S  K  Y  P  D  D  K  S  I  K  F  R  E  Q  R  N  E  V  Y  P  S  I  S  V  S  T  C  S  S  *  D  G  W  G  C  *  F  K  E  *  K  I  Q  L  S  R  P  *  S  N  K  T  G  R  K  T  *  S  S  C  S  W  I  W  L  G  R  L  Q  I  P  Q  R  N  R  H  *  Y  V  *  C  C  L  Y  S  T  K  K  P  Y  G  L  Y  T  I  A  C  I  Y  L  C  W  N  I  G  I  P  I  S  C  *  T  S  H  P  D  T  E  S  T  G  K  G  S  K  F  I  F  L  P  S  I  L  H  W  C  *  C  *  *  T  *   : S  I  L  *  N  G  W  R  S  W  S  L  S  *  A  L  Q  I  *  G  C  I  *  Q  A  C  H  C  F  W  S  *  T  F  D  L  W  H  K  G  S  G  G  T  C  L  L  S  P  *  S  T  E  C  P  R  N  Q  E  E  A  S  Y  E  L  D  G  L  R  N  S  R :   H  L  G  R  R  E  R  A  L  V  A  L  C  C  D  W  R  W  T  Y  R  G  *  I  Q  R  G  A  K  *  F  Y  Y  E  R  C  T  R  T  L  C  S  C  Q  K  L  H  S  C  D  P  H  *   : G  *  *  D  F  V  F  I  *  C  W  V  A  G  V  C  D  K  A  F  D  Q  G  N  E  S  F  N  C  F  A  S  R  K  K  F  L  Q  F  L  *  A  K  F  H  T  Y  Q  V  G  V  R  L  V  H  G  V  V  K  E  V  H  P  D  K  I  V  L  S  D  G  S  D  V  P  Y  G  L  L  V  W  S  T  G  V  G  P  S  N  F  V  K  S  L  N  V  P  K  S  P  G  G  R :   I  G  I  D  E  W  L  R  V  P  S  V  E  D  V  F  A  I  G  D  C  A  G  F  L  E  Q  T  G  K  P  V  L  P  A  L  A  Q  :  V  A  E  R  Q  G  K  Y  L  V  K  L  F  T  D  I  G  K  Q  N  G  G  K  A  L  S  A  K  D  I  T  L  G  D  P  F  V  Y  K  H  L  G  S  M  A  T  V  G  R  Y  K  A  L  V  D  L  R  Q  A  K  :  G  E  K  G  V  S  L  A  G  F  T  S  W  L  I  W  R  S  A  Y  L  T  R  V  I  S  W  R  N  R  F  Y  V  A  M  N  W  G  T  T  L  I  F  G  R  D  N  T  K  I  G  *  T  T  T  S  S  R  I  F  M  F  L  I  H  F  L  N  T  S  N  N  L  P  C  S  V  I  N  N  V  N  I  F  E  D  *  K  R  K  G  G  K  S  A  L  S  K  W  N  Y  E  G  W  G  K  G  S  L  T  T  L  E  L  *  C  Y  I  I  S  K  R  Y  *  I  L  C  H  I  L  F  L  L  S  I  H  N  N  I  S  K  N  M  E  H  </first_frame>
            <second_frame>  A  L  L  N  *  P  K  K  K  T  K  T  C  R  L  F  H  R  N  G  R  V  A  S  F  I  L  P  S  S  T  V  A  Y  I  F  C  S  K  S  P  K  C  L  N  Y  S  S  R  E  L  V  F  V  I  S  P  Y  P  F  C  F  T  L  E  K  K  N  A  S  D  F  D  Q  Y  F  L  A  D  Q  G  F  V  Y  I  K  L  K  R  V  F  F  L  K  C  K  S  N  T  V  D  S  *  Y  P  G  K  F  L  M  G  F  H  L  L  L  *  I  P  K   : V  S  F  L  N  I  A  Y  H  L  *  S  K  Q  *  L  P  *  *  K  I  S  T  V  S  A  S  V  R  G  T  L  K  M  A  L  V  R  A  A  R  S  S  F  R  R  S  G  G  A  I  G  N  Y  A  S  E  R  N  I  F  C  E  G  I  S  P  F  R  H  P  A  P  V  F  E  K  A  V  T  G  F  N  S  S  Y  I  P  S  T  Q  M  I  N  Q  L  S  F  G  N  R  G  M  K  F  T  P  Q  Y  Q  F  P  H  A  A  A  E  T  V  G  G  A  D  S  K  N  E  R  S  S  Y  P  G  L  E  A  T  K  Q  G  E  K  P  R  V  V  V  L  G  S  G  W  A  A  C  R  F  L  K  G  I  D  T  S  M  Y  D  V  V  C  I  A  P  R  N  H  M  V  F  T  P  L  L  A  S  T  C  V  G  T  L  E  F  R  S  V  A  E  P  V  T  Q  I  Q  K  A  L  A  K  D  P  N  S  Y  F  F  L  A  S  C  T  G  V  D  A  D  K  H  E  :  V  Y  C  E  T  V  G  D  R  G  V  S  H  E  H  Y  R  F  K  V  A  Y  D  K  L  V  I  A  S  G  A  E  P  L  T  F  G  I  K  G  V  E  E  H  A  F  F  L  R  E  V  Q  N  A  Q  E  I  R  K  K  L  L  M  N  L  M  V  S  E  T  P   : G  I  S  E  E  E  K  E  R  L  L  H  C  V  V  I  G  G  G  P  T  G  V  E  F  S  G  E  L  S  D  F  I  M  R  D  V  R  E  R  Y  A  H  V  K  N  Y  I  H  V  T  L  I  E  :  A  N  E  I  L  S  S  F  D  V  G  L  R  E  Y  A  T  K  H  L  T  K  V  M  N  P  S  I  A  L  H  Q  E  R  S  F  F  S  F  C  E  Q  N  F  I  H  I  R  L  V  S  A  L  F  M  V  L  *  K  K  Y  I  Q  I  K  *  F  S  V  M  E  V  M  F  H  M  A  F  S  F  G  L  L  E  L  V  L  P  I  L  L  N  H  *  M  F  P  S  L  L  V  E   : G  L  E  L  M  N  G  C  E  F  L  P  *  K  M  C  L  L  *  E  I  V  L  V  F  L  N  R  L  E  S  R  C  F  R  L  L  L  R :   L  L  K  G  K  G  S  I  L  L  N  C  S  P  T  L  G  N  R  M  E  A  K  L  S  Q  P  K  T  S  L  *  E  I  H  L  F  T  S  I  L  E  A  W  Q  L  W  G  V  T  R  L  L  L  I  S  V  K  L  R :   V  R  R  V  S  H  *  Q  A  S  R  A  G  L  F  G  G  P  R  I  *  L  E  L  S  A  G  G  T  G  F  T  W  L  *  T  G  E  Q  R  *  S  L  A  E  T  I  L  R  *  D  K  L  P  L  L  V  G  F  S  C  S  *  S  I  F  *  T  L  L  I  T  Y  L  V  V  L  S  I  M  L  I  S  L  R  I  E  K  E  K  G  E  K  V  L  C  Q  N  G  I  M  R  V  G  A  R  D  L  *  R  R  *  S  Y  N  V  T  S  F  Q  N  V  I  K  Y  Y  V  T  Y  Y  F  C  *  V  F  I  T  I  F  Q  R  T  W  N  I </second_frame>
            <third_frame>   H  S  L  I  D  L  R  K  K  P  K  R  V  V  C  S  T  E  M  A  E  L  P  L  S  F  C  L  H  L  Q  L  H  T  Y  F  A  A  N  H  P  N  V  *  I  I  A  V  E  N  L  Y  L  *  F  L  H  T  L  F  V  L  H  *  K  K  K  M  H  Q  I  L  T  N  I  F  L  L  I  K  V  L  S  I  *  N  *  R  G  S  F  F  *  S  V  K  V  I  L  L  T  P  N  I  L  E  N  F  L  W  G  F  I  F  F  F  K  F  L  K  :  C  H  S  *  T  L  H  T  I  Y  S  P  N  S  N  C  L  N  K  K  F  Q  Q  Y  Q  L  R  *  G  V  L  *  K  W  H  W  *  G  L  Q  G  V  A  L  G  V  L  E  V  Q  S  E  T  M  Q  V  R  E  I  Y  S  V  K  A  Y  H  H  L  D  I  L  R  Q  F  L  K  K  L  *  Q  V  S  I  H  H  T  F  Q  V  P  R  *  *  I  N  *  V  S  G  T  E  E  *  S  L  P  L  N  I  S  F  H  M  Q  Q  L  R  R  L  G  V  L  I  Q  R  M  K  D  P  V  I  Q  A  L  K  Q  Q  N  R  A  K  N  L  E  *  L  F  L  D  L  V  G  P  L  A  D  S  S  K  E  *  T  L  V  C  M  M  L  F  V  *  H  Q  E  T  I  W  S  L  H  H  C  L  H  L  L  V  L  E  H  W  N  S  D  Q  L  L  N  Q  S  P  R  Y  R  K  H  W  Q  R  I  Q  I  H  I  S  S  *  H  P  A  L  V  L  M  L  I  N  M  K :   Y  T  V  K  R  L  A  I  V  E  S  L  M  S  I  T  D  L  R  L  H  M  T  S  L  S  L  L  L  E  L  N  L  *  P  L  A  *  R  E  W  R  N  M  P  S  F  S  V  K  Y  R  M  P  K  K  S  G  R  S  F  L  *  T  *  W  S  Q  K  L  Q  :  A  S  R  K  K  R  K  S  A  C  C  T  V  L  *  L  E  V  D  L  Q  G  L  N  S  A  G  S  *  V  I  L  L  *  E  M  Y  A  N  V  M  L  M  S  K  T  T  F  M  *  P  S  L  R :   L  M  R  F  C  L  H  L  M  L  G  C  G  S  M  R  Q  S  I  *  P  R  *  *  I  L  Q  L  L  C  I  K  K  E  V  S  S  V  S  V  S  K  I  S  Y  I  S  G  W  C  P  P  C  S  W  C  C  K  R  S  T  S  R  *  N  S  S  Q  *  W  K  *  C  S  I  W  P  S  R  L  V  Y  W  S  W  S  F  Q  F  C  *  I  T  K  C  S  Q  V  S  W  W  K  :  D  W  N  *  *  M  V  A  S  S  F  R  R  R  C  V  C  Y  R  R  L  C  W  F  S  *  T  D  W  K  A  G  A  S  G  S  C  S   : G  C  *  K  A  R  E  V  S  C  *  I  V  H  R  H  W  E  T  E  W  R  Q  S  S  L  S  Q  R  H  H  S  R  R  S  I  C  L  Q  A  S  W  K  H  G  N  C  G  A  L  Q  G  S  C  *  S  P  S  S  *   : G  *  E  G  C  L  I  S  R  L  H  E  L  A  Y  L  A  V  R  V  S  D  S  S  Y  Q  L  E  E  Q  V  L  R  G  Y  E  L  G  N  N  V  N  L  W  Q  R  Q  Y  *  D  R  I  N  Y  H  F  *  *  D  F  H  V  L  D  P  F  F  E  H  F  *  *  P  T  L  *  C  Y  Q  *  C  *  Y  L  *  G  L  K  K  K  R  G  K  K  C  F  V  K  M  E  L  *  G  L  G  Q  G  I  F  D  D  V  R  V  I  M  L  H  H  F  K  T  L  L  N  I  M  S  H  I  I  F  V  K  Y  S  *  Q  Y  F  K  E  H  G  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89692" stop="89063"/>
                    <exon start="88764" stop="88551"/>
                    <exon start="88406" stop="88246"/>
                    <exon start="88148" stop="87975"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1176</number_coding_nucleotides>
                  <number_encoded_amino_acids>392</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KISTVSASVRGTLKMALVRAARSSFRRSGGAIGNYASERNIFCEGISPFRHPAPVFEKAVTGFNSSYIPSTQMINQLSFGNRGMKFTPQYQFPHAAAETVGGADSKNERSSYPGLEATKQGEKPRVVVLGSGWAACRFLKGIDTSMYDVVCIAPRNHMVFTPLLASTCVGTLEFRSVAEPVTQIQKALAKDPNSYFFLASCTGVDADKHEVYCETVGDRGVSHEHYRFKVAYDKLVIASGAEPLTFGIKGVEEHAFFLREVQNAQEIRKKLLMNLMVSETPGISEEEKERLLHCVVIGGGPTGVEFSGELSDFIMRDVRERYAHVKNYIHVTLIEANEILSSFDVGLREYATKHLTKVMNPSIALHQERSFFSFCEQNFIHIRLVSALFMVL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91530" stop="91237"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>291</number_coding_nucleotides>
                  <number_encoded_amino_acids>97</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PKKKTKTCRLFHRNGRVASFILPSSTVAYIFCSKSPKCLNYSSRELVFVISPYPFCFTLEKKNASDFDQYFLADQGFVYIKLKRVFFLKCKSNTVDS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="91213" e_stop="91041"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="91213" e_stop="91041" e_length="173"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91213" stop="91041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U601322" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTTCATCTTCTTCTTTAAATTCCTAAAGGTAATTCCTTTTTTTCTTGTTCTGATTTCTTGAGGCTTTTCTAATGTATATATACATATATTATGCTGGATCTTGATTGTACCATGTACAGTTTCATCATTATTGAAACTTATGTTGTGACCTTATGAGTATGTAATTAATCAT</gDNA_template>
            <first_frame> V  S  S  S  S  L  N  S  *  R  *  F  L  F  F  L  F  *  F  L  E  A  F  L  M  Y  I  Y  I  Y  Y  A  G  S  *  L  Y  H  V  Q  F  H  H  Y  *  N  L  C  C  D  L  M  S  M  *  L  I   </first_frame>
            <second_frame>  F  H  L  L  L  *  I  P  K  G  N  S  F  F  S  C  S  D  F  L  R  L  F  *  C  I  Y  T  Y  I  M  L  D  L  D  C  T  M  Y  S  F  I  I  I  E  T  Y  V  V  T  L  *  V  C  N  *  S  </second_frame>
            <third_frame>   F  I  F  F  F  K  F  L  K  V  I  P  F  F  L  V  L  I  S  *  G  F  S  N  V  Y  I  H  I  L  C  W  I  L  I  V  P  C  T  V  S  S  L  L  K  L  M  L  *  P  Y  E  Y  V  I  N  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0090O01.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="106239" PGL_stop="94731"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="106239" e_stop="106143"/>
            <exon e_start="106054" e_stop="105918"/>
            <exon e_start="104757" e_stop="104577"/>
            <exon e_start="104280" e_stop="104173"/>
            <exon e_start="104103" e_stop="104048"/>
            <exon e_start="102914" e_stop="102831"/>
            <exon e_start="102412" e_stop="102320"/>
            <exon e_start="101811" e_stop="101750"/>
            <exon e_start="101685" e_stop="101612"/>
            <exon e_start="97131" e_stop="96519"/>
            <exon e_start="96445" e_stop="96265"/>
            <exon e_start="96166" e_stop="96059"/>
            <exon e_start="95977" e_stop="95922"/>
            <exon e_start="95817" e_stop="95734"/>
            <exon e_start="95609" e_stop="95514"/>
            <exon e_start="95389" e_stop="95325"/>
            <exon e_start="95187" e_stop="95114"/>
            <exon e_start="95004" e_stop="94731"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.311" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.434" acc_prob="0.424" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.941" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.813" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.882" acc_prob="0.970" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.934" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.881" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.935" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.986" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="106239" e_stop="106143" e_length="97"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.998">
