<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-28 09:13:48"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E331419" ref_strand="+" ref_description="SGN-E331419 [cTOD-9-P13]">
      <seq>atttactttctctctaaagaagacgatcgaccggttcccggcgatagttaacgatcctcttccctttttttaaggctgcgaattctctctctccggcgaaatcaagcttatgcgagattctttttgactgttgcatagctatgtcggttaacaataataataaccctaacaagaatatcggaggaccatcttcctttggcaattcaccgccggggaatccgatggcacatctccaggcacaatcacaaggccagcaacagatgccttcagggtttcctggggcatttcagctatcgcagctatctgctgcacatgcccaagcaattgctcaagctcagtcgaaagttcaggctcatgcgcaagctcaagcacaagctcaagctgctcatgcccagtttcaggcccagttacaggctcaaggtttatctcttagccaggctcatgctcttggcaattttggttcttcctcaccctcgatgcctggaagtgctttggcaaaacgcttacctcagaaacctcctgtgcggccacctgcattcacaactactaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="20" stop="1323"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="320" g_stop="428" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="109" r_length="109" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="429" i_stop="580" i_length="152">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="581" g_stop="1023" g_length="443"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="552" r_length="443" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E331419" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331419" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="320" e_stop="428"/>
          <exon e_start="581" e_stop="1023"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTACTTTCTCTCTAAAGAAGACGATCGACCGCTTCCCGGCGATTGTTAACGATCCTCTTCCCTTTTTTTAAGGCTGCGAATTCTCTCTCTCCGGCGAAATCAAGCTTGTAAGTTTCTCCCTGCTGTTCTTTTTTCTAGATTTGTTGCTTTCATTTTTTCGGTAGATTATAAAAAAAAGCCCTAATTTTTTTCAGTGATTTGTACTGGTGTTGTTGTGTTTTGAGTGAATTGGAGAAAAACTGTTTGTGTTTTGATGCAGATGCGAGATTCTTTTTGACTGTTGCATAGCTATGTCGGTTAACAATAATAATAACCCTAACAAGAATATCGGAGGACCATCTTCCTTTGGCAATTCACCGCCGGGGAATCCGATGGCACATCTCCAGGCACAATCACAAGGCCAGCAACAGATGCCTTCAGGGTTTCCTGGGGCATTTCAGCTATCGCAGCTATCTGCTGCACATGCCCAAGCAATTGCTCAAGCTCAGTCGAAAGTTCAGGCTCATGCGCAAGCTCAAGCACAAGCTCAAGCTGCTCATGCCCAGTTTCAGGCCCAGTTACAGGCTCAGGGTTTATCTCTTAGCCAGGCTCATGCTCTTGGCAATTTTGGTTCTTCCTCACCCTCGATGCCTGGAAGTGCTTTGGCAAAACGCTTACCTCAGAAACCTCCTGTGCGGCCACCTGCATTCACAACTACTAACA</genome_strand>
        <mrna_strand>ATTTACTTTCTCTCTAAAGAAGACGATCGACCGGTTCCCGGCGATAGTTAACGATCCTCTTCCCTTTTTTTAAGGCTGCGAATTCTCTCTCTCCGGCGAAATCAAGCTT........................................................................................................................................................ATGCGAGATTCTTTTTGACTGTTGCATAGCTATGTCGGTTAACAATAATAATAACCCTAACAAGAATATCGGAGGACCATCTTCCTTTGGCAATTCACCGCCGGGGAATCCGATGGCACATCTCCAGGCACAATCACAAGGCCAGCAACAGATGCCTTCAGGGTTTCCTGGGGCATTTCAGCTATCGCAGCTATCTGCTGCACATGCCCAAGCAATTGCTCAAGCTCAGTCGAAAGTTCAGGCTCATGCGCAAGCTCAAGCACAAGCTCAAGCTGCTCATGCCCAGTTTCAGGCCCAGTTACAGGCTCAAGGTTTATCTCTTAGCCAGGCTCATGCTCTTGGCAATTTTGGTTCTTCCTCACCCTCGATGCCTGGAAGTGCTTTGGCAAAACGCTTACCTCAGAAACCTCCTGTGCGGCCACCTGCATTCACAACTACTAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E361825" ref_strand="+" ref_description="SGN-E361825 [cLPP-12-B11]">
      <seq>tttactttctctctaaagaagacgatcgaccgctttgcggcgattgttaacgctcctcttcccttttttaagggctgcgaactctctctctccggcgaaatcaagcttatgctagattctttttgactgttgcatagctatgtcggttaacaataataataaccctaacaagaatataggaggaccatcctcctttggcaattcaccgccggggaatccgatggcacatctccaggcacaatcacaaggccagcaacagatgccttcagggtttcctggggcatttcagttgtcgcagctatctgctgcacatgcccaagcaattgctcaagctcagntcaaagttcaggctcatgcgcaagctcaagcacaagctcaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="21" stop="1153"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="321" g_stop="428" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="108" r_length="108" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="429" i_stop="580" i_length="152">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="581" g_stop="853" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="381" r_length="273" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E361825" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>381</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E361825" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="321" e_stop="428"/>
          <exon e_start="581" e_stop="853"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTACTTTCTCTCTAAAGAAGACGATCGACCGCTTCCCGGCGATTGTTAACGATCCTCTTCCCTTTTTTTAAGGCTGCGAATTCTCTCTCTCCGGCGAAATCAAGCTTGTAAGTTTCTCCCTGCTGTTCTTTTTTCTAGATTTGTTGCTTTCATTTTTTCGGTAGATTATAAAAAAAAGCCCTAATTTTTTTCAGTGATTTGTACTGGTGTTGTTGTGTTTTGAGTGAATTGGAGAAAAACTGTTTGTGTTTTGATGCAGATGCGAGATTCTTTTTGACTGTTGCATAGCTATGTCGGTTAACAATAATAATAACCCTAACAAGAATATCGGAGGACCATCTTCCTTTGGCAATTCACCGCCGGGGAATCCGATGGCACATCTCCAGGCACAATCACAAGGCCAGCAACAGATGCCTTCAGGGTTTCCTGGGGCATTTCAGCTATCGCAGCTATCTGCTGCACATGCCCAAGCAATTGCTCAAGCTCAGTCGAAAGTTCAGGCTCATGCGCAAGCTCAAGCACAAGCTCAAGC</genome_strand>
        <mrna_strand>TTTACTTTCTCTCTAAAGAAGACGATCGACCGCTTTGCGGCGATTGTTAACGCTCCTCTTCCCTTTTTTAAGGGCTGCGAACTCTCTCTCTCCGGCGAAATCAAGCTT........................................................................................................................................................ATGCTAGATTCTTTTTGACTGTTGCATAGCTATGTCGGTTAACAATAATAATAACCCTAACAAGAATATAGGAGGACCATCCTCCTTTGGCAATTCACCGCCGGGGAATCCGATGGCACATCTCCAGGCACAATCACAAGGCCAGCAACAGATGCCTTCAGGGTTTCCTGGGGCATTTCAGTTGTCGCAGCTATCTGCTGCACATGCCCAAGCAATTGCTCAAGCTCAGNTCAAAGTTCAGGCTCATGCGCAAGCTCAAGCACAAGCTCAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E202361" ref_strand="+" ref_description="SGN-E202361 [cLEC-6-B20]">
      <seq>ttactttctctctaaagaagacgatcgaccgcttcccggcgattgttaacgatcctcttgcctttttttaaggctgcgaattctctctctccggcgaaatcaagcttatgcgagattccttttgactgtagcatagctatgtcggttaacaataataataaccctaacaagaatatcggaggaccatcttcctttggcaattcaccggcggggaatccgatggcacatctccaggcacaatcacaaggccagcaacagatgccttcagggtttcctggggcatttcagctatcgcagctatctgctgcacatgcccaagcaattgctcaagctcagacaaaagttcaggctcatgcgcaagctcaagcacaagctcaagctgctcatgcccagtttcaggcccagttacaggctcatggtttatctcttagccaggctcatgctcttggcaattttggttcttcctcaccctcgatgcctggaagtgctttggcaaaacgcttacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="22" stop="1279"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="322" g_stop="428" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="107" r_length="107" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="429" i_stop="580" i_length="152">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="581" g_stop="979" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="506" r_length="399" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E202361" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>506</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E202361" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="322" e_stop="428"/>
          <exon e_start="581" e_stop="979"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACTTTCTCTCTAAAGAAGACGATCGACCGCTTCCCGGCGATTGTTAACGATCCTCTTCCCTTTTTTTAAGGCTGCGAATTCTCTCTCTCCGGCGAAATCAAGCTTGTAAGTTTCTCCCTGCTGTTCTTTTTTCTAGATTTGTTGCTTTCATTTTTTCGGTAGATTATAAAAAAAAGCCCTAATTTTTTTCAGTGATTTGTACTGGTGTTGTTGTGTTTTGAGTGAATTGGAGAAAAACTGTTTGTGTTTTGATGCAGATGCGAGATTCTTTTTGACTGTTGCATAGCTATGTCGGTTAACAATAATAATAACCCTAACAAGAATATCGGAGGACCATCTTCCTTTGGCAATTCACCGCCGGGGAATCCGATGGCACATCTCCAGGCACAATCACAAGGCCAGCAACAGATGCCTTCAGGGTTTCCTGGGGCATTTCAGCTATCGCAGCTATCTGCTGCACATGCCCAAGCAATTGCTCAAGCTCAGTCGAAAGTTCAGGCTCATGCGCAAGCTCAAGCACAAGCTCAAGCTGCTCATGCCCAGTTTCAGGCCCAGTTACAGGCTCAGGGTTTATCTCTTAGCCAGGCTCATGCTCTTGGCAATTTTGGTTCTTCCTCACCCTCGATGCCTGGAAGTGCTTTGGCAAAACGCTTACC</genome_strand>
        <mrna_strand>TTACTTTCTCTCTAAAGAAGACGATCGACCGCTTCCCGGCGATTGTTAACGATCCTCTTGCCTTTTTTTAAGGCTGCGAATTCTCTCTCTCCGGCGAAATCAAGCTT........................................................................................................................................................ATGCGAGATTCCTTTTGACTGTAGCATAGCTATGTCGGTTAACAATAATAATAACCCTAACAAGAATATCGGAGGACCATCTTCCTTTGGCAATTCACCGGCGGGGAATCCGATGGCACATCTCCAGGCACAATCACAAGGCCAGCAACAGATGCCTTCAGGGTTTCCTGGGGCATTTCAGCTATCGCAGCTATCTGCTGCACATGCCCAAGCAATTGCTCAAGCTCAGACAAAAGTTCAGGCTCATGCGCAAGCTCAAGCACAAGCTCAAGCTGCTCATGCCCAGTTTCAGGCCCAGTTACAGGCTCATGGTTTATCTCTTAGCCAGGCTCATGCTCTTGGCAATTTTGGTTCTTCCTCACCCTCGATGCCTGGAAGTGCTTTGGCAAAACGCTTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E302069" ref_strand="+" ref_description="SGN-E302069 [cLEW-19-E21]">
      <seq>aagacgatcgaccgcttcccggcgattgttaacgatcctcttccctttttttaaagctgcgaattctctctctccggcgaaatcaagcttatgcgagattctttttgactgttgcatagctatgtcggttaacaataataataaccctaacaagaatatcggaggaccatcttcctttggcaattcaccgccggggaatccgatggcacatctccaggcacaatcacaaggccagcaacagatgccttcaaggtttcctggggcatttcagctatcgcagctatctgctgcacatgcccaagcaattgctcaagctcagtcgaaagttcaagctcatgcgcaagctcaagcacaagctcaagctgctcatgcccagtttcaagcccagttacaggctcaaggtttatctcttagccaggctcatgctcttggcaattttggttcttcctcaccctcgatgcctggaagtgctttggcaaaacgcttacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="39" stop="1279"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="339" g_stop="428" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="90" r_length="90" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="429" i_stop="580" i_length="152">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="581" g_stop="979" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="489" r_length="399" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E302069" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E302069" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="339" e_stop="428"/>
          <exon e_start="581" e_stop="979"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGACGATCGACCGCTTCCCGGCGATTGTTAACGATCCTCTTCCCTTTTTTTAAGGCTGCGAATTCTCTCTCTCCGGCGAAATCAAGCTTGTAAGTTTCTCCCTGCTGTTCTTTTTTCTAGATTTGTTGCTTTCATTTTTTCGGTAGATTATAAAAAAAAGCCCTAATTTTTTTCAGTGATTTGTACTGGTGTTGTTGTGTTTTGAGTGAATTGGAGAAAAACTGTTTGTGTTTTGATGCAGATGCGAGATTCTTTTTGACTGTTGCATAGCTATGTCGGTTAACAATAATAATAACCCTAACAAGAATATCGGAGGACCATCTTCCTTTGGCAATTCACCGCCGGGGAATCCGATGGCACATCTCCAGGCACAATCACAAGGCCAGCAACAGATGCCTTCAGGGTTTCCTGGGGCATTTCAGCTATCGCAGCTATCTGCTGCACATGCCCAAGCAATTGCTCAAGCTCAGTCGAAAGTTCAGGCTCATGCGCAAGCTCAAGCACAAGCTCAAGCTGCTCATGCCCAGTTTCAGGCCCAGTTACAGGCTCAGGGTTTATCTCTTAGCCAGGCTCATGCTCTTGGCAATTTTGGTTCTTCCTCACCCTCGATGCCTGGAAGTGCTTTGGCAAAACGCTTACC</genome_strand>
        <mrna_strand>AAGACGATCGACCGCTTCCCGGCGATTGTTAACGATCCTCTTCCCTTTTTTTAAAGCTGCGAATTCTCTCTCTCCGGCGAAATCAAGCTT........................................................................................................................................................ATGCGAGATTCTTTTTGACTGTTGCATAGCTATGTCGGTTAACAATAATAATAACCCTAACAAGAATATCGGAGGACCATCTTCCTTTGGCAATTCACCGCCGGGGAATCCGATGGCACATCTCCAGGCACAATCACAAGGCCAGCAACAGATGCCTTCAAGGTTTCCTGGGGCATTTCAGCTATCGCAGCTATCTGCTGCACATGCCCAAGCAATTGCTCAAGCTCAGTCGAAAGTTCAAGCTCATGCGCAAGCTCAAGCACAAGCTCAAGCTGCTCATGCCCAGTTTCAAGCCCAGTTACAGGCTCAAGGTTTATCTCTTAGCCAGGCTCATGCTCTTGGCAATTTTGGTTCTTCCTCACCCTCGATGCCTGGAAGTGCTTTGGCAAAACGCTTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E317932" ref_strand="+" ref_description="SGN-E317932 [cTOA-30-O21]">
      <seq>tcctcttccctttttttaaggctgcgaattctctctctccggcgaaatcaagcttatgcgagattctttttgactgttgcatagctatgtcggttaacaataataataaccctaacaagaatatcggaggaccatcttcctttggcaattcaccgccggggaatccgatggcacatctccaggcacaatcacaaggccagcaacagatgccttcagggtttcctggggcatttcagctatcgcagctatctgctgcacatgcccaagcaattgctcaagctcagtcgaaagttcaggctcatgcgcaagctcaagcacaagctcaagctgctcatgcccagtttcaggcccagttacaggctcagggtttatctcttagccaggctcatgctcttggcaattttggttcttcctcaccctcgatgcctggaagtgctttggcaaaacgcttacctcagaaacctcctgtgcggccacctgcattcacaactactaacacaatttctccaatgagaacaatggagctttcagcggctgctcgtaggaaaaagcagaagcttcctgagaagcacatgaacgagaaggtggcagccattttgcctgaatcttccctttatactcagctccttgagtttgaatctcgggttgattccgctttaacaagaaagaaagtgacatccaggagtcattgaagaaatcacctactattcagagacgcttcgaatttatgtattcaatagttttgctaaatcaggtcgtaccattcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="74" stop="1595"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="374" g_stop="428" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="429" i_stop="580" i_length="152">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="581" g_stop="1295" g_length="715"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="768" r_length="713" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E317932" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>770</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E317932" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="374" e_stop="428"/>
          <exon e_start="581" e_stop="1295"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTCTTCCCTTTTTTTAAGGCTGCGAATTCTCTCTCTCCGGCGAAATCAAGCTTGTAAGTTTCTCCCTGCTGTTCTTTTTTCTAGATTTGTTGCTTTCATTTTTTCGGTAGATTATAAAAAAAAGCCCTAATTTTTTTCAGTGATTTGTACTGGTGTTGTTGTGTTTTGAGTGAATTGGAGAAAAACTGTTTGTGTTTTGATGCAGATGCGAGATTCTTTTTGACTGTTGCATAGCTATGTCGGTTAACAATAATAATAACCCTAACAAGAATATCGGAGGACCATCTTCCTTTGGCAATTCACCGCCGGGGAATCCGATGGCACATCTCCAGGCACAATCACAAGGCCAGCAACAGATGCCTTCAGGGTTTCCTGGGGCATTTCAGCTATCGCAGCTATCTGCTGCACATGCCCAAGCAATTGCTCAAGCTCAGTCGAAAGTTCAGGCTCATGCGCAAGCTCAAGCACAAGCTCAAGCTGCTCATGCCCAGTTTCAGGCCCAGTTACAGGCTCAGGGTTTATCTCTTAGCCAGGCTCATGCTCTTGGCAATTTTGGTTCTTCCTCACCCTCGATGCCTGGAAGTGCTTTGGCAAAACGCTTACCTCAGAAACCTCCTGTGCGGCCACCTGCATTCACAACTACTAACACAATTTCTCCAATGAGAACAATGGAGCTTTCAGCGGCTGCTCGTAGGAAAAAGCAGAAGCTTCCTGAGAAGCACATGAACGAGAAGGTGGCAGCCATTTTGCCTGAATCTTCCCTTTATACTCAGCTCCTTGAGTTTGAATCTCGGGTTGATTCCGCTTTAACAAGAAAGAAAGTTGACATCCAGGAGTCATTGAAGAATCCACCTACTATTCAGAAGACGCTTCGAATTTATGTATTCAATAGTTTTGCT-AATCAGGTTCGTACCATTCCT</genome_strand>
        <mrna_strand>TCCTCTTCCCTTTTTTTAAGGCTGCGAATTCTCTCTCTCCGGCGAAATCAAGCTT........................................................................................................................................................ATGCGAGATTCTTTTTGACTGTTGCATAGCTATGTCGGTTAACAATAATAATAACCCTAACAAGAATATCGGAGGACCATCTTCCTTTGGCAATTCACCGCCGGGGAATCCGATGGCACATCTCCAGGCACAATCACAAGGCCAGCAACAGATGCCTTCAGGGTTTCCTGGGGCATTTCAGCTATCGCAGCTATCTGCTGCACATGCCCAAGCAATTGCTCAAGCTCAGTCGAAAGTTCAGGCTCATGCGCAAGCTCAAGCACAAGCTCAAGCTGCTCATGCCCAGTTTCAGGCCCAGTTACAGGCTCAGGGTTTATCTCTTAGCCAGGCTCATGCTCTTGGCAATTTTGGTTCTTCCTCACCCTCGATGCCTGGAAGTGCTTTGGCAAAACGCTTACCTCAGAAACCTCCTGTGCGGCCACCTGCATTCACAACTACTAACACAATTTCTCCAATGAGAACAATGGAGCTTTCAGCGGCTGCTCGTAGGAAAAAGCAGAAGCTTCCTGAGAAGCACATGAACGAGAAGGTGGCAGCCATTTTGCCTGAATCTTCCCTTTATACTCAGCTCCTTGAGTTTGAATCTCGGGTTGATTCCGCTTTAACAAGAAAGAAAG-TGACATCCAGGAGTCATTGAAGAAATCACCTACTATTCAG-AGACGCTTCGAATTTATGTATTCAATAGTTTTGCTAAATCAGG-TCGTACCATTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E302960" ref_strand="+" ref_description="SGN-E302960 [cLEW-26-P13]">
      <seq>ttccctttttttaaggctgcgaattctctctctccggcgaaatcaagcttatgcgagattctttttgactgttgcatagctatgtcggttaacaataataataaccctaacaagaatatcggaggaccatcttcctttggcaattcaccgccggggaatccgatggcacatctccaggcacaatcacaaggccagcaacagatgccttcagggtttcctggggcatttcagctatcgcagctatctgctgcacatgcccaagcaattgctcaagctcagtcgaaagttcaggctcatgcgcaagctcaagcacaagctcaagctgctcatgcccagtttcaggcccagttacaggctcagggtttatctcttagccaggctcatgctcttggcaattttggttcttcctcaccctcgatgcctggaagtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="79" stop="1261"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="379" g_stop="428" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="429" i_stop="580" i_length="152">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="581" g_stop="961" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="431" r_length="381" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E302960" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>431</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E302960" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="379" e_stop="428"/>
          <exon e_start="581" e_stop="961"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCCTTTTTTTAAGGCTGCGAATTCTCTCTCTCCGGCGAAATCAAGCTTGTAAGTTTCTCCCTGCTGTTCTTTTTTCTAGATTTGTTGCTTTCATTTTTTCGGTAGATTATAAAAAAAAGCCCTAATTTTTTTCAGTGATTTGTACTGGTGTTGTTGTGTTTTGAGTGAATTGGAGAAAAACTGTTTGTGTTTTGATGCAGATGCGAGATTCTTTTTGACTGTTGCATAGCTATGTCGGTTAACAATAATAATAACCCTAACAAGAATATCGGAGGACCATCTTCCTTTGGCAATTCACCGCCGGGGAATCCGATGGCACATCTCCAGGCACAATCACAAGGCCAGCAACAGATGCCTTCAGGGTTTCCTGGGGCATTTCAGCTATCGCAGCTATCTGCTGCACATGCCCAAGCAATTGCTCAAGCTCAGTCGAAAGTTCAGGCTCATGCGCAAGCTCAAGCACAAGCTCAAGCTGCTCATGCCCAGTTTCAGGCCCAGTTACAGGCTCAGGGTTTATCTCTTAGCCAGGCTCATGCTCTTGGCAATTTTGGTTCTTCCTCACCCTCGATGCCTGGAAGTGC</genome_strand>
        <mrna_strand>TTCCCTTTTTTTAAGGCTGCGAATTCTCTCTCTCCGGCGAAATCAAGCTT........................................................................................................................................................ATGCGAGATTCTTTTTGACTGTTGCATAGCTATGTCGGTTAACAATAATAATAACCCTAACAAGAATATCGGAGGACCATCTTCCTTTGGCAATTCACCGCCGGGGAATCCGATGGCACATCTCCAGGCACAATCACAAGGCCAGCAACAGATGCCTTCAGGGTTTCCTGGGGCATTTCAGCTATCGCAGCTATCTGCTGCACATGCCCAAGCAATTGCTCAAGCTCAGTCGAAAGTTCAGGCTCATGCGCAAGCTCAAGCACAAGCTCAAGCTGCTCATGCCCAGTTTCAGGCCCAGTTACAGGCTCAGGGTTTATCTCTTAGCCAGGCTCATGCTCTTGGCAATTTTGGTTCTTCCTCACCCTCGATGCCTGGAAGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E324510" ref_strand="+" ref_description="SGN-E324510 [cTOC-9-K13]">
      <seq>ttgattccgctttaacaagaaagaaagttgacatccaggagtcattgaagaatccacctactattcagaagacgcttcgaatttatgtattcaatagttttgctaatcaggttcgtaccattcctaagaagccaacagctgaacctcctacatggactcttaagattgtaggaaggattttggaggagggaatggatcctgatcaagctgccatgtttcagaaaactagctccatgtacccaaagttctctactttcttcaaaagagtcaccatttccttggaccagaaactctatcctgataaccatattataatttgggactctgcgcgatctcctgcacctcaagatggttttgaggtcaaaagaaaaggagagcaagagttcactgctaatttaagactagaattgaattacatgcctgagaaatacaaactttcaccagctttaactgaagttctgggtattgaggttgagactcgtgctagaattgtctcttctatctggcattatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="871" stop="1984"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1171" g_stop="1684" g_length="514"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="514" r_length="514" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E324510" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>514</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E324510" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1171" e_stop="1684"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATTCCGCTTTAACAAGAAAGAAAGTTGACATCCAGGAGTCATTGAAGAATCCACCTACTATTCAGAAGACGCTTCGAATTTATGTATTCAATAGTTTTGCTAATCAGGTTCGTACCATTCCTAAGAAGCCAACAGCTGAACCTCCTACATGGACTCTTAAGATTGTAGGAAGGATTTTGGAGGAGGGAATGGATCCTGATCAAGCTGCCATGTTTCAGAAAACTAGCTCCATGTACCCAAAGTTCTCTACTTTCTTCAAAAGAGTCACCATTTCCTTGGACCAGAAACTCTATCCTGATAACCATATTATAATTTGGGACTCTGCGCGATCTCCTGCACCTCAGGATGGTTTTGAGGTCAAAAGAAAAGGAGAGCAAGAGTTCACTGCTAATTTAAGACTAGAATTGAATTACATGCCTGAGAAATACAAACTTTCACCAGCTTTAACTGAAGTTCTGGGTATTGAGGTTGAGACTCGTGCTAGAATTGTCTCTTCTATCTGGCATTATGT</genome_strand>
        <mrna_strand>TTGATTCCGCTTTAACAAGAAAGAAAGTTGACATCCAGGAGTCATTGAAGAATCCACCTACTATTCAGAAGACGCTTCGAATTTATGTATTCAATAGTTTTGCTAATCAGGTTCGTACCATTCCTAAGAAGCCAACAGCTGAACCTCCTACATGGACTCTTAAGATTGTAGGAAGGATTTTGGAGGAGGGAATGGATCCTGATCAAGCTGCCATGTTTCAGAAAACTAGCTCCATGTACCCAAAGTTCTCTACTTTCTTCAAAAGAGTCACCATTTCCTTGGACCAGAAACTCTATCCTGATAACCATATTATAATTTGGGACTCTGCGCGATCTCCTGCACCTCAAGATGGTTTTGAGGTCAAAAGAAAAGGAGAGCAAGAGTTCACTGCTAATTTAAGACTAGAATTGAATTACATGCCTGAGAAATACAAACTTTCACCAGCTTTAACTGAAGTTCTGGGTATTGAGGTTGAGACTCGTGCTAGAATTGTCTCTTCTATCTGGCATTATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E697638" ref_strand="+" ref_description="SGN-E697638 [FA03CF11]">
      <seq>ccgattcagaagacgcttcgaatttatgtattcaatagttttgctaatcaggttcgtaccattcctaagaagccaacagctgaacctcctacatggactcttaagattgtaggaaggattttggaggagggaatggatcctgatcaagctgccatgtttcagaaaactagctccatgtacccaaagttctctactttcttcaaaagagtcaccatttccttggaccagaaactctatcctgataaccatattataatttgggactctgcgcgatctcctgcacctcaggatggttttgaggtcaaaagaaaaggagagcaagagttcactgctaatttaagactagaattgaattacatgcctgagaaatacaaactttcaccagctttaactgaagttctgggtattgaggttgagactcgtgctagaattgtctcttctatctggcattatgttaaggctcgaaagttgcagaaccctgatgatccttcttacttcaactgtgatcctccacttcagaaagtttttggggaaggaaaggttaagttcaatacagtcacaccaaagatcacacctcatttgtctcctccacaacccatacatttggaacacaggattaagctttctggaaatacccctgttggaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="931" stop="2177"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1230" g_stop="1877" g_length="648"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="648" r_length="648" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E697638" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>648</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E697638" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1230" e_stop="1877"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTATTCAGAAGACGCTTCGAATTTATGTATTCAATAGTTTTGCTAATCAGGTTCGTACCATTCCTAAGAAGCCAACAGCTGAACCTCCTACATGGACTCTTAAGATTGTAGGAAGGATTTTGGAGGAGGGAATGGATCCTGATCAAGCTGCCATGTTTCAGAAAACTAGCTCCATGTACCCAAAGTTCTCTACTTTCTTCAAAAGAGTCACCATTTCCTTGGACCAGAAACTCTATCCTGATAACCATATTATAATTTGGGACTCTGCGCGATCTCCTGCACCTCAGGATGGTTTTGAGGTCAAAAGAAAAGGAGAGCAAGAGTTCACTGCTAATTTAAGACTAGAATTGAATTACATGCCTGAGAAATACAAACTTTCACCAGCTTTAACTGAAGTTCTGGGTATTGAGGTTGAGACTCGTGCTAGAATTGTCTCTTCTATCTGGCATTATGTTAAGGCTCGAAAGTTGCAGAACCCTGATGATCCTTCTTACTTCAACTGTGATCCTCCACTTCAGAAAGTTTTTGGGGAAGGAAAGGTTAAGTTCAATACAGTCACACAAAAGATCACACCTCATTTGTCTCCTCCACAACCCATACATTTGGAACACAGGATTAAGCTTTCTGGAAATAACCCTGTTGGAACT</genome_strand>
        <mrna_strand>CCGATTCAGAAGACGCTTCGAATTTATGTATTCAATAGTTTTGCTAATCAGGTTCGTACCATTCCTAAGAAGCCAACAGCTGAACCTCCTACATGGACTCTTAAGATTGTAGGAAGGATTTTGGAGGAGGGAATGGATCCTGATCAAGCTGCCATGTTTCAGAAAACTAGCTCCATGTACCCAAAGTTCTCTACTTTCTTCAAAAGAGTCACCATTTCCTTGGACCAGAAACTCTATCCTGATAACCATATTATAATTTGGGACTCTGCGCGATCTCCTGCACCTCAGGATGGTTTTGAGGTCAAAAGAAAAGGAGAGCAAGAGTTCACTGCTAATTTAAGACTAGAATTGAATTACATGCCTGAGAAATACAAACTTTCACCAGCTTTAACTGAAGTTCTGGGTATTGAGGTTGAGACTCGTGCTAGAATTGTCTCTTCTATCTGGCATTATGTTAAGGCTCGAAAGTTGCAGAACCCTGATGATCCTTCTTACTTCAACTGTGATCCTCCACTTCAGAAAGTTTTTGGGGAAGGAAAGGTTAAGTTCAATACAGTCACACCAAAGATCACACCTCATTTGTCTCCTCCACAACCCATACATTTGGAACACAGGATTAAGCTTTCTGGAAATACCCCTGTTGGAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E718594" ref_strand="+" ref_description="SGN-E718594 [FC05AE06]">
      <seq>ggaagtttccagacgcaccttgattgggggtagggctggaagatataggcgcgaagcttcaatcagattatcgggttttcttagctcaacaaaaatatgaggcattcggtgaatcgtccaccaacacctgatacacgggatgaacaagaaaaggagcctacacttaaggaaattatcaacattaagttgattgaaagtggggaaaaggaaagattaatggagcttttgagggaaaggcttgttgagtctgggtggaaggatgaaatgaaagctctttgtagggagtatataaagaagaaaggacggaacaatataaccattgacgaccttgtacatgtgattaccccaaaaggcagagcttcaattcctgatccgatcaaagctgaattgcttcagagaattcgtacatttcttgtttctcccactctctgattcaacagcttcatgcatgaagagggtagcaatataggtgaagatgtggcattatgtttgactcatttcatcttggaacatcgtttgtctagattatgaccacgatgaggaaaccaggagccatatgagaagatgtgctattggcagtttgcttgtaccaagtttcgtagaactgtataaattgctacttggtggttttatgttgatggcccaggttcagagtttgatcactacatgaccctcaccttttagtggctaaactatctgttatctggttgtccctagttttaagaaagtgtagttttattgagatgcctgctcctcagcagaatccctgctcttcttttgtgtgtactttactcatgtgttcttcgaattaatgaaagccagttggttgtgtgttctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="4315" stop="8673"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4614" g_stop="4711" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4712" i_stop="4812" i_length="101">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4813" g_stop="4900" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="186" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4901" i_stop="4977" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4978" g_stop="5072" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="281" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="5073" i_stop="7518" i_length="2446">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.848" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7519" g_stop="7595" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="358" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="7596" i_stop="7892" i_length="297">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="7893" g_stop="8373" g_length="481"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="839" r_length="481" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E718594" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>839</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E718594" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4614" e_stop="4711"/>
          <exon e_start="4813" e_stop="4900"/>
          <exon e_start="4978" e_stop="5072"/>
          <exon e_start="7519" e_stop="7595"/>
          <exon e_start="7893" e_stop="8373"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGTTTCCAGACGCAGCTTGATTGGGGGTAGGGCTGGAAGATATAGGCGCGAAGCTTCAATCAGATTATCGGGTTTTCTTAGCTCAACAAAAATATGTAATTTCTCCTTCTCCAAACTTACGGTTTTGGTATTATTTATCTGTTAAAAATCATGATTTTTGTTTAATACTTATGGTTTTGTGAATTGTAATGAGTAGGAGGCATTCGGTGAATCGTCCACCAACACCTGATACACGGGATGAACAAGAAAAGGAGCCTACACTTAAGGAAATTATCAACATTAAGGTAAATTTTTAGTCCTTTTTAGATTAGTTGTGTGGGTCTTTTTTTAAAAAAAAATGTTTGATGATTTGCTTTTTTAGTTGATTGAAAGTGGGGAAAAGGAAAGATTAATGGAGCTTTTGAGGGAAAGGCTTGTTGAGTCTGGGTGGAAGGATGAAATGAAAGCTCTTTGTAGGTAATGTATCTCTCTGTGACCTTGTTTCAAACACTTGGAAGGATGAATTGTTGTTTAGTGTTCTCCAAATGAGTTAGCTATGTGTTTTGATCTGTTTTTCAGCAATTGGTGCCTTGGCCTTTGCTACAATGAACCCCAGATAGGAAGTTTATTACTTTTCTTGTTTTGTTGGCATGTGAAAACTTTAATGCTTATTTGACAATCTTGTTATGTTGATTTTTATGGCAAGTGAAAATGCAATTGTGTGTACTACATCCGTGCTTTGCATTCTAGAGGTGCATGTGGTTCAGTTCTCATCAGGACTTTTCATCCCTCTTCCCTCATCCCAGGCTTTCCACGCCCCTTAGACCCCAAATGGTGCTAGGCAAGAAAGGCAAGTTATTTAAGTTTTTCATACTACTTGAACAATAAAACCACCAACAAGTAAGGTGTTCTAAGTTCCTACCGCTGCTTTTACTCTAATAATTGATTGCTTTCGACACACTGATATTAGTGTCTTTTCTGTCTTAAACACACCAACCCTCCTCACAGCATCCCCCTCCTTCCCAAACCAGAAAAAAAAAAGAAGGAAAGAGAACCTTTTTTCTAATAACCATGGTCTGTTCTAGCTTGCATGTAGCTTAGCTATTTCCATGGGATACCTGCTACCTCTCACCAGCACAGGTGTTCTCCATGGCTAGACAGATGGGAAGAAATCACTTAGTGTTTTCATTCTTAAAAGAAAAAGATCACCTTGTGTTTTTGTCTCCGCTGGAAATTGGACCATGAGAAAATTGAACATGAAATCTCATGGTTCTCAACCCAGTCCATGCTCTTGGGTGCACAAGAACCTTTTCCCCTGCTTTTGACCCTAATTCTACTTAAATCAGTGTTGACACCCCAACTAGTTCTAATTCAACTAGTGAAAATTAAAAGGAAGAAACTCTATTATCCTAATTCTAAAATCCAATTATCGAACCTCTCTAATCAGATGGTTACCCTGAATTATTTTAGAAGTAATAAACTTTTGTTTTGTAGTTCCAAAACCCCGACAAAAGATGTCACAAGATGTTTTTTCATTCAACCAGGCATGCATATTAAAAGATAGTTAAATTGGAAATGTTTAATTTTTCAAAAAAAAATTAAATTGGAAAGACAAGTTCAAGAAGTGACAATCCTCCAGCTCTTTTTTTTGGACAAGAGGAGGTTGCTCGGATGGTAAGCACCCTCCACCCCCAACCCTGAGGCTGTGGATTCAAGTCACCTTAGGGAGCAAAACGGATGGGAGCTCCTAGGGAGGAGTTAAAAAGAAGAAGGGGTTTTGAAGGTAAGAGTTCTAGAGGGAAACTAGATGATGAGTAGAAAGAAGAGAGATGGACTCCCTTGAAAAATAAAACTAAAAGAACTTCCTCAGAAAAGGAAGGGATAGAGATGGTAGGGGTATGAGGGGCCTAAGCAAGGAAGGGAAGTGAGGATATGAAGCATGGCAAAAGAGGATGTATGGAGGAGGAGAAGAATGGATAAGGGAGTCTGAAGGGAATGACTAGAAGGTAGTTGAAGGTACAATTGAGGGTTGCAAGTCTGCTGAAAAAAAAGACTCACAGAATTAGTAAGGCAATTTGCCAAAGTAGGATGGGGAGGGTTGGAGGAATAGTTGTGGGATATGGTTGGGAAGGGGCGGAAATAGGAGAAGAAAACATACAAAATAAGGGTAGTGGAAATGCTTGACTTGTTTGATTAGTAGCAGAGATTTTATTCTATTTGAAGAAAGGGAAAAAGTATCACTTCTTCCCCAAATTAACTACTTTAAGCTGGCGTCGATGGTAAAGTTGTGTATTTTGACAATATGCTTTTGTTAAATTATGTGGTATTTTGTGGCCAAAAACCTAATTGTTTAGTGATACTCTATTTTTTCTTTTAAATTTGAAAATTATGTTAGCTATCAATTTTGATTTGGAGATTACAGCCAACTTGGGGGTACTTTGCTGTGGCTAAACTTGAGTTGTATATGAGGGAGAAGGTACATCAGTTCAGTAGTGAAAGGTTATTTAGTTAGATGATGTAAGAGAAAGGGGAGGGGGGTGGGTATTTAATAATACAGGGAAAGCAAAATGTCATAAGAACCAAGAACTCTCGTTCTAGCTATCCTTGTGTTGCAAGTTCTCTTTGTTTTTTTTATTGTCCTGTTTTTTATTTATGGTCCTAATTATTATAAGGTTTGGTGGAGCTATCTTGGAGAAAAAGTTTTGTTTATGTGGCGAGGGTGACAACTATTTGTCTCAATCTTTCAGTTCTTGATATGCACTTGTTTGTGTCTGAGGGTACTTAAAAATAAATTTTTCAAGTTATGACCATATTTGTTCATCTTCTATGATCGTTGTTTTCTGTTTGTTATTCTGTACATATAGCCACCAAATTTTCATTTTGACATGTAACCTTTGTCACATTTGTTCTCTATCAACACTAGGGAGTATATAAAGAAGAAAGGACGGAACAATATAACCATTGACGACCTTGTACATGTGATTACCCCAAAAGGCAGAGGTAAGGGCTTTGTATTTACTTTTGCTTTCTTTCAATACACACATACACACACCTGAAAAAGGAATGGCTATATATATGCTTAAAAGCTATTCCTTCTGCTTAATCTTCTAACTTTTCTTAAGCAACAAAAGAGCATTGATGTTGACATATTCCCTTGAGTAAACGTCATTCCAAATTCTTATTCATTTTCTGATTTTTGGATGTATTAGATGTTGCTCTTGCATTGCCTACATTTGATTATATGTAATTGTTGTTATCCTTGCTAAACTTCTCTGCTTCTTATTTGGAATGTTGCAGCTTCAATTCCTGATCCGATCAAAGCTGAATTGCTTCAGAGAATTCGTACATTTCTTGTTTCTCCCACTCTCTGATTCAACAGCTTCATGCATGAAGAGGGTAGCAATATAGGTGAAGATGTGGCATTATGTTTGACTCATTTCATCTTGGAACATCGTTTGTCTAGATTATGACCACGATGAGGAAACCAGGAGCCATATGAGAAGATGTGCTATTGGCAGTTTGCTTGTACCAAGTTTCGTAGAACTGTATAAATTGCTACTTGGTGGTTTTATGTTGATGGCCCAGGTTCAGAGTTTGATCACTACATGACCCTCACCTTTTAGTGGCTAAACTATCTGTTATCTGGTTGTCCCTAGTTTTAAGAAAGTGTAGTTTTATTGAGATGCCTGCTCCTCAGCAGAATCCCTGCTCTTCTTTTGTGTGTACTTTACTCATGTGTTCTTCGTATTAGTGAAAGCCAGTTGGTTGTGTGTTCTCT</genome_strand>
        <mrna_strand>GGAAGTTTCCAGACGCACCTTGATTGGGGGTAGGGCTGGAAGATATAGGCGCGAAGCTTCAATCAGATTATCGGGTTTTCTTAGCTCAACAAAAATAT.....................................................................................................GAGGCATTCGGTGAATCGTCCACCAACACCTGATACACGGGATGAACAAGAAAAGGAGCCTACACTTAAGGAAATTATCAACATTAAG.............................................................................TTGATTGAAAGTGGGGAAAAGGAAAGATTAATGGAGCTTTTGAGGGAAAGGCTTGTTGAGTCTGGGTGGAAGGATGAAATGAAAGCTCTTTGTAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTATATAAAGAAGAAAGGACGGAACAATATAACCATTGACGACCTTGTACATGTGATTACCCCAAAAGGCAGAG.........................................................................................................................................................................................................................................................................................................CTTCAATTCCTGATCCGATCAAAGCTGAATTGCTTCAGAGAATTCGTACATTTCTTGTTTCTCCCACTCTCTGATTCAACAGCTTCATGCATGAAGAGGGTAGCAATATAGGTGAAGATGTGGCATTATGTTTGACTCATTTCATCTTGGAACATCGTTTGTCTAGATTATGACCACGATGAGGAAACCAGGAGCCATATGAGAAGATGTGCTATTGGCAGTTTGCTTGTACCAAGTTTCGTAGAACTGTATAAATTGCTACTTGGTGGTTTTATGTTGATGGCCCAGGTTCAGAGTTTGATCACTACATGACCCTCACCTTTTAGTGGCTAAACTATCTGTTATCTGGTTGTCCCTAGTTTTAAGAAAGTGTAGTTTTATTGAGATGCCTGCTCCTCAGCAGAATCCCTGCTCTTCTTTTGTGTGTACTTTACTCATGTGTTCTTCGAATTAATGAAAGCCAGTTGGTTGTGTGTTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E315578" ref_strand="+" ref_description="SGN-E315578 [cTOA-22-G24]">
      <seq>agatataggcgcgaagcttcaatcagattatcgggttttcttagctcaacaaaaatatgaggcattcggtgaatcgtccaccaacacctgatacacgggatgaacaagaaaaggagcctacacttaaggaaattatcaacattaagttgattgaaagtggggaaaaggaaagattaatggagcttttgagggaaaggcttgttgagtctgggtggaaggatgaaatgaaagctctttgtagggagtatataaagaagaaaggacggaacaatataaccattgacgaccttgtacatgtgattaccccaaaaggcagagcttcaattcctgatccgatcaaagctgaattgcttcagagaattcgtacatttcttgtttctcccactctctgattcaacagcttcatgcatgaagagggtagcaatataagtgaagatgtggcattatgtttgactcatttcatcttggaacatcgtttgtctagattatgaccacgatgaggagaccaggagccatatgagaagatgtgctattggcagtttgcttgtaccaagtttcgtagaactgtataaattgctacttggaggtattatgttgatggcccatgttcagagtttgatcactacatgaccctcaccttttagtggctaaactatctgttatctggttgtccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="4354" stop="8549"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4654" g_stop="4711" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4712" i_stop="4812" i_length="101">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4813" g_stop="4900" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="146" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4901" i_stop="4977" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4978" g_stop="5072" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="241" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="5073" i_stop="7518" i_length="2446">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.848" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7519" g_stop="7595" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="318" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="7596" i_stop="7892" i_length="297">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="7893" g_stop="8249" g_length="357"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="675" r_length="357" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E315578" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>675</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E315578" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4654" e_stop="4711"/>
          <exon e_start="4813" e_stop="4900"/>
          <exon e_start="4978" e_stop="5072"/>
          <exon e_start="7519" e_stop="7595"/>
          <exon e_start="7893" e_stop="8249"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATATAGGCGCGAAGCTTCAATCAGATTATCGGGTTTTCTTAGCTCAACAAAAATATGTAATTTCTCCTTCTCCAAACTTACGGTTTTGGTATTATTTATCTGTTAAAAATCATGATTTTTGTTTAATACTTATGGTTTTGTGAATTGTAATGAGTAGGAGGCATTCGGTGAATCGTCCACCAACACCTGATACACGGGATGAACAAGAAAAGGAGCCTACACTTAAGGAAATTATCAACATTAAGGTAAATTTTTAGTCCTTTTTAGATTAGTTGTGTGGGTCTTTTTTTAAAAAAAAATGTTTGATGATTTGCTTTTTTAGTTGATTGAAAGTGGGGAAAAGGAAAGATTAATGGAGCTTTTGAGGGAAAGGCTTGTTGAGTCTGGGTGGAAGGATGAAATGAAAGCTCTTTGTAGGTAATGTATCTCTCTGTGACCTTGTTTCAAACACTTGGAAGGATGAATTGTTGTTTAGTGTTCTCCAAATGAGTTAGCTATGTGTTTTGATCTGTTTTTCAGCAATTGGTGCCTTGGCCTTTGCTACAATGAACCCCAGATAGGAAGTTTATTACTTTTCTTGTTTTGTTGGCATGTGAAAACTTTAATGCTTATTTGACAATCTTGTTATGTTGATTTTTATGGCAAGTGAAAATGCAATTGTGTGTACTACATCCGTGCTTTGCATTCTAGAGGTGCATGTGGTTCAGTTCTCATCAGGACTTTTCATCCCTCTTCCCTCATCCCAGGCTTTCCACGCCCCTTAGACCCCAAATGGTGCTAGGCAAGAAAGGCAAGTTATTTAAGTTTTTCATACTACTTGAACAATAAAACCACCAACAAGTAAGGTGTTCTAAGTTCCTACCGCTGCTTTTACTCTAATAATTGATTGCTTTCGACACACTGATATTAGTGTCTTTTCTGTCTTAAACACACCAACCCTCCTCACAGCATCCCCCTCCTTCCCAAACCAGAAAAAAAAAAGAAGGAAAGAGAACCTTTTTTCTAATAACCATGGTCTGTTCTAGCTTGCATGTAGCTTAGCTATTTCCATGGGATACCTGCTACCTCTCACCAGCACAGGTGTTCTCCATGGCTAGACAGATGGGAAGAAATCACTTAGTGTTTTCATTCTTAAAAGAAAAAGATCACCTTGTGTTTTTGTCTCCGCTGGAAATTGGACCATGAGAAAATTGAACATGAAATCTCATGGTTCTCAACCCAGTCCATGCTCTTGGGTGCACAAGAACCTTTTCCCCTGCTTTTGACCCTAATTCTACTTAAATCAGTGTTGACACCCCAACTAGTTCTAATTCAACTAGTGAAAATTAAAAGGAAGAAACTCTATTATCCTAATTCTAAAATCCAATTATCGAACCTCTCTAATCAGATGGTTACCCTGAATTATTTTAGAAGTAATAAACTTTTGTTTTGTAGTTCCAAAACCCCGACAAAAGATGTCACAAGATGTTTTTTCATTCAACCAGGCATGCATATTAAAAGATAGTTAAATTGGAAATGTTTAATTTTTCAAAAAAAAATTAAATTGGAAAGACAAGTTCAAGAAGTGACAATCCTCCAGCTCTTTTTTTTGGACAAGAGGAGGTTGCTCGGATGGTAAGCACCCTCCACCCCCAACCCTGAGGCTGTGGATTCAAGTCACCTTAGGGAGCAAAACGGATGGGAGCTCCTAGGGAGGAGTTAAAAAGAAGAAGGGGTTTTGAAGGTAAGAGTTCTAGAGGGAAACTAGATGATGAGTAGAAAGAAGAGAGATGGACTCCCTTGAAAAATAAAACTAAAAGAACTTCCTCAGAAAAGGAAGGGATAGAGATGGTAGGGGTATGAGGGGCCTAAGCAAGGAAGGGAAGTGAGGATATGAAGCATGGCAAAAGAGGATGTATGGAGGAGGAGAAGAATGGATAAGGGAGTCTGAAGGGAATGACTAGAAGGTAGTTGAAGGTACAATTGAGGGTTGCAAGTCTGCTGAAAAAAAAGACTCACAGAATTAGTAAGGCAATTTGCCAAAGTAGGATGGGGAGGGTTGGAGGAATAGTTGTGGGATATGGTTGGGAAGGGGCGGAAATAGGAGAAGAAAACATACAAAATAAGGGTAGTGGAAATGCTTGACTTGTTTGATTAGTAGCAGAGATTTTATTCTATTTGAAGAAAGGGAAAAAGTATCACTTCTTCCCCAAATTAACTACTTTAAGCTGGCGTCGATGGTAAAGTTGTGTATTTTGACAATATGCTTTTGTTAAATTATGTGGTATTTTGTGGCCAAAAACCTAATTGTTTAGTGATACTCTATTTTTTCTTTTAAATTTGAAAATTATGTTAGCTATCAATTTTGATTTGGAGATTACAGCCAACTTGGGGGTACTTTGCTGTGGCTAAACTTGAGTTGTATATGAGGGAGAAGGTACATCAGTTCAGTAGTGAAAGGTTATTTAGTTAGATGATGTAAGAGAAAGGGGAGGGGGGTGGGTATTTAATAATACAGGGAAAGCAAAATGTCATAAGAACCAAGAACTCTCGTTCTAGCTATCCTTGTGTTGCAAGTTCTCTTTGTTTTTTTTATTGTCCTGTTTTTTATTTATGGTCCTAATTATTATAAGGTTTGGTGGAGCTATCTTGGAGAAAAAGTTTTGTTTATGTGGCGAGGGTGACAACTATTTGTCTCAATCTTTCAGTTCTTGATATGCACTTGTTTGTGTCTGAGGGTACTTAAAAATAAATTTTTCAAGTTATGACCATATTTGTTCATCTTCTATGATCGTTGTTTTCTGTTTGTTATTCTGTACATATAGCCACCAAATTTTCATTTTGACATGTAACCTTTGTCACATTTGTTCTCTATCAACACTAGGGAGTATATAAAGAAGAAAGGACGGAACAATATAACCATTGACGACCTTGTACATGTGATTACCCCAAAAGGCAGAGGTAAGGGCTTTGTATTTACTTTTGCTTTCTTTCAATACACACATACACACACCTGAAAAAGGAATGGCTATATATATGCTTAAAAGCTATTCCTTCTGCTTAATCTTCTAACTTTTCTTAAGCAACAAAAGAGCATTGATGTTGACATATTCCCTTGAGTAAACGTCATTCCAAATTCTTATTCATTTTCTGATTTTTGGATGTATTAGATGTTGCTCTTGCATTGCCTACATTTGATTATATGTAATTGTTGTTATCCTTGCTAAACTTCTCTGCTTCTTATTTGGAATGTTGCAGCTTCAATTCCTGATCCGATCAAAGCTGAATTGCTTCAGAGAATTCGTACATTTCTTGTTTCTCCCACTCTCTGATTCAACAGCTTCATGCATGAAGAGGGTAGCAATATAGGTGAAGATGTGGCATTATGTTTGACTCATTTCATCTTGGAACATCGTTTGTCTAGATTATGACCACGATGAGGAAACCAGGAGCCATATGAGAAGATGTGCTATTGGCAGTTTGCTTGTACCAAGTTTCGTAGAACTGTATAAATTGCTACTTGGTGGTTTTATGTTGATGGCCCAGGTTCAGAGTTTGATCACTACATGACCCTCACCTTTTAGTGGCTAAACTATCTGTTATCTGGTTGTCCCT</genome_strand>
        <mrna_strand>AGATATAGGCGCGAAGCTTCAATCAGATTATCGGGTTTTCTTAGCTCAACAAAAATAT.....................................................................................................GAGGCATTCGGTGAATCGTCCACCAACACCTGATACACGGGATGAACAAGAAAAGGAGCCTACACTTAAGGAAATTATCAACATTAAG.............................................................................TTGATTGAAAGTGGGGAAAAGGAAAGATTAATGGAGCTTTTGAGGGAAAGGCTTGTTGAGTCTGGGTGGAAGGATGAAATGAAAGCTCTTTGTAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTATATAAAGAAGAAAGGACGGAACAATATAACCATTGACGACCTTGTACATGTGATTACCCCAAAAGGCAGAG.........................................................................................................................................................................................................................................................................................................CTTCAATTCCTGATCCGATCAAAGCTGAATTGCTTCAGAGAATTCGTACATTTCTTGTTTCTCCCACTCTCTGATTCAACAGCTTCATGCATGAAGAGGGTAGCAATATAAGTGAAGATGTGGCATTATGTTTGACTCATTTCATCTTGGAACATCGTTTGTCTAGATTATGACCACGATGAGGAGACCAGGAGCCATATGAGAAGATGTGCTATTGGCAGTTTGCTTGTACCAAGTTTCGTAGAACTGTATAAATTGCTACTTGGAGGTATTATGTTGATGGCCCATGTTCAGAGTTTGATCACTACATGACCCTCACCTTTTAGTGGCTAAACTATCTGTTATCTGGTTGTCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E687607" ref_strand="+" ref_description="SGN-E687607 [T3_tus_79_A22]">
      <seq>ttagctcaacaacatatgaggcattcggtgaatcgtccaccaacacctgatacacgggatgaacaagaaaaggagcctacacttaaggaaattatcaacattaagttgattgaaagtggggaaaaggaaagattaatggagcttttgagggaaaggcttgttgagtctgggtggaaggatgaaatgaaagctctttgtagggagtatataaagaagaaaggacggaacaatataaccattgacgaccttgtacatgtgattaccccaaaaggcagagcttcaattcctgatccgatcaaagctgaattgcttcagagaattcgtacatttcttgtttctcccactctctgattcaacagcttcatgcatgaagagggtagcaatataggtgaagatgtggcattatgtttgactcatttcatcttggaacatcgtttgtctagattatgaccacgatgaggaaaccaggagccatatgagaagatgtgctattggcagtttgcttgtaccaagtttcgtagaactgtataaattgctacttggtggttttatgttgatggcccaggttcagagtttgatcactacatgaccctcaccttttagtggctaaactatctgttatctggttgtccctagttttaagaaagtgtagttttattgagatgcctgctcctcagcagaatccctgctcttcttttgtgtgtactttactcatgtgttcttcgtattagtgaaagccagttggttgtgtgttctctctaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacccggggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="4495" stop="8676"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4694" g_stop="4711" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="17" r_length="17" r_score="0.889"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4712" i_stop="4812" i_length="101">
            <donor d_prob="0.983" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4813" g_stop="4900" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="105" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4901" i_stop="4977" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4978" g_stop="5072" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="200" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="5073" i_stop="7518" i_length="2446">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.848" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7519" g_stop="7595" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="277" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="7596" i_stop="7892" i_length="297">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="7893" g_stop="8376" g_length="484"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="761" r_length="484" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="762" polyA_stop="796"/>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E687607" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>762</cumulative_length_of_scored_exons>
        <coverage percentage="0.947" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E687607" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4694" e_stop="4711"/>
          <exon e_start="4813" e_stop="4900"/>
          <exon e_start="4978" e_stop="5072"/>
          <exon e_start="7519" e_stop="7595"/>
          <exon e_start="7893" e_stop="8376"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGCTCAACAAAAATATGTAATTTCTCCTTCTCCAAACTTACGGTTTTGGTATTATTTATCTGTTAAAAATCATGATTTTTGTTTAATACTTATGGTTTTGTGAATTGTAATGAGTAGGAGGCATTCGGTGAATCGTCCACCAACACCTGATACACGGGATGAACAAGAAAAGGAGCCTACACTTAAGGAAATTATCAACATTAAGGTAAATTTTTAGTCCTTTTTAGATTAGTTGTGTGGGTCTTTTTTTAAAAAAAAATGTTTGATGATTTGCTTTTTTAGTTGATTGAAAGTGGGGAAAAGGAAAGATTAATGGAGCTTTTGAGGGAAAGGCTTGTTGAGTCTGGGTGGAAGGATGAAATGAAAGCTCTTTGTAGGTAATGTATCTCTCTGTGACCTTGTTTCAAACACTTGGAAGGATGAATTGTTGTTTAGTGTTCTCCAAATGAGTTAGCTATGTGTTTTGATCTGTTTTTCAGCAATTGGTGCCTTGGCCTTTGCTACAATGAACCCCAGATAGGAAGTTTATTACTTTTCTTGTTTTGTTGGCATGTGAAAACTTTAATGCTTATTTGACAATCTTGTTATGTTGATTTTTATGGCAAGTGAAAATGCAATTGTGTGTACTACATCCGTGCTTTGCATTCTAGAGGTGCATGTGGTTCAGTTCTCATCAGGACTTTTCATCCCTCTTCCCTCATCCCAGGCTTTCCACGCCCCTTAGACCCCAAATGGTGCTAGGCAAGAAAGGCAAGTTATTTAAGTTTTTCATACTACTTGAACAATAAAACCACCAACAAGTAAGGTGTTCTAAGTTCCTACCGCTGCTTTTACTCTAATAATTGATTGCTTTCGACACACTGATATTAGTGTCTTTTCTGTCTTAAACACACCAACCCTCCTCACAGCATCCCCCTCCTTCCCAAACCAGAAAAAAAAAAGAAGGAAAGAGAACCTTTTTTCTAATAACCATGGTCTGTTCTAGCTTGCATGTAGCTTAGCTATTTCCATGGGATACCTGCTACCTCTCACCAGCACAGGTGTTCTCCATGGCTAGACAGATGGGAAGAAATCACTTAGTGTTTTCATTCTTAAAAGAAAAAGATCACCTTGTGTTTTTGTCTCCGCTGGAAATTGGACCATGAGAAAATTGAACATGAAATCTCATGGTTCTCAACCCAGTCCATGCTCTTGGGTGCACAAGAACCTTTTCCCCTGCTTTTGACCCTAATTCTACTTAAATCAGTGTTGACACCCCAACTAGTTCTAATTCAACTAGTGAAAATTAAAAGGAAGAAACTCTATTATCCTAATTCTAAAATCCAATTATCGAACCTCTCTAATCAGATGGTTACCCTGAATTATTTTAGAAGTAATAAACTTTTGTTTTGTAGTTCCAAAACCCCGACAAAAGATGTCACAAGATGTTTTTTCATTCAACCAGGCATGCATATTAAAAGATAGTTAAATTGGAAATGTTTAATTTTTCAAAAAAAAATTAAATTGGAAAGACAAGTTCAAGAAGTGACAATCCTCCAGCTCTTTTTTTTGGACAAGAGGAGGTTGCTCGGATGGTAAGCACCCTCCACCCCCAACCCTGAGGCTGTGGATTCAAGTCACCTTAGGGAGCAAAACGGATGGGAGCTCCTAGGGAGGAGTTAAAAAGAAGAAGGGGTTTTGAAGGTAAGAGTTCTAGAGGGAAACTAGATGATGAGTAGAAAGAAGAGAGATGGACTCCCTTGAAAAATAAAACTAAAAGAACTTCCTCAGAAAAGGAAGGGATAGAGATGGTAGGGGTATGAGGGGCCTAAGCAAGGAAGGGAAGTGAGGATATGAAGCATGGCAAAAGAGGATGTATGGAGGAGGAGAAGAATGGATAAGGGAGTCTGAAGGGAATGACTAGAAGGTAGTTGAAGGTACAATTGAGGGTTGCAAGTCTGCTGAAAAAAAAGACTCACAGAATTAGTAAGGCAATTTGCCAAAGTAGGATGGGGAGGGTTGGAGGAATAGTTGTGGGATATGGTTGGGAAGGGGCGGAAATAGGAGAAGAAAACATACAAAATAAGGGTAGTGGAAATGCTTGACTTGTTTGATTAGTAGCAGAGATTTTATTCTATTTGAAGAAAGGGAAAAAGTATCACTTCTTCCCCAAATTAACTACTTTAAGCTGGCGTCGATGGTAAAGTTGTGTATTTTGACAATATGCTTTTGTTAAATTATGTGGTATTTTGTGGCCAAAAACCTAATTGTTTAGTGATACTCTATTTTTTCTTTTAAATTTGAAAATTATGTTAGCTATCAATTTTGATTTGGAGATTACAGCCAACTTGGGGGTACTTTGCTGTGGCTAAACTTGAGTTGTATATGAGGGAGAAGGTACATCAGTTCAGTAGTGAAAGGTTATTTAGTTAGATGATGTAAGAGAAAGGGGAGGGGGGTGGGTATTTAATAATACAGGGAAAGCAAAATGTCATAAGAACCAAGAACTCTCGTTCTAGCTATCCTTGTGTTGCAAGTTCTCTTTGTTTTTTTTATTGTCCTGTTTTTTATTTATGGTCCTAATTATTATAAGGTTTGGTGGAGCTATCTTGGAGAAAAAGTTTTGTTTATGTGGCGAGGGTGACAACTATTTGTCTCAATCTTTCAGTTCTTGATATGCACTTGTTTGTGTCTGAGGGTACTTAAAAATAAATTTTTCAAGTTATGACCATATTTGTTCATCTTCTATGATCGTTGTTTTCTGTTTGTTATTCTGTACATATAGCCACCAAATTTTCATTTTGACATGTAACCTTTGTCACATTTGTTCTCTATCAACACTAGGGAGTATATAAAGAAGAAAGGACGGAACAATATAACCATTGACGACCTTGTACATGTGATTACCCCAAAAGGCAGAGGTAAGGGCTTTGTATTTACTTTTGCTTTCTTTCAATACACACATACACACACCTGAAAAAGGAATGGCTATATATATGCTTAAAAGCTATTCCTTCTGCTTAATCTTCTAACTTTTCTTAAGCAACAAAAGAGCATTGATGTTGACATATTCCCTTGAGTAAACGTCATTCCAAATTCTTATTCATTTTCTGATTTTTGGATGTATTAGATGTTGCTCTTGCATTGCCTACATTTGATTATATGTAATTGTTGTTATCCTTGCTAAACTTCTCTGCTTCTTATTTGGAATGTTGCAGCTTCAATTCCTGATCCGATCAAAGCTGAATTGCTTCAGAGAATTCGTACATTTCTTGTTTCTCCCACTCTCTGATTCAACAGCTTCATGCATGAAGAGGGTAGCAATATAGGTGAAGATGTGGCATTATGTTTGACTCATTTCATCTTGGAACATCGTTTGTCTAGATTATGACCACGATGAGGAAACCAGGAGCCATATGAGAAGATGTGCTATTGGCAGTTTGCTTGTACCAAGTTTCGTAGAACTGTATAAATTGCTACTTGGTGGTTTTATGTTGATGGCCCAGGTTCAGAGTTTGATCACTACATGACCCTCACCTTTTAGTGGCTAAACTATCTGTTATCTGGTTGTCCCTAGTTTTAAGAAAGTGTAGTTTTATTGAGATGCCTGCTCCTCAGCAGAATCCCTGCTCTTCTTTTGTGTGTACTTTACTCATGTGTTCTTCGTATTAGTGAAAGCCAGTTGGTTGTGTGTTCTCTCTA</genome_strand>
        <mrna_strand>TTAGCTCAAC-AACATAT.....................................................................................................GAGGCATTCGGTGAATCGTCCACCAACACCTGATACACGGGATGAACAAGAAAAGGAGCCTACACTTAAGGAAATTATCAACATTAAG.............................................................................TTGATTGAAAGTGGGGAAAAGGAAAGATTAATGGAGCTTTTGAGGGAAAGGCTTGTTGAGTCTGGGTGGAAGGATGAAATGAAAGCTCTTTGTAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTATATAAAGAAGAAAGGACGGAACAATATAACCATTGACGACCTTGTACATGTGATTACCCCAAAAGGCAGAG.........................................................................................................................................................................................................................................................................................................CTTCAATTCCTGATCCGATCAAAGCTGAATTGCTTCAGAGAATTCGTACATTTCTTGTTTCTCCCACTCTCTGATTCAACAGCTTCATGCATGAAGAGGGTAGCAATATAGGTGAAGATGTGGCATTATGTTTGACTCATTTCATCTTGGAACATCGTTTGTCTAGATTATGACCACGATGAGGAAACCAGGAGCCATATGAGAAGATGTGCTATTGGCAGTTTGCTTGTACCAAGTTTCGTAGAACTGTATAAATTGCTACTTGGTGGTTTTATGTTGATGGCCCAGGTTCAGAGTTTGATCACTACATGACCCTCACCTTTTAGTGGCTAAACTATCTGTTATCTGGTTGTCCCTAGTTTTAAGAAAGTGTAGTTTTATTGAGATGCCTGCTCCTCAGCAGAATCCCTGCTCTTCTTTTGTGTGTACTTTACTCATGTGTTCTTCGTATTAGTGAAAGCCAGTTGGTTGTGTGTTCTCTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E322646" ref_strand="+" ref_description="SGN-E322646 [cTOB-26-C14]">
      <seq>tagctcacaaaaatatgaggcattcggtgaatcgtccaccaacacctgatacacgggatgaacaagaaaaggagcctacacttaaggaaattatcaacattaagttgattgaaagtggggaaaaggaaagattaatggagcttttgagggaaaggcttgttgagtctgggtggaaggatgaaatgaaagctctttgtagggagtatataaagaagaaaggacggaacaatataaccattgacgaccttgtacatgtgattaccccaaaaggcagagcttcaattcctgatccgatcaaagctgaattgcttcagagaattcgtacatttcttgtttctcccactctctgattcaacagcttcatgcatgaagagggtagcaatataggtgaagatgtggcattatgtttgactcatttcatcttggaacatcgtttgtctagattatgaccacgatgaggaaaccaggagccatatgagaagatgtgctattggcagtttgcttgtaccaagtgtcgtagaactgtataaattgctacttggtggttttatgatgatggcccangatcaaagtttgatcactacatgaccctcatcttttagtggctaaactatctgttatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="4508" stop="8538"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4695" g_stop="4711" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="16" r_length="16" r_score="0.941"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4712" i_stop="4812" i_length="101">
            <donor d_prob="0.983" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4813" g_stop="4900" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="104" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4901" i_stop="4977" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4978" g_stop="5072" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="199" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="5073" i_stop="7518" i_length="2446">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.848" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7519" g_stop="7595" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="276" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="7596" i_stop="7892" i_length="297">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="7893" g_stop="8238" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="622" r_length="346" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E322646" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>623</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E322646" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4695" e_stop="4711"/>
          <exon e_start="4813" e_stop="4900"/>
          <exon e_start="4978" e_stop="5072"/>
          <exon e_start="7519" e_stop="7595"/>
          <exon e_start="7893" e_stop="8238"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCTCAACAAAAATATGTAATTTCTCCTTCTCCAAACTTACGGTTTTGGTATTATTTATCTGTTAAAAATCATGATTTTTGTTTAATACTTATGGTTTTGTGAATTGTAATGAGTAGGAGGCATTCGGTGAATCGTCCACCAACACCTGATACACGGGATGAACAAGAAAAGGAGCCTACACTTAAGGAAATTATCAACATTAAGGTAAATTTTTAGTCCTTTTTAGATTAGTTGTGTGGGTCTTTTTTTAAAAAAAAATGTTTGATGATTTGCTTTTTTAGTTGATTGAAAGTGGGGAAAAGGAAAGATTAATGGAGCTTTTGAGGGAAAGGCTTGTTGAGTCTGGGTGGAAGGATGAAATGAAAGCTCTTTGTAGGTAATGTATCTCTCTGTGACCTTGTTTCAAACACTTGGAAGGATGAATTGTTGTTTAGTGTTCTCCAAATGAGTTAGCTATGTGTTTTGATCTGTTTTTCAGCAATTGGTGCCTTGGCCTTTGCTACAATGAACCCCAGATAGGAAGTTTATTACTTTTCTTGTTTTGTTGGCATGTGAAAACTTTAATGCTTATTTGACAATCTTGTTATGTTGATTTTTATGGCAAGTGAAAATGCAATTGTGTGTACTACATCCGTGCTTTGCATTCTAGAGGTGCATGTGGTTCAGTTCTCATCAGGACTTTTCATCCCTCTTCCCTCATCCCAGGCTTTCCACGCCCCTTAGACCCCAAATGGTGCTAGGCAAGAAAGGCAAGTTATTTAAGTTTTTCATACTACTTGAACAATAAAACCACCAACAAGTAAGGTGTTCTAAGTTCCTACCGCTGCTTTTACTCTAATAATTGATTGCTTTCGACACACTGATATTAGTGTCTTTTCTGTCTTAAACACACCAACCCTCCTCACAGCATCCCCCTCCTTCCCAAACCAGAAAAAAAAAAGAAGGAAAGAGAACCTTTTTTCTAATAACCATGGTCTGTTCTAGCTTGCATGTAGCTTAGCTATTTCCATGGGATACCTGCTACCTCTCACCAGCACAGGTGTTCTCCATGGCTAGACAGATGGGAAGAAATCACTTAGTGTTTTCATTCTTAAAAGAAAAAGATCACCTTGTGTTTTTGTCTCCGCTGGAAATTGGACCATGAGAAAATTGAACATGAAATCTCATGGTTCTCAACCCAGTCCATGCTCTTGGGTGCACAAGAACCTTTTCCCCTGCTTTTGACCCTAATTCTACTTAAATCAGTGTTGACACCCCAACTAGTTCTAATTCAACTAGTGAAAATTAAAAGGAAGAAACTCTATTATCCTAATTCTAAAATCCAATTATCGAACCTCTCTAATCAGATGGTTACCCTGAATTATTTTAGAAGTAATAAACTTTTGTTTTGTAGTTCCAAAACCCCGACAAAAGATGTCACAAGATGTTTTTTCATTCAACCAGGCATGCATATTAAAAGATAGTTAAATTGGAAATGTTTAATTTTTCAAAAAAAAATTAAATTGGAAAGACAAGTTCAAGAAGTGACAATCCTCCAGCTCTTTTTTTTGGACAAGAGGAGGTTGCTCGGATGGTAAGCACCCTCCACCCCCAACCCTGAGGCTGTGGATTCAAGTCACCTTAGGGAGCAAAACGGATGGGAGCTCCTAGGGAGGAGTTAAAAAGAAGAAGGGGTTTTGAAGGTAAGAGTTCTAGAGGGAAACTAGATGATGAGTAGAAAGAAGAGAGATGGACTCCCTTGAAAAATAAAACTAAAAGAACTTCCTCAGAAAAGGAAGGGATAGAGATGGTAGGGGTATGAGGGGCCTAAGCAAGGAAGGGAAGTGAGGATATGAAGCATGGCAAAAGAGGATGTATGGAGGAGGAGAAGAATGGATAAGGGAGTCTGAAGGGAATGACTAGAAGGTAGTTGAAGGTACAATTGAGGGTTGCAAGTCTGCTGAAAAAAAAGACTCACAGAATTAGTAAGGCAATTTGCCAAAGTAGGATGGGGAGGGTTGGAGGAATAGTTGTGGGATATGGTTGGGAAGGGGCGGAAATAGGAGAAGAAAACATACAAAATAAGGGTAGTGGAAATGCTTGACTTGTTTGATTAGTAGCAGAGATTTTATTCTATTTGAAGAAAGGGAAAAAGTATCACTTCTTCCCCAAATTAACTACTTTAAGCTGGCGTCGATGGTAAAGTTGTGTATTTTGACAATATGCTTTTGTTAAATTATGTGGTATTTTGTGGCCAAAAACCTAATTGTTTAGTGATACTCTATTTTTTCTTTTAAATTTGAAAATTATGTTAGCTATCAATTTTGATTTGGAGATTACAGCCAACTTGGGGGTACTTTGCTGTGGCTAAACTTGAGTTGTATATGAGGGAGAAGGTACATCAGTTCAGTAGTGAAAGGTTATTTAGTTAGATGATGTAAGAGAAAGGGGAGGGGGGTGGGTATTTAATAATACAGGGAAAGCAAAATGTCATAAGAACCAAGAACTCTCGTTCTAGCTATCCTTGTGTTGCAAGTTCTCTTTGTTTTTTTTATTGTCCTGTTTTTTATTTATGGTCCTAATTATTATAAGGTTTGGTGGAGCTATCTTGGAGAAAAAGTTTTGTTTATGTGGCGAGGGTGACAACTATTTGTCTCAATCTTTCAGTTCTTGATATGCACTTGTTTGTGTCTGAGGGTACTTAAAAATAAATTTTTCAAGTTATGACCATATTTGTTCATCTTCTATGATCGTTGTTTTCTGTTTGTTATTCTGTACATATAGCCACCAAATTTTCATTTTGACATGTAACCTTTGTCACATTTGTTCTCTATCAACACTAGGGAGTATATAAAGAAGAAAGGACGGAACAATATAACCATTGACGACCTTGTACATGTGATTACCCCAAAAGGCAGAGGTAAGGGCTTTGTATTTACTTTTGCTTTCTTTCAATACACACATACACACACCTGAAAAAGGAATGGCTATATATATGCTTAAAAGCTATTCCTTCTGCTTAATCTTCTAACTTTTCTTAAGCAACAAAAGAGCATTGATGTTGACATATTCCCTTGAGTAAACGTCATTCCAAATTCTTATTCATTTTCTGATTTTTGGATGTATTAGATGTTGCTCTTGCATTGCCTACATTTGATTATATGTAATTGTTGTTATCCTTGCTAAACTTCTCTGCTTCTTATTTGGAATGTTGCAGCTTCAATTCCTGATCCGATCAAAGCTGAATTGCTTCAGAGAATTCGTACATTTCTTGTTTCTCCCACTCTCTGATTCAACAGCTTCATGCATGAAGAGGGTAGCAATATAGGTGAAGATGTGGCATTATGTTTGACTCATTTCATCTTGGAACATCGTTTGTCTAGATTATGACCACGATGAGGAAACCAGGAGCCATATGAGAAGATGTGCTATTGGCAGTTTGCTTGTACCAAGTTTCGTAGAACTGTATAAATTGCTACTTGGTGGTTTTATGTTGATGGCCCAGGTTCAGAGTTTGATCACTACATGACCCTCACCTTTTAGTGGCTAAACTATCTGTTATC</genome_strand>
        <mrna_strand>TAGCTC-ACAAAAATAT.....................................................................................................GAGGCATTCGGTGAATCGTCCACCAACACCTGATACACGGGATGAACAAGAAAAGGAGCCTACACTTAAGGAAATTATCAACATTAAG.............................................................................TTGATTGAAAGTGGGGAAAAGGAAAGATTAATGGAGCTTTTGAGGGAAAGGCTTGTTGAGTCTGGGTGGAAGGATGAAATGAAAGCTCTTTGTAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTATATAAAGAAGAAAGGACGGAACAATATAACCATTGACGACCTTGTACATGTGATTACCCCAAAAGGCAGAG.........................................................................................................................................................................................................................................................................................................CTTCAATTCCTGATCCGATCAAAGCTGAATTGCTTCAGAGAATTCGTACATTTCTTGTTTCTCCCACTCTCTGATTCAACAGCTTCATGCATGAAGAGGGTAGCAATATAGGTGAAGATGTGGCATTATGTTTGACTCATTTCATCTTGGAACATCGTTTGTCTAGATTATGACCACGATGAGGAAACCAGGAGCCATATGAGAAGATGTGCTATTGGCAGTTTGCTTGTACCAAGTGTCGTAGAACTGTATAAATTGCTACTTGGTGGTTTTATGATGATGGCCCANGATCAAAGTTTGATCACTACATGACCCTCATCTTTTAGTGGCTAAACTATCTGTTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E700804" ref_strand="+" ref_description="SGN-E700804 [FA14AH03]">
      <seq>ggcattcggtgaatcgtccaccaacacctgatacacgggatgaacaagaaaaggagcctacacttaaggaaattatcaacattaagttgattgaaagtggggaaaaggaaagattaatggagcttttgagggaaaggcttgttgagtctgggtggaaggatgaaatgaaagctctttgtagggagtatataaagaagaaaggacggaacaatataaccattgacgaccttgtacatgtgattaccccaaaaggcagagcttcaattcctgatctgatcaaagctgaattgcttcagagaattcgtacatttcttgtttctcccactctctgattcaacagcttcatgcatgaagagggtagcaatataggtgaagatgtggcattatgtttgactcatttcatcttggaacatcgtttgtctagattatgaccacgatgaggaaaccaggagccatatgagaagatgtgctattggcagtttgcttgtaccaagtttcgtagaactgtataaattgctacttggtggttttatgttgatggcccaggttcagagtttgatcactacatgaccctcaccttttagtggctaaactatctgttatctggttgtccctagttttaagaaagtgtagttttattgagatgcctgctcctcagcagaatccctgctcttcttttgtgtgtactttactcatgtgttcttcgtattagtgaaagccagttggttgtgaaaaaaaaaaaaaaaaannnaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="4515" stop="8665"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4815" g_stop="4900" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4901" i_stop="4977" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4978" g_stop="5072" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="181" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="5073" i_stop="7518" i_length="2446">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.848" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="7519" g_stop="7595" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="258" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="7596" i_stop="7892" i_length="297">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7893" g_stop="8364" g_length="472"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="730" r_length="472" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="732" polyA_stop="749"/>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E700804" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>730</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E700804" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4815" e_stop="4900"/>
          <exon e_start="4978" e_stop="5072"/>
          <exon e_start="7519" e_stop="7595"/>
          <exon e_start="7893" e_stop="8364"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCATTCGGTGAATCGTCCACCAACACCTGATACACGGGATGAACAAGAAAAGGAGCCTACACTTAAGGAAATTATCAACATTAAGGTAAATTTTTAGTCCTTTTTAGATTAGTTGTGTGGGTCTTTTTTTAAAAAAAAATGTTTGATGATTTGCTTTTTTAGTTGATTGAAAGTGGGGAAAAGGAAAGATTAATGGAGCTTTTGAGGGAAAGGCTTGTTGAGTCTGGGTGGAAGGATGAAATGAAAGCTCTTTGTAGGTAATGTATCTCTCTGTGACCTTGTTTCAAACACTTGGAAGGATGAATTGTTGTTTAGTGTTCTCCAAATGAGTTAGCTATGTGTTTTGATCTGTTTTTCAGCAATTGGTGCCTTGGCCTTTGCTACAATGAACCCCAGATAGGAAGTTTATTACTTTTCTTGTTTTGTTGGCATGTGAAAACTTTAATGCTTATTTGACAATCTTGTTATGTTGATTTTTATGGCAAGTGAAAATGCAATTGTGTGTACTACATCCGTGCTTTGCATTCTAGAGGTGCATGTGGTTCAGTTCTCATCAGGACTTTTCATCCCTCTTCCCTCATCCCAGGCTTTCCACGCCCCTTAGACCCCAAATGGTGCTAGGCAAGAAAGGCAAGTTATTTAAGTTTTTCATACTACTTGAACAATAAAACCACCAACAAGTAAGGTGTTCTAAGTTCCTACCGCTGCTTTTACTCTAATAATTGATTGCTTTCGACACACTGATATTAGTGTCTTTTCTGTCTTAAACACACCAACCCTCCTCACAGCATCCCCCTCCTTCCCAAACCAGAAAAAAAAAAGAAGGAAAGAGAACCTTTTTTCTAATAACCATGGTCTGTTCTAGCTTGCATGTAGCTTAGCTATTTCCATGGGATACCTGCTACCTCTCACCAGCACAGGTGTTCTCCATGGCTAGACAGATGGGAAGAAATCACTTAGTGTTTTCATTCTTAAAAGAAAAAGATCACCTTGTGTTTTTGTCTCCGCTGGAAATTGGACCATGAGAAAATTGAACATGAAATCTCATGGTTCTCAACCCAGTCCATGCTCTTGGGTGCACAAGAACCTTTTCCCCTGCTTTTGACCCTAATTCTACTTAAATCAGTGTTGACACCCCAACTAGTTCTAATTCAACTAGTGAAAATTAAAAGGAAGAAACTCTATTATCCTAATTCTAAAATCCAATTATCGAACCTCTCTAATCAGATGGTTACCCTGAATTATTTTAGAAGTAATAAACTTTTGTTTTGTAGTTCCAAAACCCCGACAAAAGATGTCACAAGATGTTTTTTCATTCAACCAGGCATGCATATTAAAAGATAGTTAAATTGGAAATGTTTAATTTTTCAAAAAAAAATTAAATTGGAAAGACAAGTTCAAGAAGTGACAATCCTCCAGCTCTTTTTTTTGGACAAGAGGAGGTTGCTCGGATGGTAAGCACCCTCCACCCCCAACCCTGAGGCTGTGGATTCAAGTCACCTTAGGGAGCAAAACGGATGGGAGCTCCTAGGGAGGAGTTAAAAAGAAGAAGGGGTTTTGAAGGTAAGAGTTCTAGAGGGAAACTAGATGATGAGTAGAAAGAAGAGAGATGGACTCCCTTGAAAAATAAAACTAAAAGAACTTCCTCAGAAAAGGAAGGGATAGAGATGGTAGGGGTATGAGGGGCCTAAGCAAGGAAGGGAAGTGAGGATATGAAGCATGGCAAAAGAGGATGTATGGAGGAGGAGAAGAATGGATAAGGGAGTCTGAAGGGAATGACTAGAAGGTAGTTGAAGGTACAATTGAGGGTTGCAAGTCTGCTGAAAAAAAAGACTCACAGAATTAGTAAGGCAATTTGCCAAAGTAGGATGGGGAGGGTTGGAGGAATAGTTGTGGGATATGGTTGGGAAGGGGCGGAAATAGGAGAAGAAAACATACAAAATAAGGGTAGTGGAAATGCTTGACTTGTTTGATTAGTAGCAGAGATTTTATTCTATTTGAAGAAAGGGAAAAAGTATCACTTCTTCCCCAAATTAACTACTTTAAGCTGGCGTCGATGGTAAAGTTGTGTATTTTGACAATATGCTTTTGTTAAATTATGTGGTATTTTGTGGCCAAAAACCTAATTGTTTAGTGATACTCTATTTTTTCTTTTAAATTTGAAAATTATGTTAGCTATCAATTTTGATTTGGAGATTACAGCCAACTTGGGGGTACTTTGCTGTGGCTAAACTTGAGTTGTATATGAGGGAGAAGGTACATCAGTTCAGTAGTGAAAGGTTATTTAGTTAGATGATGTAAGAGAAAGGGGAGGGGGGTGGGTATTTAATAATACAGGGAAAGCAAAATGTCATAAGAACCAAGAACTCTCGTTCTAGCTATCCTTGTGTTGCAAGTTCTCTTTGTTTTTTTTATTGTCCTGTTTTTTATTTATGGTCCTAATTATTATAAGGTTTGGTGGAGCTATCTTGGAGAAAAAGTTTTGTTTATGTGGCGAGGGTGACAACTATTTGTCTCAATCTTTCAGTTCTTGATATGCACTTGTTTGTGTCTGAGGGTACTTAAAAATAAATTTTTCAAGTTATGACCATATTTGTTCATCTTCTATGATCGTTGTTTTCTGTTTGTTATTCTGTACATATAGCCACCAAATTTTCATTTTGACATGTAACCTTTGTCACATTTGTTCTCTATCAACACTAGGGAGTATATAAAGAAGAAAGGACGGAACAATATAACCATTGACGACCTTGTACATGTGATTACCCCAAAAGGCAGAGGTAAGGGCTTTGTATTTACTTTTGCTTTCTTTCAATACACACATACACACACCTGAAAAAGGAATGGCTATATATATGCTTAAAAGCTATTCCTTCTGCTTAATCTTCTAACTTTTCTTAAGCAACAAAAGAGCATTGATGTTGACATATTCCCTTGAGTAAACGTCATTCCAAATTCTTATTCATTTTCTGATTTTTGGATGTATTAGATGTTGCTCTTGCATTGCCTACATTTGATTATATGTAATTGTTGTTATCCTTGCTAAACTTCTCTGCTTCTTATTTGGAATGTTGCAGCTTCAATTCCTGATCCGATCAAAGCTGAATTGCTTCAGAGAATTCGTACATTTCTTGTTTCTCCCACTCTCTGATTCAACAGCTTCATGCATGAAGAGGGTAGCAATATAGGTGAAGATGTGGCATTATGTTTGACTCATTTCATCTTGGAACATCGTTTGTCTAGATTATGACCACGATGAGGAAACCAGGAGCCATATGAGAAGATGTGCTATTGGCAGTTTGCTTGTACCAAGTTTCGTAGAACTGTATAAATTGCTACTTGGTGGTTTTATGTTGATGGCCCAGGTTCAGAGTTTGATCACTACATGACCCTCACCTTTTAGTGGCTAAACTATCTGTTATCTGGTTGTCCCTAGTTTTAAGAAAGTGTAGTTTTATTGAGATGCCTGCTCCTCAGCAGAATCCCTGCTCTTCTTTTGTGTGTACTTTACTCATGTGTTCTTCGTATTAGTGAAAGCCAGTTGGTTGT</genome_strand>
        <mrna_strand>GGCATTCGGTGAATCGTCCACCAACACCTGATACACGGGATGAACAAGAAAAGGAGCCTACACTTAAGGAAATTATCAACATTAAG.............................................................................TTGATTGAAAGTGGGGAAAAGGAAAGATTAATGGAGCTTTTGAGGGAAAGGCTTGTTGAGTCTGGGTGGAAGGATGAAATGAAAGCTCTTTGTAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTATATAAAGAAGAAAGGACGGAACAATATAACCATTGACGACCTTGTACATGTGATTACCCCAAAAGGCAGAG.........................................................................................................................................................................................................................................................................................................CTTCAATTCCTGATCTGATCAAAGCTGAATTGCTTCAGAGAATTCGTACATTTCTTGTTTCTCCCACTCTCTGATTCAACAGCTTCATGCATGAAGAGGGTAGCAATATAGGTGAAGATGTGGCATTATGTTTGACTCATTTCATCTTGGAACATCGTTTGTCTAGATTATGACCACGATGAGGAAACCAGGAGCCATATGAGAAGATGTGCTATTGGCAGTTTGCTTGTACCAAGTTTCGTAGAACTGTATAAATTGCTACTTGGTGGTTTTATGTTGATGGCCCAGGTTCAGAGTTTGATCACTACATGACCCTCACCTTTTAGTGGCTAAACTATCTGTTATCTGGTTGTCCCTAGTTTTAAGAAAGTGTAGTTTTATTGAGATGCCTGCTCCTCAGCAGAATCCCTGCTCTTCTTTTGTGTGTACTTTACTCATGTGTTCTTCGTATTAGTGAAAGCCAGTTGGTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E745968" ref_strand="+" ref_description="SGN-E745968 [GI|47105434]">
      <seq>gtgacagctgagataataggtgtaagttttttcaaaatacttgaactggtgttcagcgtctcttctctgtgtcttcctggagaagaaaaaggtaggttttggaggtgtaagttaaattgtctgactccgcaacatggatggtatgagcagctattggcaattcggggatgagcttcgaggacaatcaaaagtatcggaggatcatacatggacaacgggtactgtaaaattggctgagcagttaaggtccaagggtgagcgggtgaataaccttgacctttcgaaaagctcagctgaaagtaggttcagggtttatcttggtttacaggaagataacaagtgggaaaaccaatacctcaacatgttgaattttgataccaagataactgacaatacgaccaagagctccttcagtaatgacattcacaacgttaattctgtttgtccgaaatccaatgtcaacagcttgggaaatatgtcatttagcaagttcagtagcaaccacacaaatgacgctagcagctatggcaataacaaaaacactgagagtatcaacgggaacaatgctgttgacaaaaggtttaagactttgcctgctgctgagacactgcccaggaatgaggttcttggtgggtatatctttgtttgcaacaatgacacaatgcaggaagacttgaagcgccagctgtttggtctacctccaaggtacaaagattctgtgagggcaataacaccagggttaccgttgttcctctacaattacactactcaccagttgcatggtatctttgaggcaacaagttttggaggttctaacattgatccaactgcttgggaagataagaagtgtaaaggagagtcgaggttccctgctcaggtgaagatccgtatcaggaaacttggtagggctttggaggaagatgcttttagaccagtgctgcatcactatgatggacccaaatttcgtcttgagctctctgtgcccgagactttggacttgatggatctctttgaaaataccagcgtgttcgcgccagtctgaagtcatggatttattatttattagcatatattatgaactcatgaatattgtagtttagtagtagaaacgtgttctccacagatttccaaagcacaattttggtgtaaagtctggctgagagaggttctgaatagcagggttggctaatttagccaatgaagtgtgattttgtttggagatgcttgaatatgagcctcccaaatttagtgttgtgatcttataatgaattagagaagtaatgattgggtgaaagattgaacgtccaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="15140" stop="9803"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14840" g_stop="14750" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14749" i_stop="13774" i_length="976">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13773" g_stop="13173" g_length="601"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="692" r_length="601" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="13172" i_stop="12607" i_length="566">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12606" g_stop="12506" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="693" r_stop="793" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12505" i_stop="10806" i_length="1700">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10805" g_stop="10722" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="794" r_stop="877" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10721" i_stop="10638" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10637" g_stop="10527" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="878" r_stop="988" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10526" i_stop="10420" i_length="107">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10419" g_stop="10106" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="989" r_stop="1302" r_length="314" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1307" polyA_stop="1322"/>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E745968" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1302</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E745968" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14840" e_stop="14750"/>
          <exon e_start="13773" e_stop="13173"/>
          <exon e_start="12606" e_stop="12506"/>
          <exon e_start="10805" e_stop="10722"/>
          <exon e_start="10637" e_stop="10527"/>
          <exon e_start="10419" e_stop="10106"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGACAGCTGAGATAATAGGTGTAAGTTTTTTCAAAATACTTGAACTGGTGTTCAGCGTCTCTTCTCTGTGTCTTCCTGGAGAAGAAAAAGGTGAATTTCTTCTCTCTTTTCTTGTTCTGCAGTTTTAAGCTTTAGCTATAGATTTCAAAATCTAGGTTTATTGTAACTGAATAATTTTTTTTGTTGATCTCCTAGTTAAATATCTGCTTGAAAACGCGGAGTTAGAATTTGAAATTTATGAGTTCTGAATTTTAGATTAACGACATTACTGGTAATTTTTGTATTTGTTTTGTGGATTGATTTGGCTTAATTCATAGGTAACTTTCTAGCTATGCCTCTGTTTGTTTTTGTGTTAAGTTTAAACTAAGCTGCATTTCCAATTTGGTGATCTTATCTGTGATTCATTTGATCCGTACTGCTTGAACTTTTTACCTAACCATGTATGGCTTGATTAATTTTTTTTTTTTTTCGTTTCCTGTTTTCTTCTGAAAGCTGCTATTGACACAATTACCATAAAGTTTATGTGTTCTCTGTTATGATTCAGTCTTTAATCCCTGCTTGATGCTTGCACGGTGTACGTTGACTTTATTTGCCTTAATTTTGTGATATTCAGCAAGCTTTTTAAACTGTTCCCAACTTCTTTATCACCACTGTTGCCATTTTGATGCTGATGTTGTTGTCACTGTTAGCTGATCTATAATGTAATTCAAGTGGTATTTCAGTCTCCTTCCGTCACTATTTATATGACGTTGTTTGACTGGCACAGAATTTATTAAAAGACTAAAGTTGGAACTTCTGATCTCAAAACAAGTTGTAGAGTGTAGACATTTGTGTGGCTATATCTCATAAAATGCATAGTTTCAAGTTGAATTATTTCTAAATGAGGAAGTATGACATTTTTCTTTGATACAGACTCAAAAGATGTATACTTGTATATCTTATACTATGCTGTGCTTGATTTAACTCCTTTTGCTGTGATTTTTAGAATATAGCCCTGATATTTTGTGATGGACTCACTTTTTAGTATTTTTCGTCTGATTTTTTGTTCTGTTTAAACATATGTCAGGTAGGTTTTGGAGGTGTAAGTTAAATTGTCTGACTCCGCAACATGGATGGTATGAGCAGCTATTGGCAATTCGGGGATGAGCTTCGAGGACAATCAAAAGTATCGGAGGATCATACATGGACAACGGGTACTGTAAAATTGGCTGAGCAGTTAAGGTCCAAGGGTGAGCGGGTGAATAACCTTGACCTTTCGAAAAGCTCAGCTGAAAGTAGGTTCAGGGTTTATCTTGGTTTACAGGAAGATAACAAGTGGGAAAACCAATACCTCAACATGTTGAATTTTGATACCAAGATAACTGACAATACGACCAAGAGCTCCTTCAGTAATGACATTCACAACGTTAATTCTGTTTGTCCGAAATCCAATGTCAACAGCTTGGGAAATATGTCATTTAGCAAGTTCAGTAGCAACCACACAAATGACGCTAGCAGCTATGGCAATAACAAAAACACTGAGAGTATCAACGGGAACAATGCTGTTGACAAAAGGTTTAAGACTTTGCCTGCTGCTGAGACACTGCCCAGGAATGAGGTTCTTGGTGGGTATATCTTTGTTTGCAACAATGACACAATGCAGGAAGACTTGAAGCGCCAGCTGTTTGGTAATTTCTATCATCTTTTAATTATTGTGTGGACTTTTTTGTTTGGCATAATGAGAGTGTGGAATTTATGCCTTGTATACGTTTGGTTATAAACACCTTAAGTGCATGTTGAACGTGCTTGATCAACAGTGTGACTGAAATAATAATGTAACACCACATTCATGTCCTTTACTTGTCGGTCTGTATGCATTTTGCATGCTTTGACATTTTATCACTGATGGCTGATCAGAGTTTGAATCACTCGTGAGAGAAAAACGAAGCAGCTTAGATCCTAACCTTATTATACCTGGAATGTTGTTTTAACAGTCTGTATGCATTTTACATGCGTTGATATTTTTACAATTTGCAGCCGATCAGAGAGTTTTAGTTGTTTGTGAGAGAGAGAAGACGTGAGATCCTAACTCGATAATACCTTCCTAACTTGATATTACCTGGAACCTTATATAGTTATATTTTGTAGATAGAGCAAACTATAGAGAGAGGTGAAGTCATTGATAAATAGGAGGTGATGGCATTATATATATTTGTTGTTATCATAAGTCTCAACTATAATCGTTGTTTCGCAGGTCTACCTCCAAGGTACAAAGATTCTGTGAGGGCAATAACACCAGGGTTACCGTTGTTCCTCTACAATTACACTACTCACCAGTTGCATGGTATCTTTGAGGTATGTCCAACAAATCTGTTTTTACTTGTTCACATCCTTATAATGTAAATTCGGTCAAAGACCATAAGATATTGCACAAACAAAAGCATATTTAGACAAGCATTTGGTTGCTTTGAATATCATAAGATTTTTCTTCATAGAGCAGAGAAACTATTCTTTTGTGTTAAGACTTTGTTATCTAAAAATGGCGAGTAGTTTGAAGACATGCAGTTATATTGGTGATGGACTCACAATTCTACTTCTTTTGCCTTGAGTATTAACTCACTACCGTCATATTTATCAAAATTAGTCCAAGTACTATAAATTGCTGAAGGATGAGCATTACTAGCTTCCATTTTAAGGTGGCTTATTTAAAGGGCTCAGTTTTTCTGCTATAGTTATTCTATGCAACAAAATGAGTTGTTAGAACTCTAGTCATAAAAAGGATAATCTGCAGTTTATTTATCAAATAAGGTAATAGTAATAAATTTAGAGCTAATTATAAACTAAGAAAATAAGAATAAATATTAACTATAAAGCAAGAGTAATGGAATAAATTCAAAGAGAGAAAAAGATCTAGAGCTAAGATTTCCCTATTTATTGCAGTGAACTACGAACATGTCTTCTTCAAATTAGGTCTAGTTAATGACTGTAGATTGTGAGACTAAATTTACCACCAATTTCTTTCATATCTTTAGTGATTAACATCTTAAAATGACCTTCTTAGGCTAATGATCTCAATAAGGACCCCAGTTTCCTCTTGATGGCACCGTTAAGTTAAATCATTCAACCCCTATCCTTCTTAAAGTACAGTTATTCAACATAACCCAAGTCAAATCTTTTTCAAGCATTCTAATCCCACATGCACAACTAGTTGATAGCCTTTTCAACTGATTAGAATCACAAAACAACAGTTGAATAAACAGAATGAACTTGGTTTCATTAAAGAAAGACAACATGAATAATTCAAACAATAAAAGATTCCGTCAAACCCCTAGAAATAAAGCTTAGCTACACATATTCAAGGCAGCAAGCACAAAATCTTTTGAAGAAATTATGAAATGCAAGAAATAAAGAGAGAAAGAAAAACCCTACAGAGAATCTTGCTTTCACCGTTTCTAGCCCTTGTGCACCTCCAAGAACTTCTCTTACATCGTGTTTACCGTGCTTATACAGCGTGTAGAAATAACCCTAGATGAAAAATACCCTTGATGTAATTCGGCGAAGAAAACTGGGCTGAAGATTACCCTGGCATGTCGTGCCAAGAGTGATTTACTCAAACCTGTTTTTTTCCGTCCAAATGTACTATTAAAAGTCTCACCTTGCTTGGTTTCATCACATTGAGTTCTTGTTCAGCAGCCTTGATAGATTTATGTTTCATGGGCATTTAATTACTCCTTTGCTTGCTTACATGACCATTACAACATCAGTTTCGTCCAAGCTAAGAAGATCGCATAGCCTTGTTAATTTCTTTATTCTTTCCTTTAAAAACTTGACACTTCTCGTCCAATTTTCTTCATCTTCGTCATGCTTCCACACAATTTTGTTCCTGCACAGTATTAAGCACAATGCACTAAAACTAATACTCTTAACGGCTTGTGAAGTATTAAGATACGTGCCGAAGTATAGCTAAAAAATGTACTATTCCTGCCAAATATCAATGCATCATCAGAAGCATGATGAATTTCCCCTAGGATATCTTTTAACTATTTTATGTGCAGGCAACAAGTTTTGGAGGTTCTAACATTGATCCAACTGCTTGGGAAGATAAGAAGTGTAAAGGAGAGTCGAGGTTCCCTGCTCAGGTAATCATGAGTTGCCACTTATTTCTCTATAGTTTTTTTCCAGTATTTTATCATACTTATGAGTTTTGTGTGCTTAACATCTAGGTGAAGATCCGTATCAGGAAACTTGGTAGGGCTTTGGAGGAAGATGCTTTTAGACCAGTGCTGCATCACTATGATGGACCCAAATTTCGTCTTGAGCTCTCTGTGCCCGAGGTAAGATGACATCTTATTTCGTAGTTTTGAGTCCTTATGAGAAAGTATGATGTCTAGAGTAGAGTGTTAAACATACCTAACAAGTGACCACCTTGTTGGTTTTGCAGACTTTGGACTTGATGGATCTCTTTGAAAATACCAGCGTGTTCGCGCCAGTCTGAAGTCATGGATTTATTATTTATTAGCATATATTATGAACTCATGAATATTGTAGTTTAGTAGTAGAAACGTGTTCTCCACAGATTTCCAAAGCACAATTTTGGTGTAAAGTCTGGCTGAGAGAGGTTCTGAATAGCAGGGTTGGCTAATTTAGCCAATGAAGTGTGATTTTGTTTGGAGATGCTTGAATATGAGCCTCCCAAATTTAGTGTTGTGATCTTATAATGAATTAGAGAAGTAATGATTGGGTGAAAGATTGAAC</genome_strand>
        <mrna_strand>GTGACAGCTGAGATAATAGGTGTAAGTTTTTTCAAAATACTTGAACTGGTGTTCAGCGTCTCTTCTCTGTGTCTTCCTGGAGAAGAAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGGTTTTGGAGGTGTAAGTTAAATTGTCTGACTCCGCAACATGGATGGTATGAGCAGCTATTGGCAATTCGGGGATGAGCTTCGAGGACAATCAAAAGTATCGGAGGATCATACATGGACAACGGGTACTGTAAAATTGGCTGAGCAGTTAAGGTCCAAGGGTGAGCGGGTGAATAACCTTGACCTTTCGAAAAGCTCAGCTGAAAGTAGGTTCAGGGTTTATCTTGGTTTACAGGAAGATAACAAGTGGGAAAACCAATACCTCAACATGTTGAATTTTGATACCAAGATAACTGACAATACGACCAAGAGCTCCTTCAGTAATGACATTCACAACGTTAATTCTGTTTGTCCGAAATCCAATGTCAACAGCTTGGGAAATATGTCATTTAGCAAGTTCAGTAGCAACCACACAAATGACGCTAGCAGCTATGGCAATAACAAAAACACTGAGAGTATCAACGGGAACAATGCTGTTGACAAAAGGTTTAAGACTTTGCCTGCTGCTGAGACACTGCCCAGGAATGAGGTTCTTGGTGGGTATATCTTTGTTTGCAACAATGACACAATGCAGGAAGACTTGAAGCGCCAGCTGTTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTACCTCCAAGGTACAAAGATTCTGTGAGGGCAATAACACCAGGGTTACCGTTGTTCCTCTACAATTACACTACTCACCAGTTGCATGGTATCTTTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAAGTTTTGGAGGTTCTAACATTGATCCAACTGCTTGGGAAGATAAGAAGTGTAAAGGAGAGTCGAGGTTCCCTGCTCAG....................................................................................GTGAAGATCCGTATCAGGAAACTTGGTAGGGCTTTGGAGGAAGATGCTTTTAGACCAGTGCTGCATCACTATGATGGACCCAAATTTCGTCTTGAGCTCTCTGTGCCCGAG...........................................................................................................ACTTTGGACTTGATGGATCTCTTTGAAAATACCAGCGTGTTCGCGCCAGTCTGAAGTCATGGATTTATTATTTATTAGCATATATTATGAACTCATGAATATTGTAGTTTAGTAGTAGAAACGTGTTCTCCACAGATTTCCAAAGCACAATTTTGGTGTAAAGTCTGGCTGAGAGAGGTTCTGAATAGCAGGGTTGGCTAATTTAGCCAATGAAGTGTGATTTTGTTTGGAGATGCTTGAATATGAGCCTCCCAAATTTAGTGTTGTGATCTTATAATGAATTAGAGAAGTAATGATTGGGTGAAAGATTGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E299816" ref_strand="+" ref_description="SGN-E299816 [cLEW-1-K5]">
      <seq>gtgtaagttttttcaaaatacttgaactggtgttcagcgtctcttctctgtgtcttcctggagaagaaaaaggtaggttttggaggtgtaagttaaattgtctgactccgcaacatggatggtatgagcagctattggcaattcggggatgagcttcgaggacaatcaaaagtatcggaggatcatacatggacaacgggtactgtaaaattggctgagcagttaaggtccaagggtgagcgggtgaataaccttgacctttcgaaaagctcagctgaaagtaggttcagggtttatcttggtttacaggaagataacaagtgggaaaaccaatacctcaacatgttgaattttgataccaagataactgacaatacgaccaagagctccttcagtaatgacattcacaacgttaattctgtttgtccgaaatccaatgtcaacagcttgggaaatatgtcatttagcaagttcagtagcaaccacacaaatgacgctagcagctatggcaataacaaaaacactgagagtatcaacgggaacaatgctgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="15121" stop="12994"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14821" g_stop="14750" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="72" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14749" i_stop="13774" i_length="976">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13773" g_stop="13294" g_length="480"/>
          <reference_exon_boundary r_type="cDNA" r_start="73" r_stop="552" r_length="480" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E299816" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E299816" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14821" e_stop="14750"/>
          <exon e_start="13773" e_stop="13294"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTAAGTTTTTTCAAAATACTTGAACTGGTGTTCAGCGTCTCTTCTCTGTGTCTTCCTGGAGAAGAAAAAGGTGAATTTCTTCTCTCTTTTCTTGTTCTGCAGTTTTAAGCTTTAGCTATAGATTTCAAAATCTAGGTTTATTGTAACTGAATAATTTTTTTTGTTGATCTCCTAGTTAAATATCTGCTTGAAAACGCGGAGTTAGAATTTGAAATTTATGAGTTCTGAATTTTAGATTAACGACATTACTGGTAATTTTTGTATTTGTTTTGTGGATTGATTTGGCTTAATTCATAGGTAACTTTCTAGCTATGCCTCTGTTTGTTTTTGTGTTAAGTTTAAACTAAGCTGCATTTCCAATTTGGTGATCTTATCTGTGATTCATTTGATCCGTACTGCTTGAACTTTTTACCTAACCATGTATGGCTTGATTAATTTTTTTTTTTTTTCGTTTCCTGTTTTCTTCTGAAAGCTGCTATTGACACAATTACCATAAAGTTTATGTGTTCTCTGTTATGATTCAGTCTTTAATCCCTGCTTGATGCTTGCACGGTGTACGTTGACTTTATTTGCCTTAATTTTGTGATATTCAGCAAGCTTTTTAAACTGTTCCCAACTTCTTTATCACCACTGTTGCCATTTTGATGCTGATGTTGTTGTCACTGTTAGCTGATCTATAATGTAATTCAAGTGGTATTTCAGTCTCCTTCCGTCACTATTTATATGACGTTGTTTGACTGGCACAGAATTTATTAAAAGACTAAAGTTGGAACTTCTGATCTCAAAACAAGTTGTAGAGTGTAGACATTTGTGTGGCTATATCTCATAAAATGCATAGTTTCAAGTTGAATTATTTCTAAATGAGGAAGTATGACATTTTTCTTTGATACAGACTCAAAAGATGTATACTTGTATATCTTATACTATGCTGTGCTTGATTTAACTCCTTTTGCTGTGATTTTTAGAATATAGCCCTGATATTTTGTGATGGACTCACTTTTTAGTATTTTTCGTCTGATTTTTTGTTCTGTTTAAACATATGTCAGGTAGGTTTTGGAGGTGTAAGTTAAATTGTCTGACTCCGCAACATGGATGGTATGAGCAGCTATTGGCAATTCGGGGATGAGCTTCGAGGACAATCAAAAGTATCGGAGGATCATACATGGACAACGGGTACTGTAAAATTGGCTGAGCAGTTAAGGTCCAAGGGTGAGCGGGTGAATAACCTTGACCTTTCGAAAAGCTCAGCTGAAAGTAGGTTCAGGGTTTATCTTGGTTTACAGGAAGATAACAAGTGGGAAAACCAATACCTCAACATGTTGAATTTTGATACCAAGATAACTGACAATACGACCAAGAGCTCCTTCAGTAATGACATTCACAACGTTAATTCTGTTTGTCCGAAATCCAATGTCAACAGCTTGGGAAATATGTCATTTAGCAAGTTCAGTAGCAACCACACAAATGACGCTAGCAGCTATGGCAATAACAAAAACACTGAGAGTATCAACGGGAACAATGCTGTT</genome_strand>
        <mrna_strand>GTGTAAGTTTTTTCAAAATACTTGAACTGGTGTTCAGCGTCTCTTCTCTGTGTCTTCCTGGAGAAGAAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGGTTTTGGAGGTGTAAGTTAAATTGTCTGACTCCGCAACATGGATGGTATGAGCAGCTATTGGCAATTCGGGGATGAGCTTCGAGGACAATCAAAAGTATCGGAGGATCATACATGGACAACGGGTACTGTAAAATTGGCTGAGCAGTTAAGGTCCAAGGGTGAGCGGGTGAATAACCTTGACCTTTCGAAAAGCTCAGCTGAAAGTAGGTTCAGGGTTTATCTTGGTTTACAGGAAGATAACAAGTGGGAAAACCAATACCTCAACATGTTGAATTTTGATACCAAGATAACTGACAATACGACCAAGAGCTCCTTCAGTAATGACATTCACAACGTTAATTCTGTTTGTCCGAAATCCAATGTCAACAGCTTGGGAAATATGTCATTTAGCAAGTTCAGTAGCAACCACACAAATGACGCTAGCAGCTATGGCAATAACAAAAACACTGAGAGTATCAACGGGAACAATGCTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E329839" ref_strand="+" ref_description="SGN-E329839 [cTOD-3-J23]">
      <seq>agataataggtgtaagttttttcaaaatacttgaactggtgttcagcgtctcttctctgtgtcttcctggagaagaaaaaggtaggttttggaggtgtaagttaaattgtctgactccgcaacatggatggtatgagcagctattggcaattcggggatgagcttcgaggacaatcaaaagtatcggaggatcatacatggacaacgggtactgtaaaattggctgagcagttaaggtccaagggtgagcgggtgaataaccttgacctttcgaaaagctcagctgaaagtaggttcagggtttatcttggtttacaggaagataacaagtgggaaaaccaatacctcaacatgttgaattttgataccaagataactgacaatacgaccaagagctccttcagtaatgacattcacaacgttaattctgtttgtccgaaatccaatgtcaacagcttgggaaatatgtcatttagcaagttcagtagcaaccacacaaatgacgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="15130" stop="13049"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14830" g_stop="14750" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14749" i_stop="13774" i_length="976">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13773" g_stop="13349" g_length="425"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="506" r_length="425" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E329839" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>506</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E329839" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14830" e_stop="14750"/>
          <exon e_start="13773" e_stop="13349"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATAATAGGTGTAAGTTTTTTCAAAATACTTGAACTGGTGTTCAGCGTCTCTTCTCTGTGTCTTCCTGGAGAAGAAAAAGGTGAATTTCTTCTCTCTTTTCTTGTTCTGCAGTTTTAAGCTTTAGCTATAGATTTCAAAATCTAGGTTTATTGTAACTGAATAATTTTTTTTGTTGATCTCCTAGTTAAATATCTGCTTGAAAACGCGGAGTTAGAATTTGAAATTTATGAGTTCTGAATTTTAGATTAACGACATTACTGGTAATTTTTGTATTTGTTTTGTGGATTGATTTGGCTTAATTCATAGGTAACTTTCTAGCTATGCCTCTGTTTGTTTTTGTGTTAAGTTTAAACTAAGCTGCATTTCCAATTTGGTGATCTTATCTGTGATTCATTTGATCCGTACTGCTTGAACTTTTTACCTAACCATGTATGGCTTGATTAATTTTTTTTTTTTTTCGTTTCCTGTTTTCTTCTGAAAGCTGCTATTGACACAATTACCATAAAGTTTATGTGTTCTCTGTTATGATTCAGTCTTTAATCCCTGCTTGATGCTTGCACGGTGTACGTTGACTTTATTTGCCTTAATTTTGTGATATTCAGCAAGCTTTTTAAACTGTTCCCAACTTCTTTATCACCACTGTTGCCATTTTGATGCTGATGTTGTTGTCACTGTTAGCTGATCTATAATGTAATTCAAGTGGTATTTCAGTCTCCTTCCGTCACTATTTATATGACGTTGTTTGACTGGCACAGAATTTATTAAAAGACTAAAGTTGGAACTTCTGATCTCAAAACAAGTTGTAGAGTGTAGACATTTGTGTGGCTATATCTCATAAAATGCATAGTTTCAAGTTGAATTATTTCTAAATGAGGAAGTATGACATTTTTCTTTGATACAGACTCAAAAGATGTATACTTGTATATCTTATACTATGCTGTGCTTGATTTAACTCCTTTTGCTGTGATTTTTAGAATATAGCCCTGATATTTTGTGATGGACTCACTTTTTAGTATTTTTCGTCTGATTTTTTGTTCTGTTTAAACATATGTCAGGTAGGTTTTGGAGGTGTAAGTTAAATTGTCTGACTCCGCAACATGGATGGTATGAGCAGCTATTGGCAATTCGGGGATGAGCTTCGAGGACAATCAAAAGTATCGGAGGATCATACATGGACAACGGGTACTGTAAAATTGGCTGAGCAGTTAAGGTCCAAGGGTGAGCGGGTGAATAACCTTGACCTTTCGAAAAGCTCAGCTGAAAGTAGGTTCAGGGTTTATCTTGGTTTACAGGAAGATAACAAGTGGGAAAACCAATACCTCAACATGTTGAATTTTGATACCAAGATAACTGACAATACGACCAAGAGCTCCTTCAGTAATGACATTCACAACGTTAATTCTGTTTGTCCGAAATCCAATGTCAACAGCTTGGGAAATATGTCATTTAGCAAGTTCAGTAGCAACCACACAAATGACGC</genome_strand>
        <mrna_strand>AGATAATAGGTGTAAGTTTTTTCAAAATACTTGAACTGGTGTTCAGCGTCTCTTCTCTGTGTCTTCCTGGAGAAGAAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGGTTTTGGAGGTGTAAGTTAAATTGTCTGACTCCGCAACATGGATGGTATGAGCAGCTATTGGCAATTCGGGGATGAGCTTCGAGGACAATCAAAAGTATCGGAGGATCATACATGGACAACGGGTACTGTAAAATTGGCTGAGCAGTTAAGGTCCAAGGGTGAGCGGGTGAATAACCTTGACCTTTCGAAAAGCTCAGCTGAAAGTAGGTTCAGGGTTTATCTTGGTTTACAGGAAGATAACAAGTGGGAAAACCAATACCTCAACATGTTGAATTTTGATACCAAGATAACTGACAATACGACCAAGAGCTCCTTCAGTAATGACATTCACAACGTTAATTCTGTTTGTCCGAAATCCAATGTCAACAGCTTGGGAAATATGTCATTTAGCAAGTTCAGTAGCAACCACACAAATGACGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E725314" ref_strand="+" ref_description="SGN-E725314 [FC26CH12]">
      <seq>gagaccgactgatacaatttaagcaagggcaaaaggatttagctagaaccctaaactgatcgaatcgaagcaactcaacaatggagatgcaaagcgaattcgatcgtctccttttcttcgaacacgctcggaagagtgctgaaaccgcctatgctcagaatcccctagatgctgataacttgacgaggtggggaggtgcattgctggaattatcacagtttcagcccgtagctgaatcgaaacaaatgatttctgatgcaacatcaaagttggaggaggcattgacagtgaaccctgaaaagcatgatgcgctttggtgtttgggaaatgctcatacatcacatgcttttttaactcctgatatggatgaggctaaggtttactttgaaaaagcaactcagtgctttcaacaggcatttgatgcggatccctcaaatgacctttaccgcaaatctctggaagttactgctaaggctccagaattgcacatggaaatccacagacatggtcccatgcaacaacctatggcagcagaaccttcaacatcgacaagcacaaagagttcaaaaaagaagaagagcagtgatctcaagtatgacatttttgggtgggtcatacttgccgttggcattgttgcatgggtgggatttgcaaaatctaatatgcctccaccaccaccaccgcatccacagtgaaacccataatacagcttagctttactggtgaagatactctattagagtttttccttttgcataaacaggaccctaggcattaatgcctgtcatttagctagttactgaaactttataactttctggtgaaaactttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="17653" stop="24276"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17952" g_stop="18127" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="176" r_length="176" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18128" i_stop="18281" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18282" g_stop="18360" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="255" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18361" i_stop="18575" i_length="215">
            <donor d_prob="0.785" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18576" g_stop="18745" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="256" r_stop="425" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18746" i_stop="18829" i_length="84">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18830" g_stop="18877" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="426" r_stop="473" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18878" i_stop="23272" i_length="4395">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="23273" g_stop="23359" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="474" r_stop="560" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="23360" i_stop="23703" i_length="344">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="23704" g_stop="23976" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="561" r_stop="833" r_length="273" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E725314" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>833</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E725314" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17952" e_stop="18127"/>
          <exon e_start="18282" e_stop="18360"/>
          <exon e_start="18576" e_stop="18745"/>
          <exon e_start="18830" e_stop="18877"/>
          <exon e_start="23273" e_stop="23359"/>
          <exon e_start="23704" e_stop="23976"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGACCGACTGATAAAAACTAAGCAAGGGCAAAAGGATTTAGCTAGAACCCTAAACTGATCGAATCGAAGCAACTCAACAATGGAGATGCAAAGCGAATTCGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGATGTCCGTATCTCCTCTTTCTCTTCATTTATCATTTCTGTTTTATCGTTCTAATTTTCGATTTCAGCTGTTTGATGTGTTTTTGTGTTTAATTTGAACTTCGATGCATTGTTGAATGAATGAGTTTGTTGTTTCTGATATATGATGATGAATGCAGAACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTGGTATTGAGTTGCTTGAATTTTTGGTACTTGATTAAATAGTTTGTTATAAATTAGATTTTTCTAGTATCTGTTAGTTAAACCTATAATGTGTTTCTTCAGCCCAAAAAATGTTCTTCTTTTGTTTGCTGTTTTGGTTTGTTTCTGAAATTCTAAGAGACTGATGAAGTGTGTATTTGTTGTCGTTTACTATATGTTTTGGGGACTTAACTTGGCAGATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCGGTATATTTTTATCAATAGACATTCCAAATGTATTTGCTCCTGAACTGTTGGAAGTAGCTTAGATTTTTGTTACTCTGAATGCAGGATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAGGTGAAACTTTTGTTGTTCTTTAGCTAAGTGTCGATATGTTTAATGCTTTGCATCTTTATGTTGTATTTAGGTATTCCAAATGAATGATATCAAACTGATACACGTGGTTGTGTGCCATTGCCTTTTTCTCGCTTATTCCCCTTTTTTGCACTCAATTCTTTTTTTTTTCATGTTCATTCCTACATGGTCCTTTGTAATTGGTGTATATCGATATTGTGTTAATTTTTTGTGTATCTTTTCTTGCCCCTGACTTCCTCCTATCCATATTATGGTATTTTTAGCTTTTACATTTAGTCCAAAATAGATAGTTTTTAACATAAGCAAGAAGTTATTAATAGTTCTTTTCCAAATTTTCACTTAGATAAGTGAATTTTTACCTAACCAAGAAATCATGTTAAAGTAAAATTATTTTATCAAGGTGCAATCACTTATCTCAACGAGTAAGTGATTTCTTAAAAGGGTATGTCCAGGCTTAAAATACCATAGATATGGAATGAAGGGGGTATTGCACGTAGGCCTTACCCCTATCTTCGGAAGTACAAAGGTGGTTTTTGATAAGATCCTTGACTCATGGAAAAGCAATTTAAAGTAGATTGAAAAGAAATTACGAAGTGGACAAGCCATGGAAAAATTCTATAGAGAGCATGAGAAAACACTCTGAAAAGGTGTCGTAACTACAACAAAATACTATTATAATTGAAGTACAAGAAACATGTTGTAGCAGAAATAGGAAGACAAGAAACTACAAGAGTAATACTACAACGAACTAGTATGTAAGGAAAAGCAAGATGACACCCAACTATTTATCAACTTTTTTCCCAAATTCGTGTCCTTCATAACCTCCTATCTAAGGCTGTTTTCTCGATAAGTTTAACCTCATCATGCCCTATCTAATCACCTCTACCTTATGCTTCTTCGGACTATTTGTTCCTATCTGAATTTATCCATAGTCAACCTCTCACACCTCCTCGCTGGGGCATATGTTCCTTTCCTCTACACATTTACAGACCATCTCAGTTTTTTTCTTGCATCTTATCCTTCACCGGGGCTACTTCCACCTCACCCAAATATCTTTACTTCTAATACTATCTCTGTGAGTATGCCCACACATCTATCTCAACATACTCATTCCCGCAACTTCCATTTTATGATTGTGGGGGTTCTTAGCTAGCTAACATTCTGGCAATACAACATAGTTGGTCTAAACACCACTATGTATAACTTGCCTTAAGTTTCAATGGCACTTTCTTAGCACACAACACTTCGGAGGCAAGCCTCCACATCCACCCTGCACCTAAACGATGTGTGATGTTGTCATCAGGAACCTTCTTAGATTACACTTTACATCATTTGTCATTATACAGATGTAAAATTTAGTCAACATTAGAGCCAAATTTTTCGTTGTCAATCAGAGCATTATGAGATCTTACAAATTACTATGCCTCGGTCCAATTTATGTGATACCCTCCATTTTTGAGAGTCAATTTGTCGAAACTTGATGCTAGATTGAATTAGATTAGATGTTTAAAACTCTACAAAATTTACTATAAATTGCAAGTTTAACTGAGATTAATATTTTTAAGCATAACTATATATGAAGAACATAAATTGATTCTGGAGGTTCATTTAATGCATTTAATTTTTTTTCCTCAACTTCTTCTAAAACTGAACTTATCACCACGTTTAACTCGCATAAAGTCTTGCACCATGAAATATCACGCATGAAATTAAAACCTAATAAATACACCAAAAAACTATTATTGTCTATAACTACTGAAATTATATGCTCACAAATTCATATAAATGCCAATATTTTCCAGTTTATGGTTTTAACTGAGTTGTAATTATTTGACATAATTCAATTCATTTTAATTTATAGAATGTTGAATGGCTTTTTTCACTCTGTGTTAGATAACATGCTACTTGTCCAATCCAATAACTTTTGTCAGTTTGTCTGTTCGGGTAAGGTGATTAGAAGTCAAAGTTGTTAGTTTGAATATAGTCCATCTTGATTGACATGATGTATGCCCAAAACTGATTGCTTTAGAACGTCTGTTCAGTTTTGGTAGTTTAAACGTTGAGCTATAGTTAGCCATTTTGTAGGTCTCTATGTGCGGTTTACGTAGGTGAAACAGTCATTTCATATCTTTTGTATTATCTTAGAGACTGATAAATAAGAAAACGTCTTGCGGTAAAGGATGAATGGATTATCACATAAAGTTTATTGCTTTACTGTTAAGCCAAAAGACACTTATTGTTGGATGGTCATTCATCGTTGATATTGAGGGAGATGAAGAAGTGCAATTACTTTAAATATGAAAAATAGGAACTTCTATCAAAATGTGCGTTATTCCTCGTTACATGTGTTCATGCAGTGATACATATTATATATGTGACGCTAGTATGTGTATCAATTTGCTCATCATACTAATTTTGTTCCTGAAGGTTTTCTTGACGTCCTCTTTGGTTTCCATTCCTTACATCAGTAGGAGATGTAATGAATTCACACAAGTAGCAACAGATAAGGAAAATTATATTAGGACTCATTATAAGGAAGGAAATTAAGAAAGAACTGGGATAAAATCTGAAGCAACGATGCACCAATCACTACTCTACCAAGTGACTGCATCCTTCAGAACTTACCTATCTTGCAGGAAAAAGGGAAGTTGCAAATTTTGCAAATTCTTTTTCTACATCAATATTTATTTTAGGATAAATTACAGCCCAAACCTTTGGGCCATCTAGTTAATAAAATATGTACAGTTTATAGGTAGTGTCTACTTCGGTTTAGGTTTGGTAAACTAGATGGCCGAAGTTTACATCTTCTCAAGTATCCCTTTATTCTATCCTATTGCCATTCACATAATTATGGGGTGTGAGATTCTAGGTCCCGTTGGAGTTTATTAGGTAGCTGTCTGGTGTTTGGCTGGCTGGGTATTTCCTTGGTTTCGTTGGTGTAGAAGTGGATCGCACATGGGGGTTGCCCAAGACCCATCAATCCTCCCACACTCAATGTGAGACTCAACAGAACCTCCGCACGCCTGGGATTGGTCTTTTAGAATGTGGACAATGTAACTTGGGGGGGGGGGGGCAACATCGGATAAACAAAGAATTGGGATGAACCTTTCTCAGATACCATGATAAAAAAATTTCAACTGCAATATATTGATCAAGAGGTGAGGATTTTCAAAACCATATAAAGAGACCTAATCAACCCTCACACGATGTGGGACTCGACGGTAACATTTGGCAGTTGCTATATCAGAGATTTACTAAGGTTGCAACGCAAAAGTTTTTCCCTATCCTAGGAATATTTTCATGTTAAATACATTACGTGATTTATTTCCATATTTTCTGCATTCAATTCTAGCTTCTGCACCTTCTAATCAAATTGAACAACTAATGGGATATACTCACTATTTTACTAAAAATGGATCAAAGTGAATTTGTTTTGTTCTTCTGCTAAAAGTTTTCTTTATACGGATAAGATTCAACATTTACTGTATGAGAGATTTGTAAGGTTTCAGACTTAAAAGCTTTTCCTACTCTCCAGGCATCTTAGTATGTTTATTATTGTAAGCTATATGGAAGGGGCATTATGCATTTAAGTGGAAAGTCGTCTCCTTGAGTGATGACACTGAAAACGCTGCTATGATGTAGATGTCAGATCTTTTGACTTTTGTTTGTGGTCTCTGTCGATGAATCCTCCCTCCTTTTCTCTCCCCTACTGGTATATTCCCCAAACCCTTGAAAGGCTTCATTGGAAAACATAAGCTAAAGGCTGGTTGAGGATGTTCCCAATGGCAAGGCAATCCTCTGAAAGTGGGGGATTTGGTTTGCATATAAGACTATGTGAGCATAGAAATTGGTTTATTATAAGGTCAATGGATGTTAGTGTAATATAGTTCAATGTAGCTTCTATTGTCATATTTGTTGACATAGTAATGAGATGTACTATACTTTTTCTTAACTCTCTGATTGCTTAGCTTTTATTAAGCAAATGTGTGCAGGCATGTGATGGTAGTTGCTTGCACGAAAGATGCTTCCTTTTTTGTTGTTTGCATATATCTATCCTAAACCTCAGATTTTTTTTTCTCCAAAGAATGGTGGGAAATCTTTGTATGACACCCCCCTCCCCCCTCCCGACGACTATTTGGTTCCAACATTTCCTTGATTGAGTTGCATTTGTCTTTGGTAATGAATGTGGTTGAGTGTCAAATTATGCTGATATGTCAAAGCAAACAAGCTTGAGAAATGTCCTGACTAGGTGGTGCAGCTTGTGGAATATGATTGTTTAGTTTGTTTTATTTTATCAATTTTGTGATATCTTTACTCATGAAATGTCTCATTTTATGGTTGGGAGTCTCGATTTATGTTGTTCTACATTATATTTAGGCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAGGTATCTCTTTAGTCTTTAGTTCTCACGCTTTATCTCTTGATAGGAGCGATATCTTATCTTCTGTGTTCAGTATAATTCTTACTAATTGATGTGTCTTTATTATTTTTTTTTCTATTTAAATTGTTGTTCAGAAAAGTCGTGATGCCTTCCTCACAAAGTCTAATTGTTGCTCTTTGATTTTGTACGCCTTTAAATGTTACAATTACTTTATCCTCCCTCCTCCCTGGAAAATTGAAAGTTAAAGTCCTCTTAAGACTGGTACTGAATCTCTGTGAAAATCTGATTCATTTTTAATCTATCAATATTGTTGCTGATTCACCATTATGTCTGCTGTTGCATTGCAGAGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGTTGCATGGGTGGGATTTGCAAAATCTAATATGCCTCCACCACCACCACCGCATCCACAGTGAAACCCATAATACAGCTTAGCTTTACTGGTGAAGATACTCTATTAGAGTTTTTCCTTTTGCATAAACAGGACCCTAGGCATTAATGCCTGTCATTTAGCTAGTTACTGAAACTTTATAACTTTCTGGTGAAAACTTTGA</genome_strand>