            <gDNA_intron_boundary i_start="106142" i_stop="106055" i_length="88"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="106054" e_stop="105918" e_length="137"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.999">
            <gDNA_intron_boundary i_start="105917" i_stop="104758" i_length="1160"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="104757" e_stop="104577" e_length="181"/>
          </exon>
          <intron i_serial="3" don_prob="0.311" acc_prob="0.995">
            <gDNA_intron_boundary i_start="104576" i_stop="104281" i_length="296"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="104280" e_stop="104173" e_length="108"/>
          </exon>
          <intron i_serial="4" don_prob="0.434" acc_prob="0.424">
            <gDNA_intron_boundary i_start="104172" i_stop="104104" i_length="69"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="104103" e_stop="104048" e_length="56"/>
          </exon>
          <intron i_serial="5" don_prob="0.991" acc_prob="0.988">
            <gDNA_intron_boundary i_start="104047" i_stop="102915" i_length="1133"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="102914" e_stop="102831" e_length="84"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.988">
            <gDNA_intron_boundary i_start="102830" i_stop="102413" i_length="418"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="102412" e_stop="102320" e_length="93"/>
          </exon>
          <intron i_serial="7" don_prob="0.941" acc_prob="0.994">
            <gDNA_intron_boundary i_start="102319" i_stop="101812" i_length="508"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="101811" e_stop="101750" e_length="62"/>
          </exon>
          <intron i_serial="8" don_prob="0.989" acc_prob="0.971">
            <gDNA_intron_boundary i_start="101749" i_stop="101686" i_length="64"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="101685" e_stop="101612" e_length="74"/>
          </exon>
          <intron i_serial="9" don_prob="0.999" acc_prob="0.992">
            <gDNA_intron_boundary i_start="101611" i_stop="97132" i_length="4480"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="97131" e_stop="96519" e_length="613"/>
          </exon>
          <intron i_serial="10" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="96518" i_stop="96446" i_length="73"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="96445" e_stop="96265" e_length="181"/>
          </exon>
          <intron i_serial="11" don_prob="0.813" acc_prob="0.973">
            <gDNA_intron_boundary i_start="96264" i_stop="96167" i_length="98"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="96166" e_stop="96059" e_length="108"/>
          </exon>
          <intron i_serial="12" don_prob="0.882" acc_prob="0.970">
            <gDNA_intron_boundary i_start="96058" i_stop="95978" i_length="81"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="95977" e_stop="95922" e_length="56"/>
          </exon>
          <intron i_serial="13" don_prob="0.997" acc_prob="0.999">
            <gDNA_intron_boundary i_start="95921" i_stop="95818" i_length="104"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="95817" e_stop="95734" e_length="84"/>
          </exon>
          <intron i_serial="14" don_prob="0.934" acc_prob="0.999">
            <gDNA_intron_boundary i_start="95733" i_stop="95610" i_length="124"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="95609" e_stop="95514" e_length="96"/>
          </exon>
          <intron i_serial="15" don_prob="0.881" acc_prob="0.980">
            <gDNA_intron_boundary i_start="95513" i_stop="95390" i_length="124"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="95389" e_stop="95325" e_length="65"/>
          </exon>
          <intron i_serial="16" don_prob="0.935" acc_prob="0.999">
            <gDNA_intron_boundary i_start="95324" i_stop="95188" i_length="137"/>
          </intron>
          <exon e_serial="17" e_score="1.000">
            <gDNA_exon_boundary e_start="95187" e_stop="95114" e_length="74"/>
          </exon>
          <intron i_serial="17" don_prob="0.997" acc_prob="0.986">
            <gDNA_intron_boundary i_start="95113" i_stop="95005" i_length="109"/>
          </intron>
          <exon e_serial="18" e_score="1.000">
            <gDNA_exon_boundary e_start="95004" e_stop="94731" e_length="274"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106239" stop="106143"/>
              <exon start="106054" stop="105918"/>
              <exon start="104757" stop="104577"/>
              <exon start="104280" stop="104173"/>
              <exon start="104103" stop="104048"/>
              <exon start="102914" stop="102831"/>
              <exon start="102412" stop="102320"/>
              <exon start="101811" stop="101750"/>
              <exon start="101685" stop="101612"/>
              <exon start="97131" stop="96519"/>
              <exon start="96445" stop="96265"/>
              <exon start="96166" stop="96059"/>
              <exon start="95977" stop="95922"/>
              <exon start="95817" stop="95734"/>
              <exon start="95609" stop="95514"/>
              <exon start="95389" stop="95325"/>
              <exon start="95187" stop="95114"/>
              <exon start="95004" stop="94731"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U569204" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGACTCTTCAGTTCAGTACCATTTCTAGGGTTTATTCCACCTCAAAAATTATTGTCATTCTTGGATCTTGAACCACCAAAACAACCCCTAGCTACTG : GTTGAGTAATTTGATTGGAAAAGATGGGTGGGTTTGAGCTCAAATGGTTTGTAGGAGTAGCTGTTGTTCTGATGATGGTTCAAAATATTCTTGGTTGGGGGAAAGAGGGACACTATATTATCTGCAAAATTGCTGAG : GAATATCTAACAGAAGATGCTTTAGCTGCAGTCAAAGCATTACTCCCAGATCAAGCCGAAGGTGATCTTGCAGCTGTCTGCTCCTGGCCTGATGAGGTTCGGCGCCACTACCACTACCGCTGGAGCTCTCCATTACATTATGTAGATACACCTGATTTCTTGTGCAATTACAAATATTGCC : GAGACTGCCATGACGGGCATGGGCTCAAGGACAGGTGTGTTACGGGAGCAATATACAACTACTCAATGCAACTTTCGCAGGGATATTATGATTTGAATTCAGAAAAAT : ACAACTTGACTGAAGCACTTATGTTCTTGTCTCATTTTGTTGGTGACGTACATCAG : CCTCTCCATGTTGGTTTCACTGGAGATCTTGGTGGAAACAGTATAATTGTTCGTTGGTACAGGAGGAAGACTAATTTGCACCAT : GTATGGGATAACATGATTATTGAATCTGCGTTGAAGACATACTACAAATCTGATATAATGTTAATGACACAAGTTCTTCTGAAAAACATCACT : CATGAATGGTCCGATGATGTTCCATCTTGGGAAGATTGCAAGGAGATGGTTTGTCCTGACCC : ATATGCTTCTGAAAGTATCCGTTTGGCCTGCAAATTTGCCTACAGAAATGCAACCCCGGGAAGCACTTTAACAG : ACGATTACTTCCTCTCTCGTCTTCCTGTTGTGGAGAAGAGGTTGGCACAAGGTGGGGTCCGCTTGGCCGAAGTTCTCAACAGAATTTTCACTAAAAAACCATCAGATGCTGCACAATGAAGATAAACTGCAGAAGAAAACCACTCTATGTATTCAATTATCCATTATAACTTGGAAGTTTCCCTCACGCCAAGAACTGAAACCTACTTAAGTGACTTATAAGTCAACTATTGTATTAAAATGGGTGTAATAAAATGTTACTTTAGATGCACAACTAGTCCATTATTACATGATAGATGCTACTATCATATTGGAATATGCTGTATGTTGCTTTTATGGATAATCAACCTCTATTTTACTTTTTAAGATAAGAGGAATCTTCAGCTTGTACACAACAAGAACCATTTCAACAGTTTTTGTATATATAGAACAAGTCCAAGTTTGGTGGGACACTTCCGGTTTTCGATATCTGTCAAGTTGTAGAACTTCTTTTGAGAATGTTGAGGTTAACTTCATTAAGCAGTATTTTCTTTCTCTGTGTTGCTTTTATCAACCAACATGGTGTTGAAGCATGGAGCAAAGAGGGGCATGTGATGACTTGTCGAATCGCGCAG : GGCTTGTTGAATGATGAGGCAGCTCATGCAGTCAAGATGTTGTTGCCGGAATATGTTAACGGTGACTTATCGGCCCTCTGTGTGTGGCCAGACCAAGTCAGGCACTGGTATAAGTATAAATGGACAAGCCCTCTACACTTCATTGATACACCAGATAAAGCTTGCAACTTTGATTATGAAA : GGGACTGTCATGATCAACATGGAGTAAAGGATATGTGTGTTGCTGGTGCAATTCAGAACTTTACTACTCAACTCTCTCATTACAGAGAGGGAACTTCTGATCGTCGAT : ATAATATGACAGAGGCTTTGCTGTTTTTGTCACATTTCATGGGAGATATCCATCAA : CCTATGCATGTTGGATTTACAAGTGATGCTGGAGGAAATTCTATTGATTTGCGCTGGTTTAGGCATAAATCAAACTTGCACCAT : GTGTGGGATAGGGAGATAATACTAACAGCTGCAAAAGACTACTATGCGAAGGATATAAACCTCCTTGAAGAAGACATTGAAGGGAACTTCACTGAC : GGAATTTGGTCTGATGATCTTGCTTCTTGGAGAGAATGTGGCAATGTCTTTTCTTGCGTAAACAA : GTTTGCAACGGAAAGTATAAATATAGCATGCAAATGGGGATACAAAGGTGTTGAAGCCGGTGAAACTTTATCAG : ATGATTACTTCAATTCAAGACTTCCAATAGTAATGAAACGAGTAGCACAAGGTGGAATAAGATTAGCGATGCTTTTAAACAACGTTTTTGGAGCTTCTCAACAAGAAGATTCAGTTGTTGCAACTTAATTACCAAATAATTTTAATAAAATAGTAATGAAAAACCATATATTACTTCATGTTTGACCAAAATAAAATAAAAACACTAAATTAGATGACACATCTTTGTTGTATTTAAATTCGTGTAAATTGTAATTACCCACAGAGATGTATTT</gDNA_template>
            <first_frame> *  L  F  S  S  V  P  F  L  G  F  I  P  P  Q  K  L  L  S  F  L  D  L  E  P  P  K  Q  P  L  A  T   : G  *  V  I  *  L  E  K  M  G  G  F  E  L  K  W  F  V  G  V  A  V  V  L  M  M  V  Q  N  I  L  G  W  G  K  E  G  H  Y  I  I  C  K  I  A  E  :  E  Y  L  T  E  D  A  L  A  A  V  K  A  L  L  P  D  Q  A  E  G  D  L  A  A  V  C  S  W  P  D  E  V  R  R  H  Y  H  Y  R  W  S  S  P  L  H  Y  V  D  T  P  D  F  L  C  N  Y  K  Y  C   : R  D  C  H  D  G  H  G  L  K  D  R  C  V  T  G  A  I  Y  N  Y  S  M  Q  L  S  Q  G  Y  Y  D  L  N  S  E  K   : Y  N  L  T  E  A  L  M  F  L  S  H  F  V  G  D  V  H  Q  :  P  L  H  V  G  F  T  G  D  L  G  G  N  S  I  I  V  R  W  Y  R  R  K  T  N  L  H  H  :  V  W  D  N  M  I  I  E  S  A  L  K  T  Y  Y  K  S  D  I  M  L  M  T  Q  V  L  L  K  N  I  T  :  H  E  W  S  D  D  V  P  S  W  E  D  C  K  E  M  V  C  P  D  P :   Y  A  S  E  S  I  R  L  A  C  K  F  A  Y  R  N  A  T  P  G  S  T  L  T   : D  D  Y  F  L  S  R  L  P  V  V  E  K  R  L  A  Q  G  G  V  R  L  A  E  V  L  N  R  I  F  T  K  K  P  S  D  A  A  Q  *  R  *  T  A  E  E  N  H  S  M  Y  S  I  I  H  Y  N  L  E  V  S  L  T  P  R  T  E  T  Y  L  S  D  L  *  V  N  Y  C  I  K  M  G  V  I  K  C  Y  F  R  C  T  T  S  P  L  L  H  D  R  C  Y  Y  H  I  G  I  C  C  M  L  L  L  W  I  I  N  L  Y  F  T  F  *  D  K  R  N  L  Q  L  V  H  N  K  N  H  F  N  S  F  C  I  Y  R  T  S  P  S  L  V  G  H  F  R  F  S  I  S  V  K  L  *  N  F  F  *  E  C  *  G  *  L  H  *  A  V  F  S  F  S  V  L  L  L  S  T  N  M  V  L  K  H  G  A  K  R  G  M  *  *  L  V  E  S  R  R :   A  C  *  M  M  R  Q  L  M  Q  S  R  C  C  C  R  N  M  L  T  V  T  Y  R  P  S  V  C  G  Q  T  K  S  G  T  G  I  S  I  N  G  Q  A  L  Y  T  S  L  I  H  Q  I  K  L  A  T  L  I  M  K  :  G  T  V  M  I  N  M  E  *  R  I  C  V  L  L  V  Q  F  R  T  L  L  L  N  S  L  I  T  E  R  E  L  L  I  V  D  :  I  I  *  Q  R  L  C  C  F  C  H  I  S  W  E  I  S  I  N :   L  C  M  L  D  L  Q  V  M  L  E  E  I  L  L  I  C  A  G  L  G  I  N  Q  T  C  T  M :   C  G  I  G  R  *  Y  *  Q  L  Q  K  T  T  M  R  R  I  *  T  S  L  K  K  T  L  K  G  T  S  L  T :   E  F  G  L  M  I  L  L  L  G  E  N  V  A  M  S  F  L  A  *  T   : S  L  Q  R  K  V  *  I  *  H  A  N  G  D  T  K  V  L  K  P  V  K  L  Y  Q  :  M  I  T  S  I  Q  D  F  Q  *  *  *  N  E  *  H  K  V  E  *  D  *  R  C  F  *  T  T  F  L  E  L  L  N  K  K  I  Q  L  L  Q  L  N  Y  Q  I  I  L  I  K  *  *  *  K  T  I  Y  Y  F  M  F  D  Q  N  K  I  K  T  L  N  *  M  T  H  L  C  C  I  *  I  R  V  N  C  N  Y  P  Q  R  C  I  </first_frame>
            <second_frame>  D  S  S  V  Q  Y  H  F  *  G  L  F  H  L  K  N  Y  C  H  S  W  I  L  N  H  Q  N  N  P  *  L  L  :  V  E  *  F  D  W  K  R  W  V  G  L  S  S  N  G  L  *  E  *  L  L  F  *  *  W  F  K  I  F  L  V  G  G  K  R  D  T  I  L  S  A  K  L  L  R :   N  I  *  Q  K  M  L  *  L  Q  S  K  H  Y  S  Q  I  K  P  K  V  I  L  Q  L  S  A  P  G  L  M  R  F  G  A  T  T  T  T  A  G  A  L  H  Y  I  M  *  I  H  L  I  S  C  A  I  T  N  I  A  :  E  T  A  M  T  G  M  G  S  R  T  G  V  L  R  E  Q  Y  T  T  T  Q  C  N  F  R  R  D  I  M  I  *  I  Q  K  N  :  T  T  *  L  K  H  L  C  S  C  L  I  L  L  V  T  Y  I  S :   L  S  M  L  V  S  L  E  I  L  V  E  T  V  *  L  F  V  G  T  G  G  R  L  I  C  T  M :   Y  G  I  T  *  L  L  N  L  R  *  R  H  T  T  N  L  I  *  C  *  *  H  K  F  F  *  K  T  S  L :   M  N  G  P  M  M  F  H  L  G  K  I  A  R  R  W  F  V  L  T   : H  M  L  L  K  V  S  V  W  P  A  N  L  P  T  E  M  Q  P  R  E  A  L  *  Q  :  T  I  T  S  S  L  V  F  L  L  W  R  R  G  W  H  K  V  G  S  A  W  P  K  F  S  T  E  F  S  L  K  N  H  Q  M  L  H  N  E  D  K  L  Q  K  K  T  T  L  C  I  Q  L  S  I  I  T  W  K  F  P  S  R  Q  E  L  K  P  T  *  V  T  Y  K  S  T  I  V  L  K  W  V  *  *  N  V  T  L  D  A  Q  L  V  H  Y  Y  M  I  D  A  T  I  I  L  E  Y  A  V  C  C  F  Y  G  *  S  T  S  I  L  L  F  K  I  R  G  I  F  S  L  Y  T  T  R  T  I  S  T  V  F  V  Y  I  E  Q  V  Q  V  W  W  D  T  S  G  F  R  Y  L  S  S  C  R  T  S  F  E  N  V  E  V  N  F  I  K  Q  Y  F  L  S  L  C  C  F  Y  Q  P  T  W  C  *  S  M  E  Q  R  G  A  C  D  D  L  S  N  R  A   : G  L  V  E  *  *  G  S  S  C  S  Q  D  V  V  A  G  I  C  *  R  *  L  I  G  P  L  C  V  A  R  P  S  Q  A  L  V  *  V  *  M  D  K  P  S  T  L  H  *  Y  T  R  *  S  L  Q  L  *  L  *  K :   G  L  S  *  S  T  W  S  K  G  Y  V  C  C  W  C  N  S  E  L  Y  Y  S  T  L  S  L  Q  R  G  N  F  *  S  S  I :   *  Y  D  R  G  F  A  V  F  V  T  F  H  G  R  Y  P  S   : T  Y  A  C  W  I  Y  K  *  C  W  R  K  F  Y  *  F  A  L  V  *  A  *  I  K  L  A  P   : C  V  G  *  G  D  N  T  N  S  C  K  R  L  L  C  E  G  Y  K  P  P  *  R  R  H  *  R  E  L  H  *   : R  N  L  V  *  *  S  C  F  L  E  R  M  W  Q  C  L  F  L  R  K  Q  :  V  C  N  G  K  Y  K  Y  S  M  Q  M  G  I  Q  R  C  *  S  R  *  N  F  I  R :   *  L  L  Q  F  K  T  S  N  S  N  E  T  S  S  T  R  W  N  K  I  S  D  A  F  K  Q  R  F  W  S  F  S  T  R  R  F  S  C  C  N  L  I  T  K  *  F  *  *  N  S  N  E  K  P  Y  I  T  S  C  L  T  K  I  K  *  K  H  *  I  R  *  H  I  F  V  V  F  K  F  V  *  I  V  I  T  H  R  D  V  F </second_frame>
            <third_frame>   T  L  Q  F  S  T  I  S  R  V  Y  S  T  S  K  I  I  V  I  L  G  S  *  T  T  K  T  T  P  S  Y  W :   L  S  N  L  I  G  K  D  G  W  V  *  A  Q  M  V  C  R  S  S  C  C  S  D  D  G  S  K  Y  S  W  L  G  E  R  G  T  L  Y  Y  L  Q  N  C  *   : G  I  S  N  R  R  C  F  S  C  S  Q  S  I  T  P  R  S  S  R  R  *  S  C  S  C  L  L  L  A  *  *  G  S  A  P  L  P  L  P  L  E  L  S  I  T  L  C  R  Y  T  *  F  L  V  Q  L  Q  I  L  P :   R  L  P  *  R  A  W  A  Q  G  Q  V  C  Y  G  S  N  I  Q  L  L  N  A  T  F  A  G  I  L  *  F  E  F  R  K  I :   Q  L  D  *  S  T  Y  V  L  V  S  F  C  W  *  R  T  S   : A  S  P  C  W  F  H  W  R  S  W  W  K  Q  Y  N  C  S  L  V  Q  E  E  D  *  F  A  P   : C  M  G  *  H  D  Y  *  I  C  V  E  D  I  L  Q  I  *  Y  N  V  N  D  T  S  S  S  E  K  H  H   : S  *  M  V  R  *  C  S  I  L  G  R  L  Q  G  D  G  L  S  *  P  :  I  C  F  *  K  Y  P  F  G  L  Q  I  C  L  Q  K  C  N  P  G  K  H  F  N  R :   R  L  L  P  L  S  S  S  C  C  G  E  E  V  G  T  R  W  G  P  L  G  R  S  S  Q  Q  N  F  H  *  K  T  I  R  C  C  T  M  K  I  N  C  R  R  K  P  L  Y  V  F  N  Y  P  L  *  L  G  S  F  P  H  A  K  N  *  N  L  L  K  *  L  I  S  Q  L  L  Y  *  N  G  C  N  K  M  L  L  *  M  H  N  *  S  I  I  T  *  *  M  L  L  S  Y  W  N  M  L  Y  V  A  F  M  D  N  Q  P  L  F  Y  F  L  R  *  E  E  S  S  A  C  T  Q  Q  E  P  F  Q  Q  F  L  Y  I  *  N  K  S  K  F  G  G  T  L  P  V  F  D  I  C  Q  V  V  E  L  L  L  R  M  L  R  L  T  S  L  S  S  I  F  F  L  C  V  A  F  I  N  Q  H  G  V  E  A  W  S  K  E  G  H  V  M  T  C  R  I  A  Q  :  G  L  L  N  D  E  A  A  H  A  V  K  M  L  L  P  E  Y  V  N  G  D  L  S  A  L  C  V  W  P  D  Q  V  R  H  W  Y  K  Y  K  W  T  S  P  L  H  F  I  D  T  P  D  K  A  C  N  F  D  Y  E   : R  D  C  H  D  Q  H  G  V  K  D  M  C  V  A  G  A  I  Q  N  F  T  T  Q  L  S  H  Y  R  E  G  T  S  D  R  R   : Y  N  M  T  E  A  L  L  F  L  S  H  F  M  G  D  I  H  Q  :  P  M  H  V  G  F  T  S  D  A  G  G  N  S  I  D  L  R  W  F  R  H  K  S  N  L  H  H  :  V  W  D  R  E  I  I  L  T  A  A  K  D  Y  Y  A  K  D  I  N  L  L  E  E  D  I  E  G  N  F  T  D  :  G  I  W  S  D  D  L  A  S  W  R  E  C  G  N  V  F  S  C  V  N  K :   F  A  T  E  S  I  N  I  A  C  K  W  G  Y  K  G  V  E  A  G  E  T  L  S   : D  D  Y  F  N  S  R  L  P  I  V  M  K  R  V  A  Q  G  G  I  R  L  A  M  L  L  N  N  V  F  G  A  S  Q  Q  E  D  S  V  V  A  T  *  L  P  N  N  F  N  K  I  V  M  K  N  H  I  L  L  H  V  *  P  K  *  N  K  N  T  K  L  D  D  T  S  L  L  Y  L  N  S  C  K  L  *  L  P  T  E  M  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96704" stop="96519"/>
                    <exon start="96445" stop="96265"/>
                    <exon start="96166" stop="96059"/>
                    <exon start="95977" stop="95922"/>
                    <exon start="95817" stop="95734"/>
                    <exon start="95609" stop="95514"/>
                    <exon start="95389" stop="95325"/>
                    <exon start="95187" stop="95114"/>
                    <exon start="95004" stop="94877"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>975</number_coding_nucleotides>
                  <number_encoded_amino_acids>325</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKSKFGGTLPVFDICQVVELLLRMLRLTSLSSIFFLCVAFINQHGVEAWSKEGHVMTCRIAQGLLNDEAAHAVKMLLPEYVNGDLSALCVWPDQVRHWYKYKWTSPLHFIDTPDKACNFDYERDCHDQHGVKDMCVAGAIQNFTTQLSHYREGTSDRRYNMTEALLFLSHFMGDIHQPMHVGFTSDAGGNSIDLRWFRHKSNLHHVWDREIILTAAKDYYAKDINLLEEDIEGNFTDGIWSDDLASWRECGNVFSCVNKFATESINIACKWGYKGVEAGETLSDDYFNSRLPIVMKRVAQGGIRLAMLLNNVFGASQQEDSVVAT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="106040" stop="105918"/>
                    <exon start="104757" stop="104577"/>
                    <exon start="104280" stop="104173"/>
                    <exon start="104103" stop="104048"/>
                    <exon start="102914" stop="102831"/>
                    <exon start="102412" stop="102320"/>
                    <exon start="101811" stop="101750"/>
                    <exon start="101685" stop="101612"/>
                    <exon start="97131" stop="97013"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>897</number_coding_nucleotides>
                  <number_encoded_amino_acids>299</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LEKMGGFELKWFVGVAVVLMMVQNILGWGKEGHYIICKIAEEYLTEDALAAVKALLPDQAEGDLAAVCSWPDEVRRHYHYRWSSPLHYVDTPDFLCNYKYCRDCHDGHGLKDRCVTGAIYNYSMQLSQGYYDLNSEKYNLTEALMFLSHFVGDVHQPLHVGFTGDLGGNSIIVRWYRRKTNLHHVWDNMIIESALKTYYKSDIMLMTQVLLKNITHEWSDDVPSWEDCKEMVCPDPYASESIRLACKFAYRNATPGSTLTDDYFLSRLPVVEKRLAQGGVRLAEVLNRIFTKKPSDAAQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="109249" PGL_stop="113678"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="109249" e_stop="109631"/>
            <exon e_start="110776" e_stop="110955"/>
            <exon e_start="111163" e_stop="111244"/>
            <exon e_start="111317" e_stop="111424"/>
            <exon e_start="111673" e_stop="111831"/>
            <exon e_start="113246" e_stop="113678"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.970" e_score="0.995"/>
          <exon-intron don_prob="0.904" acc_prob="0.943" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.911" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="109249" e_stop="109631" e_length="383"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.970">
            <gDNA_intron_boundary i_start="109632" i_stop="110775" i_length="1144"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="110776" e_stop="110955" e_length="180"/>
          </exon>
          <intron i_serial="2" don_prob="0.904" acc_prob="0.943">
            <gDNA_intron_boundary i_start="110956" i_stop="111162" i_length="207"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="111163" e_stop="111244" e_length="82"/>
          </exon>
          <intron i_serial="3" don_prob="0.972" acc_prob="0.911">
            <gDNA_intron_boundary i_start="111245" i_stop="111316" i_length="72"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="111317" e_stop="111424" e_length="108"/>
          </exon>
          <intron i_serial="4" don_prob="0.993" acc_prob="0.998">
            <gDNA_intron_boundary i_start="111425" i_stop="111672" i_length="248"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="111673" e_stop="111831" e_length="159"/>
          </exon>
          <intron i_serial="5" don_prob="0.976" acc_prob="0.998">
            <gDNA_intron_boundary i_start="111832" i_stop="113245" i_length="1414"/>
          </intron>
          <exon e_serial="6" e_score="0.995">
            <gDNA_exon_boundary e_start="113246" e_stop="113678" e_length="433"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109249" stop="109631"/>
              <exon start="110776" stop="110955"/>
              <exon start="111163" stop="111244"/>
              <exon start="111317" stop="111417"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U592751" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109256" stop="109631"/>
              <exon start="110776" stop="110955"/>
              <exon start="111163" stop="111244"/>
              <exon start="111317" stop="111424"/>
              <exon start="111673" stop="111831"/>
              <exon start="113246" stop="113678"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U579777" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATGCAACTAGACAAAAAGTAGAGCGTTCAAGAACAAGAATGGAAACAAAATACAAGAAAGTCGTGTAAACCTCTCCAACTCTCTTTCCAAAACCTTGTTAACTCAGTGAGTAAAATTGATTGTGATTAAGGATGAAGGCTGTTGTAATCACAAGCCCTGGTGGTCCAGAAGTGTTGAAGCTTCAAGAAGTGGAAGACCCACAAATTAAAGATGATGAAATCTTGATTAAGATAGCAGCTACTGCCCTTAATAGAGCTGATACCCTTCAACGCCAAGGTAAATACCCACCCCCTAAAGGCGACAGTGAATACCCAGGTCTTGAATGTTCTGGAACTGTTGAAGCAGTCGGCAAGGAAGTTACTCGCTGGAAAATTGGTGATCAG : GTATGTGCTCTCATTGGTGGAGGTGGTTATGCGGAGAAAGTAGCTGTACCTACTGGACAAGTTCTTCCTATTCCATCAGGTGTGTCTTTACAAGATGCGGCTAGCTTTCCTGAAGTGGTGTGCACTGTTTGGTCGACCATTTTCATGACGAGCAAGCTTTCCTCTGGTGAAACGTTTCTG : ATACATGGAGGCTCTAGTGGAATTGGTACGTTTGCCATTCAAATGGCTAAGTGCCTTGGAGTCAAAGTTTTCATCACAGCAG : GAAGTGAGGAAAAACTTTCCGCATGCAAAGAACTCGGGGCTGATGTTTGCATCAATTACAAGACTGAAGACTTTGTTACACGCATCAAGGAAGAAACAGGAGGGAAAG : GTGTTGATGTCATACTAGATAATATAGGAGGTTCATACTTCCAACGGAACCTTGACAGCCTCAATGTTGATGGTAGGCTCTTCATTATTGGTTTTATGGGAGGAACAGTGACACAAGTAAATCTTGGCTGTTTGTTAGCAAGACGCCTTACAGTGCAGG : CTGCTGGCTTGCGTAGTAGAAGCCCAAAAAACAAAGCTCAAATTGTGAGAGAAGTGGAAAAAAATGTTTGGCCTGCAATTGCAGCAGGGAAGGTGAAACCGGTGGTGTACAAGTACTTCCCCTTAGCAGAAGCTGCTGAGGCTCACCAGTTAATGGAAAGCAGCAACCACATTGGAAAGATTCTGCTCACTGTTTGAATGTTGTAAAAGAGAGATTTTCTTGTTCTTAGTGTTAAAATAGCCTGTACTTACAGCCAGTCCCTCCCCCCCCCCCCCCTCCAAACATCTGCTGCATGTACACTTTGCAATGTTTCCAATAAAGCAAAACCTTTTTTATGATTTCTCACTTTCCATCTTCTGAGTGCTTTAAGTTTTCGACGATTTTTCGATGTATATGTTTGAAATTGAAAGTATTTTTTAGAAACAAATTTGAA</gDNA_template>