        <mrna_strand>GAGACCGACTGATACAATTTAAGCAAGGGCAAAAGGATTTAGCTAGAACCCTAAACTGATCGAATCGAAGCAACTCAACAATGGAGATGCAAAGCGAATTCGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGAT..........................................................................................................................................................AACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTG.......................................................................................................................................................................................................................ATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCG....................................................................................GATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAG........................................................................................................................................................................................................................................................................................................................................................AGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGTTGCATGGGTGGGATTTGCAAAATCTAATATGCCTCCACCACCACCACCGCATCCACAGTGAAACCCATAATACAGCTTAGCTTTACTGGTGAAGATACTCTATTAGAGTTTTTCCTTTTGCATAAACAGGACCCTAGGCATTAATGCCTGTCATTTAGCTAGTTACTGAAACTTTATAACTTTCTGGTGAAAACTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E721110" ref_strand="+" ref_description="SGN-E721110 [FC12DC03]">
      <seq>aatcggccgaattgaccgactgataaaaactaagcaagggcaaaaggatttagctagaaccctaaactgatcgaatcgaagcaactcaacaatggagatgcaaagcgaattcgatcgtctccttttcttcgaacacgctcggaagagtgctgaaaccgcctatgctcagaatcccctagatgctgataacttgacgaggtggggaggtgcattgctggaattatcacagtttcagcccgtagctgaatcgaaacaaatgatttctgatgcaacatcaaagttggaggaggcattgacagtgaaccctgaaaagcatgatgcgctttggtgtttgggaaatgctcatacatcacatgcttttttaactcctgatatggatgaggctaaggtttactttgaaaaagcaactcagtgctttcaacaggcatttgatgcggatccctcaaatgacctttaccgcaaatctctggaagttactgctaaggctccagaattgcacatggaaatccacagacatggtcccatgcaacaacctatggcagcagaaccttcaacatcgacaagcacaaagagttcaaaaaagaagaagagcagtgatctcaagtatgacatttttgggtgggtcatacttgccgttggcattgttgcatgggtgggatttgcaaaatctaatatgcctccaccaccaccaccgcatccacagtgaaacccataatacagcttagctttactggtgaagatactctattagagtttttccttttgcataaacaggaccctaggcattaatgcctgtcatttagctagttactgaaactttataactttctggtgaaaactttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="17640" stop="24276"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17955" g_stop="18127" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="187" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18128" i_stop="18281" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18282" g_stop="18360" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="266" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18361" i_stop="18575" i_length="215">
            <donor d_prob="0.785" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18576" g_stop="18745" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="436" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18746" i_stop="18829" i_length="84">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18830" g_stop="18877" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="484" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18878" i_stop="23272" i_length="4395">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="23273" g_stop="23359" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="571" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="23360" i_stop="23703" i_length="344">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="23704" g_stop="23976" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="572" r_stop="844" r_length="273" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E721110" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>830</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E721110" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17955" e_stop="18127"/>
          <exon e_start="18282" e_stop="18360"/>
          <exon e_start="18576" e_stop="18745"/>
          <exon e_start="18830" e_stop="18877"/>
          <exon e_start="23273" e_stop="23359"/>
          <exon e_start="23704" e_stop="23976"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCGACTGATAAAAACTAAGCAAGGGCAAAAGGATTTAGCTAGAACCCTAAACTGATCGAATCGAAGCAACTCAACAATGGAGATGCAAAGCGAATTCGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGATGTCCGTATCTCCTCTTTCTCTTCATTTATCATTTCTGTTTTATCGTTCTAATTTTCGATTTCAGCTGTTTGATGTGTTTTTGTGTTTAATTTGAACTTCGATGCATTGTTGAATGAATGAGTTTGTTGTTTCTGATATATGATGATGAATGCAGAACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTGGTATTGAGTTGCTTGAATTTTTGGTACTTGATTAAATAGTTTGTTATAAATTAGATTTTTCTAGTATCTGTTAGTTAAACCTATAATGTGTTTCTTCAGCCCAAAAAATGTTCTTCTTTTGTTTGCTGTTTTGGTTTGTTTCTGAAATTCTAAGAGACTGATGAAGTGTGTATTTGTTGTCGTTTACTATATGTTTTGGGGACTTAACTTGGCAGATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCGGTATATTTTTATCAATAGACATTCCAAATGTATTTGCTCCTGAACTGTTGGAAGTAGCTTAGATTTTTGTTACTCTGAATGCAGGATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAGGTGAAACTTTTGTTGTTCTTTAGCTAAGTGTCGATATGTTTAATGCTTTGCATCTTTATGTTGTATTTAGGTATTCCAAATGAATGATATCAAACTGATACACGTGGTTGTGTGCCATTGCCTTTTTCTCGCTTATTCCCCTTTTTTGCACTCAATTCTTTTTTTTTTCATGTTCATTCCTACATGGTCCTTTGTAATTGGTGTATATCGATATTGTGTTAATTTTTTGTGTATCTTTTCTTGCCCCTGACTTCCTCCTATCCATATTATGGTATTTTTAGCTTTTACATTTAGTCCAAAATAGATAGTTTTTAACATAAGCAAGAAGTTATTAATAGTTCTTTTCCAAATTTTCACTTAGATAAGTGAATTTTTACCTAACCAAGAAATCATGTTAAAGTAAAATTATTTTATCAAGGTGCAATCACTTATCTCAACGAGTAAGTGATTTCTTAAAAGGGTATGTCCAGGCTTAAAATACCATAGATATGGAATGAAGGGGGTATTGCACGTAGGCCTTACCCCTATCTTCGGAAGTACAAAGGTGGTTTTTGATAAGATCCTTGACTCATGGAAAAGCAATTTAAAGTAGATTGAAAAGAAATTACGAAGTGGACAAGCCATGGAAAAATTCTATAGAGAGCATGAGAAAACACTCTGAAAAGGTGTCGTAACTACAACAAAATACTATTATAATTGAAGTACAAGAAACATGTTGTAGCAGAAATAGGAAGACAAGAAACTACAAGAGTAATACTACAACGAACTAGTATGTAAGGAAAAGCAAGATGACACCCAACTATTTATCAACTTTTTTCCCAAATTCGTGTCCTTCATAACCTCCTATCTAAGGCTGTTTTCTCGATAAGTTTAACCTCATCATGCCCTATCTAATCACCTCTACCTTATGCTTCTTCGGACTATTTGTTCCTATCTGAATTTATCCATAGTCAACCTCTCACACCTCCTCGCTGGGGCATATGTTCCTTTCCTCTACACATTTACAGACCATCTCAGTTTTTTTCTTGCATCTTATCCTTCACCGGGGCTACTTCCACCTCACCCAAATATCTTTACTTCTAATACTATCTCTGTGAGTATGCCCACACATCTATCTCAACATACTCATTCCCGCAACTTCCATTTTATGATTGTGGGGGTTCTTAGCTAGCTAACATTCTGGCAATACAACATAGTTGGTCTAAACACCACTATGTATAACTTGCCTTAAGTTTCAATGGCACTTTCTTAGCACACAACACTTCGGAGGCAAGCCTCCACATCCACCCTGCACCTAAACGATGTGTGATGTTGTCATCAGGAACCTTCTTAGATTACACTTTACATCATTTGTCATTATACAGATGTAAAATTTAGTCAACATTAGAGCCAAATTTTTCGTTGTCAATCAGAGCATTATGAGATCTTACAAATTACTATGCCTCGGTCCAATTTATGTGATACCCTCCATTTTTGAGAGTCAATTTGTCGAAACTTGATGCTAGATTGAATTAGATTAGATGTTTAAAACTCTACAAAATTTACTATAAATTGCAAGTTTAACTGAGATTAATATTTTTAAGCATAACTATATATGAAGAACATAAATTGATTCTGGAGGTTCATTTAATGCATTTAATTTTTTTTCCTCAACTTCTTCTAAAACTGAACTTATCACCACGTTTAACTCGCATAAAGTCTTGCACCATGAAATATCACGCATGAAATTAAAACCTAATAAATACACCAAAAAACTATTATTGTCTATAACTACTGAAATTATATGCTCACAAATTCATATAAATGCCAATATTTTCCAGTTTATGGTTTTAACTGAGTTGTAATTATTTGACATAATTCAATTCATTTTAATTTATAGAATGTTGAATGGCTTTTTTCACTCTGTGTTAGATAACATGCTACTTGTCCAATCCAATAACTTTTGTCAGTTTGTCTGTTCGGGTAAGGTGATTAGAAGTCAAAGTTGTTAGTTTGAATATAGTCCATCTTGATTGACATGATGTATGCCCAAAACTGATTGCTTTAGAACGTCTGTTCAGTTTTGGTAGTTTAAACGTTGAGCTATAGTTAGCCATTTTGTAGGTCTCTATGTGCGGTTTACGTAGGTGAAACAGTCATTTCATATCTTTTGTATTATCTTAGAGACTGATAAATAAGAAAACGTCTTGCGGTAAAGGATGAATGGATTATCACATAAAGTTTATTGCTTTACTGTTAAGCCAAAAGACACTTATTGTTGGATGGTCATTCATCGTTGATATTGAGGGAGATGAAGAAGTGCAATTACTTTAAATATGAAAAATAGGAACTTCTATCAAAATGTGCGTTATTCCTCGTTACATGTGTTCATGCAGTGATACATATTATATATGTGACGCTAGTATGTGTATCAATTTGCTCATCATACTAATTTTGTTCCTGAAGGTTTTCTTGACGTCCTCTTTGGTTTCCATTCCTTACATCAGTAGGAGATGTAATGAATTCACACAAGTAGCAACAGATAAGGAAAATTATATTAGGACTCATTATAAGGAAGGAAATTAAGAAAGAACTGGGATAAAATCTGAAGCAACGATGCACCAATCACTACTCTACCAAGTGACTGCATCCTTCAGAACTTACCTATCTTGCAGGAAAAAGGGAAGTTGCAAATTTTGCAAATTCTTTTTCTACATCAATATTTATTTTAGGATAAATTACAGCCCAAACCTTTGGGCCATCTAGTTAATAAAATATGTACAGTTTATAGGTAGTGTCTACTTCGGTTTAGGTTTGGTAAACTAGATGGCCGAAGTTTACATCTTCTCAAGTATCCCTTTATTCTATCCTATTGCCATTCACATAATTATGGGGTGTGAGATTCTAGGTCCCGTTGGAGTTTATTAGGTAGCTGTCTGGTGTTTGGCTGGCTGGGTATTTCCTTGGTTTCGTTGGTGTAGAAGTGGATCGCACATGGGGGTTGCCCAAGACCCATCAATCCTCCCACACTCAATGTGAGACTCAACAGAACCTCCGCACGCCTGGGATTGGTCTTTTAGAATGTGGACAATGTAACTTGGGGGGGGGGGGGCAACATCGGATAAACAAAGAATTGGGATGAACCTTTCTCAGATACCATGATAAAAAAATTTCAACTGCAATATATTGATCAAGAGGTGAGGATTTTCAAAACCATATAAAGAGACCTAATCAACCCTCACACGATGTGGGACTCGACGGTAACATTTGGCAGTTGCTATATCAGAGATTTACTAAGGTTGCAACGCAAAAGTTTTTCCCTATCCTAGGAATATTTTCATGTTAAATACATTACGTGATTTATTTCCATATTTTCTGCATTCAATTCTAGCTTCTGCACCTTCTAATCAAATTGAACAACTAATGGGATATACTCACTATTTTACTAAAAATGGATCAAAGTGAATTTGTTTTGTTCTTCTGCTAAAAGTTTTCTTTATACGGATAAGATTCAACATTTACTGTATGAGAGATTTGTAAGGTTTCAGACTTAAAAGCTTTTCCTACTCTCCAGGCATCTTAGTATGTTTATTATTGTAAGCTATATGGAAGGGGCATTATGCATTTAAGTGGAAAGTCGTCTCCTTGAGTGATGACACTGAAAACGCTGCTATGATGTAGATGTCAGATCTTTTGACTTTTGTTTGTGGTCTCTGTCGATGAATCCTCCCTCCTTTTCTCTCCCCTACTGGTATATTCCCCAAACCCTTGAAAGGCTTCATTGGAAAACATAAGCTAAAGGCTGGTTGAGGATGTTCCCAATGGCAAGGCAATCCTCTGAAAGTGGGGGATTTGGTTTGCATATAAGACTATGTGAGCATAGAAATTGGTTTATTATAAGGTCAATGGATGTTAGTGTAATATAGTTCAATGTAGCTTCTATTGTCATATTTGTTGACATAGTAATGAGATGTACTATACTTTTTCTTAACTCTCTGATTGCTTAGCTTTTATTAAGCAAATGTGTGCAGGCATGTGATGGTAGTTGCTTGCACGAAAGATGCTTCCTTTTTTGTTGTTTGCATATATCTATCCTAAACCTCAGATTTTTTTTTCTCCAAAGAATGGTGGGAAATCTTTGTATGACACCCCCCTCCCCCCTCCCGACGACTATTTGGTTCCAACATTTCCTTGATTGAGTTGCATTTGTCTTTGGTAATGAATGTGGTTGAGTGTCAAATTATGCTGATATGTCAAAGCAAACAAGCTTGAGAAATGTCCTGACTAGGTGGTGCAGCTTGTGGAATATGATTGTTTAGTTTGTTTTATTTTATCAATTTTGTGATATCTTTACTCATGAAATGTCTCATTTTATGGTTGGGAGTCTCGATTTATGTTGTTCTACATTATATTTAGGCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAGGTATCTCTTTAGTCTTTAGTTCTCACGCTTTATCTCTTGATAGGAGCGATATCTTATCTTCTGTGTTCAGTATAATTCTTACTAATTGATGTGTCTTTATTATTTTTTTTTCTATTTAAATTGTTGTTCAGAAAAGTCGTGATGCCTTCCTCACAAAGTCTAATTGTTGCTCTTTGATTTTGTACGCCTTTAAATGTTACAATTACTTTATCCTCCCTCCTCCCTGGAAAATTGAAAGTTAAAGTCCTCTTAAGACTGGTACTGAATCTCTGTGAAAATCTGATTCATTTTTAATCTATCAATATTGTTGCTGATTCACCATTATGTCTGCTGTTGCATTGCAGAGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGTTGCATGGGTGGGATTTGCAAAATCTAATATGCCTCCACCACCACCACCGCATCCACAGTGAAACCCATAATACAGCTTAGCTTTACTGGTGAAGATACTCTATTAGAGTTTTTCCTTTTGCATAAACAGGACCCTAGGCATTAATGCCTGTCATTTAGCTAGTTACTGAAACTTTATAACTTTCTGGTGAAAACTTTGA</genome_strand>
        <mrna_strand>ACCGACTGATAAAAACTAAGCAAGGGCAAAAGGATTTAGCTAGAACCCTAAACTGATCGAATCGAAGCAACTCAACAATGGAGATGCAAAGCGAATTCGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGAT..........................................................................................................................................................AACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTG.......................................................................................................................................................................................................................ATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCG....................................................................................GATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAG........................................................................................................................................................................................................................................................................................................................................................AGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGTTGCATGGGTGGGATTTGCAAAATCTAATATGCCTCCACCACCACCACCGCATCCACAGTGAAACCCATAATACAGCTTAGCTTTACTGGTGAAGATACTCTATTAGAGTTTTTCCTTTTGCATAAACAGGACCCTAGGCATTAATGCCTGTCATTTAGCTAGTTACTGAAACTTTATAACTTTCTGGTGAAAACTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E278312" ref_strand="-" ref_description="SGN-E278312 [cLEL-2-O19](-)">
      <seq>gcacgagaaactaagcaagggcaaaaggatttagctagaaccctaaactgatggaatcgaagcaactcaacaatggacctgcacaccgaattagatcgtctccttttcttcgaacacgctcggaagagtgctgaaaccgcctatgctcagaatcccctagatgctgataacttgacgaggtggggaggtgcattgctggaattatcacagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="17665" stop="18625"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17960" g_stop="18127" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="168" r_length="168" r_score="0.929"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18128" i_stop="18281" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18282" g_stop="18325" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="212" r_length="44" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E278312" ref_strand="-">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>212</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E278312" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="17960" e_stop="18127"/>
          <exon e_start="18282" e_stop="18325"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGATAAAAACTAAGCAAGGGCAAAAGGATTTAGCTAGAACCCTAAACTGATCGAATCGAAGCAACTCAACAATGGAGATGCAAAGCGAATTCGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGATGTCCGTATCTCCTCTTTCTCTTCATTTATCATTTCTGTTTTATCGTTCTAATTTTCGATTTCAGCTGTTTGATGTGTTTTTGTGTTTAATTTGAACTTCGATGCATTGTTGAATGAATGAGTTTGTTGTTTCTGATATATGATGATGAATGCAGAACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTT</genome_strand>
        <mrna_strand>GCACGAGAAACTAAGCAAGGGCAAAAGGATTTAGCTAGAACCCTAAACTGATGGAATCGAAGCAACTCAACAATGGACCTGCACACCGAATTAGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGAT..........................................................................................................................................................AACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E267064" ref_strand="+" ref_description="SGN-E267064 [cLEI-4-C12]">
      <seq>aaaaactaagcaagggcaaaaggatttagctagaaccctaaactgatcgaatcgaagcaactcaacaatggagatgcaaagcgaattcgatcgtctccttttcttcgaacacgctcggaagagtgctgaaaccgcctatgctcagaatcccctagatgctgataacttgacgaggtggggaggtgcattgctggaattatcacagtttcagcccgtagctgaatcgaaacaaatgatttctgatgcaacatcaaagttggaggaggcattgacagtgaaccctgaaaagcatgatgcgctttggtgtttgggaaatgctcatacatcacatgcttttttaactcctgatatggatgaggctaaggtttactttgaaaaagcaactcagtgctttcaacaggcatttgatgcggatccctcaaatgacctttaccgcaaatctctggaagttactgctaaggctccagaattgcacatggaaatccacagacatggtcccatgcaacaacctatggcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="17665" stop="23631"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17965" g_stop="18127" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="163" r_length="163" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18128" i_stop="18281" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18282" g_stop="18360" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="242" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18361" i_stop="18575" i_length="215">
            <donor d_prob="0.785" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18576" g_stop="18745" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="412" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18746" i_stop="18829" i_length="84">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18830" g_stop="18877" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="460" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18878" i_stop="23272" i_length="4395">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="23273" g_stop="23331" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="519" r_length="59" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E267064" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267064" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17965" e_stop="18127"/>
          <exon e_start="18282" e_stop="18360"/>
          <exon e_start="18576" e_stop="18745"/>
          <exon e_start="18830" e_stop="18877"/>
          <exon e_start="23273" e_stop="23331"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACTAAGCAAGGGCAAAAGGATTTAGCTAGAACCCTAAACTGATCGAATCGAAGCAACTCAACAATGGAGATGCAAAGCGAATTCGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGATGTCCGTATCTCCTCTTTCTCTTCATTTATCATTTCTGTTTTATCGTTCTAATTTTCGATTTCAGCTGTTTGATGTGTTTTTGTGTTTAATTTGAACTTCGATGCATTGTTGAATGAATGAGTTTGTTGTTTCTGATATATGATGATGAATGCAGAACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTGGTATTGAGTTGCTTGAATTTTTGGTACTTGATTAAATAGTTTGTTATAAATTAGATTTTTCTAGTATCTGTTAGTTAAACCTATAATGTGTTTCTTCAGCCCAAAAAATGTTCTTCTTTTGTTTGCTGTTTTGGTTTGTTTCTGAAATTCTAAGAGACTGATGAAGTGTGTATTTGTTGTCGTTTACTATATGTTTTGGGGACTTAACTTGGCAGATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCGGTATATTTTTATCAATAGACATTCCAAATGTATTTGCTCCTGAACTGTTGGAAGTAGCTTAGATTTTTGTTACTCTGAATGCAGGATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAGGTGAAACTTTTGTTGTTCTTTAGCTAAGTGTCGATATGTTTAATGCTTTGCATCTTTATGTTGTATTTAGGTATTCCAAATGAATGATATCAAACTGATACACGTGGTTGTGTGCCATTGCCTTTTTCTCGCTTATTCCCCTTTTTTGCACTCAATTCTTTTTTTTTTCATGTTCATTCCTACATGGTCCTTTGTAATTGGTGTATATCGATATTGTGTTAATTTTTTGTGTATCTTTTCTTGCCCCTGACTTCCTCCTATCCATATTATGGTATTTTTAGCTTTTACATTTAGTCCAAAATAGATAGTTTTTAACATAAGCAAGAAGTTATTAATAGTTCTTTTCCAAATTTTCACTTAGATAAGTGAATTTTTACCTAACCAAGAAATCATGTTAAAGTAAAATTATTTTATCAAGGTGCAATCACTTATCTCAACGAGTAAGTGATTTCTTAAAAGGGTATGTCCAGGCTTAAAATACCATAGATATGGAATGAAGGGGGTATTGCACGTAGGCCTTACCCCTATCTTCGGAAGTACAAAGGTGGTTTTTGATAAGATCCTTGACTCATGGAAAAGCAATTTAAAGTAGATTGAAAAGAAATTACGAAGTGGACAAGCCATGGAAAAATTCTATAGAGAGCATGAGAAAACACTCTGAAAAGGTGTCGTAACTACAACAAAATACTATTATAATTGAAGTACAAGAAACATGTTGTAGCAGAAATAGGAAGACAAGAAACTACAAGAGTAATACTACAACGAACTAGTATGTAAGGAAAAGCAAGATGACACCCAACTATTTATCAACTTTTTTCCCAAATTCGTGTCCTTCATAACCTCCTATCTAAGGCTGTTTTCTCGATAAGTTTAACCTCATCATGCCCTATCTAATCACCTCTACCTTATGCTTCTTCGGACTATTTGTTCCTATCTGAATTTATCCATAGTCAACCTCTCACACCTCCTCGCTGGGGCATATGTTCCTTTCCTCTACACATTTACAGACCATCTCAGTTTTTTTCTTGCATCTTATCCTTCACCGGGGCTACTTCCACCTCACCCAAATATCTTTACTTCTAATACTATCTCTGTGAGTATGCCCACACATCTATCTCAACATACTCATTCCCGCAACTTCCATTTTATGATTGTGGGGGTTCTTAGCTAGCTAACATTCTGGCAATACAACATAGTTGGTCTAAACACCACTATGTATAACTTGCCTTAAGTTTCAATGGCACTTTCTTAGCACACAACACTTCGGAGGCAAGCCTCCACATCCACCCTGCACCTAAACGATGTGTGATGTTGTCATCAGGAACCTTCTTAGATTACACTTTACATCATTTGTCATTATACAGATGTAAAATTTAGTCAACATTAGAGCCAAATTTTTCGTTGTCAATCAGAGCATTATGAGATCTTACAAATTACTATGCCTCGGTCCAATTTATGTGATACCCTCCATTTTTGAGAGTCAATTTGTCGAAACTTGATGCTAGATTGAATTAGATTAGATGTTTAAAACTCTACAAAATTTACTATAAATTGCAAGTTTAACTGAGATTAATATTTTTAAGCATAACTATATATGAAGAACATAAATTGATTCTGGAGGTTCATTTAATGCATTTAATTTTTTTTCCTCAACTTCTTCTAAAACTGAACTTATCACCACGTTTAACTCGCATAAAGTCTTGCACCATGAAATATCACGCATGAAATTAAAACCTAATAAATACACCAAAAAACTATTATTGTCTATAACTACTGAAATTATATGCTCACAAATTCATATAAATGCCAATATTTTCCAGTTTATGGTTTTAACTGAGTTGTAATTATTTGACATAATTCAATTCATTTTAATTTATAGAATGTTGAATGGCTTTTTTCACTCTGTGTTAGATAACATGCTACTTGTCCAATCCAATAACTTTTGTCAGTTTGTCTGTTCGGGTAAGGTGATTAGAAGTCAAAGTTGTTAGTTTGAATATAGTCCATCTTGATTGACATGATGTATGCCCAAAACTGATTGCTTTAGAACGTCTGTTCAGTTTTGGTAGTTTAAACGTTGAGCTATAGTTAGCCATTTTGTAGGTCTCTATGTGCGGTTTACGTAGGTGAAACAGTCATTTCATATCTTTTGTATTATCTTAGAGACTGATAAATAAGAAAACGTCTTGCGGTAAAGGATGAATGGATTATCACATAAAGTTTATTGCTTTACTGTTAAGCCAAAAGACACTTATTGTTGGATGGTCATTCATCGTTGATATTGAGGGAGATGAAGAAGTGCAATTACTTTAAATATGAAAAATAGGAACTTCTATCAAAATGTGCGTTATTCCTCGTTACATGTGTTCATGCAGTGATACATATTATATATGTGACGCTAGTATGTGTATCAATTTGCTCATCATACTAATTTTGTTCCTGAAGGTTTTCTTGACGTCCTCTTTGGTTTCCATTCCTTACATCAGTAGGAGATGTAATGAATTCACACAAGTAGCAACAGATAAGGAAAATTATATTAGGACTCATTATAAGGAAGGAAATTAAGAAAGAACTGGGATAAAATCTGAAGCAACGATGCACCAATCACTACTCTACCAAGTGACTGCATCCTTCAGAACTTACCTATCTTGCAGGAAAAAGGGAAGTTGCAAATTTTGCAAATTCTTTTTCTACATCAATATTTATTTTAGGATAAATTACAGCCCAAACCTTTGGGCCATCTAGTTAATAAAATATGTACAGTTTATAGGTAGTGTCTACTTCGGTTTAGGTTTGGTAAACTAGATGGCCGAAGTTTACATCTTCTCAAGTATCCCTTTATTCTATCCTATTGCCATTCACATAATTATGGGGTGTGAGATTCTAGGTCCCGTTGGAGTTTATTAGGTAGCTGTCTGGTGTTTGGCTGGCTGGGTATTTCCTTGGTTTCGTTGGTGTAGAAGTGGATCGCACATGGGGGTTGCCCAAGACCCATCAATCCTCCCACACTCAATGTGAGACTCAACAGAACCTCCGCACGCCTGGGATTGGTCTTTTAGAATGTGGACAATGTAACTTGGGGGGGGGGGGGCAACATCGGATAAACAAAGAATTGGGATGAACCTTTCTCAGATACCATGATAAAAAAATTTCAACTGCAATATATTGATCAAGAGGTGAGGATTTTCAAAACCATATAAAGAGACCTAATCAACCCTCACACGATGTGGGACTCGACGGTAACATTTGGCAGTTGCTATATCAGAGATTTACTAAGGTTGCAACGCAAAAGTTTTTCCCTATCCTAGGAATATTTTCATGTTAAATACATTACGTGATTTATTTCCATATTTTCTGCATTCAATTCTAGCTTCTGCACCTTCTAATCAAATTGAACAACTAATGGGATATACTCACTATTTTACTAAAAATGGATCAAAGTGAATTTGTTTTGTTCTTCTGCTAAAAGTTTTCTTTATACGGATAAGATTCAACATTTACTGTATGAGAGATTTGTAAGGTTTCAGACTTAAAAGCTTTTCCTACTCTCCAGGCATCTTAGTATGTTTATTATTGTAAGCTATATGGAAGGGGCATTATGCATTTAAGTGGAAAGTCGTCTCCTTGAGTGATGACACTGAAAACGCTGCTATGATGTAGATGTCAGATCTTTTGACTTTTGTTTGTGGTCTCTGTCGATGAATCCTCCCTCCTTTTCTCTCCCCTACTGGTATATTCCCCAAACCCTTGAAAGGCTTCATTGGAAAACATAAGCTAAAGGCTGGTTGAGGATGTTCCCAATGGCAAGGCAATCCTCTGAAAGTGGGGGATTTGGTTTGCATATAAGACTATGTGAGCATAGAAATTGGTTTATTATAAGGTCAATGGATGTTAGTGTAATATAGTTCAATGTAGCTTCTATTGTCATATTTGTTGACATAGTAATGAGATGTACTATACTTTTTCTTAACTCTCTGATTGCTTAGCTTTTATTAAGCAAATGTGTGCAGGCATGTGATGGTAGTTGCTTGCACGAAAGATGCTTCCTTTTTTGTTGTTTGCATATATCTATCCTAAACCTCAGATTTTTTTTTCTCCAAAGAATGGTGGGAAATCTTTGTATGACACCCCCCTCCCCCCTCCCGACGACTATTTGGTTCCAACATTTCCTTGATTGAGTTGCATTTGTCTTTGGTAATGAATGTGGTTGAGTGTCAAATTATGCTGATATGTCAAAGCAAACAAGCTTGAGAAATGTCCTGACTAGGTGGTGCAGCTTGTGGAATATGATTGTTTAGTTTGTTTTATTTTATCAATTTTGTGATATCTTTACTCATGAAATGTCTCATTTTATGGTTGGGAGTCTCGATTTATGTTGTTCTACATTATATTTAGGCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGC</genome_strand>
        <mrna_strand>AAAAACTAAGCAAGGGCAAAAGGATTTAGCTAGAACCCTAAACTGATCGAATCGAAGCAACTCAACAATGGAGATGCAAAGCGAATTCGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGAT..........................................................................................................................................................AACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTG.......................................................................................................................................................................................................................ATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCG....................................................................................GATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E319674" ref_strand="+" ref_description="SGN-E319674 [cTOB-12-B2]">
      <seq>aactaagcaagggcaaaaggatttagctagaaccctaaactgatcgaatcgaagcaactcaacaatggagatgcaaagcgaattcgatcgtctccttttcttcgaacacgctcggaagagtgctgaaaccgcctatgctcagaatcccctagatgctgataacttgacgaggtggggaggtgcattgctggaattatcacagtttcagcccgtagctgaatcgaaacaaatgatttctgatgcaacatcaaagttggaggaggcattgacagtgaaccctgaaaagcatgatgcgctttggtgtttgggaaatgctcatacatcacatgcttttttaactcctgatatggatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="17668" stop="18989"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17968" g_stop="18127" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18128" i_stop="18281" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18282" g_stop="18360" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="239" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18361" i_stop="18575" i_length="215">
            <donor d_prob="0.785" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18576" g_stop="18689" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="353" r_length="114" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E319674" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>353</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E319674" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17968" e_stop="18127"/>
          <exon e_start="18282" e_stop="18360"/>
          <exon e_start="18576" e_stop="18689"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTAAGCAAGGGCAAAAGGATTTAGCTAGAACCCTAAACTGATCGAATCGAAGCAACTCAACAATGGAGATGCAAAGCGAATTCGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGATGTCCGTATCTCCTCTTTCTCTTCATTTATCATTTCTGTTTTATCGTTCTAATTTTCGATTTCAGCTGTTTGATGTGTTTTTGTGTTTAATTTGAACTTCGATGCATTGTTGAATGAATGAGTTTGTTGTTTCTGATATATGATGATGAATGCAGAACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTGGTATTGAGTTGCTTGAATTTTTGGTACTTGATTAAATAGTTTGTTATAAATTAGATTTTTCTAGTATCTGTTAGTTAAACCTATAATGTGTTTCTTCAGCCCAAAAAATGTTCTTCTTTTGTTTGCTGTTTTGGTTTGTTTCTGAAATTCTAAGAGACTGATGAAGTGTGTATTTGTTGTCGTTTACTATATGTTTTGGGGACTTAACTTGGCAGATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATG</genome_strand>
        <mrna_strand>AACTAAGCAAGGGCAAAAGGATTTAGCTAGAACCCTAAACTGATCGAATCGAAGCAACTCAACAATGGAGATGCAAAGCGAATTCGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGAT..........................................................................................................................................................AACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTG.......................................................................................................................................................................................................................ATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E712434" ref_strand="+" ref_description="SGN-E712434 [FB04DD05]">
      <seq>caagggcaaaaggatttagctagaaccctaaactgatcgaatcgaagcaactcaacaatggagatgcaaagcgaattcgatcgtctccttttcttcgaacacgctcggaagagtgctgaaaccgcctatgctcagaatcccctagatgctgataacttgacgaggtggggaggtgcattgctggaattatcacagtttcagcccgtagctgaatcgaaacaaatgatttctgatgcaacatcaaagttggaggaggcattgacagtgaaccctgaaaagcatgatgcgctttggtgtttgggaaatgctcatacatcacatgcttttttaactcctgatatggatgaggctaaggtttactttgaaaaagcaactcagtgctttcaacaggcatttgatgcggatccctcaaatgacctttaccgcaaatctctggaagttactgctaaggctccagaattgcacatggaaatccacagacatggtcccatgcaacaacctatggcagcagaaccttcaacatcgacaagcacaaagagttcaaaaaagaagaagagcagtgatctcaagtatgacatttttgggtgggtcatacttgccgttggcattgttgcatgggtgggatttgcaaaatctaatatgcctccaccaccaccaccgcatccactgaaacccataatacagcttagctttactggtgaagatactctattagagtttttccttttgcataaacaggaccctaggcattaatgcctgtcatttagctagttactgaaactttataactttctggtgaaaactttgaagactttttttctgttgtaatagattaaataagactttttttctggtgtgatagatcaaataagactttttcttttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="17675" stop="24354"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17975" g_stop="18127" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="153" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18128" i_stop="18281" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18282" g_stop="18360" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="232" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18361" i_stop="18575" i_length="215">
            <donor d_prob="0.785" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18576" g_stop="18745" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="402" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18746" i_stop="18829" i_length="84">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18830" g_stop="18877" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="450" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18878" i_stop="23272" i_length="4395">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="23273" g_stop="23359" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="537" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="23360" i_stop="23703" i_length="344">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="23704" g_stop="24063" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="538" r_stop="895" r_length="358" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E712434" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>897</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E712434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17975" e_stop="18127"/>
          <exon e_start="18282" e_stop="18360"/>
          <exon e_start="18576" e_stop="18745"/>
          <exon e_start="18830" e_stop="18877"/>
          <exon e_start="23273" e_stop="23359"/>
          <exon e_start="23704" e_stop="24063"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGGGCAAAAGGATTTAGCTAGAACCCTAAACTGATCGAATCGAAGCAACTCAACAATGGAGATGCAAAGCGAATTCGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGATGTCCGTATCTCCTCTTTCTCTTCATTTATCATTTCTGTTTTATCGTTCTAATTTTCGATTTCAGCTGTTTGATGTGTTTTTGTGTTTAATTTGAACTTCGATGCATTGTTGAATGAATGAGTTTGTTGTTTCTGATATATGATGATGAATGCAGAACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTGGTATTGAGTTGCTTGAATTTTTGGTACTTGATTAAATAGTTTGTTATAAATTAGATTTTTCTAGTATCTGTTAGTTAAACCTATAATGTGTTTCTTCAGCCCAAAAAATGTTCTTCTTTTGTTTGCTGTTTTGGTTTGTTTCTGAAATTCTAAGAGACTGATGAAGTGTGTATTTGTTGTCGTTTACTATATGTTTTGGGGACTTAACTTGGCAGATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCGGTATATTTTTATCAATAGACATTCCAAATGTATTTGCTCCTGAACTGTTGGAAGTAGCTTAGATTTTTGTTACTCTGAATGCAGGATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAGGTGAAACTTTTGTTGTTCTTTAGCTAAGTGTCGATATGTTTAATGCTTTGCATCTTTATGTTGTATTTAGGTATTCCAAATGAATGATATCAAACTGATACACGTGGTTGTGTGCCATTGCCTTTTTCTCGCTTATTCCCCTTTTTTGCACTCAATTCTTTTTTTTTTCATGTTCATTCCTACATGGTCCTTTGTAATTGGTGTATATCGATATTGTGTTAATTTTTTGTGTATCTTTTCTTGCCCCTGACTTCCTCCTATCCATATTATGGTATTTTTAGCTTTTACATTTAGTCCAAAATAGATAGTTTTTAACATAAGCAAGAAGTTATTAATAGTTCTTTTCCAAATTTTCACTTAGATAAGTGAATTTTTACCTAACCAAGAAATCATGTTAAAGTAAAATTATTTTATCAAGGTGCAATCACTTATCTCAACGAGTAAGTGATTTCTTAAAAGGGTATGTCCAGGCTTAAAATACCATAGATATGGAATGAAGGGGGTATTGCACGTAGGCCTTACCCCTATCTTCGGAAGTACAAAGGTGGTTTTTGATAAGATCCTTGACTCATGGAAAAGCAATTTAAAGTAGATTGAAAAGAAATTACGAAGTGGACAAGCCATGGAAAAATTCTATAGAGAGCATGAGAAAACACTCTGAAAAGGTGTCGTAACTACAACAAAATACTATTATAATTGAAGTACAAGAAACATGTTGTAGCAGAAATAGGAAGACAAGAAACTACAAGAGTAATACTACAACGAACTAGTATGTAAGGAAAAGCAAGATGACACCCAACTATTTATCAACTTTTTTCCCAAATTCGTGTCCTTCATAACCTCCTATCTAAGGCTGTTTTCTCGATAAGTTTAACCTCATCATGCCCTATCTAATCACCTCTACCTTATGCTTCTTCGGACTATTTGTTCCTATCTGAATTTATCCATAGTCAACCTCTCACACCTCCTCGCTGGGGCATATGTTCCTTTCCTCTACACATTTACAGACCATCTCAGTTTTTTTCTTGCATCTTATCCTTCACCGGGGCTACTTCCACCTCACCCAAATATCTTTACTTCTAATACTATCTCTGTGAGTATGCCCACACATCTATCTCAACATACTCATTCCCGCAACTTCCATTTTATGATTGTGGGGGTTCTTAGCTAGCTAACATTCTGGCAATACAACATAGTTGGTCTAAACACCACTATGTATAACTTGCCTTAAGTTTCAATGGCACTTTCTTAGCACACAACACTTCGGAGGCAAGCCTCCACATCCACCCTGCACCTAAACGATGTGTGATGTTGTCATCAGGAACCTTCTTAGATTACACTTTACATCATTTGTCATTATACAGATGTAAAATTTAGTCAACATTAGAGCCAAATTTTTCGTTGTCAATCAGAGCATTATGAGATCTTACAAATTACTATGCCTCGGTCCAATTTATGTGATACCCTCCATTTTTGAGAGTCAATTTGTCGAAACTTGATGCTAGATTGAATTAGATTAGATGTTTAAAACTCTACAAAATTTACTATAAATTGCAAGTTTAACTGAGATTAATATTTTTAAGCATAACTATATATGAAGAACATAAATTGATTCTGGAGGTTCATTTAATGCATTTAATTTTTTTTCCTCAACTTCTTCTAAAACTGAACTTATCACCACGTTTAACTCGCATAAAGTCTTGCACCATGAAATATCACGCATGAAATTAAAACCTAATAAATACACCAAAAAACTATTATTGTCTATAACTACTGAAATTATATGCTCACAAATTCATATAAATGCCAATATTTTCCAGTTTATGGTTTTAACTGAGTTGTAATTATTTGACATAATTCAATTCATTTTAATTTATAGAATGTTGAATGGCTTTTTTCACTCTGTGTTAGATAACATGCTACTTGTCCAATCCAATAACTTTTGTCAGTTTGTCTGTTCGGGTAAGGTGATTAGAAGTCAAAGTTGTTAGTTTGAATATAGTCCATCTTGATTGACATGATGTATGCCCAAAACTGATTGCTTTAGAACGTCTGTTCAGTTTTGGTAGTTTAAACGTTGAGCTATAGTTAGCCATTTTGTAGGTCTCTATGTGCGGTTTACGTAGGTGAAACAGTCATTTCATATCTTTTGTATTATCTTAGAGACTGATAAATAAGAAAACGTCTTGCGGTAAAGGATGAATGGATTATCACATAAAGTTTATTGCTTTACTGTTAAGCCAAAAGACACTTATTGTTGGATGGTCATTCATCGTTGATATTGAGGGAGATGAAGAAGTGCAATTACTTTAAATATGAAAAATAGGAACTTCTATCAAAATGTGCGTTATTCCTCGTTACATGTGTTCATGCAGTGATACATATTATATATGTGACGCTAGTATGTGTATCAATTTGCTCATCATACTAATTTTGTTCCTGAAGGTTTTCTTGACGTCCTCTTTGGTTTCCATTCCTTACATCAGTAGGAGATGTAATGAATTCACACAAGTAGCAACAGATAAGGAAAATTATATTAGGACTCATTATAAGGAAGGAAATTAAGAAAGAACTGGGATAAAATCTGAAGCAACGATGCACCAATCACTACTCTACCAAGTGACTGCATCCTTCAGAACTTACCTATCTTGCAGGAAAAAGGGAAGTTGCAAATTTTGCAAATTCTTTTTCTACATCAATATTTATTTTAGGATAAATTACAGCCCAAACCTTTGGGCCATCTAGTTAATAAAATATGTACAGTTTATAGGTAGTGTCTACTTCGGTTTAGGTTTGGTAAACTAGATGGCCGAAGTTTACATCTTCTCAAGTATCCCTTTATTCTATCCTATTGCCATTCACATAATTATGGGGTGTGAGATTCTAGGTCCCGTTGGAGTTTATTAGGTAGCTGTCTGGTGTTTGGCTGGCTGGGTATTTCCTTGGTTTCGTTGGTGTAGAAGTGGATCGCACATGGGGGTTGCCCAAGACCCATCAATCCTCCCACACTCAATGTGAGACTCAACAGAACCTCCGCACGCCTGGGATTGGTCTTTTAGAATGTGGACAATGTAACTTGGGGGGGGGGGGGCAACATCGGATAAACAAAGAATTGGGATGAACCTTTCTCAGATACCATGATAAAAAAATTTCAACTGCAATATATTGATCAAGAGGTGAGGATTTTCAAAACCATATAAAGAGACCTAATCAACCCTCACACGATGTGGGACTCGACGGTAACATTTGGCAGTTGCTATATCAGAGATTTACTAAGGTTGCAACGCAAAAGTTTTTCCCTATCCTAGGAATATTTTCATGTTAAATACATTACGTGATTTATTTCCATATTTTCTGCATTCAATTCTAGCTTCTGCACCTTCTAATCAAATTGAACAACTAATGGGATATACTCACTATTTTACTAAAAATGGATCAAAGTGAATTTGTTTTGTTCTTCTGCTAAAAGTTTTCTTTATACGGATAAGATTCAACATTTACTGTATGAGAGATTTGTAAGGTTTCAGACTTAAAAGCTTTTCCTACTCTCCAGGCATCTTAGTATGTTTATTATTGTAAGCTATATGGAAGGGGCATTATGCATTTAAGTGGAAAGTCGTCTCCTTGAGTGATGACACTGAAAACGCTGCTATGATGTAGATGTCAGATCTTTTGACTTTTGTTTGTGGTCTCTGTCGATGAATCCTCCCTCCTTTTCTCTCCCCTACTGGTATATTCCCCAAACCCTTGAAAGGCTTCATTGGAAAACATAAGCTAAAGGCTGGTTGAGGATGTTCCCAATGGCAAGGCAATCCTCTGAAAGTGGGGGATTTGGTTTGCATATAAGACTATGTGAGCATAGAAATTGGTTTATTATAAGGTCAATGGATGTTAGTGTAATATAGTTCAATGTAGCTTCTATTGTCATATTTGTTGACATAGTAATGAGATGTACTATACTTTTTCTTAACTCTCTGATTGCTTAGCTTTTATTAAGCAAATGTGTGCAGGCATGTGATGGTAGTTGCTTGCACGAAAGATGCTTCCTTTTTTGTTGTTTGCATATATCTATCCTAAACCTCAGATTTTTTTTTCTCCAAAGAATGGTGGGAAATCTTTGTATGACACCCCCCTCCCCCCTCCCGACGACTATTTGGTTCCAACATTTCCTTGATTGAGTTGCATTTGTCTTTGGTAATGAATGTGGTTGAGTGTCAAATTATGCTGATATGTCAAAGCAAACAAGCTTGAGAAATGTCCTGACTAGGTGGTGCAGCTTGTGGAATATGATTGTTTAGTTTGTTTTATTTTATCAATTTTGTGATATCTTTACTCATGAAATGTCTCATTTTATGGTTGGGAGTCTCGATTTATGTTGTTCTACATTATATTTAGGCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAGGTATCTCTTTAGTCTTTAGTTCTCACGCTTTATCTCTTGATAGGAGCGATATCTTATCTTCTGTGTTCAGTATAATTCTTACTAATTGATGTGTCTTTATTATTTTTTTTTCTATTTAAATTGTTGTTCAGAAAAGTCGTGATGCCTTCCTCACAAAGTCTAATTGTTGCTCTTTGATTTTGTACGCCTTTAAATGTTACAATTACTTTATCCTCCCTCCTCCCTGGAAAATTGAAAGTTAAAGTCCTCTTAAGACTGGTACTGAATCTCTGTGAAAATCTGATTCATTTTTAATCTATCAATATTGTTGCTGATTCACCATTATGTCTGCTGTTGCATTGCAGAGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGTTGCATGGGTGGGATTTGCAAAATCTAATATGCCTCCACCACCACCACCGCATCCACAGTGAAACCCATAATACAGCTTAGCTTTACTGGTGAAGATACTCTATTAGAGTTTTTCCTTTTGCATAAACAGGACCCTAGGCATTAATGCCTGTCATTTAGCTAGTTACTGAAACTTTATAACTTTCTGGTGAAAACTTTGAAGACTTTTTTTCTGTTGTAATAGATTAAATAAGACTTTTTTTCTGTTGTGATAGATCAAATAAGACTTTTTCTTTTAATCTCGGGAT</genome_strand>
        <mrna_strand>CAAGGGCAAAAGGATTTAGCTAGAACCCTAAACTGATCGAATCGAAGCAACTCAACAATGGAGATGCAAAGCGAATTCGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGAT..........................................................................................................................................................AACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTG.......................................................................................................................................................................................................................ATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCG....................................................................................GATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAG........................................................................................................................................................................................................................................................................................................................................................AGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGTTGCATGGGTGGGATTTGCAAAATCTAATATGCCTCCACCACCACCACCGCATCCAC--TGAAACCCATAATACAGCTTAGCTTTACTGGTGAAGATACTCTATTAGAGTTTTTCCTTTTGCATAAACAGGACCCTAGGCATTAATGCCTGTCATTTAGCTAGTTACTGAAACTTTATAACTTTCTGGTGAAAACTTTGAAGACTTTTTTTCTGTTGTAATAGATTAAATAAGACTTTTTTTCTGGTGTGATAGATCAAATAAGACTTTTTCTTTTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E310135" ref_strand="+" ref_description="SGN-E310135 [cLEZ-8-E21]">
      <seq>gcaaaaggatttagctagaaccctaaactgatcgaatcgaagcaactcaacaatggagatgcaaagcgaattcgatcgtctccttttcttcgaacacgctcggaagagtgctgaaaccgcctatgctcagaatcccctagatgctgataacttgacgaggtggggaggtgcattgctggaattatcacagtttcagcccgtagctgaatcgaaacaaatgatttctgatgcaacatcaaagttggaggaggcattgacagtgaaccctgaaaagcatgatgcgctttggtgtttgggaaatgctcatacatcacatgcttttttaactcctgatatggatgaggctaaggtttactttgaaaaagcaactcagtgctttcaacaggcatttgatgcggatccctcaaatgacctttaccgcaaatctctggaagttactgctaaggctccagaattgcacatggaaatccacagacatggtcccatgcaacaacctatggcagcagaaccttcaacatcgacaagcacaaagagttcaaaaaagaagaagagcagtgatctcaagtatgacattttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="17680" stop="24048"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17980" g_stop="18127" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="148" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18128" i_stop="18281" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18282" g_stop="18360" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="227" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18361" i_stop="18575" i_length="215">
            <donor d_prob="0.785" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18576" g_stop="18745" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="397" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18746" i_stop="18829" i_length="84">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18830" g_stop="18877" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="398" r_stop="445" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18878" i_stop="23272" i_length="4395">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="23273" g_stop="23359" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="446" r_stop="532" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="23360" i_stop="23703" i_length="344">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="23704" g_stop="23748" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="533" r_stop="577" r_length="45" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E310135" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>577</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E310135" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17980" e_stop="18127"/>
          <exon e_start="18282" e_stop="18360"/>
          <exon e_start="18576" e_stop="18745"/>
          <exon e_start="18830" e_stop="18877"/>
          <exon e_start="23273" e_stop="23359"/>
          <exon e_start="23704" e_stop="23748"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAAAGGATTTAGCTAGAACCCTAAACTGATCGAATCGAAGCAACTCAACAATGGAGATGCAAAGCGAATTCGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGATGTCCGTATCTCCTCTTTCTCTTCATTTATCATTTCTGTTTTATCGTTCTAATTTTCGATTTCAGCTGTTTGATGTGTTTTTGTGTTTAATTTGAACTTCGATGCATTGTTGAATGAATGAGTTTGTTGTTTCTGATATATGATGATGAATGCAGAACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTGGTATTGAGTTGCTTGAATTTTTGGTACTTGATTAAATAGTTTGTTATAAATTAGATTTTTCTAGTATCTGTTAGTTAAACCTATAATGTGTTTCTTCAGCCCAAAAAATGTTCTTCTTTTGTTTGCTGTTTTGGTTTGTTTCTGAAATTCTAAGAGACTGATGAAGTGTGTATTTGTTGTCGTTTACTATATGTTTTGGGGACTTAACTTGGCAGATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCGGTATATTTTTATCAATAGACATTCCAAATGTATTTGCTCCTGAACTGTTGGAAGTAGCTTAGATTTTTGTTACTCTGAATGCAGGATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAGGTGAAACTTTTGTTGTTCTTTAGCTAAGTGTCGATATGTTTAATGCTTTGCATCTTTATGTTGTATTTAGGTATTCCAAATGAATGATATCAAACTGATACACGTGGTTGTGTGCCATTGCCTTTTTCTCGCTTATTCCCCTTTTTTGCACTCAATTCTTTTTTTTTTCATGTTCATTCCTACATGGTCCTTTGTAATTGGTGTATATCGATATTGTGTTAATTTTTTGTGTATCTTTTCTTGCCCCTGACTTCCTCCTATCCATATTATGGTATTTTTAGCTTTTACATTTAGTCCAAAATAGATAGTTTTTAACATAAGCAAGAAGTTATTAATAGTTCTTTTCCAAATTTTCACTTAGATAAGTGAATTTTTACCTAACCAAGAAATCATGTTAAAGTAAAATTATTTTATCAAGGTGCAATCACTTATCTCAACGAGTAAGTGATTTCTTAAAAGGGTATGTCCAGGCTTAAAATACCATAGATATGGAATGAAGGGGGTATTGCACGTAGGCCTTACCCCTATCTTCGGAAGTACAAAGGTGGTTTTTGATAAGATCCTTGACTCATGGAAAAGCAATTTAAAGTAGATTGAAAAGAAATTACGAAGTGGACAAGCCATGGAAAAATTCTATAGAGAGCATGAGAAAACACTCTGAAAAGGTGTCGTAACTACAACAAAATACTATTATAATTGAAGTACAAGAAACATGTTGTAGCAGAAATAGGAAGACAAGAAACTACAAGAGTAATACTACAACGAACTAGTATGTAAGGAAAAGCAAGATGACACCCAACTATTTATCAACTTTTTTCCCAAATTCGTGTCCTTCATAACCTCCTATCTAAGGCTGTTTTCTCGATAAGTTTAACCTCATCATGCCCTATCTAATCACCTCTACCTTATGCTTCTTCGGACTATTTGTTCCTATCTGAATTTATCCATAGTCAACCTCTCACACCTCCTCGCTGGGGCATATGTTCCTTTCCTCTACACATTTACAGACCATCTCAGTTTTTTTCTTGCATCTTATCCTTCACCGGGGCTACTTCCACCTCACCCAAATATCTTTACTTCTAATACTATCTCTGTGAGTATGCCCACACATCTATCTCAACATACTCATTCCCGCAACTTCCATTTTATGATTGTGGGGGTTCTTAGCTAGCTAACATTCTGGCAATACAACATAGTTGGTCTAAACACCACTATGTATAACTTGCCTTAAGTTTCAATGGCACTTTCTTAGCACACAACACTTCGGAGGCAAGCCTCCACATCCACCCTGCACCTAAACGATGTGTGATGTTGTCATCAGGAACCTTCTTAGATTACACTTTACATCATTTGTCATTATACAGATGTAAAATTTAGTCAACATTAGAGCCAAATTTTTCGTTGTCAATCAGAGCATTATGAGATCTTACAAATTACTATGCCTCGGTCCAATTTATGTGATACCCTCCATTTTTGAGAGTCAATTTGTCGAAACTTGATGCTAGATTGAATTAGATTAGATGTTTAAAACTCTACAAAATTTACTATAAATTGCAAGTTTAACTGAGATTAATATTTTTAAGCATAACTATATATGAAGAACATAAATTGATTCTGGAGGTTCATTTAATGCATTTAATTTTTTTTCCTCAACTTCTTCTAAAACTGAACTTATCACCACGTTTAACTCGCATAAAGTCTTGCACCATGAAATATCACGCATGAAATTAAAACCTAATAAATACACCAAAAAACTATTATTGTCTATAACTACTGAAATTATATGCTCACAAATTCATATAAATGCCAATATTTTCCAGTTTATGGTTTTAACTGAGTTGTAATTATTTGACATAATTCAATTCATTTTAATTTATAGAATGTTGAATGGCTTTTTTCACTCTGTGTTAGATAACATGCTACTTGTCCAATCCAATAACTTTTGTCAGTTTGTCTGTTCGGGTAAGGTGATTAGAAGTCAAAGTTGTTAGTTTGAATATAGTCCATCTTGATTGACATGATGTATGCCCAAAACTGATTGCTTTAGAACGTCTGTTCAGTTTTGGTAGTTTAAACGTTGAGCTATAGTTAGCCATTTTGTAGGTCTCTATGTGCGGTTTACGTAGGTGAAACAGTCATTTCATATCTTTTGTATTATCTTAGAGACTGATAAATAAGAAAACGTCTTGCGGTAAAGGATGAATGGATTATCACATAAAGTTTATTGCTTTACTGTTAAGCCAAAAGACACTTATTGTTGGATGGTCATTCATCGTTGATATTGAGGGAGATGAAGAAGTGCAATTACTTTAAATATGAAAAATAGGAACTTCTATCAAAATGTGCGTTATTCCTCGTTACATGTGTTCATGCAGTGATACATATTATATATGTGACGCTAGTATGTGTATCAATTTGCTCATCATACTAATTTTGTTCCTGAAGGTTTTCTTGACGTCCTCTTTGGTTTCCATTCCTTACATCAGTAGGAGATGTAATGAATTCACACAAGTAGCAACAGATAAGGAAAATTATATTAGGACTCATTATAAGGAAGGAAATTAAGAAAGAACTGGGATAAAATCTGAAGCAACGATGCACCAATCACTACTCTACCAAGTGACTGCATCCTTCAGAACTTACCTATCTTGCAGGAAAAAGGGAAGTTGCAAATTTTGCAAATTCTTTTTCTACATCAATATTTATTTTAGGATAAATTACAGCCCAAACCTTTGGGCCATCTAGTTAATAAAATATGTACAGTTTATAGGTAGTGTCTACTTCGGTTTAGGTTTGGTAAACTAGATGGCCGAAGTTTACATCTTCTCAAGTATCCCTTTATTCTATCCTATTGCCATTCACATAATTATGGGGTGTGAGATTCTAGGTCCCGTTGGAGTTTATTAGGTAGCTGTCTGGTGTTTGGCTGGCTGGGTATTTCCTTGGTTTCGTTGGTGTAGAAGTGGATCGCACATGGGGGTTGCCCAAGACCCATCAATCCTCCCACACTCAATGTGAGACTCAACAGAACCTCCGCACGCCTGGGATTGGTCTTTTAGAATGTGGACAATGTAACTTGGGGGGGGGGGGGCAACATCGGATAAACAAAGAATTGGGATGAACCTTTCTCAGATACCATGATAAAAAAATTTCAACTGCAATATATTGATCAAGAGGTGAGGATTTTCAAAACCATATAAAGAGACCTAATCAACCCTCACACGATGTGGGACTCGACGGTAACATTTGGCAGTTGCTATATCAGAGATTTACTAAGGTTGCAACGCAAAAGTTTTTCCCTATCCTAGGAATATTTTCATGTTAAATACATTACGTGATTTATTTCCATATTTTCTGCATTCAATTCTAGCTTCTGCACCTTCTAATCAAATTGAACAACTAATGGGATATACTCACTATTTTACTAAAAATGGATCAAAGTGAATTTGTTTTGTTCTTCTGCTAAAAGTTTTCTTTATACGGATAAGATTCAACATTTACTGTATGAGAGATTTGTAAGGTTTCAGACTTAAAAGCTTTTCCTACTCTCCAGGCATCTTAGTATGTTTATTATTGTAAGCTATATGGAAGGGGCATTATGCATTTAAGTGGAAAGTCGTCTCCTTGAGTGATGACACTGAAAACGCTGCTATGATGTAGATGTCAGATCTTTTGACTTTTGTTTGTGGTCTCTGTCGATGAATCCTCCCTCCTTTTCTCTCCCCTACTGGTATATTCCCCAAACCCTTGAAAGGCTTCATTGGAAAACATAAGCTAAAGGCTGGTTGAGGATGTTCCCAATGGCAAGGCAATCCTCTGAAAGTGGGGGATTTGGTTTGCATATAAGACTATGTGAGCATAGAAATTGGTTTATTATAAGGTCAATGGATGTTAGTGTAATATAGTTCAATGTAGCTTCTATTGTCATATTTGTTGACATAGTAATGAGATGTACTATACTTTTTCTTAACTCTCTGATTGCTTAGCTTTTATTAAGCAAATGTGTGCAGGCATGTGATGGTAGTTGCTTGCACGAAAGATGCTTCCTTTTTTGTTGTTTGCATATATCTATCCTAAACCTCAGATTTTTTTTTCTCCAAAGAATGGTGGGAAATCTTTGTATGACACCCCCCTCCCCCCTCCCGACGACTATTTGGTTCCAACATTTCCTTGATTGAGTTGCATTTGTCTTTGGTAATGAATGTGGTTGAGTGTCAAATTATGCTGATATGTCAAAGCAAACAAGCTTGAGAAATGTCCTGACTAGGTGGTGCAGCTTGTGGAATATGATTGTTTAGTTTGTTTTATTTTATCAATTTTGTGATATCTTTACTCATGAAATGTCTCATTTTATGGTTGGGAGTCTCGATTTATGTTGTTCTACATTATATTTAGGCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAGGTATCTCTTTAGTCTTTAGTTCTCACGCTTTATCTCTTGATAGGAGCGATATCTTATCTTCTGTGTTCAGTATAATTCTTACTAATTGATGTGTCTTTATTATTTTTTTTTCTATTTAAATTGTTGTTCAGAAAAGTCGTGATGCCTTCCTCACAAAGTCTAATTGTTGCTCTTTGATTTTGTACGCCTTTAAATGTTACAATTACTTTATCCTCCCTCCTCCCTGGAAAATTGAAAGTTAAAGTCCTCTTAAGACTGGTACTGAATCTCTGTGAAAATCTGATTCATTTTTAATCTATCAATATTGTTGCTGATTCACCATTATGTCTGCTGTTGCATTGCAGAGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTT</genome_strand>
        <mrna_strand>GCAAAAGGATTTAGCTAGAACCCTAAACTGATCGAATCGAAGCAACTCAACAATGGAGATGCAAAGCGAATTCGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGAT..........................................................................................................................................................AACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTG.......................................................................................................................................................................................................................ATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCG....................................................................................GATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAG........................................................................................................................................................................................................................................................................................................................................................AGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E719221" ref_strand="+" ref_description="SGN-E719221 [FC07AE12]">
      <seq>aaaggatttagctagaaccctaaactccttaaaaggaaccaactcaacaatggagatgcaaagcgaattcgatcgtctccttttcttcgaacacgctcggaagagtgctgaaaccgcctatgctcagaatcccctagatgctgataacttgacgaggtggggaggtgcattgctggaattatcacagtttcagcccgtagctgaatcgaaacaaatgatttctgatgcaacatcaaagttggaggaggcattgacagtgaaccctgaaaagcatgatgcgctttggtgtttgggaaatgctcatacatcacatgcttttttaactcctgatatggatgaggctaaggtttactttgaaaaagcaactcagtgctttcaacaggcatttgatgcggatccctcaaatgacctttaccgcaaatctctggaagttactgctaaggctccagaattgcacatggaaatccacagacatggtcccatgcaacaacctatggcagcagaaccttcaacatcgacaagcacaaagagttcaaaaaagaagaagagcagtgatctcaagtatgacatttttgggtgggtcatacttgccgttggcattgttgcatgggtgggatttgcaaaatctaatatgcctccaccaccaccaccgcatccacagtgaaacccataatacagcttagctttactggtgaagatactctattagagtttttccttttgcataaacaggaccctaggcattaatgcctgtcatttagctagttactgaaactttataactttctggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="17683" stop="24265"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17983" g_stop="18127" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="145" r_length="145" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18128" i_stop="18281" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18282" g_stop="18360" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="224" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18361" i_stop="18575" i_length="215">
            <donor d_prob="0.785" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18576" g_stop="18745" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="394" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18746" i_stop="18829" i_length="84">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18830" g_stop="18877" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="442" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18878" i_stop="23272" i_length="4395">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="23273" g_stop="23359" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="529" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="23360" i_stop="23703" i_length="344">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="23704" g_stop="23965" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="530" r_stop="791" r_length="262" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E719221" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>791</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E719221" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17983" e_stop="18127"/>
          <exon e_start="18282" e_stop="18360"/>
          <exon e_start="18576" e_stop="18745"/>
          <exon e_start="18830" e_stop="18877"/>
          <exon e_start="23273" e_stop="23359"/>
          <exon e_start="23704" e_stop="23965"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGGATTTAGCTAGAACCCTAAACTGATCGAATCGAAGCAACTCAACAATGGAGATGCAAAGCGAATTCGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGATGTCCGTATCTCCTCTTTCTCTTCATTTATCATTTCTGTTTTATCGTTCTAATTTTCGATTTCAGCTGTTTGATGTGTTTTTGTGTTTAATTTGAACTTCGATGCATTGTTGAATGAATGAGTTTGTTGTTTCTGATATATGATGATGAATGCAGAACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTGGTATTGAGTTGCTTGAATTTTTGGTACTTGATTAAATAGTTTGTTATAAATTAGATTTTTCTAGTATCTGTTAGTTAAACCTATAATGTGTTTCTTCAGCCCAAAAAATGTTCTTCTTTTGTTTGCTGTTTTGGTTTGTTTCTGAAATTCTAAGAGACTGATGAAGTGTGTATTTGTTGTCGTTTACTATATGTTTTGGGGACTTAACTTGGCAGATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCGGTATATTTTTATCAATAGACATTCCAAATGTATTTGCTCCTGAACTGTTGGAAGTAGCTTAGATTTTTGTTACTCTGAATGCAGGATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAGGTGAAACTTTTGTTGTTCTTTAGCTAAGTGTCGATATGTTTAATGCTTTGCATCTTTATGTTGTATTTAGGTATTCCAAATGAATGATATCAAACTGATACACGTGGTTGTGTGCCATTGCCTTTTTCTCGCTTATTCCCCTTTTTTGCACTCAATTCTTTTTTTTTTCATGTTCATTCCTACATGGTCCTTTGTAATTGGTGTATATCGATATTGTGTTAATTTTTTGTGTATCTTTTCTTGCCCCTGACTTCCTCCTATCCATATTATGGTATTTTTAGCTTTTACATTTAGTCCAAAATAGATAGTTTTTAACATAAGCAAGAAGTTATTAATAGTTCTTTTCCAAATTTTCACTTAGATAAGTGAATTTTTACCTAACCAAGAAATCATGTTAAAGTAAAATTATTTTATCAAGGTGCAATCACTTATCTCAACGAGTAAGTGATTTCTTAAAAGGGTATGTCCAGGCTTAAAATACCATAGATATGGAATGAAGGGGGTATTGCACGTAGGCCTTACCCCTATCTTCGGAAGTACAAAGGTGGTTTTTGATAAGATCCTTGACTCATGGAAAAGCAATTTAAAGTAGATTGAAAAGAAATTACGAAGTGGACAAGCCATGGAAAAATTCTATAGAGAGCATGAGAAAACACTCTGAAAAGGTGTCGTAACTACAACAAAATACTATTATAATTGAAGTACAAGAAACATGTTGTAGCAGAAATAGGAAGACAAGAAACTACAAGAGTAATACTACAACGAACTAGTATGTAAGGAAAAGCAAGATGACACCCAACTATTTATCAACTTTTTTCCCAAATTCGTGTCCTTCATAACCTCCTATCTAAGGCTGTTTTCTCGATAAGTTTAACCTCATCATGCCCTATCTAATCACCTCTACCTTATGCTTCTTCGGACTATTTGTTCCTATCTGAATTTATCCATAGTCAACCTCTCACACCTCCTCGCTGGGGCATATGTTCCTTTCCTCTACACATTTACAGACCATCTCAGTTTTTTTCTTGCATCTTATCCTTCACCGGGGCTACTTCCACCTCACCCAAATATCTTTACTTCTAATACTATCTCTGTGAGTATGCCCACACATCTATCTCAACATACTCATTCCCGCAACTTCCATTTTATGATTGTGGGGGTTCTTAGCTAGCTAACATTCTGGCAATACAACATAGTTGGTCTAAACACCACTATGTATAACTTGCCTTAAGTTTCAATGGCACTTTCTTAGCACACAACACTTCGGAGGCAAGCCTCCACATCCACCCTGCACCTAAACGATGTGTGATGTTGTCATCAGGAACCTTCTTAGATTACACTTTACATCATTTGTCATTATACAGATGTAAAATTTAGTCAACATTAGAGCCAAATTTTTCGTTGTCAATCAGAGCATTATGAGATCTTACAAATTACTATGCCTCGGTCCAATTTATGTGATACCCTCCATTTTTGAGAGTCAATTTGTCGAAACTTGATGCTAGATTGAATTAGATTAGATGTTTAAAACTCTACAAAATTTACTATAAATTGCAAGTTTAACTGAGATTAATATTTTTAAGCATAACTATATATGAAGAACATAAATTGATTCTGGAGGTTCATTTAATGCATTTAATTTTTTTTCCTCAACTTCTTCTAAAACTGAACTTATCACCACGTTTAACTCGCATAAAGTCTTGCACCATGAAATATCACGCATGAAATTAAAACCTAATAAATACACCAAAAAACTATTATTGTCTATAACTACTGAAATTATATGCTCACAAATTCATATAAATGCCAATATTTTCCAGTTTATGGTTTTAACTGAGTTGTAATTATTTGACATAATTCAATTCATTTTAATTTATAGAATGTTGAATGGCTTTTTTCACTCTGTGTTAGATAACATGCTACTTGTCCAATCCAATAACTTTTGTCAGTTTGTCTGTTCGGGTAAGGTGATTAGAAGTCAAAGTTGTTAGTTTGAATATAGTCCATCTTGATTGACATGATGTATGCCCAAAACTGATTGCTTTAGAACGTCTGTTCAGTTTTGGTAGTTTAAACGTTGAGCTATAGTTAGCCATTTTGTAGGTCTCTATGTGCGGTTTACGTAGGTGAAACAGTCATTTCATATCTTTTGTATTATCTTAGAGACTGATAAATAAGAAAACGTCTTGCGGTAAAGGATGAATGGATTATCACATAAAGTTTATTGCTTTACTGTTAAGCCAAAAGACACTTATTGTTGGATGGTCATTCATCGTTGATATTGAGGGAGATGAAGAAGTGCAATTACTTTAAATATGAAAAATAGGAACTTCTATCAAAATGTGCGTTATTCCTCGTTACATGTGTTCATGCAGTGATACATATTATATATGTGACGCTAGTATGTGTATCAATTTGCTCATCATACTAATTTTGTTCCTGAAGGTTTTCTTGACGTCCTCTTTGGTTTCCATTCCTTACATCAGTAGGAGATGTAATGAATTCACACAAGTAGCAACAGATAAGGAAAATTATATTAGGACTCATTATAAGGAAGGAAATTAAGAAAGAACTGGGATAAAATCTGAAGCAACGATGCACCAATCACTACTCTACCAAGTGACTGCATCCTTCAGAACTTACCTATCTTGCAGGAAAAAGGGAAGTTGCAAATTTTGCAAATTCTTTTTCTACATCAATATTTATTTTAGGATAAATTACAGCCCAAACCTTTGGGCCATCTAGTTAATAAAATATGTACAGTTTATAGGTAGTGTCTACTTCGGTTTAGGTTTGGTAAACTAGATGGCCGAAGTTTACATCTTCTCAAGTATCCCTTTATTCTATCCTATTGCCATTCACATAATTATGGGGTGTGAGATTCTAGGTCCCGTTGGAGTTTATTAGGTAGCTGTCTGGTGTTTGGCTGGCTGGGTATTTCCTTGGTTTCGTTGGTGTAGAAGTGGATCGCACATGGGGGTTGCCCAAGACCCATCAATCCTCCCACACTCAATGTGAGACTCAACAGAACCTCCGCACGCCTGGGATTGGTCTTTTAGAATGTGGACAATGTAACTTGGGGGGGGGGGGGCAACATCGGATAAACAAAGAATTGGGATGAACCTTTCTCAGATACCATGATAAAAAAATTTCAACTGCAATATATTGATCAAGAGGTGAGGATTTTCAAAACCATATAAAGAGACCTAATCAACCCTCACACGATGTGGGACTCGACGGTAACATTTGGCAGTTGCTATATCAGAGATTTACTAAGGTTGCAACGCAAAAGTTTTTCCCTATCCTAGGAATATTTTCATGTTAAATACATTACGTGATTTATTTCCATATTTTCTGCATTCAATTCTAGCTTCTGCACCTTCTAATCAAATTGAACAACTAATGGGATATACTCACTATTTTACTAAAAATGGATCAAAGTGAATTTGTTTTGTTCTTCTGCTAAAAGTTTTCTTTATACGGATAAGATTCAACATTTACTGTATGAGAGATTTGTAAGGTTTCAGACTTAAAAGCTTTTCCTACTCTCCAGGCATCTTAGTATGTTTATTATTGTAAGCTATATGGAAGGGGCATTATGCATTTAAGTGGAAAGTCGTCTCCTTGAGTGATGACACTGAAAACGCTGCTATGATGTAGATGTCAGATCTTTTGACTTTTGTTTGTGGTCTCTGTCGATGAATCCTCCCTCCTTTTCTCTCCCCTACTGGTATATTCCCCAAACCCTTGAAAGGCTTCATTGGAAAACATAAGCTAAAGGCTGGTTGAGGATGTTCCCAATGGCAAGGCAATCCTCTGAAAGTGGGGGATTTGGTTTGCATATAAGACTATGTGAGCATAGAAATTGGTTTATTATAAGGTCAATGGATGTTAGTGTAATATAGTTCAATGTAGCTTCTATTGTCATATTTGTTGACATAGTAATGAGATGTACTATACTTTTTCTTAACTCTCTGATTGCTTAGCTTTTATTAAGCAAATGTGTGCAGGCATGTGATGGTAGTTGCTTGCACGAAAGATGCTTCCTTTTTTGTTGTTTGCATATATCTATCCTAAACCTCAGATTTTTTTTTCTCCAAAGAATGGTGGGAAATCTTTGTATGACACCCCCCTCCCCCCTCCCGACGACTATTTGGTTCCAACATTTCCTTGATTGAGTTGCATTTGTCTTTGGTAATGAATGTGGTTGAGTGTCAAATTATGCTGATATGTCAAAGCAAACAAGCTTGAGAAATGTCCTGACTAGGTGGTGCAGCTTGTGGAATATGATTGTTTAGTTTGTTTTATTTTATCAATTTTGTGATATCTTTACTCATGAAATGTCTCATTTTATGGTTGGGAGTCTCGATTTATGTTGTTCTACATTATATTTAGGCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAGGTATCTCTTTAGTCTTTAGTTCTCACGCTTTATCTCTTGATAGGAGCGATATCTTATCTTCTGTGTTCAGTATAATTCTTACTAATTGATGTGTCTTTATTATTTTTTTTTCTATTTAAATTGTTGTTCAGAAAAGTCGTGATGCCTTCCTCACAAAGTCTAATTGTTGCTCTTTGATTTTGTACGCCTTTAAATGTTACAATTACTTTATCCTCCCTCCTCCCTGGAAAATTGAAAGTTAAAGTCCTCTTAAGACTGGTACTGAATCTCTGTGAAAATCTGATTCATTTTTAATCTATCAATATTGTTGCTGATTCACCATTATGTCTGCTGTTGCATTGCAGAGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGTTGCATGGGTGGGATTTGCAAAATCTAATATGCCTCCACCACCACCACCGCATCCACAGTGAAACCCATAATACAGCTTAGCTTTACTGGTGAAGATACTCTATTAGAGTTTTTCCTTTTGCATAAACAGGACCCTAGGCATTAATGCCTGTCATTTAGCTAGTTACTGAAACTTTATAACTTTCTGGT</genome_strand>
        <mrna_strand>AAAGGATTTAGCTAGAACCCTAAACTCCTTAAAAGGAACCAACTCAACAATGGAGATGCAAAGCGAATTCGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGAT..........................................................................................................................................................AACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTG.......................................................................................................................................................................................................................ATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCG....................................................................................GATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAG........................................................................................................................................................................................................................................................................................................................................................AGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGTTGCATGGGTGGGATTTGCAAAATCTAATATGCCTCCACCACCACCACCGCATCCACAGTGAAACCCATAATACAGCTTAGCTTTACTGGTGAAGATACTCTATTAGAGTTTTTCCTTTTGCATAAACAGGACCCTAGGCATTAATGCCTGTCATTTAGCTAGTTACTGAAACTTTATAACTTTCTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E241952" ref_strand="+" ref_description="SGN-E241952 [cLED-27-E11]">
      <seq>ttagctagaaccctaaactgatcgaatcgaagcaactcaacaatggagatgcaaagcgaattcgatcgtctccttttcttcgaacacgctcggaagagtgctgaaaccgcctatgctcagaatcccctagatgctgataacttgacgaggtggggaggtgcattgctggaattatcacagtttcagcccgtagctgaatcgaaacaaatgatttctgatgcaacatcaaagttggaggaggcattgacagtgaaccctgaaaagcatgatgcgctttggtgtttgggaaatgctcatacatcacatgcttttttaactcctgatatggatgaggctaaggtttactttgaaaaagcaactcagtgctttcaacaggcatttgatgcggagccgtcaaatgacctttaccgcaaatctctggaagttactgctaaggctccagaattgcacatggaaatccacagacatggtcccatgcaacaacctatggcagcagaaccttcaacatcgacaagcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="17690" stop="23655"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17990" g_stop="18127" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="138" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18128" i_stop="18281" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18282" g_stop="18360" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="217" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18361" i_stop="18575" i_length="215">
            <donor d_prob="0.785" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18576" g_stop="18745" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="387" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18746" i_stop="18829" i_length="84">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18830" g_stop="18877" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="435" r_length="48" r_score="0.958"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18878" i_stop="23272" i_length="4395">
            <donor d_prob="0.996" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="23273" g_stop="23351" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="436" r_stop="514" r_length="79" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E241952" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>514</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E241952" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17990" e_stop="18127"/>
          <exon e_start="18282" e_stop="18360"/>
          <exon e_start="18576" e_stop="18745"/>
          <exon e_start="18830" e_stop="18877"/>
          <exon e_start="23273" e_stop="23351"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGCTAGAACCCTAAACTGATCGAATCGAAGCAACTCAACAATGGAGATGCAAAGCGAATTCGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGATGTCCGTATCTCCTCTTTCTCTTCATTTATCATTTCTGTTTTATCGTTCTAATTTTCGATTTCAGCTGTTTGATGTGTTTTTGTGTTTAATTTGAACTTCGATGCATTGTTGAATGAATGAGTTTGTTGTTTCTGATATATGATGATGAATGCAGAACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTGGTATTGAGTTGCTTGAATTTTTGGTACTTGATTAAATAGTTTGTTATAAATTAGATTTTTCTAGTATCTGTTAGTTAAACCTATAATGTGTTTCTTCAGCCCAAAAAATGTTCTTCTTTTGTTTGCTGTTTTGGTTTGTTTCTGAAATTCTAAGAGACTGATGAAGTGTGTATTTGTTGTCGTTTACTATATGTTTTGGGGACTTAACTTGGCAGATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCGGTATATTTTTATCAATAGACATTCCAAATGTATTTGCTCCTGAACTGTTGGAAGTAGCTTAGATTTTTGTTACTCTGAATGCAGGATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAGGTGAAACTTTTGTTGTTCTTTAGCTAAGTGTCGATATGTTTAATGCTTTGCATCTTTATGTTGTATTTAGGTATTCCAAATGAATGATATCAAACTGATACACGTGGTTGTGTGCCATTGCCTTTTTCTCGCTTATTCCCCTTTTTTGCACTCAATTCTTTTTTTTTTCATGTTCATTCCTACATGGTCCTTTGTAATTGGTGTATATCGATATTGTGTTAATTTTTTGTGTATCTTTTCTTGCCCCTGACTTCCTCCTATCCATATTATGGTATTTTTAGCTTTTACATTTAGTCCAAAATAGATAGTTTTTAACATAAGCAAGAAGTTATTAATAGTTCTTTTCCAAATTTTCACTTAGATAAGTGAATTTTTACCTAACCAAGAAATCATGTTAAAGTAAAATTATTTTATCAAGGTGCAATCACTTATCTCAACGAGTAAGTGATTTCTTAAAAGGGTATGTCCAGGCTTAAAATACCATAGATATGGAATGAAGGGGGTATTGCACGTAGGCCTTACCCCTATCTTCGGAAGTACAAAGGTGGTTTTTGATAAGATCCTTGACTCATGGAAAAGCAATTTAAAGTAGATTGAAAAGAAATTACGAAGTGGACAAGCCATGGAAAAATTCTATAGAGAGCATGAGAAAACACTCTGAAAAGGTGTCGTAACTACAACAAAATACTATTATAATTGAAGTACAAGAAACATGTTGTAGCAGAAATAGGAAGACAAGAAACTACAAGAGTAATACTACAACGAACTAGTATGTAAGGAAAAGCAAGATGACACCCAACTATTTATCAACTTTTTTCCCAAATTCGTGTCCTTCATAACCTCCTATCTAAGGCTGTTTTCTCGATAAGTTTAACCTCATCATGCCCTATCTAATCACCTCTACCTTATGCTTCTTCGGACTATTTGTTCCTATCTGAATTTATCCATAGTCAACCTCTCACACCTCCTCGCTGGGGCATATGTTCCTTTCCTCTACACATTTACAGACCATCTCAGTTTTTTTCTTGCATCTTATCCTTCACCGGGGCTACTTCCACCTCACCCAAATATCTTTACTTCTAATACTATCTCTGTGAGTATGCCCACACATCTATCTCAACATACTCATTCCCGCAACTTCCATTTTATGATTGTGGGGGTTCTTAGCTAGCTAACATTCTGGCAATACAACATAGTTGGTCTAAACACCACTATGTATAACTTGCCTTAAGTTTCAATGGCACTTTCTTAGCACACAACACTTCGGAGGCAAGCCTCCACATCCACCCTGCACCTAAACGATGTGTGATGTTGTCATCAGGAACCTTCTTAGATTACACTTTACATCATTTGTCATTATACAGATGTAAAATTTAGTCAACATTAGAGCCAAATTTTTCGTTGTCAATCAGAGCATTATGAGATCTTACAAATTACTATGCCTCGGTCCAATTTATGTGATACCCTCCATTTTTGAGAGTCAATTTGTCGAAACTTGATGCTAGATTGAATTAGATTAGATGTTTAAAACTCTACAAAATTTACTATAAATTGCAAGTTTAACTGAGATTAATATTTTTAAGCATAACTATATATGAAGAACATAAATTGATTCTGGAGGTTCATTTAATGCATTTAATTTTTTTTCCTCAACTTCTTCTAAAACTGAACTTATCACCACGTTTAACTCGCATAAAGTCTTGCACCATGAAATATCACGCATGAAATTAAAACCTAATAAATACACCAAAAAACTATTATTGTCTATAACTACTGAAATTATATGCTCACAAATTCATATAAATGCCAATATTTTCCAGTTTATGGTTTTAACTGAGTTGTAATTATTTGACATAATTCAATTCATTTTAATTTATAGAATGTTGAATGGCTTTTTTCACTCTGTGTTAGATAACATGCTACTTGTCCAATCCAATAACTTTTGTCAGTTTGTCTGTTCGGGTAAGGTGATTAGAAGTCAAAGTTGTTAGTTTGAATATAGTCCATCTTGATTGACATGATGTATGCCCAAAACTGATTGCTTTAGAACGTCTGTTCAGTTTTGGTAGTTTAAACGTTGAGCTATAGTTAGCCATTTTGTAGGTCTCTATGTGCGGTTTACGTAGGTGAAACAGTCATTTCATATCTTTTGTATTATCTTAGAGACTGATAAATAAGAAAACGTCTTGCGGTAAAGGATGAATGGATTATCACATAAAGTTTATTGCTTTACTGTTAAGCCAAAAGACACTTATTGTTGGATGGTCATTCATCGTTGATATTGAGGGAGATGAAGAAGTGCAATTACTTTAAATATGAAAAATAGGAACTTCTATCAAAATGTGCGTTATTCCTCGTTACATGTGTTCATGCAGTGATACATATTATATATGTGACGCTAGTATGTGTATCAATTTGCTCATCATACTAATTTTGTTCCTGAAGGTTTTCTTGACGTCCTCTTTGGTTTCCATTCCTTACATCAGTAGGAGATGTAATGAATTCACACAAGTAGCAACAGATAAGGAAAATTATATTAGGACTCATTATAAGGAAGGAAATTAAGAAAGAACTGGGATAAAATCTGAAGCAACGATGCACCAATCACTACTCTACCAAGTGACTGCATCCTTCAGAACTTACCTATCTTGCAGGAAAAAGGGAAGTTGCAAATTTTGCAAATTCTTTTTCTACATCAATATTTATTTTAGGATAAATTACAGCCCAAACCTTTGGGCCATCTAGTTAATAAAATATGTACAGTTTATAGGTAGTGTCTACTTCGGTTTAGGTTTGGTAAACTAGATGGCCGAAGTTTACATCTTCTCAAGTATCCCTTTATTCTATCCTATTGCCATTCACATAATTATGGGGTGTGAGATTCTAGGTCCCGTTGGAGTTTATTAGGTAGCTGTCTGGTGTTTGGCTGGCTGGGTATTTCCTTGGTTTCGTTGGTGTAGAAGTGGATCGCACATGGGGGTTGCCCAAGACCCATCAATCCTCCCACACTCAATGTGAGACTCAACAGAACCTCCGCACGCCTGGGATTGGTCTTTTAGAATGTGGACAATGTAACTTGGGGGGGGGGGGGCAACATCGGATAAACAAAGAATTGGGATGAACCTTTCTCAGATACCATGATAAAAAAATTTCAACTGCAATATATTGATCAAGAGGTGAGGATTTTCAAAACCATATAAAGAGACCTAATCAACCCTCACACGATGTGGGACTCGACGGTAACATTTGGCAGTTGCTATATCAGAGATTTACTAAGGTTGCAACGCAAAAGTTTTTCCCTATCCTAGGAATATTTTCATGTTAAATACATTACGTGATTTATTTCCATATTTTCTGCATTCAATTCTAGCTTCTGCACCTTCTAATCAAATTGAACAACTAATGGGATATACTCACTATTTTACTAAAAATGGATCAAAGTGAATTTGTTTTGTTCTTCTGCTAAAAGTTTTCTTTATACGGATAAGATTCAACATTTACTGTATGAGAGATTTGTAAGGTTTCAGACTTAAAAGCTTTTCCTACTCTCCAGGCATCTTAGTATGTTTATTATTGTAAGCTATATGGAAGGGGCATTATGCATTTAAGTGGAAAGTCGTCTCCTTGAGTGATGACACTGAAAACGCTGCTATGATGTAGATGTCAGATCTTTTGACTTTTGTTTGTGGTCTCTGTCGATGAATCCTCCCTCCTTTTCTCTCCCCTACTGGTATATTCCCCAAACCCTTGAAAGGCTTCATTGGAAAACATAAGCTAAAGGCTGGTTGAGGATGTTCCCAATGGCAAGGCAATCCTCTGAAAGTGGGGGATTTGGTTTGCATATAAGACTATGTGAGCATAGAAATTGGTTTATTATAAGGTCAATGGATGTTAGTGTAATATAGTTCAATGTAGCTTCTATTGTCATATTTGTTGACATAGTAATGAGATGTACTATACTTTTTCTTAACTCTCTGATTGCTTAGCTTTTATTAAGCAAATGTGTGCAGGCATGTGATGGTAGTTGCTTGCACGAAAGATGCTTCCTTTTTTGTTGTTTGCATATATCTATCCTAAACCTCAGATTTTTTTTTCTCCAAAGAATGGTGGGAAATCTTTGTATGACACCCCCCTCCCCCCTCCCGACGACTATTTGGTTCCAACATTTCCTTGATTGAGTTGCATTTGTCTTTGGTAATGAATGTGGTTGAGTGTCAAATTATGCTGATATGTCAAAGCAAACAAGCTTGAGAAATGTCCTGACTAGGTGGTGCAGCTTGTGGAATATGATTGTTTAGTTTGTTTTATTTTATCAATTTTGTGATATCTTTACTCATGAAATGTCTCATTTTATGGTTGGGAGTCTCGATTTATGTTGTTCTACATTATATTTAGGCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAA</genome_strand>
        <mrna_strand>TTAGCTAGAACCCTAAACTGATCGAATCGAAGCAACTCAACAATGGAGATGCAAAGCGAATTCGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGAT..........................................................................................................................................................AACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTG.......................................................................................................................................................................................................................ATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCG....................................................................................GAGCCGTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E274239" ref_strand="+" ref_description="SGN-E274239 [cLEN-15-I17]">
      <seq>tcgaatcgaagcaactcaacaatggagatgcaaagcgaattcgatcgtctccttttcttcgaacacgctcggaagagtgctgaaaccgcctatgctcagaatcccctagatgctgataacttgacgaggtggggaggtgcattgctggaattatcacagtttcagcccgtagctgaatcgaaacaaatgatttctgatgcaacatcaaagttggaggaggcattgacagtgaaccctgaaaagcatgatgcgctttggtgtttgggaaatgctcatacatcacatgcttttttaactcctgatatggatgaggctaaggtttactttgaaaaagcaactcagtgctttcaacaggcatttgatgcggatccctcaaatgacctttaccgcaaatctctggaagttactgctaaggctccagaattgcacatggaaatccacagacatggtcccatgcaacaacctatggcagcagaaccttcaacatcgacaagcacaaagagttcaaaaaagaagaagagcagtgatctcaagtatgacatttttgggtgggtcatacttgccgttggcattgttgcatgggtgggatttgcaaaatctaatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="17711" stop="24108"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18011" g_stop="18127" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="117" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18128" i_stop="18281" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18282" g_stop="18360" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="196" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18361" i_stop="18575" i_length="215">
            <donor d_prob="0.785" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18576" g_stop="18745" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="366" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18746" i_stop="18829" i_length="84">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18830" g_stop="18877" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="414" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18878" i_stop="23272" i_length="4395">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="23273" g_stop="23359" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="501" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="23360" i_stop="23703" i_length="344">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="23704" g_stop="23808" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="502" r_stop="606" r_length="105" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E274239" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>606</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E274239" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18011" e_stop="18127"/>
          <exon e_start="18282" e_stop="18360"/>
          <exon e_start="18576" e_stop="18745"/>
          <exon e_start="18830" e_stop="18877"/>
          <exon e_start="23273" e_stop="23359"/>
          <exon e_start="23704" e_stop="23808"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAATCGAAGCAACTCAACAATGGAGATGCAAAGCGAATTCGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGATGTCCGTATCTCCTCTTTCTCTTCATTTATCATTTCTGTTTTATCGTTCTAATTTTCGATTTCAGCTGTTTGATGTGTTTTTGTGTTTAATTTGAACTTCGATGCATTGTTGAATGAATGAGTTTGTTGTTTCTGATATATGATGATGAATGCAGAACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTGGTATTGAGTTGCTTGAATTTTTGGTACTTGATTAAATAGTTTGTTATAAATTAGATTTTTCTAGTATCTGTTAGTTAAACCTATAATGTGTTTCTTCAGCCCAAAAAATGTTCTTCTTTTGTTTGCTGTTTTGGTTTGTTTCTGAAATTCTAAGAGACTGATGAAGTGTGTATTTGTTGTCGTTTACTATATGTTTTGGGGACTTAACTTGGCAGATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCGGTATATTTTTATCAATAGACATTCCAAATGTATTTGCTCCTGAACTGTTGGAAGTAGCTTAGATTTTTGTTACTCTGAATGCAGGATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAGGTGAAACTTTTGTTGTTCTTTAGCTAAGTGTCGATATGTTTAATGCTTTGCATCTTTATGTTGTATTTAGGTATTCCAAATGAATGATATCAAACTGATACACGTGGTTGTGTGCCATTGCCTTTTTCTCGCTTATTCCCCTTTTTTGCACTCAATTCTTTTTTTTTTCATGTTCATTCCTACATGGTCCTTTGTAATTGGTGTATATCGATATTGTGTTAATTTTTTGTGTATCTTTTCTTGCCCCTGACTTCCTCCTATCCATATTATGGTATTTTTAGCTTTTACATTTAGTCCAAAATAGATAGTTTTTAACATAAGCAAGAAGTTATTAATAGTTCTTTTCCAAATTTTCACTTAGATAAGTGAATTTTTACCTAACCAAGAAATCATGTTAAAGTAAAATTATTTTATCAAGGTGCAATCACTTATCTCAACGAGTAAGTGATTTCTTAAAAGGGTATGTCCAGGCTTAAAATACCATAGATATGGAATGAAGGGGGTATTGCACGTAGGCCTTACCCCTATCTTCGGAAGTACAAAGGTGGTTTTTGATAAGATCCTTGACTCATGGAAAAGCAATTTAAAGTAGATTGAAAAGAAATTACGAAGTGGACAAGCCATGGAAAAATTCTATAGAGAGCATGAGAAAACACTCTGAAAAGGTGTCGTAACTACAACAAAATACTATTATAATTGAAGTACAAGAAACATGTTGTAGCAGAAATAGGAAGACAAGAAACTACAAGAGTAATACTACAACGAACTAGTATGTAAGGAAAAGCAAGATGACACCCAACTATTTATCAACTTTTTTCCCAAATTCGTGTCCTTCATAACCTCCTATCTAAGGCTGTTTTCTCGATAAGTTTAACCTCATCATGCCCTATCTAATCACCTCTACCTTATGCTTCTTCGGACTATTTGTTCCTATCTGAATTTATCCATAGTCAACCTCTCACACCTCCTCGCTGGGGCATATGTTCCTTTCCTCTACACATTTACAGACCATCTCAGTTTTTTTCTTGCATCTTATCCTTCACCGGGGCTACTTCCACCTCACCCAAATATCTTTACTTCTAATACTATCTCTGTGAGTATGCCCACACATCTATCTCAACATACTCATTCCCGCAACTTCCATTTTATGATTGTGGGGGTTCTTAGCTAGCTAACATTCTGGCAATACAACATAGTTGGTCTAAACACCACTATGTATAACTTGCCTTAAGTTTCAATGGCACTTTCTTAGCACACAACACTTCGGAGGCAAGCCTCCACATCCACCCTGCACCTAAACGATGTGTGATGTTGTCATCAGGAACCTTCTTAGATTACACTTTACATCATTTGTCATTATACAGATGTAAAATTTAGTCAACATTAGAGCCAAATTTTTCGTTGTCAATCAGAGCATTATGAGATCTTACAAATTACTATGCCTCGGTCCAATTTATGTGATACCCTCCATTTTTGAGAGTCAATTTGTCGAAACTTGATGCTAGATTGAATTAGATTAGATGTTTAAAACTCTACAAAATTTACTATAAATTGCAAGTTTAACTGAGATTAATATTTTTAAGCATAACTATATATGAAGAACATAAATTGATTCTGGAGGTTCATTTAATGCATTTAATTTTTTTTCCTCAACTTCTTCTAAAACTGAACTTATCACCACGTTTAACTCGCATAAAGTCTTGCACCATGAAATATCACGCATGAAATTAAAACCTAATAAATACACCAAAAAACTATTATTGTCTATAACTACTGAAATTATATGCTCACAAATTCATATAAATGCCAATATTTTCCAGTTTATGGTTTTAACTGAGTTGTAATTATTTGACATAATTCAATTCATTTTAATTTATAGAATGTTGAATGGCTTTTTTCACTCTGTGTTAGATAACATGCTACTTGTCCAATCCAATAACTTTTGTCAGTTTGTCTGTTCGGGTAAGGTGATTAGAAGTCAAAGTTGTTAGTTTGAATATAGTCCATCTTGATTGACATGATGTATGCCCAAAACTGATTGCTTTAGAACGTCTGTTCAGTTTTGGTAGTTTAAACGTTGAGCTATAGTTAGCCATTTTGTAGGTCTCTATGTGCGGTTTACGTAGGTGAAACAGTCATTTCATATCTTTTGTATTATCTTAGAGACTGATAAATAAGAAAACGTCTTGCGGTAAAGGATGAATGGATTATCACATAAAGTTTATTGCTTTACTGTTAAGCCAAAAGACACTTATTGTTGGATGGTCATTCATCGTTGATATTGAGGGAGATGAAGAAGTGCAATTACTTTAAATATGAAAAATAGGAACTTCTATCAAAATGTGCGTTATTCCTCGTTACATGTGTTCATGCAGTGATACATATTATATATGTGACGCTAGTATGTGTATCAATTTGCTCATCATACTAATTTTGTTCCTGAAGGTTTTCTTGACGTCCTCTTTGGTTTCCATTCCTTACATCAGTAGGAGATGTAATGAATTCACACAAGTAGCAACAGATAAGGAAAATTATATTAGGACTCATTATAAGGAAGGAAATTAAGAAAGAACTGGGATAAAATCTGAAGCAACGATGCACCAATCACTACTCTACCAAGTGACTGCATCCTTCAGAACTTACCTATCTTGCAGGAAAAAGGGAAGTTGCAAATTTTGCAAATTCTTTTTCTACATCAATATTTATTTTAGGATAAATTACAGCCCAAACCTTTGGGCCATCTAGTTAATAAAATATGTACAGTTTATAGGTAGTGTCTACTTCGGTTTAGGTTTGGTAAACTAGATGGCCGAAGTTTACATCTTCTCAAGTATCCCTTTATTCTATCCTATTGCCATTCACATAATTATGGGGTGTGAGATTCTAGGTCCCGTTGGAGTTTATTAGGTAGCTGTCTGGTGTTTGGCTGGCTGGGTATTTCCTTGGTTTCGTTGGTGTAGAAGTGGATCGCACATGGGGGTTGCCCAAGACCCATCAATCCTCCCACACTCAATGTGAGACTCAACAGAACCTCCGCACGCCTGGGATTGGTCTTTTAGAATGTGGACAATGTAACTTGGGGGGGGGGGGGCAACATCGGATAAACAAAGAATTGGGATGAACCTTTCTCAGATACCATGATAAAAAAATTTCAACTGCAATATATTGATCAAGAGGTGAGGATTTTCAAAACCATATAAAGAGACCTAATCAACCCTCACACGATGTGGGACTCGACGGTAACATTTGGCAGTTGCTATATCAGAGATTTACTAAGGTTGCAACGCAAAAGTTTTTCCCTATCCTAGGAATATTTTCATGTTAAATACATTACGTGATTTATTTCCATATTTTCTGCATTCAATTCTAGCTTCTGCACCTTCTAATCAAATTGAACAACTAATGGGATATACTCACTATTTTACTAAAAATGGATCAAAGTGAATTTGTTTTGTTCTTCTGCTAAAAGTTTTCTTTATACGGATAAGATTCAACATTTACTGTATGAGAGATTTGTAAGGTTTCAGACTTAAAAGCTTTTCCTACTCTCCAGGCATCTTAGTATGTTTATTATTGTAAGCTATATGGAAGGGGCATTATGCATTTAAGTGGAAAGTCGTCTCCTTGAGTGATGACACTGAAAACGCTGCTATGATGTAGATGTCAGATCTTTTGACTTTTGTTTGTGGTCTCTGTCGATGAATCCTCCCTCCTTTTCTCTCCCCTACTGGTATATTCCCCAAACCCTTGAAAGGCTTCATTGGAAAACATAAGCTAAAGGCTGGTTGAGGATGTTCCCAATGGCAAGGCAATCCTCTGAAAGTGGGGGATTTGGTTTGCATATAAGACTATGTGAGCATAGAAATTGGTTTATTATAAGGTCAATGGATGTTAGTGTAATATAGTTCAATGTAGCTTCTATTGTCATATTTGTTGACATAGTAATGAGATGTACTATACTTTTTCTTAACTCTCTGATTGCTTAGCTTTTATTAAGCAAATGTGTGCAGGCATGTGATGGTAGTTGCTTGCACGAAAGATGCTTCCTTTTTTGTTGTTTGCATATATCTATCCTAAACCTCAGATTTTTTTTTCTCCAAAGAATGGTGGGAAATCTTTGTATGACACCCCCCTCCCCCCTCCCGACGACTATTTGGTTCCAACATTTCCTTGATTGAGTTGCATTTGTCTTTGGTAATGAATGTGGTTGAGTGTCAAATTATGCTGATATGTCAAAGCAAACAAGCTTGAGAAATGTCCTGACTAGGTGGTGCAGCTTGTGGAATATGATTGTTTAGTTTGTTTTATTTTATCAATTTTGTGATATCTTTACTCATGAAATGTCTCATTTTATGGTTGGGAGTCTCGATTTATGTTGTTCTACATTATATTTAGGCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAGGTATCTCTTTAGTCTTTAGTTCTCACGCTTTATCTCTTGATAGGAGCGATATCTTATCTTCTGTGTTCAGTATAATTCTTACTAATTGATGTGTCTTTATTATTTTTTTTTCTATTTAAATTGTTGTTCAGAAAAGTCGTGATGCCTTCCTCACAAAGTCTAATTGTTGCTCTTTGATTTTGTACGCCTTTAAATGTTACAATTACTTTATCCTCCCTCCTCCCTGGAAAATTGAAAGTTAAAGTCCTCTTAAGACTGGTACTGAATCTCTGTGAAAATCTGATTCATTTTTAATCTATCAATATTGTTGCTGATTCACCATTATGTCTGCTGTTGCATTGCAGAGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGTTGCATGGGTGGGATTTGCAAAATCTAATATG</genome_strand>
        <mrna_strand>TCGAATCGAAGCAACTCAACAATGGAGATGCAAAGCGAATTCGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGAT..........................................................................................................................................................AACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTG.......................................................................................................................................................................................................................ATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCG....................................................................................GATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAG........................................................................................................................................................................................................................................................................................................................................................AGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGTTGCATGGGTGGGATTTGCAAAATCTAATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E269016" ref_strand="+" ref_description="SGN-E269016 [cLEI-16-O4]">
      <seq>ggaagagtgctgaaaccgcctatgctcagaatcccctacatgctgataactagacgaggtggggaggtgcattgctggaattatcacagtttcagcccgtagctgaatcgaaacaaatgatttctgatgcaacatcaaagttggaggaggcattgacagtgaaccctgaaaagcatgatgcgctttggtgtttgggaaatgctcatacatcacatgcttttttaactcctgatatggatgaggctaaggtttactttgaaaaagcaactcagtgctttcaacaggcatttgatgcggatccctcaaatgacctttaccgcaaatctctggaagttactgctaaggctccagaattgcacatggaaatccacagacatggtcccatgcaacaacctatggcagcagaaccttcaacatcgacaagcacaaagagttcaaaaaagaagaagagcagtgatctcaagtatgacatttttgggtgggtcatacttgccgttggcattgctgcatgggtgggatttgcaaaatctaatatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="17781" stop="24109"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18081" g_stop="18127" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="47" r_length="47" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18128" i_stop="18281" i_length="154">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18282" g_stop="18360" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="48" r_stop="126" r_length="79" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18361" i_stop="18575" i_length="215">
            <donor d_prob="0.785" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18576" g_stop="18745" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="296" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18746" i_stop="18829" i_length="84">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18830" g_stop="18877" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="344" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18878" i_stop="23272" i_length="4395">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="23273" g_stop="23359" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="431" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="23360" i_stop="23703" i_length="344">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="23704" g_stop="23809" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="537" r_length="106" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E269016" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E269016" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18081" e_stop="18127"/>
          <exon e_start="18282" e_stop="18360"/>
          <exon e_start="18576" e_stop="18745"/>
          <exon e_start="18830" e_stop="18877"/>
          <exon e_start="23273" e_stop="23359"/>
          <exon e_start="23704" e_stop="23809"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGATGTCCGTATCTCCTCTTTCTCTTCATTTATCATTTCTGTTTTATCGTTCTAATTTTCGATTTCAGCTGTTTGATGTGTTTTTGTGTTTAATTTGAACTTCGATGCATTGTTGAATGAATGAGTTTGTTGTTTCTGATATATGATGATGAATGCAGAACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTGGTATTGAGTTGCTTGAATTTTTGGTACTTGATTAAATAGTTTGTTATAAATTAGATTTTTCTAGTATCTGTTAGTTAAACCTATAATGTGTTTCTTCAGCCCAAAAAATGTTCTTCTTTTGTTTGCTGTTTTGGTTTGTTTCTGAAATTCTAAGAGACTGATGAAGTGTGTATTTGTTGTCGTTTACTATATGTTTTGGGGACTTAACTTGGCAGATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCGGTATATTTTTATCAATAGACATTCCAAATGTATTTGCTCCTGAACTGTTGGAAGTAGCTTAGATTTTTGTTACTCTGAATGCAGGATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAGGTGAAACTTTTGTTGTTCTTTAGCTAAGTGTCGATATGTTTAATGCTTTGCATCTTTATGTTGTATTTAGGTATTCCAAATGAATGATATCAAACTGATACACGTGGTTGTGTGCCATTGCCTTTTTCTCGCTTATTCCCCTTTTTTGCACTCAATTCTTTTTTTTTTCATGTTCATTCCTACATGGTCCTTTGTAATTGGTGTATATCGATATTGTGTTAATTTTTTGTGTATCTTTTCTTGCCCCTGACTTCCTCCTATCCATATTATGGTATTTTTAGCTTTTACATTTAGTCCAAAATAGATAGTTTTTAACATAAGCAAGAAGTTATTAATAGTTCTTTTCCAAATTTTCACTTAGATAAGTGAATTTTTACCTAACCAAGAAATCATGTTAAAGTAAAATTATTTTATCAAGGTGCAATCACTTATCTCAACGAGTAAGTGATTTCTTAAAAGGGTATGTCCAGGCTTAAAATACCATAGATATGGAATGAAGGGGGTATTGCACGTAGGCCTTACCCCTATCTTCGGAAGTACAAAGGTGGTTTTTGATAAGATCCTTGACTCATGGAAAAGCAATTTAAAGTAGATTGAAAAGAAATTACGAAGTGGACAAGCCATGGAAAAATTCTATAGAGAGCATGAGAAAACACTCTGAAAAGGTGTCGTAACTACAACAAAATACTATTATAATTGAAGTACAAGAAACATGTTGTAGCAGAAATAGGAAGACAAGAAACTACAAGAGTAATACTACAACGAACTAGTATGTAAGGAAAAGCAAGATGACACCCAACTATTTATCAACTTTTTTCCCAAATTCGTGTCCTTCATAACCTCCTATCTAAGGCTGTTTTCTCGATAAGTTTAACCTCATCATGCCCTATCTAATCACCTCTACCTTATGCTTCTTCGGACTATTTGTTCCTATCTGAATTTATCCATAGTCAACCTCTCACACCTCCTCGCTGGGGCATATGTTCCTTTCCTCTACACATTTACAGACCATCTCAGTTTTTTTCTTGCATCTTATCCTTCACCGGGGCTACTTCCACCTCACCCAAATATCTTTACTTCTAATACTATCTCTGTGAGTATGCCCACACATCTATCTCAACATACTCATTCCCGCAACTTCCATTTTATGATTGTGGGGGTTCTTAGCTAGCTAACATTCTGGCAATACAACATAGTTGGTCTAAACACCACTATGTATAACTTGCCTTAAGTTTCAATGGCACTTTCTTAGCACACAACACTTCGGAGGCAAGCCTCCACATCCACCCTGCACCTAAACGATGTGTGATGTTGTCATCAGGAACCTTCTTAGATTACACTTTACATCATTTGTCATTATACAGATGTAAAATTTAGTCAACATTAGAGCCAAATTTTTCGTTGTCAATCAGAGCATTATGAGATCTTACAAATTACTATGCCTCGGTCCAATTTATGTGATACCCTCCATTTTTGAGAGTCAATTTGTCGAAACTTGATGCTAGATTGAATTAGATTAGATGTTTAAAACTCTACAAAATTTACTATAAATTGCAAGTTTAACTGAGATTAATATTTTTAAGCATAACTATATATGAAGAACATAAATTGATTCTGGAGGTTCATTTAATGCATTTAATTTTTTTTCCTCAACTTCTTCTAAAACTGAACTTATCACCACGTTTAACTCGCATAAAGTCTTGCACCATGAAATATCACGCATGAAATTAAAACCTAATAAATACACCAAAAAACTATTATTGTCTATAACTACTGAAATTATATGCTCACAAATTCATATAAATGCCAATATTTTCCAGTTTATGGTTTTAACTGAGTTGTAATTATTTGACATAATTCAATTCATTTTAATTTATAGAATGTTGAATGGCTTTTTTCACTCTGTGTTAGATAACATGCTACTTGTCCAATCCAATAACTTTTGTCAGTTTGTCTGTTCGGGTAAGGTGATTAGAAGTCAAAGTTGTTAGTTTGAATATAGTCCATCTTGATTGACATGATGTATGCCCAAAACTGATTGCTTTAGAACGTCTGTTCAGTTTTGGTAGTTTAAACGTTGAGCTATAGTTAGCCATTTTGTAGGTCTCTATGTGCGGTTTACGTAGGTGAAACAGTCATTTCATATCTTTTGTATTATCTTAGAGACTGATAAATAAGAAAACGTCTTGCGGTAAAGGATGAATGGATTATCACATAAAGTTTATTGCTTTACTGTTAAGCCAAAAGACACTTATTGTTGGATGGTCATTCATCGTTGATATTGAGGGAGATGAAGAAGTGCAATTACTTTAAATATGAAAAATAGGAACTTCTATCAAAATGTGCGTTATTCCTCGTTACATGTGTTCATGCAGTGATACATATTATATATGTGACGCTAGTATGTGTATCAATTTGCTCATCATACTAATTTTGTTCCTGAAGGTTTTCTTGACGTCCTCTTTGGTTTCCATTCCTTACATCAGTAGGAGATGTAATGAATTCACACAAGTAGCAACAGATAAGGAAAATTATATTAGGACTCATTATAAGGAAGGAAATTAAGAAAGAACTGGGATAAAATCTGAAGCAACGATGCACCAATCACTACTCTACCAAGTGACTGCATCCTTCAGAACTTACCTATCTTGCAGGAAAAAGGGAAGTTGCAAATTTTGCAAATTCTTTTTCTACATCAATATTTATTTTAGGATAAATTACAGCCCAAACCTTTGGGCCATCTAGTTAATAAAATATGTACAGTTTATAGGTAGTGTCTACTTCGGTTTAGGTTTGGTAAACTAGATGGCCGAAGTTTACATCTTCTCAAGTATCCCTTTATTCTATCCTATTGCCATTCACATAATTATGGGGTGTGAGATTCTAGGTCCCGTTGGAGTTTATTAGGTAGCTGTCTGGTGTTTGGCTGGCTGGGTATTTCCTTGGTTTCGTTGGTGTAGAAGTGGATCGCACATGGGGGTTGCCCAAGACCCATCAATCCTCCCACACTCAATGTGAGACTCAACAGAACCTCCGCACGCCTGGGATTGGTCTTTTAGAATGTGGACAATGTAACTTGGGGGGGGGGGGGCAACATCGGATAAACAAAGAATTGGGATGAACCTTTCTCAGATACCATGATAAAAAAATTTCAACTGCAATATATTGATCAAGAGGTGAGGATTTTCAAAACCATATAAAGAGACCTAATCAACCCTCACACGATGTGGGACTCGACGGTAACATTTGGCAGTTGCTATATCAGAGATTTACTAAGGTTGCAACGCAAAAGTTTTTCCCTATCCTAGGAATATTTTCATGTTAAATACATTACGTGATTTATTTCCATATTTTCTGCATTCAATTCTAGCTTCTGCACCTTCTAATCAAATTGAACAACTAATGGGATATACTCACTATTTTACTAAAAATGGATCAAAGTGAATTTGTTTTGTTCTTCTGCTAAAAGTTTTCTTTATACGGATAAGATTCAACATTTACTGTATGAGAGATTTGTAAGGTTTCAGACTTAAAAGCTTTTCCTACTCTCCAGGCATCTTAGTATGTTTATTATTGTAAGCTATATGGAAGGGGCATTATGCATTTAAGTGGAAAGTCGTCTCCTTGAGTGATGACACTGAAAACGCTGCTATGATGTAGATGTCAGATCTTTTGACTTTTGTTTGTGGTCTCTGTCGATGAATCCTCCCTCCTTTTCTCTCCCCTACTGGTATATTCCCCAAACCCTTGAAAGGCTTCATTGGAAAACATAAGCTAAAGGCTGGTTGAGGATGTTCCCAATGGCAAGGCAATCCTCTGAAAGTGGGGGATTTGGTTTGCATATAAGACTATGTGAGCATAGAAATTGGTTTATTATAAGGTCAATGGATGTTAGTGTAATATAGTTCAATGTAGCTTCTATTGTCATATTTGTTGACATAGTAATGAGATGTACTATACTTTTTCTTAACTCTCTGATTGCTTAGCTTTTATTAAGCAAATGTGTGCAGGCATGTGATGGTAGTTGCTTGCACGAAAGATGCTTCCTTTTTTGTTGTTTGCATATATCTATCCTAAACCTCAGATTTTTTTTTCTCCAAAGAATGGTGGGAAATCTTTGTATGACACCCCCCTCCCCCCTCCCGACGACTATTTGGTTCCAACATTTCCTTGATTGAGTTGCATTTGTCTTTGGTAATGAATGTGGTTGAGTGTCAAATTATGCTGATATGTCAAAGCAAACAAGCTTGAGAAATGTCCTGACTAGGTGGTGCAGCTTGTGGAATATGATTGTTTAGTTTGTTTTATTTTATCAATTTTGTGATATCTTTACTCATGAAATGTCTCATTTTATGGTTGGGAGTCTCGATTTATGTTGTTCTACATTATATTTAGGCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAGGTATCTCTTTAGTCTTTAGTTCTCACGCTTTATCTCTTGATAGGAGCGATATCTTATCTTCTGTGTTCAGTATAATTCTTACTAATTGATGTGTCTTTATTATTTTTTTTTCTATTTAAATTGTTGTTCAGAAAAGTCGTGATGCCTTCCTCACAAAGTCTAATTGTTGCTCTTTGATTTTGTACGCCTTTAAATGTTACAATTACTTTATCCTCCCTCCTCCCTGGAAAATTGAAAGTTAAAGTCCTCTTAAGACTGGTACTGAATCTCTGTGAAAATCTGATTCATTTTTAATCTATCAATATTGTTGCTGATTCACCATTATGTCTGCTGTTGCATTGCAGAGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGTTGCATGGGTGGGATTTGCAAAATCTAATATGC</genome_strand>
        <mrna_strand>GGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTACATGCTGAT..........................................................................................................................................................AACTAGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTG.......................................................................................................................................................................................................................ATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCG....................................................................................GATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAG........................................................................................................................................................................................................................................................................................................................................................AGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGCTGCATGGGTGGGATTTGCAAAATCTAATATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E251462" ref_strand="+" ref_description="SGN-E251462 [cLEG-9-H7]">
      <seq>gctgaaaccgcctatgctcagaatcccctagatgctgataacttgacgaggtggggaagtgcattgctggaattatcacagtttcagcccgtagctgaatcgaaacaaatgatttctgatgcaacatcaaagttggaggaggcattgacagtgaaccctgaaaagcatgatgcgctttggtgtttgggaaatgctcatacatcacatgcttttttaactcctgatatggatgaggctaaggtttactttgaaaaagcaactcagtgctttcaacaggcatttgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="17789" stop="19043"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18089" g_stop="18127" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18128" i_stop="18281" i_length="154">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18282" g_stop="18360" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="118" r_length="79" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18361" i_stop="18575" i_length="215">
            <donor d_prob="0.785" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18576" g_stop="18743" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="286" r_length="168" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E251462" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>286</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E251462" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18089" e_stop="18127"/>
          <exon e_start="18282" e_stop="18360"/>
          <exon e_start="18576" e_stop="18743"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGATGTCCGTATCTCCTCTTTCTCTTCATTTATCATTTCTGTTTTATCGTTCTAATTTTCGATTTCAGCTGTTTGATGTGTTTTTGTGTTTAATTTGAACTTCGATGCATTGTTGAATGAATGAGTTTGTTGTTTCTGATATATGATGATGAATGCAGAACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTGGTATTGAGTTGCTTGAATTTTTGGTACTTGATTAAATAGTTTGTTATAAATTAGATTTTTCTAGTATCTGTTAGTTAAACCTATAATGTGTTTCTTCAGCCCAAAAAATGTTCTTCTTTTGTTTGCTGTTTTGGTTTGTTTCTGAAATTCTAAGAGACTGATGAAGTGTGTATTTGTTGTCGTTTACTATATGTTTTGGGGACTTAACTTGGCAGATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATG</genome_strand>
        <mrna_strand>GCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGAT..........................................................................................................................................................AACTTGACGAGGTGGGGAAGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTG.......................................................................................................................................................................................................................ATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E357070" ref_strand="+" ref_description="SGN-E357070 [cTOS-22-B9]">
      <seq>atttctgatgcaatttcaaagttggaggaggcattgacagtgaaccctgaaaattagatgcgctttggtgtttgggaaatgctcatacatcacatgcttttttaactcctgatatggatgaggctaaggtttactttgaaaaagcaactcagtgctttcaacaggcatttgatgcggatccctcaaatgacctttaccgcaaatctctggaagttactgctaaggctccagaattgcacatggaaatccacagacatggtcccatgcaacaacctatggcagcagaaccttcaacatcgacaagcacaaagagttcaaaaaagaagaagagcagtgatctcaagtatgacatttttgggtgggtcatacttgccgttggcattgttgcatgggtgggatttgcaaaatctaatatgcctccaccaccaccaccgcatccacagtgaaacccataatacagcttagctttactggtgaagatactctattagagtttttccttttgcataaacaggaccctaggcattaatgcctgtcatttagctagttactgaaactttataactttctggtgaaaactttgaagactttttttctgttgtaatagattaaataagactttttttctgttgtgataaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="18273" stop="24339"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18354" g_stop="18360" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="7" r_length="7" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18361" i_stop="18575" i_length="215">
            <donor d_prob="0.785" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18576" g_stop="18745" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="176" r_length="169" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18746" i_stop="18829" i_length="84">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18830" g_stop="18877" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="224" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18878" i_stop="23272" i_length="4395">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="23273" g_stop="23359" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="311" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="23360" i_stop="23703" i_length="344">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="23704" g_stop="24040" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="648" r_length="337" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E357070" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>649</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E357070" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18354" e_stop="18360"/>
          <exon e_start="18576" e_stop="18745"/>
          <exon e_start="18830" e_stop="18877"/>
          <exon e_start="23273" e_stop="23359"/>
          <exon e_start="23704" e_stop="24040"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCTGGTATTGAGTTGCTTGAATTTTTGGTACTTGATTAAATAGTTTGTTATAAATTAGATTTTTCTAGTATCTGTTAGTTAAACCTATAATGTGTTTCTTCAGCCCAAAAAATGTTCTTCTTTTGTTTGCTGTTTTGGTTTGTTTCTGAAATTCTAAGAGACTGATGAAGTGTGTATTTGTTGTCGTTTACTATATGTTTTGGGGACTTAACTTGGCAGATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCGGTATATTTTTATCAATAGACATTCCAAATGTATTTGCTCCTGAACTGTTGGAAGTAGCTTAGATTTTTGTTACTCTGAATGCAGGATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAGGTGAAACTTTTGTTGTTCTTTAGCTAAGTGTCGATATGTTTAATGCTTTGCATCTTTATGTTGTATTTAGGTATTCCAAATGAATGATATCAAACTGATACACGTGGTTGTGTGCCATTGCCTTTTTCTCGCTTATTCCCCTTTTTTGCACTCAATTCTTTTTTTTTTCATGTTCATTCCTACATGGTCCTTTGTAATTGGTGTATATCGATATTGTGTTAATTTTTTGTGTATCTTTTCTTGCCCCTGACTTCCTCCTATCCATATTATGGTATTTTTAGCTTTTACATTTAGTCCAAAATAGATAGTTTTTAACATAAGCAAGAAGTTATTAATAGTTCTTTTCCAAATTTTCACTTAGATAAGTGAATTTTTACCTAACCAAGAAATCATGTTAAAGTAAAATTATTTTATCAAGGTGCAATCACTTATCTCAACGAGTAAGTGATTTCTTAAAAGGGTATGTCCAGGCTTAAAATACCATAGATATGGAATGAAGGGGGTATTGCACGTAGGCCTTACCCCTATCTTCGGAAGTACAAAGGTGGTTTTTGATAAGATCCTTGACTCATGGAAAAGCAATTTAAAGTAGATTGAAAAGAAATTACGAAGTGGACAAGCCATGGAAAAATTCTATAGAGAGCATGAGAAAACACTCTGAAAAGGTGTCGTAACTACAACAAAATACTATTATAATTGAAGTACAAGAAACATGTTGTAGCAGAAATAGGAAGACAAGAAACTACAAGAGTAATACTACAACGAACTAGTATGTAAGGAAAAGCAAGATGACACCCAACTATTTATCAACTTTTTTCCCAAATTCGTGTCCTTCATAACCTCCTATCTAAGGCTGTTTTCTCGATAAGTTTAACCTCATCATGCCCTATCTAATCACCTCTACCTTATGCTTCTTCGGACTATTTGTTCCTATCTGAATTTATCCATAGTCAACCTCTCACACCTCCTCGCTGGGGCATATGTTCCTTTCCTCTACACATTTACAGACCATCTCAGTTTTTTTCTTGCATCTTATCCTTCACCGGGGCTACTTCCACCTCACCCAAATATCTTTACTTCTAATACTATCTCTGTGAGTATGCCCACACATCTATCTCAACATACTCATTCCCGCAACTTCCATTTTATGATTGTGGGGGTTCTTAGCTAGCTAACATTCTGGCAATACAACATAGTTGGTCTAAACACCACTATGTATAACTTGCCTTAAGTTTCAATGGCACTTTCTTAGCACACAACACTTCGGAGGCAAGCCTCCACATCCACCCTGCACCTAAACGATGTGTGATGTTGTCATCAGGAACCTTCTTAGATTACACTTTACATCATTTGTCATTATACAGATGTAAAATTTAGTCAACATTAGAGCCAAATTTTTCGTTGTCAATCAGAGCATTATGAGATCTTACAAATTACTATGCCTCGGTCCAATTTATGTGATACCCTCCATTTTTGAGAGTCAATTTGTCGAAACTTGATGCTAGATTGAATTAGATTAGATGTTTAAAACTCTACAAAATTTACTATAAATTGCAAGTTTAACTGAGATTAATATTTTTAAGCATAACTATATATGAAGAACATAAATTGATTCTGGAGGTTCATTTAATGCATTTAATTTTTTTTCCTCAACTTCTTCTAAAACTGAACTTATCACCACGTTTAACTCGCATAAAGTCTTGCACCATGAAATATCACGCATGAAATTAAAACCTAATAAATACACCAAAAAACTATTATTGTCTATAACTACTGAAATTATATGCTCACAAATTCATATAAATGCCAATATTTTCCAGTTTATGGTTTTAACTGAGTTGTAATTATTTGACATAATTCAATTCATTTTAATTTATAGAATGTTGAATGGCTTTTTTCACTCTGTGTTAGATAACATGCTACTTGTCCAATCCAATAACTTTTGTCAGTTTGTCTGTTCGGGTAAGGTGATTAGAAGTCAAAGTTGTTAGTTTGAATATAGTCCATCTTGATTGACATGATGTATGCCCAAAACTGATTGCTTTAGAACGTCTGTTCAGTTTTGGTAGTTTAAACGTTGAGCTATAGTTAGCCATTTTGTAGGTCTCTATGTGCGGTTTACGTAGGTGAAACAGTCATTTCATATCTTTTGTATTATCTTAGAGACTGATAAATAAGAAAACGTCTTGCGGTAAAGGATGAATGGATTATCACATAAAGTTTATTGCTTTACTGTTAAGCCAAAAGACACTTATTGTTGGATGGTCATTCATCGTTGATATTGAGGGAGATGAAGAAGTGCAATTACTTTAAATATGAAAAATAGGAACTTCTATCAAAATGTGCGTTATTCCTCGTTACATGTGTTCATGCAGTGATACATATTATATATGTGACGCTAGTATGTGTATCAATTTGCTCATCATACTAATTTTGTTCCTGAAGGTTTTCTTGACGTCCTCTTTGGTTTCCATTCCTTACATCAGTAGGAGATGTAATGAATTCACACAAGTAGCAACAGATAAGGAAAATTATATTAGGACTCATTATAAGGAAGGAAATTAAGAAAGAACTGGGATAAAATCTGAAGCAACGATGCACCAATCACTACTCTACCAAGTGACTGCATCCTTCAGAACTTACCTATCTTGCAGGAAAAAGGGAAGTTGCAAATTTTGCAAATTCTTTTTCTACATCAATATTTATTTTAGGATAAATTACAGCCCAAACCTTTGGGCCATCTAGTTAATAAAATATGTACAGTTTATAGGTAGTGTCTACTTCGGTTTAGGTTTGGTAAACTAGATGGCCGAAGTTTACATCTTCTCAAGTATCCCTTTATTCTATCCTATTGCCATTCACATAATTATGGGGTGTGAGATTCTAGGTCCCGTTGGAGTTTATTAGGTAGCTGTCTGGTGTTTGGCTGGCTGGGTATTTCCTTGGTTTCGTTGGTGTAGAAGTGGATCGCACATGGGGGTTGCCCAAGACCCATCAATCCTCCCACACTCAATGTGAGACTCAACAGAACCTCCGCACGCCTGGGATTGGTCTTTTAGAATGTGGACAATGTAACTTGGGGGGGGGGGGGCAACATCGGATAAACAAAGAATTGGGATGAACCTTTCTCAGATACCATGATAAAAAAATTTCAACTGCAATATATTGATCAAGAGGTGAGGATTTTCAAAACCATATAAAGAGACCTAATCAACCCTCACACGATGTGGGACTCGACGGTAACATTTGGCAGTTGCTATATCAGAGATTTACTAAGGTTGCAACGCAAAAGTTTTTCCCTATCCTAGGAATATTTTCATGTTAAATACATTACGTGATTTATTTCCATATTTTCTGCATTCAATTCTAGCTTCTGCACCTTCTAATCAAATTGAACAACTAATGGGATATACTCACTATTTTACTAAAAATGGATCAAAGTGAATTTGTTTTGTTCTTCTGCTAAAAGTTTTCTTTATACGGATAAGATTCAACATTTACTGTATGAGAGATTTGTAAGGTTTCAGACTTAAAAGCTTTTCCTACTCTCCAGGCATCTTAGTATGTTTATTATTGTAAGCTATATGGAAGGGGCATTATGCATTTAAGTGGAAAGTCGTCTCCTTGAGTGATGACACTGAAAACGCTGCTATGATGTAGATGTCAGATCTTTTGACTTTTGTTTGTGGTCTCTGTCGATGAATCCTCCCTCCTTTTCTCTCCCCTACTGGTATATTCCCCAAACCCTTGAAAGGCTTCATTGGAAAACATAAGCTAAAGGCTGGTTGAGGATGTTCCCAATGGCAAGGCAATCCTCTGAAAGTGGGGGATTTGGTTTGCATATAAGACTATGTGAGCATAGAAATTGGTTTATTATAAGGTCAATGGATGTTAGTGTAATATAGTTCAATGTAGCTTCTATTGTCATATTTGTTGACATAGTAATGAGATGTACTATACTTTTTCTTAACTCTCTGATTGCTTAGCTTTTATTAAGCAAATGTGTGCAGGCATGTGATGGTAGTTGCTTGCACGAAAGATGCTTCCTTTTTTGTTGTTTGCATATATCTATCCTAAACCTCAGATTTTTTTTTCTCCAAAGAATGGTGGGAAATCTTTGTATGACACCCCCCTCCCCCCTCCCGACGACTATTTGGTTCCAACATTTCCTTGATTGAGTTGCATTTGTCTTTGGTAATGAATGTGGTTGAGTGTCAAATTATGCTGATATGTCAAAGCAAACAAGCTTGAGAAATGTCCTGACTAGGTGGTGCAGCTTGTGGAATATGATTGTTTAGTTTGTTTTATTTTATCAATTTTGTGATATCTTTACTCATGAAATGTCTCATTTTATGGTTGGGAGTCTCGATTTATGTTGTTCTACATTATATTTAGGCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAGGTATCTCTTTAGTCTTTAGTTCTCACGCTTTATCTCTTGATAGGAGCGATATCTTATCTTCTGTGTTCAGTATAATTCTTACTAATTGATGTGTCTTTATTATTTTTTTTTCTATTTAAATTGTTGTTCAGAAAAGTCGTGATGCCTTCCTCACAAAGTCTAATTGTTGCTCTTTGATTTTGTACGCCTTTAAATGTTACAATTACTTTATCCTCCCTCCTCCCTGGAAAATTGAAAGTTAAAGTCCTCTTAAGACTGGTACTGAATCTCTGTGAAAATCTGATTCATTTTTAATCTATCAATATTGTTGCTGATTCACCATTATGTCTGCTGTTGCATTGCAGAGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGTTGCATGGGTGGGATTTGCAAAATCTAATATGCCTCCACCACCACCACCGCATCCACAGTGAAACCCATAATACAGCTTAGCTTTACTGGTGAAGATACTCTATTAGAGTTTTTCCTTTTGCATAAACAGGACCCTAGGCATTAATGCCTGTCATTTAGCTAGTTACTGAAACTTTATAACTTTCTGGTGAAAACTTTGAAGACTTTTTTTCTGTTGTAATAGATTAAATAAGACTTTTTTTCTGTTGTGATAGATCAAATAAG</genome_strand>
        <mrna_strand>ATTTCTG.......................................................................................................................................................................................................................ATGCAATTTCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAATTA-GATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCG....................................................................................GATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAG........................................................................................................................................................................................................................................................................................................................................................AGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGTTGCATGGGTGGGATTTGCAAAATCTAATATGCCTCCACCACCACCACCGCATCCACAGTGAAACCCATAATACAGCTTAGCTTTACTGGTGAAGATACTCTATTAGAGTTTTTCCTTTTGCATAAACAGGACCCTAGGCATTAATGCCTGTCATTTAGCTAGTTACTGAAACTTTATAACTTTCTGGTGAAAACTTTGAAGACTTTTTTTCTGTTGTAATAGATTAAATAAGACTTTTTTTCTGTTGTGATAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E373562" ref_strand="+" ref_description="SGN-E373562 [TUS-31-P16](-)">
      <seq>caaagttggaggaggcattgacagtgaaccctgaaaagcatgatgcgctttggtgtttgggaaatgctcatacatcacatgcttttttaactcctgatatggatgaggctaaggtttactttgaaaaagcaactcagtgctttcaacaggcatttgatgcggatccctcaaatgacctttaccgcaaatctctggaagttactgctaaggctccagaattgcacatggaaatccacagacatggtcccatgcaacaacctatggcagcagaaccttcaacatcgacaagcacaaagagttcaaaaaagaagaagagcagtgatctcaagtatgacatttttgggtgggtcatacttgccgttggcattgttgcatgggtgggatttgcaaaatctaatatgcctccaccaccaccaccgcatccacagtgaaacccataatacagcttagctttactggtgaagatactctattagagtttttccttttgcataaacaggaccctaggcattaatgcctgtcatttagctagttactgaaactttataactttctggtgaaaactttgaagactttttttctgttgtaatagattaaataagactttttttctgttgtgatagatcaaataagactttttcttttaatctaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="18285" stop="24357"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18585" g_stop="18745" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="161" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18746" i_stop="18829" i_length="84">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18830" g_stop="18877" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="209" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18878" i_stop="23272" i_length="4395">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23273" g_stop="23359" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="296" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="23360" i_stop="23703" i_length="344">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="23704" g_stop="24057" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="650" r_length="354" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="651" polyA_stop="665"/>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E373562" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>650</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E373562" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18585" e_stop="18745"/>
          <exon e_start="18830" e_stop="18877"/>
          <exon e_start="23273" e_stop="23359"/>
          <exon e_start="23704" e_stop="24057"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCGGTATATTTTTATCAATAGACATTCCAAATGTATTTGCTCCTGAACTGTTGGAAGTAGCTTAGATTTTTGTTACTCTGAATGCAGGATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAGGTGAAACTTTTGTTGTTCTTTAGCTAAGTGTCGATATGTTTAATGCTTTGCATCTTTATGTTGTATTTAGGTATTCCAAATGAATGATATCAAACTGATACACGTGGTTGTGTGCCATTGCCTTTTTCTCGCTTATTCCCCTTTTTTGCACTCAATTCTTTTTTTTTTCATGTTCATTCCTACATGGTCCTTTGTAATTGGTGTATATCGATATTGTGTTAATTTTTTGTGTATCTTTTCTTGCCCCTGACTTCCTCCTATCCATATTATGGTATTTTTAGCTTTTACATTTAGTCCAAAATAGATAGTTTTTAACATAAGCAAGAAGTTATTAATAGTTCTTTTCCAAATTTTCACTTAGATAAGTGAATTTTTACCTAACCAAGAAATCATGTTAAAGTAAAATTATTTTATCAAGGTGCAATCACTTATCTCAACGAGTAAGTGATTTCTTAAAAGGGTATGTCCAGGCTTAAAATACCATAGATATGGAATGAAGGGGGTATTGCACGTAGGCCTTACCCCTATCTTCGGAAGTACAAAGGTGGTTTTTGATAAGATCCTTGACTCATGGAAAAGCAATTTAAAGTAGATTGAAAAGAAATTACGAAGTGGACAAGCCATGGAAAAATTCTATAGAGAGCATGAGAAAACACTCTGAAAAGGTGTCGTAACTACAACAAAATACTATTATAATTGAAGTACAAGAAACATGTTGTAGCAGAAATAGGAAGACAAGAAACTACAAGAGTAATACTACAACGAACTAGTATGTAAGGAAAAGCAAGATGACACCCAACTATTTATCAACTTTTTTCCCAAATTCGTGTCCTTCATAACCTCCTATCTAAGGCTGTTTTCTCGATAAGTTTAACCTCATCATGCCCTATCTAATCACCTCTACCTTATGCTTCTTCGGACTATTTGTTCCTATCTGAATTTATCCATAGTCAACCTCTCACACCTCCTCGCTGGGGCATATGTTCCTTTCCTCTACACATTTACAGACCATCTCAGTTTTTTTCTTGCATCTTATCCTTCACCGGGGCTACTTCCACCTCACCCAAATATCTTTACTTCTAATACTATCTCTGTGAGTATGCCCACACATCTATCTCAACATACTCATTCCCGCAACTTCCATTTTATGATTGTGGGGGTTCTTAGCTAGCTAACATTCTGGCAATACAACATAGTTGGTCTAAACACCACTATGTATAACTTGCCTTAAGTTTCAATGGCACTTTCTTAGCACACAACACTTCGGAGGCAAGCCTCCACATCCACCCTGCACCTAAACGATGTGTGATGTTGTCATCAGGAACCTTCTTAGATTACACTTTACATCATTTGTCATTATACAGATGTAAAATTTAGTCAACATTAGAGCCAAATTTTTCGTTGTCAATCAGAGCATTATGAGATCTTACAAATTACTATGCCTCGGTCCAATTTATGTGATACCCTCCATTTTTGAGAGTCAATTTGTCGAAACTTGATGCTAGATTGAATTAGATTAGATGTTTAAAACTCTACAAAATTTACTATAAATTGCAAGTTTAACTGAGATTAATATTTTTAAGCATAACTATATATGAAGAACATAAATTGATTCTGGAGGTTCATTTAATGCATTTAATTTTTTTTCCTCAACTTCTTCTAAAACTGAACTTATCACCACGTTTAACTCGCATAAAGTCTTGCACCATGAAATATCACGCATGAAATTAAAACCTAATAAATACACCAAAAAACTATTATTGTCTATAACTACTGAAATTATATGCTCACAAATTCATATAAATGCCAATATTTTCCAGTTTATGGTTTTAACTGAGTTGTAATTATTTGACATAATTCAATTCATTTTAATTTATAGAATGTTGAATGGCTTTTTTCACTCTGTGTTAGATAACATGCTACTTGTCCAATCCAATAACTTTTGTCAGTTTGTCTGTTCGGGTAAGGTGATTAGAAGTCAAAGTTGTTAGTTTGAATATAGTCCATCTTGATTGACATGATGTATGCCCAAAACTGATTGCTTTAGAACGTCTGTTCAGTTTTGGTAGTTTAAACGTTGAGCTATAGTTAGCCATTTTGTAGGTCTCTATGTGCGGTTTACGTAGGTGAAACAGTCATTTCATATCTTTTGTATTATCTTAGAGACTGATAAATAAGAAAACGTCTTGCGGTAAAGGATGAATGGATTATCACATAAAGTTTATTGCTTTACTGTTAAGCCAAAAGACACTTATTGTTGGATGGTCATTCATCGTTGATATTGAGGGAGATGAAGAAGTGCAATTACTTTAAATATGAAAAATAGGAACTTCTATCAAAATGTGCGTTATTCCTCGTTACATGTGTTCATGCAGTGATACATATTATATATGTGACGCTAGTATGTGTATCAATTTGCTCATCATACTAATTTTGTTCCTGAAGGTTTTCTTGACGTCCTCTTTGGTTTCCATTCCTTACATCAGTAGGAGATGTAATGAATTCACACAAGTAGCAACAGATAAGGAAAATTATATTAGGACTCATTATAAGGAAGGAAATTAAGAAAGAACTGGGATAAAATCTGAAGCAACGATGCACCAATCACTACTCTACCAAGTGACTGCATCCTTCAGAACTTACCTATCTTGCAGGAAAAAGGGAAGTTGCAAATTTTGCAAATTCTTTTTCTACATCAATATTTATTTTAGGATAAATTACAGCCCAAACCTTTGGGCCATCTAGTTAATAAAATATGTACAGTTTATAGGTAGTGTCTACTTCGGTTTAGGTTTGGTAAACTAGATGGCCGAAGTTTACATCTTCTCAAGTATCCCTTTATTCTATCCTATTGCCATTCACATAATTATGGGGTGTGAGATTCTAGGTCCCGTTGGAGTTTATTAGGTAGCTGTCTGGTGTTTGGCTGGCTGGGTATTTCCTTGGTTTCGTTGGTGTAGAAGTGGATCGCACATGGGGGTTGCCCAAGACCCATCAATCCTCCCACACTCAATGTGAGACTCAACAGAACCTCCGCACGCCTGGGATTGGTCTTTTAGAATGTGGACAATGTAACTTGGGGGGGGGGGGGCAACATCGGATAAACAAAGAATTGGGATGAACCTTTCTCAGATACCATGATAAAAAAATTTCAACTGCAATATATTGATCAAGAGGTGAGGATTTTCAAAACCATATAAAGAGACCTAATCAACCCTCACACGATGTGGGACTCGACGGTAACATTTGGCAGTTGCTATATCAGAGATTTACTAAGGTTGCAACGCAAAAGTTTTTCCCTATCCTAGGAATATTTTCATGTTAAATACATTACGTGATTTATTTCCATATTTTCTGCATTCAATTCTAGCTTCTGCACCTTCTAATCAAATTGAACAACTAATGGGATATACTCACTATTTTACTAAAAATGGATCAAAGTGAATTTGTTTTGTTCTTCTGCTAAAAGTTTTCTTTATACGGATAAGATTCAACATTTACTGTATGAGAGATTTGTAAGGTTTCAGACTTAAAAGCTTTTCCTACTCTCCAGGCATCTTAGTATGTTTATTATTGTAAGCTATATGGAAGGGGCATTATGCATTTAAGTGGAAAGTCGTCTCCTTGAGTGATGACACTGAAAACGCTGCTATGATGTAGATGTCAGATCTTTTGACTTTTGTTTGTGGTCTCTGTCGATGAATCCTCCCTCCTTTTCTCTCCCCTACTGGTATATTCCCCAAACCCTTGAAAGGCTTCATTGGAAAACATAAGCTAAAGGCTGGTTGAGGATGTTCCCAATGGCAAGGCAATCCTCTGAAAGTGGGGGATTTGGTTTGCATATAAGACTATGTGAGCATAGAAATTGGTTTATTATAAGGTCAATGGATGTTAGTGTAATATAGTTCAATGTAGCTTCTATTGTCATATTTGTTGACATAGTAATGAGATGTACTATACTTTTTCTTAACTCTCTGATTGCTTAGCTTTTATTAAGCAAATGTGTGCAGGCATGTGATGGTAGTTGCTTGCACGAAAGATGCTTCCTTTTTTGTTGTTTGCATATATCTATCCTAAACCTCAGATTTTTTTTTCTCCAAAGAATGGTGGGAAATCTTTGTATGACACCCCCCTCCCCCCTCCCGACGACTATTTGGTTCCAACATTTCCTTGATTGAGTTGCATTTGTCTTTGGTAATGAATGTGGTTGAGTGTCAAATTATGCTGATATGTCAAAGCAAACAAGCTTGAGAAATGTCCTGACTAGGTGGTGCAGCTTGTGGAATATGATTGTTTAGTTTGTTTTATTTTATCAATTTTGTGATATCTTTACTCATGAAATGTCTCATTTTATGGTTGGGAGTCTCGATTTATGTTGTTCTACATTATATTTAGGCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAGGTATCTCTTTAGTCTTTAGTTCTCACGCTTTATCTCTTGATAGGAGCGATATCTTATCTTCTGTGTTCAGTATAATTCTTACTAATTGATGTGTCTTTATTATTTTTTTTTCTATTTAAATTGTTGTTCAGAAAAGTCGTGATGCCTTCCTCACAAAGTCTAATTGTTGCTCTTTGATTTTGTACGCCTTTAAATGTTACAATTACTTTATCCTCCCTCCTCCCTGGAAAATTGAAAGTTAAAGTCCTCTTAAGACTGGTACTGAATCTCTGTGAAAATCTGATTCATTTTTAATCTATCAATATTGTTGCTGATTCACCATTATGTCTGCTGTTGCATTGCAGAGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGTTGCATGGGTGGGATTTGCAAAATCTAATATGCCTCCACCACCACCACCGCATCCACAGTGAAACCCATAATACAGCTTAGCTTTACTGGTGAAGATACTCTATTAGAGTTTTTCCTTTTGCATAAACAGGACCCTAGGCATTAATGCCTGTCATTTAGCTAGTTACTGAAACTTTATAACTTTCTGGTGAAAACTTTGAAGACTTTTTTTCTGTTGTAATAGATTAAATAAGACTTTTTTTCTGTTGTGATAGATCAAATAAGACTTTTTCTTTTAATCT</genome_strand>
        <mrna_strand>CAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCG....................................................................................GATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAG........................................................................................................................................................................................................................................................................................................................................................AGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGTTGCATGGGTGGGATTTGCAAAATCTAATATGCCTCCACCACCACCACCGCATCCACAGTGAAACCCATAATACAGCTTAGCTTTACTGGTGAAGATACTCTATTAGAGTTTTTCCTTTTGCATAAACAGGACCCTAGGCATTAATGCCTGTCATTTAGCTAGTTACTGAAACTTTATAACTTTCTGGTGAAAACTTTGAAGACTTTTTTTCTGTTGTAATAGATTAAATAAGACTTTTTTTCTGTTGTGATAGATCAAATAAGACTTTTTCTTTTAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E578102" ref_strand="+" ref_description="SGN-E578102 [LE08EB04]">
      <seq>ttgatgcggatccctcaaatgacctttaccgcaaatctctggaagttactgctaaggctccagaattgcacatggaaatccacagacatggtcccatgcaacaacctatggcagcagaaccttcaacatcgacaagcacaaagagttcaaaaaagaagaagagcagtgatctcaagtatgacatttttgggtgggtcatacttgccgttggcattgttgcatgggtgggatttgcaaaatctaatatgcctccaccaccaccaccgcatccacagtgaaacccataatacagcttagctttactggtgaagatactctattagagtttttccttttgcataaacaggaccctaggcattaatgcctgtcatttagctagttactgaaactttataactttctggtgaaaactttgaagactttttttctgttgtaatagattaaataagactttttttctgttgtgatagatcaaataagactttttcttttaatctcgggataaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="18521" stop="24364"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18738" g_stop="18745" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="8" r_length="8" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18746" i_stop="18829" i_length="84">
            <donor d_prob="0.916" d_score="0.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18830" g_stop="18877" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="56" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18878" i_stop="23272" i_length="4395">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23273" g_stop="23359" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="143" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="23360" i_stop="23703" i_length="344">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="23704" g_stop="24073" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="513" r_length="370" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E578102" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E578102" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18738" e_stop="18745"/>
          <exon e_start="18830" e_stop="18877"/>
          <exon e_start="23273" e_stop="23359"/>
          <exon e_start="23704" e_stop="24073"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATGCGGTATATTTTTATCAATAGACATTCCAAATGTATTTGCTCCTGAACTGTTGGAAGTAGCTTAGATTTTTGTTACTCTGAATGCAGGATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAGGTGAAACTTTTGTTGTTCTTTAGCTAAGTGTCGATATGTTTAATGCTTTGCATCTTTATGTTGTATTTAGGTATTCCAAATGAATGATATCAAACTGATACACGTGGTTGTGTGCCATTGCCTTTTTCTCGCTTATTCCCCTTTTTTGCACTCAATTCTTTTTTTTTTCATGTTCATTCCTACATGGTCCTTTGTAATTGGTGTATATCGATATTGTGTTAATTTTTTGTGTATCTTTTCTTGCCCCTGACTTCCTCCTATCCATATTATGGTATTTTTAGCTTTTACATTTAGTCCAAAATAGATAGTTTTTAACATAAGCAAGAAGTTATTAATAGTTCTTTTCCAAATTTTCACTTAGATAAGTGAATTTTTACCTAACCAAGAAATCATGTTAAAGTAAAATTATTTTATCAAGGTGCAATCACTTATCTCAACGAGTAAGTGATTTCTTAAAAGGGTATGTCCAGGCTTAAAATACCATAGATATGGAATGAAGGGGGTATTGCACGTAGGCCTTACCCCTATCTTCGGAAGTACAAAGGTGGTTTTTGATAAGATCCTTGACTCATGGAAAAGCAATTTAAAGTAGATTGAAAAGAAATTACGAAGTGGACAAGCCATGGAAAAATTCTATAGAGAGCATGAGAAAACACTCTGAAAAGGTGTCGTAACTACAACAAAATACTATTATAATTGAAGTACAAGAAACATGTTGTAGCAGAAATAGGAAGACAAGAAACTACAAGAGTAATACTACAACGAACTAGTATGTAAGGAAAAGCAAGATGACACCCAACTATTTATCAACTTTTTTCCCAAATTCGTGTCCTTCATAACCTCCTATCTAAGGCTGTTTTCTCGATAAGTTTAACCTCATCATGCCCTATCTAATCACCTCTACCTTATGCTTCTTCGGACTATTTGTTCCTATCTGAATTTATCCATAGTCAACCTCTCACACCTCCTCGCTGGGGCATATGTTCCTTTCCTCTACACATTTACAGACCATCTCAGTTTTTTTCTTGCATCTTATCCTTCACCGGGGCTACTTCCACCTCACCCAAATATCTTTACTTCTAATACTATCTCTGTGAGTATGCCCACACATCTATCTCAACATACTCATTCCCGCAACTTCCATTTTATGATTGTGGGGGTTCTTAGCTAGCTAACATTCTGGCAATACAACATAGTTGGTCTAAACACCACTATGTATAACTTGCCTTAAGTTTCAATGGCACTTTCTTAGCACACAACACTTCGGAGGCAAGCCTCCACATCCACCCTGCACCTAAACGATGTGTGATGTTGTCATCAGGAACCTTCTTAGATTACACTTTACATCATTTGTCATTATACAGATGTAAAATTTAGTCAACATTAGAGCCAAATTTTTCGTTGTCAATCAGAGCATTATGAGATCTTACAAATTACTATGCCTCGGTCCAATTTATGTGATACCCTCCATTTTTGAGAGTCAATTTGTCGAAACTTGATGCTAGATTGAATTAGATTAGATGTTTAAAACTCTACAAAATTTACTATAAATTGCAAGTTTAACTGAGATTAATATTTTTAAGCATAACTATATATGAAGAACATAAATTGATTCTGGAGGTTCATTTAATGCATTTAATTTTTTTTCCTCAACTTCTTCTAAAACTGAACTTATCACCACGTTTAACTCGCATAAAGTCTTGCACCATGAAATATCACGCATGAAATTAAAACCTAATAAATACACCAAAAAACTATTATTGTCTATAACTACTGAAATTATATGCTCACAAATTCATATAAATGCCAATATTTTCCAGTTTATGGTTTTAACTGAGTTGTAATTATTTGACATAATTCAATTCATTTTAATTTATAGAATGTTGAATGGCTTTTTTCACTCTGTGTTAGATAACATGCTACTTGTCCAATCCAATAACTTTTGTCAGTTTGTCTGTTCGGGTAAGGTGATTAGAAGTCAAAGTTGTTAGTTTGAATATAGTCCATCTTGATTGACATGATGTATGCCCAAAACTGATTGCTTTAGAACGTCTGTTCAGTTTTGGTAGTTTAAACGTTGAGCTATAGTTAGCCATTTTGTAGGTCTCTATGTGCGGTTTACGTAGGTGAAACAGTCATTTCATATCTTTTGTATTATCTTAGAGACTGATAAATAAGAAAACGTCTTGCGGTAAAGGATGAATGGATTATCACATAAAGTTTATTGCTTTACTGTTAAGCCAAAAGACACTTATTGTTGGATGGTCATTCATCGTTGATATTGAGGGAGATGAAGAAGTGCAATTACTTTAAATATGAAAAATAGGAACTTCTATCAAAATGTGCGTTATTCCTCGTTACATGTGTTCATGCAGTGATACATATTATATATGTGACGCTAGTATGTGTATCAATTTGCTCATCATACTAATTTTGTTCCTGAAGGTTTTCTTGACGTCCTCTTTGGTTTCCATTCCTTACATCAGTAGGAGATGTAATGAATTCACACAAGTAGCAACAGATAAGGAAAATTATATTAGGACTCATTATAAGGAAGGAAATTAAGAAAGAACTGGGATAAAATCTGAAGCAACGATGCACCAATCACTACTCTACCAAGTGACTGCATCCTTCAGAACTTACCTATCTTGCAGGAAAAAGGGAAGTTGCAAATTTTGCAAATTCTTTTTCTACATCAATATTTATTTTAGGATAAATTACAGCCCAAACCTTTGGGCCATCTAGTTAATAAAATATGTACAGTTTATAGGTAGTGTCTACTTCGGTTTAGGTTTGGTAAACTAGATGGCCGAAGTTTACATCTTCTCAAGTATCCCTTTATTCTATCCTATTGCCATTCACATAATTATGGGGTGTGAGATTCTAGGTCCCGTTGGAGTTTATTAGGTAGCTGTCTGGTGTTTGGCTGGCTGGGTATTTCCTTGGTTTCGTTGGTGTAGAAGTGGATCGCACATGGGGGTTGCCCAAGACCCATCAATCCTCCCACACTCAATGTGAGACTCAACAGAACCTCCGCACGCCTGGGATTGGTCTTTTAGAATGTGGACAATGTAACTTGGGGGGGGGGGGGCAACATCGGATAAACAAAGAATTGGGATGAACCTTTCTCAGATACCATGATAAAAAAATTTCAACTGCAATATATTGATCAAGAGGTGAGGATTTTCAAAACCATATAAAGAGACCTAATCAACCCTCACACGATGTGGGACTCGACGGTAACATTTGGCAGTTGCTATATCAGAGATTTACTAAGGTTGCAACGCAAAAGTTTTTCCCTATCCTAGGAATATTTTCATGTTAAATACATTACGTGATTTATTTCCATATTTTCTGCATTCAATTCTAGCTTCTGCACCTTCTAATCAAATTGAACAACTAATGGGATATACTCACTATTTTACTAAAAATGGATCAAAGTGAATTTGTTTTGTTCTTCTGCTAAAAGTTTTCTTTATACGGATAAGATTCAACATTTACTGTATGAGAGATTTGTAAGGTTTCAGACTTAAAAGCTTTTCCTACTCTCCAGGCATCTTAGTATGTTTATTATTGTAAGCTATATGGAAGGGGCATTATGCATTTAAGTGGAAAGTCGTCTCCTTGAGTGATGACACTGAAAACGCTGCTATGATGTAGATGTCAGATCTTTTGACTTTTGTTTGTGGTCTCTGTCGATGAATCCTCCCTCCTTTTCTCTCCCCTACTGGTATATTCCCCAAACCCTTGAAAGGCTTCATTGGAAAACATAAGCTAAAGGCTGGTTGAGGATGTTCCCAATGGCAAGGCAATCCTCTGAAAGTGGGGGATTTGGTTTGCATATAAGACTATGTGAGCATAGAAATTGGTTTATTATAAGGTCAATGGATGTTAGTGTAATATAGTTCAATGTAGCTTCTATTGTCATATTTGTTGACATAGTAATGAGATGTACTATACTTTTTCTTAACTCTCTGATTGCTTAGCTTTTATTAAGCAAATGTGTGCAGGCATGTGATGGTAGTTGCTTGCACGAAAGATGCTTCCTTTTTTGTTGTTTGCATATATCTATCCTAAACCTCAGATTTTTTTTTCTCCAAAGAATGGTGGGAAATCTTTGTATGACACCCCCCTCCCCCCTCCCGACGACTATTTGGTTCCAACATTTCCTTGATTGAGTTGCATTTGTCTTTGGTAATGAATGTGGTTGAGTGTCAAATTATGCTGATATGTCAAAGCAAACAAGCTTGAGAAATGTCCTGACTAGGTGGTGCAGCTTGTGGAATATGATTGTTTAGTTTGTTTTATTTTATCAATTTTGTGATATCTTTACTCATGAAATGTCTCATTTTATGGTTGGGAGTCTCGATTTATGTTGTTCTACATTATATTTAGGCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAGGTATCTCTTTAGTCTTTAGTTCTCACGCTTTATCTCTTGATAGGAGCGATATCTTATCTTCTGTGTTCAGTATAATTCTTACTAATTGATGTGTCTTTATTATTTTTTTTTCTATTTAAATTGTTGTTCAGAAAAGTCGTGATGCCTTCCTCACAAAGTCTAATTGTTGCTCTTTGATTTTGTACGCCTTTAAATGTTACAATTACTTTATCCTCCCTCCTCCCTGGAAAATTGAAAGTTAAAGTCCTCTTAAGACTGGTACTGAATCTCTGTGAAAATCTGATTCATTTTTAATCTATCAATATTGTTGCTGATTCACCATTATGTCTGCTGTTGCATTGCAGAGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGTTGCATGGGTGGGATTTGCAAAATCTAATATGCCTCCACCACCACCACCGCATCCACAGTGAAACCCATAATACAGCTTAGCTTTACTGGTGAAGATACTCTATTAGAGTTTTTCCTTTTGCATAAACAGGACCCTAGGCATTAATGCCTGTCATTTAGCTAGTTACTGAAACTTTATAACTTTCTGGTGAAAACTTTGAAGACTTTTTTTCTGTTGTAATAGATTAAATAAGACTTTTTTTCTGTTGTGATAGATCAAATAAGACTTTTTCTTTTAATCTCGGGATATTTTTCATG</genome_strand>
        <mrna_strand>TTGATGCG....................................................................................GATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAG........................................................................................................................................................................................................................................................................................................................................................AGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGTTGCATGGGTGGGATTTGCAAAATCTAATATGCCTCCACCACCACCACCGCATCCACAGTGAAACCCATAATACAGCTTAGCTTTACTGGTGAAGATACTCTATTAGAGTTTTTCCTTTTGCATAAACAGGACCCTAGGCATTAATGCCTGTCATTTAGCTAGTTACTGAAACTTTATAACTTTCTGGTGAAAACTTTGAAGACTTTTTTTCTGTTGTAATAGATTAAATAAGACTTTTTTTCTGTTGTGATAGATCAAATAAGACTTTTTCTTTTAATCTCGGGATAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E278003" ref_strand="-" ref_description="SGN-E278003 [cLER-4-F23]">
      <seq>tcaacatcgacaagcacaaagagttcaaaaaagaagaagagcagtgatctcaagtatgacatttttgggtgggtcatacttgccgttggcattgttgcatgggtgggatttgcaaaatntaatatgcctccaccaccaccaccgcatccacagtgaaacccataatacagcttagctttactggtgaagatactctattagagtttttccttttgcataaacaggaccctaggcattaatgcctgtcatttagctagttactgaaactttataactttctggtgaaaactttgaagactttttttctgttgtaatagattaaataagactttttttctgttgtgatagatcaaataagactttttcttttaatctcgggatatttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="23039" stop="24370"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23339" g_stop="23359" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="21" r_length="21" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23360" i_stop="23703" i_length="344">
            <donor d_prob="0.978" d_score="0.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23704" g_stop="24070" g_length="367"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="388" r_length="367" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E278003" ref_strand="-">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>388</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E278003" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="23339" e_stop="23359"/>
          <exon e_start="23704" e_stop="24070"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAACATCGACAAGCACAAAGGTATCTCTTTAGTCTTTAGTTCTCACGCTTTATCTCTTGATAGGAGCGATATCTTATCTTCTGTGTTCAGTATAATTCTTACTAATTGATGTGTCTTTATTATTTTTTTTTCTATTTAAATTGTTGTTCAGAAAAGTCGTGATGCCTTCCTCACAAAGTCTAATTGTTGCTCTTTGATTTTGTACGCCTTTAAATGTTACAATTACTTTATCCTCCCTCCTCCCTGGAAAATTGAAAGTTAAAGTCCTCTTAAGACTGGTACTGAATCTCTGTGAAAATCTGATTCATTTTTAATCTATCAATATTGTTGCTGATTCACCATTATGTCTGCTGTTGCATTGCAGAGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGTTGCATGGGTGGGATTTGCAAAATCTAATATGCCTCCACCACCACCACCGCATCCACAGTGAAACCCATAATACAGCTTAGCTTTACTGGTGAAGATACTCTATTAGAGTTTTTCCTTTTGCATAAACAGGACCCTAGGCATTAATGCCTGTCATTTAGCTAGTTACTGAAACTTTATAACTTTCTGGTGAAAACTTTGAAGACTTTTTTTCTGTTGTAATAGATTAAATAAGACTTTTTTTCTGTTGTGATAGATCAAATAAGACTTTTTCTTTTAATCTCGGGATATTTTTC</genome_strand>
        <mrna_strand>TCAACATCGACAAGCACAAAG........................................................................................................................................................................................................................................................................................................................................................AGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGTTGCATGGGTGGGATTTGCAAAATNTAATATGCCTCCACCACCACCACCGCATCCACAGTGAAACCCATAATACAGCTTAGCTTTACTGGTGAAGATACTCTATTAGAGTTTTTCCTTTTGCATAAACAGGACCCTAGGCATTAATGCCTGTCATTTAGCTAGTTACTGAAACTTTATAACTTTCTGGTGAAAACTTTGAAGACTTTTTTTCTGTTGTAATAGATTAAATAAGACTTTTTTTCTGTTGTGATAGATCAAATAAGACTTTTTCTTTTAATCTCGGGATATTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E277343" ref_strand="+" ref_description="SGN-E277343 [cLER-3-G9]">
      <seq>aagtttttcgtttgtttacagtatatgcctcattttagcttcttacttattgggagttatgattgttgaagacttagtcgatgttagccaaaatgctattattatcctcacatctattctatttgtcatcttgattatccctattgtgatccctatctatttgagtttcactcaagagccaagagtagtaccagaagaagaggcacttgtatctcggtcaggtgatcaaggtcctggcagatcagaacactacgatggtcaagaaattatattttagtgaggttgaagaagagaaaccaaagggagtagacttgcttcctgctttagaaaggcagaaaaggatcgcgcagttacaagtgagactagcacaagcagctgcagaaggagctgtgagggtgaaaaggagacgaggtcctcgtaggggagaggactttactttagtccaggctttaataaaatcagatttctggcttaagtttttctcactgcttttcggttctgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="26063" stop="24962"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25763" g_stop="25262" g_length="502"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="503" r_length="503" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E277343" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>502</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E277343" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25763" e_stop="25262"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTTTTTCGTTTGTTTACAGTATATGCCTCATTTTAGCTTCTTACTTATTGGGAGTTATGATTGTTGAAGACTTAGTCGATGTTAGCCAAAATGCTATTATTATCCTCACATCTATTCTATTTGTCATCTTGATTATCCCTATTGTGATCCCTATCTATTTGAGTTTCACTCAAGAGCCAAGAGTAGTACCAGAAGAAGAGGCACTTGTATCTCGGTCAGGTGATCAAGGTCCTGGCAGATCAGAACACTACGATGGTCAAGAAATTATA-TTTAGTGAGGTTGAAGAAGAGAAACCAAAGGGAGTAGACTTGCTTCCTGCTTTAGAAAGGCAGAAAAGGATCGCGCAGTTACAAGTGAGACTAGCACAAGCAGCTGCAGAAGGAGCTGTGAGGGTGAAAAGGAGACGAGGTCCTCGTAGGGGAGAGGACTTTACTTTAGTCCAGGCTTTAATAAAAGCAGATTTCTGGCTTATGTTTTTCTCACTGCTTTTCGGTTCTGGA</genome_strand>
        <mrna_strand>AAGTTTTTCGTTTGTTTACAGTATATGCCTCATTTTAGCTTCTTACTTATTGGGAGTTATGATTGTTGAAGACTTAGTCGATGTTAGCCAAAATGCTATTATTATCCTCACATCTATTCTATTTGTCATCTTGATTATCCCTATTGTGATCCCTATCTATTTGAGTTTCACTCAAGAGCCAAGAGTAGTACCAGAAGAAGAGGCACTTGTATCTCGGTCAGGTGATCAAGGTCCTGGCAGATCAGAACACTACGATGGTCAAGAAATTATATTTTAGTGAGGTTGAAGAAGAGAAACCAAAGGGAGTAGACTTGCTTCCTGCTTTAGAAAGGCAGAAAAGGATCGCGCAGTTACAAGTGAGACTAGCACAAGCAGCTGCAGAAGGAGCTGTGAGGGTGAAAAGGAGACGAGGTCCTCGTAGGGGAGAGGACTTTACTTTAGTCCAGGCTTTAATAAAATCAGATTTCTGGCTTAAGTTTTTCTCACTGCTTTTCGGTTCTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E738464" ref_strand="+" ref_description="SGN-E738464 [LC13DA03]">
      <seq>ctttagcttatacctagctgtgctcatctgatctcttctcatcaaaaaaagagagtaatcaaacgcaacgtatccccacacagcccaacttcattcattgataaaacaagaattttgaagttgaagatataaaaaatctgaagctctcgatctgaatccatgacaatttatttgaaacaaagatttggctatttttttcataacagatggctggtgttcgttgctgcaatgtggattcaaacttgtgcgggacttggatacttattcggcagtatttctccagtaattaaaatctctctgaattacaatcagaaacagattgctcgattgggcgtggctaaagatttgggtgatagtgttggatttttagctgctactttgtgtgaaattttgcctttatgggctgcacttcttgtgggtgctattcagaattttattggatatggttggctttggcttattgtgactcgaagaactgaacctttgtcattatgggctatgtgtattcttatatttataggaacaaatggtgaaacctacttcaacacagcagctttagtctcttgtgtacaaaatttcccgaaaagtcgcggtcctgtggttgggattcttaagggatttgctggcttaggtggtgctatcataactcagatatatgcagtaattcattccccggatcacgcttcacttatatttgtgattgcggttggaccagcaatggtgattatagctctcatgtttataatcaggcctgttggaggccatagacaagtcaggccttctgatggtttaagtttttcgtttgtttacagtatatgcctcattttagcttctttacttatggggagttatgattgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="28185" stop="25398"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27885" g_stop="27388" g_length="498"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="498" r_length="498" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27387" i_stop="26057" i_length="1331">
            <donor d_prob="0.980" d_score="0.98"/>
            <acceptor a_prob="0.662" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26056" g_stop="25698" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="499" r_stop="858" r_length="360" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E738464" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>857</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E738464" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27885" e_stop="27388"/>
          <exon e_start="26056" e_stop="25698"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTAGCTTATACCTAGCTGTGCTCATCTGATCTCTTCTCATCAAAAAAAGAGAGTAATCAAACGCAACGTATCCCCACACAGCCCAACTTCATTCATTGATAAAACAAGAATTTTGAAGTTGAAGATATAAAAAATCTGAAGCTCTCGATCTGAATCCATGACAATTTATTTGAAACAAAGATTTGGCTATTTTTTTCATAACAGATGGCTGGTGTTCGTTGCTGCAATGTGGATTCAAACTTGTGCGGGACTTGGATACTTATTCGGCAGTATTTCTCCAGTAATTAAAATCTCTCTGAATTACAATCAGAAACAGATTGCTCGATTGGGCGTGGCTAAAGATTTGGGTGATAGTGTTGGATTTTTAGCTGCTACTTTGTGTGAAATTTTGCCTTTATGGGCTGCACTTCTTGTGGGTGCTATTCAGAATTTTATTGGATATGGTTGGCTTTGGCTTATTGTGACTCGAAGAACTGAACCTTTGCCATTATGGGCTGTGAGTAAACCACCCTTCTTCATTCATCTTCATTTCAAAAGTTTCTAATCGAAAAATATTTTTCAGAAAATGTTTTATTTAATTTTTTTTTCTTCATAACTTGAAATATAGAAAATGATCTTTCTTTTAGTTGAAGCTTAAAATAAGTTATACAAGTGATTCAATCGACTGTGTTCTTGTCAACTTATAATACATCTCATCTTCATTTTTTTTTCTTTACTTATACTATCAAACACAAAAAATAAATAAGAAACGTATATATTATTAATTCTTTTCTTTTTTTTGCTTATGAATTGAATATAAAAATTTCTAAAAATATTTTTCTTTCGTAGTGAACGCAACTCTATCTTTATGAGTTTTCTTTGAAACGAGGCTCTTGCTGTCCACTCATTTTTGCTATAGTTGGACGTTGAAAAGTTCCCATTTTTTTATATGATATGCATTAAATTAATTGAATTGTCACCAAAAAAATTTTATTTTTACTTTGTCAAACACAAAAACTAATTTTTAAAAAGTTTTTTTGTGGCATTCTTGCCATCTCAAAATGCGTCGAGCTCAAGTGGCTACAAAGTCGAATTTCATGTTTCTGTCTGGGGCATATCCAAAGTTTTAGCTACAAAGTGTATTGAAAAATTCACTAATATTTTATAAATATTTAAGTGGGAACTCAACTTAATTTGAAATTATTATAAGAATTCATAAATTTCAAATTTTGAATTTACTTTTATTCTGCTTTTCTTTTTTTCTAGTCTTGACATTTCTATTTTAAAGAAGAATTTGTAAAAACTAAGTTGGAATACTATATATATATATATACCCCGTAAATCGTAATAGTAAATGTTAGACAAGCATTTGTGCCTTAAAAATAAAGGTAACAAGTGTACTTTCCTATTATCGAATGGAGACACAAGTGCTTCTGTCCAAGTTGATACCTTACATGTTACCAAAGGGCTATTTAAATTGCATCTGTGTCTCCGAATTTTAGGAAAATATGTATGTGTATATATATACATAATACATAAATATCTGGTAGATTATGATTGAAATTTCAGAGACACACTTTAACTAAATTAATGTTTTATTATCCAAAACTTTTTTTTTTTTTTGTAATTTTATACATTTTCCATGCGGCTCAACTGTGCTTGATTGGAATTGAGGCATAGTACCAAAGTTTACACTTGAACTCAGTCCCTATTTTGCTGATTATCATAATGAATTATGTCTTATCCATGACATCAATTGGGCATAACTTATTAGTGTCTACTAGAGTGCAAAATTGTCACAAATTCCTTGTTTTCTCTAACAGCTGAAGTTTAACCATTTCTCTGCAGATGTGTATTCTTATATTTATAGGAACAAATGGTGAAACCTACTTCAACACAGCAGCTTTAGTCTCTTGTGTACAAAATTTCCCGAAAAGTCGCGGTCCTGTGGTTGGGATTCTTAAGGGATTTGCTGGCTTAGGTGGTGCTATCATAACTCAGATATATGCAGTAATTCATTCCCCGGATCACGCTTCACTTATATTTGTGATTGCGGTTGGACCAGCAATGGTGATTATAGCTCTCATGTTTATAATCAGGCCTGTTGGAGGCCATAGACAAGTCAGGCCTTCTGATGGTTTAAGTTTTTCGTTTGTTTACAGTATATGCCTCATTTTAGCTTC-TTACTTATTGGGAGTTATGATTGT</genome_strand>
        <mrna_strand>CTTTAGCTTATACCTAGCTGTGCTCATCTGATCTCTTCTCATCAAAAAAAGAGAGTAATCAAACGCAACGTATCCCCACACAGCCCAACTTCATTCATTGATAAAACAAGAATTTTGAAGTTGAAGATATAAAAAATCTGAAGCTCTCGATCTGAATCCATGACAATTTATTTGAAACAAAGATTTGGCTATTTTTTTCATAACAGATGGCTGGTGTTCGTTGCTGCAATGTGGATTCAAACTTGTGCGGGACTTGGATACTTATTCGGCAGTATTTCTCCAGTAATTAAAATCTCTCTGAATTACAATCAGAAACAGATTGCTCGATTGGGCGTGGCTAAAGATTTGGGTGATAGTGTTGGATTTTTAGCTGCTACTTTGTGTGAAATTTTGCCTTTATGGGCTGCACTTCTTGTGGGTGCTATTCAGAATTTTATTGGATATGGTTGGCTTTGGCTTATTGTGACTCGAAGAACTGAACCTTTGTCATTATGGGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGTATTCTTATATTTATAGGAACAAATGGTGAAACCTACTTCAACACAGCAGCTTTAGTCTCTTGTGTACAAAATTTCCCGAAAAGTCGCGGTCCTGTGGTTGGGATTCTTAAGGGATTTGCTGGCTTAGGTGGTGCTATCATAACTCAGATATATGCAGTAATTCATTCCCCGGATCACGCTTCACTTATATTTGTGATTGCGGTTGGACCAGCAATGGTGATTATAGCTCTCATGTTTATAATCAGGCCTGTTGGAGGCCATAGACAAGTCAGGCCTTCTGATGGTTTAAGTTTTTCGTTTGTTTACAGTATATGCCTCATTTTAGCTTCTTTACTTATGGGGAGTTATGATTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E689229" ref_strand="+" ref_description="SGN-E689229 [t3_tus_80_K13]">
      <seq>attttctttcttttagaattctagtaagttcttttctaacaagaattttagtaagttcttttataacacgttatcagcacgaaattgctacttgcaaaggtactatataaatatttttatttaattcacatattctctcataattttcattatgtcgaatttatccaaacttgagtttgtggcattagatatttctggaaagaattatctttcatgggtactcgatgctgagattcacttggctgctaaaggtcttgatgccactattactcagggaaatgaagcatcgagtcaagataaggcgaaggctatgattttccttcgtcatcatcttgatgagggcctgaagattgaatatctgacagtgaaagatccacttgaattgtggactgatttaaaggggagatatgaccacctaaaggcaacagtgttgccaagagctcgttatgagtggatgcatttacggtttcaagattttaagaccgtaattgaatacaactctgctgtattcaggataacctcccagttgaaattatgtggggagactataaaagatgaggacatgttggaaaagacacttactacttttcatgcctcgaatgtgatattgcagcagcaatatcgtgaaaagggttttcagaaatattctgaactaatctcatgtcttttggtggctgagcaacataatgctcttttaatgaaaaatcatgaagctcgtcccactggagctgctccattaccggaggcaaatgcggtggaagcacgtgatcaatctgaagtaaaaagaaatgatcatcggggatataataatgcacggggacgtggcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="28031" stop="29403"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28339" g_stop="29103" g_length="765"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="828" r_length="764" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E689229" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>765</cumulative_length_of_scored_exons>
        <coverage percentage="0.924" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E689229" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28339" e_stop="29103"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACGTTATCAGCACGAAGTTGCTACTTGCAAAGGTATTATATATAAATATTTTTATTTGATTCACATATTCTCTCATAA-TTTCATTATGTCGAATTTATCCAAACTTGAGTTTGTGGCATTAGATATTTCTGGAAAGAATTATCTTTCATGGGTACTCGATGCTGAGATTCACTTGGCTGCTAAAGGTCTTGATGCCACTATTACTCAGGGAAATGAAGCATCGAGTCAAGATAAGGCGAAAGCTATGATTTTCCTTCGTCATCATCTTGATGAGGGCCTGAAGATTGAATATCTGACGGTGAAAGATCCACTTGAATTGTGGACTGATTTAAAGGGGAGATATGACCACCTAAAGGCAACAGTGTTGCCAAGAGCTCGTTATGAGTGGATGCATTTACGGTTTCAAGATTTTAAGACCGTAATTGAATACAACTCTGCTGTATTCAGGATAACCTCCCAGTTAAAATTATGTGGGGAGACTATAAAAGATGAGGACATGTTGGAAAAGACACTTACTACTTTCCATGCCTCAAATGTGATATTGCAGCAACAATATCATGAAAAGGGTTTTCAGAAATATTCTGAACTAATTTCATGTCTTTTGGTGGCTGAGCAACATAATGCTCTTTTAATGAAAAATCATGAAGCTCGTCCCACTGGAGCTGCTCCATTATCGGAGGCAAATGTAGTGGAAGCACGTGATCAATCTGAAGTAAAAAGAGATGATCATCGGGGCTATAATAATGCACGGGGACGTGACAA</genome_strand>
        <mrna_strand>AACACGTTATCAGCACGAAATTGCTACTTGCAAAGGTA--CTATATAAATATTTTTATTTAATTCACATATTCTCTCATAATTTTCATTATGTCGAATTTATCCAAACTTGAGTTTGTGGCATTAGATATTTCTGGAAAGAATTATCTTTCATGGGTACTCGATGCTGAGATTCACTTGGCTGCTAAAGGTCTTGATGCCACTATTACTCAGGGAAATGAAGCATCGAGTCAAGATAAGGCGAAGGCTATGATTTTCCTTCGTCATCATCTTGATGAGGGCCTGAAGATTGAATATCTGACAGTGAAAGATCCACTTGAATTGTGGACTGATTTAAAGGGGAGATATGACCACCTAAAGGCAACAGTGTTGCCAAGAGCTCGTTATGAGTGGATGCATTTACGGTTTCAAGATTTTAAGACCGTAATTGAATACAACTCTGCTGTATTCAGGATAACCTCCCAGTTGAAATTATGTGGGGAGACTATAAAAGATGAGGACATGTTGGAAAAGACACTTACTACTTTTCATGCCTCGAATGTGATATTGCAGCAGCAATATCGTGAAAAGGGTTTTCAGAAATATTCTGAACTAATCTCATGTCTTTTGGTGGCTGAGCAACATAATGCTCTTTTAATGAAAAATCATGAAGCTCGTCCCACTGGAGCTGCTCCATTACCGGAGGCAAATGCGGTGGAAGCACGTGATCAATCTGAAGTAAAAAGAAATGATCATCGGGGATATAATAATGCACGGGGACGTGGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E325909" ref_strand="+" ref_description="SGN-E325909 [cTOC-12-C10]">
      <seq>ttttctttcttttagaattctagtaagttcttttctaacaagaattttagtaagttcttttataacacgttatcagcacgaaattgctacttgcaaaggtactatataaatatttttatttaattcacatattctctcataattttcattatgtcgaatttatccaaacttgagtttgtggcattagatatttctggaaagaattatctttcatgggtactcgatgctgagattcacttggctgctaaaggtcttgatgccactattactcagggaaatgaagcatcgagtcaagataaggcgaaggctatgattttccttcgtcatcatcttgatgagggcctgaagattgaatatctgacagtgaaagatccacttgaattgtggactgatttaaaggggagatatgaccacctaaaggcaacagtgttgccaagagctcgttatgagtggatgcatttacggtttcaagattttaagaccgtaattgaatacaactctgctgtattcaggataacctcccagttgaaattatgtggggagactataaaagatgaggacatgttggaaaagacacttactacttttcatgcctcgaatgtgatattgcagcagcaatatcgtgaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="28031" stop="29205"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28339" g_stop="28905" g_length="567"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="629" r_length="566" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E325909" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="0.901" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E325909" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28339" e_stop="28905"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACGTTATCAGCACGAAGTTGCTACTTGCAAAGGTATTATATATAAATATTTTTATTTGATTCACATATTCTCTCATAA-TTTCATTATGTCGAATTTATCCAAACTTGAGTTTGTGGCATTAGATATTTCTGGAAAGAATTATCTTTCATGGGTACTCGATGCTGAGATTCACTTGGCTGCTAAAGGTCTTGATGCCACTATTACTCAGGGAAATGAAGCATCGAGTCAAGATAAGGCGAAAGCTATGATTTTCCTTCGTCATCATCTTGATGAGGGCCTGAAGATTGAATATCTGACGGTGAAAGATCCACTTGAATTGTGGACTGATTTAAAGGGGAGATATGACCACCTAAAGGCAACAGTGTTGCCAAGAGCTCGTTATGAGTGGATGCATTTACGGTTTCAAGATTTTAAGACCGTAATTGAATACAACTCTGCTGTATTCAGGATAACCTCCCAGTTAAAATTATGTGGGGAGACTATAAAAGATGAGGACATGTTGGAAAAGACACTTACTACTTTCCATGCCTCAAATGTGATATTGCAGCAACAATATCATGAAAA</genome_strand>
        <mrna_strand>AACACGTTATCAGCACGAAATTGCTACTTGCAAAGGTA--CTATATAAATATTTTTATTTAATTCACATATTCTCTCATAATTTTCATTATGTCGAATTTATCCAAACTTGAGTTTGTGGCATTAGATATTTCTGGAAAGAATTATCTTTCATGGGTACTCGATGCTGAGATTCACTTGGCTGCTAAAGGTCTTGATGCCACTATTACTCAGGGAAATGAAGCATCGAGTCAAGATAAGGCGAAGGCTATGATTTTCCTTCGTCATCATCTTGATGAGGGCCTGAAGATTGAATATCTGACAGTGAAAGATCCACTTGAATTGTGGACTGATTTAAAGGGGAGATATGACCACCTAAAGGCAACAGTGTTGCCAAGAGCTCGTTATGAGTGGATGCATTTACGGTTTCAAGATTTTAAGACCGTAATTGAATACAACTCTGCTGTATTCAGGATAACCTCCCAGTTGAAATTATGTGGGGAGACTATAAAAGATGAGGACATGTTGGAAAAGACACTTACTACTTTTCATGCCTCGAATGTGATATTGCAGCAGCAATATCGTGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E206250" ref_strand="+" ref_description="SGN-E206250 [cLEC-29-L2]">
      <seq>acgaatttgctacttgcatagaaatctccaattgtcagttggattcaagatgagtaatggagatgtatacctttttcatagtgctactacacatacaatattaaaagaaaagaaaagaaatacttttctaatttggttatgaaaatgacatatgtcaacacaatatcaggtagtacaaaattaattgagagctctggaagagcgaccttattacaacctggagagacaatattggacatttgtaatgcattataccgtagtaagtcacaaagaaacttattaagtttcagagtaattcgccaaaatggctatcacgttgagacgactaatgaaggaaaggatgaatgcctttacattactacaattaatgtacagaagaaaattgtgcatgaaaaattacgtgcattttcttctaggttctactatacaagtgtaagtacagttgaatcacatgtcgtagtaaacaaaaggtttactaattttaatgattctattatttggtatgaccggttgggccatcccggatttaatatgatgcacagaatcattgagaattcacgtgggcacacctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="29334" stop="30483"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29638" g_stop="30183" g_length="546"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="572" r_length="551" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E206250" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="0.955" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E206250" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29638" e_stop="30183"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATCCCCAGTTGACAGTTGGATTCAAGATGAGTAATGGAGATGTATGCCTTCTTGATAATGCTACAACGCATACAATATTAAAAGAAAAG---A--AATACTTTTCTAATTTGGTTATGAAAATGGCATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGCATTTTCTTCTGGGTTGTACTATACAAGTATAAGTATAGTTGAATCACATGCCATAGTAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATGACCGGTTGGGCCATCCTGGATTTAATATGATGCGCAAAATCATTGAGAATTCACATGGACACACCTT</genome_strand>
        <mrna_strand>AAATCTCCAATTGTCAGTTGGATTCAAGATGAGTAATGGAGATGTATACCTTTTTCATAGTGCTACTACACATACAATATTAAAAGAAAAGAAAAGAAATACTTTTCTAATTTGGTTATGAAAATGACATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGAGCTCTGGAAGAGCGACCTTATTACAACCTGGAGAGACAATATTGGACATTTGTAATGCATTATACCGTAGTAAGTCACAAAGAAACTTATTAAGTTTCAGAGTAATTCGCCAAAATGGCTATCACGTTGAGACGACTAATGAAGGAAAGGATGAATGCCTTTACATTACTACAATTAATGTACAGAAGAAAATTGTGCATGAAAAATTACGTGCATTTTCTTCTAGGTTCTACTATACAAGTGTAAGTACAGTTGAATCACATGTCGTAGTAAACAAAAGGTTTACTAATTTTAATGATTCTATTATTTGGTATGACCGGTTGGGCCATCCCGGATTTAATATGATGCACAGAATCATTGAGAATTCACGTGGGCACACCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E332350" ref_strand="+" ref_description="SGN-E332350 [cTOD-17-L10]">
      <seq>ttttctaatttggttatgaaaatggcatatgtcaacacaaaattaattgagggctctggaagagcgaccttattactacctggagggacaatattaagcattgataatgcattatattgtagtaagtctcaaagaaacttattaagtttcaaagttattcgccaaaatggctatcatgttgagacggctaatgaaggaaaggttgaatacctttacattactacaattaatgttgagaagaaaattgtgcatgaaaaattacctgcattttcttctgggttgtactatacaagtataagtacagttgaatcacatgccgtagtaaacaaaaggtttactaattttaatgattttatcatttggcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="29435" stop="30416"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29748" g_stop="30116" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="367" r_length="367" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E332350" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>369</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332350" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29748" e_stop="30116"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATGAAAATGGCATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGCATTTTCTTCTGGGTTGTACTATACAAGTATAAGTATAGTTGAATCACATGCCATAGTAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATG</genome_strand>
        <mrna_strand>TTTTCTAATTTGGTTATGAAAATGGCATAT--GTCAACACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGCATTTTCTTCTGGGTTGTACTATACAAGTATAAGTACAGTTGAATCACATGCCGTAGTAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E331947" ref_strand="+" ref_description="SGN-E331947 [cTOD-16-G12]">
      <seq>aaataatgcaacaatatgaagattttgagccaaaatctgttcacgaatgtagacagagaaatgattggccaaaatggaaggatgcaattcaagctgaattggcttcactagaaatacgtgaagtttttggaccgataatccgaacacctgaaggtatcaagccagtggggtacaaatgggtttttgtacggaaaagaaatgagaaagatgaagtcatgagatataaggcccgactcgttgctcaaggtttttctcaaagacctggcattgattatatggagacatattctccagtggtagatgcaatcaccttcagatatctcataaatttggcagttcatgaaaaacttgaaatgcgtctaatggacgttgtcacagcctatctatatggctcattggaccacaacattttcatgaaaattcctgaagcattcaaagttcctgaagcatacaaagattcaagagaaacttgttcaataaaacttcagaaatctctgtatggattgaaacaatcaggaaggatgtggtacaatcgtctgagtgaatatttgttaaagaaagggtacaaaaatgacccgatttgtccctgcatttttattaaacggtcggggtctgaatttgtaataatagctgtgtatgttgatgatttgaacatcattggcactggtaaagagcttttagaagctattgagtgtctgaaaaaagaatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="31202" stop="32514"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31502" g_stop="32215" g_length="714"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="711" r_length="711" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E331947" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331947" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31502" e_stop="32215"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATAATGCAACAAGATGAAGTTTTTGAGCCAAAATCTGTTCACGAATGTAGACAGAGAAATGATTGGCCAAAATGGAAGGATGCAATTCAAGCTGAATTGGCTTCACTAGAAAAACGTGAAGTTTTTGGACCAATAATCCGAACACCTGAAGGTATCAAGCCAGTGGGGTACAAATGGGTTTTTGTACGAAAAAAGAAATGAGAAAGGTGAAGTCATGAGATATAAGGCCCGACTCGTTGCTCAAGGTTTTTCTCAAAGACCTGGCATTGATTATATGGAGACATATTCTCCAGTGGTAGATGCAATCACCTTTAGATATCTCATAAATCTGGCAGTTCATGAAAAACTTGAAATGCGTCTAATGGACGTTGTCACAGCCTATCTATATGGCTCATTGGACCACAACATTTTCATGAAAATTCCTGAAGCATTTAAAGTGCCTGAAACATACAAAGATTCAAGAGAAACTTGTTCAATAAAGCTTCAGAAATCTCTGTATGGACTGAAATAATCAGGAAGGATGTGGTACAATCGTTTGAGTGAATATTTGTTAAAGAAAGGGTACAAAAATGACCCGATTTGTCCCTGCATTTTCAGTAAATGGTTGGGGTCTGAATTTGTAATAATAGCTGTGTATGTTGATGATTTGAACATCATTGGAACTCGTAAAGAGCTTTTAGAAGCTGTTGAGTGTCTGAAAAGACAAAATTTT</genome_strand>
        <mrna_strand>AAATAATGCAACAATATGAAGATTTTGAGCCAAAATCTGTTCACGAATGTAGACAGAGAAATGATTGGCCAAAATGGAAGGATGCAATTCAAGCTGAATTGGCTTCACTAGAAATACGTGAAGTTTTTGGACCGATAATCCGAACACCTGAAGGTATCAAGCCAGTGGGGTACAAATGGGTTTTTGTACG-GAAAAGAAATGAGAAAGATGAAGTCATGAGATATAAGGCCCGACTCGTTGCTCAAGGTTTTTCTCAAAGACCTGGCATTGATTATATGGAGACATATTCTCCAGTGGTAGATGCAATCACCTTCAGATATCTCATAAATTTGGCAGTTCATGAAAAACTTGAAATGCGTCTAATGGACGTTGTCACAGCCTATCTATATGGCTCATTGGACCACAACATTTTCATGAAAATTCCTGAAGCATTCAAAGTTCCTGAAGCATACAAAGATTCAAGAGAAACTTGTTCAATAAAACTTCAGAAATCTCTGTATGGATTGAAACAATCAGGAAGGATGTGGTACAATCGTCTGAGTGAATATTTGTTAAAGAAAGGGTACAAAAATGACCCGATTTGTCCCTGCATTTTTATTAAACGGTCGGGGTCTGAATTTGTAATAATAGCTGTGTATGTTGATGATTTGAACATCATTGGCACTGGTAAAGAGCTTTTAGAAGCTATTGAGTGTCTGAAAA-A-AGAATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E211563" ref_strand="+" ref_description="SGN-E211563 [cLEC-67-I7]">
      <seq>ataactcacatccattgagtactccaatggtggtaagatcgcttgacatcaatacagatccatttcgacctcaagagaatgatgaagagcttcttggtgatgaaactccttatcttagtgcgatcggggcactaatgtaccttgctaacaatactcgaccagatatctgttttgcagtaagtctactggcaagattcagttcctccccaacaaaaagacattggaatggtgttaaacacatacttcgatatcttcgagggaccatggacatgggtttattctattccaatgaatccaaatcagaactgattggttacgcagatgcagggtatttatcagatccgcataaagcccgatcacaaacaggctatttgtttacatgtggagacacggcaatatcttggcgatcaatgaagcaaacgttggtagccacttcttcaaatcatgcagaaataatagccatccatgaagcaagtcgagagtgcgtctggttgagatcaatgacccatcatattcaggaaatgtgtggtttttctttgaaaaagaatataccaaccataatgtacgaagataatgctgcatgtatagctcaattgaaaggaggatacatcaaaggagaccggacaaagcatatctcaccaaagttctttttcacgcatgatcttcaacaaaatgggtgagatagaagtncaacaaattcgttcaagtgataatcttgctgatttattcacaaaggcattgccaacatcancgtttgagaagttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="32006" stop="33370"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32306" g_stop="33070" g_length="765"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="765" r_length="765" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E211563" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>765</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E211563" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32306" e_stop="33070"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAACTCACATCCATTGAGTACTCCAATGGTGGTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCAATCGGGGCACTAATGTACCTTGCTAACAATACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAATTGATTGGTTACGCAGATGCAGGGTATTTATCAGATCAGCATAAAGCTCGATCACAAACAGGCTATTTGTTTACATGTGGAGACACGGCAATATCTTGGCGATCAATGAAGCAAACATTGGTAGCCACTTCTTCAAATCATGCAGAAATAATAGCCATCCATGAAGCAAGTCGAGAGTGCGTCTGGTTGAGATCAATGACCCATCATATTCAGAAAAATGTGTGGTTTTTCTTTGAAAAAGAATATACCAACCACAATGTATGAAGATAATGCTGCATGTATAGCTCAATTGAAAGGAGGATACATCAAAGGAGACCAGACAAAGCATATCTCACCAAAGTTCTTTTTCACGCATGATCTTCAACAAAAT-GGTGAGATAGAAGTTCAACAAATTCGTTCAAGTGATAATCTTGCTGATTTATTCACTAAGGCATTGCCAACATCAACATTTGAGAAGTTG</genome_strand>
        <mrna_strand>ATAACTCACATCCATTGAGTACTCCAATGGTGGTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAATACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATGCAGGGTATTTATCAGATCCGCATAAAGCCCGATCACAAACAGGCTATTTGTTTACATGTGGAGACACGGCAATATCTTGGCGATCAATGAAGCAAACGTTGGTAGCCACTTCTTCAAATCATGCAGAAATAATAGCCATCCATGAAGCAAGTCGAGAGTGCGTCTGGTTGAGATCAATGACCCATCATATTCAG-GAAATGTGTGGTTTTTCTTTGAAAAAGAATATACCAACCATAATGTACGAAGATAATGCTGCATGTATAGCTCAATTGAAAGGAGGATACATCAAAGGAGACCGGACAAAGCATATCTCACCAAAGTTCTTTTTCACGCATGATCTTCAACAAAATGGGTGAGATAGAAGTNCAACAAATTCGTTCAAGTGATAATCTTGCTGATTTATTCACAAAGGCATTGCCAACATCANCGTTTGAGAAGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E201786" ref_strand="+" ref_description="SGN-E201786 [cLEC-11-H5]">
      <seq>tggtggtaagatcgcttgacatcaatacagatccatttcgacctcaagagaatgatgaagagcttcttggtgatgaaactccttatcttagtgcgatcggggcactaatgtaccttgctaacaatactcgaccagatatctgttttgcagtaagtctactggcaagattcagttcctccccaacaaaaagacattggaatggtgttaaacacatacttcgatatcttcgagggaccatggacatgggtttattctattccaatgaatccaaatcagaactgattggttacgcagatgcagggtatttatcagatccgcataaagcccgatcacaaacaggctatttgtttacatgtggagacacggcaatatcttggcgatcaatgaagcaaacgttggtagccacttcttcaaatcatgcagaaataatagccatccatgaagcaagtcgagagtgcgtctggttgagatcaatgacccatcatattcaggaaatgtgtggtttttctttgaaaaagaatataccacccttattgtccgaagataatgctgcatgtatagctcaattgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="32033" stop="33204"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32333" g_stop="32904" g_length="572"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="571" r_length="571" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E201786" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>572</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E201786" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32333" e_stop="32904"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTGGTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCAATCGGGGCACTAATGTACCTTGCTAACAATACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAATTGATTGGTTACGCAGATGCAGGGTATTTATCAGATCAGCATAAAGCTCGATCACAAACAGGCTATTTGTTTACATGTGGAGACACGGCAATATCTTGGCGATCAATGAAGCAAACATTGGTAGCCACTTCTTCAAATCATGCAGAAATAATAGCCATCCATGAAGCAAGTCGAGAGTGCGTCTGGTTGAGATCAATGACCCATCATATTCAGAAAAATGTGTGGTTTTTCTTTGAAAAAGAATATACCAACCACAATGTATGAAGATAATGCTGCATGTATAGCTCAATTGAA</genome_strand>
        <mrna_strand>TGGTGGTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAATACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATGCAGGGTATTTATCAGATCCGCATAAAGCCCGATCACAAACAGGCTATTTGTTTACATGTGGAGACACGGCAATATCTTGGCGATCAATGAAGCAAACGTTGGTAGCCACTTCTTCAAATCATGCAGAAATAATAGCCATCCATGAAGCAAGTCGAGAGTGCGTCTGGTTGAGATCAATGACCCATCATATTCAG-GAAATGTGTGGTTTTTCTTTGAAAAAGAATATACCACCCTTATTGTCCGAAGATAATGCTGCATGTATAGCTCAATTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E200850" ref_strand="+" ref_description="SGN-E200850 [cLEC-5-I1]">
      <seq>tttatcagatccgcataaagcccgatcacaaacaggctatttgtttacatgtggagacacggcaatatcttggcgatcaatgaagcaaacgttggtagccacttcttcaaatcatgcagaaataatagccatccatgaagcaagtcgagagtgcgtctggttgagatcaatgacccatcatattcaggaaatgtgtggtttttctttgaaaaagaatataccaaccacaatgcacgaagataatgctgcatgtatagctcaattgaaaggaggatacatcaaaggagaccggacaaagcatatctcaccaaagttctttttcacgcatgatctttaacaaaatggtgagatagaagttcaacaaattcgttcaagtgataatcttgctgatttattcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="32337" stop="33336"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32637" g_stop="33036" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="399" r_length="399" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E200850" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>400</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E200850" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32637" e_stop="33036"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTATCAGATCAGCATAAAGCTCGATCACAAACAGGCTATTTGTTTACATGTGGAGACACGGCAATATCTTGGCGATCAATGAAGCAAACATTGGTAGCCACTTCTTCAAATCATGCAGAAATAATAGCCATCCATGAAGCAAGTCGAGAGTGCGTCTGGTTGAGATCAATGACCCATCATATTCAGAAAAATGTGTGGTTTTTCTTTGAAAAAGAATATACCAACCACAATGTATGAAGATAATGCTGCATGTATAGCTCAATTGAAAGGAGGATACATCAAAGGAGACCAGACAAAGCATATCTCACCAAAGTTCTTTTTCACGCATGATCTTCAACAAAATGGTGAGATAGAAGTTCAACAAATTCGTTCAAGTGATAATCTTGCTGATTTATTCAC</genome_strand>
        <mrna_strand>TTTATCAGATCCGCATAAAGCCCGATCACAAACAGGCTATTTGTTTACATGTGGAGACACGGCAATATCTTGGCGATCAATGAAGCAAACGTTGGTAGCCACTTCTTCAAATCATGCAGAAATAATAGCCATCCATGAAGCAAGTCGAGAGTGCGTCTGGTTGAGATCAATGACCCATCATATTCAG-GAAATGTGTGGTTTTTCTTTGAAAAAGAATATACCAACCACAATGCACGAAGATAATGCTGCATGTATAGCTCAATTGAAAGGAGGATACATCAAAGGAGACCGGACAAAGCATATCTCACCAAAGTTCTTTTTCACGCATGATCTTTAACAAAATGGTGAGATAGAAGTTCAACAAATTCGTTCAAGTGATAATCTTGCTGATTTATTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E351886" ref_strand="+" ref_description="SGN-E351886 [cTOS-8-D9]">
      <seq>ggaaatgtgtggtttttctttgaaaaagaatataccaaccacaatgtacgaagataatgctgcatgtatagctcaattgaaaggaggatacatcaaaggagaccggacaaagcatatctcaccaaagttctttttcacgcatgatcttcaacaaaatggtgagatagaagttcaacaaattcgttcaagtgataatcttgctgatttattcacaaaggcattgccaacatcaacgtttgagaagttgagatacaagattggaatgcgccgtctccaagatatcaagtaaagttttcatcagggggagtgaaatacgcgttgtactcttttccttaactatgggtttgtcccaagttgggttttcctggtaagggttttaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="32526" stop="33504"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32824" g_stop="33204" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="381" r_length="381" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E351886" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>381</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E351886" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32824" e_stop="33204"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATGTGTGGTTTTTCTTTGAAAAAGAATATACCAACCACAATGTATGAAGATAATGCTGCATGTATAGCTCAATTGAAAGGAGGATACATCAAAGGAGACCAGACAAAGCATATCTCACCAAAGTTCTTTTTCACGCATGATCTTCAACAAAATGGTGAGATAGAAGTTCAACAAATTCGTTCAAGTGATAATCTTGCTGATTTATTCACTAAGGCATTGCCAACATCAACATTTGAGAAGTTGAGATACAAGATTGGAATGCGCCGTCTCCGAGATATCAAGTAAAGTTTTCATCAGGGGGAGCGAAATACGCGTTGTACTCTTTTCCTTAACTATGGTTTTGTCCCAAGTTGGGTTTTCCTGGTAAGGTTTTTAAT</genome_strand>
        <mrna_strand>GGAAATGTGTGGTTTTTCTTTGAAAAAGAATATACCAACCACAATGTACGAAGATAATGCTGCATGTATAGCTCAATTGAAAGGAGGATACATCAAAGGAGACCGGACAAAGCATATCTCACCAAAGTTCTTTTTCACGCATGATCTTCAACAAAATGGTGAGATAGAAGTTCAACAAATTCGTTCAAGTGATAATCTTGCTGATTTATTCACAAAGGCATTGCCAACATCAACGTTTGAGAAGTTGAGATACAAGATTGGAATGCGCCGTCTCCAAGATATCAAGTAAAGTTTTCATCAGGGGGAGTGAAATACGCGTTGTACTCTTTTCCTTAACTATGGGTTTGTCCCAAGTTGGGTTTTCCTGGTAAGGGTTTTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E345424" ref_strand="+" ref_description="SGN-E345424 [cTOF-13-H3]">
      <seq>atcagctcagacaataagagcgcgcggcgcagtcataaaaagggctctttcaatagccagtagcgtactgttggacttgagttgacacacgcaaatcagagtgagaagtagagcgaccgattttccgatttgctaatggatcccgacgccgtagcgaaggcatttgtggactactactacaccaccttcgataccaatcgggctggacttgctagcgtctaccaggaaagctctgtactgtcttttgagggtcagaagtatcaggggactcaaagtatctccggtaagctcaccggtctacctttccagcagtgcaagcaccagatcaacaccgttgattgtcagccctctggtgctgccgggggaatgcttgtctttgtcagcggcaatctcagccttccaggcgaacaacacaccctcaagttcagtcagatgtttcacttgattccaacacaaggaggaagtttctacgtgcagaatgacatatttcgcttgaactatgcttgaagggttctgcgttcaattatctcctggtcatattttcttgattgattcgacanagatagtattatagcaagatattgctttcatttcacagtcattgagagactattttttcctgtaatggtttagtgaattgattgatgaacttggcttccntcagagtttaatggaattgacgaggcttttagaagattgttatcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="39772" stop="43048"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40072" g_stop="40503" g_length="432"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="432" r_length="432" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40504" i_stop="42469" i_length="1966">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42470" g_stop="42752" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="433" r_stop="714" r_length="282" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E345424" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E345424" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40072" e_stop="40503"/>
          <exon e_start="42470" e_stop="42752"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCAGCTCAGACAATAAGAGCGCGCGGCGCAGTCATAAAAAGGGCTCTTTCAATAGCCAGTAGCGTACTGTTGGACTTGAGTTGACACACGCAAATCAGAGTGAGAAGTAGAGCGACCGATTTTCCGATTTGCTAATGGATCCCGACGCCGTAGCGAAGGCATTTGTGGACTACTACTACACCACCTTCGATACCAATCGGGCTGGACTTGCTAGCGTCTACCAGGAAAGCTCTGTACTGTCTTTTGAGGGTCAGAAGTATCAGGGGACTCAAAGTATCTCCGGTAAGCTCACCGGTCTACCTTTCCAGCAGTGCAAGCACCAGATCAACACCGTTGATTGTCAGCCCTCTGGTGCTGCCGGGGGAATGCTTGTCTTTGTCAGCGGCAATCTCAGCCTTCCAGGCGAACAACACACCCTCAAGTTCAGTCAGGTACTTCTTCTAGTACTACTACTACTCCATTTGATTATTTTCAGGACTGCTTTCCCATTGTTACATTGACGAGCCATGTGGTTAGGGTTAAATCGCTTGTCTGTATCAGATGCTGTTAGGGTTTAATTTTGCGTGTTTTAGTTTGTGTTTGATCCATTCATTAGTTGATTATTCATTGCGGCTTTCTTATTGAATCTTAAATGGCTTACTTAATCAAAGGGAATAAGACGACTTGATTTTCATTTCTGAATATTAGTGCATTGGAGTACCGTCCTTATACATGAATGTAATTATCACTGCAATAGACTTGTAGTACTTTATGGAGTGTATACCACTAGTTCACTGTTTAACCATTTGTGGATTGCTTAATTGGTTGTCCTTGTGGTAGGGAAATGGGACTACATGAGATTCTCAAATTTGAATAAGGCAGGTGGAGTTTTGTTTTTCAGTTGCTATTATTTGAAGGGACAAACTAGATTCTATGGTCTTAAGAATCAATGGTTTAATGTAAGATTGTGACACAAACTACCCGCTAGTGTGGCCTTGATCATATCACTATTCTAGTATGATAGCTGAATTACATGGTGAAGAGAACTCTGCAGTTTCTTAAGAAGCCATTAAGGAATCCGTGTGTACTGTGATATCATACGATAGTCCATTATTTTCCCTCGATCAGTTGTTTGTTTTATTCATTTAACTTTGTATTGTATGAAGACGAGTTCTCTTGGATTAAGTGTGGTAGCCTTACTCATATTTTTTAAGTTTAGGCCATTTCGTTTTAACTTGAAAATGTTGTTTACTTGTGTACCACTAGATTCTGACTGTTCTAACAAGATTCCTTATGGATATGCAAATACATTTGAATTCTACTGTCTTAGAGTTCAACCTATGTACATGTGCTTTAAGTGCTCCTTCTTCATGGTCTTTTTCTTGATGCGACTTTTTTCAATAGTTCAAGGAAAAGTTCCTAAACATAAAAAATAATGTGTTGCTTGTTTCTATAATTATTTGATTGGATTGACTGGCCCAACTTTGCAATTATTCGATAGAATTCACTTTGTGTGTGTTTAAGTGCTCTTTCCTCCTTGTCTTTATCGATGATATCACTTCTTTCAACAACGTGAACAGAAAAACGTGTGTTCAAAAAGTAAAATGAATGGTGTGGCTCTATTATTATTTGATTTGGCAGAAAATGGAAATTGAATACTCTTATATTGCTCTATAAATTCATCAGATAAACTTAGCAAAAATGTAAATCTCTTGGCTCTCCACATTGTGAACACCCTTATATTGCTCCAGCCTCATCGAACAATAGAATGCATTAATGAACAGTTTAATTGGGAAGGTTGTTATACTAGACTGAAGAAGGGTCAGAGAAAGTCTTATAATGGTAGAGTATCGTGCTTTGACTAATTTTGATGTTTTTCTTTTGGACTACACATCTAATGTTTGATCATTTGGTCTTGTGTTGCTACTTTATGTTTGAAAAACAACTAGCTTTGACATTATCGCTTACGAGAAAAATGAAATAAAGAATCAACTAGTTTTTGCAGAGAACTTTCCTGTCTTTCCAAAGCAAAAAATGATTGTTTTCGTTTCCAATGTTCATTACAAAAATTGATCATTATTTGAATTGGTGGTTTTGGCTCAATACTGTTAACTGGTTATGTAGACAGATTTTCTTGCATCGTTGCGTACATATTTAAGGAGATGATAAAGGATATTTGTTGATTTTCTCTTTCTTATTTATTCTACTTTGTATTCTCATTCCTCTTGCACCTGATCTTACTTTCCAAGCACATAGTGTGCTTTTCCGTTTGCTTGTTTCAGAAGGAACGGTCTGTGATGAATTTGTTGTTTTATAATTTCGTATTGAAAAGGTTCATATTTTCAAGTTTTCAACGTTTCAAAGTTATACACATATCAAATTTATAATGTTATGCTTCTATCCTTTCATGGACTGCAGATGTTTCACTTGATTCCAACACAAGGAGGAAGTTTCTACGTGCAGAATGACATATTTCGCTTGAACTATGCTTGAAGGGTTCTGCGTTCAATTATCTCCTGGTCATATTTTCTTGATTGATTCGACAAAGATAGTATTATAGCAAGATATTGCTTCCATTTCACAGTCATTGAGAGACTATTTTTTCCTGTAATGGTTTAGTGAATTGATTGATGAACTTGGCTTCCCTCAGAGTTTAATGGAATTGAACGAGGCTTTAAGAAGATTGTTATCAAAAAATGAT</genome_strand>
        <mrna_strand>ATCAGCTCAGACAATAAGAGCGCGCGGCGCAGTCATAAAAAGGGCTCTTTCAATAGCCAGTAGCGTACTGTTGGACTTGAGTTGACACACGCAAATCAGAGTGAGAAGTAGAGCGACCGATTTTCCGATTTGCTAATGGATCCCGACGCCGTAGCGAAGGCATTTGTGGACTACTACTACACCACCTTCGATACCAATCGGGCTGGACTTGCTAGCGTCTACCAGGAAAGCTCTGTACTGTCTTTTGAGGGTCAGAAGTATCAGGGGACTCAAAGTATCTCCGGTAAGCTCACCGGTCTACCTTTCCAGCAGTGCAAGCACCAGATCAACACCGTTGATTGTCAGCCCTCTGGTGCTGCCGGGGGAATGCTTGTCTTTGTCAGCGGCAATCTCAGCCTTCCAGGCGAACAACACACCCTCAAGTTCAGTCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTTCACTTGATTCCAACACAAGGAGGAAGTTTCTACGTGCAGAATGACATATTTCGCTTGAACTATGCTTGAAGGGTTCTGCGTTCAATTATCTCCTGGTCATATTTTCTTGATTGATTCGACANAGATAGTATTATAGCAAGATATTGCTTTCATTTCACAGTCATTGAGAGACTATTTTTTCCTGTAATGGTTTAGTGAATTGATTGATGAACTTGGCTTCCNTCAGAGTTTAATGGAATTG-ACGAGGCTTTTAGAAGATTGTTATCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E341804" ref_strand="+" ref_description="SGN-E341804 [cTOF-9-K4]">
      <seq>ttgagttgacacacgcaaatcagagtgagaagtagagcgaccgattttccgatttgctaatggatcccgacgccgtagcgaaggcatttgtggactactactacaccaccttcgataccaatcgggctggacttgctagcgtctaccaggaaagctctgtactgtcttttgagggtcagaagtatcaggggactcaaagtatctccggtaagctcaccggtctacctttccagcagtgcaagcaccagatcaacaccgttgattgtcagccctctggtgctgccgggggaatgcttgtctttgtcagcggcaatctcagccttccaggcgaacaacacaccctcaagttcagtcagatgtttcacttgattccaacacaaggaggaagtttctacgtgcagaatgacatatttcgcttgaactatgcttgaagggttctgcgttcaattatctcctggtcatattttcttgattgattcgacaaagatagtattatagcaagatattgcttccatttcacagtcattgagagactattttttcctgtaatggtttagtgaattgattgatgaacttggcttccctcagagtttaatggaattgaacgaggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="39848" stop="43025"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40148" g_stop="40503" g_length="356"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="356" r_length="356" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40504" i_stop="42469" i_length="1966">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42470" g_stop="42725" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="357" r_stop="612" r_length="256" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E341804" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E341804" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40148" e_stop="40503"/>
          <exon e_start="42470" e_stop="42725"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGTTGACACACGCAAATCAGAGTGAGAAGTAGAGCGACCGATTTTCCGATTTGCTAATGGATCCCGACGCCGTAGCGAAGGCATTTGTGGACTACTACTACACCACCTTCGATACCAATCGGGCTGGACTTGCTAGCGTCTACCAGGAAAGCTCTGTACTGTCTTTTGAGGGTCAGAAGTATCAGGGGACTCAAAGTATCTCCGGTAAGCTCACCGGTCTACCTTTCCAGCAGTGCAAGCACCAGATCAACACCGTTGATTGTCAGCCCTCTGGTGCTGCCGGGGGAATGCTTGTCTTTGTCAGCGGCAATCTCAGCCTTCCAGGCGAACAACACACCCTCAAGTTCAGTCAGGTACTTCTTCTAGTACTACTACTACTCCATTTGATTATTTTCAGGACTGCTTTCCCATTGTTACATTGACGAGCCATGTGGTTAGGGTTAAATCGCTTGTCTGTATCAGATGCTGTTAGGGTTTAATTTTGCGTGTTTTAGTTTGTGTTTGATCCATTCATTAGTTGATTATTCATTGCGGCTTTCTTATTGAATCTTAAATGGCTTACTTAATCAAAGGGAATAAGACGACTTGATTTTCATTTCTGAATATTAGTGCATTGGAGTACCGTCCTTATACATGAATGTAATTATCACTGCAATAGACTTGTAGTACTTTATGGAGTGTATACCACTAGTTCACTGTTTAACCATTTGTGGATTGCTTAATTGGTTGTCCTTGTGGTAGGGAAATGGGACTACATGAGATTCTCAAATTTGAATAAGGCAGGTGGAGTTTTGTTTTTCAGTTGCTATTATTTGAAGGGACAAACTAGATTCTATGGTCTTAAGAATCAATGGTTTAATGTAAGATTGTGACACAAACTACCCGCTAGTGTGGCCTTGATCATATCACTATTCTAGTATGATAGCTGAATTACATGGTGAAGAGAACTCTGCAGTTTCTTAAGAAGCCATTAAGGAATCCGTGTGTACTGTGATATCATACGATAGTCCATTATTTTCCCTCGATCAGTTGTTTGTTTTATTCATTTAACTTTGTATTGTATGAAGACGAGTTCTCTTGGATTAAGTGTGGTAGCCTTACTCATATTTTTTAAGTTTAGGCCATTTCGTTTTAACTTGAAAATGTTGTTTACTTGTGTACCACTAGATTCTGACTGTTCTAACAAGATTCCTTATGGATATGCAAATACATTTGAATTCTACTGTCTTAGAGTTCAACCTATGTACATGTGCTTTAAGTGCTCCTTCTTCATGGTCTTTTTCTTGATGCGACTTTTTTCAATAGTTCAAGGAAAAGTTCCTAAACATAAAAAATAATGTGTTGCTTGTTTCTATAATTATTTGATTGGATTGACTGGCCCAACTTTGCAATTATTCGATAGAATTCACTTTGTGTGTGTTTAAGTGCTCTTTCCTCCTTGTCTTTATCGATGATATCACTTCTTTCAACAACGTGAACAGAAAAACGTGTGTTCAAAAAGTAAAATGAATGGTGTGGCTCTATTATTATTTGATTTGGCAGAAAATGGAAATTGAATACTCTTATATTGCTCTATAAATTCATCAGATAAACTTAGCAAAAATGTAAATCTCTTGGCTCTCCACATTGTGAACACCCTTATATTGCTCCAGCCTCATCGAACAATAGAATGCATTAATGAACAGTTTAATTGGGAAGGTTGTTATACTAGACTGAAGAAGGGTCAGAGAAAGTCTTATAATGGTAGAGTATCGTGCTTTGACTAATTTTGATGTTTTTCTTTTGGACTACACATCTAATGTTTGATCATTTGGTCTTGTGTTGCTACTTTATGTTTGAAAAACAACTAGCTTTGACATTATCGCTTACGAGAAAAATGAAATAAAGAATCAACTAGTTTTTGCAGAGAACTTTCCTGTCTTTCCAAAGCAAAAAATGATTGTTTTCGTTTCCAATGTTCATTACAAAAATTGATCATTATTTGAATTGGTGGTTTTGGCTCAATACTGTTAACTGGTTATGTAGACAGATTTTCTTGCATCGTTGCGTACATATTTAAGGAGATGATAAAGGATATTTGTTGATTTTCTCTTTCTTATTTATTCTACTTTGTATTCTCATTCCTCTTGCACCTGATCTTACTTTCCAAGCACATAGTGTGCTTTTCCGTTTGCTTGTTTCAGAAGGAACGGTCTGTGATGAATTTGTTGTTTTATAATTTCGTATTGAAAAGGTTCATATTTTCAAGTTTTCAACGTTTCAAAGTTATACACATATCAAATTTATAATGTTATGCTTCTATCCTTTCATGGACTGCAGATGTTTCACTTGATTCCAACACAAGGAGGAAGTTTCTACGTGCAGAATGACATATTTCGCTTGAACTATGCTTGAAGGGTTCTGCGTTCAATTATCTCCTGGTCATATTTTCTTGATTGATTCGACAAAGATAGTATTATAGCAAGATATTGCTTCCATTTCACAGTCATTGAGAGACTATTTTTTCCTGTAATGGTTTAGTGAATTGATTGATGAACTTGGCTTCCCTCAGAGTTTAATGGAATTGAACGAGGCT</genome_strand>
        <mrna_strand>TTGAGTTGACACACGCAAATCAGAGTGAGAAGTAGAGCGACCGATTTTCCGATTTGCTAATGGATCCCGACGCCGTAGCGAAGGCATTTGTGGACTACTACTACACCACCTTCGATACCAATCGGGCTGGACTTGCTAGCGTCTACCAGGAAAGCTCTGTACTGTCTTTTGAGGGTCAGAAGTATCAGGGGACTCAAAGTATCTCCGGTAAGCTCACCGGTCTACCTTTCCAGCAGTGCAAGCACCAGATCAACACCGTTGATTGTCAGCCCTCTGGTGCTGCCGGGGGAATGCTTGTCTTTGTCAGCGGCAATCTCAGCCTTCCAGGCGAACAACACACCCTCAAGTTCAGTCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTTCACTTGATTCCAACACAAGGAGGAAGTTTCTACGTGCAGAATGACATATTTCGCTTGAACTATGCTTGAAGGGTTCTGCGTTCAATTATCTCCTGGTCATATTTTCTTGATTGATTCGACAAAGATAGTATTATAGCAAGATATTGCTTCCATTTCACAGTCATTGAGAGACTATTTTTTCCTGTAATGGTTTAGTGAATTGATTGATGAACTTGGCTTCCCTCAGAGTTTAATGGAATTGAACGAGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E715990" ref_strand="+" ref_description="SGN-E715990 [FB15DC10]">
      <seq>gttgacacacgcaaatcagagtgagaagtagagcgaccgattttccgatttgctaatggatcccgacgccgtagcgaaggcatttgtggactactactacaccaccttcgataccaatcgggctggacttgctagcgtctaccaggaaagctctgtactgtcttttgagggtcagaagtatcaggggactcaaagtatctccggtaagctcaccggtctacctttccagcagtgcaagcaccagatcaacaccgttgattgtcagccctctggtgctgccgggggaatgcttgtctttgtcagcggcaatctcagccttccaggcgaacaacacaccctcaagttcagtcagatgtttcacttgattccaacacaaggaggaagtttctacgtgcagaatgacatatttcgcttgaactatgcttgaagggttctgcgttcaattatctcctggtcatattttcttgattgattcgacaaagatagtattatagcaagatattgcttccatttcacagtcattgagagactattttttcctgtaatggtttagtgaattgattgatgaacttggcttccctcagagtttaatggaattgaacgaggctttaagaagattgttatcaaaaaatgatttcttgccaaagcattggcactttcaaaaaannaaannnnaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="39852" stop="43079"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40152" g_stop="40503" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="352" r_length="352" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40504" i_stop="42469" i_length="1966">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42470" g_stop="42778" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="661" r_length="309" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E715990" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E715990" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40152" e_stop="40503"/>
          <exon e_start="42470" e_stop="42778"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGACACACGCAAATCAGAGTGAGAAGTAGAGCGACCGATTTTCCGATTTGCTAATGGATCCCGACGCCGTAGCGAAGGCATTTGTGGACTACTACTACACCACCTTCGATACCAATCGGGCTGGACTTGCTAGCGTCTACCAGGAAAGCTCTGTACTGTCTTTTGAGGGTCAGAAGTATCAGGGGACTCAAAGTATCTCCGGTAAGCTCACCGGTCTACCTTTCCAGCAGTGCAAGCACCAGATCAACACCGTTGATTGTCAGCCCTCTGGTGCTGCCGGGGGAATGCTTGTCTTTGTCAGCGGCAATCTCAGCCTTCCAGGCGAACAACACACCCTCAAGTTCAGTCAGGTACTTCTTCTAGTACTACTACTACTCCATTTGATTATTTTCAGGACTGCTTTCCCATTGTTACATTGACGAGCCATGTGGTTAGGGTTAAATCGCTTGTCTGTATCAGATGCTGTTAGGGTTTAATTTTGCGTGTTTTAGTTTGTGTTTGATCCATTCATTAGTTGATTATTCATTGCGGCTTTCTTATTGAATCTTAAATGGCTTACTTAATCAAAGGGAATAAGACGACTTGATTTTCATTTCTGAATATTAGTGCATTGGAGTACCGTCCTTATACATGAATGTAATTATCACTGCAATAGACTTGTAGTACTTTATGGAGTGTATACCACTAGTTCACTGTTTAACCATTTGTGGATTGCTTAATTGGTTGTCCTTGTGGTAGGGAAATGGGACTACATGAGATTCTCAAATTTGAATAAGGCAGGTGGAGTTTTGTTTTTCAGTTGCTATTATTTGAAGGGACAAACTAGATTCTATGGTCTTAAGAATCAATGGTTTAATGTAAGATTGTGACACAAACTACCCGCTAGTGTGGCCTTGATCATATCACTATTCTAGTATGATAGCTGAATTACATGGTGAAGAGAACTCTGCAGTTTCTTAAGAAGCCATTAAGGAATCCGTGTGTACTGTGATATCATACGATAGTCCATTATTTTCCCTCGATCAGTTGTTTGTTTTATTCATTTAACTTTGTATTGTATGAAGACGAGTTCTCTTGGATTAAGTGTGGTAGCCTTACTCATATTTTTTAAGTTTAGGCCATTTCGTTTTAACTTGAAAATGTTGTTTACTTGTGTACCACTAGATTCTGACTGTTCTAACAAGATTCCTTATGGATATGCAAATACATTTGAATTCTACTGTCTTAGAGTTCAACCTATGTACATGTGCTTTAAGTGCTCCTTCTTCATGGTCTTTTTCTTGATGCGACTTTTTTCAATAGTTCAAGGAAAAGTTCCTAAACATAAAAAATAATGTGTTGCTTGTTTCTATAATTATTTGATTGGATTGACTGGCCCAACTTTGCAATTATTCGATAGAATTCACTTTGTGTGTGTTTAAGTGCTCTTTCCTCCTTGTCTTTATCGATGATATCACTTCTTTCAACAACGTGAACAGAAAAACGTGTGTTCAAAAAGTAAAATGAATGGTGTGGCTCTATTATTATTTGATTTGGCAGAAAATGGAAATTGAATACTCTTATATTGCTCTATAAATTCATCAGATAAACTTAGCAAAAATGTAAATCTCTTGGCTCTCCACATTGTGAACACCCTTATATTGCTCCAGCCTCATCGAACAATAGAATGCATTAATGAACAGTTTAATTGGGAAGGTTGTTATACTAGACTGAAGAAGGGTCAGAGAAAGTCTTATAATGGTAGAGTATCGTGCTTTGACTAATTTTGATGTTTTTCTTTTGGACTACACATCTAATGTTTGATCATTTGGTCTTGTGTTGCTACTTTATGTTTGAAAAACAACTAGCTTTGACATTATCGCTTACGAGAAAAATGAAATAAAGAATCAACTAGTTTTTGCAGAGAACTTTCCTGTCTTTCCAAAGCAAAAAATGATTGTTTTCGTTTCCAATGTTCATTACAAAAATTGATCATTATTTGAATTGGTGGTTTTGGCTCAATACTGTTAACTGGTTATGTAGACAGATTTTCTTGCATCGTTGCGTACATATTTAAGGAGATGATAAAGGATATTTGTTGATTTTCTCTTTCTTATTTATTCTACTTTGTATTCTCATTCCTCTTGCACCTGATCTTACTTTCCAAGCACATAGTGTGCTTTTCCGTTTGCTTGTTTCAGAAGGAACGGTCTGTGATGAATTTGTTGTTTTATAATTTCGTATTGAAAAGGTTCATATTTTCAAGTTTTCAACGTTTCAAAGTTATACACATATCAAATTTATAATGTTATGCTTCTATCCTTTCATGGACTGCAGATGTTTCACTTGATTCCAACACAAGGAGGAAGTTTCTACGTGCAGAATGACATATTTCGCTTGAACTATGCTTGAAGGGTTCTGCGTTCAATTATCTCCTGGTCATATTTTCTTGATTGATTCGACAAAGATAGTATTATAGCAAGATATTGCTTCCATTTCACAGTCATTGAGAGACTATTTTTTCCTGTAATGGTTTAGTGAATTGATTGATGAACTTGGCTTCCCTCAGAGTTTAATGGAATTGAACGAGGCTTTAAGAAGATTGTTATCAAAAAATGATTTCTTGCCAAAGCATTGGCACTTTCA</genome_strand>
        <mrna_strand>GTTGACACACGCAAATCAGAGTGAGAAGTAGAGCGACCGATTTTCCGATTTGCTAATGGATCCCGACGCCGTAGCGAAGGCATTTGTGGACTACTACTACACCACCTTCGATACCAATCGGGCTGGACTTGCTAGCGTCTACCAGGAAAGCTCTGTACTGTCTTTTGAGGGTCAGAAGTATCAGGGGACTCAAAGTATCTCCGGTAAGCTCACCGGTCTACCTTTCCAGCAGTGCAAGCACCAGATCAACACCGTTGATTGTCAGCCCTCTGGTGCTGCCGGGGGAATGCTTGTCTTTGTCAGCGGCAATCTCAGCCTTCCAGGCGAACAACACACCCTCAAGTTCAGTCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTTCACTTGATTCCAACACAAGGAGGAAGTTTCTACGTGCAGAATGACATATTTCGCTTGAACTATGCTTGAAGGGTTCTGCGTTCAATTATCTCCTGGTCATATTTTCTTGATTGATTCGACAAAGATAGTATTATAGCAAGATATTGCTTCCATTTCACAGTCATTGAGAGACTATTTTTTCCTGTAATGGTTTAGTGAATTGATTGATGAACTTGGCTTCCCTCAGAGTTTAATGGAATTGAACGAGGCTTTAAGAAGATTGTTATCAAAAAATGATTTCTTGCCAAAGCATTGGCACTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E716504" ref_strand="+" ref_description="SGN-E716504 [FB17AH10]">
      <seq>cgcaaatcgaagtgagaagtagagcgaccgattttccgatttgctaatggatcccgacgccgtagcgaaggcatttgtggactactactacaccaccttcgataccaatcgggctggacttgctagcgtctaccaggaaagctctgtactgtcttttgagggtcacaagtatcaggggactcaaagtatctccggtaagctcaccggtctacctttccagcagtgcgagcaccagatcaacaccgttgattgtcagccctctggtgctgccgggggaatgcttgtctttgtcagcggcaatctcagccttccaggcgaacaacacaccctcaagttcagtcagatgtttcacttgattccaacacgaggaggaagtttctacgtgcagaatgacatatttcgcttgaactatgcttgaagggttctgcgttcaattatctcctggtcatattttcttgattgattcgacaaagatagtattatagcaagatattgcttccatttcacagtcattgagagactattttttcctgtaatggtttagtgaattgattgatgaacttggcttccctcagagtttaatggaattgaacgaggctttaagaagattgttatcncccaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="39861" stop="43042"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40161" g_stop="40503" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="343" r_length="343" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40504" i_stop="42469" i_length="1966">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42470" g_stop="42739" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="613" r_length="270" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="621" polyA_stop="632"/>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E716504" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E716504" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40161" e_stop="40503"/>
          <exon e_start="42470" e_stop="42739"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCAAATCAGAGTGAGAAGTAGAGCGACCGATTTTCCGATTTGCTAATGGATCCCGACGCCGTAGCGAAGGCATTTGTGGACTACTACTACACCACCTTCGATACCAATCGGGCTGGACTTGCTAGCGTCTACCAGGAAAGCTCTGTACTGTCTTTTGAGGGTCAGAAGTATCAGGGGACTCAAAGTATCTCCGGTAAGCTCACCGGTCTACCTTTCCAGCAGTGCAAGCACCAGATCAACACCGTTGATTGTCAGCCCTCTGGTGCTGCCGGGGGAATGCTTGTCTTTGTCAGCGGCAATCTCAGCCTTCCAGGCGAACAACACACCCTCAAGTTCAGTCAGGTACTTCTTCTAGTACTACTACTACTCCATTTGATTATTTTCAGGACTGCTTTCCCATTGTTACATTGACGAGCCATGTGGTTAGGGTTAAATCGCTTGTCTGTATCAGATGCTGTTAGGGTTTAATTTTGCGTGTTTTAGTTTGTGTTTGATCCATTCATTAGTTGATTATTCATTGCGGCTTTCTTATTGAATCTTAAATGGCTTACTTAATCAAAGGGAATAAGACGACTTGATTTTCATTTCTGAATATTAGTGCATTGGAGTACCGTCCTTATACATGAATGTAATTATCACTGCAATAGACTTGTAGTACTTTATGGAGTGTATACCACTAGTTCACTGTTTAACCATTTGTGGATTGCTTAATTGGTTGTCCTTGTGGTAGGGAAATGGGACTACATGAGATTCTCAAATTTGAATAAGGCAGGTGGAGTTTTGTTTTTCAGTTGCTATTATTTGAAGGGACAAACTAGATTCTATGGTCTTAAGAATCAATGGTTTAATGTAAGATTGTGACACAAACTACCCGCTAGTGTGGCCTTGATCATATCACTATTCTAGTATGATAGCTGAATTACATGGTGAAGAGAACTCTGCAGTTTCTTAAGAAGCCATTAAGGAATCCGTGTGTACTGTGATATCATACGATAGTCCATTATTTTCCCTCGATCAGTTGTTTGTTTTATTCATTTAACTTTGTATTGTATGAAGACGAGTTCTCTTGGATTAAGTGTGGTAGCCTTACTCATATTTTTTAAGTTTAGGCCATTTCGTTTTAACTTGAAAATGTTGTTTACTTGTGTACCACTAGATTCTGACTGTTCTAACAAGATTCCTTATGGATATGCAAATACATTTGAATTCTACTGTCTTAGAGTTCAACCTATGTACATGTGCTTTAAGTGCTCCTTCTTCATGGTCTTTTTCTTGATGCGACTTTTTTCAATAGTTCAAGGAAAAGTTCCTAAACATAAAAAATAATGTGTTGCTTGTTTCTATAATTATTTGATTGGATTGACTGGCCCAACTTTGCAATTATTCGATAGAATTCACTTTGTGTGTGTTTAAGTGCTCTTTCCTCCTTGTCTTTATCGATGATATCACTTCTTTCAACAACGTGAACAGAAAAACGTGTGTTCAAAAAGTAAAATGAATGGTGTGGCTCTATTATTATTTGATTTGGCAGAAAATGGAAATTGAATACTCTTATATTGCTCTATAAATTCATCAGATAAACTTAGCAAAAATGTAAATCTCTTGGCTCTCCACATTGTGAACACCCTTATATTGCTCCAGCCTCATCGAACAATAGAATGCATTAATGAACAGTTTAATTGGGAAGGTTGTTATACTAGACTGAAGAAGGGTCAGAGAAAGTCTTATAATGGTAGAGTATCGTGCTTTGACTAATTTTGATGTTTTTCTTTTGGACTACACATCTAATGTTTGATCATTTGGTCTTGTGTTGCTACTTTATGTTTGAAAAACAACTAGCTTTGACATTATCGCTTACGAGAAAAATGAAATAAAGAATCAACTAGTTTTTGCAGAGAACTTTCCTGTCTTTCCAAAGCAAAAAATGATTGTTTTCGTTTCCAATGTTCATTACAAAAATTGATCATTATTTGAATTGGTGGTTTTGGCTCAATACTGTTAACTGGTTATGTAGACAGATTTTCTTGCATCGTTGCGTACATATTTAAGGAGATGATAAAGGATATTTGTTGATTTTCTCTTTCTTATTTATTCTACTTTGTATTCTCATTCCTCTTGCACCTGATCTTACTTTCCAAGCACATAGTGTGCTTTTCCGTTTGCTTGTTTCAGAAGGAACGGTCTGTGATGAATTTGTTGTTTTATAATTTCGTATTGAAAAGGTTCATATTTTCAAGTTTTCAACGTTTCAAAGTTATACACATATCAAATTTATAATGTTATGCTTCTATCCTTTCATGGACTGCAGATGTTTCACTTGATTCCAACACAAGGAGGAAGTTTCTACGTGCAGAATGACATATTTCGCTTGAACTATGCTTGAAGGGTTCTGCGTTCAATTATCTCCTGGTCATATTTTCTTGATTGATTCGACAAAGATAGTATTATAGCAAGATATTGCTTCCATTTCACAGTCATTGAGAGACTATTTTTTCCTGTAATGGTTTAGTGAATTGATTGATGAACTTGGCTTCCCTCAGAGTTTAATGGAATTGAACGAGGCTTTAAGAAGATTGTT</genome_strand>
        <mrna_strand>CGCAAATCGAAGTGAGAAGTAGAGCGACCGATTTTCCGATTTGCTAATGGATCCCGACGCCGTAGCGAAGGCATTTGTGGACTACTACTACACCACCTTCGATACCAATCGGGCTGGACTTGCTAGCGTCTACCAGGAAAGCTCTGTACTGTCTTTTGAGGGTCACAAGTATCAGGGGACTCAAAGTATCTCCGGTAAGCTCACCGGTCTACCTTTCCAGCAGTGCGAGCACCAGATCAACACCGTTGATTGTCAGCCCTCTGGTGCTGCCGGGGGAATGCTTGTCTTTGTCAGCGGCAATCTCAGCCTTCCAGGCGAACAACACACCCTCAAGTTCAGTCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTTCACTTGATTCCAACACGAGGAGGAAGTTTCTACGTGCAGAATGACATATTTCGCTTGAACTATGCTTGAAGGGTTCTGCGTTCAATTATCTCCTGGTCATATTTTCTTGATTGATTCGACAAAGATAGTATTATAGCAAGATATTGCTTCCATTTCACAGTCATTGAGAGACTATTTTTTCCTGTAATGGTTTAGTGAATTGATTGATGAACTTGGCTTCCCTCAGAGTTTAATGGAATTGAACGAGGCTTTAAGAAGATTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E311033" ref_strand="+" ref_description="SGN-E311033 [cLEZ-17-H17]">
      <seq>tcagagtgagaagtagagcgaccgattttccgatttgctaatggatcccgacgccgtagcgaaggcatttgtggactactactacaccaccttcgataccaatcgggctggacttgctagcgtctaccaggaaagctctgtactgtcttttgagggtcagaagtatcaggggactcaaagtatctccggtaagctcaccggtctacctttccagcagtgcaagcaccagatcaacaccgttgattgtcagccctctggtgctgccgggggaatgcttgtctttgacagcggcaatctcagccttccaggcgaacaacacaccctcaagttcagtcagatgtttcacttgattccaacacaaggaggaagtttctacgtgcagaatgacatatttcgcttgaactatgcttgaagggttctgcgttcaattatctcctggtcatattttcttgattgattcgacaaagatagtattatagcaagatattgcttccatttcacagtcattgagagactattttttcctgtaatggtttagtgaattgattgatgaacttggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="39867" stop="42993"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40167" g_stop="40503" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="337" r_length="337" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40504" i_stop="42469" i_length="1966">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42470" g_stop="42693" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="338" r_stop="561" r_length="224" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E311033" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>561</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E311033" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40167" e_stop="40503"/>
          <exon e_start="42470" e_stop="42693"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGAGTGAGAAGTAGAGCGACCGATTTTCCGATTTGCTAATGGATCCCGACGCCGTAGCGAAGGCATTTGTGGACTACTACTACACCACCTTCGATACCAATCGGGCTGGACTTGCTAGCGTCTACCAGGAAAGCTCTGTACTGTCTTTTGAGGGTCAGAAGTATCAGGGGACTCAAAGTATCTCCGGTAAGCTCACCGGTCTACCTTTCCAGCAGTGCAAGCACCAGATCAACACCGTTGATTGTCAGCCCTCTGGTGCTGCCGGGGGAATGCTTGTCTTTGTCAGCGGCAATCTCAGCCTTCCAGGCGAACAACACACCCTCAAGTTCAGTCAGGTACTTCTTCTAGTACTACTACTACTCCATTTGATTATTTTCAGGACTGCTTTCCCATTGTTACATTGACGAGCCATGTGGTTAGGGTTAAATCGCTTGTCTGTATCAGATGCTGTTAGGGTTTAATTTTGCGTGTTTTAGTTTGTGTTTGATCCATTCATTAGTTGATTATTCATTGCGGCTTTCTTATTGAATCTTAAATGGCTTACTTAATCAAAGGGAATAAGACGACTTGATTTTCATTTCTGAATATTAGTGCATTGGAGTACCGTCCTTATACATGAATGTAATTATCACTGCAATAGACTTGTAGTACTTTATGGAGTGTATACCACTAGTTCACTGTTTAACCATTTGTGGATTGCTTAATTGGTTGTCCTTGTGGTAGGGAAATGGGACTACATGAGATTCTCAAATTTGAATAAGGCAGGTGGAGTTTTGTTTTTCAGTTGCTATTATTTGAAGGGACAAACTAGATTCTATGGTCTTAAGAATCAATGGTTTAATGTAAGATTGTGACACAAACTACCCGCTAGTGTGGCCTTGATCATATCACTATTCTAGTATGATAGCTGAATTACATGGTGAAGAGAACTCTGCAGTTTCTTAAGAAGCCATTAAGGAATCCGTGTGTACTGTGATATCATACGATAGTCCATTATTTTCCCTCGATCAGTTGTTTGTTTTATTCATTTAACTTTGTATTGTATGAAGACGAGTTCTCTTGGATTAAGTGTGGTAGCCTTACTCATATTTTTTAAGTTTAGGCCATTTCGTTTTAACTTGAAAATGTTGTTTACTTGTGTACCACTAGATTCTGACTGTTCTAACAAGATTCCTTATGGATATGCAAATACATTTGAATTCTACTGTCTTAGAGTTCAACCTATGTACATGTGCTTTAAGTGCTCCTTCTTCATGGTCTTTTTCTTGATGCGACTTTTTTCAATAGTTCAAGGAAAAGTTCCTAAACATAAAAAATAATGTGTTGCTTGTTTCTATAATTATTTGATTGGATTGACTGGCCCAACTTTGCAATTATTCGATAGAATTCACTTTGTGTGTGTTTAAGTGCTCTTTCCTCCTTGTCTTTATCGATGATATCACTTCTTTCAACAACGTGAACAGAAAAACGTGTGTTCAAAAAGTAAAATGAATGGTGTGGCTCTATTATTATTTGATTTGGCAGAAAATGGAAATTGAATACTCTTATATTGCTCTATAAATTCATCAGATAAACTTAGCAAAAATGTAAATCTCTTGGCTCTCCACATTGTGAACACCCTTATATTGCTCCAGCCTCATCGAACAATAGAATGCATTAATGAACAGTTTAATTGGGAAGGTTGTTATACTAGACTGAAGAAGGGTCAGAGAAAGTCTTATAATGGTAGAGTATCGTGCTTTGACTAATTTTGATGTTTTTCTTTTGGACTACACATCTAATGTTTGATCATTTGGTCTTGTGTTGCTACTTTATGTTTGAAAAACAACTAGCTTTGACATTATCGCTTACGAGAAAAATGAAATAAAGAATCAACTAGTTTTTGCAGAGAACTTTCCTGTCTTTCCAAAGCAAAAAATGATTGTTTTCGTTTCCAATGTTCATTACAAAAATTGATCATTATTTGAATTGGTGGTTTTGGCTCAATACTGTTAACTGGTTATGTAGACAGATTTTCTTGCATCGTTGCGTACATATTTAAGGAGATGATAAAGGATATTTGTTGATTTTCTCTTTCTTATTTATTCTACTTTGTATTCTCATTCCTCTTGCACCTGATCTTACTTTCCAAGCACATAGTGTGCTTTTCCGTTTGCTTGTTTCAGAAGGAACGGTCTGTGATGAATTTGTTGTTTTATAATTTCGTATTGAAAAGGTTCATATTTTCAAGTTTTCAACGTTTCAAAGTTATACACATATCAAATTTATAATGTTATGCTTCTATCCTTTCATGGACTGCAGATGTTTCACTTGATTCCAACACAAGGAGGAAGTTTCTACGTGCAGAATGACATATTTCGCTTGAACTATGCTTGAAGGGTTCTGCGTTCAATTATCTCCTGGTCATATTTTCTTGATTGATTCGACAAAGATAGTATTATAGCAAGATATTGCTTCCATTTCACAGTCATTGAGAGACTATTTTTTCCTGTAATGGTTTAGTGAATTGATTGATGAACTTGGCT</genome_strand>