            <first_frame> M  Q  L  D  K  K  *  S  V  Q  E  Q  E  W  K  Q  N  T  R  K  S  C  K  P  L  Q  L  S  F  Q  N  L  V  N  S  V  S  K  I  D  C  D  *  G  *  R  L  L  *  S  Q  A  L  V  V  Q  K  C  *  S  F  K  K  W  K  T  H  K  L  K  M  M  K  S  *  L  R  *  Q  L  L  P  L  I  E  L  I  P  F  N  A  K  V  N  T  H  P  L  K  A  T  V  N  T  Q  V  L  N  V  L  E  L  L  K  Q  S  A  R  K  L  L  A  G  K  L  V  I  R :   Y  V  L  S  L  V  E  V  V  M  R  R  K  *  L  Y  L  L  D  K  F  F  L  F  H  Q  V  C  L  Y  K  M  R  L  A  F  L  K  W  C  A  L  F  G  R  P  F  S  *  R  A  S  F  P  L  V  K  R  F  * :   Y  M  E  A  L  V  E  L  V  R  L  P  F  K  W  L  S  A  L  E  S  K  F  S  S  Q  Q  :  E  V  R  K  N  F  P  H  A  K  N  S  G  L  M  F  A  S  I  T  R  L  K  T  L  L  H  A  S  R  K  K  Q  E  G  K  :  V  L  M  S  Y  *  I  I  *  E  V  H  T  S  N  G  T  L  T  A  S  M  L  M  V  G  S  S  L  L  V  L  W  E  E  Q  *  H  K  *  I  L  A  V  C  *  Q  D  A  L  Q  C  R  :  L  L  A  C  V  V  E  A  Q  K  T  K  L  K  L  *  E  K  W  K  K  M  F  G  L  Q  L  Q  Q  G  R  *  N  R  W  C  T  S  T  S  P  *  Q  K  L  L  R  L  T  S  *  W  K  A  A  T  T  L  E  R  F  C  S  L  F  E  C  C  K  R  E  I  F  L  F  L  V  L  K  *  P  V  L  T  A  S  P  S  P  P  P  P  S  K  H  L  L  H  V  H  F  A  M  F  P  I  K  Q  N  L  F  Y  D  F  S  L  S  I  F  *  V  L  *  V  F  D  D  F  S  M  Y  M  F  E  I  E  S  I  F  *  K  Q  I  *  </first_frame>
            <second_frame>  C  N  *  T  K  S  R  A  F  K  N  K  N  G  N  K  I  Q  E  S  R  V  N  L  S  N  S  L  S  K  T  L  L  T  Q  *  V  K  L  I  V  I  K  D  E  G  C  C  N  H  K  P  W  W  S  R  S  V  E  A  S  R  S  G  R  P  T  N  *  R  *  *  N  L  D  *  D  S  S  Y  C  P  *  *  S  *  Y  P  S  T  P  R  *  I  P  T  P  *  R  R  Q  *  I  P  R  S  *  M  F  W  N  C  *  S  S  R  Q  G  S  Y  S  L  E  N  W  *  S   : G  M  C  S  H  W  W  R  W  L  C  G  E  S  S  C  T  Y  W  T  S  S  S  Y  S  I  R  C  V  F  T  R  C  G  *  L  S  *  S  G  V  H  C  L  V  D  H  F  H  D  E  Q  A  F  L  W  *  N  V  S   : D  T  W  R  L  *  W  N  W  Y  V  C  H  S  N  G  *  V  P  W  S  Q  S  F  H  H  S  R :   K  *  G  K  T  F  R  M  Q  R  T  R  G  *  C  L  H  Q  L  Q  D  *  R  L  C  Y  T  H  Q  G  R  N  R  R  E  R :   C  *  C  H  T  R  *  Y  R  R  F  I  L  P  T  E  P  *  Q  P  Q  C  *  W  *  A  L  H  Y  W  F  Y  G  R  N  S  D  T  S  K  S  W  L  F  V  S  K  T  P  Y  S  A  G :   C  W  L  A  *  *  K  P  K  K  Q  S  S  N  C  E  R  S  G  K  K  C  L  A  C  N  C  S  R  E  G  E  T  G  G  V  Q  V  L  P  L  S  R  S  C  *  G  S  P  V  N  G  K  Q  Q  P  H  W  K  D  S  A  H  C  L  N  V  V  K  E  R  F  S  C  S  *  C  *  N  S  L  Y  L  Q  P  V  P  P  P  P  P  P  P  N  I  C  C  M  Y  T  L  Q  C  F  Q  *  S  K  T  F  F  M  I  S  H  F  P  S  S  E  C  F  K  F  S  T  I  F  R  C  I  C  L  K  L  K  V  F  F  R  N  K  F  E </second_frame>
            <third_frame>   A  T  R  Q  K  V  E  R  S  R  T  R  M  E  T  K  Y  K  K  V  V  *  T  S  P  T  L  F  P  K  P  C  *  L  S  E  *  N  *  L  *  L  R  M  K  A  V  V  I  T  S  P  G  G  P  E  V  L  K  L  Q  E  V  E  D  P  Q  I  K  D  D  E  I  L  I  K  I  A  A  T  A  L  N  R  A  D  T  L  Q  R  Q  G  K  Y  P  P  P  K  G  D  S  E  Y  P  G  L  E  C  S  G  T  V  E  A  V  G  K  E  V  T  R  W  K  I  G  D  Q  :  V  C  A  L  I  G  G  G  G  Y  A  E  K  V  A  V  P  T  G  Q  V  L  P  I  P  S  G  V  S  L  Q  D  A  A  S  F  P  E  V  V  C  T  V  W  S  T  I  F  M  T  S  K  L  S  S  G  E  T  F  L  :  I  H  G  G  S  S  G  I  G  T  F  A  I  Q  M  A  K  C  L  G  V  K  V  F  I  T  A   : G  S  E  E  K  L  S  A  C  K  E  L  G  A  D  V  C  I  N  Y  K  T  E  D  F  V  T  R  I  K  E  E  T  G  G  K   : G  V  D  V  I  L  D  N  I  G  G  S  Y  F  Q  R  N  L  D  S  L  N  V  D  G  R  L  F  I  I  G  F  M  G  G  T  V  T  Q  V  N  L  G  C  L  L  A  R  R  L  T  V  Q   : A  A  G  L  R  S  R  S  P  K  N  K  A  Q  I  V  R  E  V  E  K  N  V  W  P  A  I  A  A  G  K  V  K  P  V  V  Y  K  Y  F  P  L  A  E  A  A  E  A  H  Q  L  M  E  S  S  N  H  I  G  K  I  L  L  T  V  *  M  L  *  K  R  D  F  L  V  L  S  V  K  I  A  C  T  Y  S  Q  S  L  P  P  P  P  L  Q  T  S  A  A  C  T  L  C  N  V  S  N  K  A  K  P  F  L  *  F  L  T  F  H  L  L  S  A  L  S  F  R  R  F  F  D  V  Y  V  *  N  *  K  Y  F  L  E  T  N  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="109374" stop="109631"/>
                    <exon start="110776" stop="110955"/>
                    <exon start="111163" stop="111244"/>
                    <exon start="111317" stop="111424"/>
                    <exon start="111673" stop="111831"/>
                    <exon start="113246" stop="113442"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>981</number_coding_nucleotides>
                  <number_encoded_amino_acids>327</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LRMKAVVITSPGGPEVLKLQEVEDPQIKDDEILIKIAATALNRADTLQRQGKYPPPKGDSEYPGLECSGTVEAVGKEVTRWKIGDQVCALIGGGGYAEKVAVPTGQVLPIPSGVSLQDAASFPEVVCTVWSTIFMTSKLSSGETFLIHGGSSGIGTFAIQMAKCLGVKVFITAGSEEKLSACKELGADVCINYKTEDFVTRIKEETGGKGVDVILDNIGGSYFQRNLDSLNVDGRLFIIGFMGGTVTQVNLGCLLARRLTVQAAGLRSRSPKNKAQIVREVEKNVWPAIAAGKVKPVVYKYFPLAEAAEAHQLMESSNHIGKILLTV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="109270" e_stop="109996"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="109270" e_stop="109996" e_length="727"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109270" stop="109996"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U579868" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGCGTTCAAGAACAAGAATGGAAACAAAATACAAGAAAGTCGTGTAAACCTCTCCAACTCTCTTTCCAAAACCTTGTTAACTCAGTGAGTAAAATTGATTGTGATTAAGGATGAAGGCTGTTGTAATCACAAGCCCTGGTGGTCCAGAAGTGTTGAAGCTTCAAGAAGTGGAAGACCCACAAATTAAAGATGATGAAATCTTGATTAAGATAGCAGCTACTGCCCTTAATAGAGCTGATACCCTTCAACGCCAAGGTAAATACCCACCCCCTAAAGGCGACAGTGAATACCCAGGTCTTGAATGTTCTGGAACTGTTGAAGCAGTCGGCAAGGAAGTTACTCGCTGGAAAATTGGTGATCAGGTTTGTCTGATTACAGTTTCCATTTTTTTAAAAAAAGATGTCAACTTTATAATTGAAATTGAGGCTTAATTGTTGATTGTTGTTTATTCTCTTCATGTTGGGTAATATGACAGTGAGGAAGTTATCTGAAAATGCACAAATCGTTGAATTTATGGGACTAGGCTAAGAACAGACAGGGAACAAAGGAATAAGATATCTGAAAATGTCTAATCTTTGGAATCTTACTAGCTCCATTTCAATTTATTTTGTGTGTGTGTTTTTTCACTTGGCATCAAGTTTAAGAAAGTAAAGAGATACTTTTAATTTTAATTTTGAGGTTTTAAACTAAAATAGGTAGAGTGAACTAAAGTGTCTTTGGAAAAAAA</gDNA_template>
            <first_frame> S  V  Q  E  Q  E  W  K  Q  N  T  R  K  S  C  K  P  L  Q  L  S  F  Q  N  L  V  N  S  V  S  K  I  D  C  D  *  G  *  R  L  L  *  S  Q  A  L  V  V  Q  K  C  *  S  F  K  K  W  K  T  H  K  L  K  M  M  K  S  *  L  R  *  Q  L  L  P  L  I  E  L  I  P  F  N  A  K  V  N  T  H  P  L  K  A  T  V  N  T  Q  V  L  N  V  L  E  L  L  K  Q  S  A  R  K  L  L  A  G  K  L  V  I  R  F  V  *  L  Q  F  P  F  F  *  K  K  M  S  T  L  *  L  K  L  R  L  N  C  *  L  L  F  I  L  F  M  L  G  N  M  T  V  R  K  L  S  E  N  A  Q  I  V  E  F  M  G  L  G  *  E  Q  T  G  N  K  G  I  R  Y  L  K  M  S  N  L  W  N  L  T  S  S  I  S  I  Y  F  V  C  V  F  F  H  L  A  S  S  L  R  K  *  R  D  T  F  N  F  N  F  E  V  L  N  *  N  R  *  S  E  L  K  C  L  W  K  K  </first_frame>
            <second_frame>  A  F  K  N  K  N  G  N  K  I  Q  E  S  R  V  N  L  S  N  S  L  S  K  T  L  L  T  Q  *  V  K  L  I  V  I  K  D  E  G  C  C  N  H  K  P  W  W  S  R  S  V  E  A  S  R  S  G  R  P  T  N  *  R  *  *  N  L  D  *  D  S  S  Y  C  P  *  *  S  *  Y  P  S  T  P  R  *  I  P  T  P  *  R  R  Q  *  I  P  R  S  *  M  F  W  N  C  *  S  S  R  Q  G  S  Y  S  L  E  N  W  *  S  G  L  S  D  Y  S  F  H  F  F  K  K  R  C  Q  L  Y  N  *  N  *  G  L  I  V  D  C  C  L  F  S  S  C  W  V  I  *  Q  *  G  S  Y  L  K  M  H  K  S  L  N  L  W  D  *  A  K  N  R  Q  G  T  K  E  *  D  I  *  K  C  L  I  F  G  I  L  L  A  P  F  Q  F  I  L  C  V  C  F  F  T  W  H  Q  V  *  E  S  K  E  I  L  L  I  L  I  L  R  F  *  T  K  I  G  R  V  N  *  S  V  F  G  K  K </second_frame>
            <third_frame>   R  S  R  T  R  M  E  T  K  Y  K  K  V  V  *  T  S  P  T  L  F  P  K  P  C  *  L  S  E  *  N  *  L  *  L  R  M  K  A  V  V  I  T  S  P  G  G  P  E  V  L  K  L  Q  E  V  E  D  P  Q  I  K  D  D  E  I  L  I  K  I  A  A  T  A  L  N  R  A  D  T  L  Q  R  Q  G  K  Y  P  P  P  K  G  D  S  E  Y  P  G  L  E  C  S  G  T  V  E  A  V  G  K  E  V  T  R  W  K  I  G  D  Q  V  C  L  I  T  V  S  I  F  L  K  K  D  V  N  F  I  I  E  I  E  A  *  L  L  I  V  V  Y  S  L  H  V  G  *  Y  D  S  E  E  V  I  *  K  C  T  N  R  *  I  Y  G  T  R  L  R  T  D  R  E  Q  R  N  K  I  S  E  N  V  *  S  L  E  S  Y  *  L  H  F  N  L  F  C  V  C  V  F  S  L  G  I  K  F  K  K  V  K  R  Y  F  *  F  *  F  *  G  F  K  L  K  *  V  E  *  T  K  V  S  L  E  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="+"/>
                <serials PGL_serial="16" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="109374" stop="109700"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>324</number_coding_nucleotides>
                  <number_encoded_amino_acids>108</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LRMKAVVITSPGGPEVLKLQEVEDPQIKDDEILIKIAATALNRADTLQRQGKYPPPKGDSEYPGLECSGTVEAVGKEVTRWKIGDQVCLITVSIFLKKDVNFIIEIEA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="119920" PGL_stop="113942"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="119920" e_stop="119748"/>
            <exon e_start="119632" e_stop="119537"/>
            <exon e_start="119358" e_stop="119246"/>
            <exon e_start="119145" e_stop="119079"/>
            <exon e_start="118983" e_stop="118592"/>
            <exon e_start="118395" e_stop="118307"/>
            <exon e_start="118212" e_stop="118107"/>
            <exon e_start="118028" e_stop="117941"/>
            <exon e_start="117836" e_stop="117718"/>
            <exon e_start="117390" e_stop="117226"/>
            <exon e_start="117017" e_stop="116818"/>
            <exon e_start="116620" e_stop="116164"/>
            <exon e_start="116042" e_stop="115938"/>
            <exon e_start="115514" e_stop="115404"/>
            <exon e_start="115217" e_stop="115006"/>
            <exon e_start="114897" e_stop="114570"/>
            <exon e_start="114216" e_stop="113942"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.952" acc_prob="0.989" e_score="0.994"/>
          <exon-intron don_prob="0.768" acc_prob="0.789" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.766" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.293" acc_prob="0.818" e_score="0.992"/>