        <mrna_strand>TCAGAGTGAGAAGTAGAGCGACCGATTTTCCGATTTGCTAATGGATCCCGACGCCGTAGCGAAGGCATTTGTGGACTACTACTACACCACCTTCGATACCAATCGGGCTGGACTTGCTAGCGTCTACCAGGAAAGCTCTGTACTGTCTTTTGAGGGTCAGAAGTATCAGGGGACTCAAAGTATCTCCGGTAAGCTCACCGGTCTACCTTTCCAGCAGTGCAAGCACCAGATCAACACCGTTGATTGTCAGCCCTCTGGTGCTGCCGGGGGAATGCTTGTCTTTGACAGCGGCAATCTCAGCCTTCCAGGCGAACAACACACCCTCAAGTTCAGTCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTTCACTTGATTCCAACACAAGGAGGAAGTTTCTACGTGCAGAATGACATATTTCGCTTGAACTATGCTTGAAGGGTTCTGCGTTCAATTATCTCCTGGTCATATTTTCTTGATTGATTCGACAAAGATAGTATTATAGCAAGATATTGCTTCCATTTCACAGTCATTGAGAGACTATTTTTTCCTGTAATGGTTTAGTGAATTGATTGATGAACTTGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E745580" ref_strand="+" ref_description="SGN-E745580 [GI|47105874]">
      <seq>gcccctcaattttctctggttacatttttgttccgcaggctctgagatcagaaaatgggaagcgttccacttccctcgtcgtctctactaatttccagctccagttcctccatttttggaagatcatcatcgacaatttcctatcctcaccggcgattcagaaaggtggatgtttcctgcgattactcttgtttcgaaataagggatgtctcttatcgacctccaggaaccaagatcgatctactgagtcaagtcaacctttccatccctgagaaaagttttggcttgatatttggacggagtggcagtggaaaaactactttattgcagctgattgcagggttaagcaaaccaacatcaggttcaatatatgtgcaaagatatggtgatgatgatcaacagattaagtctcctgaacccttacaacctgaaagagttggcattgttttccaatttcctgagagatactttgttgcggacactgttcttgatgaagttacatttgggtggccaagacaaaagggtggcctacaattaagagagcttcttgcttctagacttcaaaaggccattatgtcggttggtctaacaggaatatctttggataaggatccccattcattaagcggtggttacaaacgtcggctagcccttgctattcagttagttcaaacaccagatttattaatattggatgagcctcttgctggtcttgattggaaggctcgtgcagatgtggcaaaattgttaaaagatctgaagaaggagctaactttacttgttgtcagccatgacctcaaggagttggcatctttggtagatcaatcttggaggatggaaatgggaggagcacttaaaaaagagcctctacccatttaatgcactgaacttataatgttcccaacaatcattttctgatgtaatatatgaggtttttatgagccttgaattgcatacaattcttggagaggtgctcaaggttattgattttgcttcaatccctgaccatcgaggtcttcacatttcatgtaacctctgtaatgtaattaacagtttctgtaatgagttttgtgatggtttctaattttctgtacacttagttcgccgtttaaactctcattaaagtttgatggtctgcaggaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="51866" stop="59612"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52165" g_stop="52325" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="161" r_length="161" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52326" i_stop="52421" i_length="96">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.871" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52422" g_stop="52458" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="198" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52459" i_stop="53495" i_length="1037">
            <donor d_prob="0.960" d_score="0.00"/>
            <acceptor a_prob="0.782" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53496" g_stop="53575" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="278" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53576" i_stop="53886" i_length="311">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.885" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="53887" g_stop="53938" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="330" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="53939" i_stop="54052" i_length="114">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="54053" g_stop="54186" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="464" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="54187" i_stop="54511" i_length="325">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="54512" g_stop="54626" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="579" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="54627" i_stop="54742" i_length="116">
            <donor d_prob="0.867" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="54743" g_stop="54829" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="580" r_stop="666" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="54830" i_stop="54966" i_length="137">
            <donor d_prob="0.574" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="54967" g_stop="55015" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="667" r_stop="715" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="55016" i_stop="56206" i_length="1191">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.607" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="56207" g_stop="56291" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="716" r_stop="800" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="56292" i_stop="57537" i_length="1246">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="57538" g_stop="57668" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="801" r_stop="931" r_length="131" r_score="0.992"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="57669" i_stop="59101" i_length="1433">
            <donor d_prob="0.744" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="59102" g_stop="59309" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="932" r_stop="1139" r_length="208" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1142" polyA_stop="1158"/>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E745580" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1139</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E745580" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52165" e_stop="52325"/>
          <exon e_start="52422" e_stop="52458"/>
          <exon e_start="53496" e_stop="53575"/>
          <exon e_start="53887" e_stop="53938"/>
          <exon e_start="54053" e_stop="54186"/>
          <exon e_start="54512" e_stop="54626"/>
          <exon e_start="54743" e_stop="54829"/>
          <exon e_start="54967" e_stop="55015"/>
          <exon e_start="56207" e_stop="56291"/>
          <exon e_start="57538" e_stop="57668"/>
          <exon e_start="59102" e_stop="59309"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCCTCAATTTTCTCTGGTTACATTTTTGTTCCGCAGGCTCTGAGATCAGAAAATGGGAAGCGTTCCACTTCCCTCGTCGTCTCTACTAATTTCCAGCTCCAGTTCCTCCATTTTTGGAAGATCATCATCGACAATTTCCTATCCTCACCGGCGATTCAGGTGAGTCTCGCTCCTTTAGTTTTTTCTCCGGTTCTTACTGGAAGTGGATACTATAATTTCAGAATTTTCAGCTGAATTTTCTCATTTCTATTACAGAAAGGTGGATGTTTCCTGCGATTACTCTTGTTTCGAAGTAAAGCCCTCTTACCTTTCAACTTTTTAATGGCCATCGTTTTGTACTGTTTTCTAGTATATAACTATATATTATCCTAATTTTAGTTAAATTGATTCATGTAAAGTTCAACGTTGTTTGCTTGCCTACATTTACGATTTTGATTAACCGAATATTCACCTACTCCATTAGTCACGCTATAATTCTTCTTACAAATCATAGGTATTTATTTGTTATAATTGTATCTCTCTGTATCCCGGTTTACTCTTTTCTTCATTATTTGTTTGCTTTCTTTTCTCTGGGTTTAGGGATACTCGATAGCTTCGGTTGTTATGAATTTGCTAACTTCTTAGGTTCAGAGGTTCAGTCTATCTGAAGGAGTTTGGTGGTATTTGAGCTTTTCTGGAACTTGATAACTATTGCAGGCGCTTTGTATCATCTATATACGAGCAGAAGCAATGGATATATCACAGGCTTCCTCTTTTTTCTCTTCTTCTAGGTGACAGCAGTGGCTAAGCCATTAATTCTGATAAGGGGATTCATAAAGAAGAAAAATACAAAATGGCATGCTGATTTGTACCTTTCTACTCTTATGTATAGGGAATTTGAGATCTTTTTTGAACAAGAAAACATAATTTTCACCTATTTGCTAGTTTAACTTCCTGACAATTGAATTCCTTTCGTAGTGTATGGCTCCGTCACTGGACTGGCGGAGAAAGGAGTTATGTTAATTAAGTGGCGAGAACTTATTCTGTAACATATACACTCTTTAACCAAAAAGTCATTCAACAACTTTTTATTAAATTCCCAAATGATTTCTCTTTCTTCAATTTTCCATACCTTAGAGGTTAATAAGTATTAGAAACATGGTATTCCGATAACTCTAGTTCTATCAGAAGTTACAAGGCATGCTACATGCTGAACTCAAATTCAGTCAGTTTTTCTCTTTATAATTTATCTATTTTGGCTGTCCAGAGATTATTGAACATATTGTGGTTGTATAGTGGAGGTGGTAATAATAGATGTGTAATCTTTTTCTTTTTTTTATGGATTTGGAGATAAGGGATGTCTCTTATCGACCTCCAGGAACCAAGATCGATCTACTGAGTCAAGTCAACCTTTCCATCCCTGAGAAAAGGTACAGTCTGTTGCTAAAATTCAAATACACTACATTCCATTACCGCTGGGAAGTTCTTTGTCATCTTTCCAACTGATCCTGCTAAGAGCTAACTAGAGATTATATTGTCCATTTTCTTGATTGGATAGAAGCACACATGAGATCAGAATCCACTGTTTTCATATAGTTTTTGAATGTCCTAACTGTTAATAATATATGTAAAGACATTTCAAGCTGTCTACAGAACAGTATCACTACAAAGAAACTAGAATCTCAAATGCTGAAATGCATTTGAAGAGGCTCTGTGTGGATTTGACATGGATCTTTTGTAGTTTTGGCTTGATATTTGGACGGAGTGGCAGTGGAAAAACTACTTTATTGCAGGTGTTCCTTTTGATTTTGTCTTTATATTCAAATTCATTATAGTTTTTCTCCTTTCAACCTCCAAATGTTACCTTGTTCAGGCTTGTTTTTTTATCTTGGACGTTCTCCATGCAGCTGATTGCAGGGTTAAGCAAACCAACATCAGGTTCAATATATGTGCAAAGATATGGTGATGATGATCAACAGATTAAGTCTCCTGAACCCTTACAACCTGAAAGAGTTGGCATTGTTTTCCAATTTCCTGAGAGGTATTCATTTATTGACTGTGTGTTTCATGTACTGTTAGGATGTTCTTTGCGATACAGTGCAATTTTAATCTTGAGGTTCATAATAAACAGTATGCATTTTCATTTGCTGTTTTTACTGAAAAGACAAAAGCTCCTCCAGTTATCAATTTATTCCAGGTGCAGATTATATGAATCATCAGCATTGCGATTATCTAAACACTATTTTGTTTACCTCTCAATTTTGGTGTTATTGCATGTGTTAGGTAGGAATATGAAATTTAAACAGTTCTTTTTGGTTCCAACAACAGTTTATTTAACTTGATTTGTCTGTTTCACTGTTCTACAGATACTTTGTTGCGGACACTGTTCTTGATGAAGTTACATTTGGGTGGCCAAGACAAAAGGGTGGCCTACAATTAAGAGAGCTTCTTGCTTCTAGACTTCAAAAGGCCATTATGTCGGTATATTCCTTTTAAGTGTGATTTAAACTGTCATTTAATTTTCTATTCCAAAGGAGAAAAGCTCGTCTGCTTTCCAGCAAATCATGACAGCTTTTTATGTGGTTGATAACTCCTAGGTTGGTCTAACAGGAATATCTTTGGATAAGGATCCCCATTCATTAAGCGGTGGTTACAAACGTCGGCTAGCCCTTGCTATTCAGTTAGTAAGGATTTCTCATCTATGAAAAATAGGAAGTGTATATGTGCATTTGTATAAACATGTGTATGCCTATTTGTGTGCAAAATATTATTGATATTTTGATTGATCATCTGTCTGTTAATATATTTTCTCTTTGCACAGGTTCAAACACCAGATTTATTAATATTGGATGAGCCTCTTGCTGGTCTTGGTATGAAGAAACTTTCTATGATCTATTTCATTTTATTTTTTTGGTTTACCTTTTTTTTTTTCCTTTTGATGTTTTTCCCTTATTAGGTGTTTGATTCATCAGTTTGTTATTCTCCCACGTAAGTATGCTTTTAGTACAACAAGAGTTCTGGCTTTACAGAACAAGAATAGTTGTGATTTCTAGGTTAGGTTAAAGATGAAAAGGGTACAGAGGGAATTGCTATGCCTGCACAAGCATTTTACTTTTGTTATATTTGATGAACAACCCTTTTTCTCACCATGGTTATTGAAGTCTTGATTCCATCTTCCATATTCTGTAATCTGAGTAGTCTGTTCTTACAAAAGTCCTAACATGTTATCTTATGACAGAGACACCAAGATTGTCAACTCTTAGTAAACCCTATAGGCTGAGCTGCTAATAATGACAAACAAGTAAGAATAGGACGAGTAGTTAGCTTTGGTAATATAAAGAATAGAGTCAGAGGTTATGCTACCTGCTTTTACTTTATGAAGAATATGCTGAATGTAAATCTTTCTGCCATAGAATATTAATATTCTATGTTAGGTTGCAAATTCTCCAGAACTAAAGGTAACCAGGGTGGGATCTCTATATCTATTTTAGAGGAACTCTTCTTTGGCTTCACTTAAAAGCAATTTTTTTTGCTTCTTCTTGTAGAAGCTCAGAGTTCCTTGTAGGGCTATCAGATCTTATTCACCAAATATACATCGATGTACACATTGTTGTGTTAGAACACTCTTTCTGCTATCTGTGTACTAGCTCTCATATTTGCTTTTGCTGATATTTTACAAGGGCTATTTTGAAATTTTTTATATAGTTAATTCTTTACTATGGTTGGTACAAGTGAAGTTCAAGAGCTTGCCAATTAGATCATACCTCTCTTTGGATTGCATGTAGTATAATGGTAGTGAGTCTTGGTTGTATTAAGCAGCAGGACTGTTTTATGGAGTGAAGCTATTCCCACAAAGATTTTGAAAGCTTATTTTACTATTTCTTTTGTTTGGTATGATATAGCTAGCCTAGTCCTTTTTAAAAATGAAATACTTGTTTTTAAATATAGATTAGTTATTAGATGGACAATTTTTTTTTTTGTATTTTTTGGCTCCACTTCAACTATATTTGAGTACCTAATCTCAGTTTCTAAAAAAGTTCATTGTTTGTGAGGGAAATCAGATTGGAAGGCTCGTGCAGATGTGGCAAAATTGTTAAAAGATCTGAAGAAGGAGCTAACTTTACTTGTTGTCAGCCATGACCTCAAGTAAGTTCCTGATTAGGTCCATTTGTTATTGTTGTTTACATATGTTATTTTATTGGAAATGAATCATCATACTAGATGTCTAACATTATTCACTTGAGGTTTTTATTGATGTCGAGAAAATTTATCGACACTTATTGGTGACGTCGTGAAGGAAGTCAATTATCCATAACTTGTGAACTCTGGAAACTTTTCACAGACTCCCTGTCCCTTTTTCTTGATAACTGGAAAATCCATCGTTTGCCACTTCCAGACTTGGTGGATACTGGGATTTTTCCTCTACCCTACTCCACTAGGCTTGGATCATCAGTCCGGATTCAAACTCCTGCTCTGCTACTACCATACAAGCCGCATATACTACCTTGGCCACTTCCTTGGTCACATATGGTGGTCCCATAGTGATATCAGGTGTCATGATAGAGAAATATTTGTTTACTCTCCGTTTCAAATTTCATAACTTGTTTGCTTCTACAATTTTTTAAAATGTAAAAACACTGAATTTGTATTTTTTTGATAATGTGTATTTCTGTAAGAGAAACAGCCAAAAAAAGAGATGCCTCCCCGGGTCAGCTCAATTTGCAAAGGTTGAGGGACTTGTATCTTGATTCACAAGTTTGATCCCCATGCCAAGAGAACTAAGTTCAATATTTTAGTGGAGAATGGTAGCACATCAGCCTAGAATTCCGAAGGCTGCAGCGGCCCAAAGGGTTGGCTCCGGACTGACTTCTTGATCTTAAAAAAAAAAAGAAGAAAAAAAAGGCAAACAACAGAGTAATTCTTCAAATGTTGAAAATGTAAAATTTGAGTGTGTCAAACTTTTAATAGTTTGCAATAAAAGGTGAAAACTTATCACAGAAAAGGGAAAACTAAAACAATCAATTTGAAATAGAAGGGGTAGATGATGTAAGGATATGCTTTTTTACGCTTACACAGTTGGCAATGTCTGATTAAAAGATTAATAAATCAATTGTGCCTCTACGCAAACTAGTTGGCTGGCTATATTTTTCACTGTTATCCTTAAAGGATTCAGAACTGCATAAGTGAGACAGAACTGCATTCAACTCTCAACTTAGCATAGTCATCATTATTTTGTTTCTGGTACTTCTATTTTCCTAGCAATTCATTTCTGGTTCTTGATTGATATTTAACTGATCGCAGCTGACTGTGAAGATGAGATATATGTACCCTGCTCTTATTGTATTAAAAATTTGGTTCCTTCTCTAATAGCTGCATTGGTGGTAATCTGTAGGGAGTTGGCATCTTTGGTAGATCAATCCTGGAGGATGGAAATGGGAGGAGCACTTAAAAAAGAGCCTCTACCCATTTAATGCACTGAACTTATAATGTTCCCAACAATCATTTTCTGATGTAATATATGAGGTATGACTACTCTATGAGGCCTATTTATCATCATGCTCTTTCAGTTATCGCTGATCTTGACTGGGAAAATGATAAGAGTTCAGGAGTAGCAAATGTGAATAACAATCACAAGATAAAAAATGAATGATTTTGCATCATCGGGAAGGGCTTTGTTGTGAAAGTTAGGATATGCCTTTCATGTACTCTCTTACTGTATTTAGTGCCTATCTCTCTATCAGGCTATCACACAGTATTCTCCTCTAGTTGTGATAGAAGATATATCTACTGATTGGTAAAAAAAGATGTATCTACACAATACAATTTCTAATATTTAGTATTCTTTTTGTATTAGTTTATATCTAGAAAGTTAAACTCTGCAAGAAGAGATAATTATTGCAGCCTCACCATAATGTGAGGATTCAGCGATTTAATGAACATCTTAGCATGACTAATTTCAGTGTCCTCATTGATGGATGAAATGAGTTACTGTCTTCTTATACGATCTCGGACAATGCTCACCTTGAGCTAGCATTGGGGTTTTCCTAATGTCCACTTTTCACAAGAATACTAATTCAACTATTATTAGCAGTACAACGATCACACTTAATGATTATAGCCCATTTCTCTTATATTAGCATTACACATGGAAGGAAGGAGGTACTCATTTGTTCTTCTGTGTTAACTTTTGCTCACACCTCCATACTACATACTCCTAATTATTAGTTGTATATAATACCATTAAAGCTCTTACACTAGATGCACATAGGATCATATTAACACTCTTTCTTGAACATTTTTCCGTCTGGAGCTCCATCACCCAGTCTGAACTACAAATTGAGATAAAAGACTGAGATGATGACACATGAGTATGTTTACGCAACAACAGAAGAGAATGACTGTAATTCTATGCAGTTTTACTTTGCAATCAGCATCTGTTTTAATCCAGTACCCTCTATCGCTGGTGAAGCATCATAACTTGTACCACTTGGTGATACTTGTAAGGTCTGGAAGCTTTTTATCGACTACACCACTTGCTCCAGGGTCCAGAGTTGCAAATCTTTCAGGAAATACTCTAGTTTGATCCTTTAGTTGATTGTTCTCATCTTTAATCCTTGAGGATGAACTCTCCTTTGAAACATTTTTAGGATCTACAACAATATTAAAATCTAGGTGTGAAGTGATATCCTCCACCAAGGTAGTCTACCCCTTGTACCCTTAATAGGATGAGATTTTCAAGAATGTTATGCAAGGCTGTACCCCTAAGAGGTCATAGATAGCAATTTCATTCCAGGTTATACTTGGATTACTTTGTTATATGATGTTTTAAAGAGCTAGATATTTTAATAGGATGCTTACACTTCTTGTCGCATATTAGTTCTTTATTTATGTTCTTTCTTTGCGTTTACCTTAGTTGATTCCAACAATCATTTTTGACAATTAGTAATTACTTGCAGGTTTTTATGAGCCTTGAATTGCATACAATTCTTGGAGAGGTGCTCAAGGTTATTGATTTTGCTTCAATCCCTGACCATCGAGGTCTTCACATTTCATGTAACCTCTGTAATGTAATTAACAGTTTCTGTAATGAGTTTTGAGATGGTTTCTAATTTTCTGTACACTTAGTTCGCCGTTTAAACTCTCATTAAAGTTTGATGGTCTGCA</genome_strand>
        <mrna_strand>GCCCCTCAATTTTCTCTGGTTACATTTTTGTTCCGCAGGCTCTGAGATCAGAAAATGGGAAGCGTTCCACTTCCCTCGTCGTCTCTACTAATTTCCAGCTCCAGTTCCTCCATTTTTGGAAGATCATCATCGACAATTTCCTATCCTCACCGGCGATTCAG................................................................................................AAAGGTGGATGTTTCCTGCGATTACTCTTGTTTCGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGGGATGTCTCTTATCGACCTCCAGGAACCAAGATCGATCTACTGAGTCAAGTCAACCTTTCCATCCCTGAGAAAAG.......................................................................................................................................................................................................................................................................................................................TTTTGGCTTGATATTTGGACGGAGTGGCAGTGGAAAAACTACTTTATTGCAG..................................................................................................................CTGATTGCAGGGTTAAGCAAACCAACATCAGGTTCAATATATGTGCAAAGATATGGTGATGATGATCAACAGATTAAGTCTCCTGAACCCTTACAACCTGAAAGAGTTGGCATTGTTTTCCAATTTCCTGAGAG.....................................................................................................................................................................................................................................................................................................................................ATACTTTGTTGCGGACACTGTTCTTGATGAAGTTACATTTGGGTGGCCAAGACAAAAGGGTGGCCTACAATTAAGAGAGCTTCTTGCTTCTAGACTTCAAAAGGCCATTATGTCG....................................................................................................................GTTGGTCTAACAGGAATATCTTTGGATAAGGATCCCCATTCATTAAGCGGTGGTTACAAACGTCGGCTAGCCCTTGCTATTCAGTTA.........................................................................................................................................GTTCAAACACCAGATTTATTAATATTGGATGAGCCTCTTGCTGGTCTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGAAGGCTCGTGCAGATGTGGCAAAATTGTTAAAAGATCTGAAGAAGGAGCTAACTTTACTTGTTGTCAGCCATGACCTCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTTGGCATCTTTGGTAGATCAATCTTGGAGGATGGAAATGGGAGGAGCACTTAAAAAAGAGCCTCTACCCATTTAATGCACTGAACTTATAATGTTCCCAACAATCATTTTCTGATGTAATATATGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTATGAGCCTTGAATTGCATACAATTCTTGGAGAGGTGCTCAAGGTTATTGATTTTGCTTCAATCCCTGACCATCGAGGTCTTCACATTTCATGTAACCTCTGTAATGTAATTAACAGTTTCTGTAATGAGTTTTGTGATGGTTTCTAATTTTCTGTACACTTAGTTCGCCGTTTAAACTCTCATTAAAGTTTGATGGTCTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E717803" ref_strand="+" ref_description="SGN-E717803 [FC02DB07]">
      <seq>catttttgttccgcaggctctgagatcagaaaaggggaagcgttccacttccctcgtcgtctctactaatttccagctccagttcctccatttttggaagatcatcatcgacaatttcctatcctcaccggcgattcagaaaggtggatgtttcctgcgattactcttgtttcgaaataagggatgtctcttatcgacctccaggaaccaagatcgatctactgagtcaagtcaacctttccatccctgagaaaagttttggcttgatatttggacggagtggcagtggaaaaactactttattgcagctgattgcagggttaagcaaaccaacatcaggttcaatatatgtgcaaagatatggtgatgatgatcaacagattaagtctcctgaacccttacaacctgaaagagttggcattgttttccaatttcctgagagatactttgttgcggacactgttcttgatgaagttacatttgggtggccaagacaaaagggtggcctacaattaagagagcttcttgcttctagacttcaaaaggccattatgtcggttggtctaacaggaatatctttggataaggatccccattcattaagcggtggttacaaacgtcggctagcccttgctattcagttagttcaaacaccagatttattaatattggatgagcctcttgctggtcttgattggaaggctcgtgcagatgtggcaaaattgttaaaagatctgaagaaggagctaactttacttgttgtcagccatgacctcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="51887" stop="56591"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52187" g_stop="52325" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="139" r_length="139" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52326" i_stop="52421" i_length="96">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.871" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52422" g_stop="52458" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="176" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52459" i_stop="53495" i_length="1037">
            <donor d_prob="0.960" d_score="0.00"/>
            <acceptor a_prob="0.782" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53496" g_stop="53575" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="256" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53576" i_stop="53886" i_length="311">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.885" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="53887" g_stop="53938" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="308" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="53939" i_stop="54052" i_length="114">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="54053" g_stop="54186" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="442" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="54187" i_stop="54511" i_length="325">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="54512" g_stop="54626" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="557" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="54627" i_stop="54742" i_length="116">
            <donor d_prob="0.867" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="54743" g_stop="54829" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="558" r_stop="644" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="54830" i_stop="54966" i_length="137">
            <donor d_prob="0.574" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="54967" g_stop="55015" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="645" r_stop="693" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="55016" i_stop="56206" i_length="1191">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.607" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="56207" g_stop="56291" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="694" r_stop="778" r_length="85" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E717803" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>778</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E717803" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52187" e_stop="52325"/>
          <exon e_start="52422" e_stop="52458"/>
          <exon e_start="53496" e_stop="53575"/>
          <exon e_start="53887" e_stop="53938"/>
          <exon e_start="54053" e_stop="54186"/>
          <exon e_start="54512" e_stop="54626"/>
          <exon e_start="54743" e_stop="54829"/>
          <exon e_start="54967" e_stop="55015"/>
          <exon e_start="56207" e_stop="56291"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTTTGTTCCGCAGGCTCTGAGATCAGAAAATGGGAAGCGTTCCACTTCCCTCGTCGTCTCTACTAATTTCCAGCTCCAGTTCCTCCATTTTTGGAAGATCATCATCGACAATTTCCTATCCTCACCGGCGATTCAGGTGAGTCTCGCTCCTTTAGTTTTTTCTCCGGTTCTTACTGGAAGTGGATACTATAATTTCAGAATTTTCAGCTGAATTTTCTCATTTCTATTACAGAAAGGTGGATGTTTCCTGCGATTACTCTTGTTTCGAAGTAAAGCCCTCTTACCTTTCAACTTTTTAATGGCCATCGTTTTGTACTGTTTTCTAGTATATAACTATATATTATCCTAATTTTAGTTAAATTGATTCATGTAAAGTTCAACGTTGTTTGCTTGCCTACATTTACGATTTTGATTAACCGAATATTCACCTACTCCATTAGTCACGCTATAATTCTTCTTACAAATCATAGGTATTTATTTGTTATAATTGTATCTCTCTGTATCCCGGTTTACTCTTTTCTTCATTATTTGTTTGCTTTCTTTTCTCTGGGTTTAGGGATACTCGATAGCTTCGGTTGTTATGAATTTGCTAACTTCTTAGGTTCAGAGGTTCAGTCTATCTGAAGGAGTTTGGTGGTATTTGAGCTTTTCTGGAACTTGATAACTATTGCAGGCGCTTTGTATCATCTATATACGAGCAGAAGCAATGGATATATCACAGGCTTCCTCTTTTTTCTCTTCTTCTAGGTGACAGCAGTGGCTAAGCCATTAATTCTGATAAGGGGATTCATAAAGAAGAAAAATACAAAATGGCATGCTGATTTGTACCTTTCTACTCTTATGTATAGGGAATTTGAGATCTTTTTTGAACAAGAAAACATAATTTTCACCTATTTGCTAGTTTAACTTCCTGACAATTGAATTCCTTTCGTAGTGTATGGCTCCGTCACTGGACTGGCGGAGAAAGGAGTTATGTTAATTAAGTGGCGAGAACTTATTCTGTAACATATACACTCTTTAACCAAAAAGTCATTCAACAACTTTTTATTAAATTCCCAAATGATTTCTCTTTCTTCAATTTTCCATACCTTAGAGGTTAATAAGTATTAGAAACATGGTATTCCGATAACTCTAGTTCTATCAGAAGTTACAAGGCATGCTACATGCTGAACTCAAATTCAGTCAGTTTTTCTCTTTATAATTTATCTATTTTGGCTGTCCAGAGATTATTGAACATATTGTGGTTGTATAGTGGAGGTGGTAATAATAGATGTGTAATCTTTTTCTTTTTTTTATGGATTTGGAGATAAGGGATGTCTCTTATCGACCTCCAGGAACCAAGATCGATCTACTGAGTCAAGTCAACCTTTCCATCCCTGAGAAAAGGTACAGTCTGTTGCTAAAATTCAAATACACTACATTCCATTACCGCTGGGAAGTTCTTTGTCATCTTTCCAACTGATCCTGCTAAGAGCTAACTAGAGATTATATTGTCCATTTTCTTGATTGGATAGAAGCACACATGAGATCAGAATCCACTGTTTTCATATAGTTTTTGAATGTCCTAACTGTTAATAATATATGTAAAGACATTTCAAGCTGTCTACAGAACAGTATCACTACAAAGAAACTAGAATCTCAAATGCTGAAATGCATTTGAAGAGGCTCTGTGTGGATTTGACATGGATCTTTTGTAGTTTTGGCTTGATATTTGGACGGAGTGGCAGTGGAAAAACTACTTTATTGCAGGTGTTCCTTTTGATTTTGTCTTTATATTCAAATTCATTATAGTTTTTCTCCTTTCAACCTCCAAATGTTACCTTGTTCAGGCTTGTTTTTTTATCTTGGACGTTCTCCATGCAGCTGATTGCAGGGTTAAGCAAACCAACATCAGGTTCAATATATGTGCAAAGATATGGTGATGATGATCAACAGATTAAGTCTCCTGAACCCTTACAACCTGAAAGAGTTGGCATTGTTTTCCAATTTCCTGAGAGGTATTCATTTATTGACTGTGTGTTTCATGTACTGTTAGGATGTTCTTTGCGATACAGTGCAATTTTAATCTTGAGGTTCATAATAAACAGTATGCATTTTCATTTGCTGTTTTTACTGAAAAGACAAAAGCTCCTCCAGTTATCAATTTATTCCAGGTGCAGATTATATGAATCATCAGCATTGCGATTATCTAAACACTATTTTGTTTACCTCTCAATTTTGGTGTTATTGCATGTGTTAGGTAGGAATATGAAATTTAAACAGTTCTTTTTGGTTCCAACAACAGTTTATTTAACTTGATTTGTCTGTTTCACTGTTCTACAGATACTTTGTTGCGGACACTGTTCTTGATGAAGTTACATTTGGGTGGCCAAGACAAAAGGGTGGCCTACAATTAAGAGAGCTTCTTGCTTCTAGACTTCAAAAGGCCATTATGTCGGTATATTCCTTTTAAGTGTGATTTAAACTGTCATTTAATTTTCTATTCCAAAGGAGAAAAGCTCGTCTGCTTTCCAGCAAATCATGACAGCTTTTTATGTGGTTGATAACTCCTAGGTTGGTCTAACAGGAATATCTTTGGATAAGGATCCCCATTCATTAAGCGGTGGTTACAAACGTCGGCTAGCCCTTGCTATTCAGTTAGTAAGGATTTCTCATCTATGAAAAATAGGAAGTGTATATGTGCATTTGTATAAACATGTGTATGCCTATTTGTGTGCAAAATATTATTGATATTTTGATTGATCATCTGTCTGTTAATATATTTTCTCTTTGCACAGGTTCAAACACCAGATTTATTAATATTGGATGAGCCTCTTGCTGGTCTTGGTATGAAGAAACTTTCTATGATCTATTTCATTTTATTTTTTTGGTTTACCTTTTTTTTTTTCCTTTTGATGTTTTTCCCTTATTAGGTGTTTGATTCATCAGTTTGTTATTCTCCCACGTAAGTATGCTTTTAGTACAACAAGAGTTCTGGCTTTACAGAACAAGAATAGTTGTGATTTCTAGGTTAGGTTAAAGATGAAAAGGGTACAGAGGGAATTGCTATGCCTGCACAAGCATTTTACTTTTGTTATATTTGATGAACAACCCTTTTTCTCACCATGGTTATTGAAGTCTTGATTCCATCTTCCATATTCTGTAATCTGAGTAGTCTGTTCTTACAAAAGTCCTAACATGTTATCTTATGACAGAGACACCAAGATTGTCAACTCTTAGTAAACCCTATAGGCTGAGCTGCTAATAATGACAAACAAGTAAGAATAGGACGAGTAGTTAGCTTTGGTAATATAAAGAATAGAGTCAGAGGTTATGCTACCTGCTTTTACTTTATGAAGAATATGCTGAATGTAAATCTTTCTGCCATAGAATATTAATATTCTATGTTAGGTTGCAAATTCTCCAGAACTAAAGGTAACCAGGGTGGGATCTCTATATCTATTTTAGAGGAACTCTTCTTTGGCTTCACTTAAAAGCAATTTTTTTTGCTTCTTCTTGTAGAAGCTCAGAGTTCCTTGTAGGGCTATCAGATCTTATTCACCAAATATACATCGATGTACACATTGTTGTGTTAGAACACTCTTTCTGCTATCTGTGTACTAGCTCTCATATTTGCTTTTGCTGATATTTTACAAGGGCTATTTTGAAATTTTTTATATAGTTAATTCTTTACTATGGTTGGTACAAGTGAAGTTCAAGAGCTTGCCAATTAGATCATACCTCTCTTTGGATTGCATGTAGTATAATGGTAGTGAGTCTTGGTTGTATTAAGCAGCAGGACTGTTTTATGGAGTGAAGCTATTCCCACAAAGATTTTGAAAGCTTATTTTACTATTTCTTTTGTTTGGTATGATATAGCTAGCCTAGTCCTTTTTAAAAATGAAATACTTGTTTTTAAATATAGATTAGTTATTAGATGGACAATTTTTTTTTTTGTATTTTTTGGCTCCACTTCAACTATATTTGAGTACCTAATCTCAGTTTCTAAAAAAGTTCATTGTTTGTGAGGGAAATCAGATTGGAAGGCTCGTGCAGATGTGGCAAAATTGTTAAAAGATCTGAAGAAGGAGCTAACTTTACTTGTTGTCAGCCATGACCTCAA</genome_strand>
        <mrna_strand>CATTTTTGTTCCGCAGGCTCTGAGATCAGAAAAGGGGAAGCGTTCCACTTCCCTCGTCGTCTCTACTAATTTCCAGCTCCAGTTCCTCCATTTTTGGAAGATCATCATCGACAATTTCCTATCCTCACCGGCGATTCAG................................................................................................AAAGGTGGATGTTTCCTGCGATTACTCTTGTTTCGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGGGATGTCTCTTATCGACCTCCAGGAACCAAGATCGATCTACTGAGTCAAGTCAACCTTTCCATCCCTGAGAAAAG.......................................................................................................................................................................................................................................................................................................................TTTTGGCTTGATATTTGGACGGAGTGGCAGTGGAAAAACTACTTTATTGCAG..................................................................................................................CTGATTGCAGGGTTAAGCAAACCAACATCAGGTTCAATATATGTGCAAAGATATGGTGATGATGATCAACAGATTAAGTCTCCTGAACCCTTACAACCTGAAAGAGTTGGCATTGTTTTCCAATTTCCTGAGAG.....................................................................................................................................................................................................................................................................................................................................ATACTTTGTTGCGGACACTGTTCTTGATGAAGTTACATTTGGGTGGCCAAGACAAAAGGGTGGCCTACAATTAAGAGAGCTTCTTGCTTCTAGACTTCAAAAGGCCATTATGTCG....................................................................................................................GTTGGTCTAACAGGAATATCTTTGGATAAGGATCCCCATTCATTAAGCGGTGGTTACAAACGTCGGCTAGCCCTTGCTATTCAGTTA.........................................................................................................................................GTTCAAACACCAGATTTATTAATATTGGATGAGCCTCTTGCTGGTCTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGAAGGCTCGTGCAGATGTGGCAAAATTGTTAAAAGATCTGAAGAAGGAGCTAACTTTACTTGTTGTCAGCCATGACCTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E698428" ref_strand="+" ref_description="SGN-E698428 [FA06BB03]">
      <seq>ccgattcgttccacttccctcgtcgtctctactaatttccagctccagttcctccatttttggaagatcatcatcgacaatttcctatcctcaccggcgattcagaaaggtggatgtttcctgcgattactcttgtttcgaaataagggatgtctcttatcgacctccaggaaccaagatcgatctactgagtcaagtcaacctttccatccctgagaaaagttttggcttgatatttggacggagtggcagtggaaaaactactttattgcagctgattgcagggttaagcaaaccaacatcaggttcaatatatgtgcaaagatatggtgatgatgatcaacagattaagtctcctgaacccttacaacctgaaagagttggcattgttttccaatttcctgagagatactttgttgcggacactgttcttgatgaagttacatttgggtggccaagacaaaagggtggcctacaattaagagagcttcttgcttctagacttcaaaaggccattatgtcggttggtctaacaggaatatctttggataaggatccccattcattaagcggtggttacaaacgtcggctagcccttgctattcagttagttcaaacaccagatttattaatattggatgagcctcttgctggtcttgattggaaggctcgtgcagatgtggcaaaattgttaaaagatctgaagaaggagctacctttacttgttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="51923" stop="56576"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52221" g_stop="52325" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52326" i_stop="52421" i_length="96">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.871" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52422" g_stop="52458" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="142" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52459" i_stop="53495" i_length="1037">
            <donor d_prob="0.960" d_score="0.00"/>
            <acceptor a_prob="0.782" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53496" g_stop="53575" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="222" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53576" i_stop="53886" i_length="311">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.885" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="53887" g_stop="53938" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="274" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="53939" i_stop="54052" i_length="114">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="54053" g_stop="54186" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="408" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="54187" i_stop="54511" i_length="325">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="54512" g_stop="54626" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="523" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="54627" i_stop="54742" i_length="116">
            <donor d_prob="0.867" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="54743" g_stop="54829" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="524" r_stop="610" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="54830" i_stop="54966" i_length="137">
            <donor d_prob="0.574" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="54967" g_stop="55015" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="611" r_stop="659" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="55016" i_stop="56206" i_length="1191">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.607" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="56207" g_stop="56276" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="660" r_stop="729" r_length="70" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E698428" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>729</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E698428" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52221" e_stop="52325"/>
          <exon e_start="52422" e_stop="52458"/>
          <exon e_start="53496" e_stop="53575"/>
          <exon e_start="53887" e_stop="53938"/>
          <exon e_start="54053" e_stop="54186"/>
          <exon e_start="54512" e_stop="54626"/>
          <exon e_start="54743" e_stop="54829"/>
          <exon e_start="54967" e_stop="55015"/>
          <exon e_start="56207" e_stop="56276"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGAAGCGTTCCACTTCCCTCGTCGTCTCTACTAATTTCCAGCTCCAGTTCCTCCATTTTTGGAAGATCATCATCGACAATTTCCTATCCTCACCGGCGATTCAGGTGAGTCTCGCTCCTTTAGTTTTTTCTCCGGTTCTTACTGGAAGTGGATACTATAATTTCAGAATTTTCAGCTGAATTTTCTCATTTCTATTACAGAAAGGTGGATGTTTCCTGCGATTACTCTTGTTTCGAAGTAAAGCCCTCTTACCTTTCAACTTTTTAATGGCCATCGTTTTGTACTGTTTTCTAGTATATAACTATATATTATCCTAATTTTAGTTAAATTGATTCATGTAAAGTTCAACGTTGTTTGCTTGCCTACATTTACGATTTTGATTAACCGAATATTCACCTACTCCATTAGTCACGCTATAATTCTTCTTACAAATCATAGGTATTTATTTGTTATAATTGTATCTCTCTGTATCCCGGTTTACTCTTTTCTTCATTATTTGTTTGCTTTCTTTTCTCTGGGTTTAGGGATACTCGATAGCTTCGGTTGTTATGAATTTGCTAACTTCTTAGGTTCAGAGGTTCAGTCTATCTGAAGGAGTTTGGTGGTATTTGAGCTTTTCTGGAACTTGATAACTATTGCAGGCGCTTTGTATCATCTATATACGAGCAGAAGCAATGGATATATCACAGGCTTCCTCTTTTTTCTCTTCTTCTAGGTGACAGCAGTGGCTAAGCCATTAATTCTGATAAGGGGATTCATAAAGAAGAAAAATACAAAATGGCATGCTGATTTGTACCTTTCTACTCTTATGTATAGGGAATTTGAGATCTTTTTTGAACAAGAAAACATAATTTTCACCTATTTGCTAGTTTAACTTCCTGACAATTGAATTCCTTTCGTAGTGTATGGCTCCGTCACTGGACTGGCGGAGAAAGGAGTTATGTTAATTAAGTGGCGAGAACTTATTCTGTAACATATACACTCTTTAACCAAAAAGTCATTCAACAACTTTTTATTAAATTCCCAAATGATTTCTCTTTCTTCAATTTTCCATACCTTAGAGGTTAATAAGTATTAGAAACATGGTATTCCGATAACTCTAGTTCTATCAGAAGTTACAAGGCATGCTACATGCTGAACTCAAATTCAGTCAGTTTTTCTCTTTATAATTTATCTATTTTGGCTGTCCAGAGATTATTGAACATATTGTGGTTGTATAGTGGAGGTGGTAATAATAGATGTGTAATCTTTTTCTTTTTTTTATGGATTTGGAGATAAGGGATGTCTCTTATCGACCTCCAGGAACCAAGATCGATCTACTGAGTCAAGTCAACCTTTCCATCCCTGAGAAAAGGTACAGTCTGTTGCTAAAATTCAAATACACTACATTCCATTACCGCTGGGAAGTTCTTTGTCATCTTTCCAACTGATCCTGCTAAGAGCTAACTAGAGATTATATTGTCCATTTTCTTGATTGGATAGAAGCACACATGAGATCAGAATCCACTGTTTTCATATAGTTTTTGAATGTCCTAACTGTTAATAATATATGTAAAGACATTTCAAGCTGTCTACAGAACAGTATCACTACAAAGAAACTAGAATCTCAAATGCTGAAATGCATTTGAAGAGGCTCTGTGTGGATTTGACATGGATCTTTTGTAGTTTTGGCTTGATATTTGGACGGAGTGGCAGTGGAAAAACTACTTTATTGCAGGTGTTCCTTTTGATTTTGTCTTTATATTCAAATTCATTATAGTTTTTCTCCTTTCAACCTCCAAATGTTACCTTGTTCAGGCTTGTTTTTTTATCTTGGACGTTCTCCATGCAGCTGATTGCAGGGTTAAGCAAACCAACATCAGGTTCAATATATGTGCAAAGATATGGTGATGATGATCAACAGATTAAGTCTCCTGAACCCTTACAACCTGAAAGAGTTGGCATTGTTTTCCAATTTCCTGAGAGGTATTCATTTATTGACTGTGTGTTTCATGTACTGTTAGGATGTTCTTTGCGATACAGTGCAATTTTAATCTTGAGGTTCATAATAAACAGTATGCATTTTCATTTGCTGTTTTTACTGAAAAGACAAAAGCTCCTCCAGTTATCAATTTATTCCAGGTGCAGATTATATGAATCATCAGCATTGCGATTATCTAAACACTATTTTGTTTACCTCTCAATTTTGGTGTTATTGCATGTGTTAGGTAGGAATATGAAATTTAAACAGTTCTTTTTGGTTCCAACAACAGTTTATTTAACTTGATTTGTCTGTTTCACTGTTCTACAGATACTTTGTTGCGGACACTGTTCTTGATGAAGTTACATTTGGGTGGCCAAGACAAAAGGGTGGCCTACAATTAAGAGAGCTTCTTGCTTCTAGACTTCAAAAGGCCATTATGTCGGTATATTCCTTTTAAGTGTGATTTAAACTGTCATTTAATTTTCTATTCCAAAGGAGAAAAGCTCGTCTGCTTTCCAGCAAATCATGACAGCTTTTTATGTGGTTGATAACTCCTAGGTTGGTCTAACAGGAATATCTTTGGATAAGGATCCCCATTCATTAAGCGGTGGTTACAAACGTCGGCTAGCCCTTGCTATTCAGTTAGTAAGGATTTCTCATCTATGAAAAATAGGAAGTGTATATGTGCATTTGTATAAACATGTGTATGCCTATTTGTGTGCAAAATATTATTGATATTTTGATTGATCATCTGTCTGTTAATATATTTTCTCTTTGCACAGGTTCAAACACCAGATTTATTAATATTGGATGAGCCTCTTGCTGGTCTTGGTATGAAGAAACTTTCTATGATCTATTTCATTTTATTTTTTTGGTTTACCTTTTTTTTTTTCCTTTTGATGTTTTTCCCTTATTAGGTGTTTGATTCATCAGTTTGTTATTCTCCCACGTAAGTATGCTTTTAGTACAACAAGAGTTCTGGCTTTACAGAACAAGAATAGTTGTGATTTCTAGGTTAGGTTAAAGATGAAAAGGGTACAGAGGGAATTGCTATGCCTGCACAAGCATTTTACTTTTGTTATATTTGATGAACAACCCTTTTTCTCACCATGGTTATTGAAGTCTTGATTCCATCTTCCATATTCTGTAATCTGAGTAGTCTGTTCTTACAAAAGTCCTAACATGTTATCTTATGACAGAGACACCAAGATTGTCAACTCTTAGTAAACCCTATAGGCTGAGCTGCTAATAATGACAAACAAGTAAGAATAGGACGAGTAGTTAGCTTTGGTAATATAAAGAATAGAGTCAGAGGTTATGCTACCTGCTTTTACTTTATGAAGAATATGCTGAATGTAAATCTTTCTGCCATAGAATATTAATATTCTATGTTAGGTTGCAAATTCTCCAGAACTAAAGGTAACCAGGGTGGGATCTCTATATCTATTTTAGAGGAACTCTTCTTTGGCTTCACTTAAAAGCAATTTTTTTTGCTTCTTCTTGTAGAAGCTCAGAGTTCCTTGTAGGGCTATCAGATCTTATTCACCAAATATACATCGATGTACACATTGTTGTGTTAGAACACTCTTTCTGCTATCTGTGTACTAGCTCTCATATTTGCTTTTGCTGATATTTTACAAGGGCTATTTTGAAATTTTTTATATAGTTAATTCTTTACTATGGTTGGTACAAGTGAAGTTCAAGAGCTTGCCAATTAGATCATACCTCTCTTTGGATTGCATGTAGTATAATGGTAGTGAGTCTTGGTTGTATTAAGCAGCAGGACTGTTTTATGGAGTGAAGCTATTCCCACAAAGATTTTGAAAGCTTATTTTACTATTTCTTTTGTTTGGTATGATATAGCTAGCCTAGTCCTTTTTAAAAATGAAATACTTGTTTTTAAATATAGATTAGTTATTAGATGGACAATTTTTTTTTTTGTATTTTTTGGCTCCACTTCAACTATATTTGAGTACCTAATCTCAGTTTCTAAAAAAGTTCATTGTTTGTGAGGGAAATCAGATTGGAAGGCTCGTGCAGATGTGGCAAAATTGTTAAAAGATCTGAAGAAGGAGCTAACTTTACTTGTTGT</genome_strand>
        <mrna_strand>CCGATTCGTTCCACTTCCCTCGTCGTCTCTACTAATTTCCAGCTCCAGTTCCTCCATTTTTGGAAGATCATCATCGACAATTTCCTATCCTCACCGGCGATTCAG................................................................................................AAAGGTGGATGTTTCCTGCGATTACTCTTGTTTCGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGGGATGTCTCTTATCGACCTCCAGGAACCAAGATCGATCTACTGAGTCAAGTCAACCTTTCCATCCCTGAGAAAAG.......................................................................................................................................................................................................................................................................................................................TTTTGGCTTGATATTTGGACGGAGTGGCAGTGGAAAAACTACTTTATTGCAG..................................................................................................................CTGATTGCAGGGTTAAGCAAACCAACATCAGGTTCAATATATGTGCAAAGATATGGTGATGATGATCAACAGATTAAGTCTCCTGAACCCTTACAACCTGAAAGAGTTGGCATTGTTTTCCAATTTCCTGAGAG.....................................................................................................................................................................................................................................................................................................................................ATACTTTGTTGCGGACACTGTTCTTGATGAAGTTACATTTGGGTGGCCAAGACAAAAGGGTGGCCTACAATTAAGAGAGCTTCTTGCTTCTAGACTTCAAAAGGCCATTATGTCG....................................................................................................................GTTGGTCTAACAGGAATATCTTTGGATAAGGATCCCCATTCATTAAGCGGTGGTTACAAACGTCGGCTAGCCCTTGCTATTCAGTTA.........................................................................................................................................GTTCAAACACCAGATTTATTAATATTGGATGAGCCTCTTGCTGGTCTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGAAGGCTCGTGCAGATGTGGCAAAATTGTTAAAAGATCTGAAGAAGGAGCTACCTTTACTTGTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E322942" ref_strand="+" ref_description="SGN-E322942 [cTOB-30-K2]">
      <seq>tcttttcttcattatttgtttgctttcttttctctgggtttagggatactcgatagcttcggttgttatgaatttgctaacttcttaggttcagaggttcagtctatctgaaggagtttggtggtatttgagcttttctggaacttgataactattgcaggcgctttgtatcatctatatacgagcagaagcaatggatatatcacaggcttcctcttttttctcttcttctaggtgacagcagtggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="52403" stop="53251"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52703" g_stop="52951" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="249" r_length="249" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E322942" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>249</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E322942" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52703" e_stop="52951"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTTCTTCATTATTTGTTTGCTTTCTTTTCTCTGGGTTTAGGGATACTCGATAGCTTCGGTTGTTATGAATTTGCTAACTTCTTAGGTTCAGAGGTTCAGTCTATCTGAAGGAGTTTGGTGGTATTTGAGCTTTTCTGGAACTTGATAACTATTGCAGGCGCTTTGTATCATCTATATACGAGCAGAAGCAATGGATATATCACAGGCTTCCTCTTTTTTCTCTTCTTCTAGGTGACAGCAGTGGCT</genome_strand>
        <mrna_strand>TCTTTTCTTCATTATTTGTTTGCTTTCTTTTCTCTGGGTTTAGGGATACTCGATAGCTTCGGTTGTTATGAATTTGCTAACTTCTTAGGTTCAGAGGTTCAGTCTATCTGAAGGAGTTTGGTGGTATTTGAGCTTTTCTGGAACTTGATAACTATTGCAGGCGCTTTGTATCATCTATATACGAGCAGAAGCAATGGATATATCACAGGCTTCCTCTTTTTTCTCTTCTTCTAGGTGACAGCAGTGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E203446" ref_strand="+" ref_description="SGN-E203446 [cLEC-15-G3]">
      <seq>gcgctttgtatcatctatatacgagcagaagcaatggatatatcacaggcttcctcttttttctcttcttctaggtgacagcagtggctaagccattaattctgataaggggattcataaagaagaaaaatacaaaatggcatgctgatttgtacctttctactcttatgtatagggaatttgagatcttttttgaacaagaaaacataattttcacctatttgctagtttaacttcctgacaattgaattcctttcgtagtgtatggctccgtcactggactggcggagaaaggagttatgttaattaagtggcgagaacttattctgtaacatatacactctntaaccaaaaagtcattcaacaactttttattaaattcccaaatgatttctctttcttcaattttccata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="52563" stop="53576"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52863" g_stop="53276" g_length="414"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="414" r_length="414" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E203446" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>414</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E203446" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52863" e_stop="53276"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGCTTTGTATCATCTATATACGAGCAGAAGCAATGGATATATCACAGGCTTCCTCTTTTTTCTCTTCTTCTAGGTGACAGCAGTGGCTAAGCCATTAATTCTGATAAGGGGATTCATAAAGAAGAAAAATACAAAATGGCATGCTGATTTGTACCTTTCTACTCTTATGTATAGGGAATTTGAGATCTTTTTTGAACAAGAAAACATAATTTTCACCTATTTGCTAGTTTAACTTCCTGACAATTGAATTCCTTTCGTAGTGTATGGCTCCGTCACTGGACTGGCGGAGAAAGGAGTTATGTTAATTAAGTGGCGAGAACTTATTCTGTAACATATACACTCTTTAACCAAAAAGTCATTCAACAACTTTTTATTAAATTCCCAAATGATTTCTCTTTCTTCAATTTTCCATA</genome_strand>
        <mrna_strand>GCGCTTTGTATCATCTATATACGAGCAGAAGCAATGGATATATCACAGGCTTCCTCTTTTTTCTCTTCTTCTAGGTGACAGCAGTGGCTAAGCCATTAATTCTGATAAGGGGATTCATAAAGAAGAAAAATACAAAATGGCATGCTGATTTGTACCTTTCTACTCTTATGTATAGGGAATTTGAGATCTTTTTTGAACAAGAAAACATAATTTTCACCTATTTGCTAGTTTAACTTCCTGACAATTGAATTCCTTTCGTAGTGTATGGCTCCGTCACTGGACTGGCGGAGAAAGGAGTTATGTTAATTAAGTGGCGAGAACTTATTCTGTAACATATACACTCTNTAACCAAAAAGTCATTCAACAACTTTTTATTAAATTCCCAAATGATTTCTCTTTCTTCAATTTTCCATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E353597" ref_strand="+" ref_description="SGN-E353597 [cTOS-15-J16]">
      <seq>aaacaccagatttattaatattggatgagcctcttgctggtcttgattggaaggctcgtgcagatgtggcaaaattgttaaaagatctgaagaaggagctaactttacttgttgtcagccatgacctcaaggagttggcatctttggtagatcaatcctggaggatggaaatgggaggagcacttaaaaaagagcctctacccatttaatgcactgaacttataatgttcccaacaatcattttctgatgtaatatatgaggtttttatgagccttgaattgcatacaattcttggaaaggtgctcaaggttattgattttgcttcaatccctgaccatcgaggtcttcacatttcatgtaacctctgtaatgtaattaacagtttctgtaatgagttttgagatggtttctaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="54671" stop="59554"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54971" g_stop="55015" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="45" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55016" i_stop="56206" i_length="1191">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.607" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56207" g_stop="56291" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="46" r_stop="130" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56292" i_stop="57537" i_length="1246">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57538" g_stop="57668" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="261" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57669" i_stop="59101" i_length="1433">
            <donor d_prob="0.744" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="59102" g_stop="59253" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="413" r_length="152" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="414" polyA_stop="426"/>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E353597" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>413</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E353597" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54971" e_stop="55015"/>
          <exon e_start="56207" e_stop="56291"/>
          <exon e_start="57538" e_stop="57668"/>
          <exon e_start="59102" e_stop="59253"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACACCAGATTTATTAATATTGGATGAGCCTCTTGCTGGTCTTGGTATGAAGAAACTTTCTATGATCTATTTCATTTTATTTTTTTGGTTTACCTTTTTTTTTTTCCTTTTGATGTTTTTCCCTTATTAGGTGTTTGATTCATCAGTTTGTTATTCTCCCACGTAAGTATGCTTTTAGTACAACAAGAGTTCTGGCTTTACAGAACAAGAATAGTTGTGATTTCTAGGTTAGGTTAAAGATGAAAAGGGTACAGAGGGAATTGCTATGCCTGCACAAGCATTTTACTTTTGTTATATTTGATGAACAACCCTTTTTCTCACCATGGTTATTGAAGTCTTGATTCCATCTTCCATATTCTGTAATCTGAGTAGTCTGTTCTTACAAAAGTCCTAACATGTTATCTTATGACAGAGACACCAAGATTGTCAACTCTTAGTAAACCCTATAGGCTGAGCTGCTAATAATGACAAACAAGTAAGAATAGGACGAGTAGTTAGCTTTGGTAATATAAAGAATAGAGTCAGAGGTTATGCTACCTGCTTTTACTTTATGAAGAATATGCTGAATGTAAATCTTTCTGCCATAGAATATTAATATTCTATGTTAGGTTGCAAATTCTCCAGAACTAAAGGTAACCAGGGTGGGATCTCTATATCTATTTTAGAGGAACTCTTCTTTGGCTTCACTTAAAAGCAATTTTTTTTGCTTCTTCTTGTAGAAGCTCAGAGTTCCTTGTAGGGCTATCAGATCTTATTCACCAAATATACATCGATGTACACATTGTTGTGTTAGAACACTCTTTCTGCTATCTGTGTACTAGCTCTCATATTTGCTTTTGCTGATATTTTACAAGGGCTATTTTGAAATTTTTTATATAGTTAATTCTTTACTATGGTTGGTACAAGTGAAGTTCAAGAGCTTGCCAATTAGATCATACCTCTCTTTGGATTGCATGTAGTATAATGGTAGTGAGTCTTGGTTGTATTAAGCAGCAGGACTGTTTTATGGAGTGAAGCTATTCCCACAAAGATTTTGAAAGCTTATTTTACTATTTCTTTTGTTTGGTATGATATAGCTAGCCTAGTCCTTTTTAAAAATGAAATACTTGTTTTTAAATATAGATTAGTTATTAGATGGACAATTTTTTTTTTTGTATTTTTTGGCTCCACTTCAACTATATTTGAGTACCTAATCTCAGTTTCTAAAAAAGTTCATTGTTTGTGAGGGAAATCAGATTGGAAGGCTCGTGCAGATGTGGCAAAATTGTTAAAAGATCTGAAGAAGGAGCTAACTTTACTTGTTGTCAGCCATGACCTCAAGTAAGTTCCTGATTAGGTCCATTTGTTATTGTTGTTTACATATGTTATTTTATTGGAAATGAATCATCATACTAGATGTCTAACATTATTCACTTGAGGTTTTTATTGATGTCGAGAAAATTTATCGACACTTATTGGTGACGTCGTGAAGGAAGTCAATTATCCATAACTTGTGAACTCTGGAAACTTTTCACAGACTCCCTGTCCCTTTTTCTTGATAACTGGAAAATCCATCGTTTGCCACTTCCAGACTTGGTGGATACTGGGATTTTTCCTCTACCCTACTCCACTAGGCTTGGATCATCAGTCCGGATTCAAACTCCTGCTCTGCTACTACCATACAAGCCGCATATACTACCTTGGCCACTTCCTTGGTCACATATGGTGGTCCCATAGTGATATCAGGTGTCATGATAGAGAAATATTTGTTTACTCTCCGTTTCAAATTTCATAACTTGTTTGCTTCTACAATTTTTTAAAATGTAAAAACACTGAATTTGTATTTTTTTGATAATGTGTATTTCTGTAAGAGAAACAGCCAAAAAAAGAGATGCCTCCCCGGGTCAGCTCAATTTGCAAAGGTTGAGGGACTTGTATCTTGATTCACAAGTTTGATCCCCATGCCAAGAGAACTAAGTTCAATATTTTAGTGGAGAATGGTAGCACATCAGCCTAGAATTCCGAAGGCTGCAGCGGCCCAAAGGGTTGGCTCCGGACTGACTTCTTGATCTTAAAAAAAAAAAGAAGAAAAAAAAGGCAAACAACAGAGTAATTCTTCAAATGTTGAAAATGTAAAATTTGAGTGTGTCAAACTTTTAATAGTTTGCAATAAAAGGTGAAAACTTATCACAGAAAAGGGAAAACTAAAACAATCAATTTGAAATAGAAGGGGTAGATGATGTAAGGATATGCTTTTTTACGCTTACACAGTTGGCAATGTCTGATTAAAAGATTAATAAATCAATTGTGCCTCTACGCAAACTAGTTGGCTGGCTATATTTTTCACTGTTATCCTTAAAGGATTCAGAACTGCATAAGTGAGACAGAACTGCATTCAACTCTCAACTTAGCATAGTCATCATTATTTTGTTTCTGGTACTTCTATTTTCCTAGCAATTCATTTCTGGTTCTTGATTGATATTTAACTGATCGCAGCTGACTGTGAAGATGAGATATATGTACCCTGCTCTTATTGTATTAAAAATTTGGTTCCTTCTCTAATAGCTGCATTGGTGGTAATCTGTAGGGAGTTGGCATCTTTGGTAGATCAATCCTGGAGGATGGAAATGGGAGGAGCACTTAAAAAAGAGCCTCTACCCATTTAATGCACTGAACTTATAATGTTCCCAACAATCATTTTCTGATGTAATATATGAGGTATGACTACTCTATGAGGCCTATTTATCATCATGCTCTTTCAGTTATCGCTGATCTTGACTGGGAAAATGATAAGAGTTCAGGAGTAGCAAATGTGAATAACAATCACAAGATAAAAAATGAATGATTTTGCATCATCGGGAAGGGCTTTGTTGTGAAAGTTAGGATATGCCTTTCATGTACTCTCTTACTGTATTTAGTGCCTATCTCTCTATCAGGCTATCACACAGTATTCTCCTCTAGTTGTGATAGAAGATATATCTACTGATTGGTAAAAAAAGATGTATCTACACAATACAATTTCTAATATTTAGTATTCTTTTTGTATTAGTTTATATCTAGAAAGTTAAACTCTGCAAGAAGAGATAATTATTGCAGCCTCACCATAATGTGAGGATTCAGCGATTTAATGAACATCTTAGCATGACTAATTTCAGTGTCCTCATTGATGGATGAAATGAGTTACTGTCTTCTTATACGATCTCGGACAATGCTCACCTTGAGCTAGCATTGGGGTTTTCCTAATGTCCACTTTTCACAAGAATACTAATTCAACTATTATTAGCAGTACAACGATCACACTTAATGATTATAGCCCATTTCTCTTATATTAGCATTACACATGGAAGGAAGGAGGTACTCATTTGTTCTTCTGTGTTAACTTTTGCTCACACCTCCATACTACATACTCCTAATTATTAGTTGTATATAATACCATTAAAGCTCTTACACTAGATGCACATAGGATCATATTAACACTCTTTCTTGAACATTTTTCCGTCTGGAGCTCCATCACCCAGTCTGAACTACAAATTGAGATAAAAGACTGAGATGATGACACATGAGTATGTTTACGCAACAACAGAAGAGAATGACTGTAATTCTATGCAGTTTTACTTTGCAATCAGCATCTGTTTTAATCCAGTACCCTCTATCGCTGGTGAAGCATCATAACTTGTACCACTTGGTGATACTTGTAAGGTCTGGAAGCTTTTTATCGACTACACCACTTGCTCCAGGGTCCAGAGTTGCAAATCTTTCAGGAAATACTCTAGTTTGATCCTTTAGTTGATTGTTCTCATCTTTAATCCTTGAGGATGAACTCTCCTTTGAAACATTTTTAGGATCTACAACAATATTAAAATCTAGGTGTGAAGTGATATCCTCCACCAAGGTAGTCTACCCCTTGTACCCTTAATAGGATGAGATTTTCAAGAATGTTATGCAAGGCTGTACCCCTAAGAGGTCATAGATAGCAATTTCATTCCAGGTTATACTTGGATTACTTTGTTATATGATGTTTTAAAGAGCTAGATATTTTAATAGGATGCTTACACTTCTTGTCGCATATTAGTTCTTTATTTATGTTCTTTCTTTGCGTTTACCTTAGTTGATTCCAACAATCATTTTTGACAATTAGTAATTACTTGCAGGTTTTTATGAGCCTTGAATTGCATACAATTCTTGGAGAGGTGCTCAAGGTTATTGATTTTGCTTCAATCCCTGACCATCGAGGTCTTCACATTTCATGTAACCTCTGTAATGTAATTAACAGTTTCTGTAATGAGTTTTGAGATGGTTTCTA</genome_strand>
        <mrna_strand>AAACACCAGATTTATTAATATTGGATGAGCCTCTTGCTGGTCTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGAAGGCTCGTGCAGATGTGGCAAAATTGTTAAAAGATCTGAAGAAGGAGCTAACTTTACTTGTTGTCAGCCATGACCTCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTTGGCATCTTTGGTAGATCAATCCTGGAGGATGGAAATGGGAGGAGCACTTAAAAAAGAGCCTCTACCCATTTAATGCACTGAACTTATAATGTTCCCAACAATCATTTTCTGATGTAATATATGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTATGAGCCTTGAATTGCATACAATTCTTGGAAAGGTGCTCAAGGTTATTGATTTTGCTTCAATCCCTGACCATCGAGGTCTTCACATTTCATGTAACCTCTGTAATGTAATTAACAGTTTCTGTAATGAGTTTTGAGATGGTTTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E352934" ref_strand="+" ref_description="SGN-E352934 [cTOS-11-L16]">
      <seq>aaacaccagatttattaatattggatgagcctcttgctggtcttgattggaaggctcgtgcagatgtggcaaaattgttaaaagatctgaagaaggagctaactttacttgttgtcagccatgacctcaaggagttggcatctttggtagatcaatcctggaggatggaaatgggaggagcacttaaaaaagagcctctacccatttaatgcactgaacttataatgttcccaacaatcattttctgatgtaatatatgaggtttttatgagccttgaattgcatacaattcttggaaaggtgctcaaggttattgattttgcttcaatccctgaccatcgaggtcttcacatttcatgtaacctctgtaatgtaattaacagtttctgtaatgagttttgagatggtttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="54671" stop="59552"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54971" g_stop="55015" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="45" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55016" i_stop="56206" i_length="1191">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.607" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56207" g_stop="56291" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="46" r_stop="130" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56292" i_stop="57537" i_length="1246">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57538" g_stop="57668" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="261" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57669" i_stop="59101" i_length="1433">
            <donor d_prob="0.744" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="59102" g_stop="59252" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="412" r_length="151" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E352934" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>412</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352934" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54971" e_stop="55015"/>
          <exon e_start="56207" e_stop="56291"/>
          <exon e_start="57538" e_stop="57668"/>
          <exon e_start="59102" e_stop="59252"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACACCAGATTTATTAATATTGGATGAGCCTCTTGCTGGTCTTGGTATGAAGAAACTTTCTATGATCTATTTCATTTTATTTTTTTGGTTTACCTTTTTTTTTTTCCTTTTGATGTTTTTCCCTTATTAGGTGTTTGATTCATCAGTTTGTTATTCTCCCACGTAAGTATGCTTTTAGTACAACAAGAGTTCTGGCTTTACAGAACAAGAATAGTTGTGATTTCTAGGTTAGGTTAAAGATGAAAAGGGTACAGAGGGAATTGCTATGCCTGCACAAGCATTTTACTTTTGTTATATTTGATGAACAACCCTTTTTCTCACCATGGTTATTGAAGTCTTGATTCCATCTTCCATATTCTGTAATCTGAGTAGTCTGTTCTTACAAAAGTCCTAACATGTTATCTTATGACAGAGACACCAAGATTGTCAACTCTTAGTAAACCCTATAGGCTGAGCTGCTAATAATGACAAACAAGTAAGAATAGGACGAGTAGTTAGCTTTGGTAATATAAAGAATAGAGTCAGAGGTTATGCTACCTGCTTTTACTTTATGAAGAATATGCTGAATGTAAATCTTTCTGCCATAGAATATTAATATTCTATGTTAGGTTGCAAATTCTCCAGAACTAAAGGTAACCAGGGTGGGATCTCTATATCTATTTTAGAGGAACTCTTCTTTGGCTTCACTTAAAAGCAATTTTTTTTGCTTCTTCTTGTAGAAGCTCAGAGTTCCTTGTAGGGCTATCAGATCTTATTCACCAAATATACATCGATGTACACATTGTTGTGTTAGAACACTCTTTCTGCTATCTGTGTACTAGCTCTCATATTTGCTTTTGCTGATATTTTACAAGGGCTATTTTGAAATTTTTTATATAGTTAATTCTTTACTATGGTTGGTACAAGTGAAGTTCAAGAGCTTGCCAATTAGATCATACCTCTCTTTGGATTGCATGTAGTATAATGGTAGTGAGTCTTGGTTGTATTAAGCAGCAGGACTGTTTTATGGAGTGAAGCTATTCCCACAAAGATTTTGAAAGCTTATTTTACTATTTCTTTTGTTTGGTATGATATAGCTAGCCTAGTCCTTTTTAAAAATGAAATACTTGTTTTTAAATATAGATTAGTTATTAGATGGACAATTTTTTTTTTTGTATTTTTTGGCTCCACTTCAACTATATTTGAGTACCTAATCTCAGTTTCTAAAAAAGTTCATTGTTTGTGAGGGAAATCAGATTGGAAGGCTCGTGCAGATGTGGCAAAATTGTTAAAAGATCTGAAGAAGGAGCTAACTTTACTTGTTGTCAGCCATGACCTCAAGTAAGTTCCTGATTAGGTCCATTTGTTATTGTTGTTTACATATGTTATTTTATTGGAAATGAATCATCATACTAGATGTCTAACATTATTCACTTGAGGTTTTTATTGATGTCGAGAAAATTTATCGACACTTATTGGTGACGTCGTGAAGGAAGTCAATTATCCATAACTTGTGAACTCTGGAAACTTTTCACAGACTCCCTGTCCCTTTTTCTTGATAACTGGAAAATCCATCGTTTGCCACTTCCAGACTTGGTGGATACTGGGATTTTTCCTCTACCCTACTCCACTAGGCTTGGATCATCAGTCCGGATTCAAACTCCTGCTCTGCTACTACCATACAAGCCGCATATACTACCTTGGCCACTTCCTTGGTCACATATGGTGGTCCCATAGTGATATCAGGTGTCATGATAGAGAAATATTTGTTTACTCTCCGTTTCAAATTTCATAACTTGTTTGCTTCTACAATTTTTTAAAATGTAAAAACACTGAATTTGTATTTTTTTGATAATGTGTATTTCTGTAAGAGAAACAGCCAAAAAAAGAGATGCCTCCCCGGGTCAGCTCAATTTGCAAAGGTTGAGGGACTTGTATCTTGATTCACAAGTTTGATCCCCATGCCAAGAGAACTAAGTTCAATATTTTAGTGGAGAATGGTAGCACATCAGCCTAGAATTCCGAAGGCTGCAGCGGCCCAAAGGGTTGGCTCCGGACTGACTTCTTGATCTTAAAAAAAAAAAGAAGAAAAAAAAGGCAAACAACAGAGTAATTCTTCAAATGTTGAAAATGTAAAATTTGAGTGTGTCAAACTTTTAATAGTTTGCAATAAAAGGTGAAAACTTATCACAGAAAAGGGAAAACTAAAACAATCAATTTGAAATAGAAGGGGTAGATGATGTAAGGATATGCTTTTTTACGCTTACACAGTTGGCAATGTCTGATTAAAAGATTAATAAATCAATTGTGCCTCTACGCAAACTAGTTGGCTGGCTATATTTTTCACTGTTATCCTTAAAGGATTCAGAACTGCATAAGTGAGACAGAACTGCATTCAACTCTCAACTTAGCATAGTCATCATTATTTTGTTTCTGGTACTTCTATTTTCCTAGCAATTCATTTCTGGTTCTTGATTGATATTTAACTGATCGCAGCTGACTGTGAAGATGAGATATATGTACCCTGCTCTTATTGTATTAAAAATTTGGTTCCTTCTCTAATAGCTGCATTGGTGGTAATCTGTAGGGAGTTGGCATCTTTGGTAGATCAATCCTGGAGGATGGAAATGGGAGGAGCACTTAAAAAAGAGCCTCTACCCATTTAATGCACTGAACTTATAATGTTCCCAACAATCATTTTCTGATGTAATATATGAGGTATGACTACTCTATGAGGCCTATTTATCATCATGCTCTTTCAGTTATCGCTGATCTTGACTGGGAAAATGATAAGAGTTCAGGAGTAGCAAATGTGAATAACAATCACAAGATAAAAAATGAATGATTTTGCATCATCGGGAAGGGCTTTGTTGTGAAAGTTAGGATATGCCTTTCATGTACTCTCTTACTGTATTTAGTGCCTATCTCTCTATCAGGCTATCACACAGTATTCTCCTCTAGTTGTGATAGAAGATATATCTACTGATTGGTAAAAAAAGATGTATCTACACAATACAATTTCTAATATTTAGTATTCTTTTTGTATTAGTTTATATCTAGAAAGTTAAACTCTGCAAGAAGAGATAATTATTGCAGCCTCACCATAATGTGAGGATTCAGCGATTTAATGAACATCTTAGCATGACTAATTTCAGTGTCCTCATTGATGGATGAAATGAGTTACTGTCTTCTTATACGATCTCGGACAATGCTCACCTTGAGCTAGCATTGGGGTTTTCCTAATGTCCACTTTTCACAAGAATACTAATTCAACTATTATTAGCAGTACAACGATCACACTTAATGATTATAGCCCATTTCTCTTATATTAGCATTACACATGGAAGGAAGGAGGTACTCATTTGTTCTTCTGTGTTAACTTTTGCTCACACCTCCATACTACATACTCCTAATTATTAGTTGTATATAATACCATTAAAGCTCTTACACTAGATGCACATAGGATCATATTAACACTCTTTCTTGAACATTTTTCCGTCTGGAGCTCCATCACCCAGTCTGAACTACAAATTGAGATAAAAGACTGAGATGATGACACATGAGTATGTTTACGCAACAACAGAAGAGAATGACTGTAATTCTATGCAGTTTTACTTTGCAATCAGCATCTGTTTTAATCCAGTACCCTCTATCGCTGGTGAAGCATCATAACTTGTACCACTTGGTGATACTTGTAAGGTCTGGAAGCTTTTTATCGACTACACCACTTGCTCCAGGGTCCAGAGTTGCAAATCTTTCAGGAAATACTCTAGTTTGATCCTTTAGTTGATTGTTCTCATCTTTAATCCTTGAGGATGAACTCTCCTTTGAAACATTTTTAGGATCTACAACAATATTAAAATCTAGGTGTGAAGTGATATCCTCCACCAAGGTAGTCTACCCCTTGTACCCTTAATAGGATGAGATTTTCAAGAATGTTATGCAAGGCTGTACCCCTAAGAGGTCATAGATAGCAATTTCATTCCAGGTTATACTTGGATTACTTTGTTATATGATGTTTTAAAGAGCTAGATATTTTAATAGGATGCTTACACTTCTTGTCGCATATTAGTTCTTTATTTATGTTCTTTCTTTGCGTTTACCTTAGTTGATTCCAACAATCATTTTTGACAATTAGTAATTACTTGCAGGTTTTTATGAGCCTTGAATTGCATACAATTCTTGGAGAGGTGCTCAAGGTTATTGATTTTGCTTCAATCCCTGACCATCGAGGTCTTCACATTTCATGTAACCTCTGTAATGTAATTAACAGTTTCTGTAATGAGTTTTGAGATGGTTTCT</genome_strand>
        <mrna_strand>AAACACCAGATTTATTAATATTGGATGAGCCTCTTGCTGGTCTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGAAGGCTCGTGCAGATGTGGCAAAATTGTTAAAAGATCTGAAGAAGGAGCTAACTTTACTTGTTGTCAGCCATGACCTCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTTGGCATCTTTGGTAGATCAATCCTGGAGGATGGAAATGGGAGGAGCACTTAAAAAAGAGCCTCTACCCATTTAATGCACTGAACTTATAATGTTCCCAACAATCATTTTCTGATGTAATATATGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTATGAGCCTTGAATTGCATACAATTCTTGGAAAGGTGCTCAAGGTTATTGATTTTGCTTCAATCCCTGACCATCGAGGTCTTCACATTTCATGTAACCTCTGTAATGTAATTAACAGTTTCTGTAATGAGTTTTGAGATGGTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E350453" ref_strand="+" ref_description="SGN-E350453 [cTOS-5-J12]">
      <seq>caccagatttattaatattggatgagcctcttgctggtcttgattggaaggctcgtgcagatgtggcaaaattgttaaaagatctgaagaaggagctaactttacttgttgtcagccatgacctcaaggagttggcatctttggtagatcaatcctggaggatggaaatgggaggagcacttaaaaaagagcctctacccatttaatgcactgaacttataatgttcccaacaatcattttctgatgtaatatatgaggtttttatgagccttgaattgcatacaattcttggaaaggtgctcaaggttattgattttgcttcaatccctgaccatcgaggtcttcacatttcatgtaacctctgtaatgtaattaacagtttctgtaatgagttttgagatggtttcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="54674" stop="59553"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54974" g_stop="55015" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="42" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55016" i_stop="56206" i_length="1191">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.607" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56207" g_stop="56291" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="127" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56292" i_stop="57537" i_length="1246">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57538" g_stop="57668" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="258" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57669" i_stop="59101" i_length="1433">
            <donor d_prob="0.744" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="59102" g_stop="59253" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="410" r_length="152" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E350453" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>410</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E350453" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54974" e_stop="55015"/>
          <exon e_start="56207" e_stop="56291"/>
          <exon e_start="57538" e_stop="57668"/>
          <exon e_start="59102" e_stop="59253"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACCAGATTTATTAATATTGGATGAGCCTCTTGCTGGTCTTGGTATGAAGAAACTTTCTATGATCTATTTCATTTTATTTTTTTGGTTTACCTTTTTTTTTTTCCTTTTGATGTTTTTCCCTTATTAGGTGTTTGATTCATCAGTTTGTTATTCTCCCACGTAAGTATGCTTTTAGTACAACAAGAGTTCTGGCTTTACAGAACAAGAATAGTTGTGATTTCTAGGTTAGGTTAAAGATGAAAAGGGTACAGAGGGAATTGCTATGCCTGCACAAGCATTTTACTTTTGTTATATTTGATGAACAACCCTTTTTCTCACCATGGTTATTGAAGTCTTGATTCCATCTTCCATATTCTGTAATCTGAGTAGTCTGTTCTTACAAAAGTCCTAACATGTTATCTTATGACAGAGACACCAAGATTGTCAACTCTTAGTAAACCCTATAGGCTGAGCTGCTAATAATGACAAACAAGTAAGAATAGGACGAGTAGTTAGCTTTGGTAATATAAAGAATAGAGTCAGAGGTTATGCTACCTGCTTTTACTTTATGAAGAATATGCTGAATGTAAATCTTTCTGCCATAGAATATTAATATTCTATGTTAGGTTGCAAATTCTCCAGAACTAAAGGTAACCAGGGTGGGATCTCTATATCTATTTTAGAGGAACTCTTCTTTGGCTTCACTTAAAAGCAATTTTTTTTGCTTCTTCTTGTAGAAGCTCAGAGTTCCTTGTAGGGCTATCAGATCTTATTCACCAAATATACATCGATGTACACATTGTTGTGTTAGAACACTCTTTCTGCTATCTGTGTACTAGCTCTCATATTTGCTTTTGCTGATATTTTACAAGGGCTATTTTGAAATTTTTTATATAGTTAATTCTTTACTATGGTTGGTACAAGTGAAGTTCAAGAGCTTGCCAATTAGATCATACCTCTCTTTGGATTGCATGTAGTATAATGGTAGTGAGTCTTGGTTGTATTAAGCAGCAGGACTGTTTTATGGAGTGAAGCTATTCCCACAAAGATTTTGAAAGCTTATTTTACTATTTCTTTTGTTTGGTATGATATAGCTAGCCTAGTCCTTTTTAAAAATGAAATACTTGTTTTTAAATATAGATTAGTTATTAGATGGACAATTTTTTTTTTTGTATTTTTTGGCTCCACTTCAACTATATTTGAGTACCTAATCTCAGTTTCTAAAAAAGTTCATTGTTTGTGAGGGAAATCAGATTGGAAGGCTCGTGCAGATGTGGCAAAATTGTTAAAAGATCTGAAGAAGGAGCTAACTTTACTTGTTGTCAGCCATGACCTCAAGTAAGTTCCTGATTAGGTCCATTTGTTATTGTTGTTTACATATGTTATTTTATTGGAAATGAATCATCATACTAGATGTCTAACATTATTCACTTGAGGTTTTTATTGATGTCGAGAAAATTTATCGACACTTATTGGTGACGTCGTGAAGGAAGTCAATTATCCATAACTTGTGAACTCTGGAAACTTTTCACAGACTCCCTGTCCCTTTTTCTTGATAACTGGAAAATCCATCGTTTGCCACTTCCAGACTTGGTGGATACTGGGATTTTTCCTCTACCCTACTCCACTAGGCTTGGATCATCAGTCCGGATTCAAACTCCTGCTCTGCTACTACCATACAAGCCGCATATACTACCTTGGCCACTTCCTTGGTCACATATGGTGGTCCCATAGTGATATCAGGTGTCATGATAGAGAAATATTTGTTTACTCTCCGTTTCAAATTTCATAACTTGTTTGCTTCTACAATTTTTTAAAATGTAAAAACACTGAATTTGTATTTTTTTGATAATGTGTATTTCTGTAAGAGAAACAGCCAAAAAAAGAGATGCCTCCCCGGGTCAGCTCAATTTGCAAAGGTTGAGGGACTTGTATCTTGATTCACAAGTTTGATCCCCATGCCAAGAGAACTAAGTTCAATATTTTAGTGGAGAATGGTAGCACATCAGCCTAGAATTCCGAAGGCTGCAGCGGCCCAAAGGGTTGGCTCCGGACTGACTTCTTGATCTTAAAAAAAAAAAGAAGAAAAAAAAGGCAAACAACAGAGTAATTCTTCAAATGTTGAAAATGTAAAATTTGAGTGTGTCAAACTTTTAATAGTTTGCAATAAAAGGTGAAAACTTATCACAGAAAAGGGAAAACTAAAACAATCAATTTGAAATAGAAGGGGTAGATGATGTAAGGATATGCTTTTTTACGCTTACACAGTTGGCAATGTCTGATTAAAAGATTAATAAATCAATTGTGCCTCTACGCAAACTAGTTGGCTGGCTATATTTTTCACTGTTATCCTTAAAGGATTCAGAACTGCATAAGTGAGACAGAACTGCATTCAACTCTCAACTTAGCATAGTCATCATTATTTTGTTTCTGGTACTTCTATTTTCCTAGCAATTCATTTCTGGTTCTTGATTGATATTTAACTGATCGCAGCTGACTGTGAAGATGAGATATATGTACCCTGCTCTTATTGTATTAAAAATTTGGTTCCTTCTCTAATAGCTGCATTGGTGGTAATCTGTAGGGAGTTGGCATCTTTGGTAGATCAATCCTGGAGGATGGAAATGGGAGGAGCACTTAAAAAAGAGCCTCTACCCATTTAATGCACTGAACTTATAATGTTCCCAACAATCATTTTCTGATGTAATATATGAGGTATGACTACTCTATGAGGCCTATTTATCATCATGCTCTTTCAGTTATCGCTGATCTTGACTGGGAAAATGATAAGAGTTCAGGAGTAGCAAATGTGAATAACAATCACAAGATAAAAAATGAATGATTTTGCATCATCGGGAAGGGCTTTGTTGTGAAAGTTAGGATATGCCTTTCATGTACTCTCTTACTGTATTTAGTGCCTATCTCTCTATCAGGCTATCACACAGTATTCTCCTCTAGTTGTGATAGAAGATATATCTACTGATTGGTAAAAAAAGATGTATCTACACAATACAATTTCTAATATTTAGTATTCTTTTTGTATTAGTTTATATCTAGAAAGTTAAACTCTGCAAGAAGAGATAATTATTGCAGCCTCACCATAATGTGAGGATTCAGCGATTTAATGAACATCTTAGCATGACTAATTTCAGTGTCCTCATTGATGGATGAAATGAGTTACTGTCTTCTTATACGATCTCGGACAATGCTCACCTTGAGCTAGCATTGGGGTTTTCCTAATGTCCACTTTTCACAAGAATACTAATTCAACTATTATTAGCAGTACAACGATCACACTTAATGATTATAGCCCATTTCTCTTATATTAGCATTACACATGGAAGGAAGGAGGTACTCATTTGTTCTTCTGTGTTAACTTTTGCTCACACCTCCATACTACATACTCCTAATTATTAGTTGTATATAATACCATTAAAGCTCTTACACTAGATGCACATAGGATCATATTAACACTCTTTCTTGAACATTTTTCCGTCTGGAGCTCCATCACCCAGTCTGAACTACAAATTGAGATAAAAGACTGAGATGATGACACATGAGTATGTTTACGCAACAACAGAAGAGAATGACTGTAATTCTATGCAGTTTTACTTTGCAATCAGCATCTGTTTTAATCCAGTACCCTCTATCGCTGGTGAAGCATCATAACTTGTACCACTTGGTGATACTTGTAAGGTCTGGAAGCTTTTTATCGACTACACCACTTGCTCCAGGGTCCAGAGTTGCAAATCTTTCAGGAAATACTCTAGTTTGATCCTTTAGTTGATTGTTCTCATCTTTAATCCTTGAGGATGAACTCTCCTTTGAAACATTTTTAGGATCTACAACAATATTAAAATCTAGGTGTGAAGTGATATCCTCCACCAAGGTAGTCTACCCCTTGTACCCTTAATAGGATGAGATTTTCAAGAATGTTATGCAAGGCTGTACCCCTAAGAGGTCATAGATAGCAATTTCATTCCAGGTTATACTTGGATTACTTTGTTATATGATGTTTTAAAGAGCTAGATATTTTAATAGGATGCTTACACTTCTTGTCGCATATTAGTTCTTTATTTATGTTCTTTCTTTGCGTTTACCTTAGTTGATTCCAACAATCATTTTTGACAATTAGTAATTACTTGCAGGTTTTTATGAGCCTTGAATTGCATACAATTCTTGGAGAGGTGCTCAAGGTTATTGATTTTGCTTCAATCCCTGACCATCGAGGTCTTCACATTTCATGTAACCTCTGTAATGTAATTAACAGTTTCTGTAATGAGTTTTGAGATGGTTTCTA</genome_strand>
        <mrna_strand>CACCAGATTTATTAATATTGGATGAGCCTCTTGCTGGTCTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGAAGGCTCGTGCAGATGTGGCAAAATTGTTAAAAGATCTGAAGAAGGAGCTAACTTTACTTGTTGTCAGCCATGACCTCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTTGGCATCTTTGGTAGATCAATCCTGGAGGATGGAAATGGGAGGAGCACTTAAAAAAGAGCCTCTACCCATTTAATGCACTGAACTTATAATGTTCCCAACAATCATTTTCTGATGTAATATATGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTATGAGCCTTGAATTGCATACAATTCTTGGAAAGGTGCTCAAGGTTATTGATTTTGCTTCAATCCCTGACCATCGAGGTCTTCACATTTCATGTAACCTCTGTAATGTAATTAACAGTTTCTGTAATGAGTTTTGAGATGGTTTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E545825" ref_strand="+" ref_description="SGN-E545825 [TUS-68-N24]">
      <seq>gttgctatgactgcacaagcattttacttttgttatatttgatgaacaacccttttcctctgcatggttattgaagtcttgattccatcttccatattctgtaatctgagtagtctgttcttacaaaagtcctaacttgttatcttatgacagagacaccaagattgtcaactctataggctgagctgttaataatgacaaacaagtaagaataggacgagtagttagctttggtaatataaagaatagagtcacaggttatgctacctgcttttactttatgaagaatatgctgaaatatgtaaatctttctgccgtagaatattaatattctatgttaggttgcaaattctccagaactaaaggtaaccagggtgggatctctatatctattttagaggaactcttctttggcttcacttaaaagcaatttttatttattcttcttgtagaagctcagagttccttgtagggctatcagatcttattcaccaaatatacatcgatgtacacattgttgtgttagaacactctttctgctaactgtgtactagctctcatatttgcttttgctgatattttacaagggctattttgaaatcttttatatagttaattctttgctatggttggtacaagtgaagttcaagagcttgccaattagatcatacctctctttggattgcatgttgtataatggtagtgaggcttggttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="54932" stop="56255"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55231" g_stop="55955" g_length="725"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="717" r_length="717" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E545825" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>725</cumulative_length_of_scored_exons>
        <coverage percentage="1.011" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E545825" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55231" e_stop="55955"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGCTATGCCTGCACAAGCATTTTACTTTTGTTATATTTGATGAACAACCCTTTTTCTCACCATGGTTATTGAAGTCTTGATTCCATCTTCCATATTCTGTAATCTGAGTAGTCTGTTCTTACAAAAGTCCTAACATGTTATCTTATGACAGAGACACCAAGATTGTCAACTCTTAGTAAACCCTATAGGCTGAGCTGCTAATAATGACAAACAAGTAAGAATAGGACGAGTAGTTAGCTTTGGTAATATAAAGAATAGAGTCAGAGGTTATGCTACCTGCTTTTACTTTATGAAGAATATGCTG--A-ATGTAAATCTTTCTGCCATAGAATATTAATATTCTATGTTAGGTTGCAAATTCTCCAGAACTAAAGGTAACCAGGGTGGGATCTCTATATCTATTTTAGAGGAACTCTTCTTTGGCTTCACTTAAAAGCAATTTTTTTTGCTTCTTCTTGTAGAAGCTCAGAGTTCCTTGTAGGGCTATCAGATCTTATTCACCAAATATACATCGATGTACACATTGTTGTGTTAGAACACTCTTTCTGCTATCTGTGTACTAGCTCTCATATTTGCTTTTGCTGATATTTTACAAGGGCTATTTTGAAATTTTTTATATAGTTAATTCTTTACTATGGTTGGTACAAGTGAAGTTCAAGAGCTTGCCAATTAGATCATACCTCTCTTTGGATTGCATGTAGTATAATGGTAGTGAGTCTTGGTTGT</genome_strand>
        <mrna_strand>GTTGCTATGACTGCACAAGCATTTTACTTTTGTTATATTTGATGAACAACCCTTTTCCTCTGCATGGTTATTGAAGTCTTGATTCCATCTTCCATATTCTGTAATCTGAGTAGTCTGTTCTTACAAAAGTCCTAACTTGTTATCTTATGACAGAGACACCAAGATTGTCAA--C----T-----CTATAGGCTGAGCTGTTAATAATGACAAACAAGTAAGAATAGGACGAGTAGTTAGCTTTGGTAATATAAAGAATAGAGTCACAGGTTATGCTACCTGCTTTTACTTTATGAAGAATATGCTGAAATATGTAAATCTTTCTGCCGTAGAATATTAATATTCTATGTTAGGTTGCAAATTCTCCAGAACTAAAGGTAACCAGGGTGGGATCTCTATATCTATTTTAGAGGAACTCTTCTTTGGCTTCACTTAAAAGCAATTTTTATTTATTCTTCTTGTAGAAGCTCAGAGTTCCTTGTAGGGCTATCAGATCTTATTCACCAAATATACATCGATGTACACATTGTTGTGTTAGAACACTCTTTCTGCTAACTGTGTACTAGCTCTCATATTTGCTTTTGCTGATATTTTACAAGGGCTATTTTGAAATCTTTTATATAGTTAATTCTTTGCTATGGTTGGTACAAGTGAAGTTCAAGAGCTTGCCAATTAGATCATACCTCTCTTTGGATTGCATGTTGTATAATGGTAGTGAGGCTTGGTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E354704" ref_strand="+" ref_description="SGN-E354704 [cLHT-5-D19]">
      <seq>ttgctatgactgcacaagcattttacttttgttatatttgatgaacaacccttttcctctgcatggttattgaagtcttgattccatcttccatattctgtaatctgagtagtctgttcttacaaaagtcctaacttgttatcttatgacagagacaccaagattgtcaactctataggctgagctgttaataatgacaaacaagtaagaataggacgagtagttagctttggtaatataaagaatagagtcacaggttatgctacctgcttttactttatgaagaatatgctgaaatatgtaaatctttctgccgtagaatattaatattctatgttaggttgcaaattctccagaactaaaggtaaccagggtgggatctctatatctatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="54932" stop="55934"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55232" g_stop="55634" g_length="403"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="395" r_length="395" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E354704" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>403</cumulative_length_of_scored_exons>
        <coverage percentage="1.020" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E354704" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55232" e_stop="55634"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCTATGCCTGCACAAGCATTTTACTTTTGTTATATTTGATGAACAACCCTTTTTCTCACCATGGTTATTGAAGTCTTGATTCCATCTTCCATATTCTGTAATCTGAGTAGTCTGTTCTTACAAAAGTCCTAACATGTTATCTTATGACAGAGACACCAAGATTGTCAACTCTTAGTAAACCCTATAGGCTGAGCTGCTAATAATGACAAACAAGTAAGAATAGGACGAGTAGTTAGCTTTGGTAATATAAAGAATAGAGTCAGAGGTTATGCTACCTGCTTTTACTTTATGAAGAATATGCTG--A-ATGTAAATCTTTCTGCCATAGAATATTAATATTCTATGTTAGGTTGCAAATTCTCCAGAACTAAAGGTAACCAGGGTGGGATCTCTATATCTATTTT</genome_strand>
        <mrna_strand>TTGCTATGACTGCACAAGCATTTTACTTTTGTTATATTTGATGAACAACCCTTTTCCTCTGCATGGTTATTGAAGTCTTGATTCCATCTTCCATATTCTGTAATCTGAGTAGTCTGTTCTTACAAAAGTCCTAACTTGTTATCTTATGACAGAGACACCAAGATTGTCAA--C----T-----CTATAGGCTGAGCTGTTAATAATGACAAACAAGTAAGAATAGGACGAGTAGTTAGCTTTGGTAATATAAAGAATAGAGTCACAGGTTATGCTACCTGCTTTTACTTTATGAAGAATATGCTGAAATATGTAAATCTTTCTGCCGTAGAATATTAATATTCTATGTTAGGTTGCAAATTCTCCAGAACTAAAGGTAACCAGGGTGGGATCTCTATATCTATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E545824" ref_strand="+" ref_description="SGN-E545824 [TUS-68-N24](-)">
      <seq>aggactgttttattgagtgaagctattcccacaaagattttgaaagcttattttactatttctttgttttggtatgatatagctagcctagtccttttaaaaaatgaaatacttgtttttaaatatagattagttattagatggacaattttttttttttgtatttatggctccacttcaactatatttgagtacctaacctcagtttctaaaaaagttcattgtttgtgagggaaatcagattggaaggctcgtgcagatgtggcaaaattgttaaaagatctgaagaaggagctaactttacttgttgtcagccatgacctcaaggagttggcatctttggtagatcaatcttggaggatggaaatgggaggagcacttaaaagagagcctctacccatttaatgcacggaacttataatgttcccaacaatcattttctgatgtaatatatgaggtttttatgagccttgaattgcatacaattcttggagaggtgctcaaggttattgattttgcttcaatccctgaccatcgaggtcttcacatttcatgtaacctctgtaatgtaattaacagtttctgtaatgagttttgagatagtttctaattttctgtacacttagttcgccgtttaaaccctcattaaagtttgatgggtctgcagcatttctttgtccttgtctctcaccaaaagttttgaatgttgattggaattttgttcaaaatatgtatagtagtatgcatgtattggtaaattaaattacactgttgacatatatgaatagtagcttttctagttgtgttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="55666" stop="59759"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55966" g_stop="56291" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="326" r_length="326" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="56292" i_stop="57537" i_length="1246">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57538" g_stop="57668" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="457" r_length="131" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57669" i_stop="59101" i_length="1433">
            <donor d_prob="0.744" d_score="0.98"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59102" g_stop="59462" g_length="361"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="817" r_length="360" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E545824" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>818</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E545824" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55966" e_stop="56291"/>
          <exon e_start="57538" e_stop="57668"/>
          <exon e_start="59102" e_stop="59462"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGACTGTTTTATGGAGTGAAGCTATTCCCACAAAGATTTTGAAAGCTTATTTTACTATTTCTTTTGTTTGGTATGATATAGCTAGCCTAGTCCTTTTTAAAAATGAAATACTTGTTTTTAAATATAGATTAGTTATTAGATGGACAA-TTTTTTTTTTTGTATTTTTTGGCTCCACTTCAACTATATTTGAGTACCTAATCTCAGTTTCTAAAAAAGTTCATTGTTTGTGAGGGAAATCAGATTGGAAGGCTCGTGCAGATGTGGCAAAATTGTTAAAAGATCTGAAGAAGGAGCTAACTTTACTTGTTGTCAGCCATGACCTCAAGTAAGTTCCTGATTAGGTCCATTTGTTATTGTTGTTTACATATGTTATTTTATTGGAAATGAATCATCATACTAGATGTCTAACATTATTCACTTGAGGTTTTTATTGATGTCGAGAAAATTTATCGACACTTATTGGTGACGTCGTGAAGGAAGTCAATTATCCATAACTTGTGAACTCTGGAAACTTTTCACAGACTCCCTGTCCCTTTTTCTTGATAACTGGAAAATCCATCGTTTGCCACTTCCAGACTTGGTGGATACTGGGATTTTTCCTCTACCCTACTCCACTAGGCTTGGATCATCAGTCCGGATTCAAACTCCTGCTCTGCTACTACCATACAAGCCGCATATACTACCTTGGCCACTTCCTTGGTCACATATGGTGGTCCCATAGTGATATCAGGTGTCATGATAGAGAAATATTTGTTTACTCTCCGTTTCAAATTTCATAACTTGTTTGCTTCTACAATTTTTTAAAATGTAAAAACACTGAATTTGTATTTTTTTGATAATGTGTATTTCTGTAAGAGAAACAGCCAAAAAAAGAGATGCCTCCCCGGGTCAGCTCAATTTGCAAAGGTTGAGGGACTTGTATCTTGATTCACAAGTTTGATCCCCATGCCAAGAGAACTAAGTTCAATATTTTAGTGGAGAATGGTAGCACATCAGCCTAGAATTCCGAAGGCTGCAGCGGCCCAAAGGGTTGGCTCCGGACTGACTTCTTGATCTTAAAAAAAAAAAGAAGAAAAAAAAGGCAAACAACAGAGTAATTCTTCAAATGTTGAAAATGTAAAATTTGAGTGTGTCAAACTTTTAATAGTTTGCAATAAAAGGTGAAAACTTATCACAGAAAAGGGAAAACTAAAACAATCAATTTGAAATAGAAGGGGTAGATGATGTAAGGATATGCTTTTTTACGCTTACACAGTTGGCAATGTCTGATTAAAAGATTAATAAATCAATTGTGCCTCTACGCAAACTAGTTGGCTGGCTATATTTTTCACTGTTATCCTTAAAGGATTCAGAACTGCATAAGTGAGACAGAACTGCATTCAACTCTCAACTTAGCATAGTCATCATTATTTTGTTTCTGGTACTTCTATTTTCCTAGCAATTCATTTCTGGTTCTTGATTGATATTTAACTGATCGCAGCTGACTGTGAAGATGAGATATATGTACCCTGCTCTTATTGTATTAAAAATTTGGTTCCTTCTCTAATAGCTGCATTGGTGGTAATCTGTAGGGAGTTGGCATCTTTGGTAGATCAATCCTGGAGGATGGAAATGGGAGGAGCACTTAAAAAAGAGCCTCTACCCATTTAATGCACTGAACTTATAATGTTCCCAACAATCATTTTCTGATGTAATATATGAGGTATGACTACTCTATGAGGCCTATTTATCATCATGCTCTTTCAGTTATCGCTGATCTTGACTGGGAAAATGATAAGAGTTCAGGAGTAGCAAATGTGAATAACAATCACAAGATAAAAAATGAATGATTTTGCATCATCGGGAAGGGCTTTGTTGTGAAAGTTAGGATATGCCTTTCATGTACTCTCTTACTGTATTTAGTGCCTATCTCTCTATCAGGCTATCACACAGTATTCTCCTCTAGTTGTGATAGAAGATATATCTACTGATTGGTAAAAAAAGATGTATCTACACAATACAATTTCTAATATTTAGTATTCTTTTTGTATTAGTTTATATCTAGAAAGTTAAACTCTGCAAGAAGAGATAATTATTGCAGCCTCACCATAATGTGAGGATTCAGCGATTTAATGAACATCTTAGCATGACTAATTTCAGTGTCCTCATTGATGGATGAAATGAGTTACTGTCTTCTTATACGATCTCGGACAATGCTCACCTTGAGCTAGCATTGGGGTTTTCCTAATGTCCACTTTTCACAAGAATACTAATTCAACTATTATTAGCAGTACAACGATCACACTTAATGATTATAGCCCATTTCTCTTATATTAGCATTACACATGGAAGGAAGGAGGTACTCATTTGTTCTTCTGTGTTAACTTTTGCTCACACCTCCATACTACATACTCCTAATTATTAGTTGTATATAATACCATTAAAGCTCTTACACTAGATGCACATAGGATCATATTAACACTCTTTCTTGAACATTTTTCCGTCTGGAGCTCCATCACCCAGTCTGAACTACAAATTGAGATAAAAGACTGAGATGATGACACATGAGTATGTTTACGCAACAACAGAAGAGAATGACTGTAATTCTATGCAGTTTTACTTTGCAATCAGCATCTGTTTTAATCCAGTACCCTCTATCGCTGGTGAAGCATCATAACTTGTACCACTTGGTGATACTTGTAAGGTCTGGAAGCTTTTTATCGACTACACCACTTGCTCCAGGGTCCAGAGTTGCAAATCTTTCAGGAAATACTCTAGTTTGATCCTTTAGTTGATTGTTCTCATCTTTAATCCTTGAGGATGAACTCTCCTTTGAAACATTTTTAGGATCTACAACAATATTAAAATCTAGGTGTGAAGTGATATCCTCCACCAAGGTAGTCTACCCCTTGTACCCTTAATAGGATGAGATTTTCAAGAATGTTATGCAAGGCTGTACCCCTAAGAGGTCATAGATAGCAATTTCATTCCAGGTTATACTTGGATTACTTTGTTATATGATGTTTTAAAGAGCTAGATATTTTAATAGGATGCTTACACTTCTTGTCGCATATTAGTTCTTTATTTATGTTCTTTCTTTGCGTTTACCTTAGTTGATTCCAACAATCATTTTTGACAATTAGTAATTACTTGCAGGTTTTTATGAGCCTTGAATTGCATACAATTCTTGGAGAGGTGCTCAAGGTTATTGATTTTGCTTCAATCCCTGACCATCGAGGTCTTCACATTTCATGTAACCTCTGTAATGTAATTAACAGTTTCTGTAATGAGTTTTGAGATGGTTTCTAATTTTCTGTACACTTAGTTCGCCGTTTAAACTCTCATTAAAGTTTGAT-GGTCTGCAGCATTTTCTTTGTCCTCGTCTCTCACCAAAAGTTTTTGAATGTTTATTGGAATTTTGTTCAAAATATGTATGGTAGTATGTATGTATTGGTAAATTAAATTACACTGTTGACATATATGAATAGTAGCTTTTCTAGTTGTGTTAAAAGAATGA</genome_strand>
        <mrna_strand>AGGACTGTTTTATTGAGTGAAGCTATTCCCACAAAGATTTTGAAAGCTTATTTTACTATTTCTTTGTTTTGGTATGATATAGCTAGCCTAGTCCTTTTAAAAAATGAAATACTTGTTTTTAAATATAGATTAGTTATTAGATGGACAATTTTTTTTTTTTGTA-TTTATGGCTCCACTTCAACTATATTTGAGTACCTAACCTCAGTTTCTAAAAAAGTTCATTGTTTGTGAGGGAAATCAGATTGGAAGGCTCGTGCAGATGTGGCAAAATTGTTAAAAGATCTGAAGAAGGAGCTAACTTTACTTGTTGTCAGCCATGACCTCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTTGGCATCTTTGGTAGATCAATCTTGGAGGATGGAAATGGGAGGAGCACTTAAAAGAGAGCCTCTACCCATTTAATGCACGGAACTTATAATGTTCCCAACAATCATTTTCTGATGTAATATATGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTATGAGCCTTGAATTGCATACAATTCTTGGAGAGGTGCTCAAGGTTATTGATTTTGCTTCAATCCCTGACCATCGAGGTCTTCACATTTCATGTAACCTCTGTAATGTAATTAACAGTTTCTGTAATGAGTTTTGAGATAGTTTCTAATTTTCTGTACACTTAGTTCGCCGTTTAAACCCTCATTAAAGTTTGATGGGTCTGCAGCA-TTTCTTTGTCCTTGTCTCTCACCAAAAG-TTTTGAATGTTGATTGGAATTTTGTTCAAAATATGTATAGTAGTATGCATGTATTGGTAAATTAAATTACACTGTTGACATATATGAATAGTAGCTTTTCTAGTTGTGTTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E343233" ref_strand="+" ref_description="SGN-E343233 [cTOF-17-P18]">
      <seq>tcaacaaattgaggatgagactgtcaagttcgcacactatttgggtatcaaagttgtttctattgttggtgggcagtccatagaggagcaaggttttaggattaggcaaggttgtgaagttgtgattgcaacccctgggcgacttcttgattgcttggagagacgttattgtgttctgaaccagtgtaattatgttgttcttgatgaagcggaccgtatgattgacatgggttttgagcctcaagttgttggtgtactggatgctatgccttcaagtaatatgaaaccggagaatgaggatgaagagcttgatgagaagagaatttatcgaaccacttatatgttcagtgctaccatgccacctgctgtggagcggctggctagaaaatacttgagaaatcctgttgttgtgactattggcactgctggaaagactactgacctcatcactcagcacgtgtttatggtaaaggaatcagagaaaatgtataaactgcagaaattgctggatgagcttggagataagacagctattgtgttcatcaacactaagaagcaggctgattttgttgccaagaatctggataaaaacggctacagggtaaccacactgcatggtggaaagtctcaggagcaaagagaaatcagccttgaaggatttaggaccaagaagtacaatgtgttagttgctactgacgttgctggtcgtggtattgatatacctgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="61180" stop="62507"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61480" g_stop="62207" g_length="728"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="728" r_length="728" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E343233" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>728</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E343233" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61480" e_stop="62207"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAACAAATTGAGGATGAGACCGTCAAGTTTGCACACTATTTGGGTATCAAAGTTGTTTCTATTGTTGGTGGGCAGTCCATAGAAGAGCAAGGTTTTAGGATTAGGCAAGGCTGTGAAGTTGTGATTGCGACCCCTGGGCGACTTCTCGATTGCTTGGAGAGACGTTATTGTGTTCTGAACCAGTGTAATTATGTTGTTCTCGATGAGGCTGACCGGATGATTGATATGGGTTTTGGACCTCAAGTTGTTGGTGTACTGGATGCAATGCCTTCAAGTAATATGAAACCAAAGAACGAGGATGAAAAGCTTGATGAGAATAAGATTTATCGAACCACTTATATGTTCAGTGCTACCATGCCACCTGCCGTAGAGCGGCTGGCTAGAAATTACTTAAGAAATCCTGCTGTCGTGACTATTGGCACTGCTGGAAAGGTTACTGACCTCATTACTCAGCATGTCTTCATGGTAAAGGAATCTGAGAAAATGTTTAAGTTGCAGAGGTTTCTGGATGAGCTTGGAGATAAGACTGCTATTGTGTTCATCAACTCTAGAAAGCGGGTTAACACTGTTGCCAAGCATCTGGATAAAGCTGGCTATAGGGTAACCACACTGCATGGTGGGAAATCACAGGAGCAGAGGGAAATCAGCCTTGAAGGATTTAGGACAAAGAAGTATAATGTGTTAGTTGCTAGTGATGTTGCCGGTCGTGGAATTGATATACCTGATG</genome_strand>
        <mrna_strand>TCAACAAATTGAGGATGAGACTGTCAAGTTCGCACACTATTTGGGTATCAAAGTTGTTTCTATTGTTGGTGGGCAGTCCATAGAGGAGCAAGGTTTTAGGATTAGGCAAGGTTGTGAAGTTGTGATTGCAACCCCTGGGCGACTTCTTGATTGCTTGGAGAGACGTTATTGTGTTCTGAACCAGTGTAATTATGTTGTTCTTGATGAAGCGGACCGTATGATTGACATGGGTTTTGAGCCTCAAGTTGTTGGTGTACTGGATGCTATGCCTTCAAGTAATATGAAACCGGAGAATGAGGATGAAGAGCTTGATGAGAAGAGAATTTATCGAACCACTTATATGTTCAGTGCTACCATGCCACCTGCTGTGGAGCGGCTGGCTAGAAAATACTTGAGAAATCCTGTTGTTGTGACTATTGGCACTGCTGGAAAGACTACTGACCTCATCACTCAGCACGTGTTTATGGTAAAGGAATCAGAGAAAATGTATAAACTGCAGAAATTGCTGGATGAGCTTGGAGATAAGACAGCTATTGTGTTCATCAACACTAAGAAGCAGGCTGATTTTGTTGCCAAGAATCTGGATAAAAACGGCTACAGGGTAACCACACTGCATGGTGGAAAGTCTCAGGAGCAAAGAGAAATCAGCCTTGAAGGATTTAGGACCAAGAAGTACAATGTGTTAGTTGCTACTGACGTTGCTGGTCGTGGTATTGATATACCTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E729311" ref_strand="+" ref_description="SGN-E729311 [LA20CF12]">
      <seq>gcctctttttatttatttattactataacctgcaaggtagacccatctagtttccattgatggatcccaaacaggctaaccacaacaatattaagcctactcatgatcagataaaagagttgcagattttgaaaaatgatgaaacgaacaaggtggctgctcccaaaagaaaagataggcatacaaaagttgaaggtagagggaggagaatacgtatgccggcgctctgtgcagcaagaatcttccagcttacgcgcgaattgggtcataaatctgatggtgagacaattcagtggctgctgcagcaagccgagccttcgattattgctgctactggcacagggacaatacctgcctcggctttagctgcagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="69121" stop="70094"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69421" g_stop="69794" g_length="374"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="374" r_length="374" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E729311" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>374</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E729311" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69421" e_stop="69794"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTCTTTTTATTTATTTATTACTATAACCTGCAAGGTAGACCCATCTAGTTTCCATTGATGGATCCCAAACAGGCTAACCACAACAATATTAAGCCTACTCATGATCAGATAAAAGAGTTGCAGATTTTGAAAAATGATGAAACGAACAAGGTGGCTGCTCCCAAAAGAAAAGATAGGCATACAAAAGTTGAAGGTAGAGGGAGGAGAATACGTATGCCGGCGCTCTGTGCAGCAAGAATCTTCCAGCTTACGCGCGAATTGGGTCATAAATCTGATGGTGAGACAATTCAGTGGCTGCTGCAGCAAGCCGAGCCTTCGATTATTGCTGCTACTGGCACAGGGACAATACCTGCCTCGGCTTTAGCTGCAGCA</genome_strand>
        <mrna_strand>GCCTCTTTTTATTTATTTATTACTATAACCTGCAAGGTAGACCCATCTAGTTTCCATTGATGGATCCCAAACAGGCTAACCACAACAATATTAAGCCTACTCATGATCAGATAAAAGAGTTGCAGATTTTGAAAAATGATGAAACGAACAAGGTGGCTGCTCCCAAAAGAAAAGATAGGCATACAAAAGTTGAAGGTAGAGGGAGGAGAATACGTATGCCGGCGCTCTGTGCAGCAAGAATCTTCCAGCTTACGCGCGAATTGGGTCATAAATCTGATGGTGAGACAATTCAGTGGCTGCTGCAGCAAGCCGAGCCTTCGATTATTGCTGCTACTGGCACAGGGACAATACCTGCCTCGGCTTTAGCTGCAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E729308" ref_strand="+" ref_description="SGN-E729308 [LA20CF08]">
      <seq>tattactataacctgcaaggtagacccatctagtttccattgatggatcccaaacaggctaaccacaacaatattaagcctactcatgatcagataaaagagttgcagattttgaaaaatgatgaaacgaacaaggtggctgctcccaaaagaaaagataggcatacaaaagttgaaggtagagggaggagaatacgtatgccggcgctctgtgcagcaagaatcttccagcttacgcgcgaattgggtcataaatctgatggtgagacaattcagtggctgctgcagcaagccgagccttcgattattgctgctactggcacagggacaatacctgcctcggctttagctgcagcagcctctcgttttcaacaggggatctctgtatcagctggtttaatgattgaatcgggggcgaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="69138" stop="70158"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69438" g_stop="69858" g_length="421"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="421" r_length="421" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E729308" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>421</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E729308" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69438" e_stop="69858"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTACTATAACCTGCAAGGTAGACCCATCTAGTTTCCATTGATGGATCCCAAACAGGCTAACCACAACAATATTAAGCCTACTCATGATCAGATAAAAGAGTTGCAGATTTTGAAAAATGATGAAACGAACAAGGTGGCTGCTCCCAAAAGAAAAGATAGGCATACAAAAGTTGAAGGTAGAGGGAGGAGAATACGTATGCCGGCGCTCTGTGCAGCAAGAATCTTCCAGCTTACGCGCGAATTGGGTCATAAATCTGATGGTGAGACAATTCAGTGGCTGCTGCAGCAAGCCGAGCCTTCGATTATTGCTGCTACTGGCACAGGGACAATACCTGCCTCGGCTTTAGCTGCAGCAGCCTCTGTTTCTCAACAGGGGATCTCTGTATCAGCTGGTTTAATGATTGAATCGGGGGCGAATA</genome_strand>
        <mrna_strand>TATTACTATAACCTGCAAGGTAGACCCATCTAGTTTCCATTGATGGATCCCAAACAGGCTAACCACAACAATATTAAGCCTACTCATGATCAGATAAAAGAGTTGCAGATTTTGAAAAATGATGAAACGAACAAGGTGGCTGCTCCCAAAAGAAAAGATAGGCATACAAAAGTTGAAGGTAGAGGGAGGAGAATACGTATGCCGGCGCTCTGTGCAGCAAGAATCTTCCAGCTTACGCGCGAATTGGGTCATAAATCTGATGGTGAGACAATTCAGTGGCTGCTGCAGCAAGCCGAGCCTTCGATTATTGCTGCTACTGGCACAGGGACAATACCTGCCTCGGCTTTAGCTGCAGCAGCCTCTCGTTTTCAACAGGGGATCTCTGTATCAGCTGGTTTAATGATTGAATCGGGGGCGAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E699579" ref_strand="+" ref_description="SGN-E699579 [FA10CC11]">
      <seq>ggtagacccatctagtttccattgatggatcccaaacaggctaaccacaacaatattaagcctactcatgatcagataaaagagttgcagattttgaaaaatgatgaaacgaacaaggtggctgctcccaaaagaaaagataggcatacaaaagttgaaggtagagggaggagaatacgtatgccggcgctctgtgcagcaagaatcttccagcttacgcgcgaattgggtcataaatctgatggtgagacaattcagtggctgctgcagcaagccgagccttcgattattgctgctactggcacagggacaatacctgcctcggctttagctgcagcagcctctgtttctcaacaggggatctctgtatcagctggtttaatgattgaatcgggggcgaatatcgcggggtctggtagcagtagaagtagtaatagtaggaccaattggccaatgatctgtgggaattttggaagaccccatttggctacagcaggaatgtggcctgcccctgcccctgttgtcactagttttgggtttcaatcctcatctgctccatcaagcgcgagtttaggtagtgatagttcaaattattacttacagaaaattgggtttcctggatttgatctgcctgcagctacaagtatgaatccgatgtgttttacttcaattcttggtggaagtaatcagcaactgccaggattggaactgggattatctcaacagggtcatttacgggttttgaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="69156" stop="70503"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69456" g_stop="70203" g_length="748"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="748" r_length="748" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E699579" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>748</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E699579" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69456" e_stop="70203"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTAGACCCATCTAGTTTCCATTGATGGATCCCAAACAGGCTAACCACAACAATATTAAGCCTACTCATGATCAGATAAAAGAGTTGCAGATTTTGAAAAATGATGAAACGAACAAGGTGGCTGCTCCCAAAAGAAAAGATAGGCATACAAAAGTTGAAGGTAGAGGGAGGAGAATACGTATGCCGGCGCTCTGTGCAGCAAGAATCTTCCAGCTTACGCGCGAATTGGGTCATAAATCTGATGGTGAGACAATTCAGTGGCTGCTGCAGCAAGCCGAGCCTTCGATTATTGCTGCTACTGGCACAGGGACAATACCTGCCTCGGCTTTAGCTGCAGCAGCCTCTGTTTCTCAACAGGGGATCTCTGTATCAGCTGGTTTAATGATTGAATCGGGGGCGAATATCGCGGGGTCTGGTAGCAGTAGAAGTAGTAATAGTAGGACCAATTGGCCAATGATCTGTGGGAATTTTGGAAGACCCCATTTGGCTACAGCAGGAATGTGGCCTGCCCCTGCCCCTGTTGTCACTAGTTTTGGGTTTCAATCCTCATCTGCTCCATCAAGCGCGAGTTTAGGTAGTGATAGTTCAAATTATTACTTACAGAAAATTGGGTTTCCTGGATTTGATCTGCCTGCAGCTACAAGTATGAATCCGATGTGTTTTACTTCAATTCTTGGTGGAAGTAATCAGCAACTGCCAGGATTGGAACTGGGATTATCTCAAGAGGGTCATTTAGGGGTTTTGAACC</genome_strand>
        <mrna_strand>GGTAGACCCATCTAGTTTCCATTGATGGATCCCAAACAGGCTAACCACAACAATATTAAGCCTACTCATGATCAGATAAAAGAGTTGCAGATTTTGAAAAATGATGAAACGAACAAGGTGGCTGCTCCCAAAAGAAAAGATAGGCATACAAAAGTTGAAGGTAGAGGGAGGAGAATACGTATGCCGGCGCTCTGTGCAGCAAGAATCTTCCAGCTTACGCGCGAATTGGGTCATAAATCTGATGGTGAGACAATTCAGTGGCTGCTGCAGCAAGCCGAGCCTTCGATTATTGCTGCTACTGGCACAGGGACAATACCTGCCTCGGCTTTAGCTGCAGCAGCCTCTGTTTCTCAACAGGGGATCTCTGTATCAGCTGGTTTAATGATTGAATCGGGGGCGAATATCGCGGGGTCTGGTAGCAGTAGAAGTAGTAATAGTAGGACCAATTGGCCAATGATCTGTGGGAATTTTGGAAGACCCCATTTGGCTACAGCAGGAATGTGGCCTGCCCCTGCCCCTGTTGTCACTAGTTTTGGGTTTCAATCCTCATCTGCTCCATCAAGCGCGAGTTTAGGTAGTGATAGTTCAAATTATTACTTACAGAAAATTGGGTTTCCTGGATTTGATCTGCCTGCAGCTACAAGTATGAATCCGATGTGTTTTACTTCAATTCTTGGTGGAAGTAATCAGCAACTGCCAGGATTGGAACTGGGATTATCTCAACAGGGTCATTTACGGGTTTTGAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E721357" ref_strand="+" ref_description="SGN-E721357 [FC13CE06]">