          <exon-intron don_prob="0.973" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.785" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.880" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.727" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.825" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.759" acc_prob="0.936" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.874" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.903" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="119920" e_stop="119748" e_length="173"/>
          </exon>
          <intron i_serial="1" don_prob="0.952" acc_prob="0.989">
            <gDNA_intron_boundary i_start="119747" i_stop="119633" i_length="115"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="119632" e_stop="119537" e_length="96"/>
          </exon>
          <intron i_serial="2" don_prob="0.768" acc_prob="0.789">
            <gDNA_intron_boundary i_start="119536" i_stop="119359" i_length="178"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="119358" e_stop="119246" e_length="113"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.766">
            <gDNA_intron_boundary i_start="119245" i_stop="119146" i_length="100"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="119145" e_stop="119079" e_length="67"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.988">
            <gDNA_intron_boundary i_start="119078" i_stop="118984" i_length="95"/>
          </intron>
          <exon e_serial="5" e_score="0.992">
            <gDNA_exon_boundary e_start="118983" e_stop="118592" e_length="392"/>
          </exon>
          <intron i_serial="5" don_prob="0.293" acc_prob="0.818">
            <gDNA_intron_boundary i_start="118591" i_stop="118396" i_length="196"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="118395" e_stop="118307" e_length="89"/>
          </exon>
          <intron i_serial="6" don_prob="0.973" acc_prob="1.000">
            <gDNA_intron_boundary i_start="118306" i_stop="118213" i_length="94"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="118212" e_stop="118107" e_length="106"/>
          </exon>
          <intron i_serial="7" don_prob="0.785" acc_prob="0.980">
            <gDNA_intron_boundary i_start="118106" i_stop="118029" i_length="78"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="118028" e_stop="117941" e_length="88"/>
          </exon>
          <intron i_serial="8" don_prob="0.880" acc_prob="0.997">
            <gDNA_intron_boundary i_start="117940" i_stop="117837" i_length="104"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="117836" e_stop="117718" e_length="119"/>
          </exon>
          <intron i_serial="9" don_prob="0.957" acc_prob="0.727">
            <gDNA_intron_boundary i_start="117717" i_stop="117391" i_length="327"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="117390" e_stop="117226" e_length="165"/>
          </exon>
          <intron i_serial="10" don_prob="0.964" acc_prob="0.825">
            <gDNA_intron_boundary i_start="117225" i_stop="117018" i_length="208"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="117017" e_stop="116818" e_length="200"/>
          </exon>
          <intron i_serial="11" don_prob="0.996" acc_prob="0.996">
            <gDNA_intron_boundary i_start="116817" i_stop="116621" i_length="197"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="116620" e_stop="116164" e_length="457"/>
          </exon>
          <intron i_serial="12" don_prob="0.995" acc_prob="0.971">
            <gDNA_intron_boundary i_start="116163" i_stop="116043" i_length="121"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="116042" e_stop="115938" e_length="105"/>
          </exon>
          <intron i_serial="13" don_prob="0.759" acc_prob="0.936">
            <gDNA_intron_boundary i_start="115937" i_stop="115515" i_length="423"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="115514" e_stop="115404" e_length="111"/>
          </exon>
          <intron i_serial="14" don_prob="0.960" acc_prob="0.990">
            <gDNA_intron_boundary i_start="115403" i_stop="115218" i_length="186"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="115217" e_stop="115006" e_length="212"/>
          </exon>
          <intron i_serial="15" don_prob="0.000" acc_prob="0.874">
            <gDNA_intron_boundary i_start="115005" i_stop="114898" i_length="108"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="114897" e_stop="114570" e_length="328"/>
          </exon>
          <intron i_serial="16" don_prob="0.996" acc_prob="0.903">
            <gDNA_intron_boundary i_start="114569" i_stop="114217" i_length="353"/>
          </intron>
          <exon e_serial="17" e_score="0.996">
            <gDNA_exon_boundary e_start="114216" e_stop="113942" e_length="275"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="119920" stop="119748"/>
              <exon start="119632" stop="119537"/>
              <exon start="119358" stop="119246"/>
              <exon start="119145" stop="119079"/>
              <exon start="118983" stop="118592"/>
              <exon start="118395" stop="118307"/>
              <exon start="118212" stop="118107"/>
              <exon start="118028" stop="117941"/>
              <exon start="117836" stop="117718"/>
              <exon start="117390" stop="117226"/>
              <exon start="117017" stop="116818"/>
              <exon start="116620" stop="116164"/>
              <exon start="116042" stop="115938"/>
              <exon start="115514" stop="115404"/>
              <exon start="115217" stop="115006"/>
              <exon start="114897" stop="114570"/>
              <exon start="114216" stop="113942"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576288" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTGAACTATGGAAAGTAAGAAATTGTTGTTGGTAATAATATTGTCTATGCTTTTAGTTTTTGAAAAAGGGGCGTCGACGACAGTAACTTATGATCACAAGGCATTGGTTATTGATGGAAAGAGGAGAATTTTGCAATCAGGATCAATACATTATCCAAGAACTACACCTGAA : ATATGGCCAGAGATCATTAGAAAGGCTAAGGAAGGCGGATTGGACGTGATAGAGAGTTATGTTTTCTGGAATTATCATGAACCTGTCAAAGGAGAG : TACTACTTTGAAGGCAGGTTTGACCTTGTACGGTTTGTGAAGACAGTACAAGAAGCTGGCCTATACGTGCATCTCCGTATAGGTCCATATGCCTGTGCTGAATGGAACTATGG : GGGCTTCCCTATGTGGCTACACTTTATCCCTGGAATAAAGTTTCGAACAACAAATGAACTTTTTAAG : AATGAAATGAAACTCTTTCTTGCCAAGATTGTTGATCTTATGAAGGATGAGAACCTCTTCGCTACACAAGGAGGTCCAATCATACTCGCTCAGGTTGTTTCTTTCATCTTTGTGATGATGGATGTCTTTGTGGTAGTTTAAATCTTCTTCCTTGAATCTACACTCTTATTACTTGATAGTGCACCTTCTTCTTTTCAATTTTAGTTGTTGCATTTTTTGTGTTAATCAGTGATCTATCCTCTTAACAGGTAGAAAATGAGTATGGAAATGTTGAATGGGCATATGGAGTCAGCGGAGAGCTATATGTAAAATGGGCTGCAGAAACTGCTGTTAATCTTAATACGACCGTCCCTTGGGTGATGTGTGCACAAGAAGATGCACCTGATTCAGTT : ATAAACACATGTAATGGATTCTATTGTGATCGCTTCACTCCAAATTCCCTGTCCAAGCCAAAGATGTGGACAGAAAACTACGTTGGATG : GTTCCTTGCATTTGGTTATCCTGTTCCTTTTCGACCTGTTGAAGACTTGGCTTTTGCTGTAGCACGTTTTTTTGAAACTGGTGGTACATTTCAAAATTATTACATG : TATTTTGGTGGCACCAATTTTGGTCGAACAGCTGGAGGTCCTCTAGTAGCAACAAGCTACGACTATGATGCCCCCATAGATGAGTATG : GTTTCATAAGTCAGCCAAAGTGGGGCCACCTACGCGATTTACACAAGGCTATAAAACACTGTGAAGAATATTTGGTCAATGCAGATCCAATTCATTTGTCCCTTGGTCTGAAACTTGAG : GCACATGTATATTACAAGAGCTCCAATGACTGTGCAGCCTTCCTTGCTAACTATGGTAACAGTTCAGATGCAAATGTTACATTTAATGGGAAGTCATATTTTCTTCATGCTTGGTCTGTTAGCATCCTTCCAGACTGTAAGAATGTCATATTCAACACGGCGAAG : GTTGTTTCACAAAAAACGACAGGAAGTACAGCATTTACTCACAACACGGTTACTATTGAAAATTCGCTGGAGTCAGATCCTTGGGGCTGGTACCAAGAAAAAGTTGGCATCGCGAATAATCATTCGTTTGCATCACCGCGCTTACTAGAGCAGATAAATACAACAAAGGATACCAGTGATTTCCTTTGGTATACAACAAG : TATAAATGTGGAGGAGAACATCAAGAAGAGGAAAGCCAAAGAATTGCAGTTAATGGTTGGAAGCTTAGGACATGCAGCTCTTGTTTTTGTAAACAAGAAACCAGTTGGTAACTAGCTCATCTAATCTCGTCTTCTTTAACCGTGTTTAATAACTTAGATAGGAACTCCAATTTGATCATAACAACAAAGTAAAAGTATAGTTTTTCTGATCGGTTAAGTTTTTTGATGAGGCGGTTCACACAACTCAACGGATCCAAGAAGAAGACTAATATGCTTCAGTTTTTACCTTGAACATTACTTAAGACTACAGAGAATTGCTAAGATAGCTGATTTGGAGCCTTCTTTAGGATTTGGCTATGGTAATCATGATGATGCAAGCTTTGTGCTAAGTAAGAAAATCCATCTTAAGCAAGGAAACAACACAGTGGACATATTGAGCATGATGGTTGGTTTGCAG : AACTATGGACCATGGTTTGACATCTCTGGAGCAGGTGTATTTTCTGTTATCTTCAGTGATTTGAAGAATTCCAAGAATTTTTCTTCTACAGAATGGATCTACCAG : GTAGGTCTTGAAGGTGAGTATCTTGGACTTGATAAAGTTAGTCTTGCAAATAGTTCTCTGTGGATTCAGGGGAGTTCTGTCCCAGTACATCAGAGTTTGATATGGTACAAG : ACAAGTTTTTCTCCTCCAGAAGGAAGAGGCCCTATATCGCTAAATCTGTCAAGTATGGGTAAAGGTCAGGCATGGGTAAATGGGCAGCATATAGGGAGATACTGGTCTTCTTATCGTTCACCCTCAACAGGCTGTTCTGATAATTGTGACTACAGAGGAGCTTATGATTCATGGAAATGTTTGAAGAAATGTGGTCAACCTGCTCAAGTGTT : GTACCATGTACCACGCAGTTGGTTAAAGCCAGAAAAGAACTTGCTTGTGCTGCATGAAGAGCTTGGTGGTGACCCTTCAAAAATATCTTTCTCAACGCGATCTGGGCAAACAATTTGTGCTCATGTATCTGAGTTAGATCCTCCACCTGTTGATACTTGGAAGACAGACAAAGATCAAACATCTCAAGAACCTTCATTGCAACTGAATTGTGAGCAAGGATGGACTATCACCGCAGTTAACTTTGCTAGCTTTGGAACTCCTACAGGAGATTGTGGAGCATTCATTGAAGGGAGTTGCCATTGGGATGTGTTATCCATAGTTCATCAG : GGGTGTGTGGGCAAGTCAGGATGTTCCATTCCTATCACCATGGCTAAACTTGGTGACCCATGTCCTGGAGTACAAAAAAGTCTGGCTGTTGAAGCTTTTTGCAGTGTTTGAATCATCAAATTCTATGGTTGGTGTAGTCATTAGCTTAGCGTGGTAACCTTCTTTGTCAAATTTTCTGCTTCTAGCAATCAAATGTACTGGTCTTTGTTTTAGCCAGAGCCAGCTTTACTTCGGTACAGCCCTAATCTTGATGATACAAAAGAGTTTATAAGTCA</gDNA_template>
            <first_frame> A  E  L  W  K  V  R  N  C  C  W  *  *  Y  C  L  C  F  *  F  L  K  K  G  R  R  R  Q  *  L  M  I  T  R  H  W  L  L  M  E  R  G  E  F  C  N  Q  D  Q  Y  I  I  Q  E  L  H  L  K :   Y  G  Q  R  S  L  E  R  L  R  K  A  D  W  T  *  *  R  V  M  F  S  G  I  I  M  N  L  S  K  E  S :   T  T  L  K  A  G  L  T  L  Y  G  L  *  R  Q  Y  K  K  L  A  Y  T  C  I  S  V  *  V  H  M  P  V  L  N  G  T  M   : G  A  S  L  C  G  Y  T  L  S  L  E  *  S  F  E  Q  Q  M  N  F  L  R :   M  K  *  N  S  F  L  P  R  L  L  I  L  *  R  M  R  T  S  S  L  H  K  E  V  Q  S  Y  S  L  R  L  F  L  S  S  L  *  *  W  M  S  L  W  *  F  K  S  S  S  L  N  L  H  S  Y  Y  L  I  V  H  L  L  L  F  N  F  S  C  C  I  F  C  V  N  Q  *  S  I  L  L  T  G  R  K  *  V  W  K  C  *  M  G  I  W  S  Q  R  R  A  I  C  K  M  G  C  R  N  C  C  *  S  *  Y  D  R  P  L  G  D  V  C  T  R  R  C  T  *  F  S   : Y  K  H  M  *  W  I  L  L  *  S  L  H  S  K  F  P  V  Q  A  K  D  V  D  R  K  L  R  W  M  :  V  P  C  I  W  L  S  C  S  F  S  T  C  *  R  L  G  F  C  C  S  T  F  F  *  N  W  W  Y  I  S  K  L  L  H   : V  F  W  W  H  Q  F  W  S  N  S  W  R  S  S  S  S  N  K  L  R  L  *  C  P  H  R  *  V  W :   F  H  K  S  A  K  V  G  P  P  T  R  F  T  Q  G  Y  K  T  L  *  R  I  F  G  Q  C  R  S  N  S  F  V  P  W  S  E  T  *   : G  T  C  I  L  Q  E  L  Q  *  L  C  S  L  P  C  *  L  W  *  Q  F  R  C  K  C  Y  I  *  W  E  V  I  F  S  S  C  L  V  C  *  H  P  S  R  L  *  E  C  H  I  Q  H  G  E   : G  C  F  T  K  N  D  R  K  Y  S  I  Y  S  Q  H  G  Y  Y  *  K  F  A  G  V  R  S  L  G  L  V  P  R  K  S  W  H  R  E  *  S  F  V  C  I  T  A  L  T  R  A  D  K  Y  N  K  G  Y  Q  *  F  P  L  V  Y  N  K  :  Y  K  C  G  G  E  H  Q  E  E  E  S  Q  R  I  A  V  N  G  W  K  L  R  T  C  S  S  C  F  C  K  Q  E  T  S  W  *  L  A  H  L  I  S  S  S  L  T  V  F  N  N  L  D  R  N  S  N  L  I  I  T  T  K  *  K  Y  S  F  S  D  R  L  S  F  L  M  R  R  F  T  Q  L  N  G  S  K  K  K  T  N  M  L  Q  F  L  P  *  T  L  L  K  T  T  E  N  C  *  D  S  *  F  G  A  F  F  R  I  W  L  W  *  S  *  *  C  K  L  C  A  K  *  E  N  P  S  *  A  R  K  Q  H  S  G  H  I  E  H  D  G  W  F  A   : E  L  W  T  M  V  *  H  L  W  S  R  C  I  F  C  Y  L  Q  *  F  E  E  F  Q  E  F  F  F  Y  R  M  D  L  P   : G  R  S  *  R  *  V  S  W  T  *  *  S  *  S  C  K  *  F  S  V  D  S  G  E  F  C  P  S  T  S  E  F  D  M  V  Q   : D  K  F  F  S  S  R  R  K  R  P  Y  I  A  K  S  V  K  Y  G  *  R  S  G  M  G  K  W  A  A  Y  R  E  I  L  V  F  L  S  F  T  L  N  R  L  F  *  *  L  *  L  Q  R  S  L  *  F  M  E  M  F  E  E  M  W  S  T  C  S  S  V  :  V  P  C  T  T  Q  L  V  K  A  R  K  E  L  A  C  A  A  *  R  A  W  W  *  P  F  K  N  I  F  L  N  A  I  W  A  N  N  L  C  S  C  I  *  V  R  S  S  T  C  *  Y  L  E  D  R  Q  R  S  N  I  S  R  T  F  I  A  T  E  L  *  A  R  M  D  Y  H  R  S  *  L  C  *  L  W  N  S  Y  R  R  L  W  S  I  H  *  R  E  L  P  L  G  C  V  I  H  S  S  S   : G  V  C  G  Q  V  R  M  F  H  S  Y  H  H  G  *  T  W  *  P  M  S  W  S  T  K  K  S  G  C  *  S  F  L  Q  C  L  N  H  Q  I  L  W  L  V  *  S  L  A  *  R  G  N  L  L  C  Q  I  F  C  F  *  Q  S  N  V  L  V  F  V  L  A  R  A  S  F  T  S  V  Q  P  *  S  *  *  Y  K  R  V  Y  K  S </first_frame>