      <seq>atggatcccaaaccggctaaccacaacaatattaagcctactcatgatcagataaaagagttgcagattttgaaaaatgatgaaacgaacaaggtggctgctcccaaaagaaaagataggcatacaaaagttgaaggtagagggaggagaatacgtatgccggcgctctgtgcagcaagaatcttccagcttacgcgcgaattgggtcataaatctgatggtgagacaattcagtggctgctgcagcaagccgagccttcgattattgctgctactggcacagggacaatacctgcctcggctttagctgcagcagcctctgtttctcaacaggggatctctgtatcagctggtttaatgattgaatcgggggcgaatatcgcggggtctggtagcagtagaagtagtaatagtaggaccaattggccaatgatctgtgggaattttggaagaccccatttggctacagcaggaatgtggcctgcccctgcccctgttgtcactagttttgggtttcaatcctcatctgctccatcaagcgcgagtttaggtagtgatagttcaaattattacttacagaaaattgggtttcctggattttgatctgcctgcagctacaagtatgaatccgatgtgtttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="69180" stop="70418"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69480" g_stop="70118" g_length="639"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="640" r_length="640" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E721357" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E721357" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69480" e_stop="70118"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGATCCCAAACAGGCTAACCACAACAATATTAAGCCTACTCATGATCAGATAAAAGAGTTGCAGATTTTGAAAAATGATGAAACGAACAAGGTGGCTGCTCCCAAAAGAAAAGATAGGCATACAAAAGTTGAAGGTAGAGGGAGGAGAATACGTATGCCGGCGCTCTGTGCAGCAAGAATCTTCCAGCTTACGCGCGAATTGGGTCATAAATCTGATGGTGAGACAATTCAGTGGCTGCTGCAGCAAGCCGAGCCTTCGATTATTGCTGCTACTGGCACAGGGACAATACCTGCCTCGGCTTTAGCTGCAGCAGCCTCTGTTTCTCAACAGGGGATCTCTGTATCAGCTGGTTTAATGATTGAATCGGGGGCGAATATCGCGGGGTCTGGTAGCAGTAGAAGTAGTAATAGTAGGACCAATTGGCCAATGATCTGTGGGAATTTTGGAAGACCCCATTTGGCTACAGCAGGAATGTGGCCTGCCCCTGCCCCTGTTGTCACTAGTTTTGGGTTTCAATCCTCATCTGCTCCATCAAGCGCGAGTTTAGGTAGTGATAGTTCAAATTATTACTTACAGAAAATTGGGTTTCCTGGA-TTTGATCTGCCTGCAGCTACAAGTATGAATCCGATGTGTTTT</genome_strand>
        <mrna_strand>ATGGATCCCAAACCGGCTAACCACAACAATATTAAGCCTACTCATGATCAGATAAAAGAGTTGCAGATTTTGAAAAATGATGAAACGAACAAGGTGGCTGCTCCCAAAAGAAAAGATAGGCATACAAAAGTTGAAGGTAGAGGGAGGAGAATACGTATGCCGGCGCTCTGTGCAGCAAGAATCTTCCAGCTTACGCGCGAATTGGGTCATAAATCTGATGGTGAGACAATTCAGTGGCTGCTGCAGCAAGCCGAGCCTTCGATTATTGCTGCTACTGGCACAGGGACAATACCTGCCTCGGCTTTAGCTGCAGCAGCCTCTGTTTCTCAACAGGGGATCTCTGTATCAGCTGGTTTAATGATTGAATCGGGGGCGAATATCGCGGGGTCTGGTAGCAGTAGAAGTAGTAATAGTAGGACCAATTGGCCAATGATCTGTGGGAATTTTGGAAGACCCCATTTGGCTACAGCAGGAATGTGGCCTGCCCCTGCCCCTGTTGTCACTAGTTTTGGGTTTCAATCCTCATCTGCTCCATCAAGCGCGAGTTTAGGTAGTGATAGTTCAAATTATTACTTACAGAAAATTGGGTTTCCTGGATTTTGATCTGCCTGCAGCTACAAGTATGAATCCGATGTGTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E687903" ref_strand="+" ref_description="SGN-E687903 [T3_tus_81_J08]">
      <seq>tcccaaacaggctaaccacaacaatattaagcctactcatgatcagataaaagagttgcagattttgaaaaatgatgaaacgaacaaggtggctgctcccaaaagaaaagataggcatacaaaagttgaaggtagagggaggagaatacgtatgccggcgctctgtgcagcaagaatcttccagcttacgcgcgaattgggtcataaatctgatggtgagacaattcagtggctgctgcagcaagccgagccttcgattattgctgctactggcacagggacaatacctgcctcggctttagctgcagcagcctctgtttctcaacaggggatctctgtatcagctggtttaatgattgaatcgggggcgaatatcgcggggtctggtagcagtagaagtagtaatagtaggaccaattggccaatgatctgtgggaattttggaagaccccatttggctacagcaggaatgtggcctgcccctgcccctgttgtcactagttttgggtttcaatcctcatctgctccatcaagcgcgagtttaggtagtgatagttcaaattattacttacagaaaattgggtttcctggatttgatctgcctgcagctacaagtatgaatccgatgtgttttacttcaattcttggtggaagtaatcagcaactgccaggattggaactgggattatctcaagagggtcatttaggggttttgaaccagatataccagcaggcaagaatgcaacatccgcagcagcaacatcaacaacaacaacaatctccggaggaggattctcaaggatcangacattaataaagacctgagttaggttctttttggtgaatgatttttcatttggtaggatgtgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="69185" stop="70655"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69485" g_stop="70355" g_length="871"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="870" r_length="870" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E687903" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>871</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E687903" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69485" e_stop="70355"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCAAACAGGCTAACCACAACAATATTAAGCCTACTCATGATCAGATAAAAGAGTTGCAGATTTTGAAAAATGATGAAACGAACAAGGTGGCTGCTCCCAAAAGAAAAGATAGGCATACAAAAGTTGAAGGTAGAGGGAGGAGAATACGTATGCCGGCGCTCTGTGCAGCAAGAATCTTCCAGCTTACGCGCGAATTGGGTCATAAATCTGATGGTGAGACAATTCAGTGGCTGCTGCAGCAAGCCGAGCCTTCGATTATTGCTGCTACTGGCACAGGGACAATACCTGCCTCGGCTTTAGCTGCAGCAGCCTCTGTTTCTCAACAGGGGATCTCTGTATCAGCTGGTTTAATGATTGAATCGGGGGCGAATATCGCGGGGTCTGGTAGCAGTAGAAGTAGTAATAGTAGGACCAATTGGCCAATGATCTGTGGGAATTTTGGAAGACCCCATTTGGCTACAGCAGGAATGTGGCCTGCCCCTGCCCCTGTTGTCACTAGTTTTGGGTTTCAATCCTCATCTGCTCCATCAAGCGCGAGTTTAGGTAGTGATAGTTCAAATTATTACTTACAGAAAATTGGGTTTCCTGGATTTGATCTGCCTGCAGCTACAAGTATGAATCCGATGTGTTTTACTTCAATTCTTGGTGGAAGTAATCAGCAACTGCCAGGATTGGAACTGGGATTATCTCAAGAGGGTCATTTAGGGGTTTTGAACCAGATATACCAGCAGGCAAGAATGCAACATCCGCAGCAGCAACATCAACAACAACAACAATCTCCGGAGGAGGATTCTCAAGGATCAGGACATTAATAAAAGACCTGAGTTAGGTTCTTTTTGGTGAATGATTTTTCATTTGTTAGGATGTGT</genome_strand>
        <mrna_strand>TCCCAAACAGGCTAACCACAACAATATTAAGCCTACTCATGATCAGATAAAAGAGTTGCAGATTTTGAAAAATGATGAAACGAACAAGGTGGCTGCTCCCAAAAGAAAAGATAGGCATACAAAAGTTGAAGGTAGAGGGAGGAGAATACGTATGCCGGCGCTCTGTGCAGCAAGAATCTTCCAGCTTACGCGCGAATTGGGTCATAAATCTGATGGTGAGACAATTCAGTGGCTGCTGCAGCAAGCCGAGCCTTCGATTATTGCTGCTACTGGCACAGGGACAATACCTGCCTCGGCTTTAGCTGCAGCAGCCTCTGTTTCTCAACAGGGGATCTCTGTATCAGCTGGTTTAATGATTGAATCGGGGGCGAATATCGCGGGGTCTGGTAGCAGTAGAAGTAGTAATAGTAGGACCAATTGGCCAATGATCTGTGGGAATTTTGGAAGACCCCATTTGGCTACAGCAGGAATGTGGCCTGCCCCTGCCCCTGTTGTCACTAGTTTTGGGTTTCAATCCTCATCTGCTCCATCAAGCGCGAGTTTAGGTAGTGATAGTTCAAATTATTACTTACAGAAAATTGGGTTTCCTGGATTTGATCTGCCTGCAGCTACAAGTATGAATCCGATGTGTTTTACTTCAATTCTTGGTGGAAGTAATCAGCAACTGCCAGGATTGGAACTGGGATTATCTCAAGAGGGTCATTTAGGGGTTTTGAACCAGATATACCAGCAGGCAAGAATGCAACATCCGCAGCAGCAACATCAACAACAACAACAATCTCCGGAGGAGGATTCTCAAGGATCANGACATTAAT-AAAGACCTGAGTTAGGTTCTTTTTGGTGAATGATTTTTCATTTGGTAGGATGTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E327677" ref_strand="+" ref_description="SGN-E327677 [cTOC-20-P22]">
      <seq>cccaaacaggctaaccacaacaatattaagcctactcatgatcagataaaagagttgcagattttgaaaaatgatgaaacgaacaaggtggctgctcccaaaagaaaagataggcatacaaaagttgaaggtagagggaggagaatacgtatgccggcgctctgtgcagcaagaatcttccagcttacgcgcgaattgggtcataaatctgatggtgagacaattctagtgggctgctgcagcaagccgagccttcgattattgctgctactggcacagggacaatacctgcctcggctttagctgcagcagcctctgtttctcaacaggggatctctgtatcagctggtttaatgattgaatcgggggcgaatatcgcggggtctggtagcagtagaagtagtaatagtaggaccaattggccaatgatctgtgggaattttggaagaccccatttggctacagcaggaatgtggcctgcccctgcccctgttgtcactagttttgggtttcaatcctcatctgctccatcaagcgcgagtttaggtagtgatagttcaaattattacttacagaaaattgggtttcctggatttgatctgcctgcagctacaagtatgaatccgatgtgttttacttcaattcttggtggaagtaatcagcaactgccaggattggaactgggattatctcaagagggtcatttangggttttgaaccagatataccagcaggcaagaatgcaacatccgcagcagcaacatcaacaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="69186" stop="70555"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69486" g_stop="70255" g_length="770"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="772" r_length="772" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E327677" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>770</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E327677" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69486" e_stop="70255"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCAAACAGGCTAACCACAACAATATTAAGCCTACTCATGATCAGATAAAAGAGTTGCAGATTTTGAAAAATGATGAAACGAACAAGGTGGCTGCTCCCAAAAGAAAAGATAGGCATACAAAAGTTGAAGGTAGAGGGAGGAGAATACGTATGCCGGCGCTCTGTGCAGCAAGAATCTTCCAGCTTACGCGCGAATTGGGTCATAAATCTGATGGTGAGACAATTC-AGT-GGCTGCTGCAGCAAGCCGAGCCTTCGATTATTGCTGCTACTGGCACAGGGACAATACCTGCCTCGGCTTTAGCTGCAGCAGCCTCTGTTTCTCAACAGGGGATCTCTGTATCAGCTGGTTTAATGATTGAATCGGGGGCGAATATCGCGGGGTCTGGTAGCAGTAGAAGTAGTAATAGTAGGACCAATTGGCCAATGATCTGTGGGAATTTTGGAAGACCCCATTTGGCTACAGCAGGAATGTGGCCTGCCCCTGCCCCTGTTGTCACTAGTTTTGGGTTTCAATCCTCATCTGCTCCATCAAGCGCGAGTTTAGGTAGTGATAGTTCAAATTATTACTTACAGAAAATTGGGTTTCCTGGATTTGATCTGCCTGCAGCTACAAGTATGAATCCGATGTGTTTTACTTCAATTCTTGGTGGAAGTAATCAGCAACTGCCAGGATTGGAACTGGGATTATCTCAAGAGGGTCATTTAGGGGTTTTGAACCAGATATACCAGCAGGCAAGAATGCAACATCCGCAGCAGCAACATCAACAACA</genome_strand>
        <mrna_strand>CCCAAACAGGCTAACCACAACAATATTAAGCCTACTCATGATCAGATAAAAGAGTTGCAGATTTTGAAAAATGATGAAACGAACAAGGTGGCTGCTCCCAAAAGAAAAGATAGGCATACAAAAGTTGAAGGTAGAGGGAGGAGAATACGTATGCCGGCGCTCTGTGCAGCAAGAATCTTCCAGCTTACGCGCGAATTGGGTCATAAATCTGATGGTGAGACAATTCTAGTGGGCTGCTGCAGCAAGCCGAGCCTTCGATTATTGCTGCTACTGGCACAGGGACAATACCTGCCTCGGCTTTAGCTGCAGCAGCCTCTGTTTCTCAACAGGGGATCTCTGTATCAGCTGGTTTAATGATTGAATCGGGGGCGAATATCGCGGGGTCTGGTAGCAGTAGAAGTAGTAATAGTAGGACCAATTGGCCAATGATCTGTGGGAATTTTGGAAGACCCCATTTGGCTACAGCAGGAATGTGGCCTGCCCCTGCCCCTGTTGTCACTAGTTTTGGGTTTCAATCCTCATCTGCTCCATCAAGCGCGAGTTTAGGTAGTGATAGTTCAAATTATTACTTACAGAAAATTGGGTTTCCTGGATTTGATCTGCCTGCAGCTACAAGTATGAATCCGATGTGTTTTACTTCAATTCTTGGTGGAAGTAATCAGCAACTGCCAGGATTGGAACTGGGATTATCTCAAGAGGGTCATTTANGGGTTTTGAACCAGATATACCAGCAGGCAAGAATGCAACATCCGCAGCAGCAACATCAACAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E722486" ref_strand="+" ref_description="SGN-E722486 [FC17BF10]">
      <seq>gggcgattggcggccaatcggccgaattgagttgtgtctagggttcccccattttagctgtgcgattcaatgcaatcaagcagaagaatccttgctctttaatacactggtttcggaggtgaaaaaactgagaagaaagaggttggtgggcgatcacaaatgccggaggaagatttgactgaagttaagtttcgtttgttcgatggatcaaatgtgggtccatttcagttctccccggcttcaaccgtagctatgctgaaagagagaattgttgctgagtggcctaaagataagaaaattgcacctaaggcggcaaatgatgtcaagttgataagtgctgggaaaattttggagaacaacaagactgttggtcaatgtaaaacacctttcggtgaactacctaatggtgtgattaccatgcatgctgttgtacagccatcagtaggtaaatcaaaatcagaaaagaagattgacgagactccgaagaaaagtgtgtgcgcgtgtaccataatgtgagattgtaagtgattcaagtttaatcctgtggtattcttgggggataaactgctgctgtgaagttcagggaaaacagtatgatagctcattgttacttgtttgttcgttgaacggctattcaatgtaacagcgtgtctatttgtttgaatgaatttggtaggtgtacattttgtaattgcagatttcttatacagaaatacagaaagtgtgctggattgcatgctataggattttaccgagctcttgttattctattctgggtccttattattcaacttagatcgtgatgatccgtatactctaatctttgacgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="81509" stop="72659"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81210" g_stop="81119" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="109" r_length="92" r_score="0.935"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81118" i_stop="81027" i_length="92">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81026" g_stop="80847" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="289" r_length="180" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80846" i_stop="78868" i_length="1979">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78867" g_stop="78697" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="460" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78696" i_stop="73330" i_length="5367">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73329" g_stop="72959" g_length="371"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="831" r_length="371" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E722486" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>814</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E722486" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81210" e_stop="81119"/>
          <exon e_start="81026" e_stop="80847"/>
          <exon e_start="78867" e_stop="78697"/>
          <exon e_start="73329" e_stop="72959"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGTGGAGTTCAGTTGTGTCTAGGGTTCCCCCATTTTAGCTGTGCGATTCAATGCAATCAAGCAGAAGAATCCTTGCTCTTTAATACACTGGTAAACTTGTTTATTCACGTTGCTTATATATATATATTTGCTTCTCATCTCGCTTTTTTCTGACTGTTAAGCTGTTTGTCTCTGCGATTTAGGTTTCGGAGGTGAAAAAACTGAGAAGAAAGAGGTTGGTGGGCGATCACAAATGCCGGAGGAAGATTTGACTGAAGTTAAGTTTCGTTTGTTCGATGGATCAGATGTGGGTCCATTTCAGTTCTCCCCGGCTTCAACCGTAGCTATGCTGAAAGAGAGAATTGTTGCTGAGTGGCCTAAAGGTTAGTAAAATTACGTCATTTTTGTTAGTTTTTGGAGGCTTGCGTTGCATAATTGAGATGTTTTTGGTTGAGTTCTGTTAATTGTTTATGGAAATGGGGAAACAGGGTTTGATGAGAATACCCATAAATTTAATGACACTTAGCACCCTAAGAAACAGTATTCAGTACCTCATCAGCCTCCAACCCAAATAAATGTTTGAAAGAAATGTTTTTTGTTTGCATTTTTGGGGCTTTTAGTTGGGGTTTTGGTGATCAAGGGATGGATCTTTTAATCTGAGATTTTGATTGATAAGGCTAAAATGAAAATGGACTAAAGTTCACATCAAATAGCTAAAGAGATTTTTGTCATGTTAACTTTCGATACCAAACACACTTGTATGCAAAATGATGAGCAGAATACCTAGCTAGGCCAAATCCCTGTGGCACTCCTATCCAACACGGTAATCCTTAATACACTGAACCTTTTGAAAGAGTCTAACAAGCAACACCACTTTCGCAACGTGCACAAAATAGGTGTGTTGTGCCTGTGTGAATTTTGTCCCAGCCCATATTTGATATTCCTATCCCCATAGAACCCCTCCTCCCCTTTCTCCCACACAGGAGATACAAAATTTCAGATACGAAAATTGAGTGCTTGTTGTTCAAATCTTGTGGAATCGGTTATATTGTGAGACTTACAAGCTTTAAGACTGATTTTTGTGAAGGTTGGGTGGAAAAATTAAGGAATCTACCATTGTTGGGCATTTTTTTAGATGAAGTAATAGATTTCACCTTCCATTGTTGGGCATTGAGAAAACTTGAAAATACAACTGGGTCTTGTTGACTTTTGAGTTGTGCTCAATTCATTTGGGGTTTAATTAAATAGTTTTTTATGGAAACTTTCTCATGGACAACCATGGTGGTGGCAGCCATGATCAATTAAATGTTAATGACATGTGTCACGACCATATTAGGGCCTGACATACACATCGTTTTGATAACTGGCCAAGCACAGAAGTGGTGTGTAAAAGATACTTTGAAAAGATTGGCTGTGTAAAAGGTTATTCGTATTGGCCAAAGGTCTCTGATTGTTCTCCATACCTCAACCCCATAGTTAGCTAACATCTTTAACTGCTTCTACATCTAATTCAGAAATCTAAAATGATTTTTGAATTAACACTAAGTGATGCAGTAGAACAGATGATATCTGGGTCTGAATCCTGAGAATGGAGAAATCTCTTTTAGGGAATGCCTAATCTCAATGAACTTTTGTGGCGTGAATTTGGATTAATTGGACAAGTGGATTCTAAGTACCTCATGTTTAACAAAAAAATTATTTTTGTGTTTGATTGACATGATTTTTACTTTATATATTTCGTTTAATTTTACGTTGTTTAGTTTGTTTGTCCAGTTAATCATTTTCTTTGTTTAATAGTTATTTTTTCTTACATTAGGTAGTTGTATTGTGCATGCGCACACACGTATAGAGATAGGTGGGACTTGTGAGGTTGTGAGCAACAAGTTTCAAAGAACTTATAATTTGCCTTGTTAGACAAATTATATAGTGTTGTAATTAATTGGTCTAATATGGAGATTGATAAAGAGGATTTTAGCCAATTTCAATTAACTTAGAGTTTGAAGCACAACTTTTTGATAATTTAACTTTTGTTAAAGAGCTTTAGTTCAGTATTTTTAAGTCAACCAAATTGTACCAAAATCCAAGCCCAATTCATACTGGACGAATGAACATAATCAAATCAGTATAAGAATTTTGTTTGAGGAGTATTGGTTATGAGCTGCAATTGGCTATCCCTATTTTTCTTTATGCCATCCAGAAAAGTCTATTGATATCTAAATCCTTTAAAGCCTTTAATGTTTGACAGATCTTCATTTTATTAACTTACTATAAACTATATATTCAGGAAATTGGGAAAGGGTTATTATTTATTTCTATGTGGCCTCTAATTTCCTGAGATTAAGTTGTGATGCTCTCTTGGCAGATAAGAAAATTGCACCTAAGGCGGCAAATGATGTCAAGTTGATAAGTGCTGGGAAAATTTTGGAGAACAACAAGACTGTTGGTCAATGTAAAACACCTTTCGGTGAACTACCTAATGGTGTGATTACCATGCATGCTGTTGTACAGCCATCAGTAGGTAAATCAAAATCAGGTGGGTTCCTCTTACTTGATTTGTGGTAATAGACACTGGTTTTACCCTTTCTGTAATGTATTTATATTTTTTGAGGCTATTGGTGATTCTGTTACTGTGTGTTCAGGAAAAAATAAGGACAAGAATCTTCTTCATCTTCTTAATATCTTAATTGTCATGCAATATAGTTAACTGGTTGGTTGTATGTACCTTATTTTTAACATGGTAATGCTTTTAATGTCTATGCCTCTATGGTTCTTTACATTTTGCCTTACAAAGAAATTTATGTGGTATGTGTTAAAATTCCAGATGATTGCAAGGGCTCGTGCCCAGGGACCATTTTCAGATGTATGTTGTATTAATTGCAGTGGTTCATATGGTATACTGAATATTTTAGCTTATGTAACAGAAAGTATGAAGTTAGAATCGTGTTTCAACCCCGTCATATGCAAGATAGTATTAACTCTTCAAGTGATGGAGACTCAGTTTCTGTATTTTCATGTCTTAGCTTGCATGTCAGGTCTTCATTTTAGAAGAGATCAAAAGGGTTACTATAAATTCAAGTGTCTATCATAAACTGTAACAATAAAAAAGGAGTGCTGCAGGTTGCATTACCTTAAGTTCTAGTTGATAACCTAAACCTAGCTTATGTCTTAAAGTATAGGGTTTTATCTGATTCATAATCCACATATGAAGAGTTGCTCCAAACAAATTACTAAACATATTTAAGTTAAACGTAACTAGGTTGATCTACCACTGAATATCAACTATGATTACTTATCCTGACACCATCGTAATTAATATGAGCTTTCAATTAAGAACATACTTAATCAAATCTGATTTCACCTAATTTAGTGAGGATTGCATTTAAAAAATGTTACTCTGTCTATATTAGTGTCGAAGTGCGGAATTTAAGAAAACAACCTTTGAATCTTGTAATCATAAACTAAGGATATTCGTAATGTGCCAAATTGCCCATTGAATCCCGTGGTTTTAGACAAGCGAAGTAGAGTTTTGGAATTAGAGAGTCACCTACTTTAAAAAGAGACTTTCTTTTTGAAATAGACTAAAAAGGGAAGTAAGGTACTTGAGTTGAAACGGGGGAAGTATTCTTTTATATATACCATGTTGCATCTTGTAGATACACCACAAATGAAAATTATTGTGATTATGCCGATGGTCAAGAAAGTTAACTTGTGATGATGTGTATAGAACAATAAGAACAACAAAATTAGAGTTGATATTCCCCAAAAAGATGAAGAATTATATTGTGTTTAGTATATAATATATGGATTCATCTACTATATATAGTATATATGGGCCAGGAGACGTGTCGTATACAACATTACACACTATGTAGGTGATTAGGTCATCTGTGCAAAGCATGCCCTGATTTGGTTATAATAGTTGGGATCACATTCCTTCCATATTAGTTTCATATTCATGAGCCTTCAAGAATAGAAATATTTTTATGTAGATTGAGATGAGTAGTTTTTTTTGCTATTGGGTTTAGTCAATGATTTGCTTAGTATAAGCTCATTTCTTTGGAGACCCAGTGTTTTTAGAAACAAAAAGTGCAAAAACGAGGTCTATTGGCTTGAGGCAAAAAGTGATAAGTGAAGGGCACACTTCTTTGGAATGAAGTGCATAATTTGAGAAATTTAGATAATAATCTATGACCCAGATGTTGCAAAAAGCTTGCAACTCATAGGTTGTTCGTGAACAATATTACCTCAAAAGCTCCAAATGACATGTTAAGGACTTAACATTTTACAACATTACCAGTTTTAAAAAAAGGTCTTCCATCGTAGGTATTCAAGATCCACTTTTCCCAAATTATGTATCAGTTTTTATTTTGGCACTCCCATAAATGTTTGTCATCCTCAAGATAAAAGTTAGTTGTATACCTTTGTTTTTATTCATGGTGTTAGTTGGAACATGTAAATGATGCTGAATCAGTTCTGCAGATGTTAGAAACCTTCGACCTTCAGGGTTAGATGGGATATATTCTCATTTGATTTTAACAGTGTACATATGTACATCACGTCCTCTGTGCTAAGTTTATTTCTAAAAGTTACTTCACTTTCTCCCAAACAAAAAACTCTCTTAAACGTTGGTTACACTTTTATAAACAATAATATTCGACATGCTTAATTTATAAAAACACACTACTTCTAAACACTCCTCATGTTGGTGATGTATCGTAGACTCATTAATTATCTTAAATACAATCATTAGACATTCTAATTATCAAACTCACTTTTGAATCATGATTTTGATGTTTTTCCTCTTAAATACATAGGTTAAATGAATTTGTTAAATTCTAAGCCTAGTCTTGACATGAAATGGGGCATACAATGGGATAGGGTGAGTGAGTACTAATGTGTTAATTCATGTCTGGCGATGTTAACTATTCTATTTTGGGACAAGCAACTGTTCCAGTCTAGTATCAATGTTTTATCCAATTTTTATGAAGATGTTTCGCCTGGGAAATCTCTGAATATTCTTTTCTTGCTTTAGTTCCAAGTTGTTGGCTGGTTTATAACAATTCCAAGTTTAGAATGTCTTGTCAGAATTACCTTTTGTGGGTTGAGCTTTGTAAATTTAGGTTTAACAAATCGGGAAAATATTATTAATTTTTTAATCTTCTTATTTAGTGATCGATACTCATATTGAAATTTAACTAATCTGAGTGTCTAATTTGGAAAAAGGGGCTAGAGGTGGAACATTTGATTTTTCAACTGCTAGGATTAAACCTTTTGGATTCTTGAATAGAGTCAATTGTTGTTGGAGAGATTTGAAGTTACAGTATTCTTATGTGAATAGATTCTAAGAGCTTTTTGTGTACTACTTTATCCTCTATTCTTTTGTGACAGCATCCCTATTATTTTATAAGAGCTGGTGTGAACTCAAGTTTATAAGATATTTCAACCAATATGTATTACATTAGTAGGAGCTGTCACCCTCCAACATCCGTCGCTTCTACTTACATATCTGATTCTGGAAGGCATGTATCTGGAAAATGTTTTTCCTTTTCCTCTTTATTGTACTTTGTACTAATTTACGTAATAGTAAACAAAAGTATTTTCTTCAAATGAATTTGAGACTGGGAGTGTTAATGTGAAGTTGCCCACATGAATTGTTAAAGATGAGAATACATCAATGAACTTGAAATTTACAAAATAAATGAAATGTTCTTTTGGTATATAAAGGATTTTATTACCAAAAGAGAATCTGTACAACACCTTGACATGATAATTTAGAATTGGACAACAAGTTCCAACTTCTAGAGTGACCTAATGCTCCTACTTTATTTTAATATTATCAAAATAGGAGCAGATGTGATATTTATTCAAGAAACAAAAATGGAAACTTTGACGAATAGAACTATTAGAAGTGTGTGTGTGTGTTGGGGCGGGGAGGGAGTAAGATTACTTTCTGGCACAGGACAGTGCAGGACAAATACTTATTCTTTGGGATGATAGGAAGGCGAGAGAACAGAAAGGAGGAGTATGTTGAGCTTAATAAGGGGGAGTTCATGTTAAGGGTGCAGTTTAGTTTTAAAATAGGGTGGAATGCAGTTTTCTTTGGAGAAGTTAGGGAATTGTATGGAAAAGAGGTGGGAGATCCCTTGGGTGTTAAAAAGGGATTTTTAACACTACAAGGGATCTTAGGAAGGGATTTTTAACACTATAAGATTCGCGGAGGAGAGGTTGGGTTACAGGCGATTTCCAGGGAAATGGAGGAATTCTTGCAGTTTTTAACCACCTTCTTATAGATTTACCTTTGATAGGTGCCAATTTCAACCAAGCATTATTCAATTCCCTCTCTTGTGGAGATCATTCACCTATTATGTTGGATGGTGTAGGGGTAGAAGGATGAGATCACTTTTCAAATTCGAGAACATGTGGCTGTGAGAGACAGACTTTGTAGATAGAGTAGCCGGGGCATAGAGGAGAGACCATCTTTCAGACTTGTAAAAAAGTAAAGATGCTTAAGAAAGACTTAAGATGTGGAATCAGAGGTAGTGTTTGGGAGGGTAGAGGTGAAAATGAGGGAGATTATGAATGAGGTGGGGGAATTAGAAAGAATACAGGTGGGAAGGAAGTTGGACAAAAGGGAAATGGAGAAAAAATAAATTTTAAAAATGGAATTAGCTTTAAGAGACTAGTTGGAGACAAAAATTGAGCTCGTTGGGGTCCGAGTATTGGTATTCTAACACAAGTTCTTTTGCAGGGTAATAGTTGCAAATAGGAGGAGAAATTTAATAGAGTGAGTAGAGTTGGGGGGAGATACATACATGTGGGAGAGGAAGAAGTAGGAAGAGCAGTTGTTCAATTCTATGAACAATTGTTCAAAGAGGAAGAAGAATGGAGGCCAATTAGATAGGAGTGGATAATAGTGAGCGGTAAGAGAGAAAAATTGACATAAGGGAGGTGCGTGAGGCAGTGGGGTGTTGTGCGGGCGACAAGGCTCGAGGTCTAGATGGTTTAACTTTTGTTTTCTTTCAGCATTGTTATACAGTCAGACATGATGAATTAAGTACTATTGACGAGTTTTAGGAGGGGTAGTTTCGGAAGGAGCTTAAATGCTTCTTTGATTGTAATTTTTACAAAGGAGGAAGAGACTTCTAGAATTGGGGACTACAAACCAATTGGTCTAGTTGGAAGCATCTACAAGATCATTTCTAAGGTGCTTTCTGATAGACTTAAAGAGAGTTTTTGCACGAGACTGTTTCGTTTTTGCAAAATGCTTTTGTTGATGGAAGGCAGATTTTGAATGCAGCTTTGGTGGATAATTAAGTGGTAGATTCGAGGGAGAAACAAGGTGAGTCGGGTGTTTTGTGCAAGTTAAATTTTGCTGAGTTCAATCAAGATCTAACTGTGCTAGTGGATTTTGACCTGTTGAAGTGCTCTTGCTTATATGTGGCAAGGTGCTTAACTAAATCTTATCCCAGTGAGATTTTTGTAATTGGAGATTCTCTTGAGTTAGTTATTTCATGAATCCTCCACTAATGTTTGGCGGATGTCTATTTTCGTCTAATGCTGAAGTTGTAGTATCCAGGAAATACTTGTCTCGTGTAAATGTGAGCTTCATTAAATTTTACTGAAATAAGACTTTACCTTCTAAGCTTGACATGAACCCTCTATTTGTTCTAATGCTGAATTGAGGATAAGATACACGGTAGAAGACCCGCCTTGCCACACCCTTAACCTCTAACCCTGTGCTTTTCTTGTAAAATTTATTTATTTATGTATAGAAGTTCAATTCCGTGCCTGTTTTCTATCCTTAACAAGTATCTTCATTCCAGGGTGTGGTGTTAATAATTCATAGTGTACACTTTTTTTTTTTTCCTTTTGGCTGCTGAAACTTGTCTTTATATGACAGAAAAGAAGATTGACGAGACTCCGAAGAAAAGTGTGTGCGCGTGTACCATAATGTGAGATTGTAAGTGATTCAAGTTTAATCCTGTGGTATTCTTGGGGGATAAACTGCTGCTGTGAAGTTCAGGGAAAACAGTATGATAGCTCATTGTTACTTGTTTGTTCGTTGAACGGCTATTCAATGTAACAGCGTGTCTATTTGTTTGAATGAATTTGGTAGGTGTACATTTTGTAATTGCAGATTTCTTATACAGAAATACAGAAAGTGTGCTGGATTGCATGCTATAGGATTTTACCGAGCTCTTGTTATTCTATTCTGGGTCCTTATTATTCAACTTAGATCGTGATGATCCGTATACTCTAATCTTTGACGTC</genome_strand>
        <mrna_strand>TCGGCCGAATTGAGTTGTGTCTAGGGTTCCCCCATTTTAGCTGTGCGATTCAATGCAATCAAGCAGAAGAATCCTTGCTCTTTAATACACTG............................................................................................GTTTCGGAGGTGAAAAAACTGAGAAGAAAGAGGTTGGTGGGCGATCACAAATGCCGGAGGAAGATTTGACTGAAGTTAAGTTTCGTTTGTTCGATGGATCAAATGTGGGTCCATTTCAGTTCTCCCCGGCTTCAACCGTAGCTATGCTGAAAGAGAGAATTGTTGCTGAGTGGCCTAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGAAAATTGCACCTAAGGCGGCAAATGATGTCAAGTTGATAAGTGCTGGGAAAATTTTGGAGAACAACAAGACTGTTGGTCAATGTAAAACACCTTTCGGTGAACTACCTAATGGTGTGATTACCATGCATGCTGTTGTACAGCCATCAGTAGGTAAATCAAAATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAAGATTGACGAGACTCCGAAGAAAAGTGTGTGCGCGTGTACCATAATGTGAGATTGTAAGTGATTCAAGTTTAATCCTGTGGTATTCTTGGGGGATAAACTGCTGCTGTGAAGTTCAGGGAAAACAGTATGATAGCTCATTGTTACTTGTTTGTTCGTTGAACGGCTATTCAATGTAACAGCGTGTCTATTTGTTTGAATGAATTTGGTAGGTGTACATTTTGTAATTGCAGATTTCTTATACAGAAATACAGAAAGTGTGCTGGATTGCATGCTATAGGATTTTACCGAGCTCTTGTTATTCTATTCTGGGTCCTTATTATTCAACTTAGATCGTGATGATCCGTATACTCTAATCTTTGACGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E327915" ref_strand="+" ref_description="SGN-E327915 [cTOC-22-M12]">
      <seq>ccattttagctgtgcgattcaatgcaatcaagcagaagaatccttgctctttaatacactggtttcggaggtgaaaaaactgagaagaaagaggttggtgggcgatcacaaatgccggaggaagatttgactgaagttaagtttcgtttgttcgatggatcagatgtgggtccatttcagttctccccggcttcaaccgtagctatgctgaaagagagaattgttgctgagtggcctaaagataagaaaattgcacctaaggcggcaaatgatgtcaagttgataagtgctgggaaaattttggagaacaacaagactgttggtcaatgtaaaacacctttcggtgaactacctaatggtgtgattaccatgcatgctgttgtacagccatcagtaggtaaatcaaaatcagaaaagaagattgacgagactccgaagaaaagtgtgtgcgcgtgtaccataatgtgagattgtaagtgattcaagtttaatcctgtggtattcttgggggataaactgctgctgtgaagttcagggaaaacagtatgatagctcattgttacttgtttgttcgttgaacggctattncatgtaacagcgtgtctatttgtttgatgaatttggtaggtgtacattttgtaattgcagatttcttatacagaaatacagaaagtgtgctggattgcatgctataggattttaccgaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="81479" stop="72735"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81179" g_stop="81119" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81118" i_stop="81027" i_length="92">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81026" g_stop="80847" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="241" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80846" i_stop="78868" i_length="1979">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78867" g_stop="78697" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="412" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78696" i_stop="73330" i_length="5367">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73329" g_stop="73032" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="709" r_length="297" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E327915" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>710</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E327915" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81179" e_stop="81119"/>
          <exon e_start="81026" e_stop="80847"/>
          <exon e_start="78867" e_stop="78697"/>
          <exon e_start="73329" e_stop="73032"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATTTTAGCTGTGCGATTCAATGCAATCAAGCAGAAGAATCCTTGCTCTTTAATACACTGGTAAACTTGTTTATTCACGTTGCTTATATATATATATTTGCTTCTCATCTCGCTTTTTTCTGACTGTTAAGCTGTTTGTCTCTGCGATTTAGGTTTCGGAGGTGAAAAAACTGAGAAGAAAGAGGTTGGTGGGCGATCACAAATGCCGGAGGAAGATTTGACTGAAGTTAAGTTTCGTTTGTTCGATGGATCAGATGTGGGTCCATTTCAGTTCTCCCCGGCTTCAACCGTAGCTATGCTGAAAGAGAGAATTGTTGCTGAGTGGCCTAAAGGTTAGTAAAATTACGTCATTTTTGTTAGTTTTTGGAGGCTTGCGTTGCATAATTGAGATGTTTTTGGTTGAGTTCTGTTAATTGTTTATGGAAATGGGGAAACAGGGTTTGATGAGAATACCCATAAATTTAATGACACTTAGCACCCTAAGAAACAGTATTCAGTACCTCATCAGCCTCCAACCCAAATAAATGTTTGAAAGAAATGTTTTTTGTTTGCATTTTTGGGGCTTTTAGTTGGGGTTTTGGTGATCAAGGGATGGATCTTTTAATCTGAGATTTTGATTGATAAGGCTAAAATGAAAATGGACTAAAGTTCACATCAAATAGCTAAAGAGATTTTTGTCATGTTAACTTTCGATACCAAACACACTTGTATGCAAAATGATGAGCAGAATACCTAGCTAGGCCAAATCCCTGTGGCACTCCTATCCAACACGGTAATCCTTAATACACTGAACCTTTTGAAAGAGTCTAACAAGCAACACCACTTTCGCAACGTGCACAAAATAGGTGTGTTGTGCCTGTGTGAATTTTGTCCCAGCCCATATTTGATATTCCTATCCCCATAGAACCCCTCCTCCCCTTTCTCCCACACAGGAGATACAAAATTTCAGATACGAAAATTGAGTGCTTGTTGTTCAAATCTTGTGGAATCGGTTATATTGTGAGACTTACAAGCTTTAAGACTGATTTTTGTGAAGGTTGGGTGGAAAAATTAAGGAATCTACCATTGTTGGGCATTTTTTTAGATGAAGTAATAGATTTCACCTTCCATTGTTGGGCATTGAGAAAACTTGAAAATACAACTGGGTCTTGTTGACTTTTGAGTTGTGCTCAATTCATTTGGGGTTTAATTAAATAGTTTTTTATGGAAACTTTCTCATGGACAACCATGGTGGTGGCAGCCATGATCAATTAAATGTTAATGACATGTGTCACGACCATATTAGGGCCTGACATACACATCGTTTTGATAACTGGCCAAGCACAGAAGTGGTGTGTAAAAGATACTTTGAAAAGATTGGCTGTGTAAAAGGTTATTCGTATTGGCCAAAGGTCTCTGATTGTTCTCCATACCTCAACCCCATAGTTAGCTAACATCTTTAACTGCTTCTACATCTAATTCAGAAATCTAAAATGATTTTTGAATTAACACTAAGTGATGCAGTAGAACAGATGATATCTGGGTCTGAATCCTGAGAATGGAGAAATCTCTTTTAGGGAATGCCTAATCTCAATGAACTTTTGTGGCGTGAATTTGGATTAATTGGACAAGTGGATTCTAAGTACCTCATGTTTAACAAAAAAATTATTTTTGTGTTTGATTGACATGATTTTTACTTTATATATTTCGTTTAATTTTACGTTGTTTAGTTTGTTTGTCCAGTTAATCATTTTCTTTGTTTAATAGTTATTTTTTCTTACATTAGGTAGTTGTATTGTGCATGCGCACACACGTATAGAGATAGGTGGGACTTGTGAGGTTGTGAGCAACAAGTTTCAAAGAACTTATAATTTGCCTTGTTAGACAAATTATATAGTGTTGTAATTAATTGGTCTAATATGGAGATTGATAAAGAGGATTTTAGCCAATTTCAATTAACTTAGAGTTTGAAGCACAACTTTTTGATAATTTAACTTTTGTTAAAGAGCTTTAGTTCAGTATTTTTAAGTCAACCAAATTGTACCAAAATCCAAGCCCAATTCATACTGGACGAATGAACATAATCAAATCAGTATAAGAATTTTGTTTGAGGAGTATTGGTTATGAGCTGCAATTGGCTATCCCTATTTTTCTTTATGCCATCCAGAAAAGTCTATTGATATCTAAATCCTTTAAAGCCTTTAATGTTTGACAGATCTTCATTTTATTAACTTACTATAAACTATATATTCAGGAAATTGGGAAAGGGTTATTATTTATTTCTATGTGGCCTCTAATTTCCTGAGATTAAGTTGTGATGCTCTCTTGGCAGATAAGAAAATTGCACCTAAGGCGGCAAATGATGTCAAGTTGATAAGTGCTGGGAAAATTTTGGAGAACAACAAGACTGTTGGTCAATGTAAAACACCTTTCGGTGAACTACCTAATGGTGTGATTACCATGCATGCTGTTGTACAGCCATCAGTAGGTAAATCAAAATCAGGTGGGTTCCTCTTACTTGATTTGTGGTAATAGACACTGGTTTTACCCTTTCTGTAATGTATTTATATTTTTTGAGGCTATTGGTGATTCTGTTACTGTGTGTTCAGGAAAAAATAAGGACAAGAATCTTCTTCATCTTCTTAATATCTTAATTGTCATGCAATATAGTTAACTGGTTGGTTGTATGTACCTTATTTTTAACATGGTAATGCTTTTAATGTCTATGCCTCTATGGTTCTTTACATTTTGCCTTACAAAGAAATTTATGTGGTATGTGTTAAAATTCCAGATGATTGCAAGGGCTCGTGCCCAGGGACCATTTTCAGATGTATGTTGTATTAATTGCAGTGGTTCATATGGTATACTGAATATTTTAGCTTATGTAACAGAAAGTATGAAGTTAGAATCGTGTTTCAACCCCGTCATATGCAAGATAGTATTAACTCTTCAAGTGATGGAGACTCAGTTTCTGTATTTTCATGTCTTAGCTTGCATGTCAGGTCTTCATTTTAGAAGAGATCAAAAGGGTTACTATAAATTCAAGTGTCTATCATAAACTGTAACAATAAAAAAGGAGTGCTGCAGGTTGCATTACCTTAAGTTCTAGTTGATAACCTAAACCTAGCTTATGTCTTAAAGTATAGGGTTTTATCTGATTCATAATCCACATATGAAGAGTTGCTCCAAACAAATTACTAAACATATTTAAGTTAAACGTAACTAGGTTGATCTACCACTGAATATCAACTATGATTACTTATCCTGACACCATCGTAATTAATATGAGCTTTCAATTAAGAACATACTTAATCAAATCTGATTTCACCTAATTTAGTGAGGATTGCATTTAAAAAATGTTACTCTGTCTATATTAGTGTCGAAGTGCGGAATTTAAGAAAACAACCTTTGAATCTTGTAATCATAAACTAAGGATATTCGTAATGTGCCAAATTGCCCATTGAATCCCGTGGTTTTAGACAAGCGAAGTAGAGTTTTGGAATTAGAGAGTCACCTACTTTAAAAAGAGACTTTCTTTTTGAAATAGACTAAAAAGGGAAGTAAGGTACTTGAGTTGAAACGGGGGAAGTATTCTTTTATATATACCATGTTGCATCTTGTAGATACACCACAAATGAAAATTATTGTGATTATGCCGATGGTCAAGAAAGTTAACTTGTGATGATGTGTATAGAACAATAAGAACAACAAAATTAGAGTTGATATTCCCCAAAAAGATGAAGAATTATATTGTGTTTAGTATATAATATATGGATTCATCTACTATATATAGTATATATGGGCCAGGAGACGTGTCGTATACAACATTACACACTATGTAGGTGATTAGGTCATCTGTGCAAAGCATGCCCTGATTTGGTTATAATAGTTGGGATCACATTCCTTCCATATTAGTTTCATATTCATGAGCCTTCAAGAATAGAAATATTTTTATGTAGATTGAGATGAGTAGTTTTTTTTGCTATTGGGTTTAGTCAATGATTTGCTTAGTATAAGCTCATTTCTTTGGAGACCCAGTGTTTTTAGAAACAAAAAGTGCAAAAACGAGGTCTATTGGCTTGAGGCAAAAAGTGATAAGTGAAGGGCACACTTCTTTGGAATGAAGTGCATAATTTGAGAAATTTAGATAATAATCTATGACCCAGATGTTGCAAAAAGCTTGCAACTCATAGGTTGTTCGTGAACAATATTACCTCAAAAGCTCCAAATGACATGTTAAGGACTTAACATTTTACAACATTACCAGTTTTAAAAAAAGGTCTTCCATCGTAGGTATTCAAGATCCACTTTTCCCAAATTATGTATCAGTTTTTATTTTGGCACTCCCATAAATGTTTGTCATCCTCAAGATAAAAGTTAGTTGTATACCTTTGTTTTTATTCATGGTGTTAGTTGGAACATGTAAATGATGCTGAATCAGTTCTGCAGATGTTAGAAACCTTCGACCTTCAGGGTTAGATGGGATATATTCTCATTTGATTTTAACAGTGTACATATGTACATCACGTCCTCTGTGCTAAGTTTATTTCTAAAAGTTACTTCACTTTCTCCCAAACAAAAAACTCTCTTAAACGTTGGTTACACTTTTATAAACAATAATATTCGACATGCTTAATTTATAAAAACACACTACTTCTAAACACTCCTCATGTTGGTGATGTATCGTAGACTCATTAATTATCTTAAATACAATCATTAGACATTCTAATTATCAAACTCACTTTTGAATCATGATTTTGATGTTTTTCCTCTTAAATACATAGGTTAAATGAATTTGTTAAATTCTAAGCCTAGTCTTGACATGAAATGGGGCATACAATGGGATAGGGTGAGTGAGTACTAATGTGTTAATTCATGTCTGGCGATGTTAACTATTCTATTTTGGGACAAGCAACTGTTCCAGTCTAGTATCAATGTTTTATCCAATTTTTATGAAGATGTTTCGCCTGGGAAATCTCTGAATATTCTTTTCTTGCTTTAGTTCCAAGTTGTTGGCTGGTTTATAACAATTCCAAGTTTAGAATGTCTTGTCAGAATTACCTTTTGTGGGTTGAGCTTTGTAAATTTAGGTTTAACAAATCGGGAAAATATTATTAATTTTTTAATCTTCTTATTTAGTGATCGATACTCATATTGAAATTTAACTAATCTGAGTGTCTAATTTGGAAAAAGGGGCTAGAGGTGGAACATTTGATTTTTCAACTGCTAGGATTAAACCTTTTGGATTCTTGAATAGAGTCAATTGTTGTTGGAGAGATTTGAAGTTACAGTATTCTTATGTGAATAGATTCTAAGAGCTTTTTGTGTACTACTTTATCCTCTATTCTTTTGTGACAGCATCCCTATTATTTTATAAGAGCTGGTGTGAACTCAAGTTTATAAGATATTTCAACCAATATGTATTACATTAGTAGGAGCTGTCACCCTCCAACATCCGTCGCTTCTACTTACATATCTGATTCTGGAAGGCATGTATCTGGAAAATGTTTTTCCTTTTCCTCTTTATTGTACTTTGTACTAATTTACGTAATAGTAAACAAAAGTATTTTCTTCAAATGAATTTGAGACTGGGAGTGTTAATGTGAAGTTGCCCACATGAATTGTTAAAGATGAGAATACATCAATGAACTTGAAATTTACAAAATAAATGAAATGTTCTTTTGGTATATAAAGGATTTTATTACCAAAAGAGAATCTGTACAACACCTTGACATGATAATTTAGAATTGGACAACAAGTTCCAACTTCTAGAGTGACCTAATGCTCCTACTTTATTTTAATATTATCAAAATAGGAGCAGATGTGATATTTATTCAAGAAACAAAAATGGAAACTTTGACGAATAGAACTATTAGAAGTGTGTGTGTGTGTTGGGGCGGGGAGGGAGTAAGATTACTTTCTGGCACAGGACAGTGCAGGACAAATACTTATTCTTTGGGATGATAGGAAGGCGAGAGAACAGAAAGGAGGAGTATGTTGAGCTTAATAAGGGGGAGTTCATGTTAAGGGTGCAGTTTAGTTTTAAAATAGGGTGGAATGCAGTTTTCTTTGGAGAAGTTAGGGAATTGTATGGAAAAGAGGTGGGAGATCCCTTGGGTGTTAAAAAGGGATTTTTAACACTACAAGGGATCTTAGGAAGGGATTTTTAACACTATAAGATTCGCGGAGGAGAGGTTGGGTTACAGGCGATTTCCAGGGAAATGGAGGAATTCTTGCAGTTTTTAACCACCTTCTTATAGATTTACCTTTGATAGGTGCCAATTTCAACCAAGCATTATTCAATTCCCTCTCTTGTGGAGATCATTCACCTATTATGTTGGATGGTGTAGGGGTAGAAGGATGAGATCACTTTTCAAATTCGAGAACATGTGGCTGTGAGAGACAGACTTTGTAGATAGAGTAGCCGGGGCATAGAGGAGAGACCATCTTTCAGACTTGTAAAAAAGTAAAGATGCTTAAGAAAGACTTAAGATGTGGAATCAGAGGTAGTGTTTGGGAGGGTAGAGGTGAAAATGAGGGAGATTATGAATGAGGTGGGGGAATTAGAAAGAATACAGGTGGGAAGGAAGTTGGACAAAAGGGAAATGGAGAAAAAATAAATTTTAAAAATGGAATTAGCTTTAAGAGACTAGTTGGAGACAAAAATTGAGCTCGTTGGGGTCCGAGTATTGGTATTCTAACACAAGTTCTTTTGCAGGGTAATAGTTGCAAATAGGAGGAGAAATTTAATAGAGTGAGTAGAGTTGGGGGGAGATACATACATGTGGGAGAGGAAGAAGTAGGAAGAGCAGTTGTTCAATTCTATGAACAATTGTTCAAAGAGGAAGAAGAATGGAGGCCAATTAGATAGGAGTGGATAATAGTGAGCGGTAAGAGAGAAAAATTGACATAAGGGAGGTGCGTGAGGCAGTGGGGTGTTGTGCGGGCGACAAGGCTCGAGGTCTAGATGGTTTAACTTTTGTTTTCTTTCAGCATTGTTATACAGTCAGACATGATGAATTAAGTACTATTGACGAGTTTTAGGAGGGGTAGTTTCGGAAGGAGCTTAAATGCTTCTTTGATTGTAATTTTTACAAAGGAGGAAGAGACTTCTAGAATTGGGGACTACAAACCAATTGGTCTAGTTGGAAGCATCTACAAGATCATTTCTAAGGTGCTTTCTGATAGACTTAAAGAGAGTTTTTGCACGAGACTGTTTCGTTTTTGCAAAATGCTTTTGTTGATGGAAGGCAGATTTTGAATGCAGCTTTGGTGGATAATTAAGTGGTAGATTCGAGGGAGAAACAAGGTGAGTCGGGTGTTTTGTGCAAGTTAAATTTTGCTGAGTTCAATCAAGATCTAACTGTGCTAGTGGATTTTGACCTGTTGAAGTGCTCTTGCTTATATGTGGCAAGGTGCTTAACTAAATCTTATCCCAGTGAGATTTTTGTAATTGGAGATTCTCTTGAGTTAGTTATTTCATGAATCCTCCACTAATGTTTGGCGGATGTCTATTTTCGTCTAATGCTGAAGTTGTAGTATCCAGGAAATACTTGTCTCGTGTAAATGTGAGCTTCATTAAATTTTACTGAAATAAGACTTTACCTTCTAAGCTTGACATGAACCCTCTATTTGTTCTAATGCTGAATTGAGGATAAGATACACGGTAGAAGACCCGCCTTGCCACACCCTTAACCTCTAACCCTGTGCTTTTCTTGTAAAATTTATTTATTTATGTATAGAAGTTCAATTCCGTGCCTGTTTTCTATCCTTAACAAGTATCTTCATTCCAGGGTGTGGTGTTAATAATTCATAGTGTACACTTTTTTTTTTTTCCTTTTGGCTGCTGAAACTTGTCTTTATATGACAGAAAAGAAGATTGACGAGACTCCGAAGAAAAGTGTGTGCGCGTGTACCATAATGTGAGATTGTAAGTGATTCAAGTTTAATCCTGTGGTATTCTTGGGGGATAAACTGCTGCTGTGAAGTTCAGGGAAAACAGTATGATAGCTCATTGTTACTTGTTTGTTCGTTGAACGGCTATTCAATGTAACAGCGTGTCTATTTGTTTGAATGAATTTGGTAGGTGTACATTTTGTAATTGCAGATTTCTTATACAGAAATACAGAAAGTGTGCTGGATTGCATGCTATAGGATTTTACCGAGCT</genome_strand>
        <mrna_strand>CCATTTTAGCTGTGCGATTCAATGCAATCAAGCAGAAGAATCCTTGCTCTTTAATACACTG............................................................................................GTTTCGGAGGTGAAAAAACTGAGAAGAAAGAGGTTGGTGGGCGATCACAAATGCCGGAGGAAGATTTGACTGAAGTTAAGTTTCGTTTGTTCGATGGATCAGATGTGGGTCCATTTCAGTTCTCCCCGGCTTCAACCGTAGCTATGCTGAAAGAGAGAATTGTTGCTGAGTGGCCTAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGAAAATTGCACCTAAGGCGGCAAATGATGTCAAGTTGATAAGTGCTGGGAAAATTTTGGAGAACAACAAGACTGTTGGTCAATGTAAAACACCTTTCGGTGAACTACCTAATGGTGTGATTACCATGCATGCTGTTGTACAGCCATCAGTAGGTAAATCAAAATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAAGATTGACGAGACTCCGAAGAAAAGTGTGTGCGCGTGTACCATAATGTGAGATTGTAAGTGATTCAAGTTTAATCCTGTGGTATTCTTGGGGGATAAACTGCTGCTGTGAAGTTCAGGGAAAACAGTATGATAGCTCATTGTTACTTGTTTGTTCGTTGAACGGCTATTNCATGTAACAGCGTGTCTATTTGTTTG-ATGAATTTGGTAGGTGTACATTTTGTAATTGCAGATTTCTTATACAGAAATACAGAAAGTGTGCTGGATTGCATGCTATAGGATTTTACCGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E328020" ref_strand="+" ref_description="SGN-E328020 [cTOC-22-M13]">
      <seq>ccattttagctgtgcgattcaatgcaatcaagcagaagaatccttgctctttaatacactggtttcggaggtgaaaaaactgagaagaaagaggttggtgggcgatcacaaatgccggaggaagatttgactgaagttaagtttcgtttgttcgatggatcagatgtgggtccatttcagttctccccggcttcaaccgtagctatgctgaaagagagaattgttgctgagtggcctaaagataagaaaattgcacctaaggcggcaaatgatgtcaagttgataagtgctgggaaaattttggagaacaacaagactgttggtcaatgtaaaacacctttcggtgaactacctaatggtgtgattaccatgcatgctgttgtacagccatcagtaggtaaatcaaaatcagaaaagaagattgacgagactccgaagaaaagtgtgtgcgcgtgtaccataatgtgagattgtaagtgattcaagtttaatcctgtggtattcttgggggataaactgctgctgtgaagttcagggaaaacagtatgatagctcattgttacttgtttgttcgttgaacggctattncatgtaacagcgtgtctatttgtttgaatgaatttggtaggtgtacattttgtaattgcagatttcttatacagaaatacagaaagtgtgctggattgcatgctataggattttaccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="81479" stop="72736"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81179" g_stop="81119" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81118" i_stop="81027" i_length="92">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81026" g_stop="80847" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="241" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80846" i_stop="78868" i_length="1979">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78867" g_stop="78697" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="412" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78696" i_stop="73330" i_length="5367">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73329" g_stop="73036" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="706" r_length="294" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E328020" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E328020" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81179" e_stop="81119"/>
          <exon e_start="81026" e_stop="80847"/>
          <exon e_start="78867" e_stop="78697"/>
          <exon e_start="73329" e_stop="73036"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATTTTAGCTGTGCGATTCAATGCAATCAAGCAGAAGAATCCTTGCTCTTTAATACACTGGTAAACTTGTTTATTCACGTTGCTTATATATATATATTTGCTTCTCATCTCGCTTTTTTCTGACTGTTAAGCTGTTTGTCTCTGCGATTTAGGTTTCGGAGGTGAAAAAACTGAGAAGAAAGAGGTTGGTGGGCGATCACAAATGCCGGAGGAAGATTTGACTGAAGTTAAGTTTCGTTTGTTCGATGGATCAGATGTGGGTCCATTTCAGTTCTCCCCGGCTTCAACCGTAGCTATGCTGAAAGAGAGAATTGTTGCTGAGTGGCCTAAAGGTTAGTAAAATTACGTCATTTTTGTTAGTTTTTGGAGGCTTGCGTTGCATAATTGAGATGTTTTTGGTTGAGTTCTGTTAATTGTTTATGGAAATGGGGAAACAGGGTTTGATGAGAATACCCATAAATTTAATGACACTTAGCACCCTAAGAAACAGTATTCAGTACCTCATCAGCCTCCAACCCAAATAAATGTTTGAAAGAAATGTTTTTTGTTTGCATTTTTGGGGCTTTTAGTTGGGGTTTTGGTGATCAAGGGATGGATCTTTTAATCTGAGATTTTGATTGATAAGGCTAAAATGAAAATGGACTAAAGTTCACATCAAATAGCTAAAGAGATTTTTGTCATGTTAACTTTCGATACCAAACACACTTGTATGCAAAATGATGAGCAGAATACCTAGCTAGGCCAAATCCCTGTGGCACTCCTATCCAACACGGTAATCCTTAATACACTGAACCTTTTGAAAGAGTCTAACAAGCAACACCACTTTCGCAACGTGCACAAAATAGGTGTGTTGTGCCTGTGTGAATTTTGTCCCAGCCCATATTTGATATTCCTATCCCCATAGAACCCCTCCTCCCCTTTCTCCCACACAGGAGATACAAAATTTCAGATACGAAAATTGAGTGCTTGTTGTTCAAATCTTGTGGAATCGGTTATATTGTGAGACTTACAAGCTTTAAGACTGATTTTTGTGAAGGTTGGGTGGAAAAATTAAGGAATCTACCATTGTTGGGCATTTTTTTAGATGAAGTAATAGATTTCACCTTCCATTGTTGGGCATTGAGAAAACTTGAAAATACAACTGGGTCTTGTTGACTTTTGAGTTGTGCTCAATTCATTTGGGGTTTAATTAAATAGTTTTTTATGGAAACTTTCTCATGGACAACCATGGTGGTGGCAGCCATGATCAATTAAATGTTAATGACATGTGTCACGACCATATTAGGGCCTGACATACACATCGTTTTGATAACTGGCCAAGCACAGAAGTGGTGTGTAAAAGATACTTTGAAAAGATTGGCTGTGTAAAAGGTTATTCGTATTGGCCAAAGGTCTCTGATTGTTCTCCATACCTCAACCCCATAGTTAGCTAACATCTTTAACTGCTTCTACATCTAATTCAGAAATCTAAAATGATTTTTGAATTAACACTAAGTGATGCAGTAGAACAGATGATATCTGGGTCTGAATCCTGAGAATGGAGAAATCTCTTTTAGGGAATGCCTAATCTCAATGAACTTTTGTGGCGTGAATTTGGATTAATTGGACAAGTGGATTCTAAGTACCTCATGTTTAACAAAAAAATTATTTTTGTGTTTGATTGACATGATTTTTACTTTATATATTTCGTTTAATTTTACGTTGTTTAGTTTGTTTGTCCAGTTAATCATTTTCTTTGTTTAATAGTTATTTTTTCTTACATTAGGTAGTTGTATTGTGCATGCGCACACACGTATAGAGATAGGTGGGACTTGTGAGGTTGTGAGCAACAAGTTTCAAAGAACTTATAATTTGCCTTGTTAGACAAATTATATAGTGTTGTAATTAATTGGTCTAATATGGAGATTGATAAAGAGGATTTTAGCCAATTTCAATTAACTTAGAGTTTGAAGCACAACTTTTTGATAATTTAACTTTTGTTAAAGAGCTTTAGTTCAGTATTTTTAAGTCAACCAAATTGTACCAAAATCCAAGCCCAATTCATACTGGACGAATGAACATAATCAAATCAGTATAAGAATTTTGTTTGAGGAGTATTGGTTATGAGCTGCAATTGGCTATCCCTATTTTTCTTTATGCCATCCAGAAAAGTCTATTGATATCTAAATCCTTTAAAGCCTTTAATGTTTGACAGATCTTCATTTTATTAACTTACTATAAACTATATATTCAGGAAATTGGGAAAGGGTTATTATTTATTTCTATGTGGCCTCTAATTTCCTGAGATTAAGTTGTGATGCTCTCTTGGCAGATAAGAAAATTGCACCTAAGGCGGCAAATGATGTCAAGTTGATAAGTGCTGGGAAAATTTTGGAGAACAACAAGACTGTTGGTCAATGTAAAACACCTTTCGGTGAACTACCTAATGGTGTGATTACCATGCATGCTGTTGTACAGCCATCAGTAGGTAAATCAAAATCAGGTGGGTTCCTCTTACTTGATTTGTGGTAATAGACACTGGTTTTACCCTTTCTGTAATGTATTTATATTTTTTGAGGCTATTGGTGATTCTGTTACTGTGTGTTCAGGAAAAAATAAGGACAAGAATCTTCTTCATCTTCTTAATATCTTAATTGTCATGCAATATAGTTAACTGGTTGGTTGTATGTACCTTATTTTTAACATGGTAATGCTTTTAATGTCTATGCCTCTATGGTTCTTTACATTTTGCCTTACAAAGAAATTTATGTGGTATGTGTTAAAATTCCAGATGATTGCAAGGGCTCGTGCCCAGGGACCATTTTCAGATGTATGTTGTATTAATTGCAGTGGTTCATATGGTATACTGAATATTTTAGCTTATGTAACAGAAAGTATGAAGTTAGAATCGTGTTTCAACCCCGTCATATGCAAGATAGTATTAACTCTTCAAGTGATGGAGACTCAGTTTCTGTATTTTCATGTCTTAGCTTGCATGTCAGGTCTTCATTTTAGAAGAGATCAAAAGGGTTACTATAAATTCAAGTGTCTATCATAAACTGTAACAATAAAAAAGGAGTGCTGCAGGTTGCATTACCTTAAGTTCTAGTTGATAACCTAAACCTAGCTTATGTCTTAAAGTATAGGGTTTTATCTGATTCATAATCCACATATGAAGAGTTGCTCCAAACAAATTACTAAACATATTTAAGTTAAACGTAACTAGGTTGATCTACCACTGAATATCAACTATGATTACTTATCCTGACACCATCGTAATTAATATGAGCTTTCAATTAAGAACATACTTAATCAAATCTGATTTCACCTAATTTAGTGAGGATTGCATTTAAAAAATGTTACTCTGTCTATATTAGTGTCGAAGTGCGGAATTTAAGAAAACAACCTTTGAATCTTGTAATCATAAACTAAGGATATTCGTAATGTGCCAAATTGCCCATTGAATCCCGTGGTTTTAGACAAGCGAAGTAGAGTTTTGGAATTAGAGAGTCACCTACTTTAAAAAGAGACTTTCTTTTTGAAATAGACTAAAAAGGGAAGTAAGGTACTTGAGTTGAAACGGGGGAAGTATTCTTTTATATATACCATGTTGCATCTTGTAGATACACCACAAATGAAAATTATTGTGATTATGCCGATGGTCAAGAAAGTTAACTTGTGATGATGTGTATAGAACAATAAGAACAACAAAATTAGAGTTGATATTCCCCAAAAAGATGAAGAATTATATTGTGTTTAGTATATAATATATGGATTCATCTACTATATATAGTATATATGGGCCAGGAGACGTGTCGTATACAACATTACACACTATGTAGGTGATTAGGTCATCTGTGCAAAGCATGCCCTGATTTGGTTATAATAGTTGGGATCACATTCCTTCCATATTAGTTTCATATTCATGAGCCTTCAAGAATAGAAATATTTTTATGTAGATTGAGATGAGTAGTTTTTTTTGCTATTGGGTTTAGTCAATGATTTGCTTAGTATAAGCTCATTTCTTTGGAGACCCAGTGTTTTTAGAAACAAAAAGTGCAAAAACGAGGTCTATTGGCTTGAGGCAAAAAGTGATAAGTGAAGGGCACACTTCTTTGGAATGAAGTGCATAATTTGAGAAATTTAGATAATAATCTATGACCCAGATGTTGCAAAAAGCTTGCAACTCATAGGTTGTTCGTGAACAATATTACCTCAAAAGCTCCAAATGACATGTTAAGGACTTAACATTTTACAACATTACCAGTTTTAAAAAAAGGTCTTCCATCGTAGGTATTCAAGATCCACTTTTCCCAAATTATGTATCAGTTTTTATTTTGGCACTCCCATAAATGTTTGTCATCCTCAAGATAAAAGTTAGTTGTATACCTTTGTTTTTATTCATGGTGTTAGTTGGAACATGTAAATGATGCTGAATCAGTTCTGCAGATGTTAGAAACCTTCGACCTTCAGGGTTAGATGGGATATATTCTCATTTGATTTTAACAGTGTACATATGTACATCACGTCCTCTGTGCTAAGTTTATTTCTAAAAGTTACTTCACTTTCTCCCAAACAAAAAACTCTCTTAAACGTTGGTTACACTTTTATAAACAATAATATTCGACATGCTTAATTTATAAAAACACACTACTTCTAAACACTCCTCATGTTGGTGATGTATCGTAGACTCATTAATTATCTTAAATACAATCATTAGACATTCTAATTATCAAACTCACTTTTGAATCATGATTTTGATGTTTTTCCTCTTAAATACATAGGTTAAATGAATTTGTTAAATTCTAAGCCTAGTCTTGACATGAAATGGGGCATACAATGGGATAGGGTGAGTGAGTACTAATGTGTTAATTCATGTCTGGCGATGTTAACTATTCTATTTTGGGACAAGCAACTGTTCCAGTCTAGTATCAATGTTTTATCCAATTTTTATGAAGATGTTTCGCCTGGGAAATCTCTGAATATTCTTTTCTTGCTTTAGTTCCAAGTTGTTGGCTGGTTTATAACAATTCCAAGTTTAGAATGTCTTGTCAGAATTACCTTTTGTGGGTTGAGCTTTGTAAATTTAGGTTTAACAAATCGGGAAAATATTATTAATTTTTTAATCTTCTTATTTAGTGATCGATACTCATATTGAAATTTAACTAATCTGAGTGTCTAATTTGGAAAAAGGGGCTAGAGGTGGAACATTTGATTTTTCAACTGCTAGGATTAAACCTTTTGGATTCTTGAATAGAGTCAATTGTTGTTGGAGAGATTTGAAGTTACAGTATTCTTATGTGAATAGATTCTAAGAGCTTTTTGTGTACTACTTTATCCTCTATTCTTTTGTGACAGCATCCCTATTATTTTATAAGAGCTGGTGTGAACTCAAGTTTATAAGATATTTCAACCAATATGTATTACATTAGTAGGAGCTGTCACCCTCCAACATCCGTCGCTTCTACTTACATATCTGATTCTGGAAGGCATGTATCTGGAAAATGTTTTTCCTTTTCCTCTTTATTGTACTTTGTACTAATTTACGTAATAGTAAACAAAAGTATTTTCTTCAAATGAATTTGAGACTGGGAGTGTTAATGTGAAGTTGCCCACATGAATTGTTAAAGATGAGAATACATCAATGAACTTGAAATTTACAAAATAAATGAAATGTTCTTTTGGTATATAAAGGATTTTATTACCAAAAGAGAATCTGTACAACACCTTGACATGATAATTTAGAATTGGACAACAAGTTCCAACTTCTAGAGTGACCTAATGCTCCTACTTTATTTTAATATTATCAAAATAGGAGCAGATGTGATATTTATTCAAGAAACAAAAATGGAAACTTTGACGAATAGAACTATTAGAAGTGTGTGTGTGTGTTGGGGCGGGGAGGGAGTAAGATTACTTTCTGGCACAGGACAGTGCAGGACAAATACTTATTCTTTGGGATGATAGGAAGGCGAGAGAACAGAAAGGAGGAGTATGTTGAGCTTAATAAGGGGGAGTTCATGTTAAGGGTGCAGTTTAGTTTTAAAATAGGGTGGAATGCAGTTTTCTTTGGAGAAGTTAGGGAATTGTATGGAAAAGAGGTGGGAGATCCCTTGGGTGTTAAAAAGGGATTTTTAACACTACAAGGGATCTTAGGAAGGGATTTTTAACACTATAAGATTCGCGGAGGAGAGGTTGGGTTACAGGCGATTTCCAGGGAAATGGAGGAATTCTTGCAGTTTTTAACCACCTTCTTATAGATTTACCTTTGATAGGTGCCAATTTCAACCAAGCATTATTCAATTCCCTCTCTTGTGGAGATCATTCACCTATTATGTTGGATGGTGTAGGGGTAGAAGGATGAGATCACTTTTCAAATTCGAGAACATGTGGCTGTGAGAGACAGACTTTGTAGATAGAGTAGCCGGGGCATAGAGGAGAGACCATCTTTCAGACTTGTAAAAAAGTAAAGATGCTTAAGAAAGACTTAAGATGTGGAATCAGAGGTAGTGTTTGGGAGGGTAGAGGTGAAAATGAGGGAGATTATGAATGAGGTGGGGGAATTAGAAAGAATACAGGTGGGAAGGAAGTTGGACAAAAGGGAAATGGAGAAAAAATAAATTTTAAAAATGGAATTAGCTTTAAGAGACTAGTTGGAGACAAAAATTGAGCTCGTTGGGGTCCGAGTATTGGTATTCTAACACAAGTTCTTTTGCAGGGTAATAGTTGCAAATAGGAGGAGAAATTTAATAGAGTGAGTAGAGTTGGGGGGAGATACATACATGTGGGAGAGGAAGAAGTAGGAAGAGCAGTTGTTCAATTCTATGAACAATTGTTCAAAGAGGAAGAAGAATGGAGGCCAATTAGATAGGAGTGGATAATAGTGAGCGGTAAGAGAGAAAAATTGACATAAGGGAGGTGCGTGAGGCAGTGGGGTGTTGTGCGGGCGACAAGGCTCGAGGTCTAGATGGTTTAACTTTTGTTTTCTTTCAGCATTGTTATACAGTCAGACATGATGAATTAAGTACTATTGACGAGTTTTAGGAGGGGTAGTTTCGGAAGGAGCTTAAATGCTTCTTTGATTGTAATTTTTACAAAGGAGGAAGAGACTTCTAGAATTGGGGACTACAAACCAATTGGTCTAGTTGGAAGCATCTACAAGATCATTTCTAAGGTGCTTTCTGATAGACTTAAAGAGAGTTTTTGCACGAGACTGTTTCGTTTTTGCAAAATGCTTTTGTTGATGGAAGGCAGATTTTGAATGCAGCTTTGGTGGATAATTAAGTGGTAGATTCGAGGGAGAAACAAGGTGAGTCGGGTGTTTTGTGCAAGTTAAATTTTGCTGAGTTCAATCAAGATCTAACTGTGCTAGTGGATTTTGACCTGTTGAAGTGCTCTTGCTTATATGTGGCAAGGTGCTTAACTAAATCTTATCCCAGTGAGATTTTTGTAATTGGAGATTCTCTTGAGTTAGTTATTTCATGAATCCTCCACTAATGTTTGGCGGATGTCTATTTTCGTCTAATGCTGAAGTTGTAGTATCCAGGAAATACTTGTCTCGTGTAAATGTGAGCTTCATTAAATTTTACTGAAATAAGACTTTACCTTCTAAGCTTGACATGAACCCTCTATTTGTTCTAATGCTGAATTGAGGATAAGATACACGGTAGAAGACCCGCCTTGCCACACCCTTAACCTCTAACCCTGTGCTTTTCTTGTAAAATTTATTTATTTATGTATAGAAGTTCAATTCCGTGCCTGTTTTCTATCCTTAACAAGTATCTTCATTCCAGGGTGTGGTGTTAATAATTCATAGTGTACACTTTTTTTTTTTTCCTTTTGGCTGCTGAAACTTGTCTTTATATGACAGAAAAGAAGATTGACGAGACTCCGAAGAAAAGTGTGTGCGCGTGTACCATAATGTGAGATTGTAAGTGATTCAAGTTTAATCCTGTGGTATTCTTGGGGGATAAACTGCTGCTGTGAAGTTCAGGGAAAACAGTATGATAGCTCATTGTTACTTGTTTGTTCGTTGAACGGCTATTCAATGTAACAGCGTGTCTATTTGTTTGAATGAATTTGGTAGGTGTACATTTTGTAATTGCAGATTTCTTATACAGAAATACAGAAAGTGTGCTGGATTGCATGCTATAGGATTTTACCG</genome_strand>
        <mrna_strand>CCATTTTAGCTGTGCGATTCAATGCAATCAAGCAGAAGAATCCTTGCTCTTTAATACACTG............................................................................................GTTTCGGAGGTGAAAAAACTGAGAAGAAAGAGGTTGGTGGGCGATCACAAATGCCGGAGGAAGATTTGACTGAAGTTAAGTTTCGTTTGTTCGATGGATCAGATGTGGGTCCATTTCAGTTCTCCCCGGCTTCAACCGTAGCTATGCTGAAAGAGAGAATTGTTGCTGAGTGGCCTAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGAAAATTGCACCTAAGGCGGCAAATGATGTCAAGTTGATAAGTGCTGGGAAAATTTTGGAGAACAACAAGACTGTTGGTCAATGTAAAACACCTTTCGGTGAACTACCTAATGGTGTGATTACCATGCATGCTGTTGTACAGCCATCAGTAGGTAAATCAAAATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAAGATTGACGAGACTCCGAAGAAAAGTGTGTGCGCGTGTACCATAATGTGAGATTGTAAGTGATTCAAGTTTAATCCTGTGGTATTCTTGGGGGATAAACTGCTGCTGTGAAGTTCAGGGAAAACAGTATGATAGCTCATTGTTACTTGTTTGTTCGTTGAACGGCTATTNCATGTAACAGCGTGTCTATTTGTTTGAATGAATTTGGTAGGTGTACATTTTGTAATTGCAGATTTCTTATACAGAAATACAGAAAGTGTGCTGGATTGCATGCTATAGGATTTTACCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E342310" ref_strand="+" ref_description="SGN-E342310 [cTOF-8-O10]">
      <seq>gttcccccattttagctgtgcgattcaatgcaatcaagcagaagaatccttgctctttaatacactggtttcggaggtgaaaaaactgagaagaaagaggttggtgggcgatcacaaatgccggaggaagatttgactgaagttaagtttcgtttgttcgatggatcagatgtgggtccatttcagttctccccggcttcaaccgtagctatgctgaaagagagaattgttgctgagtggcctaaagataagaaaattgcacctaaggcggcaaatgatgtcaagttgataagtgctgggaaaattttggagaacaacaagactgttggtcaatgtaaaacacctttcggtgaactacctaatggtgtgattaccatgcatgctgttgtacagccatcagtaggtaaatcaaaatcagaaaagaagattgacgagactccgaagaaaagtgtgtgcgcgtgtaccataatgtgagattgtaagtgattcaagtttaatcctgtggtattcttgggggataaactgctgctgtgaagttcagggaaaacagtatgatagctcattgttacttgtttgttcgttgaacggctattcaatgtaacagcgtgtctacttgtttgaatgaatttggtaggtgtacattttgtaattgcagatttcttatacagaaatcagnaaagtgtgctggattgcatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="81485" stop="72751"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81185" g_stop="81119" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="67" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81118" i_stop="81027" i_length="92">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81026" g_stop="80847" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="247" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80846" i_stop="78868" i_length="1979">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78867" g_stop="78697" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="418" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78696" i_stop="73330" i_length="5367">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73329" g_stop="73051" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="697" r_length="279" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E342310" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E342310" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81185" e_stop="81119"/>
          <exon e_start="81026" e_stop="80847"/>
          <exon e_start="78867" e_stop="78697"/>
          <exon e_start="73329" e_stop="73051"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCCCCCATTTTAGCTGTGCGATTCAATGCAATCAAGCAGAAGAATCCTTGCTCTTTAATACACTGGTAAACTTGTTTATTCACGTTGCTTATATATATATATTTGCTTCTCATCTCGCTTTTTTCTGACTGTTAAGCTGTTTGTCTCTGCGATTTAGGTTTCGGAGGTGAAAAAACTGAGAAGAAAGAGGTTGGTGGGCGATCACAAATGCCGGAGGAAGATTTGACTGAAGTTAAGTTTCGTTTGTTCGATGGATCAGATGTGGGTCCATTTCAGTTCTCCCCGGCTTCAACCGTAGCTATGCTGAAAGAGAGAATTGTTGCTGAGTGGCCTAAAGGTTAGTAAAATTACGTCATTTTTGTTAGTTTTTGGAGGCTTGCGTTGCATAATTGAGATGTTTTTGGTTGAGTTCTGTTAATTGTTTATGGAAATGGGGAAACAGGGTTTGATGAGAATACCCATAAATTTAATGACACTTAGCACCCTAAGAAACAGTATTCAGTACCTCATCAGCCTCCAACCCAAATAAATGTTTGAAAGAAATGTTTTTTGTTTGCATTTTTGGGGCTTTTAGTTGGGGTTTTGGTGATCAAGGGATGGATCTTTTAATCTGAGATTTTGATTGATAAGGCTAAAATGAAAATGGACTAAAGTTCACATCAAATAGCTAAAGAGATTTTTGTCATGTTAACTTTCGATACCAAACACACTTGTATGCAAAATGATGAGCAGAATACCTAGCTAGGCCAAATCCCTGTGGCACTCCTATCCAACACGGTAATCCTTAATACACTGAACCTTTTGAAAGAGTCTAACAAGCAACACCACTTTCGCAACGTGCACAAAATAGGTGTGTTGTGCCTGTGTGAATTTTGTCCCAGCCCATATTTGATATTCCTATCCCCATAGAACCCCTCCTCCCCTTTCTCCCACACAGGAGATACAAAATTTCAGATACGAAAATTGAGTGCTTGTTGTTCAAATCTTGTGGAATCGGTTATATTGTGAGACTTACAAGCTTTAAGACTGATTTTTGTGAAGGTTGGGTGGAAAAATTAAGGAATCTACCATTGTTGGGCATTTTTTTAGATGAAGTAATAGATTTCACCTTCCATTGTTGGGCATTGAGAAAACTTGAAAATACAACTGGGTCTTGTTGACTTTTGAGTTGTGCTCAATTCATTTGGGGTTTAATTAAATAGTTTTTTATGGAAACTTTCTCATGGACAACCATGGTGGTGGCAGCCATGATCAATTAAATGTTAATGACATGTGTCACGACCATATTAGGGCCTGACATACACATCGTTTTGATAACTGGCCAAGCACAGAAGTGGTGTGTAAAAGATACTTTGAAAAGATTGGCTGTGTAAAAGGTTATTCGTATTGGCCAAAGGTCTCTGATTGTTCTCCATACCTCAACCCCATAGTTAGCTAACATCTTTAACTGCTTCTACATCTAATTCAGAAATCTAAAATGATTTTTGAATTAACACTAAGTGATGCAGTAGAACAGATGATATCTGGGTCTGAATCCTGAGAATGGAGAAATCTCTTTTAGGGAATGCCTAATCTCAATGAACTTTTGTGGCGTGAATTTGGATTAATTGGACAAGTGGATTCTAAGTACCTCATGTTTAACAAAAAAATTATTTTTGTGTTTGATTGACATGATTTTTACTTTATATATTTCGTTTAATTTTACGTTGTTTAGTTTGTTTGTCCAGTTAATCATTTTCTTTGTTTAATAGTTATTTTTTCTTACATTAGGTAGTTGTATTGTGCATGCGCACACACGTATAGAGATAGGTGGGACTTGTGAGGTTGTGAGCAACAAGTTTCAAAGAACTTATAATTTGCCTTGTTAGACAAATTATATAGTGTTGTAATTAATTGGTCTAATATGGAGATTGATAAAGAGGATTTTAGCCAATTTCAATTAACTTAGAGTTTGAAGCACAACTTTTTGATAATTTAACTTTTGTTAAAGAGCTTTAGTTCAGTATTTTTAAGTCAACCAAATTGTACCAAAATCCAAGCCCAATTCATACTGGACGAATGAACATAATCAAATCAGTATAAGAATTTTGTTTGAGGAGTATTGGTTATGAGCTGCAATTGGCTATCCCTATTTTTCTTTATGCCATCCAGAAAAGTCTATTGATATCTAAATCCTTTAAAGCCTTTAATGTTTGACAGATCTTCATTTTATTAACTTACTATAAACTATATATTCAGGAAATTGGGAAAGGGTTATTATTTATTTCTATGTGGCCTCTAATTTCCTGAGATTAAGTTGTGATGCTCTCTTGGCAGATAAGAAAATTGCACCTAAGGCGGCAAATGATGTCAAGTTGATAAGTGCTGGGAAAATTTTGGAGAACAACAAGACTGTTGGTCAATGTAAAACACCTTTCGGTGAACTACCTAATGGTGTGATTACCATGCATGCTGTTGTACAGCCATCAGTAGGTAAATCAAAATCAGGTGGGTTCCTCTTACTTGATTTGTGGTAATAGACACTGGTTTTACCCTTTCTGTAATGTATTTATATTTTTTGAGGCTATTGGTGATTCTGTTACTGTGTGTTCAGGAAAAAATAAGGACAAGAATCTTCTTCATCTTCTTAATATCTTAATTGTCATGCAATATAGTTAACTGGTTGGTTGTATGTACCTTATTTTTAACATGGTAATGCTTTTAATGTCTATGCCTCTATGGTTCTTTACATTTTGCCTTACAAAGAAATTTATGTGGTATGTGTTAAAATTCCAGATGATTGCAAGGGCTCGTGCCCAGGGACCATTTTCAGATGTATGTTGTATTAATTGCAGTGGTTCATATGGTATACTGAATATTTTAGCTTATGTAACAGAAAGTATGAAGTTAGAATCGTGTTTCAACCCCGTCATATGCAAGATAGTATTAACTCTTCAAGTGATGGAGACTCAGTTTCTGTATTTTCATGTCTTAGCTTGCATGTCAGGTCTTCATTTTAGAAGAGATCAAAAGGGTTACTATAAATTCAAGTGTCTATCATAAACTGTAACAATAAAAAAGGAGTGCTGCAGGTTGCATTACCTTAAGTTCTAGTTGATAACCTAAACCTAGCTTATGTCTTAAAGTATAGGGTTTTATCTGATTCATAATCCACATATGAAGAGTTGCTCCAAACAAATTACTAAACATATTTAAGTTAAACGTAACTAGGTTGATCTACCACTGAATATCAACTATGATTACTTATCCTGACACCATCGTAATTAATATGAGCTTTCAATTAAGAACATACTTAATCAAATCTGATTTCACCTAATTTAGTGAGGATTGCATTTAAAAAATGTTACTCTGTCTATATTAGTGTCGAAGTGCGGAATTTAAGAAAACAACCTTTGAATCTTGTAATCATAAACTAAGGATATTCGTAATGTGCCAAATTGCCCATTGAATCCCGTGGTTTTAGACAAGCGAAGTAGAGTTTTGGAATTAGAGAGTCACCTACTTTAAAAAGAGACTTTCTTTTTGAAATAGACTAAAAAGGGAAGTAAGGTACTTGAGTTGAAACGGGGGAAGTATTCTTTTATATATACCATGTTGCATCTTGTAGATACACCACAAATGAAAATTATTGTGATTATGCCGATGGTCAAGAAAGTTAACTTGTGATGATGTGTATAGAACAATAAGAACAACAAAATTAGAGTTGATATTCCCCAAAAAGATGAAGAATTATATTGTGTTTAGTATATAATATATGGATTCATCTACTATATATAGTATATATGGGCCAGGAGACGTGTCGTATACAACATTACACACTATGTAGGTGATTAGGTCATCTGTGCAAAGCATGCCCTGATTTGGTTATAATAGTTGGGATCACATTCCTTCCATATTAGTTTCATATTCATGAGCCTTCAAGAATAGAAATATTTTTATGTAGATTGAGATGAGTAGTTTTTTTTGCTATTGGGTTTAGTCAATGATTTGCTTAGTATAAGCTCATTTCTTTGGAGACCCAGTGTTTTTAGAAACAAAAAGTGCAAAAACGAGGTCTATTGGCTTGAGGCAAAAAGTGATAAGTGAAGGGCACACTTCTTTGGAATGAAGTGCATAATTTGAGAAATTTAGATAATAATCTATGACCCAGATGTTGCAAAAAGCTTGCAACTCATAGGTTGTTCGTGAACAATATTACCTCAAAAGCTCCAAATGACATGTTAAGGACTTAACATTTTACAACATTACCAGTTTTAAAAAAAGGTCTTCCATCGTAGGTATTCAAGATCCACTTTTCCCAAATTATGTATCAGTTTTTATTTTGGCACTCCCATAAATGTTTGTCATCCTCAAGATAAAAGTTAGTTGTATACCTTTGTTTTTATTCATGGTGTTAGTTGGAACATGTAAATGATGCTGAATCAGTTCTGCAGATGTTAGAAACCTTCGACCTTCAGGGTTAGATGGGATATATTCTCATTTGATTTTAACAGTGTACATATGTACATCACGTCCTCTGTGCTAAGTTTATTTCTAAAAGTTACTTCACTTTCTCCCAAACAAAAAACTCTCTTAAACGTTGGTTACACTTTTATAAACAATAATATTCGACATGCTTAATTTATAAAAACACACTACTTCTAAACACTCCTCATGTTGGTGATGTATCGTAGACTCATTAATTATCTTAAATACAATCATTAGACATTCTAATTATCAAACTCACTTTTGAATCATGATTTTGATGTTTTTCCTCTTAAATACATAGGTTAAATGAATTTGTTAAATTCTAAGCCTAGTCTTGACATGAAATGGGGCATACAATGGGATAGGGTGAGTGAGTACTAATGTGTTAATTCATGTCTGGCGATGTTAACTATTCTATTTTGGGACAAGCAACTGTTCCAGTCTAGTATCAATGTTTTATCCAATTTTTATGAAGATGTTTCGCCTGGGAAATCTCTGAATATTCTTTTCTTGCTTTAGTTCCAAGTTGTTGGCTGGTTTATAACAATTCCAAGTTTAGAATGTCTTGTCAGAATTACCTTTTGTGGGTTGAGCTTTGTAAATTTAGGTTTAACAAATCGGGAAAATATTATTAATTTTTTAATCTTCTTATTTAGTGATCGATACTCATATTGAAATTTAACTAATCTGAGTGTCTAATTTGGAAAAAGGGGCTAGAGGTGGAACATTTGATTTTTCAACTGCTAGGATTAAACCTTTTGGATTCTTGAATAGAGTCAATTGTTGTTGGAGAGATTTGAAGTTACAGTATTCTTATGTGAATAGATTCTAAGAGCTTTTTGTGTACTACTTTATCCTCTATTCTTTTGTGACAGCATCCCTATTATTTTATAAGAGCTGGTGTGAACTCAAGTTTATAAGATATTTCAACCAATATGTATTACATTAGTAGGAGCTGTCACCCTCCAACATCCGTCGCTTCTACTTACATATCTGATTCTGGAAGGCATGTATCTGGAAAATGTTTTTCCTTTTCCTCTTTATTGTACTTTGTACTAATTTACGTAATAGTAAACAAAAGTATTTTCTTCAAATGAATTTGAGACTGGGAGTGTTAATGTGAAGTTGCCCACATGAATTGTTAAAGATGAGAATACATCAATGAACTTGAAATTTACAAAATAAATGAAATGTTCTTTTGGTATATAAAGGATTTTATTACCAAAAGAGAATCTGTACAACACCTTGACATGATAATTTAGAATTGGACAACAAGTTCCAACTTCTAGAGTGACCTAATGCTCCTACTTTATTTTAATATTATCAAAATAGGAGCAGATGTGATATTTATTCAAGAAACAAAAATGGAAACTTTGACGAATAGAACTATTAGAAGTGTGTGTGTGTGTTGGGGCGGGGAGGGAGTAAGATTACTTTCTGGCACAGGACAGTGCAGGACAAATACTTATTCTTTGGGATGATAGGAAGGCGAGAGAACAGAAAGGAGGAGTATGTTGAGCTTAATAAGGGGGAGTTCATGTTAAGGGTGCAGTTTAGTTTTAAAATAGGGTGGAATGCAGTTTTCTTTGGAGAAGTTAGGGAATTGTATGGAAAAGAGGTGGGAGATCCCTTGGGTGTTAAAAAGGGATTTTTAACACTACAAGGGATCTTAGGAAGGGATTTTTAACACTATAAGATTCGCGGAGGAGAGGTTGGGTTACAGGCGATTTCCAGGGAAATGGAGGAATTCTTGCAGTTTTTAACCACCTTCTTATAGATTTACCTTTGATAGGTGCCAATTTCAACCAAGCATTATTCAATTCCCTCTCTTGTGGAGATCATTCACCTATTATGTTGGATGGTGTAGGGGTAGAAGGATGAGATCACTTTTCAAATTCGAGAACATGTGGCTGTGAGAGACAGACTTTGTAGATAGAGTAGCCGGGGCATAGAGGAGAGACCATCTTTCAGACTTGTAAAAAAGTAAAGATGCTTAAGAAAGACTTAAGATGTGGAATCAGAGGTAGTGTTTGGGAGGGTAGAGGTGAAAATGAGGGAGATTATGAATGAGGTGGGGGAATTAGAAAGAATACAGGTGGGAAGGAAGTTGGACAAAAGGGAAATGGAGAAAAAATAAATTTTAAAAATGGAATTAGCTTTAAGAGACTAGTTGGAGACAAAAATTGAGCTCGTTGGGGTCCGAGTATTGGTATTCTAACACAAGTTCTTTTGCAGGGTAATAGTTGCAAATAGGAGGAGAAATTTAATAGAGTGAGTAGAGTTGGGGGGAGATACATACATGTGGGAGAGGAAGAAGTAGGAAGAGCAGTTGTTCAATTCTATGAACAATTGTTCAAAGAGGAAGAAGAATGGAGGCCAATTAGATAGGAGTGGATAATAGTGAGCGGTAAGAGAGAAAAATTGACATAAGGGAGGTGCGTGAGGCAGTGGGGTGTTGTGCGGGCGACAAGGCTCGAGGTCTAGATGGTTTAACTTTTGTTTTCTTTCAGCATTGTTATACAGTCAGACATGATGAATTAAGTACTATTGACGAGTTTTAGGAGGGGTAGTTTCGGAAGGAGCTTAAATGCTTCTTTGATTGTAATTTTTACAAAGGAGGAAGAGACTTCTAGAATTGGGGACTACAAACCAATTGGTCTAGTTGGAAGCATCTACAAGATCATTTCTAAGGTGCTTTCTGATAGACTTAAAGAGAGTTTTTGCACGAGACTGTTTCGTTTTTGCAAAATGCTTTTGTTGATGGAAGGCAGATTTTGAATGCAGCTTTGGTGGATAATTAAGTGGTAGATTCGAGGGAGAAACAAGGTGAGTCGGGTGTTTTGTGCAAGTTAAATTTTGCTGAGTTCAATCAAGATCTAACTGTGCTAGTGGATTTTGACCTGTTGAAGTGCTCTTGCTTATATGTGGCAAGGTGCTTAACTAAATCTTATCCCAGTGAGATTTTTGTAATTGGAGATTCTCTTGAGTTAGTTATTTCATGAATCCTCCACTAATGTTTGGCGGATGTCTATTTTCGTCTAATGCTGAAGTTGTAGTATCCAGGAAATACTTGTCTCGTGTAAATGTGAGCTTCATTAAATTTTACTGAAATAAGACTTTACCTTCTAAGCTTGACATGAACCCTCTATTTGTTCTAATGCTGAATTGAGGATAAGATACACGGTAGAAGACCCGCCTTGCCACACCCTTAACCTCTAACCCTGTGCTTTTCTTGTAAAATTTATTTATTTATGTATAGAAGTTCAATTCCGTGCCTGTTTTCTATCCTTAACAAGTATCTTCATTCCAGGGTGTGGTGTTAATAATTCATAGTGTACACTTTTTTTTTTTTCCTTTTGGCTGCTGAAACTTGTCTTTATATGACAGAAAAGAAGATTGACGAGACTCCGAAGAAAAGTGTGTGCGCGTGTACCATAATGTGAGATTGTAAGTGATTCAAGTTTAATCCTGTGGTATTCTTGGGGGATAAACTGCTGCTGTGAAGTTCAGGGAAAACAGTATGATAGCTCATTGTTACTTGTTTGTTCGTTGAACGGCTATTCAATGTAACAGCGTGTCTATTTGTTTGAATGAATTTGGTAGGTGTACATTTTGTAATTGCAGATTTCTTATACAGAAATACAGAAAGTGTGCTGGATTGCATGC</genome_strand>
        <mrna_strand>GTTCCCCCATTTTAGCTGTGCGATTCAATGCAATCAAGCAGAAGAATCCTTGCTCTTTAATACACTG............................................................................................GTTTCGGAGGTGAAAAAACTGAGAAGAAAGAGGTTGGTGGGCGATCACAAATGCCGGAGGAAGATTTGACTGAAGTTAAGTTTCGTTTGTTCGATGGATCAGATGTGGGTCCATTTCAGTTCTCCCCGGCTTCAACCGTAGCTATGCTGAAAGAGAGAATTGTTGCTGAGTGGCCTAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGAAAATTGCACCTAAGGCGGCAAATGATGTCAAGTTGATAAGTGCTGGGAAAATTTTGGAGAACAACAAGACTGTTGGTCAATGTAAAACACCTTTCGGTGAACTACCTAATGGTGTGATTACCATGCATGCTGTTGTACAGCCATCAGTAGGTAAATCAAAATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAAGATTGACGAGACTCCGAAGAAAAGTGTGTGCGCGTGTACCATAATGTGAGATTGTAAGTGATTCAAGTTTAATCCTGTGGTATTCTTGGGGGATAAACTGCTGCTGTGAAGTTCAGGGAAAACAGTATGATAGCTCATTGTTACTTGTTTGTTCGTTGAACGGCTATTCAATGTAACAGCGTGTCTACTTGTTTGAATGAATTTGGTAGGTGTACATTTTGTAATTGCAGATTTCTTATACAGAAATCAGNAAAGTGTGCTGGATTGCATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E295234" ref_strand="+" ref_description="SGN-E295234 [cLET-20-E14]">
      <seq>cccattttagctgtgctattcaatgcaatcaagcagaagaatccttgctctttaatacactggtttcggaggtgaaaaaactgagaagaaagaggttggtgggcgatcacaaatgccggaggaagatttgactgaagttaagtttcgtttgttcgatggatcagatgtgggtccatttcagttctccccggcttcaaccgtagctatgctgaaagagagaattgttgctgagtggcctaaagataagaaaattgcacctaaggcggcaaatgatgtcaagttgataagtgctgggaaaattttggagaacaacaagactgttggtcaatgtaaaacacctttcggtgaactacctaatggtgtgattaccatgcatgctgttgtacagccatcagtaggtaaatcaaaatcagaaaagaagattgacgagactccgaagaaaagtgtgtgcgcgtgtaccataatgtgagattgtaagtgattcaagtttaatcctgtggtattcttgggggataaactgctgctgtgaagttcacggaaaacagtatgatagctcattggtacttgtttgttcgttgaacggctattcaatgtaacagcgtgtctatttgtttgaatgaatttggtaagtgtacatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="81480" stop="72803"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81180" g_stop="81119" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81118" i_stop="81027" i_length="92">
            <donor d_prob="0.973" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81026" g_stop="80847" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="242" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80846" i_stop="78868" i_length="1979">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78867" g_stop="78697" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="413" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78696" i_stop="73330" i_length="5367">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73329" g_stop="73103" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="640" r_length="227" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E295234" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E295234" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81180" e_stop="81119"/>
          <exon e_start="81026" e_stop="80847"/>
          <exon e_start="78867" e_stop="78697"/>
          <exon e_start="73329" e_stop="73103"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCATTTTAGCTGTGCGATTCAATGCAATCAAGCAGAAGAATCCTTGCTCTTTAATACACTGGTAAACTTGTTTATTCACGTTGCTTATATATATATATTTGCTTCTCATCTCGCTTTTTTCTGACTGTTAAGCTGTTTGTCTCTGCGATTTAGGTTTCGGAGGTGAAAAAACTGAGAAGAAAGAGGTTGGTGGGCGATCACAAATGCCGGAGGAAGATTTGACTGAAGTTAAGTTTCGTTTGTTCGATGGATCAGATGTGGGTCCATTTCAGTTCTCCCCGGCTTCAACCGTAGCTATGCTGAAAGAGAGAATTGTTGCTGAGTGGCCTAAAGGTTAGTAAAATTACGTCATTTTTGTTAGTTTTTGGAGGCTTGCGTTGCATAATTGAGATGTTTTTGGTTGAGTTCTGTTAATTGTTTATGGAAATGGGGAAACAGGGTTTGATGAGAATACCCATAAATTTAATGACACTTAGCACCCTAAGAAACAGTATTCAGTACCTCATCAGCCTCCAACCCAAATAAATGTTTGAAAGAAATGTTTTTTGTTTGCATTTTTGGGGCTTTTAGTTGGGGTTTTGGTGATCAAGGGATGGATCTTTTAATCTGAGATTTTGATTGATAAGGCTAAAATGAAAATGGACTAAAGTTCACATCAAATAGCTAAAGAGATTTTTGTCATGTTAACTTTCGATACCAAACACACTTGTATGCAAAATGATGAGCAGAATACCTAGCTAGGCCAAATCCCTGTGGCACTCCTATCCAACACGGTAATCCTTAATACACTGAACCTTTTGAAAGAGTCTAACAAGCAACACCACTTTCGCAACGTGCACAAAATAGGTGTGTTGTGCCTGTGTGAATTTTGTCCCAGCCCATATTTGATATTCCTATCCCCATAGAACCCCTCCTCCCCTTTCTCCCACACAGGAGATACAAAATTTCAGATACGAAAATTGAGTGCTTGTTGTTCAAATCTTGTGGAATCGGTTATATTGTGAGACTTACAAGCTTTAAGACTGATTTTTGTGAAGGTTGGGTGGAAAAATTAAGGAATCTACCATTGTTGGGCATTTTTTTAGATGAAGTAATAGATTTCACCTTCCATTGTTGGGCATTGAGAAAACTTGAAAATACAACTGGGTCTTGTTGACTTTTGAGTTGTGCTCAATTCATTTGGGGTTTAATTAAATAGTTTTTTATGGAAACTTTCTCATGGACAACCATGGTGGTGGCAGCCATGATCAATTAAATGTTAATGACATGTGTCACGACCATATTAGGGCCTGACATACACATCGTTTTGATAACTGGCCAAGCACAGAAGTGGTGTGTAAAAGATACTTTGAAAAGATTGGCTGTGTAAAAGGTTATTCGTATTGGCCAAAGGTCTCTGATTGTTCTCCATACCTCAACCCCATAGTTAGCTAACATCTTTAACTGCTTCTACATCTAATTCAGAAATCTAAAATGATTTTTGAATTAACACTAAGTGATGCAGTAGAACAGATGATATCTGGGTCTGAATCCTGAGAATGGAGAAATCTCTTTTAGGGAATGCCTAATCTCAATGAACTTTTGTGGCGTGAATTTGGATTAATTGGACAAGTGGATTCTAAGTACCTCATGTTTAACAAAAAAATTATTTTTGTGTTTGATTGACATGATTTTTACTTTATATATTTCGTTTAATTTTACGTTGTTTAGTTTGTTTGTCCAGTTAATCATTTTCTTTGTTTAATAGTTATTTTTTCTTACATTAGGTAGTTGTATTGTGCATGCGCACACACGTATAGAGATAGGTGGGACTTGTGAGGTTGTGAGCAACAAGTTTCAAAGAACTTATAATTTGCCTTGTTAGACAAATTATATAGTGTTGTAATTAATTGGTCTAATATGGAGATTGATAAAGAGGATTTTAGCCAATTTCAATTAACTTAGAGTTTGAAGCACAACTTTTTGATAATTTAACTTTTGTTAAAGAGCTTTAGTTCAGTATTTTTAAGTCAACCAAATTGTACCAAAATCCAAGCCCAATTCATACTGGACGAATGAACATAATCAAATCAGTATAAGAATTTTGTTTGAGGAGTATTGGTTATGAGCTGCAATTGGCTATCCCTATTTTTCTTTATGCCATCCAGAAAAGTCTATTGATATCTAAATCCTTTAAAGCCTTTAATGTTTGACAGATCTTCATTTTATTAACTTACTATAAACTATATATTCAGGAAATTGGGAAAGGGTTATTATTTATTTCTATGTGGCCTCTAATTTCCTGAGATTAAGTTGTGATGCTCTCTTGGCAGATAAGAAAATTGCACCTAAGGCGGCAAATGATGTCAAGTTGATAAGTGCTGGGAAAATTTTGGAGAACAACAAGACTGTTGGTCAATGTAAAACACCTTTCGGTGAACTACCTAATGGTGTGATTACCATGCATGCTGTTGTACAGCCATCAGTAGGTAAATCAAAATCAGGTGGGTTCCTCTTACTTGATTTGTGGTAATAGACACTGGTTTTACCCTTTCTGTAATGTATTTATATTTTTTGAGGCTATTGGTGATTCTGTTACTGTGTGTTCAGGAAAAAATAAGGACAAGAATCTTCTTCATCTTCTTAATATCTTAATTGTCATGCAATATAGTTAACTGGTTGGTTGTATGTACCTTATTTTTAACATGGTAATGCTTTTAATGTCTATGCCTCTATGGTTCTTTACATTTTGCCTTACAAAGAAATTTATGTGGTATGTGTTAAAATTCCAGATGATTGCAAGGGCTCGTGCCCAGGGACCATTTTCAGATGTATGTTGTATTAATTGCAGTGGTTCATATGGTATACTGAATATTTTAGCTTATGTAACAGAAAGTATGAAGTTAGAATCGTGTTTCAACCCCGTCATATGCAAGATAGTATTAACTCTTCAAGTGATGGAGACTCAGTTTCTGTATTTTCATGTCTTAGCTTGCATGTCAGGTCTTCATTTTAGAAGAGATCAAAAGGGTTACTATAAATTCAAGTGTCTATCATAAACTGTAACAATAAAAAAGGAGTGCTGCAGGTTGCATTACCTTAAGTTCTAGTTGATAACCTAAACCTAGCTTATGTCTTAAAGTATAGGGTTTTATCTGATTCATAATCCACATATGAAGAGTTGCTCCAAACAAATTACTAAACATATTTAAGTTAAACGTAACTAGGTTGATCTACCACTGAATATCAACTATGATTACTTATCCTGACACCATCGTAATTAATATGAGCTTTCAATTAAGAACATACTTAATCAAATCTGATTTCACCTAATTTAGTGAGGATTGCATTTAAAAAATGTTACTCTGTCTATATTAGTGTCGAAGTGCGGAATTTAAGAAAACAACCTTTGAATCTTGTAATCATAAACTAAGGATATTCGTAATGTGCCAAATTGCCCATTGAATCCCGTGGTTTTAGACAAGCGAAGTAGAGTTTTGGAATTAGAGAGTCACCTACTTTAAAAAGAGACTTTCTTTTTGAAATAGACTAAAAAGGGAAGTAAGGTACTTGAGTTGAAACGGGGGAAGTATTCTTTTATATATACCATGTTGCATCTTGTAGATACACCACAAATGAAAATTATTGTGATTATGCCGATGGTCAAGAAAGTTAACTTGTGATGATGTGTATAGAACAATAAGAACAACAAAATTAGAGTTGATATTCCCCAAAAAGATGAAGAATTATATTGTGTTTAGTATATAATATATGGATTCATCTACTATATATAGTATATATGGGCCAGGAGACGTGTCGTATACAACATTACACACTATGTAGGTGATTAGGTCATCTGTGCAAAGCATGCCCTGATTTGGTTATAATAGTTGGGATCACATTCCTTCCATATTAGTTTCATATTCATGAGCCTTCAAGAATAGAAATATTTTTATGTAGATTGAGATGAGTAGTTTTTTTTGCTATTGGGTTTAGTCAATGATTTGCTTAGTATAAGCTCATTTCTTTGGAGACCCAGTGTTTTTAGAAACAAAAAGTGCAAAAACGAGGTCTATTGGCTTGAGGCAAAAAGTGATAAGTGAAGGGCACACTTCTTTGGAATGAAGTGCATAATTTGAGAAATTTAGATAATAATCTATGACCCAGATGTTGCAAAAAGCTTGCAACTCATAGGTTGTTCGTGAACAATATTACCTCAAAAGCTCCAAATGACATGTTAAGGACTTAACATTTTACAACATTACCAGTTTTAAAAAAAGGTCTTCCATCGTAGGTATTCAAGATCCACTTTTCCCAAATTATGTATCAGTTTTTATTTTGGCACTCCCATAAATGTTTGTCATCCTCAAGATAAAAGTTAGTTGTATACCTTTGTTTTTATTCATGGTGTTAGTTGGAACATGTAAATGATGCTGAATCAGTTCTGCAGATGTTAGAAACCTTCGACCTTCAGGGTTAGATGGGATATATTCTCATTTGATTTTAACAGTGTACATATGTACATCACGTCCTCTGTGCTAAGTTTATTTCTAAAAGTTACTTCACTTTCTCCCAAACAAAAAACTCTCTTAAACGTTGGTTACACTTTTATAAACAATAATATTCGACATGCTTAATTTATAAAAACACACTACTTCTAAACACTCCTCATGTTGGTGATGTATCGTAGACTCATTAATTATCTTAAATACAATCATTAGACATTCTAATTATCAAACTCACTTTTGAATCATGATTTTGATGTTTTTCCTCTTAAATACATAGGTTAAATGAATTTGTTAAATTCTAAGCCTAGTCTTGACATGAAATGGGGCATACAATGGGATAGGGTGAGTGAGTACTAATGTGTTAATTCATGTCTGGCGATGTTAACTATTCTATTTTGGGACAAGCAACTGTTCCAGTCTAGTATCAATGTTTTATCCAATTTTTATGAAGATGTTTCGCCTGGGAAATCTCTGAATATTCTTTTCTTGCTTTAGTTCCAAGTTGTTGGCTGGTTTATAACAATTCCAAGTTTAGAATGTCTTGTCAGAATTACCTTTTGTGGGTTGAGCTTTGTAAATTTAGGTTTAACAAATCGGGAAAATATTATTAATTTTTTAATCTTCTTATTTAGTGATCGATACTCATATTGAAATTTAACTAATCTGAGTGTCTAATTTGGAAAAAGGGGCTAGAGGTGGAACATTTGATTTTTCAACTGCTAGGATTAAACCTTTTGGATTCTTGAATAGAGTCAATTGTTGTTGGAGAGATTTGAAGTTACAGTATTCTTATGTGAATAGATTCTAAGAGCTTTTTGTGTACTACTTTATCCTCTATTCTTTTGTGACAGCATCCCTATTATTTTATAAGAGCTGGTGTGAACTCAAGTTTATAAGATATTTCAACCAATATGTATTACATTAGTAGGAGCTGTCACCCTCCAACATCCGTCGCTTCTACTTACATATCTGATTCTGGAAGGCATGTATCTGGAAAATGTTTTTCCTTTTCCTCTTTATTGTACTTTGTACTAATTTACGTAATAGTAAACAAAAGTATTTTCTTCAAATGAATTTGAGACTGGGAGTGTTAATGTGAAGTTGCCCACATGAATTGTTAAAGATGAGAATACATCAATGAACTTGAAATTTACAAAATAAATGAAATGTTCTTTTGGTATATAAAGGATTTTATTACCAAAAGAGAATCTGTACAACACCTTGACATGATAATTTAGAATTGGACAACAAGTTCCAACTTCTAGAGTGACCTAATGCTCCTACTTTATTTTAATATTATCAAAATAGGAGCAGATGTGATATTTATTCAAGAAACAAAAATGGAAACTTTGACGAATAGAACTATTAGAAGTGTGTGTGTGTGTTGGGGCGGGGAGGGAGTAAGATTACTTTCTGGCACAGGACAGTGCAGGACAAATACTTATTCTTTGGGATGATAGGAAGGCGAGAGAACAGAAAGGAGGAGTATGTTGAGCTTAATAAGGGGGAGTTCATGTTAAGGGTGCAGTTTAGTTTTAAAATAGGGTGGAATGCAGTTTTCTTTGGAGAAGTTAGGGAATTGTATGGAAAAGAGGTGGGAGATCCCTTGGGTGTTAAAAAGGGATTTTTAACACTACAAGGGATCTTAGGAAGGGATTTTTAACACTATAAGATTCGCGGAGGAGAGGTTGGGTTACAGGCGATTTCCAGGGAAATGGAGGAATTCTTGCAGTTTTTAACCACCTTCTTATAGATTTACCTTTGATAGGTGCCAATTTCAACCAAGCATTATTCAATTCCCTCTCTTGTGGAGATCATTCACCTATTATGTTGGATGGTGTAGGGGTAGAAGGATGAGATCACTTTTCAAATTCGAGAACATGTGGCTGTGAGAGACAGACTTTGTAGATAGAGTAGCCGGGGCATAGAGGAGAGACCATCTTTCAGACTTGTAAAAAAGTAAAGATGCTTAAGAAAGACTTAAGATGTGGAATCAGAGGTAGTGTTTGGGAGGGTAGAGGTGAAAATGAGGGAGATTATGAATGAGGTGGGGGAATTAGAAAGAATACAGGTGGGAAGGAAGTTGGACAAAAGGGAAATGGAGAAAAAATAAATTTTAAAAATGGAATTAGCTTTAAGAGACTAGTTGGAGACAAAAATTGAGCTCGTTGGGGTCCGAGTATTGGTATTCTAACACAAGTTCTTTTGCAGGGTAATAGTTGCAAATAGGAGGAGAAATTTAATAGAGTGAGTAGAGTTGGGGGGAGATACATACATGTGGGAGAGGAAGAAGTAGGAAGAGCAGTTGTTCAATTCTATGAACAATTGTTCAAAGAGGAAGAAGAATGGAGGCCAATTAGATAGGAGTGGATAATAGTGAGCGGTAAGAGAGAAAAATTGACATAAGGGAGGTGCGTGAGGCAGTGGGGTGTTGTGCGGGCGACAAGGCTCGAGGTCTAGATGGTTTAACTTTTGTTTTCTTTCAGCATTGTTATACAGTCAGACATGATGAATTAAGTACTATTGACGAGTTTTAGGAGGGGTAGTTTCGGAAGGAGCTTAAATGCTTCTTTGATTGTAATTTTTACAAAGGAGGAAGAGACTTCTAGAATTGGGGACTACAAACCAATTGGTCTAGTTGGAAGCATCTACAAGATCATTTCTAAGGTGCTTTCTGATAGACTTAAAGAGAGTTTTTGCACGAGACTGTTTCGTTTTTGCAAAATGCTTTTGTTGATGGAAGGCAGATTTTGAATGCAGCTTTGGTGGATAATTAAGTGGTAGATTCGAGGGAGAAACAAGGTGAGTCGGGTGTTTTGTGCAAGTTAAATTTTGCTGAGTTCAATCAAGATCTAACTGTGCTAGTGGATTTTGACCTGTTGAAGTGCTCTTGCTTATATGTGGCAAGGTGCTTAACTAAATCTTATCCCAGTGAGATTTTTGTAATTGGAGATTCTCTTGAGTTAGTTATTTCATGAATCCTCCACTAATGTTTGGCGGATGTCTATTTTCGTCTAATGCTGAAGTTGTAGTATCCAGGAAATACTTGTCTCGTGTAAATGTGAGCTTCATTAAATTTTACTGAAATAAGACTTTACCTTCTAAGCTTGACATGAACCCTCTATTTGTTCTAATGCTGAATTGAGGATAAGATACACGGTAGAAGACCCGCCTTGCCACACCCTTAACCTCTAACCCTGTGCTTTTCTTGTAAAATTTATTTATTTATGTATAGAAGTTCAATTCCGTGCCTGTTTTCTATCCTTAACAAGTATCTTCATTCCAGGGTGTGGTGTTAATAATTCATAGTGTACACTTTTTTTTTTTTCCTTTTGGCTGCTGAAACTTGTCTTTATATGACAGAAAAGAAGATTGACGAGACTCCGAAGAAAAGTGTGTGCGCGTGTACCATAATGTGAGATTGTAAGTGATTCAAGTTTAATCCTGTGGTATTCTTGGGGGATAAACTGCTGCTGTGAAGTTCAGGGAAAACAGTATGATAGCTCATTGTTACTTGTTTGTTCGTTGAACGGCTATTCAATGTAACAGCGTGTCTATTTGTTTGAATGAATTTGGTAGGTGTACATTTT</genome_strand>
        <mrna_strand>CCCATTTTAGCTGTGCTATTCAATGCAATCAAGCAGAAGAATCCTTGCTCTTTAATACACTG............................................................................................GTTTCGGAGGTGAAAAAACTGAGAAGAAAGAGGTTGGTGGGCGATCACAAATGCCGGAGGAAGATTTGACTGAAGTTAAGTTTCGTTTGTTCGATGGATCAGATGTGGGTCCATTTCAGTTCTCCCCGGCTTCAACCGTAGCTATGCTGAAAGAGAGAATTGTTGCTGAGTGGCCTAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGAAAATTGCACCTAAGGCGGCAAATGATGTCAAGTTGATAAGTGCTGGGAAAATTTTGGAGAACAACAAGACTGTTGGTCAATGTAAAACACCTTTCGGTGAACTACCTAATGGTGTGATTACCATGCATGCTGTTGTACAGCCATCAGTAGGTAAATCAAAATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAAGATTGACGAGACTCCGAAGAAAAGTGTGTGCGCGTGTACCATAATGTGAGATTGTAAGTGATTCAAGTTTAATCCTGTGGTATTCTTGGGGGATAAACTGCTGCTGTGAAGTTCACGGAAAACAGTATGATAGCTCATTGGTACTTGTTTGTTCGTTGAACGGCTATTCAATGTAACAGCGTGTCTATTTGTTTGAATGAATTTGGTAAGTGTACATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E217120" ref_strand="-" ref_description="SGN-E217120 [cLEL-1-G8](-)">
      <seq>ggcactttgtttgggtccatttcagttctccccggcttcaaccgtagctatgctgaaagagagaattgttgctgagtggcctaaagataagaaaattgcacctaaggcggcaaatgatgtcaagttgataagtgctgggaaaattttggagaacaacaagactgttggtcaatgtaaaacacctttcggtgaactacctaatggtgtgattaccatgcatgctgttgtacagccatcagtaggtaaatcaaaatcagaaaagaagattgacgagactccgaagaaaagtgtgtgcgcgtgtaccataatgtgagattgtaagtgattcaagtttaatcctgtggtattcttgggggaaaaactgctgttgtgaagttcagggaaaacagtatgatagctcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="81231" stop="72884"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80932" g_stop="80847" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="0.907"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80846" i_stop="78868" i_length="1979">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="78867" g_stop="78697" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="257" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="78696" i_stop="73330" i_length="5367">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73329" g_stop="73184" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="403" r_length="146" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E217120" ref_strand="-">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>403</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E217120" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="80932" e_stop="80847"/>
          <exon e_start="78867" e_stop="78697"/>
          <exon e_start="73329" e_stop="73184"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGATCAGATGTGGGTCCATTTCAGTTCTCCCCGGCTTCAACCGTAGCTATGCTGAAAGAGAGAATTGTTGCTGAGTGGCCTAAAGGTTAGTAAAATTACGTCATTTTTGTTAGTTTTTGGAGGCTTGCGTTGCATAATTGAGATGTTTTTGGTTGAGTTCTGTTAATTGTTTATGGAAATGGGGAAACAGGGTTTGATGAGAATACCCATAAATTTAATGACACTTAGCACCCTAAGAAACAGTATTCAGTACCTCATCAGCCTCCAACCCAAATAAATGTTTGAAAGAAATGTTTTTTGTTTGCATTTTTGGGGCTTTTAGTTGGGGTTTTGGTGATCAAGGGATGGATCTTTTAATCTGAGATTTTGATTGATAAGGCTAAAATGAAAATGGACTAAAGTTCACATCAAATAGCTAAAGAGATTTTTGTCATGTTAACTTTCGATACCAAACACACTTGTATGCAAAATGATGAGCAGAATACCTAGCTAGGCCAAATCCCTGTGGCACTCCTATCCAACACGGTAATCCTTAATACACTGAACCTTTTGAAAGAGTCTAACAAGCAACACCACTTTCGCAACGTGCACAAAATAGGTGTGTTGTGCCTGTGTGAATTTTGTCCCAGCCCATATTTGATATTCCTATCCCCATAGAACCCCTCCTCCCCTTTCTCCCACACAGGAGATACAAAATTTCAGATACGAAAATTGAGTGCTTGTTGTTCAAATCTTGTGGAATCGGTTATATTGTGAGACTTACAAGCTTTAAGACTGATTTTTGTGAAGGTTGGGTGGAAAAATTAAGGAATCTACCATTGTTGGGCATTTTTTTAGATGAAGTAATAGATTTCACCTTCCATTGTTGGGCATTGAGAAAACTTGAAAATACAACTGGGTCTTGTTGACTTTTGAGTTGTGCTCAATTCATTTGGGGTTTAATTAAATAGTTTTTTATGGAAACTTTCTCATGGACAACCATGGTGGTGGCAGCCATGATCAATTAAATGTTAATGACATGTGTCACGACCATATTAGGGCCTGACATACACATCGTTTTGATAACTGGCCAAGCACAGAAGTGGTGTGTAAAAGATACTTTGAAAAGATTGGCTGTGTAAAAGGTTATTCGTATTGGCCAAAGGTCTCTGATTGTTCTCCATACCTCAACCCCATAGTTAGCTAACATCTTTAACTGCTTCTACATCTAATTCAGAAATCTAAAATGATTTTTGAATTAACACTAAGTGATGCAGTAGAACAGATGATATCTGGGTCTGAATCCTGAGAATGGAGAAATCTCTTTTAGGGAATGCCTAATCTCAATGAACTTTTGTGGCGTGAATTTGGATTAATTGGACAAGTGGATTCTAAGTACCTCATGTTTAACAAAAAAATTATTTTTGTGTTTGATTGACATGATTTTTACTTTATATATTTCGTTTAATTTTACGTTGTTTAGTTTGTTTGTCCAGTTAATCATTTTCTTTGTTTAATAGTTATTTTTTCTTACATTAGGTAGTTGTATTGTGCATGCGCACACACGTATAGAGATAGGTGGGACTTGTGAGGTTGTGAGCAACAAGTTTCAAAGAACTTATAATTTGCCTTGTTAGACAAATTATATAGTGTTGTAATTAATTGGTCTAATATGGAGATTGATAAAGAGGATTTTAGCCAATTTCAATTAACTTAGAGTTTGAAGCACAACTTTTTGATAATTTAACTTTTGTTAAAGAGCTTTAGTTCAGTATTTTTAAGTCAACCAAATTGTACCAAAATCCAAGCCCAATTCATACTGGACGAATGAACATAATCAAATCAGTATAAGAATTTTGTTTGAGGAGTATTGGTTATGAGCTGCAATTGGCTATCCCTATTTTTCTTTATGCCATCCAGAAAAGTCTATTGATATCTAAATCCTTTAAAGCCTTTAATGTTTGACAGATCTTCATTTTATTAACTTACTATAAACTATATATTCAGGAAATTGGGAAAGGGTTATTATTTATTTCTATGTGGCCTCTAATTTCCTGAGATTAAGTTGTGATGCTCTCTTGGCAGATAAGAAAATTGCACCTAAGGCGGCAAATGATGTCAAGTTGATAAGTGCTGGGAAAATTTTGGAGAACAACAAGACTGTTGGTCAATGTAAAACACCTTTCGGTGAACTACCTAATGGTGTGATTACCATGCATGCTGTTGTACAGCCATCAGTAGGTAAATCAAAATCAGGTGGGTTCCTCTTACTTGATTTGTGGTAATAGACACTGGTTTTACCCTTTCTGTAATGTATTTATATTTTTTGAGGCTATTGGTGATTCTGTTACTGTGTGTTCAGGAAAAAATAAGGACAAGAATCTTCTTCATCTTCTTAATATCTTAATTGTCATGCAATATAGTTAACTGGTTGGTTGTATGTACCTTATTTTTAACATGGTAATGCTTTTAATGTCTATGCCTCTATGGTTCTTTACATTTTGCCTTACAAAGAAATTTATGTGGTATGTGTTAAAATTCCAGATGATTGCAAGGGCTCGTGCCCAGGGACCATTTTCAGATGTATGTTGTATTAATTGCAGTGGTTCATATGGTATACTGAATATTTTAGCTTATGTAACAGAAAGTATGAAGTTAGAATCGTGTTTCAACCCCGTCATATGCAAGATAGTATTAACTCTTCAAGTGATGGAGACTCAGTTTCTGTATTTTCATGTCTTAGCTTGCATGTCAGGTCTTCATTTTAGAAGAGATCAAAAGGGTTACTATAAATTCAAGTGTCTATCATAAACTGTAACAATAAAAAAGGAGTGCTGCAGGTTGCATTACCTTAAGTTCTAGTTGATAACCTAAACCTAGCTTATGTCTTAAAGTATAGGGTTTTATCTGATTCATAATCCACATATGAAGAGTTGCTCCAAACAAATTACTAAACATATTTAAGTTAAACGTAACTAGGTTGATCTACCACTGAATATCAACTATGATTACTTATCCTGACACCATCGTAATTAATATGAGCTTTCAATTAAGAACATACTTAATCAAATCTGATTTCACCTAATTTAGTGAGGATTGCATTTAAAAAATGTTACTCTGTCTATATTAGTGTCGAAGTGCGGAATTTAAGAAAACAACCTTTGAATCTTGTAATCATAAACTAAGGATATTCGTAATGTGCCAAATTGCCCATTGAATCCCGTGGTTTTAGACAAGCGAAGTAGAGTTTTGGAATTAGAGAGTCACCTACTTTAAAAAGAGACTTTCTTTTTGAAATAGACTAAAAAGGGAAGTAAGGTACTTGAGTTGAAACGGGGGAAGTATTCTTTTATATATACCATGTTGCATCTTGTAGATACACCACAAATGAAAATTATTGTGATTATGCCGATGGTCAAGAAAGTTAACTTGTGATGATGTGTATAGAACAATAAGAACAACAAAATTAGAGTTGATATTCCCCAAAAAGATGAAGAATTATATTGTGTTTAGTATATAATATATGGATTCATCTACTATATATAGTATATATGGGCCAGGAGACGTGTCGTATACAACATTACACACTATGTAGGTGATTAGGTCATCTGTGCAAAGCATGCCCTGATTTGGTTATAATAGTTGGGATCACATTCCTTCCATATTAGTTTCATATTCATGAGCCTTCAAGAATAGAAATATTTTTATGTAGATTGAGATGAGTAGTTTTTTTTGCTATTGGGTTTAGTCAATGATTTGCTTAGTATAAGCTCATTTCTTTGGAGACCCAGTGTTTTTAGAAACAAAAAGTGCAAAAACGAGGTCTATTGGCTTGAGGCAAAAAGTGATAAGTGAAGGGCACACTTCTTTGGAATGAAGTGCATAATTTGAGAAATTTAGATAATAATCTATGACCCAGATGTTGCAAAAAGCTTGCAACTCATAGGTTGTTCGTGAACAATATTACCTCAAAAGCTCCAAATGACATGTTAAGGACTTAACATTTTACAACATTACCAGTTTTAAAAAAAGGTCTTCCATCGTAGGTATTCAAGATCCACTTTTCCCAAATTATGTATCAGTTTTTATTTTGGCACTCCCATAAATGTTTGTCATCCTCAAGATAAAAGTTAGTTGTATACCTTTGTTTTTATTCATGGTGTTAGTTGGAACATGTAAATGATGCTGAATCAGTTCTGCAGATGTTAGAAACCTTCGACCTTCAGGGTTAGATGGGATATATTCTCATTTGATTTTAACAGTGTACATATGTACATCACGTCCTCTGTGCTAAGTTTATTTCTAAAAGTTACTTCACTTTCTCCCAAACAAAAAACTCTCTTAAACGTTGGTTACACTTTTATAAACAATAATATTCGACATGCTTAATTTATAAAAACACACTACTTCTAAACACTCCTCATGTTGGTGATGTATCGTAGACTCATTAATTATCTTAAATACAATCATTAGACATTCTAATTATCAAACTCACTTTTGAATCATGATTTTGATGTTTTTCCTCTTAAATACATAGGTTAAATGAATTTGTTAAATTCTAAGCCTAGTCTTGACATGAAATGGGGCATACAATGGGATAGGGTGAGTGAGTACTAATGTGTTAATTCATGTCTGGCGATGTTAACTATTCTATTTTGGGACAAGCAACTGTTCCAGTCTAGTATCAATGTTTTATCCAATTTTTATGAAGATGTTTCGCCTGGGAAATCTCTGAATATTCTTTTCTTGCTTTAGTTCCAAGTTGTTGGCTGGTTTATAACAATTCCAAGTTTAGAATGTCTTGTCAGAATTACCTTTTGTGGGTTGAGCTTTGTAAATTTAGGTTTAACAAATCGGGAAAATATTATTAATTTTTTAATCTTCTTATTTAGTGATCGATACTCATATTGAAATTTAACTAATCTGAGTGTCTAATTTGGAAAAAGGGGCTAGAGGTGGAACATTTGATTTTTCAACTGCTAGGATTAAACCTTTTGGATTCTTGAATAGAGTCAATTGTTGTTGGAGAGATTTGAAGTTACAGTATTCTTATGTGAATAGATTCTAAGAGCTTTTTGTGTACTACTTTATCCTCTATTCTTTTGTGACAGCATCCCTATTATTTTATAAGAGCTGGTGTGAACTCAAGTTTATAAGATATTTCAACCAATATGTATTACATTAGTAGGAGCTGTCACCCTCCAACATCCGTCGCTTCTACTTACATATCTGATTCTGGAAGGCATGTATCTGGAAAATGTTTTTCCTTTTCCTCTTTATTGTACTTTGTACTAATTTACGTAATAGTAAACAAAAGTATTTTCTTCAAATGAATTTGAGACTGGGAGTGTTAATGTGAAGTTGCCCACATGAATTGTTAAAGATGAGAATACATCAATGAACTTGAAATTTACAAAATAAATGAAATGTTCTTTTGGTATATAAAGGATTTTATTACCAAAAGAGAATCTGTACAACACCTTGACATGATAATTTAGAATTGGACAACAAGTTCCAACTTCTAGAGTGACCTAATGCTCCTACTTTATTTTAATATTATCAAAATAGGAGCAGATGTGATATTTATTCAAGAAACAAAAATGGAAACTTTGACGAATAGAACTATTAGAAGTGTGTGTGTGTGTTGGGGCGGGGAGGGAGTAAGATTACTTTCTGGCACAGGACAGTGCAGGACAAATACTTATTCTTTGGGATGATAGGAAGGCGAGAGAACAGAAAGGAGGAGTATGTTGAGCTTAATAAGGGGGAGTTCATGTTAAGGGTGCAGTTTAGTTTTAAAATAGGGTGGAATGCAGTTTTCTTTGGAGAAGTTAGGGAATTGTATGGAAAAGAGGTGGGAGATCCCTTGGGTGTTAAAAAGGGATTTTTAACACTACAAGGGATCTTAGGAAGGGATTTTTAACACTATAAGATTCGCGGAGGAGAGGTTGGGTTACAGGCGATTTCCAGGGAAATGGAGGAATTCTTGCAGTTTTTAACCACCTTCTTATAGATTTACCTTTGATAGGTGCCAATTTCAACCAAGCATTATTCAATTCCCTCTCTTGTGGAGATCATTCACCTATTATGTTGGATGGTGTAGGGGTAGAAGGATGAGATCACTTTTCAAATTCGAGAACATGTGGCTGTGAGAGACAGACTTTGTAGATAGAGTAGCCGGGGCATAGAGGAGAGACCATCTTTCAGACTTGTAAAAAAGTAAAGATGCTTAAGAAAGACTTAAGATGTGGAATCAGAGGTAGTGTTTGGGAGGGTAGAGGTGAAAATGAGGGAGATTATGAATGAGGTGGGGGAATTAGAAAGAATACAGGTGGGAAGGAAGTTGGACAAAAGGGAAATGGAGAAAAAATAAATTTTAAAAATGGAATTAGCTTTAAGAGACTAGTTGGAGACAAAAATTGAGCTCGTTGGGGTCCGAGTATTGGTATTCTAACACAAGTTCTTTTGCAGGGTAATAGTTGCAAATAGGAGGAGAAATTTAATAGAGTGAGTAGAGTTGGGGGGAGATACATACATGTGGGAGAGGAAGAAGTAGGAAGAGCAGTTGTTCAATTCTATGAACAATTGTTCAAAGAGGAAGAAGAATGGAGGCCAATTAGATAGGAGTGGATAATAGTGAGCGGTAAGAGAGAAAAATTGACATAAGGGAGGTGCGTGAGGCAGTGGGGTGTTGTGCGGGCGACAAGGCTCGAGGTCTAGATGGTTTAACTTTTGTTTTCTTTCAGCATTGTTATACAGTCAGACATGATGAATTAAGTACTATTGACGAGTTTTAGGAGGGGTAGTTTCGGAAGGAGCTTAAATGCTTCTTTGATTGTAATTTTTACAAAGGAGGAAGAGACTTCTAGAATTGGGGACTACAAACCAATTGGTCTAGTTGGAAGCATCTACAAGATCATTTCTAAGGTGCTTTCTGATAGACTTAAAGAGAGTTTTTGCACGAGACTGTTTCGTTTTTGCAAAATGCTTTTGTTGATGGAAGGCAGATTTTGAATGCAGCTTTGGTGGATAATTAAGTGGTAGATTCGAGGGAGAAACAAGGTGAGTCGGGTGTTTTGTGCAAGTTAAATTTTGCTGAGTTCAATCAAGATCTAACTGTGCTAGTGGATTTTGACCTGTTGAAGTGCTCTTGCTTATATGTGGCAAGGTGCTTAACTAAATCTTATCCCAGTGAGATTTTTGTAATTGGAGATTCTCTTGAGTTAGTTATTTCATGAATCCTCCACTAATGTTTGGCGGATGTCTATTTTCGTCTAATGCTGAAGTTGTAGTATCCAGGAAATACTTGTCTCGTGTAAATGTGAGCTTCATTAAATTTTACTGAAATAAGACTTTACCTTCTAAGCTTGACATGAACCCTCTATTTGTTCTAATGCTGAATTGAGGATAAGATACACGGTAGAAGACCCGCCTTGCCACACCCTTAACCTCTAACCCTGTGCTTTTCTTGTAAAATTTATTTATTTATGTATAGAAGTTCAATTCCGTGCCTGTTTTCTATCCTTAACAAGTATCTTCATTCCAGGGTGTGGTGTTAATAATTCATAGTGTACACTTTTTTTTTTTTCCTTTTGGCTGCTGAAACTTGTCTTTATATGACAGAAAAGAAGATTGACGAGACTCCGAAGAAAAGTGTGTGCGCGTGTACCATAATGTGAGATTGTAAGTGATTCAAGTTTAATCCTGTGGTATTCTTGGGGGATAAACTGCTGCTGTGAAGTTCAGGGAAAACAGTATGATAGCTCATT</genome_strand>
        <mrna_strand>GGCACTTTGTTTGGGTCCATTTCAGTTCTCCCCGGCTTCAACCGTAGCTATGCTGAAAGAGAGAATTGTTGCTGAGTGGCCTAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGAAAATTGCACCTAAGGCGGCAAATGATGTCAAGTTGATAAGTGCTGGGAAAATTTTGGAGAACAACAAGACTGTTGGTCAATGTAAAACACCTTTCGGTGAACTACCTAATGGTGTGATTACCATGCATGCTGTTGTACAGCCATCAGTAGGTAAATCAAAATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAAGATTGACGAGACTCCGAAGAAAAGTGTGTGCGCGTGTACCATAATGTGAGATTGTAAGTGATTCAAGTTTAATCCTGTGGTATTCTTGGGGGAAAAACTGCTGTTGTGAAGTTCAGGGAAAACAGTATGATAGCTCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E301149" ref_strand="+" ref_description="SGN-E301149 [cLEW-22-K2]">
      <seq>ttttatctgtgcgattcaatgcaatcaagcagaagaatccttgctctttaatacactggtttcggaggtgaaaaaactgagaagaaagaggttggtgggcgatcacaaatgccggaggaagatttgactgaagttaagtttcgtttgttcgatggatcagatgtgggtccatttcagttctccccggcttcaaccgtagctatgctgaaagagagaattgttgctgagtggcctaaagataagaaaattgcacctaaggcggcaaatgatgtcaagttgataagtgctgggaaaattttggagaacaacaagactgttggtcaatgtaaaacacctttcggtgaactacctaatggtgtgattaccatgcatgctgttgtacagccatcagtaggtaaatcaaaatcaggtgggttcctctttacttgatttgcggtaatagacactggttgtaccctttctgtaatgtatttatattttttgaggctattggtgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="81476" stop="78310"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81176" g_stop="81119" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81118" i_stop="81027" i_length="92">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81026" g_stop="80847" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="238" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80846" i_stop="78868" i_length="1979">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78867" g_stop="78610" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="497" r_length="259" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E301149" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E301149" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81176" e_stop="81119"/>
          <exon e_start="81026" e_stop="80847"/>
          <exon e_start="78867" e_stop="78610"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTAGCTGTGCGATTCAATGCAATCAAGCAGAAGAATCCTTGCTCTTTAATACACTGGTAAACTTGTTTATTCACGTTGCTTATATATATATATTTGCTTCTCATCTCGCTTTTTTCTGACTGTTAAGCTGTTTGTCTCTGCGATTTAGGTTTCGGAGGTGAAAAAACTGAGAAGAAAGAGGTTGGTGGGCGATCACAAATGCCGGAGGAAGATTTGACTGAAGTTAAGTTTCGTTTGTTCGATGGATCAGATGTGGGTCCATTTCAGTTCTCCCCGGCTTCAACCGTAGCTATGCTGAAAGAGAGAATTGTTGCTGAGTGGCCTAAAGGTTAGTAAAATTACGTCATTTTTGTTAGTTTTTGGAGGCTTGCGTTGCATAATTGAGATGTTTTTGGTTGAGTTCTGTTAATTGTTTATGGAAATGGGGAAACAGGGTTTGATGAGAATACCCATAAATTTAATGACACTTAGCACCCTAAGAAACAGTATTCAGTACCTCATCAGCCTCCAACCCAAATAAATGTTTGAAAGAAATGTTTTTTGTTTGCATTTTTGGGGCTTTTAGTTGGGGTTTTGGTGATCAAGGGATGGATCTTTTAATCTGAGATTTTGATTGATAAGGCTAAAATGAAAATGGACTAAAGTTCACATCAAATAGCTAAAGAGATTTTTGTCATGTTAACTTTCGATACCAAACACACTTGTATGCAAAATGATGAGCAGAATACCTAGCTAGGCCAAATCCCTGTGGCACTCCTATCCAACACGGTAATCCTTAATACACTGAACCTTTTGAAAGAGTCTAACAAGCAACACCACTTTCGCAACGTGCACAAAATAGGTGTGTTGTGCCTGTGTGAATTTTGTCCCAGCCCATATTTGATATTCCTATCCCCATAGAACCCCTCCTCCCCTTTCTCCCACACAGGAGATACAAAATTTCAGATACGAAAATTGAGTGCTTGTTGTTCAAATCTTGTGGAATCGGTTATATTGTGAGACTTACAAGCTTTAAGACTGATTTTTGTGAAGGTTGGGTGGAAAAATTAAGGAATCTACCATTGTTGGGCATTTTTTTAGATGAAGTAATAGATTTCACCTTCCATTGTTGGGCATTGAGAAAACTTGAAAATACAACTGGGTCTTGTTGACTTTTGAGTTGTGCTCAATTCATTTGGGGTTTAATTAAATAGTTTTTTATGGAAACTTTCTCATGGACAACCATGGTGGTGGCAGCCATGATCAATTAAATGTTAATGACATGTGTCACGACCATATTAGGGCCTGACATACACATCGTTTTGATAACTGGCCAAGCACAGAAGTGGTGTGTAAAAGATACTTTGAAAAGATTGGCTGTGTAAAAGGTTATTCGTATTGGCCAAAGGTCTCTGATTGTTCTCCATACCTCAACCCCATAGTTAGCTAACATCTTTAACTGCTTCTACATCTAATTCAGAAATCTAAAATGATTTTTGAATTAACACTAAGTGATGCAGTAGAACAGATGATATCTGGGTCTGAATCCTGAGAATGGAGAAATCTCTTTTAGGGAATGCCTAATCTCAATGAACTTTTGTGGCGTGAATTTGGATTAATTGGACAAGTGGATTCTAAGTACCTCATGTTTAACAAAAAAATTATTTTTGTGTTTGATTGACATGATTTTTACTTTATATATTTCGTTTAATTTTACGTTGTTTAGTTTGTTTGTCCAGTTAATCATTTTCTTTGTTTAATAGTTATTTTTTCTTACATTAGGTAGTTGTATTGTGCATGCGCACACACGTATAGAGATAGGTGGGACTTGTGAGGTTGTGAGCAACAAGTTTCAAAGAACTTATAATTTGCCTTGTTAGACAAATTATATAGTGTTGTAATTAATTGGTCTAATATGGAGATTGATAAAGAGGATTTTAGCCAATTTCAATTAACTTAGAGTTTGAAGCACAACTTTTTGATAATTTAACTTTTGTTAAAGAGCTTTAGTTCAGTATTTTTAAGTCAACCAAATTGTACCAAAATCCAAGCCCAATTCATACTGGACGAATGAACATAATCAAATCAGTATAAGAATTTTGTTTGAGGAGTATTGGTTATGAGCTGCAATTGGCTATCCCTATTTTTCTTTATGCCATCCAGAAAAGTCTATTGATATCTAAATCCTTTAAAGCCTTTAATGTTTGACAGATCTTCATTTTATTAACTTACTATAAACTATATATTCAGGAAATTGGGAAAGGGTTATTATTTATTTCTATGTGGCCTCTAATTTCCTGAGATTAAGTTGTGATGCTCTCTTGGCAGATAAGAAAATTGCACCTAAGGCGGCAAATGATGTCAAGTTGATAAGTGCTGGGAAAATTTTGGAGAACAACAAGACTGTTGGTCAATGTAAAACACCTTTCGGTGAACTACCTAATGGTGTGATTACCATGCATGCTGTTGTACAGCCATCAGTAGGTAAATCAAAATCAGGTGGGTTCCTC-TTACTTGATTTGTGGTAATAGACACTGGTTTTACCCTTTCTGTAATGTATTTATATTTTTTGAGGCTATTGGTGAT</genome_strand>
        <mrna_strand>TTTTATCTGTGCGATTCAATGCAATCAAGCAGAAGAATCCTTGCTCTTTAATACACTG............................................................................................GTTTCGGAGGTGAAAAAACTGAGAAGAAAGAGGTTGGTGGGCGATCACAAATGCCGGAGGAAGATTTGACTGAAGTTAAGTTTCGTTTGTTCGATGGATCAGATGTGGGTCCATTTCAGTTCTCCCCGGCTTCAACCGTAGCTATGCTGAAAGAGAGAATTGTTGCTGAGTGGCCTAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGAAAATTGCACCTAAGGCGGCAAATGATGTCAAGTTGATAAGTGCTGGGAAAATTTTGGAGAACAACAAGACTGTTGGTCAATGTAAAACACCTTTCGGTGAACTACCTAATGGTGTGATTACCATGCATGCTGTTGTACAGCCATCAGTAGGTAAATCAAAATCAGGTGGGTTCCTCTTTACTTGATTTGCGGTAATAGACACTGGTTGTACCCTTTCTGTAATGTATTTATATTTTTTGAGGCTATTGGTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E356407" ref_strand="+" ref_description="SGN-E356407 [cTOS-20-B12]">
      <seq>taccttttcgacgacccatgcatgttgtagttggtaggccaattatgctggagaaaaatccagagccaaccgttgaagaggtttctgaagtgcatagtcgatttactgaagcaatgcaagaactatttgaaaggcacaaaaagagggttggttatgaagatctaccactgagagttgtttaatgtttatatgataactctgcattaatatgtatctaaatcttctggttgtattactgcttttattcattatcttttcttgtttcctccatcttcttatgtgcatctaactctagtcatggaggagaaaagcagtatgaatagaaaaaaataaatgattatgaaatttgcagtcactaatatgcttggatatgaagagaaagacagtttgtatcttacaaattaatttatctaccatattatatttattgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="85821" stop="84591"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85521" g_stop="85442" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="80" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85441" i_stop="85243" i_length="199">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.939" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85242" g_stop="84883" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="440" r_length="360" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E356407" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>440</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E356407" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85521" e_stop="85442"/>
          <exon e_start="85242" e_stop="84883"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACCTTTTCGACGACCCATGCATGTTGTAGTTGGTAGGCCAATTATGCTGGAGAAAAATCCAGAGCCAACCGTTGAAGAGGTATGCCAGTTCACCCTGTTAGTCTGTCTCTTTCTTTGCTATTAGCACTGAGAAAATATTGTGGTATAGTCGTAAGGGGCTTGATTTGGTGCTTCAACACCAATATTTTCGATGCAGAGCATATATTATGTTAAAACTCAAAGATCTCAACAAATATTATGTCTGGACCCATAATTCACCTTAGATTTTTCTGTTGAAGGTTTCTGAAGTGCATAGTCGATTTACTGAAGCAATGCAAGAACTATTTGAAAGGCACAAAAAGAGGGTTGGTTATGAAGATCTACCACTGAGAGTTGTTTAATGTTTATATGATAACTCTGCATTAATATGTATCTAAATCTTCTGGTTGTATTACTGCTTTTATTCATTATCTTTTCTTGTTTCCTCCATCTTCTTATGTGCATCTAACTCTAGTCATGGAGGAGAAAAGCAGTATGAATAGAAAAAAATAAATGATTATGAAATTTGCAGTCACTAATATGCTTGGATATGAAGAGAAAGACAGTTTGTATCTTACAAATTAATTTATCTACCATATTATATTTATTGAATTCACACA</genome_strand>
        <mrna_strand>TACCTTTTCGACGACCCATGCATGTTGTAGTTGGTAGGCCAATTATGCTGGAGAAAAATCCAGAGCCAACCGTTGAAGAG.......................................................................................................................................................................................................GTTTCTGAAGTGCATAGTCGATTTACTGAAGCAATGCAAGAACTATTTGAAAGGCACAAAAAGAGGGTTGGTTATGAAGATCTACCACTGAGAGTTGTTTAATGTTTATATGATAACTCTGCATTAATATGTATCTAAATCTTCTGGTTGTATTACTGCTTTTATTCATTATCTTTTCTTGTTTCCTCCATCTTCTTATGTGCATCTAACTCTAGTCATGGAGGAGAAAAGCAGTATGAATAGAAAAAAATAAATGATTATGAAATTTGCAGTCACTAATATGCTTGGATATGAAGAGAAAGACAGTTTGTATCTTACAAATTAATTTATCTACCATATTATATTTATTGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E252852" ref_strand="+" ref_description="SGN-E252852 [cLEG-16-K12]">
      <seq>ggtcttatggcttggctccgtccatttcaacttcttaatacttattgcttcctttatttttcttcctttctctaaaacagtcatagttataggaatattgcttatacttattctcattccgattgatgagaaaaataattttgggcgaagattagctaggtacatctgtaagcatgcttgtggctattttccggtccatttgtatgtagaggatatcaaagcatttgatcctaatgaggcttacgtttttgggtatgaaccacattctgtttggcctattggggcggttgcccttgctgatcttacaggtttcatgcctctcccaaaaatcaaagtgcttgcgagtactgctgtgttttatacacctttcttgcggcatatctggacatggttaggacttgcaccaataacaaggaaaaattttaaatccctcttggcatctggttacagctgcatcatagtgccaggtggagttcaagaaacattctatatggaacacggttcagagattgcttaccttcaaaaaagaaaaggatttgtacgaattgcaatagagacgggcaaaccactggttccagttttctgttttggtcagactgctatctataaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="89957" stop="86135"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89657" g_stop="89574" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89573" i_stop="89471" i_length="103">
            <donor d_prob="0.791" d_score="1.00"/>
            <acceptor a_prob="0.883" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89470" g_stop="89396" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="159" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89395" i_stop="89296" i_length="100">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89295" g_stop="89210" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="245" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89209" i_stop="87565" i_length="1645">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87564" g_stop="87458" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="352" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="87457" i_stop="87371" i_length="87">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.052" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="87370" g_stop="87215" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="508" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="87214" i_stop="86799" i_length="416">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.369" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="86798" g_stop="86712" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="509" r_stop="595" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="86711" i_stop="86450" i_length="262">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="86449" g_stop="86435" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="596" r_stop="610" r_length="15" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E252852" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E252852" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89657" e_stop="89574"/>
          <exon e_start="89470" e_stop="89396"/>
          <exon e_start="89295" e_stop="89210"/>
          <exon e_start="87564" e_stop="87458"/>
          <exon e_start="87370" e_stop="87215"/>
          <exon e_start="86798" e_stop="86712"/>
          <exon e_start="86449" e_stop="86435"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTCTTATGGCTTGGCTCCGTCCATTTCAACTTCTTAATACTTATTGCTTCCTTTATTTTTCTTCCTTTCTCTAAAACAGTCATGTTAGTTTTCTCTTTACTTTCTCTCTACCTCTTATTTCCATCTGCCTAGTAGTTTGGATTTGAGTTTGAGTTTGACTTTAGTCTTGATAAAATTTTGTTTCAGAGTTATAGGAATATTGCTTATACTTATTCTCATTCCGATTGATGAGAAAAATAATTTTGGGCGAAGATTAGCTAGGTAAGTGATTTTTTGTTGGTGCAATTTAGTATTTATCTGATTAAGTGGAAACTATTGATTTTCTGCTGTATTATTGATGCTGAAAATTGGGGTTCTTCAGGTACATCTGTAAGCATGCTTGTGGCTATTTTCCGGTCCATTTGTATGTAGAGGATATCAAAGCATTTGATCCTAATGAGGCTTACGGTAAATCAGTGATTATATTCATCCTTGATAAGAATAAATAAATCAACTTTCTTTAATTTGATTTGGGGGTTGGGGAATCAACTAATTCCTATTGTGAATTACTTTTTTCTCTTATGTATGAGAAGTTACTTGCACAGTGTTTCTGCTATAGTTGGTTTGTATATCTGCAGCTGTCTCGTCAGCGGAAGGATACCATTTTAAGAAATTATCAATTTGCGAAAAATTGTAATCCCACTTTTCTATTTTAGGCAGACTCCAATAAAATATCAGGGGCTGATTAAAGTTTATACTTTTGTGTGCGCTCATTAACTTGCAATTCACTTGATCACTTGGAAACATGGGGATTACCAAGCTATCTACACGCAGCATAATGTCGTACATTTCTTGGCATAATTGTGTGATTGCTGTCATGTAACTATGTTGCTTCCTCTGTTTCATTTTGTCTAGTTTTGAGTTGATATGGAGTTTAAAGAAGTATAGAAAACTTTCTATACTTGTAGTCTTAAACTGAAGATACGTAGAATATTCCAAAATGTTCTTTAATCTTAAACATGTTGCATGAAAAATTAGAATTTAAGTGTTACAGAAAGAAAGAGGAAAATATGCGTTCTTTTTTAAATGAGACTAAACATGAAAGTAAAATAAACAAACAGAAAACGGAGGGAATAAATTGAAGGTAATAACCAAGTCAACTGCAATCTCAATCAAAACAGTGATTAGTGGGCTTGCTTCAACATAAGTTAACCAATGCTATTGCTTTTAGATGACGAGTTATGTAAACCTTTGTCAGCTTGGGAGACTTGCTTTTGTCTAAACCATAGTTGACTTCTAACTAGCATAATTTGTCTAGAAAATTCTCCTTTGATGTGCTTCTCTTGATAAATTTCTCTTGCTATAGCAACCTCCATTGTTAGGAGCATAGCTTCTCAGTTTTTGTATCTACTTGCCGAGACCGGATGGAACATTATTTTGTTTCATTTTCTTATTAGCTCAAACACTCAGCTTTTCTCTGTGACTCTTTCTAAAGCTTTTCTATGTCATTTGACTCAGATTCCATTTTCTTGGGTGTCTTGTGAAGAATTAAATTAGAAAGGTTTAAAACTATATCACATGGTCTTGGCCCTCAAGTGTTGGCGTGTGAAATTTGCATTTCTAGAACATCGAATATAGGACCATAACAAGAAAATTTTTCCTTCGAAGTAAAATACTTTATAAGGATTTGAAAGTATGTTTGAAAGATAATAGAACAAATGCGTATACTTCAATAATTAAGGGGCCAAATGAAAAGAAATCCTCCTGTGCTCTTGCTTTCTTGGTCCTCTTCTCTTACTCTGTTGCTTTGTTGAGTATTCTATAGTTCGGGTAATTCAGTCCTTAAATCTTTATTTTCCTTGCTTGCTTATGTTCTAAAATTTCCTCTTTTGTTTTTTCTTGTTTCTTTTCTTTACTGTGAATAATAATATATTACTCCCATTATCCACTTCTTTTTCTTCGGGCACTTGCTCACATCCTTTCCATTGTAGGCAGATGATATCTGTTTCTACAAGGAACTAGATACATCATTCTGAGTGCTAGTCGCATTAATGGAAAATCAGAAATCTTCAGTTCCTGTTCTTCAGACTAACTCAGATGTTGTTACTTACAGTTTTTGGGTATGAACCACATTCTGTTTGGCCTATTGGGGCGGTTGCCCTTGCTGATCTTACAGGTTTCATGCCTCTCCCAAAAATCAAAGTGCTTGCGAGTACTGCTGTATGACTTGATTCCTTGTTCTTATATTTTAATTGTACATAAGTCTTATTTTCAGCTGTAGCATTTACTATGAAGAAACATTGACAGGTGTTTTATACACCTTTCTTGCGGCATATCTGGACATGGTTAGGACTTGCACCAATAACAAGGAAAAATTTTAAATCCCTCTTGGCATCTGGTTACAGCTGCATCATAGTGCCAGGTGGAGTTCAAGAAACATTCTATATGGAACACGGTTCAGAGGTTCAATCTCTAAACTTGATTGTATTTTCCAAACCAGTATATTATGCTGTACTCACCACATTTCTTCCTAACTCCTGGTAAGACCAAGTAGATGCACCCACAAAAAGGAGTTTTGATCAGGAATAACTAGTAGGAACTCATCAAAAGAGTATATAAGCTCTACTCTCTTTTCAACAAGTACTCTCTTCATTGGCTTGTAAACGACTTGATATTTAAGGAAAGAGATCTAGTTTTTCTTTCTTATGTGACCAGAAATTAAAGTATGTTTGGTGATGGCATGGTAAAAAAATTTCTATGAATCTTATGTTCCTTTTGGGTAAAACAATGTGCGAAATTGAGATTATTTCATATTCTTTAATGTGTGTGCTGGGCTAGAGAGGGGTTAAATCTTATTGCTCTCTTAACCTGTGATATAGATTGCTTACCTTCAAAAAAGAAAAGGATTTGTACGAATTGCAATAGAGACGGGCAAACCACTGGTTCCAGTTTTCTGTTTTGGTCAGGTGATATTTTGTTCTTCTATTTCCATTTTACGTAGTGTTCAAGTATTTACTTCCATCTTTGTGCTTCTATGCGTAAAGATGTCATTATTTGGGAATGAAATGTTCTCTATACTGTGCGAGTTTTGTATCCGTCTATATGATCAAAATTTCTAGCAGGACTGAATATTTTTCTTGCAAGCTATTAAAATATTTGGGTTGATATATAGTGTGTTATTGAAAAACTTTCCTGGTGTGTGCTTACGGTTTTACCTAAATTCTGCAGACTGCTATCTATAAA</genome_strand>
        <mrna_strand>GGTCTTATGGCTTGGCTCCGTCCATTTCAACTTCTTAATACTTATTGCTTCCTTTATTTTTCTTCCTTTCTCTAAAACAGTCAT.......................................................................................................AGTTATAGGAATATTGCTTATACTTATTCTCATTCCGATTGATGAGAAAAATAATTTTGGGCGAAGATTAGCTAG....................................................................................................GTACATCTGTAAGCATGCTTGTGGCTATTTTCCGGTCCATTTGTATGTAGAGGATATCAAAGCATTTGATCCTAATGAGGCTTACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGGGTATGAACCACATTCTGTTTGGCCTATTGGGGCGGTTGCCCTTGCTGATCTTACAGGTTTCATGCCTCTCCCAAAAATCAAAGTGCTTGCGAGTACTGCT.......................................................................................GTGTTTTATACACCTTTCTTGCGGCATATCTGGACATGGTTAGGACTTGCACCAATAACAAGGAAAAATTTTAAATCCCTCTTGGCATCTGGTTACAGCTGCATCATAGTGCCAGGTGGAGTTCAAGAAACATTCTATATGGAACACGGTTCAGAG................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTTACCTTCAAAAAAGAAAAGGATTTGTACGAATTGCAATAGAGACGGGCAAACCACTGGTTCCAGTTTTCTGTTTTGGTCAG......................................................................................................................................................................................................................................................................ACTGCTATCTATAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E252683" ref_strand="+" ref_description="SGN-E252683 [cLEG-16-M15]">
      <seq>ggtcttatggcttggctccgtccatttcaacttcttaatacttattgcttcctttatttttcttcctttctctaaaacagtcatagttataggaatattgcttatacttattctcattccgattgatgagaaaaataattttgggcgaagattagctaggtacatctgtaagcatgcttgtggctattttccggtccatttgtatgtagaggatatcaaagcatttgatcctaatgaggcttacgtttttgggtatgaaccacattctgtttggcctattggggcggttgcccttgctgatcttacaggtttcatgcctctcccaaaaatcaaagtgcttgcgagtactgctgtgttttatacacctttcttgcggcatatctggacatggttaggacttgcaccaataacaaggaaaaattttaaatccctcttggcatctggttacagctgcatcatagtgccaggtggagttcaagaaacattctatatggaacacggttcagagattgcttaccttcaaaaaagaaaaggatttgtacgaattgcaatagagacgggcaaaccactggttccagttttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="89957" stop="86423"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89657" g_stop="89574" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89573" i_stop="89471" i_length="103">
            <donor d_prob="0.791" d_score="1.00"/>
            <acceptor a_prob="0.883" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89470" g_stop="89396" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="159" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89395" i_stop="89296" i_length="100">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89295" g_stop="89210" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="245" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89209" i_stop="87565" i_length="1645">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87564" g_stop="87458" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="352" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="87457" i_stop="87371" i_length="87">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.052" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="87370" g_stop="87215" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="508" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="87214" i_stop="86799" i_length="416">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.369" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="86798" g_stop="86723" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="509" r_stop="584" r_length="76" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E252683" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>584</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E252683" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89657" e_stop="89574"/>
          <exon e_start="89470" e_stop="89396"/>
          <exon e_start="89295" e_stop="89210"/>
          <exon e_start="87564" e_stop="87458"/>
          <exon e_start="87370" e_stop="87215"/>
          <exon e_start="86798" e_stop="86723"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTCTTATGGCTTGGCTCCGTCCATTTCAACTTCTTAATACTTATTGCTTCCTTTATTTTTCTTCCTTTCTCTAAAACAGTCATGTTAGTTTTCTCTTTACTTTCTCTCTACCTCTTATTTCCATCTGCCTAGTAGTTTGGATTTGAGTTTGAGTTTGACTTTAGTCTTGATAAAATTTTGTTTCAGAGTTATAGGAATATTGCTTATACTTATTCTCATTCCGATTGATGAGAAAAATAATTTTGGGCGAAGATTAGCTAGGTAAGTGATTTTTTGTTGGTGCAATTTAGTATTTATCTGATTAAGTGGAAACTATTGATTTTCTGCTGTATTATTGATGCTGAAAATTGGGGTTCTTCAGGTACATCTGTAAGCATGCTTGTGGCTATTTTCCGGTCCATTTGTATGTAGAGGATATCAAAGCATTTGATCCTAATGAGGCTTACGGTAAATCAGTGATTATATTCATCCTTGATAAGAATAAATAAATCAACTTTCTTTAATTTGATTTGGGGGTTGGGGAATCAACTAATTCCTATTGTGAATTACTTTTTTCTCTTATGTATGAGAAGTTACTTGCACAGTGTTTCTGCTATAGTTGGTTTGTATATCTGCAGCTGTCTCGTCAGCGGAAGGATACCATTTTAAGAAATTATCAATTTGCGAAAAATTGTAATCCCACTTTTCTATTTTAGGCAGACTCCAATAAAATATCAGGGGCTGATTAAAGTTTATACTTTTGTGTGCGCTCATTAACTTGCAATTCACTTGATCACTTGGAAACATGGGGATTACCAAGCTATCTACACGCAGCATAATGTCGTACATTTCTTGGCATAATTGTGTGATTGCTGTCATGTAACTATGTTGCTTCCTCTGTTTCATTTTGTCTAGTTTTGAGTTGATATGGAGTTTAAAGAAGTATAGAAAACTTTCTATACTTGTAGTCTTAAACTGAAGATACGTAGAATATTCCAAAATGTTCTTTAATCTTAAACATGTTGCATGAAAAATTAGAATTTAAGTGTTACAGAAAGAAAGAGGAAAATATGCGTTCTTTTTTAAATGAGACTAAACATGAAAGTAAAATAAACAAACAGAAAACGGAGGGAATAAATTGAAGGTAATAACCAAGTCAACTGCAATCTCAATCAAAACAGTGATTAGTGGGCTTGCTTCAACATAAGTTAACCAATGCTATTGCTTTTAGATGACGAGTTATGTAAACCTTTGTCAGCTTGGGAGACTTGCTTTTGTCTAAACCATAGTTGACTTCTAACTAGCATAATTTGTCTAGAAAATTCTCCTTTGATGTGCTTCTCTTGATAAATTTCTCTTGCTATAGCAACCTCCATTGTTAGGAGCATAGCTTCTCAGTTTTTGTATCTACTTGCCGAGACCGGATGGAACATTATTTTGTTTCATTTTCTTATTAGCTCAAACACTCAGCTTTTCTCTGTGACTCTTTCTAAAGCTTTTCTATGTCATTTGACTCAGATTCCATTTTCTTGGGTGTCTTGTGAAGAATTAAATTAGAAAGGTTTAAAACTATATCACATGGTCTTGGCCCTCAAGTGTTGGCGTGTGAAATTTGCATTTCTAGAACATCGAATATAGGACCATAACAAGAAAATTTTTCCTTCGAAGTAAAATACTTTATAAGGATTTGAAAGTATGTTTGAAAGATAATAGAACAAATGCGTATACTTCAATAATTAAGGGGCCAAATGAAAAGAAATCCTCCTGTGCTCTTGCTTTCTTGGTCCTCTTCTCTTACTCTGTTGCTTTGTTGAGTATTCTATAGTTCGGGTAATTCAGTCCTTAAATCTTTATTTTCCTTGCTTGCTTATGTTCTAAAATTTCCTCTTTTGTTTTTTCTTGTTTCTTTTCTTTACTGTGAATAATAATATATTACTCCCATTATCCACTTCTTTTTCTTCGGGCACTTGCTCACATCCTTTCCATTGTAGGCAGATGATATCTGTTTCTACAAGGAACTAGATACATCATTCTGAGTGCTAGTCGCATTAATGGAAAATCAGAAATCTTCAGTTCCTGTTCTTCAGACTAACTCAGATGTTGTTACTTACAGTTTTTGGGTATGAACCACATTCTGTTTGGCCTATTGGGGCGGTTGCCCTTGCTGATCTTACAGGTTTCATGCCTCTCCCAAAAATCAAAGTGCTTGCGAGTACTGCTGTATGACTTGATTCCTTGTTCTTATATTTTAATTGTACATAAGTCTTATTTTCAGCTGTAGCATTTACTATGAAGAAACATTGACAGGTGTTTTATACACCTTTCTTGCGGCATATCTGGACATGGTTAGGACTTGCACCAATAACAAGGAAAAATTTTAAATCCCTCTTGGCATCTGGTTACAGCTGCATCATAGTGCCAGGTGGAGTTCAAGAAACATTCTATATGGAACACGGTTCAGAGGTTCAATCTCTAAACTTGATTGTATTTTCCAAACCAGTATATTATGCTGTACTCACCACATTTCTTCCTAACTCCTGGTAAGACCAAGTAGATGCACCCACAAAAAGGAGTTTTGATCAGGAATAACTAGTAGGAACTCATCAAAAGAGTATATAAGCTCTACTCTCTTTTCAACAAGTACTCTCTTCATTGGCTTGTAAACGACTTGATATTTAAGGAAAGAGATCTAGTTTTTCTTTCTTATGTGACCAGAAATTAAAGTATGTTTGGTGATGGCATGGTAAAAAAATTTCTATGAATCTTATGTTCCTTTTGGGTAAAACAATGTGCGAAATTGAGATTATTTCATATTCTTTAATGTGTGTGCTGGGCTAGAGAGGGGTTAAATCTTATTGCTCTCTTAACCTGTGATATAGATTGCTTACCTTCAAAAAAGAAAAGGATTTGTACGAATTGCAATAGAGACGGGCAAACCACTGGTTCCAGTTTTCT</genome_strand>
        <mrna_strand>GGTCTTATGGCTTGGCTCCGTCCATTTCAACTTCTTAATACTTATTGCTTCCTTTATTTTTCTTCCTTTCTCTAAAACAGTCAT.......................................................................................................AGTTATAGGAATATTGCTTATACTTATTCTCATTCCGATTGATGAGAAAAATAATTTTGGGCGAAGATTAGCTAG....................................................................................................GTACATCTGTAAGCATGCTTGTGGCTATTTTCCGGTCCATTTGTATGTAGAGGATATCAAAGCATTTGATCCTAATGAGGCTTACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGGGTATGAACCACATTCTGTTTGGCCTATTGGGGCGGTTGCCCTTGCTGATCTTACAGGTTTCATGCCTCTCCCAAAAATCAAAGTGCTTGCGAGTACTGCT.......................................................................................GTGTTTTATACACCTTTCTTGCGGCATATCTGGACATGGTTAGGACTTGCACCAATAACAAGGAAAAATTTTAAATCCCTCTTGGCATCTGGTTACAGCTGCATCATAGTGCCAGGTGGAGTTCAAGAAACATTCTATATGGAACACGGTTCAGAG................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTTACCTTCAAAAAAGAAAAGGATTTGTACGAATTGCAATAGAGACGGGCAAACCACTGGTTCCAGTTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E550897" ref_strand="+" ref_description="SGN-E550897 [TUS-54-E10]">
      <seq>tggtcttatggcttggctccgtccatttcaacttcttaatacttattgcttcctttatttttcttcctttctctaaaacagtcatagttataggaatattgcttatacttattctcattccgattgatgagaaaaataattttgggcgaagattagctaggtacatctgtaagcatgcttgtggctattttccggtccatttgtatgtagaggatatcaaagcatttgatcctaatgaggcttacgtttttgggtatgaaccacattctgtttggcctattggggcggttgcccttgctgatcttacaggtttcatgcctctcccaaaaatcaaagtgcttgcgagtactgctgtgttttatacacctttcttgcggcatatctggacatggttaggacttgcaccaataacaaggaaaaattttaaatccctcttggcatctggttacagctgcatcatagtgccaggtggagttcaagaaacattctatatggaacacggttcagagattgcttaccttcaaaaaagaaaggatttgtacgaattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="89958" stop="86459"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89658" g_stop="89574" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89573" i_stop="89471" i_length="103">
            <donor d_prob="0.791" d_score="1.00"/>
            <acceptor a_prob="0.883" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89470" g_stop="89396" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="160" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89395" i_stop="89296" i_length="100">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89295" g_stop="89210" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="246" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89209" i_stop="87565" i_length="1645">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87564" g_stop="87458" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="353" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="87457" i_stop="87371" i_length="87">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.052" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="87370" g_stop="87215" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="509" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="87214" i_stop="86799" i_length="416">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.369" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="86798" g_stop="86759" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="510" r_stop="548" r_length="39" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E550897" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E550897" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89658" e_stop="89574"/>
          <exon e_start="89470" e_stop="89396"/>
          <exon e_start="89295" e_stop="89210"/>
          <exon e_start="87564" e_stop="87458"/>
          <exon e_start="87370" e_stop="87215"/>
          <exon e_start="86798" e_stop="86759"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTCTTATGGCTTGGCTCCGTCCATTTCAACTTCTTAATACTTATTGCTTCCTTTATTTTTCTTCCTTTCTCTAAAACAGTCATGTTAGTTTTCTCTTTACTTTCTCTCTACCTCTTATTTCCATCTGCCTAGTAGTTTGGATTTGAGTTTGAGTTTGACTTTAGTCTTGATAAAATTTTGTTTCAGAGTTATAGGAATATTGCTTATACTTATTCTCATTCCGATTGATGAGAAAAATAATTTTGGGCGAAGATTAGCTAGGTAAGTGATTTTTTGTTGGTGCAATTTAGTATTTATCTGATTAAGTGGAAACTATTGATTTTCTGCTGTATTATTGATGCTGAAAATTGGGGTTCTTCAGGTACATCTGTAAGCATGCTTGTGGCTATTTTCCGGTCCATTTGTATGTAGAGGATATCAAAGCATTTGATCCTAATGAGGCTTACGGTAAATCAGTGATTATATTCATCCTTGATAAGAATAAATAAATCAACTTTCTTTAATTTGATTTGGGGGTTGGGGAATCAACTAATTCCTATTGTGAATTACTTTTTTCTCTTATGTATGAGAAGTTACTTGCACAGTGTTTCTGCTATAGTTGGTTTGTATATCTGCAGCTGTCTCGTCAGCGGAAGGATACCATTTTAAGAAATTATCAATTTGCGAAAAATTGTAATCCCACTTTTCTATTTTAGGCAGACTCCAATAAAATATCAGGGGCTGATTAAAGTTTATACTTTTGTGTGCGCTCATTAACTTGCAATTCACTTGATCACTTGGAAACATGGGGATTACCAAGCTATCTACACGCAGCATAATGTCGTACATTTCTTGGCATAATTGTGTGATTGCTGTCATGTAACTATGTTGCTTCCTCTGTTTCATTTTGTCTAGTTTTGAGTTGATATGGAGTTTAAAGAAGTATAGAAAACTTTCTATACTTGTAGTCTTAAACTGAAGATACGTAGAATATTCCAAAATGTTCTTTAATCTTAAACATGTTGCATGAAAAATTAGAATTTAAGTGTTACAGAAAGAAAGAGGAAAATATGCGTTCTTTTTTAAATGAGACTAAACATGAAAGTAAAATAAACAAACAGAAAACGGAGGGAATAAATTGAAGGTAATAACCAAGTCAACTGCAATCTCAATCAAAACAGTGATTAGTGGGCTTGCTTCAACATAAGTTAACCAATGCTATTGCTTTTAGATGACGAGTTATGTAAACCTTTGTCAGCTTGGGAGACTTGCTTTTGTCTAAACCATAGTTGACTTCTAACTAGCATAATTTGTCTAGAAAATTCTCCTTTGATGTGCTTCTCTTGATAAATTTCTCTTGCTATAGCAACCTCCATTGTTAGGAGCATAGCTTCTCAGTTTTTGTATCTACTTGCCGAGACCGGATGGAACATTATTTTGTTTCATTTTCTTATTAGCTCAAACACTCAGCTTTTCTCTGTGACTCTTTCTAAAGCTTTTCTATGTCATTTGACTCAGATTCCATTTTCTTGGGTGTCTTGTGAAGAATTAAATTAGAAAGGTTTAAAACTATATCACATGGTCTTGGCCCTCAAGTGTTGGCGTGTGAAATTTGCATTTCTAGAACATCGAATATAGGACCATAACAAGAAAATTTTTCCTTCGAAGTAAAATACTTTATAAGGATTTGAAAGTATGTTTGAAAGATAATAGAACAAATGCGTATACTTCAATAATTAAGGGGCCAAATGAAAAGAAATCCTCCTGTGCTCTTGCTTTCTTGGTCCTCTTCTCTTACTCTGTTGCTTTGTTGAGTATTCTATAGTTCGGGTAATTCAGTCCTTAAATCTTTATTTTCCTTGCTTGCTTATGTTCTAAAATTTCCTCTTTTGTTTTTTCTTGTTTCTTTTCTTTACTGTGAATAATAATATATTACTCCCATTATCCACTTCTTTTTCTTCGGGCACTTGCTCACATCCTTTCCATTGTAGGCAGATGATATCTGTTTCTACAAGGAACTAGATACATCATTCTGAGTGCTAGTCGCATTAATGGAAAATCAGAAATCTTCAGTTCCTGTTCTTCAGACTAACTCAGATGTTGTTACTTACAGTTTTTGGGTATGAACCACATTCTGTTTGGCCTATTGGGGCGGTTGCCCTTGCTGATCTTACAGGTTTCATGCCTCTCCCAAAAATCAAAGTGCTTGCGAGTACTGCTGTATGACTTGATTCCTTGTTCTTATATTTTAATTGTACATAAGTCTTATTTTCAGCTGTAGCATTTACTATGAAGAAACATTGACAGGTGTTTTATACACCTTTCTTGCGGCATATCTGGACATGGTTAGGACTTGCACCAATAACAAGGAAAAATTTTAAATCCCTCTTGGCATCTGGTTACAGCTGCATCATAGTGCCAGGTGGAGTTCAAGAAACATTCTATATGGAACACGGTTCAGAGGTTCAATCTCTAAACTTGATTGTATTTTCCAAACCAGTATATTATGCTGTACTCACCACATTTCTTCCTAACTCCTGGTAAGACCAAGTAGATGCACCCACAAAAAGGAGTTTTGATCAGGAATAACTAGTAGGAACTCATCAAAAGAGTATATAAGCTCTACTCTCTTTTCAACAAGTACTCTCTTCATTGGCTTGTAAACGACTTGATATTTAAGGAAAGAGATCTAGTTTTTCTTTCTTATGTGACCAGAAATTAAAGTATGTTTGGTGATGGCATGGTAAAAAAATTTCTATGAATCTTATGTTCCTTTTGGGTAAAACAATGTGCGAAATTGAGATTATTTCATATTCTTTAATGTGTGTGCTGGGCTAGAGAGGGGTTAAATCTTATTGCTCTCTTAACCTGTGATATAGATTGCTTACCTTCAAAAAAGAAAAGGATTTGTACGAATTG</genome_strand>
        <mrna_strand>TGGTCTTATGGCTTGGCTCCGTCCATTTCAACTTCTTAATACTTATTGCTTCCTTTATTTTTCTTCCTTTCTCTAAAACAGTCAT.......................................................................................................AGTTATAGGAATATTGCTTATACTTATTCTCATTCCGATTGATGAGAAAAATAATTTTGGGCGAAGATTAGCTAG....................................................................................................GTACATCTGTAAGCATGCTTGTGGCTATTTTCCGGTCCATTTGTATGTAGAGGATATCAAAGCATTTGATCCTAATGAGGCTTACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGGGTATGAACCACATTCTGTTTGGCCTATTGGGGCGGTTGCCCTTGCTGATCTTACAGGTTTCATGCCTCTCCCAAAAATCAAAGTGCTTGCGAGTACTGCT.......................................................................................GTGTTTTATACACCTTTCTTGCGGCATATCTGGACATGGTTAGGACTTGCACCAATAACAAGGAAAAATTTTAAATCCCTCTTGGCATCTGGTTACAGCTGCATCATAGTGCCAGGTGGAGTTCAAGAAACATTCTATATGGAACACGGTTCAGAG................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTTACCTTCAAAAAAG-AAAGGATTTGTACGAATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E688641" ref_strand="+" ref_description="SGN-E688641 [t3_tus_54_E10]">
      <seq>tggtcttatggcttggctccgtccatttcaacttcttaatacttattgcttcctttatttttcttcctttctctaaaacagtcatagttataggaatattgcttatacttattctcattccgattgatgagaaaaataattttgggcgaagattagctaggtacatctgtaagcatgcttgtggctattttccggtccatttgtatgtagaggatatcaaagcatttgatcctaatgaggcttacgtttttgggtatgaaccacattctgtttggcctattggggcggttgcccttgctgatcttacaggtttcatgcctctcccaaaaatcaaagtgcttgcgagtactgctgtgttttatacacctttcttgcggcatatctggacatggttaggacttgcaccaataacaaggaaaaattttaaatccctcttggcatctggttacagctgcatcatagtgccaggtggagttcaagaaacattctatatggaacacggttcagagattgcttaccttcnaaaaagaaaaggatttgtacgaattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="89958" stop="86459"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89658" g_stop="89574" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89573" i_stop="89471" i_length="103">
            <donor d_prob="0.791" d_score="1.00"/>
            <acceptor a_prob="0.883" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89470" g_stop="89396" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="160" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89395" i_stop="89296" i_length="100">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89295" g_stop="89210" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="246" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89209" i_stop="87565" i_length="1645">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87564" g_stop="87458" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="353" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="87457" i_stop="87371" i_length="87">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.052" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="87370" g_stop="87215" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="509" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="87214" i_stop="86799" i_length="416">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.369" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="86798" g_stop="86759" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="510" r_stop="549" r_length="40" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E688641" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E688641" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89658" e_stop="89574"/>
          <exon e_start="89470" e_stop="89396"/>
          <exon e_start="89295" e_stop="89210"/>
          <exon e_start="87564" e_stop="87458"/>
          <exon e_start="87370" e_stop="87215"/>
          <exon e_start="86798" e_stop="86759"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTCTTATGGCTTGGCTCCGTCCATTTCAACTTCTTAATACTTATTGCTTCCTTTATTTTTCTTCCTTTCTCTAAAACAGTCATGTTAGTTTTCTCTTTACTTTCTCTCTACCTCTTATTTCCATCTGCCTAGTAGTTTGGATTTGAGTTTGAGTTTGACTTTAGTCTTGATAAAATTTTGTTTCAGAGTTATAGGAATATTGCTTATACTTATTCTCATTCCGATTGATGAGAAAAATAATTTTGGGCGAAGATTAGCTAGGTAAGTGATTTTTTGTTGGTGCAATTTAGTATTTATCTGATTAAGTGGAAACTATTGATTTTCTGCTGTATTATTGATGCTGAAAATTGGGGTTCTTCAGGTACATCTGTAAGCATGCTTGTGGCTATTTTCCGGTCCATTTGTATGTAGAGGATATCAAAGCATTTGATCCTAATGAGGCTTACGGTAAATCAGTGATTATATTCATCCTTGATAAGAATAAATAAATCAACTTTCTTTAATTTGATTTGGGGGTTGGGGAATCAACTAATTCCTATTGTGAATTACTTTTTTCTCTTATGTATGAGAAGTTACTTGCACAGTGTTTCTGCTATAGTTGGTTTGTATATCTGCAGCTGTCTCGTCAGCGGAAGGATACCATTTTAAGAAATTATCAATTTGCGAAAAATTGTAATCCCACTTTTCTATTTTAGGCAGACTCCAATAAAATATCAGGGGCTGATTAAAGTTTATACTTTTGTGTGCGCTCATTAACTTGCAATTCACTTGATCACTTGGAAACATGGGGATTACCAAGCTATCTACACGCAGCATAATGTCGTACATTTCTTGGCATAATTGTGTGATTGCTGTCATGTAACTATGTTGCTTCCTCTGTTTCATTTTGTCTAGTTTTGAGTTGATATGGAGTTTAAAGAAGTATAGAAAACTTTCTATACTTGTAGTCTTAAACTGAAGATACGTAGAATATTCCAAAATGTTCTTTAATCTTAAACATGTTGCATGAAAAATTAGAATTTAAGTGTTACAGAAAGAAAGAGGAAAATATGCGTTCTTTTTTAAATGAGACTAAACATGAAAGTAAAATAAACAAACAGAAAACGGAGGGAATAAATTGAAGGTAATAACCAAGTCAACTGCAATCTCAATCAAAACAGTGATTAGTGGGCTTGCTTCAACATAAGTTAACCAATGCTATTGCTTTTAGATGACGAGTTATGTAAACCTTTGTCAGCTTGGGAGACTTGCTTTTGTCTAAACCATAGTTGACTTCTAACTAGCATAATTTGTCTAGAAAATTCTCCTTTGATGTGCTTCTCTTGATAAATTTCTCTTGCTATAGCAACCTCCATTGTTAGGAGCATAGCTTCTCAGTTTTTGTATCTACTTGCCGAGACCGGATGGAACATTATTTTGTTTCATTTTCTTATTAGCTCAAACACTCAGCTTTTCTCTGTGACTCTTTCTAAAGCTTTTCTATGTCATTTGACTCAGATTCCATTTTCTTGGGTGTCTTGTGAAGAATTAAATTAGAAAGGTTTAAAACTATATCACATGGTCTTGGCCCTCAAGTGTTGGCGTGTGAAATTTGCATTTCTAGAACATCGAATATAGGACCATAACAAGAAAATTTTTCCTTCGAAGTAAAATACTTTATAAGGATTTGAAAGTATGTTTGAAAGATAATAGAACAAATGCGTATACTTCAATAATTAAGGGGCCAAATGAAAAGAAATCCTCCTGTGCTCTTGCTTTCTTGGTCCTCTTCTCTTACTCTGTTGCTTTGTTGAGTATTCTATAGTTCGGGTAATTCAGTCCTTAAATCTTTATTTTCCTTGCTTGCTTATGTTCTAAAATTTCCTCTTTTGTTTTTTCTTGTTTCTTTTCTTTACTGTGAATAATAATATATTACTCCCATTATCCACTTCTTTTTCTTCGGGCACTTGCTCACATCCTTTCCATTGTAGGCAGATGATATCTGTTTCTACAAGGAACTAGATACATCATTCTGAGTGCTAGTCGCATTAATGGAAAATCAGAAATCTTCAGTTCCTGTTCTTCAGACTAACTCAGATGTTGTTACTTACAGTTTTTGGGTATGAACCACATTCTGTTTGGCCTATTGGGGCGGTTGCCCTTGCTGATCTTACAGGTTTCATGCCTCTCCCAAAAATCAAAGTGCTTGCGAGTACTGCTGTATGACTTGATTCCTTGTTCTTATATTTTAATTGTACATAAGTCTTATTTTCAGCTGTAGCATTTACTATGAAGAAACATTGACAGGTGTTTTATACACCTTTCTTGCGGCATATCTGGACATGGTTAGGACTTGCACCAATAACAAGGAAAAATTTTAAATCCCTCTTGGCATCTGGTTACAGCTGCATCATAGTGCCAGGTGGAGTTCAAGAAACATTCTATATGGAACACGGTTCAGAGGTTCAATCTCTAAACTTGATTGTATTTTCCAAACCAGTATATTATGCTGTACTCACCACATTTCTTCCTAACTCCTGGTAAGACCAAGTAGATGCACCCACAAAAAGGAGTTTTGATCAGGAATAACTAGTAGGAACTCATCAAAAGAGTATATAAGCTCTACTCTCTTTTCAACAAGTACTCTCTTCATTGGCTTGTAAACGACTTGATATTTAAGGAAAGAGATCTAGTTTTTCTTTCTTATGTGACCAGAAATTAAAGTATGTTTGGTGATGGCATGGTAAAAAAATTTCTATGAATCTTATGTTCCTTTTGGGTAAAACAATGTGCGAAATTGAGATTATTTCATATTCTTTAATGTGTGTGCTGGGCTAGAGAGGGGTTAAATCTTATTGCTCTCTTAACCTGTGATATAGATTGCTTACCTTCAAAAAAGAAAAGGATTTGTACGAATTG</genome_strand>
        <mrna_strand>TGGTCTTATGGCTTGGCTCCGTCCATTTCAACTTCTTAATACTTATTGCTTCCTTTATTTTTCTTCCTTTCTCTAAAACAGTCAT.......................................................................................................AGTTATAGGAATATTGCTTATACTTATTCTCATTCCGATTGATGAGAAAAATAATTTTGGGCGAAGATTAGCTAG....................................................................................................GTACATCTGTAAGCATGCTTGTGGCTATTTTCCGGTCCATTTGTATGTAGAGGATATCAAAGCATTTGATCCTAATGAGGCTTACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGGGTATGAACCACATTCTGTTTGGCCTATTGGGGCGGTTGCCCTTGCTGATCTTACAGGTTTCATGCCTCTCCCAAAAATCAAAGTGCTTGCGAGTACTGCT.......................................................................................GTGTTTTATACACCTTTCTTGCGGCATATCTGGACATGGTTAGGACTTGCACCAATAACAAGGAAAAATTTTAAATCCCTCTTGGCATCTGGTTACAGCTGCATCATAGTGCCAGGTGGAGTTCAAGAAACATTCTATATGGAACACGGTTCAGAG................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTTACCTTCNAAAAAGAAAAGGATTTGTACGAATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E551447" ref_strand="+" ref_description="SGN-E551447 [TUS-54-F7]">
      <seq>tggtcttatggcttggctccgtccatttcaacttcttaatacttattgcttcctttatttttcttcctttctctaaaacagtcatagttataggaatattgcttatacttattctcattccgattgatgagaaaaataattttgggcgaagattagctaggtacatctgtaagcatgcttgtggctattttccggtccatttgtatgtagaggatatcaaagcatttgatcctaatgaggcttacgtttttgggtatgaaccacattctgtttggcctattggggcggttgcccttgctgatcttacaggtttcatgcctctcccaaaaatcaaagtgcttgcgagtactgctgtgttttatacacctttcttgcggcatatctggacatggttaggacttgcaccaataacaaggaaaaattttaaatccctcttggcatctggttacagctgcatcatagtgccaggtggagttcaagaaacattctatatggaacacggttcagagattgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="89958" stop="86912"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89658" g_stop="89574" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89573" i_stop="89471" i_length="103">
            <donor d_prob="0.791" d_score="1.00"/>
            <acceptor a_prob="0.883" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89470" g_stop="89396" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="160" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89395" i_stop="89296" i_length="100">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89295" g_stop="89210" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="246" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89209" i_stop="87565" i_length="1645">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87564" g_stop="87458" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="353" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="87457" i_stop="87371" i_length="87">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.052" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="87370" g_stop="87215" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="509" r_length="156" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E551447" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E551447" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89658" e_stop="89574"/>
          <exon e_start="89470" e_stop="89396"/>
          <exon e_start="89295" e_stop="89210"/>
          <exon e_start="87564" e_stop="87458"/>
          <exon e_start="87370" e_stop="87215"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTCTTATGGCTTGGCTCCGTCCATTTCAACTTCTTAATACTTATTGCTTCCTTTATTTTTCTTCCTTTCTCTAAAACAGTCATGTTAGTTTTCTCTTTACTTTCTCTCTACCTCTTATTTCCATCTGCCTAGTAGTTTGGATTTGAGTTTGAGTTTGACTTTAGTCTTGATAAAATTTTGTTTCAGAGTTATAGGAATATTGCTTATACTTATTCTCATTCCGATTGATGAGAAAAATAATTTTGGGCGAAGATTAGCTAGGTAAGTGATTTTTTGTTGGTGCAATTTAGTATTTATCTGATTAAGTGGAAACTATTGATTTTCTGCTGTATTATTGATGCTGAAAATTGGGGTTCTTCAGGTACATCTGTAAGCATGCTTGTGGCTATTTTCCGGTCCATTTGTATGTAGAGGATATCAAAGCATTTGATCCTAATGAGGCTTACGGTAAATCAGTGATTATATTCATCCTTGATAAGAATAAATAAATCAACTTTCTTTAATTTGATTTGGGGGTTGGGGAATCAACTAATTCCTATTGTGAATTACTTTTTTCTCTTATGTATGAGAAGTTACTTGCACAGTGTTTCTGCTATAGTTGGTTTGTATATCTGCAGCTGTCTCGTCAGCGGAAGGATACCATTTTAAGAAATTATCAATTTGCGAAAAATTGTAATCCCACTTTTCTATTTTAGGCAGACTCCAATAAAATATCAGGGGCTGATTAAAGTTTATACTTTTGTGTGCGCTCATTAACTTGCAATTCACTTGATCACTTGGAAACATGGGGATTACCAAGCTATCTACACGCAGCATAATGTCGTACATTTCTTGGCATAATTGTGTGATTGCTGTCATGTAACTATGTTGCTTCCTCTGTTTCATTTTGTCTAGTTTTGAGTTGATATGGAGTTTAAAGAAGTATAGAAAACTTTCTATACTTGTAGTCTTAAACTGAAGATACGTAGAATATTCCAAAATGTTCTTTAATCTTAAACATGTTGCATGAAAAATTAGAATTTAAGTGTTACAGAAAGAAAGAGGAAAATATGCGTTCTTTTTTAAATGAGACTAAACATGAAAGTAAAATAAACAAACAGAAAACGGAGGGAATAAATTGAAGGTAATAACCAAGTCAACTGCAATCTCAATCAAAACAGTGATTAGTGGGCTTGCTTCAACATAAGTTAACCAATGCTATTGCTTTTAGATGACGAGTTATGTAAACCTTTGTCAGCTTGGGAGACTTGCTTTTGTCTAAACCATAGTTGACTTCTAACTAGCATAATTTGTCTAGAAAATTCTCCTTTGATGTGCTTCTCTTGATAAATTTCTCTTGCTATAGCAACCTCCATTGTTAGGAGCATAGCTTCTCAGTTTTTGTATCTACTTGCCGAGACCGGATGGAACATTATTTTGTTTCATTTTCTTATTAGCTCAAACACTCAGCTTTTCTCTGTGACTCTTTCTAAAGCTTTTCTATGTCATTTGACTCAGATTCCATTTTCTTGGGTGTCTTGTGAAGAATTAAATTAGAAAGGTTTAAAACTATATCACATGGTCTTGGCCCTCAAGTGTTGGCGTGTGAAATTTGCATTTCTAGAACATCGAATATAGGACCATAACAAGAAAATTTTTCCTTCGAAGTAAAATACTTTATAAGGATTTGAAAGTATGTTTGAAAGATAATAGAACAAATGCGTATACTTCAATAATTAAGGGGCCAAATGAAAAGAAATCCTCCTGTGCTCTTGCTTTCTTGGTCCTCTTCTCTTACTCTGTTGCTTTGTTGAGTATTCTATAGTTCGGGTAATTCAGTCCTTAAATCTTTATTTTCCTTGCTTGCTTATGTTCTAAAATTTCCTCTTTTGTTTTTTCTTGTTTCTTTTCTTTACTGTGAATAATAATATATTACTCCCATTATCCACTTCTTTTTCTTCGGGCACTTGCTCACATCCTTTCCATTGTAGGCAGATGATATCTGTTTCTACAAGGAACTAGATACATCATTCTGAGTGCTAGTCGCATTAATGGAAAATCAGAAATCTTCAGTTCCTGTTCTTCAGACTAACTCAGATGTTGTTACTTACAGTTTTTGGGTATGAACCACATTCTGTTTGGCCTATTGGGGCGGTTGCCCTTGCTGATCTTACAGGTTTCATGCCTCTCCCAAAAATCAAAGTGCTTGCGAGTACTGCTGTATGACTTGATTCCTTGTTCTTATATTTTAATTGTACATAAGTCTTATTTTCAGCTGTAGCATTTACTATGAAGAAACATTGACAGGTGTTTTATACACCTTTCTTGCGGCATATCTGGACATGGTTAGGACTTGCACCAATAACAAGGAAAAATTTTAAATCCCTCTTGGCATCTGGTTACAGCTGCATCATAGTGCCAGGTGGAGTTCAAGAAACATTCTATATGGAACACGGTTCAGAG</genome_strand>
        <mrna_strand>TGGTCTTATGGCTTGGCTCCGTCCATTTCAACTTCTTAATACTTATTGCTTCCTTTATTTTTCTTCCTTTCTCTAAAACAGTCAT.......................................................................................................AGTTATAGGAATATTGCTTATACTTATTCTCATTCCGATTGATGAGAAAAATAATTTTGGGCGAAGATTAGCTAG....................................................................................................GTACATCTGTAAGCATGCTTGTGGCTATTTTCCGGTCCATTTGTATGTAGAGGATATCAAAGCATTTGATCCTAATGAGGCTTACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGGGTATGAACCACATTCTGTTTGGCCTATTGGGGCGGTTGCCCTTGCTGATCTTACAGGTTTCATGCCTCTCCCAAAAATCAAAGTGCTTGCGAGTACTGCT.......................................................................................GTGTTTTATACACCTTTCTTGCGGCATATCTGGACATGGTTAGGACTTGCACCAATAACAAGGAAAAATTTTAAATCCCTCTTGGCATCTGGTTACAGCTGCATCATAGTGCCAGGTGGAGTTCAAGAAACATTCTATATGGAACACGGTTCAGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E688655" ref_strand="+" ref_description="SGN-E688655 [t3_tus_54_F07]">
      <seq>tggtcttatggcttggctccgtccatttcaacttcttaatacttattgcttcctttatttttcttcctttctctaaaacagtcatagttataggaatattgcttatacttattctcattccgattgatgagaaaaataattttgggcgaagattagctaggtacatctgtaagcatgcttgtggctattttccggtccatttgtatgtagaggatatcaaagcatttgatcctaatgaggcttacgtttttgggtatgaaccacattctgtttggcctattggggcggttgcccttgctgatcttacaggtttcatgcctctcccaaaaatcaaagtgcttgcgagtactgctgtgttttatacacctttcttgcggcatatctggacatggttaggacttgcaccaataacaaggaaaaattttaaatccctcttggcatctggttacagctgcatcatagtgccaggtggagttcaagaaacattctatatggaacacggttcagagattgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="89958" stop="86912"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89658" g_stop="89574" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89573" i_stop="89471" i_length="103">
            <donor d_prob="0.791" d_score="1.00"/>
            <acceptor a_prob="0.883" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89470" g_stop="89396" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="160" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89395" i_stop="89296" i_length="100">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89295" g_stop="89210" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="246" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89209" i_stop="87565" i_length="1645">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87564" g_stop="87458" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="353" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="87457" i_stop="87371" i_length="87">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.052" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="87370" g_stop="87215" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="509" r_length="156" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E688655" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E688655" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89658" e_stop="89574"/>
          <exon e_start="89470" e_stop="89396"/>
          <exon e_start="89295" e_stop="89210"/>
          <exon e_start="87564" e_stop="87458"/>
          <exon e_start="87370" e_stop="87215"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTCTTATGGCTTGGCTCCGTCCATTTCAACTTCTTAATACTTATTGCTTCCTTTATTTTTCTTCCTTTCTCTAAAACAGTCATGTTAGTTTTCTCTTTACTTTCTCTCTACCTCTTATTTCCATCTGCCTAGTAGTTTGGATTTGAGTTTGAGTTTGACTTTAGTCTTGATAAAATTTTGTTTCAGAGTTATAGGAATATTGCTTATACTTATTCTCATTCCGATTGATGAGAAAAATAATTTTGGGCGAAGATTAGCTAGGTAAGTGATTTTTTGTTGGTGCAATTTAGTATTTATCTGATTAAGTGGAAACTATTGATTTTCTGCTGTATTATTGATGCTGAAAATTGGGGTTCTTCAGGTACATCTGTAAGCATGCTTGTGGCTATTTTCCGGTCCATTTGTATGTAGAGGATATCAAAGCATTTGATCCTAATGAGGCTTACGGTAAATCAGTGATTATATTCATCCTTGATAAGAATAAATAAATCAACTTTCTTTAATTTGATTTGGGGGTTGGGGAATCAACTAATTCCTATTGTGAATTACTTTTTTCTCTTATGTATGAGAAGTTACTTGCACAGTGTTTCTGCTATAGTTGGTTTGTATATCTGCAGCTGTCTCGTCAGCGGAAGGATACCATTTTAAGAAATTATCAATTTGCGAAAAATTGTAATCCCACTTTTCTATTTTAGGCAGACTCCAATAAAATATCAGGGGCTGATTAAAGTTTATACTTTTGTGTGCGCTCATTAACTTGCAATTCACTTGATCACTTGGAAACATGGGGATTACCAAGCTATCTACACGCAGCATAATGTCGTACATTTCTTGGCATAATTGTGTGATTGCTGTCATGTAACTATGTTGCTTCCTCTGTTTCATTTTGTCTAGTTTTGAGTTGATATGGAGTTTAAAGAAGTATAGAAAACTTTCTATACTTGTAGTCTTAAACTGAAGATACGTAGAATATTCCAAAATGTTCTTTAATCTTAAACATGTTGCATGAAAAATTAGAATTTAAGTGTTACAGAAAGAAAGAGGAAAATATGCGTTCTTTTTTAAATGAGACTAAACATGAAAGTAAAATAAACAAACAGAAAACGGAGGGAATAAATTGAAGGTAATAACCAAGTCAACTGCAATCTCAATCAAAACAGTGATTAGTGGGCTTGCTTCAACATAAGTTAACCAATGCTATTGCTTTTAGATGACGAGTTATGTAAACCTTTGTCAGCTTGGGAGACTTGCTTTTGTCTAAACCATAGTTGACTTCTAACTAGCATAATTTGTCTAGAAAATTCTCCTTTGATGTGCTTCTCTTGATAAATTTCTCTTGCTATAGCAACCTCCATTGTTAGGAGCATAGCTTCTCAGTTTTTGTATCTACTTGCCGAGACCGGATGGAACATTATTTTGTTTCATTTTCTTATTAGCTCAAACACTCAGCTTTTCTCTGTGACTCTTTCTAAAGCTTTTCTATGTCATTTGACTCAGATTCCATTTTCTTGGGTGTCTTGTGAAGAATTAAATTAGAAAGGTTTAAAACTATATCACATGGTCTTGGCCCTCAAGTGTTGGCGTGTGAAATTTGCATTTCTAGAACATCGAATATAGGACCATAACAAGAAAATTTTTCCTTCGAAGTAAAATACTTTATAAGGATTTGAAAGTATGTTTGAAAGATAATAGAACAAATGCGTATACTTCAATAATTAAGGGGCCAAATGAAAAGAAATCCTCCTGTGCTCTTGCTTTCTTGGTCCTCTTCTCTTACTCTGTTGCTTTGTTGAGTATTCTATAGTTCGGGTAATTCAGTCCTTAAATCTTTATTTTCCTTGCTTGCTTATGTTCTAAAATTTCCTCTTTTGTTTTTTCTTGTTTCTTTTCTTTACTGTGAATAATAATATATTACTCCCATTATCCACTTCTTTTTCTTCGGGCACTTGCTCACATCCTTTCCATTGTAGGCAGATGATATCTGTTTCTACAAGGAACTAGATACATCATTCTGAGTGCTAGTCGCATTAATGGAAAATCAGAAATCTTCAGTTCCTGTTCTTCAGACTAACTCAGATGTTGTTACTTACAGTTTTTGGGTATGAACCACATTCTGTTTGGCCTATTGGGGCGGTTGCCCTTGCTGATCTTACAGGTTTCATGCCTCTCCCAAAAATCAAAGTGCTTGCGAGTACTGCTGTATGACTTGATTCCTTGTTCTTATATTTTAATTGTACATAAGTCTTATTTTCAGCTGTAGCATTTACTATGAAGAAACATTGACAGGTGTTTTATACACCTTTCTTGCGGCATATCTGGACATGGTTAGGACTTGCACCAATAACAAGGAAAAATTTTAAATCCCTCTTGGCATCTGGTTACAGCTGCATCATAGTGCCAGGTGGAGTTCAAGAAACATTCTATATGGAACACGGTTCAGAG</genome_strand>
        <mrna_strand>TGGTCTTATGGCTTGGCTCCGTCCATTTCAACTTCTTAATACTTATTGCTTCCTTTATTTTTCTTCCTTTCTCTAAAACAGTCAT.......................................................................................................AGTTATAGGAATATTGCTTATACTTATTCTCATTCCGATTGATGAGAAAAATAATTTTGGGCGAAGATTAGCTAG....................................................................................................GTACATCTGTAAGCATGCTTGTGGCTATTTTCCGGTCCATTTGTATGTAGAGGATATCAAAGCATTTGATCCTAATGAGGCTTACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGGGTATGAACCACATTCTGTTTGGCCTATTGGGGCGGTTGCCCTTGCTGATCTTACAGGTTTCATGCCTCTCCCAAAAATCAAAGTGCTTGCGAGTACTGCT.......................................................................................GTGTTTTATACACCTTTCTTGCGGCATATCTGGACATGGTTAGGACTTGCACCAATAACAAGGAAAAATTTTAAATCCCTCTTGGCATCTGGTTACAGCTGCATCATAGTGCCAGGTGGAGTTCAAGAAACATTCTATATGGAACACGGTTCAGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E311820" ref_strand="+" ref_description="SGN-E311820 [cLEZ-9-B14]">
      <seq>cgggtcattattgcatactgtattggcgttggtcttatggcttggctccgtccatttcaacttcttaatacttattgcttcctttatttttcttcctttctctaaaacagtcatagttataggaatattgcttatacttattctcattccgattgatgagaaaaataattttgggcgaagattagctaggtacatctgtaagcatgcttgtggctattttccggtccatttgtatgtagaggatatcaaagcatttgatcctaatgaggcttacgtttttgggtatgaaccacattctgtttggcctattggggcggttgcccttgctgatcttacaggtttcatgcctctcccaaaaatcaaagtgcttgcgagtactgctgtgttttatacacctttcttgcggcatatctggacatggttaggacttgcaccaataacaaggaaaaattttaaatccctcttggcatctggttacagctgcatcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="89987" stop="86964"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89687" g_stop="89574" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89573" i_stop="89471" i_length="103">
            <donor d_prob="0.791" d_score="1.00"/>
            <acceptor a_prob="0.883" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89470" g_stop="89396" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="189" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89395" i_stop="89296" i_length="100">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89295" g_stop="89210" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="275" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89209" i_stop="87565" i_length="1645">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87564" g_stop="87458" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="382" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="87457" i_stop="87371" i_length="87">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.052" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="87370" g_stop="87264" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="489" r_length="107" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E311820" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E311820" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89687" e_stop="89574"/>
          <exon e_start="89470" e_stop="89396"/>
          <exon e_start="89295" e_stop="89210"/>
          <exon e_start="87564" e_stop="87458"/>
          <exon e_start="87370" e_stop="87264"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGGTCATTATTGCATACTGTATTGGCGTTGGTCTTATGGCTTGGCTCCGTCCATTTCAACTTCTTAATACTTATTGCTTCCTTTATTTTTCTTCCTTTCTCTAAAACAGTCATGTTAGTTTTCTCTTTACTTTCTCTCTACCTCTTATTTCCATCTGCCTAGTAGTTTGGATTTGAGTTTGAGTTTGACTTTAGTCTTGATAAAATTTTGTTTCAGAGTTATAGGAATATTGCTTATACTTATTCTCATTCCGATTGATGAGAAAAATAATTTTGGGCGAAGATTAGCTAGGTAAGTGATTTTTTGTTGGTGCAATTTAGTATTTATCTGATTAAGTGGAAACTATTGATTTTCTGCTGTATTATTGATGCTGAAAATTGGGGTTCTTCAGGTACATCTGTAAGCATGCTTGTGGCTATTTTCCGGTCCATTTGTATGTAGAGGATATCAAAGCATTTGATCCTAATGAGGCTTACGGTAAATCAGTGATTATATTCATCCTTGATAAGAATAAATAAATCAACTTTCTTTAATTTGATTTGGGGGTTGGGGAATCAACTAATTCCTATTGTGAATTACTTTTTTCTCTTATGTATGAGAAGTTACTTGCACAGTGTTTCTGCTATAGTTGGTTTGTATATCTGCAGCTGTCTCGTCAGCGGAAGGATACCATTTTAAGAAATTATCAATTTGCGAAAAATTGTAATCCCACTTTTCTATTTTAGGCAGACTCCAATAAAATATCAGGGGCTGATTAAAGTTTATACTTTTGTGTGCGCTCATTAACTTGCAATTCACTTGATCACTTGGAAACATGGGGATTACCAAGCTATCTACACGCAGCATAATGTCGTACATTTCTTGGCATAATTGTGTGATTGCTGTCATGTAACTATGTTGCTTCCTCTGTTTCATTTTGTCTAGTTTTGAGTTGATATGGAGTTTAAAGAAGTATAGAAAACTTTCTATACTTGTAGTCTTAAACTGAAGATACGTAGAATATTCCAAAATGTTCTTTAATCTTAAACATGTTGCATGAAAAATTAGAATTTAAGTGTTACAGAAAGAAAGAGGAAAATATGCGTTCTTTTTTAAATGAGACTAAACATGAAAGTAAAATAAACAAACAGAAAACGGAGGGAATAAATTGAAGGTAATAACCAAGTCAACTGCAATCTCAATCAAAACAGTGATTAGTGGGCTTGCTTCAACATAAGTTAACCAATGCTATTGCTTTTAGATGACGAGTTATGTAAACCTTTGTCAGCTTGGGAGACTTGCTTTTGTCTAAACCATAGTTGACTTCTAACTAGCATAATTTGTCTAGAAAATTCTCCTTTGATGTGCTTCTCTTGATAAATTTCTCTTGCTATAGCAACCTCCATTGTTAGGAGCATAGCTTCTCAGTTTTTGTATCTACTTGCCGAGACCGGATGGAACATTATTTTGTTTCATTTTCTTATTAGCTCAAACACTCAGCTTTTCTCTGTGACTCTTTCTAAAGCTTTTCTATGTCATTTGACTCAGATTCCATTTTCTTGGGTGTCTTGTGAAGAATTAAATTAGAAAGGTTTAAAACTATATCACATGGTCTTGGCCCTCAAGTGTTGGCGTGTGAAATTTGCATTTCTAGAACATCGAATATAGGACCATAACAAGAAAATTTTTCCTTCGAAGTAAAATACTTTATAAGGATTTGAAAGTATGTTTGAAAGATAATAGAACAAATGCGTATACTTCAATAATTAAGGGGCCAAATGAAAAGAAATCCTCCTGTGCTCTTGCTTTCTTGGTCCTCTTCTCTTACTCTGTTGCTTTGTTGAGTATTCTATAGTTCGGGTAATTCAGTCCTTAAATCTTTATTTTCCTTGCTTGCTTATGTTCTAAAATTTCCTCTTTTGTTTTTTCTTGTTTCTTTTCTTTACTGTGAATAATAATATATTACTCCCATTATCCACTTCTTTTTCTTCGGGCACTTGCTCACATCCTTTCCATTGTAGGCAGATGATATCTGTTTCTACAAGGAACTAGATACATCATTCTGAGTGCTAGTCGCATTAATGGAAAATCAGAAATCTTCAGTTCCTGTTCTTCAGACTAACTCAGATGTTGTTACTTACAGTTTTTGGGTATGAACCACATTCTGTTTGGCCTATTGGGGCGGTTGCCCTTGCTGATCTTACAGGTTTCATGCCTCTCCCAAAAATCAAAGTGCTTGCGAGTACTGCTGTATGACTTGATTCCTTGTTCTTATATTTTAATTGTACATAAGTCTTATTTTCAGCTGTAGCATTTACTATGAAGAAACATTGACAGGTGTTTTATACACCTTTCTTGCGGCATATCTGGACATGGTTAGGACTTGCACCAATAACAAGGAAAAATTTTAAATCCCTCTTGGCATCTGGTTACAGCTGCATCAT</genome_strand>
        <mrna_strand>CGGGTCATTATTGCATACTGTATTGGCGTTGGTCTTATGGCTTGGCTCCGTCCATTTCAACTTCTTAATACTTATTGCTTCCTTTATTTTTCTTCCTTTCTCTAAAACAGTCAT.......................................................................................................AGTTATAGGAATATTGCTTATACTTATTCTCATTCCGATTGATGAGAAAAATAATTTTGGGCGAAGATTAGCTAG....................................................................................................GTACATCTGTAAGCATGCTTGTGGCTATTTTCCGGTCCATTTGTATGTAGAGGATATCAAAGCATTTGATCCTAATGAGGCTTACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGGGTATGAACCACATTCTGTTTGGCCTATTGGGGCGGTTGCCCTTGCTGATCTTACAGGTTTCATGCCTCTCCCAAAAATCAAAGTGCTTGCGAGTACTGCT.......................................................................................GTGTTTTATACACCTTTCTTGCGGCATATCTGGACATGGTTAGGACTTGCACCAATAACAAGGAAAAATTTTAAATCCCTCTTGGCATCTGGTTACAGCTGCATCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E724292" ref_strand="+" ref_description="SGN-E724292 [FC23CF10]">
      <seq>acttgcataattccccattttctttctataaatttataatcaattcagtaatttcatatttatttttttctgttttattcgtttcgatttggattttcacccatggctatacaagaggataattcaataattcatcaacagccggcgccgccgtcagctccgacgccggtggagtttaaaggggcaaattccgggtcattattgcatactgtattggcgttggtcttatggcttggctccgtccatttcaacttcttaatacttattgcttcctttatttttcttcctttctctaaaacagtcatagttataggaatattgcttatacttattctcattccgattgatgagaaaaataattttgggcgaagattagctaggtacatctgtaagcatgcttgtggctattttccggtccatttgtatgtagaggatatcaaagcatttgatcctaatgaggcttacgtttttgggtatgaaccacattctgtttggcctattggggcggttgcccttgctgatcttacaggtttcatgcctctcccaaaaatcaaagtgcttgcaagtactgctgtgttttatacccctttcttgcggcatatctggacatggttagggacttgcaccaataacaaggaaaaattttaaatccctcttggcatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="90177" stop="86980"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89877" g_stop="89574" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="305" r_length="305" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89573" i_stop="89471" i_length="103">
            <donor d_prob="0.791" d_score="1.00"/>
            <acceptor a_prob="0.883" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89470" g_stop="89396" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="380" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89395" i_stop="89296" i_length="100">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89295" g_stop="89210" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="466" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89209" i_stop="87565" i_length="1645">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87564" g_stop="87458" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="573" r_length="107" r_score="0.991"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="87457" i_stop="87371" i_length="87">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.052" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="87370" g_stop="87280" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="574" r_stop="665" r_length="92" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E724292" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>663</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E724292" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89877" e_stop="89574"/>
          <exon e_start="89470" e_stop="89396"/>
          <exon e_start="89295" e_stop="89210"/>
          <exon e_start="87564" e_stop="87458"/>
          <exon e_start="87370" e_stop="87280"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AC-TGCATAATTCCCTACTTTCTTTCTATAAATTTATAATCAATTCAGTAATTTCATATTTATTTTTTTCTGTTTTATTCGTTTCGATTTGGATTTTCACCCATGGCTATACAAGAGGATAATTCAATAATTCATCAACAGCCGGCGCCGCCGTCAGCTCCGACGCCGGTGGAGTTTAAAGGGGCAAATTCCGGGTCATTATTGCATACTGTATTGGCGTTGGTCTTATGGCTTGGCTCCGTCCATTTCAACTTCTTAATACTTATTGCTTCCTTTATTTTTCTTCCTTTCTCTAAAACAGTCATGTTAGTTTTCTCTTTACTTTCTCTCTACCTCTTATTTCCATCTGCCTAGTAGTTTGGATTTGAGTTTGAGTTTGACTTTAGTCTTGATAAAATTTTGTTTCAGAGTTATAGGAATATTGCTTATACTTATTCTCATTCCGATTGATGAGAAAAATAATTTTGGGCGAAGATTAGCTAGGTAAGTGATTTTTTGTTGGTGCAATTTAGTATTTATCTGATTAAGTGGAAACTATTGATTTTCTGCTGTATTATTGATGCTGAAAATTGGGGTTCTTCAGGTACATCTGTAAGCATGCTTGTGGCTATTTTCCGGTCCATTTGTATGTAGAGGATATCAAAGCATTTGATCCTAATGAGGCTTACGGTAAATCAGTGATTATATTCATCCTTGATAAGAATAAATAAATCAACTTTCTTTAATTTGATTTGGGGGTTGGGGAATCAACTAATTCCTATTGTGAATTACTTTTTTCTCTTATGTATGAGAAGTTACTTGCACAGTGTTTCTGCTATAGTTGGTTTGTATATCTGCAGCTGTCTCGTCAGCGGAAGGATACCATTTTAAGAAATTATCAATTTGCGAAAAATTGTAATCCCACTTTTCTATTTTAGGCAGACTCCAATAAAATATCAGGGGCTGATTAAAGTTTATACTTTTGTGTGCGCTCATTAACTTGCAATTCACTTGATCACTTGGAAACATGGGGATTACCAAGCTATCTACACGCAGCATAATGTCGTACATTTCTTGGCATAATTGTGTGATTGCTGTCATGTAACTATGTTGCTTCCTCTGTTTCATTTTGTCTAGTTTTGAGTTGATATGGAGTTTAAAGAAGTATAGAAAACTTTCTATACTTGTAGTCTTAAACTGAAGATACGTAGAATATTCCAAAATGTTCTTTAATCTTAAACATGTTGCATGAAAAATTAGAATTTAAGTGTTACAGAAAGAAAGAGGAAAATATGCGTTCTTTTTTAAATGAGACTAAACATGAAAGTAAAATAAACAAACAGAAAACGGAGGGAATAAATTGAAGGTAATAACCAAGTCAACTGCAATCTCAATCAAAACAGTGATTAGTGGGCTTGCTTCAACATAAGTTAACCAATGCTATTGCTTTTAGATGACGAGTTATGTAAACCTTTGTCAGCTTGGGAGACTTGCTTTTGTCTAAACCATAGTTGACTTCTAACTAGCATAATTTGTCTAGAAAATTCTCCTTTGATGTGCTTCTCTTGATAAATTTCTCTTGCTATAGCAACCTCCATTGTTAGGAGCATAGCTTCTCAGTTTTTGTATCTACTTGCCGAGACCGGATGGAACATTATTTTGTTTCATTTTCTTATTAGCTCAAACACTCAGCTTTTCTCTGTGACTCTTTCTAAAGCTTTTCTATGTCATTTGACTCAGATTCCATTTTCTTGGGTGTCTTGTGAAGAATTAAATTAGAAAGGTTTAAAACTATATCACATGGTCTTGGCCCTCAAGTGTTGGCGTGTGAAATTTGCATTTCTAGAACATCGAATATAGGACCATAACAAGAAAATTTTTCCTTCGAAGTAAAATACTTTATAAGGATTTGAAAGTATGTTTGAAAGATAATAGAACAAATGCGTATACTTCAATAATTAAGGGGCCAAATGAAAAGAAATCCTCCTGTGCTCTTGCTTTCTTGGTCCTCTTCTCTTACTCTGTTGCTTTGTTGAGTATTCTATAGTTCGGGTAATTCAGTCCTTAAATCTTTATTTTCCTTGCTTGCTTATGTTCTAAAATTTCCTCTTTTGTTTTTTCTTGTTTCTTTTCTTTACTGTGAATAATAATATATTACTCCCATTATCCACTTCTTTTTCTTCGGGCACTTGCTCACATCCTTTCCATTGTAGGCAGATGATATCTGTTTCTACAAGGAACTAGATACATCATTCTGAGTGCTAGTCGCATTAATGGAAAATCAGAAATCTTCAGTTCCTGTTCTTCAGACTAACTCAGATGTTGTTACTTACAGTTTTTGGGTATGAACCACATTCTGTTTGGCCTATTGGGGCGGTTGCCCTTGCTGATCTTACAGGTTTCATGCCTCTCCCAAAAATCAAAGTGCTTGCGAGTACTGCTGTATGACTTGATTCCTTGTTCTTATATTTTAATTGTACATAAGTCTTATTTTCAGCTGTAGCATTTACTATGAAGAAACATTGACAGGTGTTTTATACACCTTTCTTGCGGCATATCTGGACATGGTTA-GGACTTGCACCAATAACAAGGAAAAATTTTAAATCCCTCTTGGCATCTG</genome_strand>
        <mrna_strand>ACTTGCATAATTCCCCATTTTCTTTCTATAAATTTATAATCAATTCAGTAATTTCATATTTATTTTTTTCTGTTTTATTCGTTTCGATTTGGATTTTCACCCATGGCTATACAAGAGGATAATTCAATAATTCATCAACAGCCGGCGCCGCCGTCAGCTCCGACGCCGGTGGAGTTTAAAGGGGCAAATTCCGGGTCATTATTGCATACTGTATTGGCGTTGGTCTTATGGCTTGGCTCCGTCCATTTCAACTTCTTAATACTTATTGCTTCCTTTATTTTTCTTCCTTTCTCTAAAACAGTCAT.......................................................................................................AGTTATAGGAATATTGCTTATACTTATTCTCATTCCGATTGATGAGAAAAATAATTTTGGGCGAAGATTAGCTAG....................................................................................................GTACATCTGTAAGCATGCTTGTGGCTATTTTCCGGTCCATTTGTATGTAGAGGATATCAAAGCATTTGATCCTAATGAGGCTTACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGGGTATGAACCACATTCTGTTTGGCCTATTGGGGCGGTTGCCCTTGCTGATCTTACAGGTTTCATGCCTCTCCCAAAAATCAAAGTGCTTGCAAGTACTGCT.......................................................................................GTGTTTTATACCCCTTTCTTGCGGCATATCTGGACATGGTTAGGGACTTGCACCAATAACAAGGAAAAATTTTAAATCCCTCTTGGCATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E747324" ref_strand="+" ref_description="SGN-E747324 [GI|47104638]">
      <seq>ttttttttttttttgagtgaacctctttatctcttattcacaattgattgccatattccaccatgaaaatatacagtgcaaaaaacatcaacaaaaatggtggcattagcttcttcatctctctgcaattccccttcttcaattatccattcctcaaaaacatctatacccaatttcattacattctcttccttaagttattacaagaaaaggggaaaatcgcttgcaagtcgtagccttggaattgttgctgctactgaaggttctgttaacaaatctagtggaaaagatgaggaaaaacaagaagacccatcagttcctacatgggctaaacccggtacggatgagcctccaccatgggctagaaatgaagcacagaaagattcttcaagcattcaagttccattcgttgtttatttgcttgcttctgctgtcacagcaattgcagcgattggttctattttcgagtacacgaatcagaaacctgtgtttggagttttgggttcagatagtgttttttatgctccattgcttgggttctttgtgttcactggcattcccacttctgcattcctttggttcaaatcagtacaagttgctaacaaggaggctgaggaacaagaccgcagggatggatatatgtaacatctaatatgcaatctttaggtgatatctgcagcatcttatatgcatttttcagatgttgttgatggttgtttcctaaaatactatcatcgcaaatgaatactttctcgaggtttgttctttctagagcagcatgagtgtaaaaattgtcttctcaataccagttattccgctttatcaattctaaaagtctttaatcaccagatttgactatttccatctctcatttgaaaaaatagtttatcgatttgtggttagacaagttacttgctgatcttttggcacaacttgtgtaagttatccaccaatctggtgttgcttcttaactcttaacatatcgaccttggtaaatcactaattctctatcttgtccctcactaccaagacttaggagcttgaggctttggttcacaacgtatttactaataagttgtaataaatagtcaaaagaatattcaaataggtcctgtgagttaaatacatagcataacttacaagttcagtctactctcattttgatggtatatcagcacttattccttcctcttatttattaagtgaacgaaaaaagttcacactctaatagcatcatagcatgtattgtctgcttgccttcacatgtctttttggtttcaagtgtttgtacctaagaaaccagcaagtcatttgtttcttggaattgagtagtgatatctgcagaatggtttgatactacattctacatgttgtatttcatttctttgaaataggatcgatatagttcttaatctgaagactatctctaaagtatgcttatattgctttagtttactgtttctcatttttgtagtatctgcctgagaatttcttgaaaaactgatcgcgagctagtaaaaaaaaatgttcagtcgttccacaacattctctctccttcctcgttgtgctatcacacagaactctgaattttgcagtctacttcctttgagcttttcaactctctggggcggtgaagttcatccatttctccaagagaagagaaaagatagggaagcaacatcatatgaagtcatgtgaacacaacttttgtccctgtagggaggacaattgtatttttccctcagaaatgaactttaatatagaaatatgtcatgggcatttcgaatcagaaaggaacttcaatatagaaatatgtcatgggcatttcaaatataaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="103663" stop="100195"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103365" g_stop="102916" g_length="450"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="450" r_length="450" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102915" i_stop="102817" i_length="99">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102816" g_stop="102700" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="567" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102699" i_stop="101765" i_length="935">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.695" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101764" g_stop="100496" g_length="1269"/>
          <reference_exon_boundary r_type="cDNA" r_start="568" r_stop="1836" r_length="1269" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1837" polyA_stop="1852"/>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E747324" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1836</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E747324" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103365" e_stop="102916"/>
          <exon e_start="102816" e_stop="102700"/>
          <exon e_start="101764" e_stop="100496"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATATTTTTTTTTTGAGTGAACCTCTTTATCTCTTATTCACAATTGATTGCCATATTCCACCATGAAAATATACAGTGCAAAAAACATCAACAAAAATGGTGGCATTAGCTTCTTCATCTCTCTGCAATTCCCCTTCTTCAATTATCCATTCCTCAAAAACATCTATACCCAATTTCATTACATTCTCTTCCTTAAGTTATTACAAGAAAAGGGGAAAATCGCTTGCAAGTCGTAGCCTTGGAATTGTTGCTGCTACTGAAGGTTCTGTTAACAAATCTAGTGGAAAAGATGAGGAAAAACAAGAAGACCCATCAGTTCCTACATGGGCTAAACCCGGTACGGATGAGCCTCCACCATGGGCTAGAAATGAAGCACAGAAAGATTCTTCAAGCATTCAAGTTCCATTCGTTGTTTATTTGCTTGCTTCTGCTGTCACAGCAATTGCAGCGGTGAGTTTTTTTCTTTTAAATCAGGAATTTCATTTTCTAGTGGAGAAGTTTTTTGGGGTCATTATAAAGATTGATTCTTGATTGGGTTTTTGAGTGCAGATTGGTTCTATTTTCGAGTACACGAATCAGAAACCTGTGTTTGGAGTTTTGGGTTCAGATAGTGTTTTTTATGCTCCATTGCTTGGGTTCTTTGTGTTCACTGGCATTCCCACTTCTGTAAGTTGATTTATTTTTTTCTCTGTTCATGTCTTTCTGCTGTTTACGTTATGTTGAATTGTTTTGAATGATGAAACTAAGTTAGCGTTTGACCATAAATTTTGGACTAAATTTTGGTAATTTATATTTTGAATATCCGTTTGGCCGTGAAATTTGATTAGTTTTTGAAAATATGATCCTCAAAATACTTTTCAAGTTCCCAAAAGGGGCTTTTTTAGTTTTTGGGACTTCCACTCACGAGACATCAAATGTATGGCCAAATACAACTTTAAGTTCTAAAACTAACAACTTCAAAGAGTTTCTACCTCCGTCTTCAAATCTATGGCCAAACGGGAGCTTAAGACTATACAAATTTGGTCTTTTTGCAAGTTCTGTTTTCAACCCACTTGTAGGTGATTTACTGCCTGTATTTCCATATTTTAAGATAATGGTAGCTACTTCTGTTATTTAAATTATAAGGTAACAATTTCATTAATTGGAAAGAGGAACCAATGAAGAAGTTCCTTAATAGATCTTTGTTTTGTTAGTTACATTTCGGTTCAAAAATATTCCCTTGTTTCAATTTGTTTGTTCTAATTTCCATTTTAGTCCGTTTAAGAAAGAACAGGTTTTTCCTTTTCTAGAAATTCGGTAATTCTAACTTTCTATATGATATGTTTAAGACTACAAAATTCAAAAGATATTTTTACTTTCTTGAATTCCGTGCCAAGTTAATACTAGACAAACAAATTGGCTAAATATGCCAGTCTTGCCTGCATGGTGAGTACTGTATGGCTGGCATAATTTGTGGAACCTAACAGGGTTGGCTCCTCGGCCGACCCTCCATTTAAAAATAATAATAATAATAAAATCAGGGGAGTACTACTTTTGGCAAAAAGAAAAAGGAAAAGTTGATGTTTCTATATTCATTTGAGCTGATTAGAACATATATCCAGGCATTCCTTTGGTTCAAATCAGTACAAGTTGCTAACAAGGAGGCTGAGGAACAAGACCGCAGGGATGGATATATGTAACATCTAATATGCAATCTTTAGGTGATATCTGCAGCATCTTATATGCATTTTTCAGATGTTGTTGATGGTTGTTTCCTAAAATACTATCATCGCAAATGAATACTTTCTCGAGGTTTGTTCTTTCTAGAGCAGCATGAGTGTAAAAATTGTCTTCTCAATACCAGTTATTCCGCTTTATCAATTCTAAAAGTCTTTAATCACCAGATTTGACTATTTCCATCTCTCATTTGAAAAAATAGTTTATCGATTTGTGGTTAGACAAGTTACTTGCTGATCTTTTGGCACAACTTGTGTAAGTTATCCACCAATCTGGTGTTGCTTCTTAACTCTTAACATATCGACCTTGGTAAATCACTAATTCTCTATCTTGTCCCTCACTACCAAGACTTAGGAGCTTGAGGCTTTGGTTCACAACGTATTTACTAATAAGTTGTAATAAATAGTCAAAAGAATATTCAAATAGGTCCTGTGAGTTAAATACATAGCATAACTTACAAGTTCAGTCTACTCTCATTTTGATGGTATATCAGCACTTATTCCTTCCTCTTATTTATTAAGTGAACGAAAAAAGTTCACACTCTAATAGCATCATAGCATGTATTGTCTGCTTGCCTTCACATGTCTTTTTGGTTTCAAGTGTTTGTACCTAAGAAACCAGCAAGTCATTTGTTTCTTGGAATTGAGTAGTGATATCTGCAGAATGGTTTGATACTACATTCTACATGTTGTATTTCATTTCTTTGAAATAGGATCGATATAGTTCTTAATCTGAAGACTATCTCTAAAGTATGCTTATATTGCTTTAGTTTACTGTTTCTCATTTTTGTAGTATCTGCCTGAGAATTTCTTGAAAAACTGATCGCGAGCTAGTAAAAAAAAATGTTCAGTCGTTCCACAACATTCTCTCTCCTTCCTCGTTGTGCTATCACACAGAACTCTGAATTTTGCAGTCTACTTCCTTTGAGCTTTTCAACTCTCTGGGGCGGTGAAGTTCATCCATTTCTCCAAGAGAAGAGAAAAGATAGGGAAGCAACATCATATGAAGTCATGTGAACACAACTTTTGTCCCTGTAGGGAGGACAATTGTATTTTTCCCTCAGAAATGAACTTTAATATAGAAATATGTCATGGGCATTTCGAATCAGAAAGGAACTTCAATATAGAAATATGTCATGGGCATTTCAAATATAA</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTGAGTGAACCTCTTTATCTCTTATTCACAATTGATTGCCATATTCCACCATGAAAATATACAGTGCAAAAAACATCAACAAAAATGGTGGCATTAGCTTCTTCATCTCTCTGCAATTCCCCTTCTTCAATTATCCATTCCTCAAAAACATCTATACCCAATTTCATTACATTCTCTTCCTTAAGTTATTACAAGAAAAGGGGAAAATCGCTTGCAAGTCGTAGCCTTGGAATTGTTGCTGCTACTGAAGGTTCTGTTAACAAATCTAGTGGAAAAGATGAGGAAAAACAAGAAGACCCATCAGTTCCTACATGGGCTAAACCCGGTACGGATGAGCCTCCACCATGGGCTAGAAATGAAGCACAGAAAGATTCTTCAAGCATTCAAGTTCCATTCGTTGTTTATTTGCTTGCTTCTGCTGTCACAGCAATTGCAGCG...................................................................................................ATTGGTTCTATTTTCGAGTACACGAATCAGAAACCTGTGTTTGGAGTTTTGGGTTCAGATAGTGTTTTTTATGCTCCATTGCTTGGGTTCTTTGTGTTCACTGGCATTCCCACTTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTCCTTTGGTTCAAATCAGTACAAGTTGCTAACAAGGAGGCTGAGGAACAAGACCGCAGGGATGGATATATGTAACATCTAATATGCAATCTTTAGGTGATATCTGCAGCATCTTATATGCATTTTTCAGATGTTGTTGATGGTTGTTTCCTAAAATACTATCATCGCAAATGAATACTTTCTCGAGGTTTGTTCTTTCTAGAGCAGCATGAGTGTAAAAATTGTCTTCTCAATACCAGTTATTCCGCTTTATCAATTCTAAAAGTCTTTAATCACCAGATTTGACTATTTCCATCTCTCATTTGAAAAAATAGTTTATCGATTTGTGGTTAGACAAGTTACTTGCTGATCTTTTGGCACAACTTGTGTAAGTTATCCACCAATCTGGTGTTGCTTCTTAACTCTTAACATATCGACCTTGGTAAATCACTAATTCTCTATCTTGTCCCTCACTACCAAGACTTAGGAGCTTGAGGCTTTGGTTCACAACGTATTTACTAATAAGTTGTAATAAATAGTCAAAAGAATATTCAAATAGGTCCTGTGAGTTAAATACATAGCATAACTTACAAGTTCAGTCTACTCTCATTTTGATGGTATATCAGCACTTATTCCTTCCTCTTATTTATTAAGTGAACGAAAAAAGTTCACACTCTAATAGCATCATAGCATGTATTGTCTGCTTGCCTTCACATGTCTTTTTGGTTTCAAGTGTTTGTACCTAAGAAACCAGCAAGTCATTTGTTTCTTGGAATTGAGTAGTGATATCTGCAGAATGGTTTGATACTACATTCTACATGTTGTATTTCATTTCTTTGAAATAGGATCGATATAGTTCTTAATCTGAAGACTATCTCTAAAGTATGCTTATATTGCTTTAGTTTACTGTTTCTCATTTTTGTAGTATCTGCCTGAGAATTTCTTGAAAAACTGATCGCGAGCTAGTAAAAAAAAATGTTCAGTCGTTCCACAACATTCTCTCTCCTTCCTCGTTGTGCTATCACACAGAACTCTGAATTTTGCAGTCTACTTCCTTTGAGCTTTTCAACTCTCTGGGGCGGTGAAGTTCATCCATTTCTCCAAGAGAAGAGAAAAGATAGGGAAGCAACATCATATGAAGTCATGTGAACACAACTTTTGTCCCTGTAGGGAGGACAATTGTATTTTTCCCTCAGAAATGAACTTTAATATAGAAATATGTCATGGGCATTTCGAATCAGAAAGGAACTTCAATATAGAAATATGTCATGGGCATTTCAAATATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E737990" ref_strand="+" ref_description="SGN-E737990 [LC11DG07]">
      <seq>aattatccattcctcaaaaacatctatacccaatttcattacattctcttccttaagtttttacaagaaaaggggaaaatcgcttgcaagtcgtagccttggaattgttgctgctactgaaggttctgttaacaaatctagtggaaaagatgaggaaaaacaagaagacccatcagttcctacatgggctaaacccggtacggatgagcctccaccatgggctagaaatgaagcacagaaagattcttcaagcattcaagttccattcgttgtttatttgcttgcttctgctgtcacagcaattgcagcgattggttctattttcgagtacacgaatcagaaacctgtgtttggagttttgggttcagatagtgttttttatgctccattgcttgggttctttgtgttcactggcattcccacttctgcattcctttggttcaaatcagtacaagttgctaacaaggaggctgaggaacaagaccgcagggatggatatatgtaacatctaatatgcaatctttaggtgatatctgcagcatcttatatgcatttttcagatgttgttgatggttgtttcctaaaatactatcatcgcaaatgaatactttctcgaggtttgttctttctatagcagcatgagtgtaaaaattgtcttctcaataccagttattccgctttatcaattcaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="103525" stop="101198"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103225" g_stop="102916" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="310" r_length="310" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102915" i_stop="102817" i_length="99">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102816" g_stop="102700" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="427" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102699" i_stop="101765" i_length="935">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.695" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101764" g_stop="101499" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="428" r_stop="693" r_length="266" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E737990" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E737990" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103225" e_stop="102916"/>
          <exon e_start="102816" e_stop="102700"/>
          <exon e_start="101764" e_stop="101499"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTATCCATTCCTCAAAAACATCTATACCCAATTTCATTACATTCTCTTCCTTAAGTTATTACAAGAAAAGGGGAAAATCGCTTGCAAGTCGTAGCCTTGGAATTGTTGCTGCTACTGAAGGTTCTGTTAACAAATCTAGTGGAAAAGATGAGGAAAAACAAGAAGACCCATCAGTTCCTACATGGGCTAAACCCGGTACGGATGAGCCTCCACCATGGGCTAGAAATGAAGCACAGAAAGATTCTTCAAGCATTCAAGTTCCATTCGTTGTTTATTTGCTTGCTTCTGCTGTCACAGCAATTGCAGCGGTGAGTTTTTTTCTTTTAAATCAGGAATTTCATTTTCTAGTGGAGAAGTTTTTTGGGGTCATTATAAAGATTGATTCTTGATTGGGTTTTTGAGTGCAGATTGGTTCTATTTTCGAGTACACGAATCAGAAACCTGTGTTTGGAGTTTTGGGTTCAGATAGTGTTTTTTATGCTCCATTGCTTGGGTTCTTTGTGTTCACTGGCATTCCCACTTCTGTAAGTTGATTTATTTTTTTCTCTGTTCATGTCTTTCTGCTGTTTACGTTATGTTGAATTGTTTTGAATGATGAAACTAAGTTAGCGTTTGACCATAAATTTTGGACTAAATTTTGGTAATTTATATTTTGAATATCCGTTTGGCCGTGAAATTTGATTAGTTTTTGAAAATATGATCCTCAAAATACTTTTCAAGTTCCCAAAAGGGGCTTTTTTAGTTTTTGGGACTTCCACTCACGAGACATCAAATGTATGGCCAAATACAACTTTAAGTTCTAAAACTAACAACTTCAAAGAGTTTCTACCTCCGTCTTCAAATCTATGGCCAAACGGGAGCTTAAGACTATACAAATTTGGTCTTTTTGCAAGTTCTGTTTTCAACCCACTTGTAGGTGATTTACTGCCTGTATTTCCATATTTTAAGATAATGGTAGCTACTTCTGTTATTTAAATTATAAGGTAACAATTTCATTAATTGGAAAGAGGAACCAATGAAGAAGTTCCTTAATAGATCTTTGTTTTGTTAGTTACATTTCGGTTCAAAAATATTCCCTTGTTTCAATTTGTTTGTTCTAATTTCCATTTTAGTCCGTTTAAGAAAGAACAGGTTTTTCCTTTTCTAGAAATTCGGTAATTCTAACTTTCTATATGATATGTTTAAGACTACAAAATTCAAAAGATATTTTTACTTTCTTGAATTCCGTGCCAAGTTAATACTAGACAAACAAATTGGCTAAATATGCCAGTCTTGCCTGCATGGTGAGTACTGTATGGCTGGCATAATTTGTGGAACCTAACAGGGTTGGCTCCTCGGCCGACCCTCCATTTAAAAATAATAATAATAATAAAATCAGGGGAGTACTACTTTTGGCAAAAAGAAAAAGGAAAAGTTGATGTTTCTATATTCATTTGAGCTGATTAGAACATATATCCAGGCATTCCTTTGGTTCAAATCAGTACAAGTTGCTAACAAGGAGGCTGAGGAACAAGACCGCAGGGATGGATATATGTAACATCTAATATGCAATCTTTAGGTGATATCTGCAGCATCTTATATGCATTTTTCAGATGTTGTTGATGGTTGTTTCCTAAAATACTATCATCGCAAATGAATACTTTCTCGAGGTTTGTTCTTTCTAGAGCAGCATGAGTGTAAAAATTGTCTTCTCAATACCAGTTATTCCGCTTTATCAATTCTAAA</genome_strand>
        <mrna_strand>AATTATCCATTCCTCAAAAACATCTATACCCAATTTCATTACATTCTCTTCCTTAAGTTTTTACAAGAAAAGGGGAAAATCGCTTGCAAGTCGTAGCCTTGGAATTGTTGCTGCTACTGAAGGTTCTGTTAACAAATCTAGTGGAAAAGATGAGGAAAAACAAGAAGACCCATCAGTTCCTACATGGGCTAAACCCGGTACGGATGAGCCTCCACCATGGGCTAGAAATGAAGCACAGAAAGATTCTTCAAGCATTCAAGTTCCATTCGTTGTTTATTTGCTTGCTTCTGCTGTCACAGCAATTGCAGCG...................................................................................................ATTGGTTCTATTTTCGAGTACACGAATCAGAAACCTGTGTTTGGAGTTTTGGGTTCAGATAGTGTTTTTTATGCTCCATTGCTTGGGTTCTTTGTGTTCACTGGCATTCCCACTTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTCCTTTGGTTCAAATCAGTACAAGTTGCTAACAAGGAGGCTGAGGAACAAGACCGCAGGGATGGATATATGTAACATCTAATATGCAATCTTTAGGTGATATCTGCAGCATCTTATATGCATTTTTCAGATGTTGTTGATGGTTGTTTCCTAAAATACTATCATCGCAAATGAATACTTTCTCGAGGTTTGTTCTTTCTATAGCAGCATGAGTGTAAAAATTGTCTTCTCAATACCAGTTATTCCGCTTTATCAATTCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E319659" ref_strand="+" ref_description="SGN-E319659 [cTOB-12-D19]">
      <seq>tagcttcttcatctctctgcaattccccttcttcaattatccattcctcaaaaacatctatacccaatttcattacattctcttccttaagttattacaagaaaaggggaaaatcgcttgcaagtcgtagccttggaattgttgctgctactgaaggttctgttaacaaatctagtggaaaagatgaggaaaaacaagaagacccatcagttcctacatgggctaaacccggtacggatgagcctccaccatgggctagaaatgaagcacagaaagattcttcaagcattcaagttccattcggtgtttatttgcttgcttctgctgtcacagcaattgcagcgattgggtctattttcgagtacacgaatcagaaacctgtgtttggagttttgggttcagatagtgttttttatgctccattgcttgggttctttgtgttcactggcattcccacttctgcattcctttggttcaaatcagtacaagttgctaacaaggaggctgaggaacaagaccgcagggatggatatatgtaacatctaatatgcaatctttaggtgatatctgcagcatcttatatgcatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="103559" stop="101336"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103259" g_stop="102916" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="344" r_length="344" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102915" i_stop="102817" i_length="99">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.954" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102816" g_stop="102700" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="461" r_length="117" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102699" i_stop="101765" i_length="935">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.695" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101764" g_stop="101636" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="590" r_length="129" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E319659" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>590</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E319659" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103259" e_stop="102916"/>
          <exon e_start="102816" e_stop="102700"/>
          <exon e_start="101764" e_stop="101636"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCTTCTTCATCTCTCTGCAATTCCCCTTCTTCAATTATCCATTCCTCAAAAACATCTATACCCAATTTCATTACATTCTCTTCCTTAAGTTATTACAAGAAAAGGGGAAAATCGCTTGCAAGTCGTAGCCTTGGAATTGTTGCTGCTACTGAAGGTTCTGTTAACAAATCTAGTGGAAAAGATGAGGAAAAACAAGAAGACCCATCAGTTCCTACATGGGCTAAACCCGGTACGGATGAGCCTCCACCATGGGCTAGAAATGAAGCACAGAAAGATTCTTCAAGCATTCAAGTTCCATTCGTTGTTTATTTGCTTGCTTCTGCTGTCACAGCAATTGCAGCGGTGAGTTTTTTTCTTTTAAATCAGGAATTTCATTTTCTAGTGGAGAAGTTTTTTGGGGTCATTATAAAGATTGATTCTTGATTGGGTTTTTGAGTGCAGATTGGTTCTATTTTCGAGTACACGAATCAGAAACCTGTGTTTGGAGTTTTGGGTTCAGATAGTGTTTTTTATGCTCCATTGCTTGGGTTCTTTGTGTTCACTGGCATTCCCACTTCTGTAAGTTGATTTATTTTTTTCTCTGTTCATGTCTTTCTGCTGTTTACGTTATGTTGAATTGTTTTGAATGATGAAACTAAGTTAGCGTTTGACCATAAATTTTGGACTAAATTTTGGTAATTTATATTTTGAATATCCGTTTGGCCGTGAAATTTGATTAGTTTTTGAAAATATGATCCTCAAAATACTTTTCAAGTTCCCAAAAGGGGCTTTTTTAGTTTTTGGGACTTCCACTCACGAGACATCAAATGTATGGCCAAATACAACTTTAAGTTCTAAAACTAACAACTTCAAAGAGTTTCTACCTCCGTCTTCAAATCTATGGCCAAACGGGAGCTTAAGACTATACAAATTTGGTCTTTTTGCAAGTTCTGTTTTCAACCCACTTGTAGGTGATTTACTGCCTGTATTTCCATATTTTAAGATAATGGTAGCTACTTCTGTTATTTAAATTATAAGGTAACAATTTCATTAATTGGAAAGAGGAACCAATGAAGAAGTTCCTTAATAGATCTTTGTTTTGTTAGTTACATTTCGGTTCAAAAATATTCCCTTGTTTCAATTTGTTTGTTCTAATTTCCATTTTAGTCCGTTTAAGAAAGAACAGGTTTTTCCTTTTCTAGAAATTCGGTAATTCTAACTTTCTATATGATATGTTTAAGACTACAAAATTCAAAAGATATTTTTACTTTCTTGAATTCCGTGCCAAGTTAATACTAGACAAACAAATTGGCTAAATATGCCAGTCTTGCCTGCATGGTGAGTACTGTATGGCTGGCATAATTTGTGGAACCTAACAGGGTTGGCTCCTCGGCCGACCCTCCATTTAAAAATAATAATAATAATAAAATCAGGGGAGTACTACTTTTGGCAAAAAGAAAAAGGAAAAGTTGATGTTTCTATATTCATTTGAGCTGATTAGAACATATATCCAGGCATTCCTTTGGTTCAAATCAGTACAAGTTGCTAACAAGGAGGCTGAGGAACAAGACCGCAGGGATGGATATATGTAACATCTAATATGCAATCTTTAGGTGATATCTGCAGCATCTTATATGCATTTT</genome_strand>
        <mrna_strand>TAGCTTCTTCATCTCTCTGCAATTCCCCTTCTTCAATTATCCATTCCTCAAAAACATCTATACCCAATTTCATTACATTCTCTTCCTTAAGTTATTACAAGAAAAGGGGAAAATCGCTTGCAAGTCGTAGCCTTGGAATTGTTGCTGCTACTGAAGGTTCTGTTAACAAATCTAGTGGAAAAGATGAGGAAAAACAAGAAGACCCATCAGTTCCTACATGGGCTAAACCCGGTACGGATGAGCCTCCACCATGGGCTAGAAATGAAGCACAGAAAGATTCTTCAAGCATTCAAGTTCCATTCGGTGTTTATTTGCTTGCTTCTGCTGTCACAGCAATTGCAGCG...................................................................................................ATTGGGTCTATTTTCGAGTACACGAATCAGAAACCTGTGTTTGGAGTTTTGGGTTCAGATAGTGTTTTTTATGCTCCATTGCTTGGGTTCTTTGTGTTCACTGGCATTCCCACTTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTCCTTTGGTTCAAATCAGTACAAGTTGCTAACAAGGAGGCTGAGGAACAAGACCGCAGGGATGGATATATGTAACATCTAATATGCAATCTTTAGGTGATATCTGCAGCATCTTATATGCATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E296346" ref_strand="+" ref_description="SGN-E296346 [cLET-19-H16]">
      <seq>gaaaatcgcttgcaagtcgtagccttggaattgttgctgctactgaaggttctgttaacaaatctagtggaaaagatgaggaaaaacaagaagacccatcagttcctacatgggctaaacccggtacggatgagcctccaccatgggctagaaatgaagcacagaaagattcttcaagcattcaagttccattcgttgtttatttgcttgcttctgctgtcacagcaattgcagcgattggttctattttcgagtacacgaatcagaaacctgtgtttggagttttgggttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="103451" stop="102460"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103151" g_stop="102916" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="236" r_length="236" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102915" i_stop="102817" i_length="99">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102816" g_stop="102760" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="293" r_length="57" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E296346" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>293</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E296346" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103151" e_stop="102916"/>
          <exon e_start="102816" e_stop="102760"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAATCGCTTGCAAGTCGTAGCCTTGGAATTGTTGCTGCTACTGAAGGTTCTGTTAACAAATCTAGTGGAAAAGATGAGGAAAAACAAGAAGACCCATCAGTTCCTACATGGGCTAAACCCGGTACGGATGAGCCTCCACCATGGGCTAGAAATGAAGCACAGAAAGATTCTTCAAGCATTCAAGTTCCATTCGTTGTTTATTTGCTTGCTTCTGCTGTCACAGCAATTGCAGCGGTGAGTTTTTTTCTTTTAAATCAGGAATTTCATTTTCTAGTGGAGAAGTTTTTTGGGGTCATTATAAAGATTGATTCTTGATTGGGTTTTTGAGTGCAGATTGGTTCTATTTTCGAGTACACGAATCAGAAACCTGTGTTTGGAGTTTTGGGTTCA</genome_strand>
        <mrna_strand>GAAAATCGCTTGCAAGTCGTAGCCTTGGAATTGTTGCTGCTACTGAAGGTTCTGTTAACAAATCTAGTGGAAAAGATGAGGAAAAACAAGAAGACCCATCAGTTCCTACATGGGCTAAACCCGGTACGGATGAGCCTCCACCATGGGCTAGAAATGAAGCACAGAAAGATTCTTCAAGCATTCAAGTTCCATTCGTTGTTTATTTGCTTGCTTCTGCTGTCACAGCAATTGCAGCG...................................................................................................ATTGGTTCTATTTTCGAGTACACGAATCAGAAACCTGTGTTTGGAGTTTTGGGTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E325469" ref_strand="+" ref_description="SGN-E325469 [cTOC-1-F4]">
      <seq>ccccgggctgcagaaaacataacaaaaatggggcattagcttcttcatcttctgcaattccccttcttcaattatcattctaaaaacatctatcccaatttcattacattctcttcttaagttattacaagaaaggggaaaatcgcttgcaagtcgtaccttggaattgtgctgctactgaaggttctgttaacaaatctagtggaaaagatgaggaaaaacaagaagacccatcagttcctacatgggctaaacccggtacggatgagcctccaccatgggctagaaatgaagcacagaaagattcttcaagcattcaagttccattcgttgtttatttgcttgcttctgctgtcacagcaattgcagcgattggttctattttcgagtacacgaatcagaaacctgtgtttggagttttgggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="103589" stop="102463"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103289" g_stop="102916" g_length="374"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="371" r_length="363" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102915" i_stop="102817" i_length="99">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102816" g_stop="102763" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="425" r_length="54" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E325469" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>428</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E325469" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103289" e_stop="102916"/>
          <exon e_start="102816" e_stop="102763"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAAAAAACATCAACAAAAATGGTGGCATTAGCTTCTTCATCTCTCTGCAATTCCCCTTCTTCAATTATCCATTCCTCAAAAACATCTATACCCAATTTCATTACATTCTCTTCCTTAAGTTATTACAAGAAAAGGGGAAAATCGCTTGCAAGTCGTAGCCTTGGAATTGTTGCTGCTACTGAAGGTTCTGTTAACAAATCTAGTGGAAAAGATGAGGAAAAACAAGAAGACCCATCAGTTCCTACATGGGCTAAACCCGGTACGGATGAGCCTCCACCATGGGCTAGAAATGAAGCACAGAAAGATTCTTCAAGCATTCAAGTTCCATTCGTTGTTTATTTGCTTGCTTCTGCTGTCACAGCAATTGCAGCGGTGAGTTTTTTTCTTTTAAATCAGGAATTTCATTTTCTAGTGGAGAAGTTTTTTGGGGTCATTATAAAGATTGATTCTTGATTGGGTTTTTGAGTGCAGATTGGTTCTATTTTCGAGTACACGAATCAGAAACCTGTGTTTGGAGTTTTGGGT</genome_strand>
        <mrna_strand>TGCAGAAAACAT-AACAAAAATGG-GGCATTAGCTTCTTCATCT-TCTGCAATTCCCCTTCTTCAATTAT-CATT-CT-AAAAACATCTAT-CCCAATTTCATTACATTCTCTT-CTTAAGTTATTACAAG-AAAGGGGAAAATCGCTTGCAAGTCGTA-CCTTGGAATTG-TGCTGCTACTGAAGGTTCTGTTAACAAATCTAGTGGAAAAGATGAGGAAAAACAAGAAGACCCATCAGTTCCTACATGGGCTAAACCCGGTACGGATGAGCCTCCACCATGGGCTAGAAATGAAGCACAGAAAGATTCTTCAAGCATTCAAGTTCCATTCGTTGTTTATTTGCTTGCTTCTGCTGTCACAGCAATTGCAGCG...................................................................................................ATTGGTTCTATTTTCGAGTACACGAATCAGAAACCTGTGTTTGGAGTTTTGGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E248025" ref_strand="+" ref_description="SGN-E248025 [cLEF-47-I8]">
      <seq>ttccattttcttttgtctaagcaatcgcgaaaaaaattatttaagagatcgaatatgattatatgaaatatctcttaattttatccgacgcagtacgttaatggaaatatattttgtctactactattacacagtatacctgtgactgaataatctctttctctttctctctccctctcctctttattttcaaatcattctctctctctgtgtgtcttgttctgctataaaaaacctcatcttttttttttttcatcttgtagttgataatacattcttttactagccttatacatcaagataggagatgggtgtttcaaaaaagactctttttttactatttgttagtgtttttcttggagaaattagtctctgctcttctaccaagttatatgtggtgtacatgggaagcaaagatagtgatgagcatcaagatgagattttgaggcaaaaccatcaaatgcttactgatattcatggaggaaatgttgaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="113500" stop="114676"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113800" g_stop="114186" g_length="387"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="388" r_length="388" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="114187" i_stop="114276" i_length="90">
            <donor d_prob="0.267" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="114277" g_stop="114374" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="486" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="114375" i_stop="114470" i_length="96">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="114471" g_stop="114478" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="487" r_stop="494" r_length="8" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E248025" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>493</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E248025" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113800" e_stop="114186"/>
          <exon e_start="114277" e_stop="114374"/>
          <exon e_start="114471" e_stop="114478"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATTTTCTTTTGTCTAAGCAATCGCGAAAAAAATTATTTAAGAGATCGAATATGATTATATGAAATATCTCTTAATTTTATCCGACGCAGTACGTTAATGGAAATATATTTTGTCTACTACTATTACACAGTATACCTGTGACTGAATAATCTCTTTCTCTTTCTCTCTCCCTCTCCTCTTTATTTTCAAATCATTCTCTCTCTCTGTGTGTCTTGTTCTGCTATAAAAAACCTCATC-TTTTTTTTTTTCATCTTGTAGTTGATAATACATTCTTTTACTAGCCTTATACATCAAGATAGGAGATGGGTGTTTCAAAAAAGACTCTTTTTTTACTATTTGTTAGTGTTTTTCTTGGAGAAATTAGTCTCTGCTCTTCTACCAAGGTAAATTTGGCTCTGTGTGAACTATGGGGACATATGGGGTTTTCTTTGAATGATGAATAGTTAGTAAAGTTGTGTTTTTTCTGTGTTTAGTTATATGTGGTGTACATGGGAAGCAAAGATAGTGATGAGCATCAAGATGAGATTTTGAGGCAAAACCATCAAATGCTTACTGATATTCATGGAGGAAAGTAAGTTGTTGGTACTTTTAGCTATGAGTTTGTTTTCCCCCTTTTTGTCTGTTTTTGGCAAAAATAAAAAACTGAAGTGGTTAATAATCTTTACAGTGTTGAAC</genome_strand>
        <mrna_strand>TTCCATTTTCTTTTGTCTAAGCAATCGCGAAAAAAATTATTTAAGAGATCGAATATGATTATATGAAATATCTCTTAATTTTATCCGACGCAGTACGTTAATGGAAATATATTTTGTCTACTACTATTACACAGTATACCTGTGACTGAATAATCTCTTTCTCTTTCTCTCTCCCTCTCCTCTTTATTTTCAAATCATTCTCTCTCTCTGTGTGTCTTGTTCTGCTATAAAAAACCTCATCTTTTTTTTTTTTCATCTTGTAGTTGATAATACATTCTTTTACTAGCCTTATACATCAAGATAGGAGATGGGTGTTTCAAAAAAGACTCTTTTTTTACTATTTGTTAGTGTTTTTCTTGGAGAAATTAGTCTCTGCTCTTCTACCAAG..........................................................................................TTATATGTGGTGTACATGGGAAGCAAAGATAGTGATGAGCATCAAGATGAGATTTTGAGGCAAAACCATCAAATGCTTACTGATATTCATGGAGGAAA................................................................................................TGTTGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E248028" ref_strand="+" ref_description="SGN-E248028 [cLEF-47-I24]">
      <seq>cattttcttttgtctaaacaatcgggaaaaaaggggtttatgagatcgaatatgattatatgaaatatctcttaattttatccgacgcagtacgtcaatggaaatatattatgtctactactattacacagtatacctgtgactgaataatctctttctctttctctctccctctcctctttattttcaaatgattctctctctctgcgtgtcttgttctgctataaaaaacctcatctttttttgttttcatctatgagatgataatacattcttttactaaccttatacatcaagataggagatgggtgtttcacaaaagactctttttttactattggtgggtgtggttcttggagaaattagtctctgctcttctaccaagttatatgtggcgtacatgggaagcaaagatcgcgatgagcatcaagatgagagatcgaggcaaaaccatcaaatgcttactgatattcatggaggaaatgttgaacaagccaagagttctcatgtata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="113503" stop="114800"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113803" g_stop="114186" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="385" r_length="385" r_score="0.938"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="114187" i_stop="114276" i_length="90">
            <donor d_prob="0.267" d_score="0.90"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="114277" g_stop="114374" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="483" r_length="98" r_score="0.939"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="114375" i_stop="114470" i_length="96">
            <donor d_prob="0.989" d_score="0.94"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="114471" g_stop="114500" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="513" r_length="30" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E248028" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E248028" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113803" e_stop="114186"/>
          <exon e_start="114277" e_stop="114374"/>
          <exon e_start="114471" e_stop="114500"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTTCTTTTGTCTAAGCAATCGCGAAAAAAATTATTTAAGAGATCGAATATGATTATATGAAATATCTCTTAATTTTATCCGACGCAGTACGTTAATGGAAATATATTTTGTCTACTACTATTACACAGTATACCTGTGACTGAATAATCTCTTTCTCTTTCTCTCTCCCTCTCCTCTTTATTTTCAAATCATTCTCTCTCTCTGTGTGTCTTGTTCTGCTATAAAAAACCTCATCTTTTTTT-TTTTCATCTTGTAGTTGATAATACATTCTTTTACTAGCCTTATACATCAAGATAGGAGATGGGTGTTTCAAAAAAGACTCTTTTTTTACTATTTGTTAGTGTTTTTCTTGGAGAAATTAGTCTCTGCTCTTCTACCAAGGTAAATTTGGCTCTGTGTGAACTATGGGGACATATGGGGTTTTCTTTGAATGATGAATAGTTAGTAAAGTTGTGTTTTTTCTGTGTTTAGTTATATGTGGTGTACATGGGAAGCAAAGATAGTGATGAGCATCAAGATGAGATTTTGAGGCAAAACCATCAAATGCTTACTGATATTCATGGAGGAAAGTAAGTTGTTGGTACTTTTAGCTATGAGTTTGTTTTCCCCCTTTTTGTCTGTTTTTGGCAAAAATAAAAAACTGAAGTGGTTAATAATCTTTACAGTGTTGAACAAGCCAAGAGTTCTCATGTATA</genome_strand>
        <mrna_strand>CATTTTCTTTTGTCTAAACAATCGGGAAAAAAGGGGTTTATGAGATCGAATATGATTATATGAAATATCTCTTAATTTTATCCGACGCAGTACGTCAATGGAAATATATTATGTCTACTACTATTACACAGTATACCTGTGACTGAATAATCTCTTTCTCTTTCTCTCTCCCTCTCCTCTTTATTTTCAAATGATTCTCTCTCTCTGCGTGTCTTGTTCTGCTATAAAAAACCTCATCTTTTTTTGTTTTCATCTATGAGATGATAATACATTCTTTTACTAACCTTATACATCAAGATAGGAGATGGGTGTTTCACAAAAGACTCTTTTTTTACTATTGGTGGGTGTGGTTCTTGGAGAAATTAGTCTCTGCTCTTCTACCAAG..........................................................................................TTATATGTGGCGTACATGGGAAGCAAAGATCGCGATGAGCATCAAGATGAGAGATCGAGGCAAAACCATCAAATGCTTACTGATATTCATGGAGGAAA................................................................................................TGTTGAACAAGCCAAGAGTTCTCATGTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E329136" ref_strand="+" ref_description="SGN-E329136 [cTOD-2-G11]">
      <seq>ttttcaaatcattctctctctctgtgtgtcttgttctgctataaaaaacctcatctttttttttttcatcttgtagttgataatacattcttttactagccttatacatcaagataggagatgggtgtttcaaaaaagactctttttttactatttgttagtgtttttcttggagaaattagtctctgctcttctaccaagttatatgtggtgtacatggnaancaaagatagtgatgagcatcaagatgagattttgaggcaaaaccatcaaatgcttactgatattcatggaggaaatgttgaacaagccaagagttctcatgtatacagttatagacatggttttaaaggctttncagccaagttgactgagaaacaggcttctgaaatatctaaaatgcctggtgtggtatctgtatttccaaatactaagagaaacctgcatacaactcattcatgggattttatggggctcagtgaagatgaaacaatggaaatcccaggtttttccaccaagaaccaagttaatgtaatcattggtttcattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="113686" stop="115113"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113986" g_stop="114186" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="201" r_length="201" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="114187" i_stop="114276" i_length="90">
            <donor d_prob="0.267" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="114277" g_stop="114374" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="299" r_length="98" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="114375" i_stop="114470" i_length="96">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="114471" g_stop="114568" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="397" r_length="98" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="114569" i_stop="114659" i_length="91">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="114660" g_stop="114813" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="398" r_stop="551" r_length="154" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E329136" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E329136" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113986" e_stop="114186"/>
          <exon e_start="114277" e_stop="114374"/>
          <exon e_start="114471" e_stop="114568"/>
          <exon e_start="114660" e_stop="114813"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCAAATCATTCTCTCTCTCTGTGTGTCTTGTTCTGCTATAAAAAACCTCATCTTTTTTTTTTTCATCTTGTAGTTGATAATACATTCTTTTACTAGCCTTATACATCAAGATAGGAGATGGGTGTTTCAAAAAAGACTCTTTTTTTACTATTTGTTAGTGTTTTTCTTGGAGAAATTAGTCTCTGCTCTTCTACCAAGGTAAATTTGGCTCTGTGTGAACTATGGGGACATATGGGGTTTTCTTTGAATGATGAATAGTTAGTAAAGTTGTGTTTTTTCTGTGTTTAGTTATATGTGGTGTACATGGGAAGCAAAGATAGTGATGAGCATCAAGATGAGATTTTGAGGCAAAACCATCAAATGCTTACTGATATTCATGGAGGAAAGTAAGTTGTTGGTACTTTTAGCTATGAGTTTGTTTTCCCCCTTTTTGTCTGTTTTTGGCAAAAATAAAAAACTGAAGTGGTTAATAATCTTTACAGTGTTGAACAAGCCAAGAGTTCTCATGTATACAGTTATAGACATGGTTTTAAAGGCTTTGCAGCCAAGTTGACTGAGAAACAGGCTTCTGAAATATCTAGTGAGTCTTTTACCTAATGTTTTATGTTACTGTTGATTACCTAATTTGATGGTTTGTACTCAGTCCACTGTTTGATGTTGAAACAAAACAGAAATGCCTGGTGTGGTATCTGTATTTCCAAATACTAAGAGAAACCTGCATACAACTCATTCATGGGATTTTATGGGGCTCAGTGAAGATGAAACAATGGAAATCCCAGGTTTTTCCACCAAGAACCAAGTTAATGTAATCATTGGTTTCATTGA</genome_strand>
        <mrna_strand>TTTTCAAATCATTCTCTCTCTCTGTGTGTCTTGTTCTGCTATAAAAAACCTCATCTTTTTTTTTTTCATCTTGTAGTTGATAATACATTCTTTTACTAGCCTTATACATCAAGATAGGAGATGGGTGTTTCAAAAAAGACTCTTTTTTTACTATTTGTTAGTGTTTTTCTTGGAGAAATTAGTCTCTGCTCTTCTACCAAG..........................................................................................TTATATGTGGTGTACATGGNAANCAAAGATAGTGATGAGCATCAAGATGAGATTTTGAGGCAAAACCATCAAATGCTTACTGATATTCATGGAGGAAA................................................................................................TGTTGAACAAGCCAAGAGTTCTCATGTATACAGTTATAGACATGGTTTTAAAGGCTTTNCAGCCAAGTTGACTGAGAAACAGGCTTCTGAAATATCTA...........................................................................................AAATGCCTGGTGTGGTATCTGTATTTCCAAATACTAAGAGAAACCTGCATACAACTCATTCATGGGATTTTATGGGGCTCAGTGAAGATGAAACAATGGAAATCCCAGGTTTTTCCACCAAGAACCAAGTTAATGTAATCATTGGTTTCATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E335477" ref_strand="+" ref_description="SGN-E335477 [cTOE-2-I11]">
      <seq>gaatttggcctgagtctccaagttttagggacacccacatgcctccagtgcctgctggatggaaaggacaatgccaatcaggggaagcattcaatgcctcaatatgcaacaggaaaataattggggcaagatattatatgagtggctatgcagctgaagaagatgaaaagatcatgttcaagtctgccagggacagttctggtcatggaagtcatacagcttcaactgctgctgggcgttatgtagctgatatgaattacaaaggtttggcatctggaggagccagaggtggtgccccaatggccaggatagcagtgtacaaaacctgctggagttctggttgctatgatgttgatttgttggctgcatttgatgatgcaattagagatggggttcatgtcatttctatatctttgggcccagatgctccccaaggagattattttagtgatgcaatttctgtggggtcatttcatgctgttagccgtgggatacttgtag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="115076" stop="116261"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115376" g_stop="115487" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="115488" i_stop="115572" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="115573" g_stop="115961" g_length="389"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="501" r_length="389" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E335477" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E335477" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115376" e_stop="115487"/>