            <second_frame>  L  N  Y  G  K  *  E  I  V  V  G  N  N  I  V  Y  A  F  S  F  *  K  R  G  V  D  D  S  N  L  *  S  Q  G  I  G  Y  *  W  K  E  E  N  F  A  I  R  I  N  T  L  S  K  N  Y  T  *   : N  M  A  R  D  H  *  K  G  *  G  R  R  I  G  R  D  R  E  L  C  F  L  E  L  S  *  T  C  Q  R  R   : V  L  L  *  R  Q  V  *  P  C  T  V  C  E  D  S  T  R  S  W  P  I  R  A  S  P  Y  R  S  I  C  L  C  *  M  E  L  W  :  G  L  P  Y  V  A  T  L  Y  P  W  N  K  V  S  N  N  K  *  T  F  *   : E  *  N  E  T  L  S  C  Q  D  C  *  S  Y  E  G  *  E  P  L  R  Y  T  R  R  S  N  H  T  R  S  G  C  F  F  H  L  C  D  D  G  C  L  C  G  S  L  N  L  L  P  *  I  Y  T  L  I  T  *  *  C  T  F  F  F  S  I  L  V  V  A  F  F  V  L  I  S  D  L  S  S  *  Q  V  E  N  E  Y  G  N  V  E  W  A  Y  G  V  S  G  E  L  Y  V  K  W  A  A  E  T  A  V  N  L  N  T  T  V  P  W  V  M  C  A  Q  E  D  A  P  D  S  V  :  I  N  T  C  N  G  F  Y  C  D  R  F  T  P  N  S  L  S  K  P  K  M  W  T  E  N  Y  V  G  W :   F  L  A  F  G  Y  P  V  P  F  R  P  V  E  D  L  A  F  A  V  A  R  F  F  E  T  G  G  T  F  Q  N  Y  Y  M  :  Y  F  G  G  T  N  F  G  R  T  A  G  G  P  L  V  A  T  S  Y  D  Y  D  A  P  I  D  E  Y   : G  F  I  S  Q  P  K  W  G  H  L  R  D  L  H  K  A  I  K  H  C  E  E  Y  L  V  N  A  D  P  I  H  L  S  L  G  L  K  L  E  :  A  H  V  Y  Y  K  S  S  N  D  C  A  A  F  L  A  N  Y  G  N  S  S  D  A  N  V  T  F  N  G  K  S  Y  F  L  H  A  W  S  V  S  I  L  P  D  C  K  N  V  I  F  N  T  A  K  :  V  V  S  Q  K  T  T  G  S  T  A  F  T  H  N  T  V  T  I  E  N  S  L  E  S  D  P  W  G  W  Y  Q  E  K  V  G  I  A  N  N  H  S  F  A  S  P  R  L  L  E  Q  I  N  T  T  K  D  T  S  D  F  L  W  Y  T  T  S :   I  N  V  E  E  N  I  K  K  R  K  A  K  E  L  Q  L  M  V  G  S  L  G  H  A  A  L  V  F  V  N  K  K  P  V  G  N  *  L  I  *  S  R  L  L  *  P  C  L  I  T  *  I  G  T  P  I  *  S  *  Q  Q  S  K  S  I  V  F  L  I  G  *  V  F  *  *  G  G  S  H  N  S  T  D  P  R  R  R  L  I  C  F  S  F  Y  L  E  H  Y  L  R  L  Q  R  I  A  K  I  A  D  L  E  P  S  L  G  F  G  Y  G  N  H  D  D  A  S  F  V  L  S  K  K  I  H  L  K  Q  G  N  N  T  V  D  I  L  S  M  M  V  G  L  Q  :  N  Y  G  P  W  F  D  I  S  G  A  G  V  F  S  V  I  F  S  D  L  K  N  S  K  N  F  S  S  T  E  W  I  Y  Q  :  V  G  L  E  G  E  Y  L  G  L  D  K  V  S  L  A  N  S  S  L  W  I  Q  G  S  S  V  P  V  H  Q  S  L  I  W  Y  K  :  T  S  F  S  P  P  E  G  R  G  P  I  S  L  N  L  S  S  M  G  K  G  Q  A  W  V  N  G  Q  H  I  G  R  Y  W  S  S  Y  R  S  P  S  T  G  C  S  D  N  C  D  Y  R  G  A  Y  D  S  W  K  C  L  K  K  C  G  Q  P  A  Q  V  L :   Y  H  V  P  R  S  W  L  K  P  E  K  N  L  L  V  L  H  E  E  L  G  G  D  P  S  K  I  S  F  S  T  R  S  G  Q  T  I  C  A  H  V  S  E  L  D  P  P  P  V  D  T  W  K  T  D  K  D  Q  T  S  Q  E  P  S  L  Q  L  N  C  E  Q  G  W  T  I  T  A  V  N  F  A  S  F  G  T  P  T  G  D  C  G  A  F  I  E  G  S  C  H  W  D  V  L  S  I  V  H  Q  :  G  C  V  G  K  S  G  C  S  I  P  I  T  M  A  K  L  G  D  P  C  P  G  V  Q  K  S  L  A  V  E  A  F  C  S  V  *  I  I  K  F  Y  G  W  C  S  H  *  L  S  V  V  T  F  F  V  K  F  S  A  S  S  N  Q  M  Y  W  S  L  F  *  P  E  P  A  L  L  R  Y  S  P  N  L  D  D  T  K  E  F  I  S   </second_frame>
            <third_frame>   *  T  M  E  S  K  K  L  L  L  V  I  I  L  S  M  L  L  V  F  E  K  G  A  S  T  T  V  T  Y  D  H  K  A  L  V  I  D  G  K  R  R  I  L  Q  S  G  S  I  H  Y  P  R  T  T  P  E  :  I  W  P  E  I  I  R  K  A  K  E  G  G  L  D  V  I  E  S  Y  V  F  W  N  Y  H  E  P  V  K  G  E  :  Y  Y  F  E  G  R  F  D  L  V  R  F  V  K  T  V  Q  E  A  G  L  Y  V  H  L  R  I  G  P  Y  A  C  A  E  W  N  Y  G :   G  F  P  M  W  L  H  F  I  P  G  I  K  F  R  T  T  N  E  L  F  K  :  N  E  M  K  L  F  L  A  K  I  V  D  L  M  K  D  E  N  L  F  A  T  Q  G  G  P  I  I  L  A  Q  V  V  S  F  I  F  V  M  M  D  V  F  V  V  V  *  I  F  F  L  E  S  T  L  L  L  L  D  S  A  P  S  S  F  Q  F  *  L  L  H  F  L  C  *  S  V  I  Y  P  L  N  R  *  K  M  S  M  E  M  L  N  G  H  M  E  S  A  E  S  Y  M  *  N  G  L  Q  K  L  L  L  I  L  I  R  P  S  L  G  *  C  V  H  K  K  M  H  L  I  Q  L :   *  T  H  V  M  D  S  I  V  I  A  S  L  Q  I  P  C  P  S  Q  R  C  G  Q  K  T  T  L  D   : G  S  L  H  L  V  I  L  F  L  F  D  L  L  K  T  W  L  L  L  *  H  V  F  L  K  L  V  V  H  F  K  I  I  T  C :   I  L  V  A  P  I  L  V  E  Q  L  E  V  L  *  *  Q  Q  A  T  T  M  M  P  P  *  M  S  M  :  V  S  *  V  S  Q  S  G  A  T  Y  A  I  Y  T  R  L  *  N  T  V  K  N  I  W  S  M  Q  I  Q  F  I  C  P  L  V  *  N  L  R :   H  M  Y  I  T  R  A  P  M  T  V  Q  P  S  L  L  T  M  V  T  V  Q  M  Q  M  L  H  L  M  G  S  H  I  F  F  M  L  G  L  L  A  S  F  Q  T  V  R  M  S  Y  S  T  R  R  R :   L  F  H  K  K  R  Q  E  V  Q  H  L  L  T  T  R  L  L  L  K  I  R  W  S  Q  I  L  G  A  G  T  K  K  K  L  A  S  R  I  I  I  R  L  H  H  R  A  Y  *  S  R  *  I  Q  Q  R  I  P  V  I  S  F  G  I  Q  Q   : V  *  M  W  R  R  T  S  R  R  G  K  P  K  N  C  S  *  W  L  E  A  *  D  M  Q  L  L  F  L  *  T  R  N  Q  L  V  T  S  S  S  N  L  V  F  F  N  R  V  *  *  L  R  *  E  L  Q  F  D  H  N  N  K  V  K  V  *  F  F  *  S  V  K  F  F  D  E  A  V  H  T  T  Q  R  I  Q  E  E  D  *  Y  A  S  V  F  T  L  N  I  T  *  D  Y  R  E  L  L  R  *  L  I  W  S  L  L  *  D  L  A  M  V  I  M  M  M  Q  A  L  C  *  V  R  K  S  I  L  S  K  E  T  T  Q  W  T  Y  *  A  *  W  L  V  C  R :   T  M  D  H  G  L  T  S  L  E  Q  V  Y  F  L  L  S  S  V  I  *  R  I  P  R  I  F  L  L  Q  N  G  S  T  R :   *  V  L  K  V  S  I  L  D  L  I  K  L  V  L  Q  I  V  L  C  G  F  R  G  V  L  S  Q  Y  I  R  V  *  Y  G  T  R :   Q  V  F  L  L  Q  K  E  E  A  L  Y  R  *  I  C  Q  V  W  V  K  V  R  H  G  *  M  G  S  I  *  G  D  T  G  L  L  I  V  H  P  Q  Q  A  V  L  I  I  V  T  T  E  E  L  M  I  H  G  N  V  *  R  N  V  V  N  L  L  K  C   : C  T  M  Y  H  A  V  G  *  S  Q  K  R  T  C  L  C  C  M  K  S  L  V  V  T  L  Q  K  Y  L  S  Q  R  D  L  G  K  Q  F  V  L  M  Y  L  S  *  I  L  H  L  L  I  L  G  R  Q  T  K  I  K  H  L  K  N  L  H  C  N  *  I  V  S  K  D  G  L  S  P  Q  L  T  L  L  A  L  E  L  L  Q  E  I  V  E  H  S  L  K  G  V  A  I  G  M  C  Y  P  *  F  I  R :   G  V  W  A  S  Q  D  V  P  F  L  S  P  W  L  N  L  V  T  H  V  L  E  Y  K  K  V  W  L  L  K  L  F  A  V  F  E  S  S  N  S  M  V  G  V  V  I  S  L  A  W  *  P  S  L  S  N  F  L  L  L  A  I  K  C  T  G  L  C  F  S  Q  S  Q  L  Y  F  G  T  A  L  I  L  M  I  Q  K  S  L  *  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="116391" stop="116164"/>
                    <exon start="116042" stop="115938"/>
                    <exon start="115514" stop="115404"/>
                    <exon start="115217" stop="115006"/>
                    <exon start="114897" stop="114570"/>
                    <exon start="114216" stop="114106"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1092</number_coding_nucleotides>
                  <number_encoded_amino_acids>364</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GGSHNSTDPRRRLICFSFYLEHYLRLQRIAKIADLEPSLGFGYGNHDDASFVLSKKIHLKQGNNTVDILSMMVGLQNYGPWFDISGAGVFSVIFSDLKNSKNFSSTEWIYQVGLEGEYLGLDKVSLANSSLWIQGSSVPVHQSLIWYKTSFSPPEGRGPISLNLSSMGKGQAWVNGQHIGRYWSSYRSPSTGCSDNCDYRGAYDSWKCLKKCGQPAQVLYHVPRSWLKPEKNLLVLHEELGGDPSKISFSTRSGQTICAHVSELDPPPVDTWKTDKDQTSQEPSLQLNCEQGWTITAVNFASFGTPTGDCGAFIEGSCHWDVLSIVHQGCVGKSGCSIPITMAKLGDPCPGVQKSLAVEAFCSV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="118738" stop="118592"/>
                    <exon start="118395" stop="118307"/>
                    <exon start="118212" stop="118107"/>
                    <exon start="118028" stop="117941"/>
                    <exon start="117836" stop="117718"/>
                    <exon start="117390" stop="117226"/>
                    <exon start="117017" stop="116818"/>
                    <exon start="116620" stop="116506"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1026</number_coding_nucleotides>
                  <number_encoded_amino_acids>342</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QVENEYGNVEWAYGVSGELYVKWAAETAVNLNTTVPWVMCAQEDAPDSVINTCNGFYCDRFTPNSLSKPKMWTENYVGWFLAFGYPVPFRPVEDLAFAVARFFETGGTFQNYYMYFGGTNFGRTAGGPLVATSYDYDAPIDEYGFISQPKWGHLRDLHKAIKHCEEYLVNADPIHLSLGLKLEAHVYYKSSNDCAAFLANYGNSSDANVTFNGKSYFLHAWSVSILPDCKNVIFNTAKVVSQKTTGSTAFTHNTVTIENSLESDPWGWYQEKVGIANNHSFASPRLLEQINTTKDTSDFLWYTTSINVEENIKKRKAKELQLMVGSLGHAALVFVNKKPVGN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="119915" stop="119748"/>
                    <exon start="119632" stop="119537"/>
                    <exon start="119358" stop="119246"/>
                    <exon start="119145" stop="119079"/>
                    <exon start="118983" stop="118843"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>582</number_coding_nucleotides>
                  <number_encoded_amino_acids>194</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TMESKKLLLVIILSMLLVFEKGASTTVTYDHKALVIDGKRRILQSGSIHYPRTTPEIWPEIIRKAKEGGLDVIESYVFWNYHEPVKGEYYFEGRFDLVRFVKTVQEAGLYVHLRIGPYACAEWNYGGFPMWLHFIPGIKFRTTNELFKNEMKLFLAKIVDLMKDENLFATQGGPIILAQVVSFIFVMMDVFVVV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="126535" PGL_stop="130991"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="126535" e_stop="127590"/>
            <exon e_start="127713" e_stop="127835"/>
            <exon e_start="128499" e_stop="128789"/>
            <exon e_start="130430" e_stop="130991"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.409" acc_prob="0.546" e_score="0.999"/>