          <exon e_start="115573" e_stop="115961"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATTTGGCCTGAGTCTCCAAGTTTTAGGGACACCCACATGCCTCCAGTGCCTGCTGGATGGAAAGGACAATGCCAATCAGGGGAAGCATTCAATGCCTCAATATGCAACAGGTTTCTTTTAATTATCAACCATTTCTTGCAGTTTAATGTATTGTTTTATAGATGACAAGTCTAATAAGAATTTTGTCTTGTATAGGAAAATAATTGGGGCAAGATATTATATGAGTGGCTATGCAGCTGAAGAAGATGAAAAGATCATGTTCAAGTCTGCCAGGGACAGTTCTGGTCATGGAAGTCATACAGCTTCAACTGCTGCTGGGCGTTATGTAGCTGATATGAATTACAAAGGTTTGGCATCTGGAGGAGCCAGAGGTGGTGCCCCAATGGCCAGGATAGCAGTGTACAAAACCTGCTGGAGTTCTGGTTGCTATGATGTTGATTTGTTGGCTGCATTTGATGATGCAATTAGAGATGGGGTTCATGTCATTTCTATATCTTTGGGCCCAGATGCTCCCCAAGGAGATTATTTTAGTGATGCAATTTCTGTGGGGTCATTTCATGCTGTTAGCCGTGGGATACTTGTAG</genome_strand>
        <mrna_strand>GAATTTGGCCTGAGTCTCCAAGTTTTAGGGACACCCACATGCCTCCAGTGCCTGCTGGATGGAAAGGACAATGCCAATCAGGGGAAGCATTCAATGCCTCAATATGCAACAG.....................................................................................GAAAATAATTGGGGCAAGATATTATATGAGTGGCTATGCAGCTGAAGAAGATGAAAAGATCATGTTCAAGTCTGCCAGGGACAGTTCTGGTCATGGAAGTCATACAGCTTCAACTGCTGCTGGGCGTTATGTAGCTGATATGAATTACAAAGGTTTGGCATCTGGAGGAGCCAGAGGTGGTGCCCCAATGGCCAGGATAGCAGTGTACAAAACCTGCTGGAGTTCTGGTTGCTATGATGTTGATTTGTTGGCTGCATTTGATGATGCAATTAGAGATGGGGTTCATGTCATTTCTATATCTTTGGGCCCAGATGCTCCCCAAGGAGATTATTTTAGTGATGCAATTTCTGTGGGGTCATTTCATGCTGTTAGCCGTGGGATACTTGTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E337672" ref_strand="+" ref_description="SGN-E337672 [cTOE-17-H13]">
      <seq>acatgcctccagtgcctgctggatggaaaggacaatgccaatcaggggaagcattcaatgcctcaatatgcaacaggaaaataattggggcaagatattatatgagtggctatgcagctgaagaagatgaaaagatcatgttcaagtctgccagggacagttctggtcatggaagtcatacagcttcaactgctgctgggcgttatgtagctgatatgaattacaaaggtttggcatctggaggagccagaggtggtgccccaatggccaggatagcagtgtacaaaacctgctggagttctggttgctatgatgttgatttgttggctgcatttgatgatgcaattagagatggggttcatgtcatttctatatctttgggcccagatgctccccaaggagattattttagtgatgcaatttctgtggggtcatttcatgctgttagccgtgggatacttgtagtggcctccgttggaaatgaaggaacctctggttcagccacaaatttagctccttggatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="115112" stop="116322"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115412" g_stop="115487" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="115488" i_stop="115572" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="115573" g_stop="116022" g_length="450"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="526" r_length="450" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E337672" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E337672" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115412" e_stop="115487"/>
          <exon e_start="115573" e_stop="116022"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATGCCTCCAGTGCCTGCTGGATGGAAAGGACAATGCCAATCAGGGGAAGCATTCAATGCCTCAATATGCAACAGGTTTCTTTTAATTATCAACCATTTCTTGCAGTTTAATGTATTGTTTTATAGATGACAAGTCTAATAAGAATTTTGTCTTGTATAGGAAAATAATTGGGGCAAGATATTATATGAGTGGCTATGCAGCTGAAGAAGATGAAAAGATCATGTTCAAGTCTGCCAGGGACAGTTCTGGTCATGGAAGTCATACAGCTTCAACTGCTGCTGGGCGTTATGTAGCTGATATGAATTACAAAGGTTTGGCATCTGGAGGAGCCAGAGGTGGTGCCCCAATGGCCAGGATAGCAGTGTACAAAACCTGCTGGAGTTCTGGTTGCTATGATGTTGATTTGTTGGCTGCATTTGATGATGCAATTAGAGATGGGGTTCATGTCATTTCTATATCTTTGGGCCCAGATGCTCCCCAAGGAGATTATTTTAGTGATGCAATTTCTGTGGGGTCATTTCATGCTGTTAGCCGTGGGATACTTGTAGTGGCCTCCGTTGGAAATGAAGGAACCTCTGGTTCAGCCACAAATTTAGCTCCTTGGATGAT</genome_strand>
        <mrna_strand>ACATGCCTCCAGTGCCTGCTGGATGGAAAGGACAATGCCAATCAGGGGAAGCATTCAATGCCTCAATATGCAACAG.....................................................................................GAAAATAATTGGGGCAAGATATTATATGAGTGGCTATGCAGCTGAAGAAGATGAAAAGATCATGTTCAAGTCTGCCAGGGACAGTTCTGGTCATGGAAGTCATACAGCTTCAACTGCTGCTGGGCGTTATGTAGCTGATATGAATTACAAAGGTTTGGCATCTGGAGGAGCCAGAGGTGGTGCCCCAATGGCCAGGATAGCAGTGTACAAAACCTGCTGGAGTTCTGGTTGCTATGATGTTGATTTGTTGGCTGCATTTGATGATGCAATTAGAGATGGGGTTCATGTCATTTCTATATCTTTGGGCCCAGATGCTCCCCAAGGAGATTATTTTAGTGATGCAATTTCTGTGGGGTCATTTCATGCTGTTAGCCGTGGGATACTTGTAGTGGCCTCCGTTGGAAATGAAGGAACCTCTGGTTCAGCCACAAATTTAGCTCCTTGGATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E396406" ref_strand="+" ref_description="SGN-E396406 [TUS-35-N23]">
      <seq>ttcaagtctgccagggacagttctggtcatggaagtcatacagcttcaactgctgctgggcgttatgtagctgatatgaattacaaaggtttggcatctggaggagccagaggtggtgccccaatggccaggatagcagtgtacaaaacctgctggagttctggttgctatgatgttgatttgttggctgcatttgatgatgcaattagagatggggttcatgtcatttctatatctttgggcccagatgctccccaaggagattattttagtgatgcaatttctgtggggtcatttcatgctgttagccgtgggatacttgtagtggcctccgttggaaatgaaggaacctctggttcagccacaaatttagctccttggatgatcacagttgcagccagttcaaccgatagagattttacatctgatgttttactaggaaatagagttcaactcacgggtgaaagtcttagcttatctcaaatgcatacatctgcaaaaatcatacctgcttctgaagcttatgctggatacttcactccttatcaatccaggtgaagcaaaagttatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="115337" stop="116588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115637" g_stop="116095" g_length="459"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="459" r_length="459" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116096" i_stop="116175" i_length="80">
            <donor d_prob="0.904" d_score="1.00"/>
            <acceptor a_prob="0.766" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="116176" g_stop="116282" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="460" r_stop="566" r_length="107" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E396406" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>566</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E396406" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115637" e_stop="116095"/>
          <exon e_start="116176" e_stop="116282"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAAGTCTGCCAGGGACAGTTCTGGTCATGGAAGTCATACAGCTTCAACTGCTGCTGGGCGTTATGTAGCTGATATGAATTACAAAGGTTTGGCATCTGGAGGAGCCAGAGGTGGTGCCCCAATGGCCAGGATAGCAGTGTACAAAACCTGCTGGAGTTCTGGTTGCTATGATGTTGATTTGTTGGCTGCATTTGATGATGCAATTAGAGATGGGGTTCATGTCATTTCTATATCTTTGGGCCCAGATGCTCCCCAAGGAGATTATTTTAGTGATGCAATTTCTGTGGGGTCATTTCATGCTGTTAGCCGTGGGATACTTGTAGTGGCCTCCGTTGGAAATGAAGGAACCTCTGGTTCAGCCACAAATTTAGCTCCTTGGATGATCACAGTTGCAGCCAGTTCAACCGATAGAGATTTTACATCTGATGTTTTACTAGGAAATAGAGTTCAACTCACGGTAATCCCACTTTTCGAATAGTTCATATGTGAAGTTATATCCAGTTTCTATCTCCTCATTATGTTCTGGATATTTGGAAGGGTGAAAGTCTTAGCTTATCTCAAATGCATACATCTGCAAAAATCATACCTGCTTCTGAAGCTTATGCTGGATACTTCACTCCTTATCAATCCAGGTGAAGCAGAAG</genome_strand>
        <mrna_strand>TTCAAGTCTGCCAGGGACAGTTCTGGTCATGGAAGTCATACAGCTTCAACTGCTGCTGGGCGTTATGTAGCTGATATGAATTACAAAGGTTTGGCATCTGGAGGAGCCAGAGGTGGTGCCCCAATGGCCAGGATAGCAGTGTACAAAACCTGCTGGAGTTCTGGTTGCTATGATGTTGATTTGTTGGCTGCATTTGATGATGCAATTAGAGATGGGGTTCATGTCATTTCTATATCTTTGGGCCCAGATGCTCCCCAAGGAGATTATTTTAGTGATGCAATTTCTGTGGGGTCATTTCATGCTGTTAGCCGTGGGATACTTGTAGTGGCCTCCGTTGGAAATGAAGGAACCTCTGGTTCAGCCACAAATTTAGCTCCTTGGATGATCACAGTTGCAGCCAGTTCAACCGATAGAGATTTTACATCTGATGTTTTACTAGGAAATAGAGTTCAACTCACG................................................................................GGTGAAAGTCTTAGCTTATCTCAAATGCATACATCTGCAAAAATCATACCTGCTTCTGAAGCTTATGCTGGATACTTCACTCCTTATCAATCCAGGTGAAGCAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E276528" ref_strand="+" ref_description="SGN-E276528 [cLEN-17-A12]">
      <seq>tcaagtctgccagggacagttctggtcatggaagtcatacagcttcaactgctgctgggcgttatgtagctgatatgaattacaaaggtttggcatctggaggagccagaggtggtgccccaatggccaggatagcagtgtacaaaacctgctggagttctggttgctatgatgttgatttgttggctgcatttgatgatgcaattagagatggggttcatgtcatttctatatctttgggcccagatgctccccaaggagattattttagtgatgcaatttctgtggggtcatttcatgctgttagccgtgggatacttgtagtggcctccgttggaaatgaaggaacctctggttcagccacaaatttagctccttggatgatcacagttgcagccagttcaaccgatagagattttacatctgatgttttactaggaaatagagttcaactcacgggtgaaagtcttagcttatctcaaatgcatacatctgcaaaaatcatacctgcttctgaagcttatgctggatacttcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="115338" stop="116555"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115638" g_stop="116095" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="458" r_length="458" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116096" i_stop="116175" i_length="80">
            <donor d_prob="0.904" d_score="1.00"/>
            <acceptor a_prob="0.766" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="116176" g_stop="116255" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="459" r_stop="538" r_length="80" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E276528" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>538</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E276528" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115638" e_stop="116095"/>
          <exon e_start="116176" e_stop="116255"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGTCTGCCAGGGACAGTTCTGGTCATGGAAGTCATACAGCTTCAACTGCTGCTGGGCGTTATGTAGCTGATATGAATTACAAAGGTTTGGCATCTGGAGGAGCCAGAGGTGGTGCCCCAATGGCCAGGATAGCAGTGTACAAAACCTGCTGGAGTTCTGGTTGCTATGATGTTGATTTGTTGGCTGCATTTGATGATGCAATTAGAGATGGGGTTCATGTCATTTCTATATCTTTGGGCCCAGATGCTCCCCAAGGAGATTATTTTAGTGATGCAATTTCTGTGGGGTCATTTCATGCTGTTAGCCGTGGGATACTTGTAGTGGCCTCCGTTGGAAATGAAGGAACCTCTGGTTCAGCCACAAATTTAGCTCCTTGGATGATCACAGTTGCAGCCAGTTCAACCGATAGAGATTTTACATCTGATGTTTTACTAGGAAATAGAGTTCAACTCACGGTAATCCCACTTTTCGAATAGTTCATATGTGAAGTTATATCCAGTTTCTATCTCCTCATTATGTTCTGGATATTTGGAAGGGTGAAAGTCTTAGCTTATCTCAAATGCATACATCTGCAAAAATCATACCTGCTTCTGAAGCTTATGCTGGATACTTCAC</genome_strand>
        <mrna_strand>TCAAGTCTGCCAGGGACAGTTCTGGTCATGGAAGTCATACAGCTTCAACTGCTGCTGGGCGTTATGTAGCTGATATGAATTACAAAGGTTTGGCATCTGGAGGAGCCAGAGGTGGTGCCCCAATGGCCAGGATAGCAGTGTACAAAACCTGCTGGAGTTCTGGTTGCTATGATGTTGATTTGTTGGCTGCATTTGATGATGCAATTAGAGATGGGGTTCATGTCATTTCTATATCTTTGGGCCCAGATGCTCCCCAAGGAGATTATTTTAGTGATGCAATTTCTGTGGGGTCATTTCATGCTGTTAGCCGTGGGATACTTGTAGTGGCCTCCGTTGGAAATGAAGGAACCTCTGGTTCAGCCACAAATTTAGCTCCTTGGATGATCACAGTTGCAGCCAGTTCAACCGATAGAGATTTTACATCTGATGTTTTACTAGGAAATAGAGTTCAACTCACG................................................................................GGTGAAAGTCTTAGCTTATCTCAAATGCATACATCTGCAAAAATCATACCTGCTTCTGAAGCTTATGCTGGATACTTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E246938" ref_strand="+" ref_description="SGN-E246938 [cLEF-41-L2]">
      <seq>tctggttgctatgatgttgatttgttggctgcatttgatgatgcaattagagatggggttcatgtcatttctatatctttgggcccagatgctccccaaggagattattttagtgatgcaatttctgtggggtcatttcatgctgttagccgtgggatacttgtagtggcctccgttggaaatgaaggaacctctggttcagccacaaatttagctccttggatgatcacagttgcagccagttcaaccgatagagattttacatctgatgttttactaggaaatagagttcaactcacgggtgaaagtcttagcttatctcaaatgcatacatctgcaaaaatcatacctgcttctgaagcttatgctggatacttcactccttatcaatccaggtgaagcagaaggtacttaactgtttgttaattgtagatatgtatgcattgacaattatattaaagtacttttcgttcctatcttttccactagttattgcttagatagttctttgaatagaactaaggccaaagggaaggttcttgtgtgtcgacatgctggaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="115496" stop="116737"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115796" g_stop="116095" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="300" r_length="300" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116096" i_stop="116175" i_length="80">
            <donor d_prob="0.904" d_score="1.00"/>
            <acceptor a_prob="0.766" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="116176" g_stop="116437" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="562" r_length="262" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E246938" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E246938" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115796" e_stop="116095"/>
          <exon e_start="116176" e_stop="116437"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGGTTGCTATGATGTTGATTTGTTGGCTGCATTTGATGATGCAATTAGAGATGGGGTTCATGTCATTTCTATATCTTTGGGCCCAGATGCTCCCCAAGGAGATTATTTTAGTGATGCAATTTCTGTGGGGTCATTTCATGCTGTTAGCCGTGGGATACTTGTAGTGGCCTCCGTTGGAAATGAAGGAACCTCTGGTTCAGCCACAAATTTAGCTCCTTGGATGATCACAGTTGCAGCCAGTTCAACCGATAGAGATTTTACATCTGATGTTTTACTAGGAAATAGAGTTCAACTCACGGTAATCCCACTTTTCGAATAGTTCATATGTGAAGTTATATCCAGTTTCTATCTCCTCATTATGTTCTGGATATTTGGAAGGGTGAAAGTCTTAGCTTATCTCAAATGCATACATCTGCAAAAATCATACCTGCTTCTGAAGCTTATGCTGGATACTTCACTCCTTATCAATCCAGGTGAAGCAGAAGGTACTTAACTGTTTGTTAATTGTAGATATGTATGCATTGACAATTATATTAAAGTACTTTTCGTTCCTATCTTTTCCACTAGTTATTGCTTAGATAGTTCTTTGAATAGAACTAAGGCCAAAGGGAAGGTTCTTGTGTGTCGACATGCTGGAAGC</genome_strand>
        <mrna_strand>TCTGGTTGCTATGATGTTGATTTGTTGGCTGCATTTGATGATGCAATTAGAGATGGGGTTCATGTCATTTCTATATCTTTGGGCCCAGATGCTCCCCAAGGAGATTATTTTAGTGATGCAATTTCTGTGGGGTCATTTCATGCTGTTAGCCGTGGGATACTTGTAGTGGCCTCCGTTGGAAATGAAGGAACCTCTGGTTCAGCCACAAATTTAGCTCCTTGGATGATCACAGTTGCAGCCAGTTCAACCGATAGAGATTTTACATCTGATGTTTTACTAGGAAATAGAGTTCAACTCACG................................................................................GGTGAAAGTCTTAGCTTATCTCAAATGCATACATCTGCAAAAATCATACCTGCTTCTGAAGCTTATGCTGGATACTTCACTCCTTATCAATCCAGGTGAAGCAGAAGGTACTTAACTGTTTGTTAATTGTAGATATGTATGCATTGACAATTATATTAAAGTACTTTTCGTTCCTATCTTTTCCACTAGTTATTGCTTAGATAGTTCTTTGAATAGAACTAAGGCCAAAGGGAAGGTTCTTGTGTGTCGACATGCTGGAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E245226" ref_strand="+" ref_description="SGN-E245226 [cLEF-44-B21]">
      <seq>tccccaaggagattattttagtgatgcaatttctgtggggtcatttcatgctgttagccgtgggatacttgtagtggcctccgttggaaatgaaggaacctctggttcagccacaaatttagctccttggatgatcacagttgcagccagttcaaccgatagagattttacatctgatgttttactaggaaatagagttcaactcacgggtgaaagtcttagcttatctcaaatgcatacatctgcaaaaatcatacctgcttctgaagcttatgctggatacttcactccttatcaatccaggtgaagcagaagttattgcttagatagttctttgaatagaactaaggccaaagggaaggttcttgtgtgtcgacatgctggaagctcaagtgagtcaaagctggagaaaagcaatatagttaaacaagctggtggagttgggatgatccttattgatgaagcagacaagggtgtggctattcccttctccattccagcagcaactgttgggcaaaagattggaaaaaagatcctagcttacattaataataca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="115588" stop="116905"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115888" g_stop="116095" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="208" r_length="208" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116096" i_stop="116175" i_length="80">
            <donor d_prob="0.904" d_score="1.00"/>
            <acceptor a_prob="0.766" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="116176" g_stop="116282" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="315" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="116283" i_stop="116364" i_length="82">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="116365" g_stop="116605" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="556" r_length="241" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E245226" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E245226" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115888" e_stop="116095"/>
          <exon e_start="116176" e_stop="116282"/>
          <exon e_start="116365" e_stop="116605"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCCAAGGAGATTATTTTAGTGATGCAATTTCTGTGGGGTCATTTCATGCTGTTAGCCGTGGGATACTTGTAGTGGCCTCCGTTGGAAATGAAGGAACCTCTGGTTCAGCCACAAATTTAGCTCCTTGGATGATCACAGTTGCAGCCAGTTCAACCGATAGAGATTTTACATCTGATGTTTTACTAGGAAATAGAGTTCAACTCACGGTAATCCCACTTTTCGAATAGTTCATATGTGAAGTTATATCCAGTTTCTATCTCCTCATTATGTTCTGGATATTTGGAAGGGTGAAAGTCTTAGCTTATCTCAAATGCATACATCTGCAAAAATCATACCTGCTTCTGAAGCTTATGCTGGATACTTCACTCCTTATCAATCCAGGTGAAGCAGAAGGTACTTAACTGTTTGTTAATTGTAGATATGTATGCATTGACAATTATATTAAAGTACTTTTCGTTCCTATCTTTTCCACTAGTTATTGCTTAGATAGTTCTTTGAATAGAACTAAGGCCAAAGGGAAGGTTCTTGTGTGTCGACATGCTGGAAGCTCAAGTGAGTCAAAGCTGGAGAAAAGCAATATAGTTAAACAAGCTGGTGGAGTTGGGATGATCCTTATTGATGAAGCAGACAAGGGTGTGGCTATTCCCTTCTCCATTCCAGCAGCAACTGTTGGGCAAAAGATTGGAAAAAAGATCCTAGCTTACATTAATAATACA</genome_strand>
        <mrna_strand>TCCCCAAGGAGATTATTTTAGTGATGCAATTTCTGTGGGGTCATTTCATGCTGTTAGCCGTGGGATACTTGTAGTGGCCTCCGTTGGAAATGAAGGAACCTCTGGTTCAGCCACAAATTTAGCTCCTTGGATGATCACAGTTGCAGCCAGTTCAACCGATAGAGATTTTACATCTGATGTTTTACTAGGAAATAGAGTTCAACTCACG................................................................................GGTGAAAGTCTTAGCTTATCTCAAATGCATACATCTGCAAAAATCATACCTGCTTCTGAAGCTTATGCTGGATACTTCACTCCTTATCAATCCAGGTGAAGCAGAAG..................................................................................TTATTGCTTAGATAGTTCTTTGAATAGAACTAAGGCCAAAGGGAAGGTTCTTGTGTGTCGACATGCTGGAAGCTCAAGTGAGTCAAAGCTGGAGAAAAGCAATATAGTTAAACAAGCTGGTGGAGTTGGGATGATCCTTATTGATGAAGCAGACAAGGGTGTGGCTATTCCCTTCTCCATTCCAGCAGCAACTGTTGGGCAAAAGATTGGAAAAAAGATCCTAGCTTACATTAATAATACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E345375" ref_strand="+" ref_description="SGN-E345375 [cTOF-13-E20]">
      <seq>aaagtcttagcttatctcaaatgcatacatctgcaaaaatcatacctgcttctgaagcttatgctggatacttcactccttatcaatccaggtgaagcagaagttattgcttagatagttctttgaatagaactaaggccaaagggaaggttcttgtgtgtcgacatgctggaagctcaagtgagtcaaagctggagaaaagcaatatagttaaacaagctggtggagttgggatgatccttattgatgaagcagacaagggtgtggctattcccttctccattccagcagcaactgttgggcaaaagattggaaaaaagatcctagcttacattaataatacacggttcacttctttgttagtggctgttgatatttgtttttattgttctttgatgttgttagcaatcatctcatctcttttatatttacagcctccctactgcaagaattctctctgctaaaactgttttgggagctcaacctgctcctcgagtaacagcattttcttcaagaggtcctaattctctaacaccagaaattttgaagcctgatattactgctcccggtttaaatatcctggcagcatggtccccagcaatgtctangttgaagttcaacatactctctggaacctncatggcttgccctcacata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="115880" stop="117466"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116180" g_stop="116282" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="103" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116283" i_stop="116364" i_length="82">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="116365" g_stop="116810" g_length="446"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="549" r_length="446" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="116811" i_stop="117058" i_length="248">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="117059" g_stop="117166" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="550" r_stop="657" r_length="108" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E345375" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>657</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E345375" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116180" e_stop="116282"/>
          <exon e_start="116365" e_stop="116810"/>
          <exon e_start="117059" e_stop="117166"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGTCTTAGCTTATCTCAAATGCATACATCTGCAAAAATCATACCTGCTTCTGAAGCTTATGCTGGATACTTCACTCCTTATCAATCCAGGTGAAGCAGAAGGTACTTAACTGTTTGTTAATTGTAGATATGTATGCATTGACAATTATATTAAAGTACTTTTCGTTCCTATCTTTTCCACTAGTTATTGCTTAGATAGTTCTTTGAATAGAACTAAGGCCAAAGGGAAGGTTCTTGTGTGTCGACATGCTGGAAGCTCAAGTGAGTCAAAGCTGGAGAAAAGCAATATAGTTAAACAAGCTGGTGGAGTTGGGATGATCCTTATTGATGAAGCAGACAAGGGTGTGGCTATTCCCTTCTCCATTCCAGCAGCAACTGTTGGGCAAAAGATTGGAAAAAAGATCCTAGCTTACATTAATAATACACGGTTCACTTCTTTGTTAGTGGCTGTTGATATTTGTTTTTATTGTTCTTTGATGTTGTTAGCAATCATCTCATCTCTTTTATATTTACAGCCTCCCTACTGCAAGAATTCTCTCTGCTAAAACTGTTTTGGGAGCTCAACCTGCTCCTCGAGTAACAGCATTTTCTTCAAGAGGTCCTAATTCTCTAACACCAGAAATTTTGAAGGTAATTTATTTGCTTAAAATAGTACCGAATTAAAAGTCTTTCAACTGCTCCTTTGTTTTCTACATCGATCCCTCTTTGCATTTATCATTTAGACCAACAAAGTCTTATGTTGCATCCTGAGATTTCCTTCCAGGATCTTCAATGTGGTTTTAGATTCTTTCTTTTAACTTTGCATCTCTTTGTTCCTACTTTATATGAGGATTTACTTTTTTTCTTGCAAGTAATATACCTGCTGATTTTCCTTGTAGCCTGATATTACTGCTCCCGGTTTAAATATCCTGGCAGCATGGTCCCCAGCAATGTCTAGGTTGAAGTTCAACATACTCTCTGGAACCTCCATGGCTTGCCCTCACATA</genome_strand>
        <mrna_strand>AAAGTCTTAGCTTATCTCAAATGCATACATCTGCAAAAATCATACCTGCTTCTGAAGCTTATGCTGGATACTTCACTCCTTATCAATCCAGGTGAAGCAGAAG..................................................................................TTATTGCTTAGATAGTTCTTTGAATAGAACTAAGGCCAAAGGGAAGGTTCTTGTGTGTCGACATGCTGGAAGCTCAAGTGAGTCAAAGCTGGAGAAAAGCAATATAGTTAAACAAGCTGGTGGAGTTGGGATGATCCTTATTGATGAAGCAGACAAGGGTGTGGCTATTCCCTTCTCCATTCCAGCAGCAACTGTTGGGCAAAAGATTGGAAAAAAGATCCTAGCTTACATTAATAATACACGGTTCACTTCTTTGTTAGTGGCTGTTGATATTTGTTTTTATTGTTCTTTGATGTTGTTAGCAATCATCTCATCTCTTTTATATTTACAGCCTCCCTACTGCAAGAATTCTCTCTGCTAAAACTGTTTTGGGAGCTCAACCTGCTCCTCGAGTAACAGCATTTTCTTCAAGAGGTCCTAATTCTCTAACACCAGAAATTTTGAAG........................................................................................................................................................................................................................................................CCTGATATTACTGCTCCCGGTTTAAATATCCTGGCAGCATGGTCCCCAGCAATGTCTANGTTGAAGTTCAACATACTCTCTGGAACCTNCATGGCTTGCCCTCACATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E273399" ref_strand="+" ref_description="SGN-E273399 [cLEN-3-N6]">
      <seq>gagctcaacctgctcctcgagtaacagcattttcttcaagaggtcctaattctctaacaccagaaattttgaagcctgatattactgctcccggtttaaatatcctggcagcatggtccccagcaatgtctaggttgaagttcaacatactctctggaacctccatggcttgccctcacatatcaggagttgttgccttgttaaaagccgtgcatccatcatggtctccctctgcaatcaaatcagccatcatgacaacagccaaactatcagatatgcatcacaaacccataatagtagatcctgaagggaagaaggctaatccatttgattttggttctggatttgttaaccccacgaaagtcctcaatcctggtctgatatatgatgcacaaccagaagattacagagcatttctttgttcaattggttatgacgagaaatctctgcatctaattacaagggacaacagaacgtgtgatcaaacctttgcatcgccaaatgaactaaattatccctccatcacagtaccaaacctcagaaacaattactcagtatctcgaactgtcacaaatgtgggaaagtcaaggagtacttacaaggcagttatatttgcaccaaagggtttaaatgttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="116437" stop="118131"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116737" g_stop="116810" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116811" i_stop="117058" i_length="248">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="117059" g_stop="117245" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="261" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="117246" i_stop="117454" i_length="209">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="117455" g_stop="117831" g_length="377"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="638" r_length="377" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E273399" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>638</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E273399" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116737" e_stop="116810"/>
          <exon e_start="117059" e_stop="117245"/>
          <exon e_start="117455" e_stop="117831"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCTCAACCTGCTCCTCGAGTAACAGCATTTTCTTCAAGAGGTCCTAATTCTCTAACACCAGAAATTTTGAAGGTAATTTATTTGCTTAAAATAGTACCGAATTAAAAGTCTTTCAACTGCTCCTTTGTTTTCTACATCGATCCCTCTTTGCATTTATCATTTAGACCAACAAAGTCTTATGTTGCATCCTGAGATTTCCTTCCAGGATCTTCAATGTGGTTTTAGATTCTTTCTTTTAACTTTGCATCTCTTTGTTCCTACTTTATATGAGGATTTACTTTTTTTCTTGCAAGTAATATACCTGCTGATTTTCCTTGTAGCCTGATATTACTGCTCCCGGTTTAAATATCCTGGCAGCATGGTCCCCAGCAATGTCTAGGTTGAAGTTCAACATACTCTCTGGAACCTCCATGGCTTGCCCTCACATATCAGGAGTTGTTGCCTTGTTAAAAGCCGTGCATCCATCATGGTCTCCCTCTGCAATCAAATCAGCCATCATGACAACAGGTAAACTAGATGCCTTACATAGTCTAACTATGCAACTCTTGATTCTGAGGTTTGCTTTAAAGAAGGAAAAGGGTGAGGGGATCAAGATTTGGTTTTGTTTGAGCATATTATCTTAAAAATACTTATGGTTTTATTTGAGCATTGTATGTTAATGTATAAAGTGAATTTAACTATTACAGAATAATCTAATGTCATGAATGTTAATGCAGCCAAACTATCAGATATGCATCACAAACCCATAATAGTAGATCCTGAAGGGAAGAAGGCTAATCCATTTGATTTTGGTTCTGGATTTGTTAACCCCACGAAAGTCCTCAATCCTGGTCTGATATATGATGCACAACCAGAAGATTACAGAGCATTTCTTTGTTCAATTGGTTATGACGAGAAATCTCTGCATCTAATTACAAGGGACAACAGAACGTGTGATCAAACCTTTGCATCGCCAAATGAACTAAATTATCCCTCCATCACAGTACCAAACCTCAGAAACAATTACTCAGTATCTCGAACTGTCACAAATGTGGGAAAGTCAAGGAGTACTTACAAGGCAGTTATATTTGCACCAAAGGGTATCAATGTTACT</genome_strand>
        <mrna_strand>GAGCTCAACCTGCTCCTCGAGTAACAGCATTTTCTTCAAGAGGTCCTAATTCTCTAACACCAGAAATTTTGAAG........................................................................................................................................................................................................................................................CCTGATATTACTGCTCCCGGTTTAAATATCCTGGCAGCATGGTCCCCAGCAATGTCTAGGTTGAAGTTCAACATACTCTCTGGAACCTCCATGGCTTGCCCTCACATATCAGGAGTTGTTGCCTTGTTAAAAGCCGTGCATCCATCATGGTCTCCCTCTGCAATCAAATCAGCCATCATGACAACAG.................................................................................................................................................................................................................CCAAACTATCAGATATGCATCACAAACCCATAATAGTAGATCCTGAAGGGAAGAAGGCTAATCCATTTGATTTTGGTTCTGGATTTGTTAACCCCACGAAAGTCCTCAATCCTGGTCTGATATATGATGCACAACCAGAAGATTACAGAGCATTTCTTTGTTCAATTGGTTATGACGAGAAATCTCTGCATCTAATTACAAGGGACAACAGAACGTGTGATCAAACCTTTGCATCGCCAAATGAACTAAATTATCCCTCCATCACAGTACCAAACCTCAGAAACAATTACTCAGTATCTCGAACTGTCACAAATGTGGGAAAGTCAAGGAGTACTTACAAGGCAGTTATATTTGCACCAAAGGGTTTAAATGTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E244877" ref_strand="+" ref_description="SGN-E244877 [cLEF-2-L9]">
      <seq>aacaccagattttttgaagcctgatattactgctcccgggggaaatatcctggcagcatggtgcccagcaatgtctaggttgaagttcaacatactctctggaacctccatggcttgccctcacatatcaagagttgttgccttgttaaaagccgtgcatccatcatggtctccctctgcaatcaaatcagccatcatgacaacagccaaactatcagatatgcatcacaaacccataatagtagatcctgaagggaagaaggctaatccattagattttggttctggatttggtaaccccacgaaagtcctcaatcctggtctgatatatgatgcacaaccagaagattacagagcatttctttgttcaattgggtatgacgagaaatctctggatctaattacaagggacaacaggaacgtgtgatcaaacctttgcatcgccaaatgaactaaatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="116749" stop="118007"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116792" g_stop="116810" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="19" r_length="19" r_score="0.895"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116811" i_stop="117058" i_length="248">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="0.990" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="117059" g_stop="117245" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="206" r_length="187" r_score="0.973"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="117246" i_stop="117454" i_length="209">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="117455" g_stop="117707" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="460" r_length="254" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E244877" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>459</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E244877" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116792" e_stop="116810"/>
          <exon e_start="117059" e_stop="117245"/>
          <exon e_start="117455" e_stop="117707"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACCAGAAATTTTGAAGGTAATTTATTTGCTTAAAATAGTACCGAATTAAAAGTCTTTCAACTGCTCCTTTGTTTTCTACATCGATCCCTCTTTGCATTTATCATTTAGACCAACAAAGTCTTATGTTGCATCCTGAGATTTCCTTCCAGGATCTTCAATGTGGTTTTAGATTCTTTCTTTTAACTTTGCATCTCTTTGTTCCTACTTTATATGAGGATTTACTTTTTTTCTTGCAAGTAATATACCTGCTGATTTTCCTTGTAGCCTGATATTACTGCTCCCGGTTTAAATATCCTGGCAGCATGGTCCCCAGCAATGTCTAGGTTGAAGTTCAACATACTCTCTGGAACCTCCATGGCTTGCCCTCACATATCAGGAGTTGTTGCCTTGTTAAAAGCCGTGCATCCATCATGGTCTCCCTCTGCAATCAAATCAGCCATCATGACAACAGGTAAACTAGATGCCTTACATAGTCTAACTATGCAACTCTTGATTCTGAGGTTTGCTTTAAAGAAGGAAAAGGGTGAGGGGATCAAGATTTGGTTTTGTTTGAGCATATTATCTTAAAAATACTTATGGTTTTATTTGAGCATTGTATGTTAATGTATAAAGTGAATTTAACTATTACAGAATAATCTAATGTCATGAATGTTAATGCAGCCAAACTATCAGATATGCATCACAAACCCATAATAGTAGATCCTGAAGGGAAGAAGGCTAATCCATTTGATTTTGGTTCTGGATTTGTTAACCCCACGAAAGTCCTCAATCCTGGTCTGATATATGATGCACAACCAGAAGATTACAGAGCATTTCTTTGTTCAATTGGTTATGACGAGAAATCTCTGCATCTAATTACAAGGGACAACA-GAACGTGTGATCAAACCTTTGCATCGCCAAATGAACTAAATTA</genome_strand>
        <mrna_strand>AACACCAGATTTTTTGAAG........................................................................................................................................................................................................................................................CCTGATATTACTGCTCCCGGGGGAAATATCCTGGCAGCATGGTGCCCAGCAATGTCTAGGTTGAAGTTCAACATACTCTCTGGAACCTCCATGGCTTGCCCTCACATATCAAGAGTTGTTGCCTTGTTAAAAGCCGTGCATCCATCATGGTCTCCCTCTGCAATCAAATCAGCCATCATGACAACAG.................................................................................................................................................................................................................CCAAACTATCAGATATGCATCACAAACCCATAATAGTAGATCCTGAAGGGAAGAAGGCTAATCCATTAGATTTTGGTTCTGGATTTGGTAACCCCACGAAAGTCCTCAATCCTGGTCTGATATATGATGCACAACCAGAAGATTACAGAGCATTTCTTTGTTCAATTGGGTATGACGAGAAATCTCTGGATCTAATTACAAGGGACAACAGGAACGTGTGATCAAACCTTTGCATCGCCAAATGAACTAAATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E244875" ref_strand="+" ref_description="SGN-E244875 [cLEF-2-L5]">
      <seq>aacaccagaaattttgaagcctgatattactgctcccggtttaaatatcctggcagcatggtccccagcaatgtctaagttgaagttcaacatactctctggaacctccatggcttgccctcacatatcaagagttgttgccttgttaaaagccgtgcatccatcatggtctccctctgcaatcaaatcagccattatgacaacagccaaactatcagatatgcatcacaaacccataatagtagatcctgaagggaagaacgctaatccatttgatttaggatctggatttgttaaccccacgaaagtcctcaatcctggtctgatatatgatgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="116753" stop="117885"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116792" g_stop="116810" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="19" r_length="19" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116811" i_stop="117058" i_length="248">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="117059" g_stop="117245" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="206" r_length="187" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="117246" i_stop="117454" i_length="209">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="117455" g_stop="117585" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="337" r_length="131" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E244875" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>337</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E244875" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116792" e_stop="116810"/>
          <exon e_start="117059" e_stop="117245"/>
          <exon e_start="117455" e_stop="117585"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACCAGAAATTTTGAAGGTAATTTATTTGCTTAAAATAGTACCGAATTAAAAGTCTTTCAACTGCTCCTTTGTTTTCTACATCGATCCCTCTTTGCATTTATCATTTAGACCAACAAAGTCTTATGTTGCATCCTGAGATTTCCTTCCAGGATCTTCAATGTGGTTTTAGATTCTTTCTTTTAACTTTGCATCTCTTTGTTCCTACTTTATATGAGGATTTACTTTTTTTCTTGCAAGTAATATACCTGCTGATTTTCCTTGTAGCCTGATATTACTGCTCCCGGTTTAAATATCCTGGCAGCATGGTCCCCAGCAATGTCTAGGTTGAAGTTCAACATACTCTCTGGAACCTCCATGGCTTGCCCTCACATATCAGGAGTTGTTGCCTTGTTAAAAGCCGTGCATCCATCATGGTCTCCCTCTGCAATCAAATCAGCCATCATGACAACAGGTAAACTAGATGCCTTACATAGTCTAACTATGCAACTCTTGATTCTGAGGTTTGCTTTAAAGAAGGAAAAGGGTGAGGGGATCAAGATTTGGTTTTGTTTGAGCATATTATCTTAAAAATACTTATGGTTTTATTTGAGCATTGTATGTTAATGTATAAAGTGAATTTAACTATTACAGAATAATCTAATGTCATGAATGTTAATGCAGCCAAACTATCAGATATGCATCACAAACCCATAATAGTAGATCCTGAAGGGAAGAAGGCTAATCCATTTGATTTTGGTTCTGGATTTGTTAACCCCACGAAAGTCCTCAATCCTGGTCTGATATATGATGCA</genome_strand>
        <mrna_strand>AACACCAGAAATTTTGAAG........................................................................................................................................................................................................................................................CCTGATATTACTGCTCCCGGTTTAAATATCCTGGCAGCATGGTCCCCAGCAATGTCTAAGTTGAAGTTCAACATACTCTCTGGAACCTCCATGGCTTGCCCTCACATATCAAGAGTTGTTGCCTTGTTAAAAGCCGTGCATCCATCATGGTCTCCCTCTGCAATCAAATCAGCCATTATGACAACAG.................................................................................................................................................................................................................CCAAACTATCAGATATGCATCACAAACCCATAATAGTAGATCCTGAAGGGAAGAACGCTAATCCATTTGATTTAGGATCTGGATTTGTTAACCCCACGAAAGTCCTCAATCCTGGTCTGATATATGATGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E274682" ref_strand="+" ref_description="SGN-E274682 [cLEN-13-I4]">
      <seq>agcctgatattactgctcccggtttaaatatcctggcagcatggtccccagcaatgtctaggttgaagttcaacatactctctggaacctccatggcttgccctcacatatcaggagttgttgccttgttaaaagccgtgcatccatcatggtctccctctgcaatcaaatcagccatcatgacaacagccaaactatcagatatgcatcacaaacccataatagtagatcctgaagggaagaaggctaatccatttgattttggttctggatttgttaaccccacgaaagtcctcaatcctggtctgatatatgatgcacaaccagaagattacagagcatttctttgttcaattggttatgacgagaaatctctgcatctaattacaagggacaacagaacgtgtgatcaaacctttgcatcgccaaatgaactaaattatccctccatcacagtaccaaacctcagaaacaattactcagtatctcgaactgtcacaaatgtgggaaagtcaaggagtacttacaaggcagttatatttgcaccaaagggtatcaatgttactgtggtgccgcgaagattagccttcactagatattaccagaagatgaatttcacagtgactttcaaagtggctgcacctacacagggatatgtctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="116757" stop="118226"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117057" g_stop="117245" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="189" r_length="189" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="117246" i_stop="117454" i_length="209">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="117455" g_stop="117926" g_length="472"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="661" r_length="472" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E274682" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E274682" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117057" e_stop="117245"/>
          <exon e_start="117455" e_stop="117926"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCCTGATATTACTGCTCCCGGTTTAAATATCCTGGCAGCATGGTCCCCAGCAATGTCTAGGTTGAAGTTCAACATACTCTCTGGAACCTCCATGGCTTGCCCTCACATATCAGGAGTTGTTGCCTTGTTAAAAGCCGTGCATCCATCATGGTCTCCCTCTGCAATCAAATCAGCCATCATGACAACAGGTAAACTAGATGCCTTACATAGTCTAACTATGCAACTCTTGATTCTGAGGTTTGCTTTAAAGAAGGAAAAGGGTGAGGGGATCAAGATTTGGTTTTGTTTGAGCATATTATCTTAAAAATACTTATGGTTTTATTTGAGCATTGTATGTTAATGTATAAAGTGAATTTAACTATTACAGAATAATCTAATGTCATGAATGTTAATGCAGCCAAACTATCAGATATGCATCACAAACCCATAATAGTAGATCCTGAAGGGAAGAAGGCTAATCCATTTGATTTTGGTTCTGGATTTGTTAACCCCACGAAAGTCCTCAATCCTGGTCTGATATATGATGCACAACCAGAAGATTACAGAGCATTTCTTTGTTCAATTGGTTATGACGAGAAATCTCTGCATCTAATTACAAGGGACAACAGAACGTGTGATCAAACCTTTGCATCGCCAAATGAACTAAATTATCCCTCCATCACAGTACCAAACCTCAGAAACAATTACTCAGTATCTCGAACTGTCACAAATGTGGGAAAGTCAAGGAGTACTTACAAGGCAGTTATATTTGCACCAAAGGGTATCAATGTTACTGTGGTGCCGCGAAGATTAGCCTTCACTAGATATTACCAGAAGATGAATTTCACAGTGACTTTCAAAGTGGCTGCACCTACACAGGGATATGTCTT</genome_strand>
        <mrna_strand>AGCCTGATATTACTGCTCCCGGTTTAAATATCCTGGCAGCATGGTCCCCAGCAATGTCTAGGTTGAAGTTCAACATACTCTCTGGAACCTCCATGGCTTGCCCTCACATATCAGGAGTTGTTGCCTTGTTAAAAGCCGTGCATCCATCATGGTCTCCCTCTGCAATCAAATCAGCCATCATGACAACAG.................................................................................................................................................................................................................CCAAACTATCAGATATGCATCACAAACCCATAATAGTAGATCCTGAAGGGAAGAAGGCTAATCCATTTGATTTTGGTTCTGGATTTGTTAACCCCACGAAAGTCCTCAATCCTGGTCTGATATATGATGCACAACCAGAAGATTACAGAGCATTTCTTTGTTCAATTGGTTATGACGAGAAATCTCTGCATCTAATTACAAGGGACAACAGAACGTGTGATCAAACCTTTGCATCGCCAAATGAACTAAATTATCCCTCCATCACAGTACCAAACCTCAGAAACAATTACTCAGTATCTCGAACTGTCACAAATGTGGGAAAGTCAAGGAGTACTTACAAGGCAGTTATATTTGCACCAAAGGGTATCAATGTTACTGTGGTGCCGCGAAGATTAGCCTTCACTAGATATTACCAGAAGATGAATTTCACAGTGACTTTCAAAGTGGCTGCACCTACACAGGGATATGTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E237676" ref_strand="+" ref_description="SGN-E237676 [cLED-19-M10]">
      <seq>acatatcaggagttgttgccttgttaaaagccgtgcatccatcatggtctccctctgcaatcaaatcagccatcatgacaacagccaaactatcagatatgcatcacaaacccataatagtagatcctgaagggaagaaggctaatccatttgattttggttctggatttgttaaccccacgaaagtcctcaatcctggtctgatatatgatgcacaaccagaagattacagagcatttctttgttcaattggttatgacgagaaatctctgcatctaattacaagggacaacagaacgtgtgatcaaacctttgcatcgccaaatgaactaaattatccctccatcacagtaccaaacctcagaaacaattactcagtatctcgaactgtcacaaatgtgggaaagtcaaggagtacttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="116862" stop="118092"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117162" g_stop="117245" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="117246" i_stop="117454" i_length="209">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="117455" g_stop="117792" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="422" r_length="338" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E237676" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>422</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E237676" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117162" e_stop="117245"/>
          <exon e_start="117455" e_stop="117792"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATATCAGGAGTTGTTGCCTTGTTAAAAGCCGTGCATCCATCATGGTCTCCCTCTGCAATCAAATCAGCCATCATGACAACAGGTAAACTAGATGCCTTACATAGTCTAACTATGCAACTCTTGATTCTGAGGTTTGCTTTAAAGAAGGAAAAGGGTGAGGGGATCAAGATTTGGTTTTGTTTGAGCATATTATCTTAAAAATACTTATGGTTTTATTTGAGCATTGTATGTTAATGTATAAAGTGAATTTAACTATTACAGAATAATCTAATGTCATGAATGTTAATGCAGCCAAACTATCAGATATGCATCACAAACCCATAATAGTAGATCCTGAAGGGAAGAAGGCTAATCCATTTGATTTTGGTTCTGGATTTGTTAACCCCACGAAAGTCCTCAATCCTGGTCTGATATATGATGCACAACCAGAAGATTACAGAGCATTTCTTTGTTCAATTGGTTATGACGAGAAATCTCTGCATCTAATTACAAGGGACAACAGAACGTGTGATCAAACCTTTGCATCGCCAAATGAACTAAATTATCCCTCCATCACAGTACCAAACCTCAGAAACAATTACTCAGTATCTCGAACTGTCACAAATGTGGGAAAGTCAAGGAGTACTTAC</genome_strand>
        <mrna_strand>ACATATCAGGAGTTGTTGCCTTGTTAAAAGCCGTGCATCCATCATGGTCTCCCTCTGCAATCAAATCAGCCATCATGACAACAG.................................................................................................................................................................................................................CCAAACTATCAGATATGCATCACAAACCCATAATAGTAGATCCTGAAGGGAAGAAGGCTAATCCATTTGATTTTGGTTCTGGATTTGTTAACCCCACGAAAGTCCTCAATCCTGGTCTGATATATGATGCACAACCAGAAGATTACAGAGCATTTCTTTGTTCAATTGGTTATGACGAGAAATCTCTGCATCTAATTACAAGGGACAACAGAACGTGTGATCAAACCTTTGCATCGCCAAATGAACTAAATTATCCCTCCATCACAGTACCAAACCTCAGAAACAATTACTCAGTATCTCGAACTGTCACAAATGTGGGAAAGTCAAGGAGTACTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E744759" ref_strand="+" ref_description="SGN-E744759 [GI|6688547]">
      <seq>gatcaaacctttgcatcgccaaatgaactaaattatccctccatcacagtaccaaacctcagaaacaattactcagtatctcgaactgtcacaaatgtgggaaagtcaaggagtacttacaaggcagttatatttgcaccaaagggtatcaatgttactgtggtgccgcgaagattagccttcactagatattaccagaagatgaatttcacagtgactttcaaagtggctgcacctacacagggatatgtctttgggtccttgtcatggaggaacaaaagaacatgggtaacatctccacttgttgtcagagcacattccaatatgggtactgtggtatagttcagctgcagtgcctatttatttgtgttatagacaggtaagtaacaagatattgcaaccagtagctgctgaaaatggttgcatgaagaagccaacacaaaattcttagaagaatacatgtaattagtagcagaatacaaataattagtaattctttattctatttgtcctttagttttgagttttggttcttgctacctagtcaggttttactaatagggatactgcaaattcttttacttgtctagtaattgcattatgtattggcaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="117373" stop="118584"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117673" g_stop="118283" g_length="611"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="610" r_length="610" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="611" polyA_stop="622"/>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-E744759" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>611</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E744759" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117673" e_stop="118283"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCAAACCTTTGCATCGCCAAATGAACTAAATTATCCCTCCATCACAGTACCAAACCTCAGAAACAATTACTCAGTATCTCGAACTGTCACAAATGTGGGAAAGTCAAGGAGTACTTACAAGGCAGTTATATTTGCACCAAAGGGTATCAATGTTACTGTGGTGCCGCGAAGATTAGCCTTCACTAGATATTACCAGAAGATGAATTTCACAGTGACTTTCAAAGTGGCTGCACCTACACAGGGATATGTCTTTGGGTCCTTGTCATGGAGGAACAAAAGAACATGGGTAACATCTCCACTTGTTGTCAGAGTGGCACATTCCAATATGGGTACTGTGGTATAGTTCAGCTGCAGTG-CTATTTATTTGTGTTATATA-AGGTAAGTAACAAGATATTGCAACCAGTAGCTGCTGAAAATGGTTGCATGAAGAAGCCAACACAAAATTCTTAGAAGAATACATGTAATTAGTAGCAGAATACAAATAATTAGTAATTCTTTATTCTATTTGTCCTTTAGTTTTGAGTTTTGGTTCTTGCTACCTAGTCAGGTTTTACTAATAGGGATACTGCAAATTCTTTTACTTGTCTAGTAATTGCATTATGTATTGGC</genome_strand>
        <mrna_strand>GATCAAACCTTTGCATCGCCAAATGAACTAAATTATCCCTCCATCACAGTACCAAACCTCAGAAACAATTACTCAGTATCTCGAACTGTCACAAATGTGGGAAAGTCAAGGAGTACTTACAAGGCAGTTATATTTGCACCAAAGGGTATCAATGTTACTGTGGTGCCGCGAAGATTAGCCTTCACTAGATATTACCAGAAGATGAATTTCACAGTGACTTTCAAAGTGGCTGCACCTACACAGGGATATGTCTTTGGGTCCTTGTCATGGAGGAACAAAAGAACATGGGTAACATCTCCACTTGTTGTCAGA---GCACATTCCAATATGGGTACTGTGGTATAGTTCAGCTGCAGTGCCTATTTATTTGTGTTATAGACAGGTAAGTAACAAGATATTGCAACCAGTAGCTGCTGAAAATGGTTGCATGAAGAAGCCAACACAAAATTCTTAGAAGAATACATGTAATTAGTAGCAGAATACAAATAATTAGTAATTCTTTATTCTATTTGTCCTTTAGTTTTGAGTTTTGGTTCTTGCTACCTAGTCAGGTTTTACTAATAGGGATACTGCAAATTCTTTTACTTGTCTAGTAATTGCATTATGTATTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E541270" ref_strand="+" ref_description="SGN-E541270 [TUS-61-P16](-)">
      <seq>tgcatgcaatgccaattcaaaatgggttaaaacacaccaagagagtcccaccaaacgaagtttccccattattccaatatgctgagaaatcaacacctgaattctcgccagatacttccacttctggaaaagaatatcgggcattaaggagaaagtatctattgctggaagaagaaagttttggtcttaataaagaattgagagaaaccgatgatgagatcaaggcccttgaagacgagaagctaacactccttgatgatcttgttgtgttagaaggcctggttgatccttcagatattcaatcccaaggccagcgattatgatggtttatttataatgtgttttttcggtaaactggggatatatacagaattgtgtacaataatccaacttctgttagcataaagttgagattgtaacgatgccattatataacatcgactngattgtttattgcaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="119203" stop="118137"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="118903" g_stop="118437" g_length="467"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="469" r_length="469" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E541270" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>467</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E541270" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="118903" e_stop="118437"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCATGCAATGCCAATTCAAAATGGGTTAAAACACACCAAGAGAGTCCCACCAAACGAAGTTTCCCCATTATTCCAATATGCTGAGAAATCAACACCTGAATTCTCGCCAGATACTTCCACTTCTGGAAAAGAATATCGGGCATTAAGGAGAAAGTATCTATTGCTGGAAGAAGAAAGTTTTGGTCTTAATAAAGAATTGAGAGAAACCGATGATGAGATCAAGGCCCTTGAAGACGAGAAGCTAACACTCCTTGATGATCTTGTTGTGTTAGAAGGCCTGGTTGATCCTTCAGATATTCAATCCCAAGGCCAGCGATTATGATGGTTTATTTATAATGTGTTTTTTCGGTAAACTGGGGATATATACAGAATTGTGTACAATAATCCAACTTCTGTTAGCATAAAGTTGAGATTGTAACGATG-CATTATATAACATCGACT-GATTGTTTATTGCACAATTACCAAA</genome_strand>
        <mrna_strand>TGCATGCAATGCCAATTCAAAATGGGTTAAAACACACCAAGAGAGTCCCACCAAACGAAGTTTCCCCATTATTCCAATATGCTGAGAAATCAACACCTGAATTCTCGCCAGATACTTCCACTTCTGGAAAAGAATATCGGGCATTAAGGAGAAAGTATCTATTGCTGGAAGAAGAAAGTTTTGGTCTTAATAAAGAATTGAGAGAAACCGATGATGAGATCAAGGCCCTTGAAGACGAGAAGCTAACACTCCTTGATGATCTTGTTGTGTTAGAAGGCCTGGTTGATCCTTCAGATATTCAATCCCAAGGCCAGCGATTATGATGGTTTATTTATAATGTGTTTTTTCGGTAAACTGGGGATATATACAGAATTGTGTACAATAATCCAACTTCTGTTAGCATAAAGTTGAGATTGTAACGATGCCATTATATAACATCGACTNGATTGTTTATTGCAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E548522" ref_strand="+" ref_description="SGN-E548522 [TUS-61-P16]">
      <seq>tgcatgcaatgccaattcaaaatgggttaaaacacaccaagagagtcccaccaaacgaagtttccccattattccaatatgctgagaaatcaacacctgaattctcgccagatacttccacttctggaaaagaatatcgggcattaaggagaaagtatctattgctggaagaagaaagttttggtcttaataaagaattgagagaaaccgatgatgagatcaaggcccttgaagacgagaagctaacactccttgatgatcttgttgtgttagaaggcctggttgatccttcagatattcaatcccaaggccagcgattatgatggtttatttataatgtgttttttcggtaaactggggatatatacagaattgtgtacaataatccaacttctgttagcataaagttgagattgtaacgatgcattatataacatcgactgattgtttattgcaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="119203" stop="118137"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="118903" g_stop="118437" g_length="467"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="467" r_length="467" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E548522" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>467</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E548522" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="118903" e_stop="118437"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCATGCAATGCCAATTCAAAATGGGTTAAAACACACCAAGAGAGTCCCACCAAACGAAGTTTCCCCATTATTCCAATATGCTGAGAAATCAACACCTGAATTCTCGCCAGATACTTCCACTTCTGGAAAAGAATATCGGGCATTAAGGAGAAAGTATCTATTGCTGGAAGAAGAAAGTTTTGGTCTTAATAAAGAATTGAGAGAAACCGATGATGAGATCAAGGCCCTTGAAGACGAGAAGCTAACACTCCTTGATGATCTTGTTGTGTTAGAAGGCCTGGTTGATCCTTCAGATATTCAATCCCAAGGCCAGCGATTATGATGGTTTATTTATAATGTGTTTTTTCGGTAAACTGGGGATATATACAGAATTGTGTACAATAATCCAACTTCTGTTAGCATAAAGTTGAGATTGTAACGATGCATTATATAACATCGACTGATTGTTTATTGCACAATTACCAAA</genome_strand>
        <mrna_strand>TGCATGCAATGCCAATTCAAAATGGGTTAAAACACACCAAGAGAGTCCCACCAAACGAAGTTTCCCCATTATTCCAATATGCTGAGAAATCAACACCTGAATTCTCGCCAGATACTTCCACTTCTGGAAAAGAATATCGGGCATTAAGGAGAAAGTATCTATTGCTGGAAGAAGAAAGTTTTGGTCTTAATAAAGAATTGAGAGAAACCGATGATGAGATCAAGGCCCTTGAAGACGAGAAGCTAACACTCCTTGATGATCTTGTTGTGTTAGAAGGCCTGGTTGATCCTTCAGATATTCAATCCCAAGGCCAGCGATTATGATGGTTTATTTATAATGTGTTTTTTCGGTAAACTGGGGATATATACAGAATTGTGTACAATAATCCAACTTCTGTTAGCATAAAGTTGAGATTGTAACGATGCATTATATAACATCGACTGATTGTTTATTGCAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E295636" ref_strand="+" ref_description="SGN-E295636 [cLET-25-A16]">
      <seq>gcatgcaatgccaattcaaaatgggttaaaacacaccaagagagtcccaccaaacgaagtttccccattattccaatatgctgagaaatcaacacctgaattctcgccagatacttccacttctggaaaagaatatcgggcattaaggagaaagtatctattgctggaagaagaaagttttggtcttaataaagaattgagagaaaccgatgatgagatcaaggcccttgaagacgagaagctaacactccttgatgatcttgttgtgttagaaggcctggttgatccttcagatattgaatcccaaggccagcgattatgatgggttatttataatgggttttttcggtaaactggggatatatacagaattgtgtacaataatccaacttctgttagcataaagttgagattgtaacgatgcattatataacatcgactgattggttattgcagaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="119202" stop="118138"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="118902" g_stop="118438" g_length="465"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="465" r_length="465" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-E295636" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>465</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E295636" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="118902" e_stop="118438"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCATGCAATGCCAATTCAAAATGGGTTAAAACACACCAAGAGAGTCCCACCAAACGAAGTTTCCCCATTATTCCAATATGCTGAGAAATCAACACCTGAATTCTCGCCAGATACTTCCACTTCTGGAAAAGAATATCGGGCATTAAGGAGAAAGTATCTATTGCTGGAAGAAGAAAGTTTTGGTCTTAATAAAGAATTGAGAGAAACCGATGATGAGATCAAGGCCCTTGAAGACGAGAAGCTAACACTCCTTGATGATCTTGTTGTGTTAGAAGGCCTGGTTGATCCTTCAGATATTCAATCCCAAGGCCAGCGATTATGATGGTTTATTTATAATGTGTTTTTTCGGTAAACTGGGGATATATACAGAATTGTGTACAATAATCCAACTTCTGTTAGCATAAAGTTGAGATTGTAACGATGCATTATATAACATCGACTGATTGTTTATTGCACAATTACCAA</genome_strand>
        <mrna_strand>GCATGCAATGCCAATTCAAAATGGGTTAAAACACACCAAGAGAGTCCCACCAAACGAAGTTTCCCCATTATTCCAATATGCTGAGAAATCAACACCTGAATTCTCGCCAGATACTTCCACTTCTGGAAAAGAATATCGGGCATTAAGGAGAAAGTATCTATTGCTGGAAGAAGAAAGTTTTGGTCTTAATAAAGAATTGAGAGAAACCGATGATGAGATCAAGGCCCTTGAAGACGAGAAGCTAACACTCCTTGATGATCTTGTTGTGTTAGAAGGCCTGGTTGATCCTTCAGATATTGAATCCCAAGGCCAGCGATTATGATGGGTTATTTATAATGGGTTTTTTCGGTAAACTGGGGATATATACAGAATTGTGTACAATAATCCAACTTCTGTTAGCATAAAGTTGAGATTGTAACGATGCATTATATAACATCGACTGATTGGTTATTGCAGAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>106</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="320" PGL_stop="1877"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="320" e_stop="428"/>
            <exon e_start="581" e_stop="1877"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="0.991"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="320" e_stop="428" e_length="109"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="429" i_stop="580" i_length="152"/>
          </intron>
          <exon e_serial="2" e_score="0.990">
            <gDNA_exon_boundary e_start="581" e_stop="1877" e_length="1297"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="320" stop="428"/>
              <exon start="581" stop="1023"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331419" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="321" stop="428"/>
              <exon start="581" stop="853"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E361825" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="322" stop="428"/>
              <exon start="581" stop="979"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202361" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="339" stop="428"/>
              <exon start="581" stop="979"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302069" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="374" stop="428"/>
              <exon start="581" stop="1295"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317932" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="379" stop="428"/>
              <exon start="581" stop="961"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1171" stop="1684"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324510" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1230" stop="1877"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697638" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTTACTTTCTCTCTAAAGAAGACGATCGACCGCTTCCCGGCGATTGTTAACGATCCTCTTCCCTTTTTTTAAGGCTGCGAATTCTCTCTCTCCGGCGAAATCAAGCTT : ATGCGAGATTCTTTTTGACTGTTGCATAGCTATGTCGGTTAACAATAATAATAACCCTAACAAGAATATCGGAGGACCATCTTCCTTTGGCAATTCACCGCCGGGGAATCCGATGGCACATCTCCAGGCACAATCACAAGGCCAGCAACAGATGCCTTCAGGGTTTCCTGGGGCATTTCAGCTATCGCAGCTATCTGCTGCACATGCCCAAGCAATTGCTCAAGCTCAGTCGAAAGTTCAGGCTCATGCGCAAGCTCAAGCACAAGCTCAAGCTGCTCATGCCCAGTTTCAGGCCCAGTTACAGGCTCAGGGTTTATCTCTTAGCCAGGCTCATGCTCTTGGCAATTTTGGTTCTTCCTCACCCTCGATGCCTGGAAGTGCTTTGGCAAAACGCTTACCTCAGAAACCTCCTGTGCGGCCACCTGCATTCACAACTACTAACACAATTTCTCCAATGAGAACAATGGAGCTTTCAGCGGCTGCTCGTAGGAAAAAGCAGAAGCTTCCTGAGAAGCACATGAACGAGAAGGTGGCAGCCATTTTGCCTGAATCTTCCCTTTATACTCAGCTCCTTGAGTTTGAATCTCGGGTTGATTCCGCTTTAACAAGAAAGAAAGTTGACATCCAGGAGTCATTGAAGAATCCACCTACTATTCAGAAGACGCTTCGAATTTATGTATTCAATAGTTTTGCTAATCAGGTTCGTACCATTCCTAAGAAGCCAACAGCTGAACCTCCTACATGGACTCTTAAGATTGTAGGAAGGATTTTGGAGGAGGGAATGGATCCTGATCAAGCTGCCATGTTTCAGAAAACTAGCTCCATGTACCCAAAGTTCTCTACTTTCTTCAAAAGAGTCACCATTTCCTTGGACCAGAAACTCTATCCTGATAACCATATTATAATTTGGGACTCTGCGCGATCTCCTGCACCTCAGGATGGTTTTGAGGTCAAAAGAAAAGGAGAGCAAGAGTTCACTGCTAATTTAAGACTAGAATTGAATTACATGCCTGAGAAATACAAACTTTCACCAGCTTTAACTGAAGTTCTGGGTATTGAGGTTGAGACTCGTGCTAGAATTGTCTCTTCTATCTGGCATTATGTTAAGGCTCGAAAGTTGCAGAACCCTGATGATCCTTCTTACTTCAACTGTGATCCTCCACTTCAGAAAGTTTTTGGGGAAGGAAAGGTTAAGTTCAATACAGTCACACAAAAGATCACACCTCATTTGTCTCCTCCACAACCCATACATTTGGAACACAGGATTAAGCTTTCTGGAAATAACCCTGTTGGAACT</gDNA_template>
            <first_frame> I  Y  F  L  S  K  E  D  D  R  P  L  P  G  D  C  *  R  S  S  S  L  F  L  R  L  R  I  L  S  L  R  R  N  Q  A   : Y  A  R  F  F  L  T  V  A  *  L  C  R  L  T  I  I  I  T  L  T  R  I  S  E  D  H  L  P  L  A  I  H  R  R  G  I  R  W  H  I  S  R  H  N  H  K  A  S  N  R  C  L  Q  G  F  L  G  H  F  S  Y  R  S  Y  L  L  H  M  P  K  Q  L  L  K  L  S  R  K  F  R  L  M  R  K  L  K  H  K  L  K  L  L  M  P  S  F  R  P  S  Y  R  L  R  V  Y  L  L  A  R  L  M  L  L  A  I  L  V  L  P  H  P  R  C  L  E  V  L  W  Q  N  A  Y  L  R  N  L  L  C  G  H  L  H  S  Q  L  L  T  Q  F  L  Q  *  E  Q  W  S  F  Q  R  L  L  V  G  K  S  R  S  F  L  R  S  T  *  T  R  R  W  Q  P  F  C  L  N  L  P  F  I  L  S  S  L  S  L  N  L  G  L  I  P  L  *  Q  E  R  K  L  T  S  R  S  H  *  R  I  H  L  L  F  R  R  R  F  E  F  M  Y  S  I  V  L  L  I  R  F  V  P  F  L  R  S  Q  Q  L  N  L  L  H  G  L  L  R  L  *  E  G  F  W  R  R  E  W  I  L  I  K  L  P  C  F  R  K  L  A  P  C  T  Q  S  S  L  L  S  S  K  E  S  P  F  P  W  T  R  N  S  I  L  I  T  I  L  *  F  G  T  L  R  D  L  L  H  L  R  M  V  L  R  S  K  E  K  E  S  K  S  S  L  L  I  *  D  *  N  *  I  T  C  L  R  N  T  N  F  H  Q  L  *  L  K  F  W  V  L  R  L  R  L  V  L  E  L  S  L  L  S  G  I  M  L  R  L  E  S  C  R  T  L  M  I  L  L  T  S  T  V  I  L  H  F  R  K  F  L  G  K  E  R  L  S  S  I  Q  S  H  K  R  S  H  L  I  C  L  L  H  N  P  Y  I  W  N  T  G  L  S  F  L  E  I  T  L  L  E   </first_frame>
            <second_frame>  F  T  F  S  L  K  K  T  I  D  R  F  P  A  I  V  N  D  P  L  P  F  F  *  G  C  E  F  S  L  S  G  E  I  K  L  :  M  R  D  S  F  *  L  L  H  S  Y  V  G  *  Q  *  *  *  P  *  Q  E  Y  R  R  T  I  F  L  W  Q  F  T  A  G  E  S  D  G  T  S  P  G  T  I  T  R  P  A  T  D  A  F  R  V  S  W  G  I  S  A  I  A  A  I  C  C  T  C  P  S  N  C  S  S  S  V  E  S  S  G  S  C  A  S  S  S  T  S  S  S  C  S  C  P  V  S  G  P  V  T  G  S  G  F  I  S  *  P  G  S  C  S  W  Q  F  W  F  F  L  T  L  D  A  W  K  C  F  G  K  T  L  T  S  E  T  S  C  A  A  T  C  I  H  N  Y  *  H  N  F  S  N  E  N  N  G  A  F  S  G  C  S  *  E  K  A  E  A  S  *  E  A  H  E  R  E  G  G  S  H  F  A  *  I  F  P  L  Y  S  A  P  *  V  *  I  S  G  *  F  R  F  N  K  K  E  S  *  H  P  G  V  I  E  E  S  T  Y  Y  S  E  D  A  S  N  L  C  I  Q  *  F  C  *  S  G  S  Y  H  S  *  E  A  N  S  *  T  S  Y  M  D  S  *  D  C  R  K  D  F  G  G  G  N  G  S  *  S  S  C  H  V  S  E  N  *  L  H  V  P  K  V  L  Y  F  L  Q  K  S  H  H  F  L  G  P  E  T  L  S  *  *  P  Y  Y  N  L  G  L  C  A  I  S  C  T  S  G  W  F  *  G  Q  K  K  R  R  A  R  V  H  C  *  F  K  T  R  I  E  L  H  A  *  E  I  Q  T  F  T  S  F  N  *  S  S  G  Y  *  G  *  D  S  C  *  N  C  L  F  Y  L  A  L  C  *  G  S  K  V  A  E  P  *  *  S  F  L  L  Q  L  *  S  S  T  S  E  S  F  W  G  R  K  G  *  V  Q  Y  S  H  T  K  D  H  T  S  F  V  S  S  T  T  H  T  F  G  T  Q  D  *  A  F  W  K  *  P  C  W  N  </second_frame>
            <third_frame>   L  L  S  L  *  R  R  R  S  T  A  S  R  R  L  L  T  I  L  F  P  F  F  K  A  A  N  S  L  S  P  A  K  S  S  L :   C  E  I  L  F  D  C  C  I  A  M  S  V  N  N  N  N  N  P  N  K  N  I  G  G  P  S  S  F  G  N  S  P  P  G  N  P  M  A  H  L  Q  A  Q  S  Q  G  Q  Q  Q  M  P  S  G  F  P  G  A  F  Q  L  S  Q  L  S  A  A  H  A  Q  A  I  A  Q  A  Q  S  K  V  Q  A  H  A  Q  A  Q  A  Q  A  Q  A  A  H  A  Q  F  Q  A  Q  L  Q  A  Q  G  L  S  L  S  Q  A  H  A  L  G  N  F  G  S  S  S  P  S  M  P  G  S  A  L  A  K  R  L  P  Q  K  P  P  V  R  P  P  A  F  T  T  T  N  T  I  S  P  M  R  T  M  E  L  S  A  A  A  R  R  K  K  Q  K  L  P  E  K  H  M  N  E  K  V  A  A  I  L  P  E  S  S  L  Y  T  Q  L  L  E  F  E  S  R  V  D  S  A  L  T  R  K  K  V  D  I  Q  E  S  L  K  N  P  P  T  I  Q  K  T  L  R  I  Y  V  F  N  S  F  A  N  Q  V  R  T  I  P  K  K  P  T  A  E  P  P  T  W  T  L  K  I  V  G  R  I  L  E  E  G  M  D  P  D  Q  A  A  M  F  Q  K  T  S  S  M  Y  P  K  F  S  T  F  F  K  R  V  T  I  S  L  D  Q  K  L  Y  P  D  N  H  I  I  I  W  D  S  A  R  S  P  A  P  Q  D  G  F  E  V  K  R  K  G  E  Q  E  F  T  A  N  L  R  L  E  L  N  Y  M  P  E  K  Y  K  L  S  P  A  L  T  E  V  L  G  I  E  V  E  T  R  A  R  I  V  S  S  I  W  H  Y  V  K  A  R  K  L  Q  N  P  D  D  P  S  Y  F  N  C  D  P  P  L  Q  K  V  F  G  E  G  K  V  K  F  N  T  V  T  Q  K  I  T  P  H  L  S  P  P  Q  P  I  H  L  E  H  R  I  K  L  S  G  N  N  P  V  G  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="337" stop="428"/>
                    <exon start="581" stop="1877"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1389</number_coding_nucleotides>
                  <number_encoded_amino_acids>463</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RRRSTASRRLLTILFPFFKAANSLSPAKSSLCEILFDCCIAMSVNNNNNPNKNIGGPSSFGNSPPGNPMAHLQAQSQGQQQMPSGFPGAFQLSQLSAAHAQAIAQAQSKVQAHAQAQAQAQAAHAQFQAQLQAQGLSLSQAHALGNFGSSSPSMPGSALAKRLPQKPPVRPPAFTTTNTISPMRTMELSAAARRKKQKLPEKHMNEKVAAILPESSLYTQLLEFESRVDSALTRKKVDIQESLKNPPTIQKTLRIYVFNSFANQVRTIPKKPTAEPPTWTLKIVGRILEEGMDPDQAAMFQKTSSMYPKFSTFFKRVTISLDQKLYPDNHIIIWDSARSPAPQDGFEVKRKGEQEFTANLRLELNYMPEKYKLSPALTEVLGIEVETRARIVSSIWHYVKARKLQNPDDPSYFNCDPPLQKVFGEGKVKFNTVTQKITPHLSPPQPIHLEHRIKLSGNNPVGT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="4614" PGL_stop="8376"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="4614" e_stop="4711"/>
            <exon e_start="4813" e_stop="4900"/>
            <exon e_start="4978" e_stop="5072"/>
            <exon e_start="7519" e_stop="7595"/>
            <exon e_start="7893" e_stop="8376"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.983" acc_prob="0.996" e_score="0.980"/>
          <exon-intron don_prob="0.999" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.848" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="4614" e_stop="4711" e_length="98"/>
          </exon>
          <intron i_serial="1" don_prob="0.983" acc_prob="0.996">
            <gDNA_intron_boundary i_start="4712" i_stop="4812" i_length="101"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="4813" e_stop="4900" e_length="88"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.996">
            <gDNA_intron_boundary i_start="4901" i_stop="4977" i_length="77"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="4978" e_stop="5072" e_length="95"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.848">
            <gDNA_intron_boundary i_start="5073" i_stop="7518" i_length="2446"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="7519" e_stop="7595" e_length="77"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="7596" i_stop="7892" i_length="297"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="7893" e_stop="8376" e_length="484"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4614" stop="4711"/>
              <exon start="4813" stop="4900"/>
              <exon start="4978" stop="5072"/>
              <exon start="7519" stop="7595"/>
              <exon start="7893" stop="8373"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E718594" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4654" stop="4711"/>
              <exon start="4813" stop="4900"/>
              <exon start="4978" stop="5072"/>
              <exon start="7519" stop="7595"/>
              <exon start="7893" stop="8249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315578" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4694" stop="4711"/>
              <exon start="4813" stop="4900"/>
              <exon start="4978" stop="5072"/>
              <exon start="7519" stop="7595"/>
              <exon start="7893" stop="8376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E687607" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4695" stop="4711"/>
              <exon start="4813" stop="4900"/>
              <exon start="4978" stop="5072"/>
              <exon start="7519" stop="7595"/>
              <exon start="7893" stop="8238"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322646" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4815" stop="4900"/>
              <exon start="4978" stop="5072"/>
              <exon start="7519" stop="7595"/>
              <exon start="7893" stop="8364"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E700804" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAAGTTTCCAGACGCAGCTTGATTGGGGGTAGGGCTGGAAGATATAGGCGCGAAGCTTCAATCAGATTATCGGGTTTTCTTAGCTCAACAAAAATAT : GAGGCATTCGGTGAATCGTCCACCAACACCTGATACACGGGATGAACAAGAAAAGGAGCCTACACTTAAGGAAATTATCAACATTAAG : TTGATTGAAAGTGGGGAAAAGGAAAGATTAATGGAGCTTTTGAGGGAAAGGCTTGTTGAGTCTGGGTGGAAGGATGAAATGAAAGCTCTTTGTAG : GGAGTATATAAAGAAGAAAGGACGGAACAATATAACCATTGACGACCTTGTACATGTGATTACCCCAAAAGGCAGAG : CTTCAATTCCTGATCCGATCAAAGCTGAATTGCTTCAGAGAATTCGTACATTTCTTGTTTCTCCCACTCTCTGATTCAACAGCTTCATGCATGAAGAGGGTAGCAATATAGGTGAAGATGTGGCATTATGTTTGACTCATTTCATCTTGGAACATCGTTTGTCTAGATTATGACCACGATGAGGAAACCAGGAGCCATATGAGAAGATGTGCTATTGGCAGTTTGCTTGTACCAAGTTTCGTAGAACTGTATAAATTGCTACTTGGTGGTTTTATGTTGATGGCCCAGGTTCAGAGTTTGATCACTACATGACCCTCACCTTTTAGTGGCTAAACTATCTGTTATCTGGTTGTCCCTAGTTTTAAGAAAGTGTAGTTTTATTGAGATGCCTGCTCCTCAGCAGAATCCCTGCTCTTCTTTTGTGTGTACTTTACTCATGTGTTCTTCGTATTAGTGAAAGCCAGTTGGTTGTGTGTTCTCTCTA</gDNA_template>
            <first_frame> R  S  F  Q  T  Q  L  D  W  G  *  G  W  K  I  *  A  R  S  F  N  Q  I  I  G  F  S  *  L  N  K  N  M :   R  H  S  V  N  R  P  P  T  P  D  T  R  D  E  Q  E  K  E  P  T  L  K  E  I  I  N  I  K  :  L  I  E  S  G  E  K  E  R  L  M  E  L  L  R  E  R  L  V  E  S  G  W  K  D  E  M  K  A  L  C  R :   E  Y  I  K  K  K  G  R  N  N  I  T  I  D  D  L  V  H  V  I  T  P  K  G  R   : A  S  I  P  D  P  I  K  A  E  L  L  Q  R  I  R  T  F  L  V  S  P  T  L  *  F  N  S  F  M  H  E  E  G  S  N  I  G  E  D  V  A  L  C  L  T  H  F  I  L  E  H  R  L  S  R  L  *  P  R  *  G  N  Q  E  P  Y  E  K  M  C  Y  W  Q  F  A  C  T  K  F  R  R  T  V  *  I  A  T  W  W  F  Y  V  D  G  P  G  S  E  F  D  H  Y  M  T  L  T  F  *  W  L  N  Y  L  L  S  G  C  P  *  F  *  E  S  V  V  L  L  R  C  L  L  L  S  R  I  P  A  L  L  L  C  V  L  Y  S  C  V  L  R  I  S  E  S  Q  L  V  V  C  S  L   </first_frame>
            <second_frame>  E  V  S  R  R  S  L  I  G  G  R  A  G  R  Y  R  R  E  A  S  I  R  L  S  G  F  L  S  S  T  K  I   : *  G  I  R  *  I  V  H  Q  H  L  I  H  G  M  N  K  K  R  S  L  H  L  R  K  L  S  T  L  S :   *  L  K  V  G  K  R  K  D  *  W  S  F  *  G  K  G  L  L  S  L  G  G  R  M  K  *  K  L  F  V   : G  S  I  *  R  R  K  D  G  T  I  *  P  L  T  T  L  Y  M  *  L  P  Q  K  A  E  :  L  Q  F  L  I  R  S  K  L  N  C  F  R  E  F  V  H  F  L  F  L  P  L  S  D  S  T  A  S  C  M  K  R  V  A  I  *  V  K  M  W  H  Y  V  *  L  I  S  S  W  N  I  V  C  L  D  Y  D  H  D  E  E  T  R  S  H  M  R  R  C  A  I  G  S  L  L  V  P  S  F  V  E  L  Y  K  L  L  L  G  G  F  M  L  M  A  Q  V  Q  S  L  I  T  T  *  P  S  P  F  S  G  *  T  I  C  Y  L  V  V  P  S  F  K  K  V  *  F  Y  *  D  A  C  S  S  A  E  S  L  L  F  F  C  V  Y  F  T  H  V  F  F  V  L  V  K  A  S  W  L  C  V  L  S  </second_frame>
            <third_frame>   K  F  P  D  A  A  *  L  G  V  G  L  E  D  I  G  A  K  L  Q  S  D  Y  R  V  F  L  A  Q  Q  K  Y  :  E  A  F  G  E  S  S  T  N  T  *  Y  T  G  *  T  R  K  G  A  Y  T  *  G  N  Y  Q  H  *   : V  D  *  K  W  G  K  G  K  I  N  G  A  F  E  G  K  A  C  *  V  W  V  E  G  *  N  E  S  S  L  *  :  G  V  Y  K  E  E  R  T  E  Q  Y  N  H  *  R  P  C  T  C  D  Y  P  K  R  Q  S :   F  N  S  *  S  D  Q  S  *  I  A  S  E  N  S  Y  I  S  C  F  S  H  S  L  I  Q  Q  L  H  A  *  R  G  *  Q  Y  R  *  R  C  G  I  M  F  D  S  F  H  L  G  T  S  F  V  *  I  M  T  T  M  R  K  P  G  A  I  *  E  D  V  L  L  A  V  C  L  Y  Q  V  S  *  N  C  I  N  C  Y  L  V  V  L  C  *  W  P  R  F  R  V  *  S  L  H  D  P  H  L  L  V  A  K  L  S  V  I  W  L  S  L  V  L  R  K  C  S  F  I  E  M  P  A  P  Q  Q  N  P  C  S  S  F  V  C  T  L  L  M  C  S  S  Y  *  *  K  P  V  G  C  V  F  S  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4698" stop="4711"/>
                    <exon start="4813" stop="4900"/>
                    <exon start="4978" stop="5072"/>
                    <exon start="7519" stop="7595"/>
                    <exon start="7893" stop="7966"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>345</number_coding_nucleotides>
                  <number_encoded_amino_acids>115</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LNKNMRHSVNRPPTPDTRDEQEKEPTLKEIINIKLIESGEKERLMELLRERLVESGWKDEMKALCREYIKKKGRNNITIDDLVHVITPKGRASIPDPIKAELLQRIRTFLVSPTL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="14840" PGL_stop="10106"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14840" e_stop="14750"/>
            <exon e_start="13773" e_stop="13173"/>
            <exon e_start="12606" e_stop="12506"/>
            <exon e_start="10805" e_stop="10722"/>
            <exon e_start="10637" e_stop="10527"/>
            <exon e_start="10419" e_stop="10106"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.978" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="14840" e_stop="14750" e_length="91"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.989">
            <gDNA_intron_boundary i_start="14749" i_stop="13774" i_length="976"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="13773" e_stop="13173" e_length="601"/>
          </exon>
          <intron i_serial="2" don_prob="0.985" acc_prob="1.000">
            <gDNA_intron_boundary i_start="13172" i_stop="12607" i_length="566"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="12606" e_stop="12506" e_length="101"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="12505" i_stop="10806" i_length="1700"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="10805" e_stop="10722" e_length="84"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="10721" i_stop="10638" i_length="84"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="10637" e_stop="10527" e_length="111"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.978">
            <gDNA_intron_boundary i_start="10526" i_stop="10420" i_length="107"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="10419" e_stop="10106" e_length="314"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14840" stop="14750"/>
              <exon start="13773" stop="13173"/>
              <exon start="12606" stop="12506"/>
              <exon start="10805" stop="10722"/>
              <exon start="10637" stop="10527"/>
              <exon start="10419" stop="10106"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745968" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14830" stop="14750"/>
              <exon start="13773" stop="13349"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329839" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14821" stop="14750"/>
              <exon start="13773" stop="13294"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299816" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTGACAGCTGAGATAATAGGTGTAAGTTTTTTCAAAATACTTGAACTGGTGTTCAGCGTCTCTTCTCTGTGTCTTCCTGGAGAAGAAAAAG : GTAGGTTTTGGAGGTGTAAGTTAAATTGTCTGACTCCGCAACATGGATGGTATGAGCAGCTATTGGCAATTCGGGGATGAGCTTCGAGGACAATCAAAAGTATCGGAGGATCATACATGGACAACGGGTACTGTAAAATTGGCTGAGCAGTTAAGGTCCAAGGGTGAGCGGGTGAATAACCTTGACCTTTCGAAAAGCTCAGCTGAAAGTAGGTTCAGGGTTTATCTTGGTTTACAGGAAGATAACAAGTGGGAAAACCAATACCTCAACATGTTGAATTTTGATACCAAGATAACTGACAATACGACCAAGAGCTCCTTCAGTAATGACATTCACAACGTTAATTCTGTTTGTCCGAAATCCAATGTCAACAGCTTGGGAAATATGTCATTTAGCAAGTTCAGTAGCAACCACACAAATGACGCTAGCAGCTATGGCAATAACAAAAACACTGAGAGTATCAACGGGAACAATGCTGTTGACAAAAGGTTTAAGACTTTGCCTGCTGCTGAGACACTGCCCAGGAATGAGGTTCTTGGTGGGTATATCTTTGTTTGCAACAATGACACAATGCAGGAAGACTTGAAGCGCCAGCTGTTTG : GTCTACCTCCAAGGTACAAAGATTCTGTGAGGGCAATAACACCAGGGTTACCGTTGTTCCTCTACAATTACACTACTCACCAGTTGCATGGTATCTTTGAG : GCAACAAGTTTTGGAGGTTCTAACATTGATCCAACTGCTTGGGAAGATAAGAAGTGTAAAGGAGAGTCGAGGTTCCCTGCTCAG : GTGAAGATCCGTATCAGGAAACTTGGTAGGGCTTTGGAGGAAGATGCTTTTAGACCAGTGCTGCATCACTATGATGGACCCAAATTTCGTCTTGAGCTCTCTGTGCCCGAG : ACTTTGGACTTGATGGATCTCTTTGAAAATACCAGCGTGTTCGCGCCAGTCTGAAGTCATGGATTTATTATTTATTAGCATATATTATGAACTCATGAATATTGTAGTTTAGTAGTAGAAACGTGTTCTCCACAGATTTCCAAAGCACAATTTTGGTGTAAAGTCTGGCTGAGAGAGGTTCTGAATAGCAGGGTTGGCTAATTTAGCCAATGAAGTGTGATTTTGTTTGGAGATGCTTGAATATGAGCCTCCCAAATTTAGTGTTGTGATCTTATAATGAATTAGAGAAGTAATGATTGGGTGAAAGATTGAAC</gDNA_template>
            <first_frame> V  T  A  E  I  I  G  V  S  F  F  K  I  L  E  L  V  F  S  V  S  S  L  C  L  P  G  E  E  K   : G  R  F  W  R  C  K  L  N  C  L  T  P  Q  H  G  W  Y  E  Q  L  L  A  I  R  G  *  A  S  R  T  I  K  S  I  G  G  S  Y  M  D  N  G  Y  C  K  I  G  *  A  V  K  V  Q  G  *  A  G  E  *  P  *  P  F  E  K  L  S  *  K  *  V  Q  G  L  S  W  F  T  G  R  *  Q  V  G  K  P  I  P  Q  H  V  E  F  *  Y  Q  D  N  *  Q  Y  D  Q  E  L  L  Q  *  *  H  S  Q  R  *  F  C  L  S  E  I  Q  C  Q  Q  L  G  K  Y  V  I  *  Q  V  Q  *  Q  P  H  K  *  R  *  Q  L  W  Q  *  Q  K  H  *  E  Y  Q  R  E  Q  C  C  *  Q  K  V  *  D  F  A  C  C  *  D  T  A  Q  E  *  G  S  W  W  V  Y  L  C  L  Q  Q  *  H  N  A  G  R  L  E  A  P  A  V  W :   S  T  S  K  V  Q  R  F  C  E  G  N  N  T  R  V  T  V  V  P  L  Q  L  H  Y  S  P  V  A  W  Y  L  *   : G  N  K  F  W  R  F  *  H  *  S  N  C  L  G  R  *  E  V  *  R  R  V  E  V  P  C  S   : G  E  D  P  Y  Q  E  T  W  *  G  F  G  G  R  C  F  *  T  S  A  A  S  L  *  W  T  Q  I  S  S  *  A  L  C  A  R   : D  F  G  L  D  G  S  L  *  K  Y  Q  R  V  R  A  S  L  K  S  W  I  Y  Y  L  L  A  Y  I  M  N  S  *  I  L  *  F  S  S  R  N  V  F  S  T  D  F  Q  S  T  I  L  V  *  S  L  A  E  R  G  S  E  *  Q  G  W  L  I  *  P  M  K  C  D  F  V  W  R  C  L  N  M  S  L  P  N  L  V  L  *  S  Y  N  E  L  E  K  *  *  L  G  E  R  L  N </first_frame>
            <second_frame>  *  Q  L  R  *  *  V  *  V  F  S  K  Y  L  N  W  C  S  A  S  L  L  C  V  F  L  E  K  K  K  :  V  G  F  G  G  V  S  *  I  V  *  L  R  N  M  D  G  M  S  S  Y  W  Q  F  G  D  E  L  R  G  Q  S  K  V  S  E  D  H  T  W  T  T  G  T  V  K  L  A  E  Q  L  R  S  K  G  E  R  V  N  N  L  D  L  S  K  S  S  A  E  S  R  F  R  V  Y  L  G  L  Q  E  D  N  K  W  E  N  Q  Y  L  N  M  L  N  F  D  T  K  I  T  D  N  T  T  K  S  S  F  S  N  D  I  H  N  V  N  S  V  C  P  K  S  N  V  N  S  L  G  N  M  S  F  S  K  F  S  S  N  H  T  N  D  A  S  S  Y  G  N  N  K  N  T  E  S  I  N  G  N  N  A  V  D  K  R  F  K  T  L  P  A  A  E  T  L  P  R  N  E  V  L  G  G  Y  I  F  V  C  N  N  D  T  M  Q  E  D  L  K  R  Q  L  F   : G  L  P  P  R  Y  K  D  S  V  R  A  I  T  P  G  L  P  L  F  L  Y  N  Y  T  T  H  Q  L  H  G  I  F  E  :  A  T  S  F  G  G  S  N  I  D  P  T  A  W  E  D  K  K  C  K  G  E  S  R  F  P  A  Q  :  V  K  I  R  I  R  K  L  G  R  A  L  E  E  D  A  F  R  P  V  L  H  H  Y  D  G  P  K  F  R  L  E  L  S  V  P  E  :  T  L  D  L  M  D  L  F  E  N  T  S  V  F  A  P  V  *  S  H  G  F  I  I  Y  *  H  I  L  *  T  H  E  Y  C  S  L  V  V  E  T  C  S  P  Q  I  S  K  A  Q  F  W  C  K  V  W  L  R  E  V  L  N  S  R  V  G  *  F  S  Q  *  S  V  I  L  F  G  D  A  *  I  *  A  S  Q  I  *  C  C  D  L  I  M  N  *  R  S  N  D  W  V  K  D  *   </second_frame>
            <third_frame>   D  S  *  D  N  R  C  K  F  F  Q  N  T  *  T  G  V  Q  R  L  F  S  V  S  S  W  R  R  K  R :   *  V  L  E  V  *  V  K  L  S  D  S  A  T  W  M  V  *  A  A  I  G  N  S  G  M  S  F  E  D  N  Q  K  Y  R  R  I  I  H  G  Q  R  V  L  *  N  W  L  S  S  *  G  P  R  V  S  G  *  I  T  L  T  F  R  K  A  Q  L  K  V  G  S  G  F  I  L  V  Y  R  K  I  T  S  G  K  T  N  T  S  T  C  *  I  L  I  P  R  *  L  T  I  R  P  R  A  P  S  V  M  T  F  T  T  L  I  L  F  V  R  N  P  M  S  T  A  W  E  I  C  H  L  A  S  S  V  A  T  T  Q  M  T  L  A  A  M  A  I  T  K  T  L  R  V  S  T  G  T  M  L  L  T  K  G  L  R  L  C  L  L  L  R  H  C  P  G  M  R  F  L  V  G  I  S  L  F  A  T  M  T  Q  C  R  K  T  *  S  A  S  C  L  :  V  Y  L  Q  G  T  K  I  L  *  G  Q  *  H  Q  G  Y  R  C  S  S  T  I  T  L  L  T  S  C  M  V  S  L  R :   Q  Q  V  L  E  V  L  T  L  I  Q  L  L  G  K  I  R  S  V  K  E  S  R  G  S  L  L  R :   *  R  S  V  S  G  N  L  V  G  L  W  R  K  M  L  L  D  Q  C  C  I  T  M  M  D  P  N  F  V  L  S  S  L  C  P  R :   L  W  T  *  W  I  S  L  K  I  P  A  C  S  R  Q  S  E  V  M  D  L  L  F  I  S  I  Y  Y  E  L  M  N  I  V  V  *  *  *  K  R  V  L  H  R  F  P  K  H  N  F  G  V  K  S  G  *  E  R  F  *  I  A  G  L  A  N  L  A  N  E  V  *  F  C  L  E  M  L  E  Y  E  P  P  K  F  S  V  V  I  L  *  *  I  R  E  V  M  I  G  *  K  I  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13740" stop="13173"/>
                    <exon start="12606" stop="12506"/>
                    <exon start="10805" stop="10722"/>
                    <exon start="10637" stop="10527"/>
                    <exon start="10419" stop="10366"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>915</number_coding_nucleotides>
                  <number_encoded_amino_acids>305</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LRNMDGMSSYWQFGDELRGQSKVSEDHTWTTGTVKLAEQLRSKGERVNNLDLSKSSAESRFRVYLGLQEDNKWENQYLNMLNFDTKITDNTTKSSFSNDIHNVNSVCPKSNVNSLGNMSFSKFSSNHTNDASSYGNNKNTESINGNNAVDKRFKTLPAAETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYKDSVRAITPGLPLFLYNYTTHQLHGIFEATSFGGSNIDPTAWEDKKCKGESRFPAQVKIRIRKLGRALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLFENTSVFAPV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="17952" PGL_stop="24073"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17952" e_stop="18127"/>
            <exon e_start="18282" e_stop="18360"/>
            <exon e_start="18576" e_stop="18745"/>
            <exon e_start="18830" e_stop="18877"/>
            <exon e_start="23273" e_stop="23359"/>
            <exon e_start="23704" e_stop="24073"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.785" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.916" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="17952" e_stop="18127" e_length="176"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="18128" i_stop="18281" i_length="154"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="18282" e_stop="18360" e_length="79"/>
          </exon>
          <intron i_serial="2" don_prob="0.785" acc_prob="1.000">
            <gDNA_intron_boundary i_start="18361" i_stop="18575" i_length="215"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="18576" e_stop="18745" e_length="170"/>
          </exon>
          <intron i_serial="3" don_prob="0.916" acc_prob="0.989">
            <gDNA_intron_boundary i_start="18746" i_stop="18829" i_length="84"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="18830" e_stop="18877" e_length="48"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="18878" i_stop="23272" i_length="4395"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="23273" e_stop="23359" e_length="87"/>
          </exon>
          <intron i_serial="5" don_prob="0.978" acc_prob="0.992">
            <gDNA_intron_boundary i_start="23360" i_stop="23703" i_length="344"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="23704" e_stop="24073" e_length="370"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17952" stop="18127"/>
              <exon start="18282" stop="18360"/>
              <exon start="18576" stop="18745"/>
              <exon start="18830" stop="18877"/>
              <exon start="23273" stop="23359"/>
              <exon start="23704" stop="23976"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725314" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17955" stop="18127"/>
              <exon start="18282" stop="18360"/>
              <exon start="18576" stop="18745"/>
              <exon start="18830" stop="18877"/>
              <exon start="23273" stop="23359"/>
              <exon start="23704" stop="23976"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E721110" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17960" stop="18127"/>
              <exon start="18282" stop="18325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278312" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17965" stop="18127"/>
              <exon start="18282" stop="18360"/>
              <exon start="18576" stop="18745"/>
              <exon start="18830" stop="18877"/>
              <exon start="23273" stop="23331"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17968" stop="18127"/>
              <exon start="18282" stop="18360"/>
              <exon start="18576" stop="18689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319674" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17975" stop="18127"/>
              <exon start="18282" stop="18360"/>
              <exon start="18576" stop="18745"/>
              <exon start="18830" stop="18877"/>
              <exon start="23273" stop="23359"/>
              <exon start="23704" stop="24063"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17980" stop="18127"/>
              <exon start="18282" stop="18360"/>
              <exon start="18576" stop="18745"/>
              <exon start="18830" stop="18877"/>
              <exon start="23273" stop="23359"/>
              <exon start="23704" stop="23748"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310135" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17983" stop="18127"/>
              <exon start="18282" stop="18360"/>
              <exon start="18576" stop="18745"/>
              <exon start="18830" stop="18877"/>
              <exon start="23273" stop="23359"/>
              <exon start="23704" stop="23965"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E719221" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17990" stop="18127"/>
              <exon start="18282" stop="18360"/>
              <exon start="18576" stop="18745"/>
              <exon start="18830" stop="18877"/>
              <exon start="23273" stop="23351"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241952" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18011" stop="18127"/>
              <exon start="18282" stop="18360"/>
              <exon start="18576" stop="18745"/>
              <exon start="18830" stop="18877"/>
              <exon start="23273" stop="23359"/>
              <exon start="23704" stop="23808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274239" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18081" stop="18127"/>
              <exon start="18282" stop="18360"/>
              <exon start="18576" stop="18745"/>
              <exon start="18830" stop="18877"/>
              <exon start="23273" stop="23359"/>
              <exon start="23704" stop="23809"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269016" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18089" stop="18127"/>
              <exon start="18282" stop="18360"/>
              <exon start="18576" stop="18743"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251462" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18354" stop="18360"/>
              <exon start="18576" stop="18745"/>
              <exon start="18830" stop="18877"/>
              <exon start="23273" stop="23359"/>
              <exon start="23704" stop="24040"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357070" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18585" stop="18745"/>
              <exon start="18830" stop="18877"/>
              <exon start="23273" stop="23359"/>
              <exon start="23704" stop="24057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E373562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18738" stop="18745"/>
              <exon start="18830" stop="18877"/>
              <exon start="23273" stop="23359"/>
              <exon start="23704" stop="24073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578102" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23339" stop="23359"/>
              <exon start="23704" stop="24070"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278003" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGACCGACTGATAAAAACTAAGCAAGGGCAAAAGGATTTAGCTAGAACCCTAAACTGATCGAATCGAAGCAACTCAACAATGGAGATGCAAAGCGAATTCGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGAT : AACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTG : ATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCG : GATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAG : GCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAG : AGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGTTGCATGGGTGGGATTTGCAAAATCTAATATGCCTCCACCACCACCACCGCATCCACAGTGAAACCCATAATACAGCTTAGCTTTACTGGTGAAGATACTCTATTAGAGTTTTTCCTTTTGCATAAACAGGACCCTAGGCATTAATGCCTGTCATTTAGCTAGTTACTGAAACTTTATAACTTTCTGGTGAAAACTTTGAAGACTTTTTTTCTGTTGTAATAGATTAAATAAGACTTTTTTTCTGTTGTGATAGATCAAATAAGACTTTTTCTTTTAATCTCGGGATATTTTTCATG</gDNA_template>
            <first_frame> *  T  D  *  *  K  L  S  K  G  K  R  I  *  L  E  P  *  T  D  R  I  E  A  T  Q  Q  W  R  C  K  A  N  S  I  V  S  F  S  S  N  T  L  G  R  V  L  K  P  P  M  L  R  I  P  *  M  L  I :   T  *  R  G  G  E  V  H  C  W  N  Y  H  S  F  S  P  *  L  N  R  N  K  *  F  L  :  M  Q  H  Q  S  W  R  R  H  *  Q  *  T  L  K  S  M  M  R  F  G  V  W  E  M  L  I  H  H  M  L  F  *  L  L  I  W  M  R  L  R  F  T  L  K  K  Q  L  S  A  F  N  R  H  L  M  R :   I  P  Q  M  T  F  T  A  N  L  W  K  L  L  L  R :   L  Q  N  C  T  W  K  S  T  D  M  V  P  C  N  N  L  W  Q  Q  N  L  Q  H  R  Q  A  Q  R :   V  Q  K  R  R  R  A  V  I  S  S  M  T  F  L  G  G  S  Y  L  P  L  A  L  L  H  G  W  D  L  Q  N  L  I  C  L  H  H  H  H  R  I  H  S  E  T  H  N  T  A  *  L  Y  W  *  R  Y  S  I  R  V  F  P  F  A  *  T  G  P  *  A  L  M  P  V  I  *  L  V  T  E  T  L  *  L  S  G  E  N  F  E  D  F  F  S  V  V  I  D  *  I  R  L  F  F  C  C  D  R  S  N  K  T  F  S  F  N  L  G  I  F  F  M </first_frame>
            <second_frame>  R  P  T  D  K  N  *  A  R  A  K  G  F  S  *  N  P  K  L  I  E  S  K  Q  L  N  N  G  D  A  K  R  I  R  S  S  P  F  L  R  T  R  S  E  E  C  *  N  R  L  C  S  E  S  P  R  C  *   : *  L  D  E  V  G  R  C  I  A  G  I  I  T  V  S  A  R  S  *  I  E  T  N  D  F  * :   C  N  I  K  V  G  G  G  I  D  S  E  P  *  K  A  *  C  A  L  V  F  G  K  C  S  Y  I  T  C  F  F  N  S  *  Y  G  *  G  *  G  L  L  *  K  S  N  S  V  L  S  T  G  I  *  C   : G  S  L  K  *  P  L  P  Q  I  S  G  S  Y  C  *   : G  S  R  I  A  H  G  N  P  Q  T  W  S  H  A  T  T  Y  G  S  R  T  F  N  I  D  K  H  K   : E  F  K  K  E  E  E  Q  *  S  Q  V  *  H  F  W  V  G  H  T  C  R  W  H  C  C  M  G  G  I  C  K  I  *  Y  A  S  T  T  T  T  A  S  T  V  K  P  I  I  Q  L  S  F  T  G  E  D  T  L  L  E  F  F  L  L  H  K  Q  D  P  R  H  *  C  L  S  F  S  *  L  L  K  L  Y  N  F  L  V  K  T  L  K  T  F  F  L  L  *  *  I  K  *  D  F  F  S  V  V  I  D  Q  I  R  L  F  L  L  I  S  G  Y  F  S   </second_frame>
            <third_frame>   D  R  L  I  K  T  K  Q  G  Q  K  D  L  A  R  T  L  N  *  S  N  R  S  N  S  T  M  E  M  Q  S  E  F  D  R  L  L  F  F  E  H  A  R  K  S  A  E  T  A  Y  A  Q  N  P  L  D  A  D  :  N  L  T  R  W  G  G  A  L  L  E  L  S  Q  F  Q  P  V  A  E  S  K  Q  M  I  S   : D  A  T  S  K  L  E  E  A  L  T  V  N  P  E  K  H  D  A  L  W  C  L  G  N  A  H  T  S  H  A  F  L  T  P  D  M  D  E  A  K  V  Y  F  E  K  A  T  Q  C  F  Q  Q  A  F  D  A  :  D  P  S  N  D  L  Y  R  K  S  L  E  V  T  A  K  :  A  P  E  L  H  M  E  I  H  R  H  G  P  M  Q  Q  P  M  A  A  E  P  S  T  S  T  S  T  K  :  S  S  K  K  K  K  S  S  D  L  K  Y  D  I  F  G  W  V  I  L  A  V  G  I  V  A  W  V  G  F  A  K  S  N  M  P  P  P  P  P  P  H  P  Q  *  N  P  *  Y  S  L  A  L  L  V  K  I  L  Y  *  S  F  S  F  C  I  N  R  T  L  G  I  N  A  C  H  L  A  S  Y  *  N  F  I  T  F  W  *  K  L  *  R  L  F  F  C  C  N  R  L  N  K  T  F  F  L  L  *  *  I  K  *  D  F  F  F  *  S  R  D  I  F  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18011" stop="18127"/>
                    <exon start="18282" stop="18360"/>
                    <exon start="18576" stop="18745"/>
                    <exon start="18830" stop="18877"/>
                    <exon start="23273" stop="23359"/>
                    <exon start="23704" stop="23838"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>633</number_coding_nucleotides>
                  <number_encoded_amino_acids>211</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SNRSNSTMEMQSEFDRLLFFEHARKSAETAYAQNPLDADNLTRWGGALLELSQFQPVAESKQMISDATSKLEEALTVNPEKHDALWCLGNAHTSHAFLTPDMDEAKVYFEKATQCFQQAFDADPSNDLYRKSLEVTAKAPELHMEIHRHGPMQQPMAAEPSTSTSTKSSKKKKSSDLKYDIFGWVILAVGIVAWVGFAKSNMPPPPPPHPQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="27885" PGL_stop="25262"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="27885" e_stop="27388"/>
            <exon e_start="26056" e_stop="25262"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.980" acc_prob="0.662" e_score="0.998"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="27885" e_stop="27388" e_length="498"/>
          </exon>
          <intron i_serial="1" don_prob="0.980" acc_prob="0.662">
            <gDNA_intron_boundary i_start="27387" i_stop="26057" i_length="1331"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="26056" e_stop="25262" e_length="795"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27885" stop="27388"/>