          <exon-intron don_prob="0.989" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="126535" e_stop="127590" e_length="1056"/>
          </exon>
          <intron i_serial="1" don_prob="0.409" acc_prob="0.546">
            <gDNA_intron_boundary i_start="127591" i_stop="127712" i_length="122"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="127713" e_stop="127835" e_length="123"/>
          </exon>
          <intron i_serial="2" don_prob="0.989" acc_prob="0.992">
            <gDNA_intron_boundary i_start="127836" i_stop="128498" i_length="663"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="128499" e_stop="128789" e_length="291"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="128790" i_stop="130429" i_length="1640"/>
          </intron>
          <exon e_serial="4" e_score="0.998">
            <gDNA_exon_boundary e_start="130430" e_stop="130991" e_length="562"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126535" stop="127590"/>
              <exon start="127713" stop="127835"/>
              <exon start="128499" stop="128789"/>
              <exon start="130430" stop="130991"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585336" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTCACAATACTCTGCACGAATTTGTTGTCACTATCTTCATTCTTGATTTATTATACTGTAAGTAGTGCAATAATTTCCAGAAACATACTATTGTTTGATTCTTTCTTTGTTTTTGTGTTTTCGGTGTGATTGATGATAACTTTTCTACCATCTTCTTCGGTCTATGCGGATCTTGATAAATTTCTGGTGCCCCAGAAGTCAAAAGGGATATGGATATTTTTTGTATTTATTCAATTTGCTGTGTATTGGTTTGGTTTGGTTTTTTGTTTTTCAAGAAAACATTCTATTTTGATTCCTCAATTGTAAAATCTGTATTTTTAACTAAAAGTTCAATATGTACCTTGAATCTTGATTTAAAATCAAATTCTTGTTATATATCCGGTTCCGTAGAAGTCAAATGGATATGGGTGTTTTTTGTATTTATTGAATTTGCGATGTATTGGTTTGGGTTGTATTTTGTTTTTCAAGAAAACATCTTATTTTGATTCCCCCGAATGTAAAATCTGTATCTTTAACTAAAAATTCAACATGCCCCTTGAATCTTGATTTTAAATCAAATTGGTGGATAGATATCAAGCTCAAGTTTTCTCAAATTTGATATTCTGTTGAAGAGTTGTATGTTGGTAAATTTTGTGTGTGGTTCTCTGACCTTGATAAAATTGAGAATTGGTTTGCACGTTTAGTTGAAAAGTGCAGGCAGTTGAAAAATTGGTGAACACCAGTATAAAGGTCTTTGGTATTTGATTTGCAGGAGGAGCTTTGTGTTGTGTTCTTGCAAGGCTTGGTAAAATATGGACTTTGCTAGTATGGACCGTGCACAACTCACTATGGTGGGATCAGGATTTTCTGCTTTGCTTTCGATGCATTTCACGATACAGCTCTTGTCACAACACCTCTTCTTCTGGAAAAACCCAAAGGAGCAAAAGGCAATAATCATGATTATATGTATGGCTCCCCTTTATGCCATTGACTCGTTTGTGGGTTTGTTAGATATTCGTGGAAGCAAAACATTTTTCATGTTTCTAGACTCAGTTAAAGAATGCTATGAGGCTGTG : GCAATTGCCAAATTTTTGGCTTTGATGTATAGTTATTTGAATATATCCATCAGCAAAAACATTGTGCCTGATGAAATCAAGGGGAGGGAAATTCATCATTCCTTTCCGATGACTCTATTTCAG : CCTCGCACTGCTCACTTAGATCACCGGACACTGAAACTTCTCAAGCATTGGACATGGCAGTTTGTCATTATCCGTCCAGCATGCTCTATCTTGATGATCACGTTGCAGATTCTTGGGTTGTATCCGAATTGGCTCAGCTGGACGTTTACCATCATTCTCAATATTTCATTCTCAGTGGCCATGTACTCCTTGGTTGTTTTCTACCATGTTTTCTCAAAGGAACTGCAGCCACACAAACCACTTTCAAAGTTCATCTGCATTAAAGGGATAGTTTTCTTCAGCTTTTGGCAG : GGGTTGCTGGTTAAAATTCTAGTCTCGTGGGGAATTATCAAATCTCACCATTTTTGGTTGGATGTGGAGCACCTTCAGGAAGCCATTCAGAATGTTTTAATTTGTGTGGAGATGGTTTTCTTTTCTGTTATGCAGCAATATGCATACCACGTGGCTCCTTACAGTGGTGATGTCGAAGCAAAGTTGAAACTGAAAAAGGATGACTAAGTCGATGCACAAGACGTTGGTGTGAATAGACACTTTTCCTCTGTGATCTTGCATTTACCACCAGTCGCCGTGTGTAATGCAAGTTTTTATTGTTGTGTAACCTGTTGATACGGCTCAGGAAGGTCTTAAGATAACTAATTTTCGCGTGTGTTAGCAAAGAAGGAAATTTCTATCATTTCCTCTGATAACCAGTTTTTACTCTTTTGTGGTTAGACTTCTTGTAGTTATATCAGTAATTTTTCTTCATGAGAGGCTGGTGTCCCTGCCGGCACCTGCAACAAGCTTGATTGCGACTTTGTAAGTAATCATTTTCTTAATTATCTTGAGAATATCATGACTATGTGAATGCTCTAAT</gDNA_template>
            <first_frame> I  H  N  T  L  H  E  F  V  V  T  I  F  I  L  D  L  L  Y  C  K  *  C  N  N  F  Q  K  H  T  I  V  *  F  F  L  C  F  C  V  F  G  V  I  D  D  N  F  S  T  I  F  F  G  L  C  G  S  *  *  I  S  G  A  P  E  V  K  R  D  M  D  I  F  C  I  Y  S  I  C  C  V  L  V  W  F  G  F  L  F  F  K  K  T  F  Y  F  D  S  S  I  V  K  S  V  F  L  T  K  S  S  I  C  T  L  N  L  D  L  K  S  N  S  C  Y  I  S  G  S  V  E  V  K  W  I  W  V  F  F  V  F  I  E  F  A  M  Y  W  F  G  L  Y  F  V  F  Q  E  N  I  L  F  *  F  P  R  M  *  N  L  Y  L  *  L  K  I  Q  H  A  P  *  I  L  I  L  N  Q  I  G  G  *  I  S  S  S  S  F  L  K  F  D  I  L  L  K  S  C  M  L  V  N  F  V  C  G  S  L  T  L  I  K  L  R  I  G  L  H  V  *  L  K  S  A  G  S  *  K  I  G  E  H  Q  Y  K  G  L  W  Y  L  I  C  R  R  S  F  V  L  C  S  C  K  A  W  *  N  M  D  F  A  S  M  D  R  A  Q  L  T  M  V  G  S  G  F  S  A  L  L  S  M  H  F  T  I  Q  L  L  S  Q  H  L  F  F  W  K  N  P  K  E  Q  K  A  I  I  M  I  I  C  M  A  P  L  Y  A  I  D  S  F  V  G  L  L  D  I  R  G  S  K  T  F  F  M  F  L  D  S  V  K  E  C  Y  E  A  V  :  A  I  A  K  F  L  A  L  M  Y  S  Y  L  N  I  S  I  S  K  N  I  V  P  D  E  I  K  G  R  E  I  H  H  S  F  P  M  T  L  F  Q  :  P  R  T  A  H  L  D  H  R  T  L  K  L  L  K  H  W  T  W  Q  F  V  I  I  R  P  A  C  S  I  L  M  I  T  L  Q  I  L  G  L  Y  P  N  W  L  S  W  T  F  T  I  I  L  N  I  S  F  S  V  A  M  Y  S  L  V  V  F  Y  H  V  F  S  K  E  L  Q  P  H  K  P  L  S  K  F  I  C  I  K  G  I  V  F  F  S  F  W  Q  :  G  L  L  V  K  I  L  V  S  W  G  I  I  K  S  H  H  F  W  L  D  V  E  H  L  Q  E  A  I  Q  N  V  L  I  C  V  E  M  V  F  F  S  V  M  Q  Q  Y  A  Y  H  V  A  P  Y  S  G  D  V  E  A  K  L  K  L  K  K  D  D  *  V  D  A  Q  D  V  G  V  N  R  H  F  S  S  V  I  L  H  L  P  P  V  A  V  C  N  A  S  F  Y  C  C  V  T  C  *  Y  G  S  G  R  S  *  D  N  *  F  S  R  V  L  A  K  K  E  I  S  I  I  S  S  D  N  Q  F  L  L  F  C  G  *  T  S  C  S  Y  I  S  N  F  S  S  *  E  A  G  V  P  A  G  T  C  N  K  L  D  C  D  F  V  S  N  H  F  L  N  Y  L  E  N  I  M  T  M  *  M  L  *  </first_frame>
            <second_frame>  F  T  I  L  C  T  N  L  L  S  L  S  S  F  L  I  Y  Y  T  V  S  S  A  I  I  S  R  N  I  L  L  F  D  S  F  F  V  F  V  F  S  V  *  L  M  I  T  F  L  P  S  S  S  V  Y  A  D  L  D  K  F  L  V  P  Q  K  S  K  G  I  W  I  F  F  V  F  I  Q  F  A  V  Y  W  F  G  L  V  F  C  F  S  R  K  H  S  I  L  I  P  Q  L  *  N  L  Y  F  *  L  K  V  Q  Y  V  P  *  I  L  I  *  N  Q  I  L  V  I  Y  P  V  P  *  K  S  N  G  Y  G  C  F  L  Y  L  L  N  L  R  C  I  G  L  G  C  I  L  F  F  K  K  T  S  Y  F  D  S  P  E  C  K  I  C  I  F  N  *  K  F  N  M  P  L  E  S  *  F  *  I  K  L  V  D  R  Y  Q  A  Q  V  F  S  N  L  I  F  C  *  R  V  V  C  W  *  I  L  C  V  V  L  *  P  *  *  N  *  E  L  V  C  T  F  S  *  K  V  Q  A  V  E  K  L  V  N  T  S  I  K  V  F  G  I  *  F  A  G  G  A  L  C  C  V  L  A  R  L  G  K  I  W  T  L  L  V  W  T  V  H  N  S  L  W  W  D  Q  D  F  L  L  C  F  R  C  I  S  R  Y  S  S  C  H  N  T  S  S  S  G  K  T  Q  R  S  K  R  Q  *  S  *  L  Y  V  W  L  P  F  M  P  L  T  R  L  W  V  C  *  I  F  V  E  A  K  H  F  S  C  F  *  T  Q  L  K  N  A  M  R  L  W :   Q  L  P  N  F  W  L  *  C  I  V  I  *  I  Y  P  S  A  K  T  L  C  L  M  K  S  R  G  G  K  F  I  I  P  F  R  *  L  Y  F  S :   L  A  L  L  T  *  I  T  G  H  *  N  F  S  S  I  G  H  G  S  L  S  L  S  V  Q  H  A  L  S  *  *  S  R  C  R  F  L  G  C  I  R  I  G  S  A  G  R  L  P  S  F  S  I  F  H  S  Q  W  P  C  T  P  W  L  F  S  T  M  F  S  Q  R  N  C  S  H  T  N  H  F  Q  S  S  S  A  L  K  G  *  F  S  S  A  F  G  R :   G  C  W  L  K  F  *  S  R  G  E  L  S  N  L  T  I  F  G  W  M  W  S  T  F  R  K  P  F  R  M  F  *  F  V  W  R  W  F  S  F  L  L  C  S  N  M  H  T  T  W  L  L  T  V  V  M  S  K  Q  S  *  N  *  K  R  M  T  K  S  M  H  K  T  L  V  *  I  D  T  F  P  L  *  S  C  I  Y  H  Q  S  P  C  V  M  Q  V  F  I  V  V  *  P  V  D  T  A  Q  E  G  L  K  I  T  N  F  R  V  C  *  Q  R  R  K  F  L  S  F  P  L  I  T  S  F  Y  S  F  V  V  R  L  L  V  V  I  S  V  I  F  L  H  E  R  L  V  S  L  P  A  P  A  T  S  L  I  A  T  L  *  V  I  I  F  L  I  I  L  R  I  S  *  L  C  E  C  S  N </second_frame>
            <third_frame>   S  Q  Y  S  A  R  I  C  C  H  Y  L  H  S  *  F  I  I  L  *  V  V  Q  *  F  P  E  T  Y  Y  C  L  I  L  S  L  F  L  C  F  R  C  D  *  *  *  L  F  Y  H  L  L  R  S  M  R  I  L  I  N  F  W  C  P  R  S  Q  K  G  Y  G  Y  F  L  Y  L  F  N  L  L  C  I  G  L  V  W  F  F  V  F  Q  E  N  I  L  F  *  F  L  N  C  K  I  C  I  F  N  *  K  F  N  M  Y  L  E  S  *  F  K  I  K  F  L  L  Y  I  R  F  R  R  S  Q  M  D  M  G  V  F  C  I  Y  *  I  C  D  V  L  V  W  V  V  F  C  F  S  R  K  H  L  I  L  I  P  P  N  V  K  S  V  S  L  T  K  N  S  T  C  P  L  N  L  D  F  K  S  N  W  W  I  D  I  K  L  K  F  S  Q  I  *  Y  S  V  E  E  L  Y  V  G  K  F  C  V  W  F  S  D  L  D  K  I  E  N  W  F  A  R  L  V  E  K  C  R  Q  L  K  N  W  *  T  P  V  *  R  S  L  V  F  D  L  Q  E  E  L  C  V  V  F  L  Q  G  L  V  K  Y  G  L  C  *  Y  G  P  C  T  T  H  Y  G  G  I  R  I  F  C  F  A  F  D  A  F  H  D  T  A  L  V  T  T  P  L  L  L  E  K  P  K  G  A  K  G  N  N  H  D  Y  M  Y  G  S  P  L  C  H  *  L  V  C  G  F  V  R  Y  S  W  K  Q  N  I  F  H  V  S  R  L  S  *  R  M  L  *  G  C   : G  N  C  Q  I  F  G  F  D  V  *  L  F  E  Y  I  H  Q  Q  K  H  C  A  *  *  N  Q  G  E  G  N  S  S  F  L  S  D  D  S  I  S   : A  S  H  C  S  L  R  S  P  D  T  E  T  S  Q  A  L  D  M  A  V  C  H  Y  P  S  S  M  L  Y  L  D  D  H  V  A  D  S  W  V  V  S  E  L  A  Q  L  D  V  Y  H  H  S  Q  Y  F  I  L  S  G  H  V  L  L  G  C  F  L  P  C  F  L  K  G  T  A  A  T  Q  T  T  F  K  V  H  L  H  *  R  D  S  F  L  Q  L  L  A   : G  V  A  G  *  N  S  S  L  V  G  N  Y  Q  I  S  P  F  L  V  G  C  G  A  P  S  G  S  H  S  E  C  F  N  L  C  G  D  G  F  L  F  C  Y  A  A  I  C  I  P  R  G  S  L  Q  W  *  C  R  S  K  V  E  T  E  K  G  *  L  S  R  C  T  R  R  W  C  E  *  T  L  F  L  C  D  L  A  F  T  T  S  R  R  V  *  C  K  F  L  L  L  C  N  L  L  I  R  L  R  K  V  L  R  *  L  I  F  A  C  V  S  K  E  G  N  F  Y  H  F  L  *  *  P  V  F  T  L  L  W  L  D  F  L  *  L  Y  Q  *  F  F  F  M  R  G  W  C  P  C  R  H  L  Q  Q  A  *  L  R  L  C  K  *  S  F  S  *  L  S  *  E  Y  H  D  Y  V  N  A  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="+"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="127324" stop="127590"/>
                    <exon start="127713" stop="127835"/>
                    <exon start="128499" stop="128789"/>
                    <exon start="130430" stop="130636"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>885</number_coding_nucleotides>
                  <number_encoded_amino_acids>295</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NMDFASMDRAQLTMVGSGFSALLSMHFTIQLLSQHLFFWKNPKEQKAIIMIICMAPLYAIDSFVGLLDIRGSKTFFMFLDSVKECYEAVAIAKFLALMYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTAHLDHRTLKLLKHWTWQFVIIRPACSILMITLQILGLYPNWLSWTFTIILNISFSVAMYSLVVFYHVFSKELQPHKPLSKFICIKGIVFFSFWQGLLVKILVSWGIIKSHHFWLDVEHLQEAIQNVLICVEMVFFSVMQQYAYHVAPYSGDVEAKLKLKKDD*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="+"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="126715" stop="127020"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>303</number_coding_nucleotides>
                  <number_encoded_amino_acids>101</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISGAPEVKRDMDIFCIYSICCVLVWFGFLFFKKTFYFDSSIVKSVFLTKSSICTLNLDLKSNSCYISGSVEVKWIWVFFVFIEFAMYWFGLYFVFQENILF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="135236" PGL_stop="131862"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="135236" e_stop="134387"/>
            <exon e_start="132084" e_stop="131862"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.988" acc_prob="0.971" e_score="0.998"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="135236" e_stop="134387" e_length="850"/>
          </exon>
          <intron i_serial="1" don_prob="0.988" acc_prob="0.971">
            <gDNA_intron_boundary i_start="134386" i_stop="132085" i_length="2302"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="132084" e_stop="131862" e_length="223"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="135236" stop="134387"/>
              <exon start="132084" stop="131862"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571428" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTTTTTCCCTAAGCATGGTCATTTGATTTTGTCAGCTGGGATGGATACAAAGGTGAAAATTTGGGATGTTTACAATTCCGGTAAATGTATGAGGACTTACATGGGGCATACAAAGGCAGTGAGGGATATTTGGTTTAGCAATGACGGGACGAAGTTTTTGACAGCTGGATATGATAAGTACATTAAGTATTGGGATACAGAAACAGGACAAGTAATTCAAACGTTCACGACGGGTAAGATACCCTATGTGGTGAGGCTTAATCCTGATGAAGATAAGCAGAATGTACTTTTGGCTGGTATGAGTGATAAGAAGATTGTGCAGTGGGATATAAACAGTGGACAGATTACACAAGAGTACGATCAACATCTGGGGGCAGTTAATACAATTACCTTTGTGGATAATAACAGAAGGTTTGTGACCTCTAGTGATGATAAATCACTACGTGTTTGGGAATATGGTATTCCGGTTGTTATCAAGTATATAAGTGAACCCCATATGCATTCCATGCCATCTATTTCGCCCCATCCAAATGGGAATTGGATTGCAGCACAAAGTTTGGATAACCAGATTCTTATTTACAGTACGCGAGAGAGATTTCAGCTGAATAAAAAGAAAAGATTTGCTGGACACATTGTCGCTGGTTATGCCTGCCAGGTCAATTTCTCACCTGATGGACGGTTTGTCTTCTCAGGAGATGGTGAAGGCAGATGCTGGTTTTGGGATTGGAAATCGTGTAAGGTCTTCAGAACTCTCAAGTGTCATGATGGGGTCTGTATTGGTGCAGAGTGGCATCCTCTGGAACAAAGTAAAGTTGCTACTTGTGGCTGGGATGGTTTGATCAAATACTG : GGACTAGTTTTTGAGCAGCCATTTTTGTCTCCATTTACTTTGAGGACAACTTGTTCAACATGGGTTGGCTAGAGGAATCAAGACTCTTATATGCAGTGGGTGGTCAACTCATTTGGGACACGTTGGCTGGAAAAACCAAGCTATGAATGCATTTTTTAGTCAATGCTAGTCTTTACCTCAGTAAAACAGGTTTTCTCAGATGGTTTTCTTTGGTTGAGGTTGT</gDNA_template>
            <first_frame> G  F  S  L  S  M  V  I  *  F  C  Q  L  G  W  I  Q  R  *  K  F  G  M  F  T  I  P  V  N  V  *  G  L  T  W  G  I  Q  R  Q  *  G  I  F  G  L  A  M  T  G  R  S  F  *  Q  L  D  M  I  S  T  L  S  I  G  I  Q  K  Q  D  K  *  F  K  R  S  R  R  V  R  Y  P  M  W  *  G  L  I  L  M  K  I  S  R  M  Y  F  W  L  V  *  V  I  R  R  L  C  S  G  I  *  T  V  D  R  L  H  K  S  T  I  N  I  W  G  Q  L  I  Q  L  P  L  W  I  I  T  E  G  L  *  P  L  V  M  I  N  H  Y  V  F  G  N  M  V  F  R  L  L  S  S  I  *  V  N  P  I  C  I  P  C  H  L  F  R  P  I  Q  M  G  I  G  L  Q  H  K  V  W  I  T  R  F  L  F  T  V  R  E  R  D  F  S  *  I  K  R  K  D  L  L  D  T  L  S  L  V  M  P  A  R  S  I  S  H  L  M  D  G  L  S  S  Q  E  M  V  K  A  D  A  G  F  G  I  G  N  R  V  R  S  S  E  L  S  S  V  M  M  G  S  V  L  V  Q  S  G  I  L  W  N  K  V  K  L  L  L  V  A  G  M  V  *  S  N  T   : G  T  S  F  *  A  A  I  F  V  S  I  Y  F  E  D  N  L  F  N  M  G  W  L  E  E  S  R  L  L  Y  A  V  G  G  Q  L  I  W  D  T  L  A  G  K  T  K  L  *  M  H  F  L  V  N  A  S  L  Y  L  S  K  T  G  F  L  R  W  F  S  L  V  E  V   </first_frame>
            <second_frame>  V  F  P  *  A  W  S  F  D  F  V  S  W  D  G  Y  K  G  E  N  L  G  C  L  Q  F  R  *  M  Y  E  D  L  H  G  A  Y  K  G  S  E  G  Y  L  V  *  Q  *  R  D  E  V  F  D  S  W  I  *  *  V  H  *  V  L  G  Y  R  N  R  T  S  N  S  N  V  H  D  G  *  D  T  L  C  G  E  A  *  S  *  *  R  *  A  E  C  T  F  G  W  Y  E  *  *  E  D  C  A  V  G  Y  K  Q  W  T  D  Y  T  R  V  R  S  T  S  G  G  S  *  Y  N  Y  L  C  G  *  *  Q  K  V  C  D  L  *  *  *  *  I  T  T  C  L  G  I  W  Y  S  G  C  Y  Q  V  Y  K  *  T  P  Y  A  F  H  A  I  Y  F  A  P  S  K  W  E  L  D  C  S  T  K  F  G  *  P  D  S  Y  L  Q  Y  A  R  E  I  S  A  E  *  K  E  K  I  C  W  T  H  C  R  W  L  C  L  P  G  Q  F  L  T  *  W  T  V  C  L  L  R  R  W  *  R  Q  M  L  V  L  G  L  E  I  V  *  G  L  Q  N  S  Q  V  S  *  W  G  L  Y  W  C  R  V  A  S  S  G  T  K  *  S  C  Y  L  W  L  G  W  F  D  Q  I  L  :  G  L  V  F  E  Q  P  F  L  S  P  F  T  L  R  T  T  C  S  T  W  V  G  *  R  N  Q  D  S  Y  M  Q  W  V  V  N  S  F  G  T  R  W  L  E  K  P  S  Y  E  C  I  F  *  S  M  L  V  F  T  S  V  K  Q  V  F  S  D  G  F  L  W  L  R  L  </second_frame>
            <third_frame>   F  F  P  K  H  G  H  L  I  L  S  A  G  M  D  T  K  V  K  I  W  D  V  Y  N  S  G  K  C  M  R  T  Y  M  G  H  T  K  A  V  R  D  I  W  F  S  N  D  G  T  K  F  L  T  A  G  Y  D  K  Y  I  K  Y  W  D  T  E  T  G  Q  V  I  Q  T  F  T  T  G  K  I  P  Y  V  V  R  L  N  P  D  E  D  K  Q  N  V  L  L  A  G  M  S  D  K  K  I  V  Q  W  D  I  N  S  G  Q  I  T  Q  E  Y  D  Q  H  L  G  A  V  N  T  I  T  F  V  D  N  N  R  R  F  V  T  S  S  D  D  K  S  L  R  V  W  E  Y  G  I  P  V  V  I  K  Y  I  S  E  P  H  M  H  S  M  P  S  I  S  P  H  P  N  G  N  W  I  A  A  Q  S  L  D  N  Q  I  L  I  Y  S  T  R  E  R  F  Q  L  N  K  K  K  R  F  A  G  H  I  V  A  G  Y  A  C  Q  V  N  F  S  P  D  G  R  F  V  F  S  G  D  G  E  G  R  C  W  F  W  D  W  K  S  C  K  V  F  R  T  L  K  C  H  D  G  V  C  I  G  A  E  W  H  P  L  E  Q  S  K  V  A  T  C  G  W  D  G  L  I  K  Y  W :   D  *  F  L  S  S  H  F  C  L  H  L  L  *  G  Q  L  V  Q  H  G  L  A  R  G  I  K  T  L  I  C  S  G  W  S  T  H  L  G  H  V  G  W  K  N  Q  A  M  N  A  F  F  S  Q  C  *  S  L  P  Q  *  N  R  F  S  Q  M  V  F  F  G  *  G  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="135234" stop="134387"/>
                    <exon start="132084" stop="132078"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>852</number_coding_nucleotides>
                  <number_encoded_amino_acids>284</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFPKHGHLILSAGMDTKVKIWDVYNSGKCMRTYMGHTKAVRDIWFSNDGTKFLTAGYDKYIKYWDTETGQVIQTFTTGKIPYVVRLNPDEDKQNVLLAGMSDKKIVQWDINSGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISPHPNGNWIAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVFSGDGEGRCWFWDWKSCKVFRTLKCHDGVCIGAEWHPLEQSKVATCGWDGLIKYWD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="-" PGL_start="136154" PGL_stop="135356"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="136154" e_stop="135356"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="136154" e_stop="135356" e_length="799"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="136154" stop="135356"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585855" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAATTAGGTTTCTAATCAAAATATAAAGCTTTCGCCATTTTTCATAGTTTGTGCGTATCCCATGGATCTTTTACAATCTTCATACGAGGATGAATCGCCGGATTCTTCCCCAATACGCATGCTTCCTTCTAAATCCGCCGCCCCTAAAGTCGACGACACCATGCTAGCCCTAACAGTCGCCGGCGAAGCTGCCAGAGCTCAATCCAAACCCCTTGACCCGACCCAGCACGTTGTTGGATTCAACCCGACGTACGAACAACTATGGGCACCAATTTGTGGTCCAGCTCACCCGTACGCAAAGGACGGGTTAGCTCAAGGACTCAGAAATCACAAGTTAGGGTTCGTAGAGGACGCGTCTATTGAGCCCTTTGTATTCGATGAGCAGTACAATACTTTTCAGAAGTATGGGTACGCTGTTGATCCCTCTGAAAATAGCTACATCGGTGATTTGGAAAAAATGAAGGAATGTGATGCAATTTCTGTGTATAACATACCACAGCATGAACAGAAGAAGAGGAAGTTAGAGAAGAAGAAGGAAAAAATGGAGGAGGAGGGTGATGAGCAGGATGTGGATATGACGGAAGTTGAAAATCCGTCCACCGACACATGGTTGATGAAGAACAGGAAGAGTCCATGGGCTGGAAAGAAAGAAGGGTTGCAAGTGGAATTATCTGAGGAGCAGAAAAAATATGCTGAAGAGTATGCTAAGAAGAAGGGTGAAGAAAGAGGTGGTGATAAAGATAAGGCGGAGCCTATGGTTGAAAAGAGCACATTTCATGGTAAAGAGGAAAAGGATTA</gDNA_template>
            <first_frame> K  I  R  F  L  I  K  I  *  S  F  R  H  F  S  *  F  V  R  I  P  W  I  F  Y  N  L  H  T  R  M  N  R  R  I  L  P  Q  Y  A  C  F  L  L  N  P  P  P  L  K  S  T  T  P  C  *  P  *  Q  S  P  A  K  L  P  E  L  N  P  N  P  L  T  R  P  S  T  L  L  D  S  T  R  R  T  N  N  Y  G  H  Q  F  V  V  Q  L  T  R  T  Q  R  T  G  *  L  K  D  S  E  I  T  S  *  G  S  *  R  T  R  L  L  S  P  L  Y  S  M  S  S  T  I  L  F  R  S  M  G  T  L  L  I  P  L  K  I  A  T  S  V  I  W  K  K  *  R  N  V  M  Q  F  L  C  I  T  Y  H  S  M  N  R  R  R  G  S  *  R  R  R  R  K  K  W  R  R  R  V  M  S  R  M  W  I  *  R  K  L  K  I  R  P  P  T  H  G  *  *  R  T  G  R  V  H  G  L  E  R  K  K  G  C  K  W  N  Y  L  R  S  R  K  N  M  L  K  S  M  L  R  R  R  V  K  K  E  V  V  I  K  I  R  R  S  L  W  L  K  R  A  H  F  M  V  K  R  K  R  I  </first_frame>
            <second_frame>  K  L  G  F  *  S  K  Y  K  A  F  A  I  F  H  S  L  C  V  S  H  G  S  F  T  I  F  I  R  G  *  I  A  G  F  F  P  N  T  H  A  S  F  *  I  R  R  P  *  S  R  R  H  H  A  S  P  N  S  R  R  R  S  C  Q  S  S  I  Q  T  P  *  P  D  P  A  R  C  W  I  Q  P  D  V  R  T  T  M  G  T  N  L  W  S  S  S  P  V  R  K  G  R  V  S  S  R  T  Q  K  S  Q  V  R  V  R  R  G  R  V  Y  *  A  L  C  I  R  *  A  V  Q  Y  F  S  E  V  W  V  R  C  *  S  L  *  K  *  L  H  R  *  F  G  K  N  E  G  M  *  C  N  F  C  V  *  H  T  T  A  *  T  E  E  E  E  V  R  E  E  E  G  K  N  G  G  G  G  *  *  A  G  C  G  Y  D  G  S  *  K  S  V  H  R  H  M  V  D  E  E  Q  E  E  S  M  G  W  K  E  R  R  V  A  S  G  I  I  *  G  A  E  K  I  C  *  R  V  C  *  E  E  G  *  R  K  R  W  *  *  R  *  G  G  A  Y  G  *  K  E  H  I  S  W  *  R  G  K  G  L </second_frame>
            <third_frame>   N  *  V  S  N  Q  N  I  K  L  S  P  F  F  I  V  C  A  Y  P  M  D  L  L  Q  S  S  Y  E  D  E  S  P  D  S  S  P  I  R  M  L  P  S  K  S  A  A  P  K  V  D  D  T  M  L  A  L  T  V  A  G  E  A  A  R  A  Q  S  K  P  L  D  P  T  Q  H  V  V  G  F  N  P  T  Y  E  Q  L  W  A  P  I  C  G  P  A  H  P  Y  A  K  D  G  L  A  Q  G  L  R  N  H  K  L  G  F  V  E  D  A  S  I  E  P  F  V  F  D  E  Q  Y  N  T  F  Q  K  Y  G  Y  A  V  D  P  S  E  N  S  Y  I  G  D  L  E  K  M  K  E  C  D  A  I  S  V  Y  N  I  P  Q  H  E  Q  K  K  R  K  L  E  K  K  K  E  K  M  E  E  E  G  D  E  Q  D  V  D  M  T  E  V  E  N  P  S  T  D  T  W  L  M  K  N  R  K  S  P  W  A  G  K  K  E  G  L  Q  V  E  L  S  E  E  Q  K  K  Y  A  E  E  Y  A  K  K  K  G  E  E  R  G  G  D  K  D  K  A  E  P  M  V  E  K  S  T  F  H  G  K  E  E  K  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0090O01.2" strand="-"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="136146" stop="135358"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>789</number_coding_nucleotides>
                  <number_encoded_amino_acids>263</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VSNQNIKLSPFFIVCAYPMDLLQSSYEDESPDSSPIRMLPSKSAAPKVDDTMLALTVAGEAARAQSKPLDPTQHVVGFNPTYEQLWAPICGPAHPYAKDGLAQGLRNHKLGFVEDASIEPFVFDEQYNTFQKYGYAVDPSENSYIGDLEKMKECDAISVYNIPQHEQKKRKLEKKKEKMEEEGDEQDVDMTEVENPSTDTWLMKNRKSPWAGKKEGLQVELSEEQKKYAEEYAKKKGEERGGDKDKAEPMVEKSTFHGKEEKD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 46 chains have been computed
$ 
$ memory statistics:
$ 55552 bytes spliced alignments in total
$ 24 spliced alignments have been stored
$ 2314 bytes was the average size of a spliced alignment
$ 31472 bytes predicted gene locations in total
$ 20 predicted gene locations have been stored
$ 1573 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 50 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 08:57:06
-->