              <exon start="26056" stop="25698"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738464" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25763" stop="25262"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277343" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTTAGCTTATACCTAGCTGTGCTCATCTGATCTCTTCTCATCAAAAAAAGAGAGTAATCAAACGCAACGTATCCCCACACAGCCCAACTTCATTCATTGATAAAACAAGAATTTTGAAGTTGAAGATATAAAAAATCTGAAGCTCTCGATCTGAATCCATGACAATTTATTTGAAACAAAGATTTGGCTATTTTTTTCATAACAGATGGCTGGTGTTCGTTGCTGCAATGTGGATTCAAACTTGTGCGGGACTTGGATACTTATTCGGCAGTATTTCTCCAGTAATTAAAATCTCTCTGAATTACAATCAGAAACAGATTGCTCGATTGGGCGTGGCTAAAGATTTGGGTGATAGTGTTGGATTTTTAGCTGCTACTTTGTGTGAAATTTTGCCTTTATGGGCTGCACTTCTTGTGGGTGCTATTCAGAATTTTATTGGATATGGTTGGCTTTGGCTTATTGTGACTCGAAGAACTGAACCTTTGCCATTATGGGCT : ATGTGTATTCTTATATTTATAGGAACAAATGGTGAAACCTACTTCAACACAGCAGCTTTAGTCTCTTGTGTACAAAATTTCCCGAAAAGTCGCGGTCCTGTGGTTGGGATTCTTAAGGGATTTGCTGGCTTAGGTGGTGCTATCATAACTCAGATATATGCAGTAATTCATTCCCCGGATCACGCTTCACTTATATTTGTGATTGCGGTTGGACCAGCAATGGTGATTATAGCTCTCATGTTTATAATCAGGCCTGTTGGAGGCCATAGACAAGTCAGGCCTTCTGATGGTTTAAGTTTTTCGTTTGTTTACAGTATATGCCTCATTTTAGCTTCTTACTTATTGGGAGTTATGATTGTTGAAGACTTAGTCGATGTTAGCCAAAATGCTATTATTATCCTCACATCTATTCTATTTGTCATCTTGATTATCCCTATTGTGATCCCTATCTATTTGAGTTTCACTCAAGAGCCAAGAGTAGTACCAGAAGAAGAGGCACTTGTATCTCGGTCAGGTGATCAAGGTCCTGGCAGATCAGAACACTACGATGGTCAAGAAATTATATTTAGTGAGGTTGAAGAAGAGAAACCAAAGGGAGTAGACTTGCTTCCTGCTTTAGAAAGGCAGAAAAGGATCGCGCAGTTACAAGTGAGACTAGCACAAGCAGCTGCAGAAGGAGCTGTGAGGGTGAAAAGGAGACGAGGTCCTCGTAGGGGAGAGGACTTTACTTTAGTCCAGGCTTTAATAAAAGCAGATTTCTGGCTTATGTTTTTCTCACTGCTTTTCGGTTCTGGA</gDNA_template>
            <first_frame> L  *  L  I  P  S  C  A  H  L  I  S  S  H  Q  K  K  R  V  I  K  R  N  V  S  P  H  S  P  T  S  F  I  D  K  T  R  I  L  K  L  K  I  *  K  I  *  S  S  R  S  E  S  M  T  I  Y  L  K  Q  R  F  G  Y  F  F  H  N  R  W  L  V  F  V  A  A  M  W  I  Q  T  C  A  G  L  G  Y  L  F  G  S  I  S  P  V  I  K  I  S  L  N  Y  N  Q  K  Q  I  A  R  L  G  V  A  K  D  L  G  D  S  V  G  F  L  A  A  T  L  C  E  I  L  P  L  W  A  A  L  L  V  G  A  I  Q  N  F  I  G  Y  G  W  L  W  L  I  V  T  R  R  T  E  P  L  P  L  W  A  :  M  C  I  L  I  F  I  G  T  N  G  E  T  Y  F  N  T  A  A  L  V  S  C  V  Q  N  F  P  K  S  R  G  P  V  V  G  I  L  K  G  F  A  G  L  G  G  A  I  I  T  Q  I  Y  A  V  I  H  S  P  D  H  A  S  L  I  F  V  I  A  V  G  P  A  M  V  I  I  A  L  M  F  I  I  R  P  V  G  G  H  R  Q  V  R  P  S  D  G  L  S  F  S  F  V  Y  S  I  C  L  I  L  A  S  Y  L  L  G  V  M  I  V  E  D  L  V  D  V  S  Q  N  A  I  I  I  L  T  S  I  L  F  V  I  L  I  I  P  I  V  I  P  I  Y  L  S  F  T  Q  E  P  R  V  V  P  E  E  E  A  L  V  S  R  S  G  D  Q  G  P  G  R  S  E  H  Y  D  G  Q  E  I  I  F  S  E  V  E  E  E  K  P  K  G  V  D  L  L  P  A  L  E  R  Q  K  R  I  A  Q  L  Q  V  R  L  A  Q  A  A  A  E  G  A  V  R  V  K  R  R  R  G  P  R  R  G  E  D  F  T  L  V  Q  A  L  I  K  A  D  F  W  L  M  F  F  S  L  L  F  G  S  G </first_frame>
            <second_frame>  F  S  L  Y  L  A  V  L  I  *  S  L  L  I  K  K  R  E  *  S  N  A  T  Y  P  H  T  A  Q  L  H  S  L  I  K  Q  E  F  *  S  *  R  Y  K  K  S  E  A  L  D  L  N  P  *  Q  F  I  *  N  K  D  L  A  I  F  F  I  T  D  G  W  C  S  L  L  Q  C  G  F  K  L  V  R  D  L  D  T  Y  S  A  V  F  L  Q  *  L  K  S  L  *  I  T  I  R  N  R  L  L  D  W  A  W  L  K  I  W  V  I  V  L  D  F  *  L  L  L  C  V  K  F  C  L  Y  G  L  H  F  L  W  V  L  F  R  I  L  L  D  M  V  G  F  G  L  L  *  L  E  E  L  N  L  C  H  Y  G  L :   C  V  F  L  Y  L  *  E  Q  M  V  K  P  T  S  T  Q  Q  L  *  S  L  V  Y  K  I  S  R  K  V  A  V  L  W  L  G  F  L  R  D  L  L  A  *  V  V  L  S  *  L  R  Y  M  Q  *  F  I  P  R  I  T  L  H  L  Y  L  *  L  R  L  D  Q  Q  W  *  L  *  L  S  C  L  *  S  G  L  L  E  A  I  D  K  S  G  L  L  M  V  *  V  F  R  L  F  T  V  Y  A  S  F  *  L  L  T  Y  W  E  L  *  L  L  K  T  *  S  M  L  A  K  M  L  L  L  S  S  H  L  F  Y  L  S  S  *  L  S  L  L  *  S  L  S  I  *  V  S  L  K  S  Q  E  *  Y  Q  K  K  R  H  L  Y  L  G  Q  V  I  K  V  L  A  D  Q  N  T  T  M  V  K  K  L  Y  L  V  R  L  K  K  R  N  Q  R  E  *  T  C  F  L  L  *  K  G  R  K  G  S  R  S  Y  K  *  D  *  H  K  Q  L  Q  K  E  L  *  G  *  K  G  D  E  V  L  V  G  E  R  T  L  L  *  S  R  L  *  *  K  Q  I  S  G  L  C  F  S  H  C  F  S  V  L   </second_frame>
            <third_frame>   L  A  Y  T  *  L  C  S  S  D  L  F  S  S  K  K  E  S  N  Q  T  Q  R  I  P  T  Q  P  N  F  I  H  *  *  N  K  N  F  E  V  E  D  I  K  N  L  K  L  S  I  *  I  H  D  N  L  F  E  T  K  I  W  L  F  F  S  *  Q  M  A  G  V  R  C  C  N  V  D  S  N  L  C  G  T  W  I  L  I  R  Q  Y  F  S  S  N  *  N  L  S  E  L  Q  S  E  T  D  C  S  I  G  R  G  *  R  F  G  *  *  C  W  I  F  S  C  Y  F  V  *  N  F  A  F  M  G  C  T  S  C  G  C  Y  S  E  F  Y  W  I  W  L  A  L  A  Y  C  D  S  K  N  *  T  F  A  I  M  G   : Y  V  Y  S  Y  I  Y  R  N  K  W  *  N  L  L  Q  H  S  S  F  S  L  L  C  T  K  F  P  E  K  S  R  S  C  G  W  D  S  *  G  I  C  W  L  R  W  C  Y  H  N  S  D  I  C  S  N  S  F  P  G  S  R  F  T  Y  I  C  D  C  G  W  T  S  N  G  D  Y  S  S  H  V  Y  N  Q  A  C  W  R  P  *  T  S  Q  A  F  *  W  F  K  F  F  V  C  L  Q  Y  M  P  H  F  S  F  L  L  I  G  S  Y  D  C  *  R  L  S  R  C  *  P  K  C  Y  Y  Y  P  H  I  Y  S  I  C  H  L  D  Y  P  Y  C  D  P  Y  L  F  E  F  H  S  R  A  K  S  S  T  R  R  R  G  T  C  I  S  V  R  *  S  R  S  W  Q  I  R  T  L  R  W  S  R  N  Y  I  *  *  G  *  R  R  E  T  K  G  S  R  L  A  S  C  F  R  K  A  E  K  D  R  A  V  T  S  E  T  S  T  S  S  C  R  R  S  C  E  G  E  K  E  T  R  S  S  *  G  R  G  L  Y  F  S  P  G  F  N  K  S  R  F  L  A  Y  V  F  L  T  A  F  R  F  W  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="27744" stop="27388"/>
                    <exon start="26056" stop="25262"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1152</number_coding_nucleotides>
                  <number_encoded_amino_acids>384</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSRSESMTIYLKQRFGYFFHNRWLVFVAAMWIQTCAGLGYLFGSISPVIKISLNYNQKQIARLGVAKDLGDSVGFLAATLCEILPLWAALLVGAIQNFIGYGWLWLIVTRRTEPLPLWAMCILIFIGTNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAIITQIYAVIHSPDHASLIFVIAVGPAMVIIALMFIIRPVGGHRQVRPSDGLSFSFVYSICLILASYLLGVMIVEDLVDVSQNAIIILTSILFVILIIPIVIPIYLSFTQEPRVVPEEEALVSRSGDQGPGRSEHYDGQEIIFSEVEEEKPKGVDLLPALERQKRIAQLQVRLAQAAAEGAVRVKRRRGPRRGEDFTLVQALIKADFWLMFFSLLFGSG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="28339" PGL_stop="29103"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28339" e_stop="29103"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.973"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.973">
            <gDNA_exon_boundary e_start="28339" e_stop="29103" e_length="765"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28339" stop="29103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E689229" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28339" stop="28905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325909" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACACGTTATCAGCACGAAGTTGCTACTTGCAAAGGTATTATATATAAATATTTTTATTTGATTCACATATTCTCTCATAATTTCATTATGTCGAATTTATCCAAACTTGAGTTTGTGGCATTAGATATTTCTGGAAAGAATTATCTTTCATGGGTACTCGATGCTGAGATTCACTTGGCTGCTAAAGGTCTTGATGCCACTATTACTCAGGGAAATGAAGCATCGAGTCAAGATAAGGCGAAAGCTATGATTTTCCTTCGTCATCATCTTGATGAGGGCCTGAAGATTGAATATCTGACGGTGAAAGATCCACTTGAATTGTGGACTGATTTAAAGGGGAGATATGACCACCTAAAGGCAACAGTGTTGCCAAGAGCTCGTTATGAGTGGATGCATTTACGGTTTCAAGATTTTAAGACCGTAATTGAATACAACTCTGCTGTATTCAGGATAACCTCCCAGTTAAAATTATGTGGGGAGACTATAAAAGATGAGGACATGTTGGAAAAGACACTTACTACTTTCCATGCCTCAAATGTGATATTGCAGCAACAATATCATGAAAAGGGTTTTCAGAAATATTCTGAACTAATTTCATGTCTTTTGGTGGCTGAGCAACATAATGCTCTTTTAATGAAAAATCATGAAGCTCGTCCCACTGGAGCTGCTCCATTATCGGAGGCAAATGTAGTGGAAGCACGTGATCAATCTGAAGTAAAAAGAGATGATCATCGGGGCTATAATAATGCACGGGGACGTGACAA</gDNA_template>
            <first_frame> N  T  L  S  A  R  S  C  Y  L  Q  R  Y  Y  I  *  I  F  L  F  D  S  H  I  L  S  *  F  H  Y  V  E  F  I  Q  T  *  V  C  G  I  R  Y  F  W  K  E  L  S  F  M  G  T  R  C  *  D  S  L  G  C  *  R  S  *  C  H  Y  Y  S  G  K  *  S  I  E  S  R  *  G  E  S  Y  D  F  P  S  S  S  S  *  *  G  P  E  D  *  I  S  D  G  E  R  S  T  *  I  V  D  *  F  K  G  E  I  *  P  P  K  G  N  S  V  A  K  S  S  L  *  V  D  A  F  T  V  S  R  F  *  D  R  N  *  I  Q  L  C  C  I  Q  D  N  L  P  V  K  I  M  W  G  D  Y  K  R  *  G  H  V  G  K  D  T  Y  Y  F  P  C  L  K  C  D  I  A  A  T  I  S  *  K  G  F  S  E  I  F  *  T  N  F  M  S  F  G  G  *  A  T  *  C  S  F  N  E  K  S  *  S  S  S  H  W  S  C  S  I  I  G  G  K  C  S  G  S  T  *  S  I  *  S  K  K  R  *  S  S  G  L  *  *  C  T  G  T  *  Q </first_frame>
            <second_frame>  T  R  Y  Q  H  E  V  A  T  C  K  G  I  I  Y  K  Y  F  Y  L  I  H  I  F  S  H  N  F  I  M  S  N  L  S  K  L  E  F  V  A  L  D  I  S  G  K  N  Y  L  S  W  V  L  D  A  E  I  H  L  A  A  K  G  L  D  A  T  I  T  Q  G  N  E  A  S  S  Q  D  K  A  K  A  M  I  F  L  R  H  H  L  D  E  G  L  K  I  E  Y  L  T  V  K  D  P  L  E  L  W  T  D  L  K  G  R  Y  D  H  L  K  A  T  V  L  P  R  A  R  Y  E  W  M  H  L  R  F  Q  D  F  K  T  V  I  E  Y  N  S  A  V  F  R  I  T  S  Q  L  K  L  C  G  E  T  I  K  D  E  D  M  L  E  K  T  L  T  T  F  H  A  S  N  V  I  L  Q  Q  Q  Y  H  E  K  G  F  Q  K  Y  S  E  L  I  S  C  L  L  V  A  E  Q  H  N  A  L  L  M  K  N  H  E  A  R  P  T  G  A  A  P  L  S  E  A  N  V  V  E  A  R  D  Q  S  E  V  K  R  D  D  H  R  G  Y  N  N  A  R  G  R  D   </second_frame>
            <third_frame>   H  V  I  S  T  K  L  L  L  A  K  V  L  Y  I  N  I  F  I  *  F  T  Y  S  L  I  I  S  L  C  R  I  Y  P  N  L  S  L  W  H  *  I  F  L  E  R  I  I  F  H  G  Y  S  M  L  R  F  T  W  L  L  K  V  L  M  P  L  L  L  R  E  M  K  H  R  V  K  I  R  R  K  L  *  F  S  F  V  I  I  L  M  R  A  *  R  L  N  I  *  R  *  K  I  H  L  N  C  G  L  I  *  R  G  D  M  T  T  *  R  Q  Q  C  C  Q  E  L  V  M  S  G  C  I  Y  G  F  K  I  L  R  P  *  L  N  T  T  L  L  Y  S  G  *  P  P  S  *  N  Y  V  G  R  L  *  K  M  R  T  C  W  K  R  H  L  L  L  S  M  P  Q  M  *  Y  C  S  N  N  I  M  K  R  V  F  R  N  I  L  N  *  F  H  V  F  W  W  L  S  N  I  M  L  F  *  *  K  I  M  K  L  V  P  L  E  L  L  H  Y  R  R  Q  M  *  W  K  H  V  I  N  L  K  *  K  E  M  I  I  G  A  I  I  M  H  G  D  V  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28340" stop="29101"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>762</number_coding_nucleotides>
                  <number_encoded_amino_acids>254</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TRYQHEVATCKGIIYKYFYLIHIFSHNFIMSNLSKLEFVALDISGKNYLSWVLDAEIHLAAKGLDATITQGNEASSQDKAKAMIFLRHHLDEGLKIEYLTVKDPLELWTDLKGRYDHLKATVLPRARYEWMHLRFQDFKTVIEYNSAVFRITSQLKLCGETIKDEDMLEKTLTTFHASNVILQQQYHEKGFQKYSELISCLLVAEQHNALLMKNHEARPTGAAPLSEANVVEARDQSEVKRDDHRGYNNARGRD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="29638" PGL_stop="30183"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29638" e_stop="30183"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.901"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.901">
            <gDNA_exon_boundary e_start="29638" e_stop="30183" e_length="546"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29638" stop="30183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206250" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29748" stop="30116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332350" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAATCCCCAGTTGACAGTTGGATTCAAGATGAGTAATGGAGATGTATGCCTTCTTGATAATGCTACAACGCATACAATATTAAAAGAAAAGAAATACTTTTCTAATTTGGTTATGAAAATGGCATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGCATTTTCTTCTGGGTTGTACTATACAAGTATAAGTATAGTTGAATCACATGCCATAGTAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATGACCGGTTGGGCCATCCTGGATTTAATATGATGCGCAAAATCATTGAGAATTCACATGGACACACCTT</gDNA_template>
            <first_frame> K  S  P  V  D  S  W  I  Q  D  E  *  W  R  C  M  P  S  *  *  C  Y  N  A  Y  N  I  K  R  K  E  I  L  F  *  F  G  Y  E  N  G  I  C  Q  H  N  I  R  *  Y  K  I  N  *  G  L  W  K  S  D  L  I  T  T  W  R  D  N  I  K  H  *  *  C  I  I  L  *  *  V  S  K  K  L  I  K  F  Q  S  Y  S  P  K  W  L  S  C  *  D  G  *  *  R  K  G  *  I  P  L  H  Y  Y  N  *  C  *  E  E  N  C  A  *  K  I  T  C  I  F  F  W  V  V  L  Y  K  Y  K  Y  S  *  I  T  C  H  S  K  Q  K  V  Y  *  F  *  *  F  Y  H  L  A  *  P  V  G  P  S  W  I  *  Y  D  A  Q  N  H  *  E  F  T  W  T  H  L </first_frame>
            <second_frame>  N  P  Q  L  T  V  G  F  K  M  S  N  G  D  V  C  L  L  D  N  A  T  T  H  T  I  L  K  E  K  K  Y  F  S  N  L  V  M  K  M  A  Y  V  N  T  I  S  G  S  T  K  L  I  E  G  S  G  R  A  T  L  L  L  P  G  G  T  I  L  S  I  D  N  A  L  Y  C  S  K  S  Q  R  N  L  L  S  F  K  V  I  R  Q  N  G  Y  H  V  E  T  A  N  E  G  K  V  E  Y  L  Y  I  T  T  I  N  V  E  K  K  I  V  H  E  K  L  P  A  F  S  S  G  L  Y  Y  T  S  I  S  I  V  E  S  H  A  I  V  N  K  R  F  T  N  F  N  D  F  I  I  W  H  D  R  L  G  H  P  G  F  N  M  M  R  K  I  I  E  N  S  H  G  H  T   </second_frame>
            <third_frame>   I  P  S  *  Q  L  D  S  R  *  V  M  E  M  Y  A  F  L  I  M  L  Q  R  I  Q  Y  *  K  K  R  N  T  F  L  I  W  L  *  K  W  H  M  S  T  Q  Y  Q  V  V  Q  N  *  L  R  A  L  E  E  R  P  Y  Y  Y  L  E  G  Q  Y  *  A  L  I  M  H  Y  I  V  V  S  L  K  E  T  Y  *  V  S  K  L  F  A  K  M  A  I  M  L  R  R  L  M  K  E  R  L  N  T  F  T  L  L  Q  L  M  L  R  R  K  L  C  M  K  N  Y  L  H  F  L  L  G  C  T  I  Q  V  *  V  *  L  N  H  M  P  *  *  T  K  G  L  L  I  L  M  I  L  S  F  G  M  T  G  W  A  I  L  D  L  I  *  C  A  K  S  L  R  I  H  M  D  T  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29639" stop="30181"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>543</number_coding_nucleotides>
                  <number_encoded_amino_acids>181</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NPQLTVGFKMSNGDVCLLDNATTHTILKEKKYFSNLVMKMAYVNTISGSTKLIEGSGRATLLLPGGTILSIDNALYCSKSQRNLLSFKVIRQNGYHVETANEGKVEYLYITTINVEKKIVHEKLPAFSSGLYYTSISIVESHAIVNKRFTNFNDFIIWHDRLGHPGFNMMRKIIENSHGHT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="31502" PGL_stop="32215"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="31502" e_stop="32215"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.962"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.962">
            <gDNA_exon_boundary e_start="31502" e_stop="32215" e_length="714"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31502" stop="32215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331947" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAATAATGCAACAAGATGAAGTTTTTGAGCCAAAATCTGTTCACGAATGTAGACAGAGAAATGATTGGCCAAAATGGAAGGATGCAATTCAAGCTGAATTGGCTTCACTAGAAAAACGTGAAGTTTTTGGACCAATAATCCGAACACCTGAAGGTATCAAGCCAGTGGGGTACAAATGGGTTTTTGTACGAAAAAAGAAATGAGAAAGGTGAAGTCATGAGATATAAGGCCCGACTCGTTGCTCAAGGTTTTTCTCAAAGACCTGGCATTGATTATATGGAGACATATTCTCCAGTGGTAGATGCAATCACCTTTAGATATCTCATAAATCTGGCAGTTCATGAAAAACTTGAAATGCGTCTAATGGACGTTGTCACAGCCTATCTATATGGCTCATTGGACCACAACATTTTCATGAAAATTCCTGAAGCATTTAAAGTGCCTGAAACATACAAAGATTCAAGAGAAACTTGTTCAATAAAGCTTCAGAAATCTCTGTATGGACTGAAATAATCAGGAAGGATGTGGTACAATCGTTTGAGTGAATATTTGTTAAAGAAAGGGTACAAAAATGACCCGATTTGTCCCTGCATTTTCAGTAAATGGTTGGGGTCTGAATTTGTAATAATAGCTGTGTATGTTGATGATTTGAACATCATTGGAACTCGTAAAGAGCTTTTAGAAGCTGTTGAGTGTCTGAAAAGACAAAATTTT</gDNA_template>
            <first_frame> K  *  C  N  K  M  K  F  L  S  Q  N  L  F  T  N  V  D  R  E  M  I  G  Q  N  G  R  M  Q  F  K  L  N  W  L  H  *  K  N  V  K  F  L  D  Q  *  S  E  H  L  K  V  S  S  Q  W  G  T  N  G  F  L  Y  E  K  R  N  E  K  G  E  V  M  R  Y  K  A  R  L  V  A  Q  G  F  S  Q  R  P  G  I  D  Y  M  E  T  Y  S  P  V  V  D  A  I  T  F  R  Y  L  I  N  L  A  V  H  E  K  L  E  M  R  L  M  D  V  V  T  A  Y  L  Y  G  S  L  D  H  N  I  F  M  K  I  P  E  A  F  K  V  P  E  T  Y  K  D  S  R  E  T  C  S  I  K  L  Q  K  S  L  Y  G  L  K  *  S  G  R  M  W  Y  N  R  L  S  E  Y  L  L  K  K  G  Y  K  N  D  P  I  C  P  C  I  F  S  K  W  L  G  S  E  F  V  I  I  A  V  Y  V  D  D  L  N  I  I  G  T  R  K  E  L  L  E  A  V  E  C  L  K  R  Q  N  F </first_frame>
            <second_frame>  N  N  A  T  R  *  S  F  *  A  K  I  C  S  R  M  *  T  E  K  *  L  A  K  M  E  G  C  N  S  S  *  I  G  F  T  R  K  T  *  S  F  W  T  N  N  P  N  T  *  R  Y  Q  A  S  G  V  Q  M  G  F  C  T  K  K  E  M  R  K  V  K  S  *  D  I  R  P  D  S  L  L  K  V  F  L  K  D  L  A  L  I  I  W  R  H  I  L  Q  W  *  M  Q  S  P  L  D  I  S  *  I  W  Q  F  M  K  N  L  K  C  V  *  W  T  L  S  Q  P  I  Y  M  A  H  W  T  T  T  F  S  *  K  F  L  K  H  L  K  C  L  K  H  T  K  I  Q  E  K  L  V  Q  *  S  F  R  N  L  C  M  D  *  N  N  Q  E  G  C  G  T  I  V  *  V  N  I  C  *  R  K  G  T  K  M  T  R  F  V  P  A  F  S  V  N  G  W  G  L  N  L  *  *  *  L  C  M  L  M  I  *  T  S  L  E  L  V  K  S  F  *  K  L  L  S  V  *  K  D  K  I   </second_frame>
            <third_frame>   I  M  Q  Q  D  E  V  F  E  P  K  S  V  H  E  C  R  Q  R  N  D  W  P  K  W  K  D  A  I  Q  A  E  L  A  S  L  E  K  R  E  V  F  G  P  I  I  R  T  P  E  G  I  K  P  V  G  Y  K  W  V  F  V  R  K  K  K  *  E  R  *  S  H  E  I  *  G  P  T  R  C  S  R  F  F  S  K  T  W  H  *  L  Y  G  D  I  F  S  S  G  R  C  N  H  L  *  I  S  H  K  S  G  S  S  *  K  T  *  N  A  S  N  G  R  C  H  S  L  S  I  W  L  I  G  P  Q  H  F  H  E  N  S  *  S  I  *  S  A  *  N  I  Q  R  F  K  R  N  L  F  N  K  A  S  E  I  S  V  W  T  E  I  I  R  K  D  V  V  Q  S  F  E  *  I  F  V  K  E  R  V  Q  K  *  P  D  L  S  L  H  F  Q  *  M  V  G  V  *  I  C  N  N  S  C  V  C  *  *  F  E  H  H  W  N  S  *  R  A  F  R  S  C  *  V  S  E  K  T  K  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31640" stop="32014"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>372</number_coding_nucleotides>
                  <number_encoded_amino_acids>124</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SEHLKVSSQWGTNGFLYEKRNEKGEVMRYKARLVAQGFSQRPGIDYMETYSPVVDAITFRYLINLAVHEKLEMRLMDVVTAYLYGSLDHNIFMKIPEAFKVPETYKDSRETCSIKLQKSLYGLK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32015" stop="32215"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SGRMWYNRLSEYLLKKGYKNDPICPCIFSKWLGSEFVIIAVYVDDLNIIGTRKELLEAVECLKRQNF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="32306" PGL_stop="33204"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="32306" e_stop="33204"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="32306" e_stop="33204" e_length="899"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32306" stop="33070"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211563" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32333" stop="32904"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201786" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32637" stop="33036"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200850" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32824" stop="33204"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351886" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATAACTCACATCCATTGAGTACTCCAATGGTGGTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCAATCGGGGCACTAATGTACCTTGCTAACAATACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAATTGATTGGTTACGCAGATGCAGGGTATTTATCAGATCAGCATAAAGCTCGATCACAAACAGGCTATTTGTTTACATGTGGAGACACGGCAATATCTTGGCGATCAATGAAGCAAACATTGGTAGCCACTTCTTCAAATCATGCAGAAATAATAGCCATCCATGAAGCAAGTCGAGAGTGCGTCTGGTTGAGATCAATGACCCATCATATTCAGAAAAATGTGTGGTTTTTCTTTGAAAAAGAATATACCAACCACAATGTATGAAGATAATGCTGCATGTATAGCTCAATTGAAAGGAGGATACATCAAAGGAGACCAGACAAAGCATATCTCACCAAAGTTCTTTTTCACGCATGATCTTCAACAAAATGGTGAGATAGAAGTTCAACAAATTCGTTCAAGTGATAATCTTGCTGATTTATTCACTAAGGCATTGCCAACATCAACATTTGAGAAGTTGAGATACAAGATTGGAATGCGCCGTCTCCGAGATATCAAGTAAAGTTTTCATCAGGGGGAGCGAAATACGCGTTGTACTCTTTTCCTTAACTATGGTTTTGTCCCAAGTTGGGTTTTCCTGGTAAGGTTTTTAAT</gDNA_template>
            <first_frame> I  T  H  I  H  *  V  L  Q  W  W  *  D  R  L  T  S  I  Q  I  H  F  D  L  K  R  M  M  K  S  F  L  V  M  K  L  L  I  L  V  Q  S  G  H  *  C  T  L  L  T  I  L  D  Q  I  S  V  L  Q  *  V  Y  W  Q  D  S  V  P  P  Q  Q  K  D  I  G  M  V  L  N  T  Y  F  D  I  F  E  G  P  W  T  W  V  Y  S  I  P  M  N  P  N  Q  N  *  L  V  T  Q  M  Q  G  I  Y  Q  I  S  I  K  L  D  H  K  Q  A  I  C  L  H  V  E  T  R  Q  Y  L  G  D  Q  *  S  K  H  W  *  P  L  L  Q  I  M  Q  K  *  *  P  S  M  K  Q  V  E  S  A  S  G  *  D  Q  *  P  I  I  F  R  K  M  C  G  F  S  L  K  K  N  I  P  T  T  M  Y  E  D  N  A  A  C  I  A  Q  L  K  G  G  Y  I  K  G  D  Q  T  K  H  I  S  P  K  F  F  F  T  H  D  L  Q  Q  N  G  E  I  E  V  Q  Q  I  R  S  S  D  N  L  A  D  L  F  T  K  A  L  P  T  S  T  F  E  K  L  R  Y  K  I  G  M  R  R  L  R  D  I  K  *  S  F  H  Q  G  E  R  N  T  R  C  T  L  F  L  N  Y  G  F  V  P  S  W  V  F  L  V  R  F  L   </first_frame>
            <second_frame>  *  L  T  S  I  E  Y  S  N  G  G  K  I  A  *  H  Q  Y  R  S  I  S  T  S  R  E  *  *  R  A  S  W  *  *  N  S  L  S  *  C  N  R  G  T  N  V  P  C  *  Q  Y  S  T  R  Y  L  F  C  S  K  S  T  G  K  I  Q  F  L  P  N  K  K  T  L  E  W  C  *  T  H  T  S  I  S  S  R  D  H  G  H  G  F  I  L  F  Q  *  I  Q  I  R  I  D  W  L  R  R  C  R  V  F  I  R  S  A  *  S  S  I  T  N  R  L  F  V  Y  M  W  R  H  G  N  I  L  A  I  N  E  A  N  I  G  S  H  F  F  K  S  C  R  N  N  S  H  P  *  S  K  S  R  V  R  L  V  E  I  N  D  P  S  Y  S  E  K  C  V  V  F  L  *  K  R  I  Y  Q  P  Q  C  M  K  I  M  L  H  V  *  L  N  *  K  E  D  T  S  K  E  T  R  Q  S  I  S  H  Q  S  S  F  S  R  M  I  F  N  K  M  V  R  *  K  F  N  K  F  V  Q  V  I  I  L  L  I  Y  S  L  R  H  C  Q  H  Q  H  L  R  S  *  D  T  R  L  E  C  A  V  S  E  I  S  S  K  V  F  I  R  G  S  E  I  R  V  V  L  F  S  L  T  M  V  L  S  Q  V  G  F  S  W  *  G  F  *  </second_frame>
            <third_frame>   N  S  H  P  L  S  T  P  M  V  V  R  S  L  D  I  N  T  D  P  F  R  P  Q  E  N  D  E  E  L  L  G  D  E  T  P  Y  L  S  A  I  G  A  L  M  Y  L  A  N  N  T  R  P  D  I  C  F  A  V  S  L  L  A  R  F  S  S  S  P  T  K  R  H  W  N  G  V  K  H  I  L  R  Y  L  R  G  T  M  D  M  G  L  F  Y  S  N  E  S  K  S  E  L  I  G  Y  A  D  A  G  Y  L  S  D  Q  H  K  A  R  S  Q  T  G  Y  L  F  T  C  G  D  T  A  I  S  W  R  S  M  K  Q  T  L  V  A  T  S  S  N  H  A  E  I  I  A  I  H  E  A  S  R  E  C  V  W  L  R  S  M  T  H  H  I  Q  K  N  V  W  F  F  F  E  K  E  Y  T  N  H  N  V  *  R  *  C  C  M  Y  S  S  I  E  R  R  I  H  Q  R  R  P  D  K  A  Y  L  T  K  V  L  F  H  A  *  S  S  T  K  W  *  D  R  S  S  T  N  S  F  K  *  *  S  C  *  F  I  H  *  G  I  A  N  I  N  I  *  E  V  E  I  Q  D  W  N  A  P  S  P  R  Y  Q  V  K  F  S  S  G  G  A  K  Y  A  L  Y  S  F  P  *  L  W  F  C  P  K  L  G  F  P  G  K  V  F  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32308" stop="32874"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>564</number_coding_nucleotides>
                  <number_encoded_amino_acids>188</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSHPLSTPMVVRSLDINTDPFRPQENDEELLGDETPYLSAIGALMYLANNTRPDICFAVSLLARFSSSPTKRHWNGVKHILRYLRGTMDMGLFYSNESKSELIGYADAGYLSDQHKARSQTGYLFTCGDTAISWRSMKQTLVATSSNHAEIIAIHEASRECVWLRSMTHHIQKNVWFFFEKEYTNHNV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="40072" PGL_stop="42778"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40072" e_stop="40503"/>
            <exon e_start="42470" e_stop="42778"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="40072" e_stop="40503" e_length="432"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.996">
            <gDNA_intron_boundary i_start="40504" i_stop="42469" i_length="1966"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="42470" e_stop="42778" e_length="309"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40072" stop="40503"/>
              <exon start="42470" stop="42752"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345424" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40148" stop="40503"/>
              <exon start="42470" stop="42725"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341804" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40152" stop="40503"/>
              <exon start="42470" stop="42778"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40161" stop="40503"/>
              <exon start="42470" stop="42739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716504" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40167" stop="40503"/>
              <exon start="42470" stop="42693"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311033" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATCAGCTCAGACAATAAGAGCGCGCGGCGCAGTCATAAAAAGGGCTCTTTCAATAGCCAGTAGCGTACTGTTGGACTTGAGTTGACACACGCAAATCAGAGTGAGAAGTAGAGCGACCGATTTTCCGATTTGCTAATGGATCCCGACGCCGTAGCGAAGGCATTTGTGGACTACTACTACACCACCTTCGATACCAATCGGGCTGGACTTGCTAGCGTCTACCAGGAAAGCTCTGTACTGTCTTTTGAGGGTCAGAAGTATCAGGGGACTCAAAGTATCTCCGGTAAGCTCACCGGTCTACCTTTCCAGCAGTGCAAGCACCAGATCAACACCGTTGATTGTCAGCCCTCTGGTGCTGCCGGGGGAATGCTTGTCTTTGTCAGCGGCAATCTCAGCCTTCCAGGCGAACAACACACCCTCAAGTTCAGTCAG : ATGTTTCACTTGATTCCAACACAAGGAGGAAGTTTCTACGTGCAGAATGACATATTTCGCTTGAACTATGCTTGAAGGGTTCTGCGTTCAATTATCTCCTGGTCATATTTTCTTGATTGATTCGACAAAGATAGTATTATAGCAAGATATTGCTTCCATTTCACAGTCATTGAGAGACTATTTTTTCCTGTAATGGTTTAGTGAATTGATTGATGAACTTGGCTTCCCTCAGAGTTTAATGGAATTGAACGAGGCTTTAAGAAGATTGTTATCAAAAAATGATTTCTTGCCAAAGCATTGGCACTTTCA</gDNA_template>
            <first_frame> I  S  S  D  N  K  S  A  R  R  S  H  K  K  G  S  F  N  S  Q  *  R  T  V  G  L  E  L  T  H  A  N  Q  S  E  K  *  S  D  R  F  S  D  L  L  M  D  P  D  A  V  A  K  A  F  V  D  Y  Y  Y  T  T  F  D  T  N  R  A  G  L  A  S  V  Y  Q  E  S  S  V  L  S  F  E  G  Q  K  Y  Q  G  T  Q  S  I  S  G  K  L  T  G  L  P  F  Q  Q  C  K  H  Q  I  N  T  V  D  C  Q  P  S  G  A  A  G  G  M  L  V  F  V  S  G  N  L  S  L  P  G  E  Q  H  T  L  K  F  S  Q  :  M  F  H  L  I  P  T  Q  G  G  S  F  Y  V  Q  N  D  I  F  R  L  N  Y  A  *  R  V  L  R  S  I  I  S  W  S  Y  F  L  D  *  F  D  K  D  S  I  I  A  R  Y  C  F  H  F  T  V  I  E  R  L  F  F  P  V  M  V  *  *  I  D  *  *  T  W  L  P  S  E  F  N  G  I  E  R  G  F  K  K  I  V  I  K  K  *  F  L  A  K  A  L  A  L  S </first_frame>
            <second_frame>  S  A  Q  T  I  R  A  R  G  A  V  I  K  R  A  L  S  I  A  S  S  V  L  L  D  L  S  *  H  T  Q  I  R  V  R  S  R  A  T  D  F  P  I  C  *  W  I  P  T  P  *  R  R  H  L  W  T  T  T  T  P  P  S  I  P  I  G  L  D  L  L  A  S  T  R  K  A  L  Y  C  L  L  R  V  R  S  I  R  G  L  K  V  S  P  V  S  S  P  V  Y  L  S  S  S  A  S  T  R  S  T  P  L  I  V  S  P  L  V  L  P  G  E  C  L  S  L  S  A  A  I  S  A  F  Q  A  N  N  T  P  S  S  S  V  R :   C  F  T  *  F  Q  H  K  E  E  V  S  T  C  R  M  T  Y  F  A  *  T  M  L  E  G  F  C  V  Q  L  S  P  G  H  I  F  L  I  D  S  T  K  I  V  L  *  Q  D  I  A  S  I  S  Q  S  L  R  D  Y  F  F  L  *  W  F  S  E  L  I  D  E  L  G  F  P  Q  S  L  M  E  L  N  E  A  L  R  R  L  L  S  K  N  D  F  L  P  K  H  W  H  F   </second_frame>
            <third_frame>   Q  L  R  Q  *  E  R  A  A  Q  S  *  K  G  L  F  Q  *  P  V  A  Y  C  W  T  *  V  D  T  R  K  S  E  *  E  V  E  R  P  I  F  R  F  A  N  G  S  R  R  R  S  E  G  I  C  G  L  L  L  H  H  L  R  Y  Q  S  G  W  T  C  *  R  L  P  G  K  L  C  T  V  F  *  G  S  E  V  S  G  D  S  K  Y  L  R  *  A  H  R  S  T  F  P  A  V  Q  A  P  D  Q  H  R  *  L  S  A  L  W  C  C  R  G  N  A  C  L  C  Q  R  Q  S  Q  P  S  R  R  T  T  H  P  Q  V  Q  S   : D  V  S  L  D  S  N  T  R  R  K  F  L  R  A  E  *  H  I  S  L  E  L  C  L  K  G  S  A  F  N  Y  L  L  V  I  F  S  *  L  I  R  Q  R  *  Y  Y  S  K  I  L  L  P  F  H  S  H  *  E  T  I  F  S  C  N  G  L  V  N  *  L  M  N  L  A  S  L  R  V  *  W  N  *  T  R  L  *  E  D  C  Y  Q  K  M  I  S  C  Q  S  I  G  T  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40183" stop="40503"/>
                    <exon start="42470" stop="42544"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>393</number_coding_nucleotides>
                  <number_encoded_amino_acids>131</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SDRFSDLLMDPDAVAKAFVDYYYTTFDTNRAGLASVYQESSVLSFEGQKYQGTQSISGKLTGLPFQQCKHQINTVDCQPSGAAGGMLVFVSGNLSLPGEQHTLKFSQMFHLIPTQGGSFYVQNDIFRLNYA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="52165" PGL_stop="59462"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52165" e_stop="52325"/>
            <exon e_start="52422" e_stop="52458"/>
            <exon e_start="53496" e_stop="53575"/>
            <exon e_start="53887" e_stop="53938"/>
            <exon e_start="54053" e_stop="54186"/>
            <exon e_start="54512" e_stop="54626"/>
            <exon e_start="54743" e_stop="54829"/>
            <exon e_start="54967" e_stop="55015"/>
            <exon e_start="56207" e_stop="56291"/>
            <exon e_start="57538" e_stop="57668"/>
            <exon e_start="59102" e_stop="59309"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.981" acc_prob="0.871" e_score="0.994"/>
          <exon-intron don_prob="0.960" acc_prob="0.782" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.885" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.867" acc_prob="0.845" e_score="1.000"/>
          <exon-intron don_prob="0.574" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.607" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.744" acc_prob="0.988" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="52165" e_stop="52325" e_length="161"/>
          </exon>
          <intron i_serial="1" don_prob="0.981" acc_prob="0.871">
            <gDNA_intron_boundary i_start="52326" i_stop="52421" i_length="96"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="52422" e_stop="52458" e_length="37"/>
          </exon>
          <intron i_serial="2" don_prob="0.960" acc_prob="0.782">
            <gDNA_intron_boundary i_start="52459" i_stop="53495" i_length="1037"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="53496" e_stop="53575" e_length="80"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.885">
            <gDNA_intron_boundary i_start="53576" i_stop="53886" i_length="311"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="53887" e_stop="53938" e_length="52"/>
          </exon>
          <intron i_serial="4" don_prob="0.969" acc_prob="0.972">
            <gDNA_intron_boundary i_start="53939" i_stop="54052" i_length="114"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="54053" e_stop="54186" e_length="134"/>
          </exon>
          <intron i_serial="5" don_prob="0.982" acc_prob="0.999">
            <gDNA_intron_boundary i_start="54187" i_stop="54511" i_length="325"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="54512" e_stop="54626" e_length="115"/>
          </exon>
          <intron i_serial="6" don_prob="0.867" acc_prob="0.845">
            <gDNA_intron_boundary i_start="54627" i_stop="54742" i_length="116"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="54743" e_stop="54829" e_length="87"/>
          </exon>
          <intron i_serial="7" don_prob="0.574" acc_prob="1.000">
            <gDNA_intron_boundary i_start="54830" i_stop="54966" i_length="137"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="54967" e_stop="55015" e_length="49"/>
          </exon>
          <intron i_serial="8" don_prob="0.994" acc_prob="0.607">
            <gDNA_intron_boundary i_start="55016" i_stop="56206" i_length="1191"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="56207" e_stop="56291" e_length="85"/>
          </exon>
          <intron i_serial="9" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="56292" i_stop="57537" i_length="1246"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="57538" e_stop="57668" e_length="131"/>
          </exon>
          <intron i_serial="10" don_prob="0.744" acc_prob="0.988">
            <gDNA_intron_boundary i_start="57669" i_stop="59101" i_length="1433"/>
          </intron>
          <exon e_serial="11" e_score="0.995">
            <gDNA_exon_boundary e_start="59102" e_stop="59309" e_length="208"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52165" stop="52325"/>
              <exon start="52422" stop="52458"/>
              <exon start="53496" stop="53575"/>
              <exon start="53887" stop="53938"/>
              <exon start="54053" stop="54186"/>
              <exon start="54512" stop="54626"/>
              <exon start="54743" stop="54829"/>
              <exon start="54967" stop="55015"/>
              <exon start="56207" stop="56291"/>
              <exon start="57538" stop="57668"/>
              <exon start="59102" stop="59309"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745580" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52187" stop="52325"/>
              <exon start="52422" stop="52458"/>
              <exon start="53496" stop="53575"/>
              <exon start="53887" stop="53938"/>
              <exon start="54053" stop="54186"/>
              <exon start="54512" stop="54626"/>
              <exon start="54743" stop="54829"/>
              <exon start="54967" stop="55015"/>
              <exon start="56207" stop="56291"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717803" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52221" stop="52325"/>
              <exon start="52422" stop="52458"/>
              <exon start="53496" stop="53575"/>
              <exon start="53887" stop="53938"/>
              <exon start="54053" stop="54186"/>
              <exon start="54512" stop="54626"/>
              <exon start="54743" stop="54829"/>
              <exon start="54967" stop="55015"/>
              <exon start="56207" stop="56276"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698428" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54971" stop="55015"/>
              <exon start="56207" stop="56291"/>
              <exon start="57538" stop="57668"/>
              <exon start="59102" stop="59253"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353597" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54971" stop="55015"/>
              <exon start="56207" stop="56291"/>
              <exon start="57538" stop="57668"/>
              <exon start="59102" stop="59252"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352934" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54974" stop="55015"/>
              <exon start="56207" stop="56291"/>
              <exon start="57538" stop="57668"/>
              <exon start="59102" stop="59253"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350453" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCCCTCAATTTTCTCTGGTTACATTTTTGTTCCGCAGGCTCTGAGATCAGAAAATGGGAAGCGTTCCACTTCCCTCGTCGTCTCTACTAATTTCCAGCTCCAGTTCCTCCATTTTTGGAAGATCATCATCGACAATTTCCTATCCTCACCGGCGATTCAG : AAAGGTGGATGTTTCCTGCGATTACTCTTGTTTCGAA : ATAAGGGATGTCTCTTATCGACCTCCAGGAACCAAGATCGATCTACTGAGTCAAGTCAACCTTTCCATCCCTGAGAAAAG : TTTTGGCTTGATATTTGGACGGAGTGGCAGTGGAAAAACTACTTTATTGCAG : CTGATTGCAGGGTTAAGCAAACCAACATCAGGTTCAATATATGTGCAAAGATATGGTGATGATGATCAACAGATTAAGTCTCCTGAACCCTTACAACCTGAAAGAGTTGGCATTGTTTTCCAATTTCCTGAGAG : ATACTTTGTTGCGGACACTGTTCTTGATGAAGTTACATTTGGGTGGCCAAGACAAAAGGGTGGCCTACAATTAAGAGAGCTTCTTGCTTCTAGACTTCAAAAGGCCATTATGTCG : GTTGGTCTAACAGGAATATCTTTGGATAAGGATCCCCATTCATTAAGCGGTGGTTACAAACGTCGGCTAGCCCTTGCTATTCAGTTA : GTTCAAACACCAGATTTATTAATATTGGATGAGCCTCTTGCTGGTCTTG : ATTGGAAGGCTCGTGCAGATGTGGCAAAATTGTTAAAAGATCTGAAGAAGGAGCTAACTTTACTTGTTGTCAGCCATGACCTCAA : GGAGTTGGCATCTTTGGTAGATCAATCCTGGAGGATGGAAATGGGAGGAGCACTTAAAAAAGAGCCTCTACCCATTTAATGCACTGAACTTATAATGTTCCCAACAATCATTTTCTGATGTAATATATGAG : GTTTTTATGAGCCTTGAATTGCATACAATTCTTGGAGAGGTGCTCAAGGTTATTGATTTTGCTTCAATCCCTGACCATCGAGGTCTTCACATTTCATGTAACCTCTGTAATGTAATTAACAGTTTCTGTAATGAGTTTTGAGATGGTTTCTAATTTTCTGTACACTTAGTTCGCCGTTTAAACTCTCATTAAAGTTTGATGGTCTGCA</gDNA_template>
            <first_frame> S  P  Q  F  S  L  V  T  F  L  F  R  R  L  *  D  Q  K  M  G  S  V  P  L  P  S  S  S  L  L  I  S  S  S  S  S  S  I  F  G  R  S  S  S  T  I  S  Y  P  H  R  R  F  R :   K  V  D  V  S  C  D  Y  S  C  F  E  :  I  R  D  V  S  Y  R  P  P  G  T  K  I  D  L  L  S  Q  V  N  L  S  I  P  E  K  S :   F  G  L  I  F  G  R  S  G  S  G  K  T  T  L  L  Q  :  L  I  A  G  L  S  K  P  T  S  G  S  I  Y  V  Q  R  Y  G  D  D  D  Q  Q  I  K  S  P  E  P  L  Q  P  E  R  V  G  I  V  F  Q  F  P  E  R :   Y  F  V  A  D  T  V  L  D  E  V  T  F  G  W  P  R  Q  K  G  G  L  Q  L  R  E  L  L  A  S  R  L  Q  K  A  I  M  S  :  V  G  L  T  G  I  S  L  D  K  D  P  H  S  L  S  G  G  Y  K  R  R  L  A  L  A  I  Q  L  :  V  Q  T  P  D  L  L  I  L  D  E  P  L  A  G  L   : D  W  K  A  R  A  D  V  A  K  L  L  K  D  L  K  K  E  L  T  L  L  V  V  S  H  D  L  K :   E  L  A  S  L  V  D  Q  S  W  R  M  E  M  G  G  A  L  K  K  E  P  L  P  I  *  C  T  E  L  I  M  F  P  T  I  I  F  *  C  N  I  *   : G  F  Y  E  P  *  I  A  Y  N  S  W  R  G  A  Q  G  Y  *  F  C  F  N  P  *  P  S  R  S  S  H  F  M  *  P  L  *  C  N  *  Q  F  L  *  *  V  L  R  W  F  L  I  F  C  T  L  S  S  P  F  K  L  S  L  K  F  D  G  L   </first_frame>
            <second_frame>  P  L  N  F  L  W  L  H  F  C  S  A  G  S  E  I  R  K  W  E  A  F  H  F  P  R  R  L  Y  *  F  P  A  P  V  P  P  F  L  E  D  H  H  R  Q  F  P  I  L  T  G  D  S   : E  R  W  M  F  P  A  I  T  L  V  S  K :   *  G  M  S  L  I  D  L  Q  E  P  R  S  I  Y  *  V  K  S  T  F  P  S  L  R  K   : V  L  A  *  Y  L  D  G  V  A  V  E  K  L  L  Y  C  S :   *  L  Q  G  *  A  N  Q  H  Q  V  Q  Y  M  C  K  D  M  V  M  M  I  N  R  L  S  L  L  N  P  Y  N  L  K  E  L  A  L  F  S  N  F  L  R   : D  T  L  L  R  T  L  F  L  M  K  L  H  L  G  G  Q  D  K  R  V  A  Y  N  *  E  S  F  L  L  L  D  F  K  R  P  L  C  R :   L  V  *  Q  E  Y  L  W  I  R  I  P  I  H  *  A  V  V  T  N  V  G  *  P  L  L  F  S  * :   F  K  H  Q  I  Y  *  Y  W  M  S  L  L  L  V  L  :  I  G  R  L  V  Q  M  W  Q  N  C  *  K  I  *  R  R  S  *  L  Y  L  L  S  A  M  T  S   : R  S  W  H  L  W  *  I  N  P  G  G  W  K  W  E  E  H  L  K  K  S  L  Y  P  F  N  A  L  N  L  *  C  S  Q  Q  S  F  S  D  V  I  Y  E  :  V  F  M  S  L  E  L  H  T  I  L  G  E  V  L  K  V  I  D  F  A  S  I  P  D  H  R  G  L  H  I  S  C  N  L  C  N  V  I  N  S  F  C  N  E  F  *  D  G  F  *  F  S  V  H  L  V  R  R  L  N  S  H  *  S  L  M  V  C  </second_frame>
            <third_frame>   P  S  I  F  S  G  Y  I  F  V  P  Q  A  L  R  S  E  N  G  K  R  S  T  S  L  V  V  S  T  N  F  Q  L  Q  F  L  H  F  W  K  I  I  I  D  N  F  L  S  S  P  A  I  Q  :  K  G  G  C  F  L  R  L  L  L  F  R   : N  K  G  C  L  L  S  T  S  R  N  Q  D  R  S  T  E  S  S  Q  P  F  H  P  *  E  K  :  F  W  L  D  I  W  T  E  W  Q  W  K  N  Y  F  I  A   : A  D  C  R  V  K  Q  T  N  I  R  F  N  I  C  A  K  I  W  *  *  *  S  T  D  *  V  S  *  T  L  T  T  *  K  S  W  H  C  F  P  I  S  *  E  :  I  L  C  C  G  H  C  S  *  *  S  Y  I  W  V  A  K  T  K  G  W  P  T  I  K  R  A  S  C  F  *  T  S  K  G  H  Y  V   : G  W  S  N  R  N  I  F  G  *  G  S  P  F  I  K  R  W  L  Q  T  S  A  S  P  C  Y  S  V   : S  S  N  T  R  F  I  N  I  G  *  A  S  C  W  S  * :   L  E  G  S  C  R  C  G  K  I  V  K  R  S  E  E  G  A  N  F  T  C  C  Q  P  *  P  Q  :  G  V  G  I  F  G  R  S  I  L  E  D  G  N  G  R  S  T  *  K  R  A  S  T  H  L  M  H  *  T  Y  N  V  P  N  N  H  F  L  M  *  Y  M  R :   F  L  *  A  L  N  C  I  Q  F  L  E  R  C  S  R  L  L  I  L  L  Q  S  L  T  I  E  V  F  T  F  H  V  T  S  V  M  *  L  T  V  S  V  M  S  F  E  M  V  S  N  F  L  Y  T  *  F  A  V  *  T  L  I  K  V  *  W  S  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52210" stop="52325"/>
                    <exon start="52422" stop="52458"/>
                    <exon start="53496" stop="53575"/>
                    <exon start="53887" stop="53938"/>
                    <exon start="54053" stop="54186"/>
                    <exon start="54512" stop="54626"/>
                    <exon start="54743" stop="54829"/>
                    <exon start="54967" stop="55015"/>
                    <exon start="56207" stop="56291"/>
                    <exon start="57538" stop="57616"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>831</number_coding_nucleotides>
                  <number_encoded_amino_acids>277</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DQKMGSVPLPSSSLLISSSSSSIFGRSSSTISYPHRRFRKVDVSCDYSCFEIRDVSYRPPGTKIDLLSQVNLSIPEKSFGLIFGRSGSGKTTLLQLIAGLSKPTSGSIYVQRYGDDDQQIKSPEPLQPERVGIVFQFPERYFVADTVLDEVTFGWPRQKGGLQLRELLASRLQKAIMSVGLTGISLDKDPHSLSGGYKRRLALAIQLVQTPDLLILDEPLAGLDWKARADVAKLLKDLKKELTLLVVSHDLKELASLVDQSWRMEMGGALKKEPLPI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="55231" e_stop="55955"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.953"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.953">
            <gDNA_exon_boundary e_start="55231" e_stop="55955" e_length="725"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55231" stop="55955"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545825" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55232" stop="55634"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354704" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTGCTATGCCTGCACAAGCATTTTACTTTTGTTATATTTGATGAACAACCCTTTTTCTCACCATGGTTATTGAAGTCTTGATTCCATCTTCCATATTCTGTAATCTGAGTAGTCTGTTCTTACAAAAGTCCTAACATGTTATCTTATGACAGAGACACCAAGATTGTCAACTCTTAGTAAACCCTATAGGCTGAGCTGCTAATAATGACAAACAAGTAAGAATAGGACGAGTAGTTAGCTTTGGTAATATAAAGAATAGAGTCAGAGGTTATGCTACCTGCTTTTACTTTATGAAGAATATGCTGAATGTAAATCTTTCTGCCATAGAATATTAATATTCTATGTTAGGTTGCAAATTCTCCAGAACTAAAGGTAACCAGGGTGGGATCTCTATATCTATTTTAGAGGAACTCTTCTTTGGCTTCACTTAAAAGCAATTTTTTTTGCTTCTTCTTGTAGAAGCTCAGAGTTCCTTGTAGGGCTATCAGATCTTATTCACCAAATATACATCGATGTACACATTGTTGTGTTAGAACACTCTTTCTGCTATCTGTGTACTAGCTCTCATATTTGCTTTTGCTGATATTTTACAAGGGCTATTTTGAAATTTTTTATATAGTTAATTCTTTACTATGGTTGGTACAAGTGAAGTTCAAGAGCTTGCCAATTAGATCATACCTCTCTTTGGATTGCATGTAGTATAATGGTAGTGAGTCTTGGTTGT</gDNA_template>
            <first_frame> I  A  M  P  A  Q  A  F  Y  F  C  Y  I  *  *  T  T  L  F  L  T  M  V  I  E  V  L  I  P  S  S  I  F  C  N  L  S  S  L  F  L  Q  K  S  *  H  V  I  L  *  Q  R  H  Q  D  C  Q  L  L  V  N  P  I  G  *  A  A  N  N  D  K  Q  V  R  I  G  R  V  V  S  F  G  N  I  K  N  R  V  R  G  Y  A  T  C  F  Y  F  M  K  N  M  L  N  V  N  L  S  A  I  E  Y  *  Y  S  M  L  G  C  K  F  S  R  T  K  G  N  Q  G  G  I  S  I  S  I  L  E  E  L  F  F  G  F  T  *  K  Q  F  F  L  L  L  L  V  E  A  Q  S  S  L  *  G  Y  Q  I  L  F  T  K  Y  T  S  M  Y  T  L  L  C  *  N  T  L  S  A  I  C  V  L  A  L  I  F  A  F  A  D  I  L  Q  G  L  F  *  N  F  L  Y  S  *  F  F  T  M  V  G  T  S  E  V  Q  E  L  A  N  *  I  I  P  L  F  G  L  H  V  V  *  W  *  *  V  L  V   </first_frame>
            <second_frame>  L  L  C  L  H  K  H  F  T  F  V  I  F  D  E  Q  P  F  F  S  P  W  L  L  K  S  *  F  H  L  P  Y  S  V  I  *  V  V  C  S  Y  K  S  P  N  M  L  S  Y  D  R  D  T  K  I  V  N  S  *  *  T  L  *  A  E  L  L  I  M  T  N  K  *  E  *  D  E  *  L  A  L  V  I  *  R  I  E  S  E  V  M  L  P  A  F  T  L  *  R  I  C  *  M  *  I  F  L  P  *  N  I  N  I  L  C  *  V  A  N  S  P  E  L  K  V  T  R  V  G  S  L  Y  L  F  *  R  N  S  S  L  A  S  L  K  S  N  F  F  C  F  F  L  *  K  L  R  V  P  C  R  A  I  R  S  Y  S  P  N  I  H  R  C  T  H  C  C  V  R  T  L  F  L  L  S  V  Y  *  L  S  Y  L  L  L  L  I  F  Y  K  G  Y  F  E  I  F  Y  I  V  N  S  L  L  W  L  V  Q  V  K  F  K  S  L  P  I  R  S  Y  L  S  L  D  C  M  *  Y  N  G  S  E  S  W  L  </second_frame>
            <third_frame>   C  Y  A  C  T  S  I  L  L  L  L  Y  L  M  N  N  P  F  S  H  H  G  Y  *  S  L  D  S  I  F  H  I  L  *  S  E  *  S  V  L  T  K  V  L  T  C  Y  L  M  T  E  T  P  R  L  S  T  L  S  K  P  Y  R  L  S  C  *  *  *  Q  T  S  K  N  R  T  S  S  *  L  W  *  Y  K  E  *  S  Q  R  L  C  Y  L  L  L  L  Y  E  E  Y  A  E  C  K  S  F  C  H  R  I  L  I  F  Y  V  R  L  Q  I  L  Q  N  *  R  *  P  G  W  D  L  Y  I  Y  F  R  G  T  L  L  W  L  H  L  K  A  I  F  F  A  S  S  C  R  S  S  E  F  L  V  G  L  S  D  L  I  H  Q  I  Y  I  D  V  H  I  V  V  L  E  H  S  F  C  Y  L  C  T  S  S  H  I  C  F  C  *  Y  F  T  R  A  I  L  K  F  F  I  *  L  I  L  Y  Y  G  W  Y  K  *  S  S  R  A  C  Q  L  D  H  T  S  L  W  I  A  C  S  I  M  V  V  S  L  G  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55608" stop="55814"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PGWDLYIYFRGTLLWLHLKAIFFASSCRSSEFLVGLSDLIHQIYIDVHIVVLEHSFCYLCTSSHICFC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="52703" e_stop="53276"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="52703" e_stop="53276" e_length="574"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52703" stop="52951"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322942" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52863" stop="53276"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203446" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTTTTCTTCATTATTTGTTTGCTTTCTTTTCTCTGGGTTTAGGGATACTCGATAGCTTCGGTTGTTATGAATTTGCTAACTTCTTAGGTTCAGAGGTTCAGTCTATCTGAAGGAGTTTGGTGGTATTTGAGCTTTTCTGGAACTTGATAACTATTGCAGGCGCTTTGTATCATCTATATACGAGCAGAAGCAATGGATATATCACAGGCTTCCTCTTTTTTCTCTTCTTCTAGGTGACAGCAGTGGCTAAGCCATTAATTCTGATAAGGGGATTCATAAAGAAGAAAAATACAAAATGGCATGCTGATTTGTACCTTTCTACTCTTATGTATAGGGAATTTGAGATCTTTTTTGAACAAGAAAACATAATTTTCACCTATTTGCTAGTTTAACTTCCTGACAATTGAATTCCTTTCGTAGTGTATGGCTCCGTCACTGGACTGGCGGAGAAAGGAGTTATGTTAATTAAGTGGCGAGAACTTATTCTGTAACATATACACTCTTTAACCAAAAAGTCATTCAACAACTTTTTATTAAATTCCCAAATGATTTCTCTTTCTTCAATTTTCCATA</gDNA_template>
            <first_frame> S  F  L  H  Y  L  F  A  F  F  S  L  G  L  G  I  L  D  S  F  G  C  Y  E  F  A  N  F  L  G  S  E  V  Q  S  I  *  R  S  L  V  V  F  E  L  F  W  N  L  I  T  I  A  G  A  L  Y  H  L  Y  T  S  R  S  N  G  Y  I  T  G  F  L  F  F  L  F  F  *  V  T  A  V  A  K  P  L  I  L  I  R  G  F  I  K  K  K  N  T  K  W  H  A  D  L  Y  L  S  T  L  M  Y  R  E  F  E  I  F  F  E  Q  E  N  I  I  F  T  Y  L  L  V  *  L  P  D  N  *  I  P  F  V  V  Y  G  S  V  T  G  L  A  E  K  G  V  M  L  I  K  W  R  E  L  I  L  *  H  I  H  S  L  T  K  K  S  F  N  N  F  L  L  N  S  Q  M  I  S  L  S  S  I  F  H  </first_frame>
            <second_frame>  L  F  F  I  I  C  L  L  S  F  L  W  V  *  G  Y  S  I  A  S  V  V  M  N  L  L  T  S  *  V  Q  R  F  S  L  S  E  G  V  W  W  Y  L  S  F  S  G  T  *  *  L  L  Q  A  L  C  I  I  Y  I  R  A  E  A  M  D  I  S  Q  A  S  S  F  F  S  S  S  R  *  Q  Q  W  L  S  H  *  F  *  *  G  D  S  *  R  R  K  I  Q  N  G  M  L  I  C  T  F  L  L  L  C  I  G  N  L  R  S  F  L  N  K  K  T  *  F  S  P  I  C  *  F  N  F  L  T  I  E  F  L  S  *  C  M  A  P  S  L  D  W  R  R  K  E  L  C  *  L  S  G  E  N  L  F  C  N  I  Y  T  L  *  P  K  S  H  S  T  T  F  Y  *  I  P  K  *  F  L  F  L  Q  F  S  I </second_frame>
            <third_frame>   F  S  S  L  F  V  C  F  L  F  S  G  F  R  D  T  R  *  L  R  L  L  *  I  C  *  L  L  R  F  R  G  S  V  Y  L  K  E  F  G  G  I  *  A  F  L  E  L  D  N  Y  C  R  R  F  V  S  S  I  Y  E  Q  K  Q  W  I  Y  H  R  L  P  L  F  S  L  L  L  G  D  S  S  G  *  A  I  N  S  D  K  G  I  H  K  E  E  K  Y  K  M  A  C  *  F  V  P  F  Y  S  Y  V  *  G  I  *  D  L  F  *  T  R  K  H  N  F  H  L  F  A  S  L  T  S  *  Q  L  N  S  F  R  S  V  W  L  R  H  W  T  G  G  E  R  S  Y  V  N  *  V  A  R  T  Y  S  V  T  Y  T  L  F  N  Q  K  V  I  Q  Q  L  F  I  K  F  P  N  D  F  S  F  F  N  F  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0146O12.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="55966" e_stop="56291"/>
            <exon e_start="57538" e_stop="57668"/>
            <exon e_start="59102" e_stop="59462"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="0.972"/>
          <exon-intron don_prob="0.744" acc_prob="0.988" e_score="0.977"/>
          <exon-only e_score="0.964"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.972">
            <gDNA_exon_boundary e_start="55966" e_stop="56291" e_length="326"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="56292" i_stop="57537" i_length="1246"/>
          </intron>
          <exon e_serial="2" e_score="0.977">
            <gDNA_exon_boundary e_start="57538" e_stop="57668" e_length="131"/>
          </exon>
          <intron i_serial="2" don_prob="0.744" acc_prob="0.988">
            <gDNA_intron_boundary i_start="57669" i_stop="59101" i_length="1433"/>
          </intron>
          <exon e_serial="3" e_score="0.964">
            <gDNA_exon_boundary e_start="59102" e_stop="59462" e_length="361"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55966" stop="56291"/>
              <exon start="57538" stop="57668"/>
              <exon start="59102" stop="59462"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545824" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGACTGTTTTATGGAGTGAAGCTATTCCCACAAAGATTTTGAAAGCTTATTTTACTATTTCTTTTGTTTGGTATGATATAGCTAGCCTAGTCCTTTTTAAAAATGAAATACTTGTTTTTAAATATAGATTAGTTATTAGATGGACAATTTTTTTTTTTGTATTTTTTGGCTCCACTTCAACTATATTTGAGTACCTAATCTCAGTTTCTAAAAAAGTTCATTGTTTGTGAGGGAAATCAGATTGGAAGGCTCGTGCAGATGTGGCAAAATTGTTAAAAGATCTGAAGAAGGAGCTAACTTTACTTGTTGTCAGCCATGACCTCAA : GGAGTTGGCATCTTTGGTAGATCAATCCTGGAGGATGGAAATGGGAGGAGCACTTAAAAAAGAGCCTCTACCCATTTAATGCACTGAACTTATAATGTTCCCAACAATCATTTTCTGATGTAATATATGAG : GTTTTTATGAGCCTTGAATTGCATACAATTCTTGGAGAGGTGCTCAAGGTTATTGATTTTGCTTCAATCCCTGACCATCGAGGTCTTCACATTTCATGTAACCTCTGTAATGTAATTAACAGTTTCTGTAATGAGTTTTGAGATGGTTTCTAATTTTCTGTACACTTAGTTCGCCGTTTAAACTCTCATTAAAGTTTGATGGTCTGCAGCATTTTCTTTGTCCTCGTCTCTCACCAAAAGTTTTTGAATGTTTATTGGAATTTTGTTCAAAATATGTATGGTAGTATGTATGTATTGGTAAATTAAATTACACTGTTGACATATATGAATAGTAGCTTTTCTAGTTGTGTTAAAAGAATGA</gDNA_template>
            <first_frame> R  T  V  L  W  S  E  A  I  P  T  K  I  L  K  A  Y  F  T  I  S  F  V  W  Y  D  I  A  S  L  V  L  F  K  N  E  I  L  V  F  K  Y  R  L  V  I  R  W  T  I  F  F  F  V  F  F  G  S  T  S  T  I  F  E  Y  L  I  S  V  S  K  K  V  H  C  L  *  G  K  S  D  W  K  A  R  A  D  V  A  K  L  L  K  D  L  K  K  E  L  T  L  L  V  V  S  H  D  L  K :   E  L  A  S  L  V  D  Q  S  W  R  M  E  M  G  G  A  L  K  K  E  P  L  P  I  *  C  T  E  L  I  M  F  P  T  I  I  F  *  C  N  I  *   : G  F  Y  E  P  *  I  A  Y  N  S  W  R  G  A  Q  G  Y  *  F  C  F  N  P  *  P  S  R  S  S  H  F  M  *  P  L  *  C  N  *  Q  F  L  *  *  V  L  R  W  F  L  I  F  C  T  L  S  S  P  F  K  L  S  L  K  F  D  G  L  Q  H  F  L  C  P  R  L  S  P  K  V  F  E  C  L  L  E  F  C  S  K  Y  V  W  *  Y  V  C  I  G  K  L  N  Y  T  V  D  I  Y  E  *  *  L  F  *  L  C  *  K  N   </first_frame>
            <second_frame>  G  L  F  Y  G  V  K  L  F  P  Q  R  F  *  K  L  I  L  L  F  L  L  F  G  M  I  *  L  A  *  S  F  L  K  M  K  Y  L  F  L  N  I  D  *  L  L  D  G  Q  F  F  F  L  Y  F  L  A  P  L  Q  L  Y  L  S  T  *  S  Q  F  L  K  K  F  I  V  C  E  G  N  Q  I  G  R  L  V  Q  M  W  Q  N  C  *  K  I  *  R  R  S  *  L  Y  L  L  S  A  M  T  S   : R  S  W  H  L  W  *  I  N  P  G  G  W  K  W  E  E  H  L  K  K  S  L  Y  P  F  N  A  L  N  L  *  C  S  Q  Q  S  F  S  D  V  I  Y  E  :  V  F  M  S  L  E  L  H  T  I  L  G  E  V  L  K  V  I  D  F  A  S  I  P  D  H  R  G  L  H  I  S  C  N  L  C  N  V  I  N  S  F  C  N  E  F  *  D  G  F  *  F  S  V  H  L  V  R  R  L  N  S  H  *  S  L  M  V  C  S  I  F  F  V  L  V  S  H  Q  K  F  L  N  V  Y  W  N  F  V  Q  N  M  Y  G  S  M  Y  V  L  V  N  *  I  T  L  L  T  Y  M  N  S  S  F  S  S  C  V  K  R  M  </second_frame>
            <third_frame>   D  C  F  M  E  *  S  Y  S  H  K  D  F  E  S  L  F  Y  Y  F  F  C  L  V  *  Y  S  *  P  S  P  F  *  K  *  N  T  C  F  *  I  *  I  S  Y  *  M  D  N  F  F  F  C  I  F  W  L  H  F  N  Y  I  *  V  P  N  L  S  F  *  K  S  S  L  F  V  R  E  I  R  L  E  G  S  C  R  C  G  K  I  V  K  R  S  E  E  G  A  N  F  T  C  C  Q  P  *  P  Q  :  G  V  G  I  F  G  R  S  I  L  E  D  G  N  G  R  S  T  *  K  R  A  S  T  H  L  M  H  *  T  Y  N  V  P  N  N  H  F  L  M  *  Y  M  R :   F  L  *  A  L  N  C  I  Q  F  L  E  R  C  S  R  L  L  I  L  L  Q  S  L  T  I  E  V  F  T  F  H  V  T  S  V  M  *  L  T  V  S  V  M  S  F  E  M  V  S  N  F  L  Y  T  *  F  A  V  *  T  L  I  K  V  *  W  S  A  A  F  S  L  S  S  S  L  T  K  S  F  *  M  F  I  G  I  L  F  K  I  C  M  V  V  C  M  Y  W  *  I  K  L  H  C  *  H  I  *  I  V  A  F  L  V  V  L  K  E  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55966" stop="56196"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RTVLWSEAIPTKILKAYFTISFVWYDIASLVLFKNEILVFKYRLVIRWTIFFFVFFGSTSTIFEYLISVSKKVHCL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="61480" PGL_stop="62207"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61480" e_stop="62207"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.909"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.909">
            <gDNA_exon_boundary e_start="61480" e_stop="62207" e_length="728"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61480" stop="62207"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343233" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAACAAATTGAGGATGAGACCGTCAAGTTTGCACACTATTTGGGTATCAAAGTTGTTTCTATTGTTGGTGGGCAGTCCATAGAAGAGCAAGGTTTTAGGATTAGGCAAGGCTGTGAAGTTGTGATTGCGACCCCTGGGCGACTTCTCGATTGCTTGGAGAGACGTTATTGTGTTCTGAACCAGTGTAATTATGTTGTTCTCGATGAGGCTGACCGGATGATTGATATGGGTTTTGGACCTCAAGTTGTTGGTGTACTGGATGCAATGCCTTCAAGTAATATGAAACCAAAGAACGAGGATGAAAAGCTTGATGAGAATAAGATTTATCGAACCACTTATATGTTCAGTGCTACCATGCCACCTGCCGTAGAGCGGCTGGCTAGAAATTACTTAAGAAATCCTGCTGTCGTGACTATTGGCACTGCTGGAAAGGTTACTGACCTCATTACTCAGCATGTCTTCATGGTAAAGGAATCTGAGAAAATGTTTAAGTTGCAGAGGTTTCTGGATGAGCTTGGAGATAAGACTGCTATTGTGTTCATCAACTCTAGAAAGCGGGTTAACACTGTTGCCAAGCATCTGGATAAAGCTGGCTATAGGGTAACCACACTGCATGGTGGGAAATCACAGGAGCAGAGGGAAATCAGCCTTGAAGGATTTAGGACAAAGAAGTATAATGTGTTAGTTGCTAGTGATGTTGCCGGTCGTGGAATTGATATACCTGATG</gDNA_template>
            <first_frame> S  T  N  *  G  *  D  R  Q  V  C  T  L  F  G  Y  Q  S  C  F  Y  C  W  W  A  V  H  R  R  A  R  F  *  D  *  A  R  L  *  S  C  D  C  D  P  W  A  T  S  R  L  L  G  E  T  L  L  C  S  E  P  V  *  L  C  C  S  R  *  G  *  P  D  D  *  Y  G  F  W  T  S  S  C  W  C  T  G  C  N  A  F  K  *  Y  E  T  K  E  R  G  *  K  A  *  *  E  *  D  L  S  N  H  L  Y  V  Q  C  Y  H  A  T  C  R  R  A  A  G  *  K  L  L  K  K  S  C  C  R  D  Y  W  H  C  W  K  G  Y  *  P  H  Y  S  A  C  L  H  G  K  G  I  *  E  N  V  *  V  A  E  V  S  G  *  A  W  R  *  D  C  Y  C  V  H  Q  L  *  K  A  G  *  H  C  C  Q  A  S  G  *  S  W  L  *  G  N  H  T  A  W  W  E  I  T  G  A  E  G  N  Q  P  *  R  I  *  D  K  E  V  *  C  V  S  C  *  *  C  C  R  S  W  N  *  Y  T  *   </first_frame>
            <second_frame>  Q  Q  I  E  D  E  T  V  K  F  A  H  Y  L  G  I  K  V  V  S  I  V  G  G  Q  S  I  E  E  Q  G  F  R  I  R  Q  G  C  E  V  V  I  A  T  P  G  R  L  L  D  C  L  E  R  R  Y  C  V  L  N  Q  C  N  Y  V  V  L  D  E  A  D  R  M  I  D  M  G  F  G  P  Q  V  V  G  V  L  D  A  M  P  S  S  N  M  K  P  K  N  E  D  E  K  L  D  E  N  K  I  Y  R  T  T  Y  M  F  S  A  T  M  P  P  A  V  E  R  L  A  R  N  Y  L  R  N  P  A  V  V  T  I  G  T  A  G  K  V  T  D  L  I  T  Q  H  V  F  M  V  K  E  S  E  K  M  F  K  L  Q  R  F  L  D  E  L  G  D  K  T  A  I  V  F  I  N  S  R  K  R  V  N  T  V  A  K  H  L  D  K  A  G  Y  R  V  T  T  L  H  G  G  K  S  Q  E  Q  R  E  I  S  L  E  G  F  R  T  K  K  Y  N  V  L  V  A  S  D  V  A  G  R  G  I  D  I  P  D  </second_frame>
            <third_frame>   N  K  L  R  M  R  P  S  S  L  H  T  I  W  V  S  K  L  F  L  L  L  V  G  S  P  *  K  S  K  V  L  G  L  G  K  A  V  K  L  *  L  R  P  L  G  D  F  S  I  A  W  R  D  V  I  V  F  *  T  S  V  I  M  L  F  S  M  R  L  T  G  *  L  I  W  V  L  D  L  K  L  L  V  Y  W  M  Q  C  L  Q  V  I  *  N  Q  R  T  R  M  K  S  L  M  R  I  R  F  I  E  P  L  I  C  S  V  L  P  C  H  L  P  *  S  G  W  L  E  I  T  *  E  I  L  L  S  *  L  L  A  L  L  E  R  L  L  T  S  L  L  S  M  S  S  W  *  R  N  L  R  K  C  L  S  C  R  G  F  W  M  S  L  E  I  R  L  L  L  C  S  S  T  L  E  S  G  L  T  L  L  P  S  I  W  I  K  L  A  I  G  *  P  H  C  M  V  G  N  H  R  S  R  G  K  S  A  L  K  D  L  G  Q  R  S  I  M  C  *  L  L  V  M  L  P  V  V  E  L  I  Y  L  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61481" stop="62206"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>726</number_coding_nucleotides>
                  <number_encoded_amino_acids>242</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QQIEDETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLLDCLERRYCVLNQCNYVVLDEADRMIDMGFGPQVVGVLDAMPSSNMKPKNEDEKLDENKIYRTTYMFSATMPPAVERLARNYLRNPAVVTIGTAGKVTDLITQHVFMVKESEKMFKLQRFLDELGDKTAIVFINSRKRVNTVAKHLDKAGYRVTTLHGGKSQEQREISLEGFRTKKYNVLVASDVAGRGIDIPD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="69421" PGL_stop="70355"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69421" e_stop="70355"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="69421" e_stop="70355" e_length="935"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69421" stop="69794"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729311" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69438" stop="69858"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729308" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69456" stop="70203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E699579" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69480" stop="70118"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E721357" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69485" stop="70355"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E687903" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69486" stop="70255"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327677" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCCTCTTTTTATTTATTTATTACTATAACCTGCAAGGTAGACCCATCTAGTTTCCATTGATGGATCCCAAACAGGCTAACCACAACAATATTAAGCCTACTCATGATCAGATAAAAGAGTTGCAGATTTTGAAAAATGATGAAACGAACAAGGTGGCTGCTCCCAAAAGAAAAGATAGGCATACAAAAGTTGAAGGTAGAGGGAGGAGAATACGTATGCCGGCGCTCTGTGCAGCAAGAATCTTCCAGCTTACGCGCGAATTGGGTCATAAATCTGATGGTGAGACAATTCAGTGGCTGCTGCAGCAAGCCGAGCCTTCGATTATTGCTGCTACTGGCACAGGGACAATACCTGCCTCGGCTTTAGCTGCAGCAGCCTCTGTTTCTCAACAGGGGATCTCTGTATCAGCTGGTTTAATGATTGAATCGGGGGCGAATATCGCGGGGTCTGGTAGCAGTAGAAGTAGTAATAGTAGGACCAATTGGCCAATGATCTGTGGGAATTTTGGAAGACCCCATTTGGCTACAGCAGGAATGTGGCCTGCCCCTGCCCCTGTTGTCACTAGTTTTGGGTTTCAATCCTCATCTGCTCCATCAAGCGCGAGTTTAGGTAGTGATAGTTCAAATTATTACTTACAGAAAATTGGGTTTCCTGGATTTGATCTGCCTGCAGCTACAAGTATGAATCCGATGTGTTTTACTTCAATTCTTGGTGGAAGTAATCAGCAACTGCCAGGATTGGAACTGGGATTATCTCAAGAGGGTCATTTAGGGGTTTTGAACCAGATATACCAGCAGGCAAGAATGCAACATCCGCAGCAGCAACATCAACAACAACAACAATCTCCGGAGGAGGATTCTCAAGGATCAGGACATTAATAAAAGACCTGAGTTAGGTTCTTTTTGGTGAATGATTTTTCATTTGTTAGGATGTGT</gDNA_template>
            <first_frame> A  S  F  Y  L  F  I  T  I  T  C  K  V  D  P  S  S  F  H  *  W  I  P  N  R  L  T  T  T  I  L  S  L  L  M  I  R  *  K  S  C  R  F  *  K  M  M  K  R  T  R  W  L  L  P  K  E  K  I  G  I  Q  K  L  K  V  E  G  G  E  Y  V  C  R  R  S  V  Q  Q  E  S  S  S  L  R  A  N  W  V  I  N  L  M  V  R  Q  F  S  G  C  C  S  K  P  S  L  R  L  L  L  L  L  A  Q  G  Q  Y  L  P  R  L  *  L  Q  Q  P  L  F  L  N  R  G  S  L  Y  Q  L  V  *  *  L  N  R  G  R  I  S  R  G  L  V  A  V  E  V  V  I  V  G  P  I  G  Q  *  S  V  G  I  L  E  D  P  I  W  L  Q  Q  E  C  G  L  P  L  P  L  L  S  L  V  L  G  F  N  P  H  L  L  H  Q  A  R  V  *  V  V  I  V  Q  I  I  T  Y  R  K  L  G  F  L  D  L  I  C  L  Q  L  Q  V  *  I  R  C  V  L  L  Q  F  L  V  E  V  I  S  N  C  Q  D  W  N  W  D  Y  L  K  R  V  I  *  G  F  *  T  R  Y  T  S  R  Q  E  C  N  I  R  S  S  N  I  N  N  N  N  N  L  R  R  R  I  L  K  D  Q  D  I  N  K  R  P  E  L  G  S  F  W  *  M  I  F  H  L  L  G  C   </first_frame>
            <second_frame>  P  L  F  I  Y  L  L  L  *  P  A  R  *  T  H  L  V  S  I  D  G  S  Q  T  G  *  P  Q  Q  Y  *  A  Y  S  *  S  D  K  R  V  A  D  F  E  K  *  *  N  E  Q  G  G  C  S  Q  K  K  R  *  A  Y  K  S  *  R  *  R  E  E  N  T  Y  A  G  A  L  C  S  K  N  L  P  A  Y  A  R  I  G  S  *  I  *  W  *  D  N  S  V  A  A  A  A  S  R  A  F  D  Y  C  C  Y  W  H  R  D  N  T  C  L  G  F  S  C  S  S  L  C  F  S  T  G  D  L  C  I  S  W  F  N  D  *  I  G  G  E  Y  R  G  V  W  *  Q  *  K  *  *  *  *  D  Q  L  A  N  D  L  W  E  F  W  K  T  P  F  G  Y  S  R  N  V  A  C  P  C  P  C  C  H  *  F  W  V  S  I  L  I  C  S  I  K  R  E  F  R  *  *  *  F  K  L  L  L  T  E  N  W  V  S  W  I  *  S  A  C  S  Y  K  Y  E  S  D  V  F  Y  F  N  S  W  W  K  *  S  A  T  A  R  I  G  T  G  I  I  S  R  G  S  F  R  G  F  E  P  D  I  P  A  G  K  N  A  T  S  A  A  A  T  S  T  T  T  T  I  S  G  G  G  F  S  R  I  R  T  L  I  K  D  L  S  *  V  L  F  G  E  *  F  F  I  C  *  D  V  </second_frame>
            <third_frame>   L  F  L  F  I  Y  Y  Y  N  L  Q  G  R  P  I  *  F  P  L  M  D  P  K  Q  A  N  H  N  N  I  K  P  T  H  D  Q  I  K  E  L  Q  I  L  K  N  D  E  T  N  K  V  A  A  P  K  R  K  D  R  H  T  K  V  E  G  R  G  R  R  I  R  M  P  A  L  C  A  A  R  I  F  Q  L  T  R  E  L  G  H  K  S  D  G  E  T  I  Q  W  L  L  Q  Q  A  E  P  S  I  I  A  A  T  G  T  G  T  I  P  A  S  A  L  A  A  A  A  S  V  S  Q  Q  G  I  S  V  S  A  G  L  M  I  E  S  G  A  N  I  A  G  S  G  S  S  R  S  S  N  S  R  T  N  W  P  M  I  C  G  N  F  G  R  P  H  L  A  T  A  G  M  W  P  A  P  A  P  V  V  T  S  F  G  F  Q  S  S  S  A  P  S  S  A  S  L  G  S  D  S  S  N  Y  Y  L  Q  K  I  G  F  P  G  F  D  L  P  A  A  T  S  M  N  P  M  C  F  T  S  I  L  G  G  S  N  Q  Q  L  P  G  L  E  L  G  L  S  Q  E  G  H  L  G  V  L  N  Q  I  Y  Q  Q  A  R  M  Q  H  P  Q  Q  Q  H  Q  Q  Q  Q  Q  S  P  E  E  D  S  Q  G  S  G  H  *  *  K  T  *  V  R  F  F  L  V  N  D  F  S  F  V  R  M  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69471" stop="70298"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>825</number_coding_nucleotides>
                  <number_encoded_amino_acids>275</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FPLMDPKQANHNNIKPTHDQIKELQILKNDETNKVAAPKRKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAASVSQQGISVSAGLMIESGANIAGSGSSRSSNSRTNWPMICGNFGRPHLATAGMWPAPAPVVTSFGFQSSSAPSSASLGSDSSNYYLQKIGFPGFDLPAATSMNPMCFTSILGGSNQQLPGLELGLSQEGHLGVLNQIYQQARMQHPQQQHQQQQQSPEEDSQGSGH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="81210" PGL_stop="72959"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="81210" e_stop="81119"/>
            <exon e_start="81026" e_stop="80847"/>
            <exon e_start="78867" e_stop="78697"/>
            <exon e_start="73329" e_stop="72959"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.973" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="81210" e_stop="81119" e_length="92"/>
          </exon>
          <intron i_serial="1" don_prob="0.973" acc_prob="0.986">
            <gDNA_intron_boundary i_start="81118" i_stop="81027" i_length="92"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="81026" e_stop="80847" e_length="180"/>
          </exon>
          <intron i_serial="2" don_prob="0.989" acc_prob="0.980">
            <gDNA_intron_boundary i_start="80846" i_stop="78868" i_length="1979"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="78867" e_stop="78697" e_length="171"/>
          </exon>
          <intron i_serial="3" don_prob="0.978" acc_prob="0.991">
            <gDNA_intron_boundary i_start="78696" i_stop="73330" i_length="5367"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="73329" e_stop="72959" e_length="371"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81210" stop="81119"/>
              <exon start="81026" stop="80847"/>
              <exon start="78867" stop="78697"/>
              <exon start="73329" stop="72959"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E722486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81185" stop="81119"/>
              <exon start="81026" stop="80847"/>
              <exon start="78867" stop="78697"/>
              <exon start="73329" stop="73051"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342310" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81180" stop="81119"/>
              <exon start="81026" stop="80847"/>
              <exon start="78867" stop="78697"/>
              <exon start="73329" stop="73103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295234" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81179" stop="81119"/>
              <exon start="81026" stop="80847"/>
              <exon start="78867" stop="78697"/>
              <exon start="73329" stop="73032"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327915" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81179" stop="81119"/>
              <exon start="81026" stop="80847"/>
              <exon start="78867" stop="78697"/>
              <exon start="73329" stop="73036"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328020" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80932" stop="80847"/>
              <exon start="78867" stop="78697"/>
              <exon start="73329" stop="73184"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217120" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACAGTGGAGTTCAGTTGTGTCTAGGGTTCCCCCATTTTAGCTGTGCGATTCAATGCAATCAAGCAGAAGAATCCTTGCTCTTTAATACACTG : GTTTCGGAGGTGAAAAAACTGAGAAGAAAGAGGTTGGTGGGCGATCACAAATGCCGGAGGAAGATTTGACTGAAGTTAAGTTTCGTTTGTTCGATGGATCAGATGTGGGTCCATTTCAGTTCTCCCCGGCTTCAACCGTAGCTATGCTGAAAGAGAGAATTGTTGCTGAGTGGCCTAAAG : ATAAGAAAATTGCACCTAAGGCGGCAAATGATGTCAAGTTGATAAGTGCTGGGAAAATTTTGGAGAACAACAAGACTGTTGGTCAATGTAAAACACCTTTCGGTGAACTACCTAATGGTGTGATTACCATGCATGCTGTTGTACAGCCATCAGTAGGTAAATCAAAATCAG : AAAAGAAGATTGACGAGACTCCGAAGAAAAGTGTGTGCGCGTGTACCATAATGTGAGATTGTAAGTGATTCAAGTTTAATCCTGTGGTATTCTTGGGGGATAAACTGCTGCTGTGAAGTTCAGGGAAAACAGTATGATAGCTCATTGTTACTTGTTTGTTCGTTGAACGGCTATTCAATGTAACAGCGTGTCTATTTGTTTGAATGAATTTGGTAGGTGTACATTTTGTAATTGCAGATTTCTTATACAGAAATACAGAAAGTGTGCTGGATTGCATGCTATAGGATTTTACCGAGCTCTTGTTATTCTATTCTGGGTCCTTATTATTCAACTTAGATCGTGATGATCCGTATACTCTAATCTTTGACGTC</gDNA_template>
            <first_frame> T  V  E  F  S  C  V  *  G  S  P  I  L  A  V  R  F  N  A  I  K  Q  K  N  P  C  S  L  I  H  W :   F  R  R  *  K  N  *  E  E  R  G  W  W  A  I  T  N  A  G  G  R  F  D  *  S  *  V  S  F  V  R  W  I  R  C  G  S  I  S  V  L  P  G  F  N  R  S  Y  A  E  R  E  N  C  C  *  V  A  *  R :   *  E  N  C  T  *  G  G  K  *  C  Q  V  D  K  C  W  E  N  F  G  E  Q  Q  D  C  W  S  M  *  N  T  F  R  *  T  T  *  W  C  D  Y  H  A  C  C  C  T  A  I  S  R  *  I  K  I  R :   K  E  D  *  R  D  S  E  E  K  C  V  R  V  Y  H  N  V  R  L  *  V  I  Q  V  *  S  C  G  I  L  G  G  *  T  A  A  V  K  F  R  E  N  S  M  I  A  H  C  Y  L  F  V  R  *  T  A  I  Q  C  N  S  V  S  I  C  L  N  E  F  G  R  C  T  F  C  N  C  R  F  L  I  Q  K  Y  R  K  C  A  G  L  H  A  I  G  F  Y  R  A  L  V  I  L  F  W  V  L  I  I  Q  L  R  S  *  *  S  V  Y  S  N  L  *  R  </first_frame>
            <second_frame>  Q  W  S  S  V  V  S  R  V  P  P  F  *  L  C  D  S  M  Q  S  S  R  R  I  L  A  L  *  Y  T   : G  F  G  G  E  K  T  E  K  K  E  V  G  G  R  S  Q  M  P  E  E  D  L  T  E  V  K  F  R  L  F  D  G  S  D  V  G  P  F  Q  F  S  P  A  S  T  V  A  M  L  K  E  R  I  V  A  E  W  P  K   : D  K  K  I  A  P  K  A  A  N  D  V  K  L  I  S  A  G  K  I  L  E  N  N  K  T  V  G  Q  C  K  T  P  F  G  E  L  P  N  G  V  I  T  M  H  A  V  V  Q  P  S  V  G  K  S  K  S   : E  K  K  I  D  E  T  P  K  K  S  V  C  A  C  T  I  M  *  D  C  K  *  F  K  F  N  P  V  V  F  L  G  D  K  L  L  L  *  S  S  G  K  T  V  *  *  L  I  V  T  C  L  F  V  E  R  L  F  N  V  T  A  C  L  F  V  *  M  N  L  V  G  V  H  F  V  I  A  D  F  L  Y  R  N  T  E  S  V  L  D  C  M  L  *  D  F  T  E  L  L  L  F  Y  S  G  S  L  L  F  N  L  D  R  D  D  P  Y  T  L  I  F  D  V </second_frame>
            <third_frame>   S  G  V  Q  L  C  L  G  F  P  H  F  S  C  A  I  Q  C  N  Q  A  E  E  S  L  L  F  N  T  L  :  V  S  E  V  K  K  L  R  R  K  R  L  V  G  D  H  K  C  R  R  K  I  *  L  K  L  S  F  V  C  S  M  D  Q  M  W  V  H  F  S  S  P  R  L  Q  P  *  L  C  *  K  R  E  L  L  L  S  G  L  K  :  I  R  K  L  H  L  R  R  Q  M  M  S  S  *  *  V  L  G  K  F  W  R  T  T  R  L  L  V  N  V  K  H  L  S  V  N  Y  L  M  V  *  L  P  C  M  L  L  Y  S  H  Q  *  V  N  Q  N  Q  :  K  R  R  L  T  R  L  R  R  K  V  C  A  R  V  P  *  C  E  I  V  S  D  S  S  L  I  L  W  Y  S  W  G  I  N  C  C  C  E  V  Q  G  K  Q  Y  D  S  S  L  L  L  V  C  S  L  N  G  Y  S  M  *  Q  R  V  Y  L  F  E  *  I  W  *  V  Y  I  L  *  L  Q  I  S  Y  T  E  I  Q  K  V  C  W  I  A  C  Y  R  I  L  P  S  S  C  Y  S  I  L  G  P  Y  Y  S  T  *  I  V  M  I  R  I  L  *  S  L  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81125" stop="81119"/>
                    <exon start="81026" stop="80847"/>
                    <exon start="78867" stop="78697"/>
                    <exon start="73329" stop="73274"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>411</number_coding_nucleotides>
                  <number_encoded_amino_acids>137</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YTGFGGEKTEKKEVGGRSQMPEEDLTEVKFRLFDGSDVGPFQFSPASTVAMLKERIVAEWPKDKKIAPKAANDVKLISAGKILENNKTVGQCKTPFGELPNGVITMHAVVQPSVGKSKSEKKIDETPKKSVCACTIM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="81176" e_stop="81119"/>
            <exon e_start="81026" e_stop="80847"/>
            <exon e_start="78867" e_stop="78610"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.973" acc_prob="0.986" e_score="0.983"/>
          <exon-intron don_prob="0.989" acc_prob="0.980" e_score="1.000"/>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.983">
            <gDNA_exon_boundary e_start="81176" e_stop="81119" e_length="58"/>
          </exon>
          <intron i_serial="1" don_prob="0.973" acc_prob="0.986">
            <gDNA_intron_boundary i_start="81118" i_stop="81027" i_length="92"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="81026" e_stop="80847" e_length="180"/>
          </exon>
          <intron i_serial="2" don_prob="0.989" acc_prob="0.980">
            <gDNA_intron_boundary i_start="80846" i_stop="78868" i_length="1979"/>
          </intron>
          <exon e_serial="3" e_score="0.984">
            <gDNA_exon_boundary e_start="78867" e_stop="78610" e_length="258"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81176" stop="81119"/>
              <exon start="81026" stop="80847"/>
              <exon start="78867" stop="78610"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301149" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTAGCTGTGCGATTCAATGCAATCAAGCAGAAGAATCCTTGCTCTTTAATACACTG : GTTTCGGAGGTGAAAAAACTGAGAAGAAAGAGGTTGGTGGGCGATCACAAATGCCGGAGGAAGATTTGACTGAAGTTAAGTTTCGTTTGTTCGATGGATCAGATGTGGGTCCATTTCAGTTCTCCCCGGCTTCAACCGTAGCTATGCTGAAAGAGAGAATTGTTGCTGAGTGGCCTAAAG : ATAAGAAAATTGCACCTAAGGCGGCAAATGATGTCAAGTTGATAAGTGCTGGGAAAATTTTGGAGAACAACAAGACTGTTGGTCAATGTAAAACACCTTTCGGTGAACTACCTAATGGTGTGATTACCATGCATGCTGTTGTACAGCCATCAGTAGGTAAATCAAAATCAGGTGGGTTCCTCTTACTTGATTTGTGGTAATAGACACTGGTTTTACCCTTTCTGTAATGTATTTATATTTTTTGAGGCTATTGGTGAT</gDNA_template>
            <first_frame> F  *  L  C  D  S  M  Q  S  S  R  R  I  L  A  L  *  Y  T   : G  F  G  G  E  K  T  E  K  K  E  V  G  G  R  S  Q  M  P  E  E  D  L  T  E  V  K  F  R  L  F  D  G  S  D  V  G  P  F  Q  F  S  P  A  S  T  V  A  M  L  K  E  R  I  V  A  E  W  P  K   : D  K  K  I  A  P  K  A  A  N  D  V  K  L  I  S  A  G  K  I  L  E  N  N  K  T  V  G  Q  C  K  T  P  F  G  E  L  P  N  G  V  I  T  M  H  A  V  V  Q  P  S  V  G  K  S  K  S  G  G  F  L  L  L  D  L  W  *  *  T  L  V  L  P  F  L  *  C  I  Y  I  F  *  G  Y  W  *  </first_frame>
            <second_frame>  F  S  C  A  I  Q  C  N  Q  A  E  E  S  L  L  F  N  T  L  :  V  S  E  V  K  K  L  R  R  K  R  L  V  G  D  H  K  C  R  R  K  I  *  L  K  L  S  F  V  C  S  M  D  Q  M  W  V  H  F  S  S  P  R  L  Q  P  *  L  C  *  K  R  E  L  L  L  S  G  L  K  :  I  R  K  L  H  L  R  R  Q  M  M  S  S  *  *  V  L  G  K  F  W  R  T  T  R  L  L  V  N  V  K  H  L  S  V  N  Y  L  M  V  *  L  P  C  M  L  L  Y  S  H  Q  *  V  N  Q  N  Q  V  G  S  S  Y  L  I  C  G  N  R  H  W  F  Y  P  F  C  N  V  F  I  F  F  E  A  I  G  D </second_frame>
            <third_frame>   L  A  V  R  F  N  A  I  K  Q  K  N  P  C  S  L  I  H  W :   F  R  R  *  K  N  *  E  E  R  G  W  W  A  I  T  N  A  G  G  R  F  D  *  S  *  V  S  F  V  R  W  I  R  C  G  S  I  S  V  L  P  G  F  N  R  S  Y  A  E  R  E  N  C  C  *  V  A  *  R :   *  E  N  C  T  *  G  G  K  *  C  Q  V  D  K  C  W  E  N  F  G  E  Q  Q  D  C  W  S  M  *  N  T  F  R  *  T  T  *  W  C  D  Y  H  A  C  C  C  T  A  I  S  R  *  I  K  I  R  W  V  P  L  T  *  F  V  V  I  D  T  G  F  T  L  S  V  M  Y  L  Y  F  L  R  L  L  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81125" stop="81119"/>
                    <exon start="81026" stop="80847"/>
                    <exon start="78867" stop="78668"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>384</number_coding_nucleotides>
                  <number_encoded_amino_acids>128</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YTGFGGEKTEKKEVGGRSQMPEEDLTEVKFRLFDGSDVGPFQFSPASTVAMLKERIVAEWPKDKKIAPKAANDVKLISAGKILENNKTVGQCKTPFGELPNGVITMHAVVQPSVGKSKSGGFLLLDLW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="85521" PGL_stop="84883"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85521" e_stop="85442"/>
            <exon e_start="85242" e_stop="84883"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.939" e_score="1.000"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="85521" e_stop="85442" e_length="80"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.939">
            <gDNA_intron_boundary i_start="85441" i_stop="85243" i_length="199"/>
          </intron>
          <exon e_serial="2" e_score="0.986">
            <gDNA_exon_boundary e_start="85242" e_stop="84883" e_length="360"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85521" stop="85442"/>
              <exon start="85242" stop="84883"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356407" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TACCTTTTCGACGACCCATGCATGTTGTAGTTGGTAGGCCAATTATGCTGGAGAAAAATCCAGAGCCAACCGTTGAAGAG : GTTTCTGAAGTGCATAGTCGATTTACTGAAGCAATGCAAGAACTATTTGAAAGGCACAAAAAGAGGGTTGGTTATGAAGATCTACCACTGAGAGTTGTTTAATGTTTATATGATAACTCTGCATTAATATGTATCTAAATCTTCTGGTTGTATTACTGCTTTTATTCATTATCTTTTCTTGTTTCCTCCATCTTCTTATGTGCATCTAACTCTAGTCATGGAGGAGAAAAGCAGTATGAATAGAAAAAAATAAATGATTATGAAATTTGCAGTCACTAATATGCTTGGATATGAAGAGAAAGACAGTTTGTATCTTACAAATTAATTTATCTACCATATTATATTTATTGAATTCACACA</gDNA_template>
            <first_frame> Y  L  F  D  D  P  C  M  L  *  L  V  G  Q  L  C  W  R  K  I  Q  S  Q  P  L  K  R :   F  L  K  C  I  V  D  L  L  K  Q  C  K  N  Y  L  K  G  T  K  R  G  L  V  M  K  I  Y  H  *  E  L  F  N  V  Y  M  I  T  L  H  *  Y  V  S  K  S  S  G  C  I  T  A  F  I  H  Y  L  F  L  F  P  P  S  S  Y  V  H  L  T  L  V  M  E  E  K  S  S  M  N  R  K  K  *  M  I  M  K  F  A  V  T  N  M  L  G  Y  E  E  K  D  S  L  Y  L  T  N  *  F  I  Y  H  I  I  F  I  E  F  T   </first_frame>
            <second_frame>  T  F  S  T  T  H  A  C  C  S  W  *  A  N  Y  A  G  E  K  S  R  A  N  R  *  R   : G  F  *  S  A  *  S  I  Y  *  S  N  A  R  T  I  *  K  A  Q  K  E  G  W  L  *  R  S  T  T  E  S  C  L  M  F  I  *  *  L  C  I  N  M  Y  L  N  L  L  V  V  L  L  L  L  F  I  I  F  S  C  F  L  H  L  L  M  C  I  *  L  *  S  W  R  R  K  A  V  *  I  E  K  N  K  *  L  *  N  L  Q  S  L  I  C  L  D  M  K  R  K  T  V  C  I  L  Q  I  N  L  S  T  I  L  Y  L  L  N  S  H  </second_frame>
            <third_frame>   P  F  R  R  P  M  H  V  V  V  G  R  P  I  M  L  E  K  N  P  E  P  T  V  E  E  :  V  S  E  V  H  S  R  F  T  E  A  M  Q  E  L  F  E  R  H  K  K  R  V  G  Y  E  D  L  P  L  R  V  V  *  C  L  Y  D  N  S  A  L  I  C  I  *  I  F  W  L  Y  Y  C  F  Y  S  L  S  F  L  V  S  S  I  F  L  C  A  S  N  S  S  H  G  G  E  K  Q  Y  E  *  K  K  I  N  D  Y  E  I  C  S  H  *  Y  A  W  I  *  R  E  R  Q  F  V  S  Y  K  L  I  Y  L  P  Y  Y  I  Y  *  I  H  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0146O12.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="89877" PGL_stop="86435"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="89877" e_stop="89574"/>
            <exon e_start="89470" e_stop="89396"/>
            <exon e_start="89295" e_stop="89210"/>
            <exon e_start="87564" e_stop="87458"/>
            <exon e_start="87370" e_stop="87215"/>
            <exon e_start="86798" e_stop="86712"/>
            <exon e_start="86449" e_stop="86435"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.791" acc_prob="0.883" e_score="0.987"/>
          <exon-intron don_prob="0.994" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.890" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.052" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.369" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.967" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="89877" e_stop="89574" e_length="304"/>
          </exon>
          <intron i_serial="1" don_prob="0.791" acc_prob="0.883">
            <gDNA_intron_boundary i_start="89573" i_stop="89471" i_length="103"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="89470" e_stop="89396" e_length="75"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.974">
            <gDNA_intron_boundary i_start="89395" i_stop="89296" i_length="100"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="89295" e_stop="89210" e_length="86"/>
          </exon>
          <intron i_serial="3" don_prob="0.952" acc_prob="0.890">
            <gDNA_intron_boundary i_start="89209" i_stop="87565" i_length="1645"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="87564" e_stop="87458" e_length="107"/>
          </exon>
          <intron i_serial="4" don_prob="0.995" acc_prob="0.052">
            <gDNA_intron_boundary i_start="87457" i_stop="87371" i_length="87"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="87370" e_stop="87215" e_length="156"/>
          </exon>
          <intron i_serial="5" don_prob="0.969" acc_prob="0.369">
            <gDNA_intron_boundary i_start="87214" i_stop="86799" i_length="416"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="86798" e_stop="86712" e_length="87"/>
          </exon>
          <intron i_serial="6" don_prob="0.996" acc_prob="0.967">
            <gDNA_intron_boundary i_start="86711" i_stop="86450" i_length="262"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="86449" e_stop="86435" e_length="15"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89877" stop="89574"/>
              <exon start="89470" stop="89396"/>
              <exon start="89295" stop="89210"/>
              <exon start="87564" stop="87458"/>
              <exon start="87370" stop="87280"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E724292" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89687" stop="89574"/>
              <exon start="89470" stop="89396"/>
              <exon start="89295" stop="89210"/>
              <exon start="87564" stop="87458"/>
              <exon start="87370" stop="87264"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311820" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89658" stop="89574"/>
              <exon start="89470" stop="89396"/>
              <exon start="89295" stop="89210"/>
              <exon start="87564" stop="87458"/>
              <exon start="87370" stop="87215"/>
              <exon start="86798" stop="86759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550897" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89658" stop="89574"/>
              <exon start="89470" stop="89396"/>
              <exon start="89295" stop="89210"/>
              <exon start="87564" stop="87458"/>
              <exon start="87370" stop="87215"/>
              <exon start="86798" stop="86759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89658" stop="89574"/>
              <exon start="89470" stop="89396"/>
              <exon start="89295" stop="89210"/>
              <exon start="87564" stop="87458"/>
              <exon start="87370" stop="87215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551447" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89658" stop="89574"/>
              <exon start="89470" stop="89396"/>
              <exon start="89295" stop="89210"/>
              <exon start="87564" stop="87458"/>
              <exon start="87370" stop="87215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688655" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89657" stop="89574"/>
              <exon start="89470" stop="89396"/>
              <exon start="89295" stop="89210"/>
              <exon start="87564" stop="87458"/>
              <exon start="87370" stop="87215"/>
              <exon start="86798" stop="86712"/>
              <exon start="86449" stop="86435"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252852" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89657" stop="89574"/>
              <exon start="89470" stop="89396"/>
              <exon start="89295" stop="89210"/>
              <exon start="87564" stop="87458"/>
              <exon start="87370" stop="87215"/>
              <exon start="86798" stop="86723"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252683" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACTGCATAATTCCCTACTTTCTTTCTATAAATTTATAATCAATTCAGTAATTTCATATTTATTTTTTTCTGTTTTATTCGTTTCGATTTGGATTTTCACCCATGGCTATACAAGAGGATAATTCAATAATTCATCAACAGCCGGCGCCGCCGTCAGCTCCGACGCCGGTGGAGTTTAAAGGGGCAAATTCCGGGTCATTATTGCATACTGTATTGGCGTTGGTCTTATGGCTTGGCTCCGTCCATTTCAACTTCTTAATACTTATTGCTTCCTTTATTTTTCTTCCTTTCTCTAAAACAGTCAT : AGTTATAGGAATATTGCTTATACTTATTCTCATTCCGATTGATGAGAAAAATAATTTTGGGCGAAGATTAGCTAG : GTACATCTGTAAGCATGCTTGTGGCTATTTTCCGGTCCATTTGTATGTAGAGGATATCAAAGCATTTGATCCTAATGAGGCTTACG : TTTTTGGGTATGAACCACATTCTGTTTGGCCTATTGGGGCGGTTGCCCTTGCTGATCTTACAGGTTTCATGCCTCTCCCAAAAATCAAAGTGCTTGCGAGTACTGCT : GTGTTTTATACACCTTTCTTGCGGCATATCTGGACATGGTTAGGACTTGCACCAATAACAAGGAAAAATTTTAAATCCCTCTTGGCATCTGGTTACAGCTGCATCATAGTGCCAGGTGGAGTTCAAGAAACATTCTATATGGAACACGGTTCAGAG : ATTGCTTACCTTCAAAAAAGAAAAGGATTTGTACGAATTGCAATAGAGACGGGCAAACCACTGGTTCCAGTTTTCTGTTTTGGTCAG : ACTGCTATCTATAAA</gDNA_template>
            <first_frame> T  A  *  F  P  T  F  F  L  *  I  Y  N  Q  F  S  N  F  I  F  I  F  F  C  F  I  R  F  D  L  D  F  H  P  W  L  Y  K  R  I  I  Q  *  F  I  N  S  R  R  R  R  Q  L  R  R  R  W  S  L  K  G  Q  I  P  G  H  Y  C  I  L  Y  W  R  W  S  Y  G  L  A  P  S  I  S  T  S  *  Y  L  L  L  P  L  F  F  F  L  S  L  K  Q  S   : *  L  *  E  Y  C  L  Y  L  F  S  F  R  L  M  R  K  I  I  L  G  E  D  *  L   : G  T  S  V  S  M  L  V  A  I  F  R  S  I  C  M  *  R  I  S  K  H  L  I  L  M  R  L  T  :  F  L  G  M  N  H  I  L  F  G  L  L  G  R  L  P  L  L  I  L  Q  V  S  C  L  S  Q  K  S  K  C  L  R  V  L  L :   C  F  I  H  L  S  C  G  I  S  G  H  G  *  D  L  H  Q  *  Q  G  K  I  L  N  P  S  W  H  L  V  T  A  A  S  *  C  Q  V  E  F  K  K  H  S  I  W  N  T  V  Q  R :   L  L  T  F  K  K  E  K  D  L  Y  E  L  Q  *  R  R  A  N  H  W  F  Q  F  S  V  L  V  R :   L  L  S  I   </first_frame>
            <second_frame>  L  H  N  S  L  L  S  F  Y  K  F  I  I  N  S  V  I  S  Y  L  F  F  S  V  L  F  V  S  I  W  I  F  T  H  G  Y  T  R  G  *  F  N  N  S  S  T  A  G  A  A  V  S  S  D  A  G  G  V  *  R  G  K  F  R  V  I  I  A  Y  C  I  G  V  G  L  M  A  W  L  R  P  F  Q  L  L  N  T  Y  C  F  L  Y  F  S  S  F  L  *  N  S  H  :  S  Y  R  N  I  A  Y  T  Y  S  H  S  D  *  *  E  K  *  F  W  A  K  I  S  *  :  V  H  L  *  A  C  L  W  L  F  S  G  P  F  V  C  R  G  Y  Q  S  I  *  S  *  *  G  L  R :   F  W  V  *  T  T  F  C  L  A  Y  W  G  G  C  P  C  *  S  Y  R  F  H  A  S  P  K  N  Q  S  A  C  E  Y  C   : C  V  L  Y  T  F  L  A  A  Y  L  D  M  V  R  T  C  T  N  N  K  E  K  F  *  I  P  L  G  I  W  L  Q  L  H  H  S  A  R  W  S  S  R  N  I  L  Y  G  T  R  F  R   : D  C  L  P  S  K  K  K  R  I  C  T  N  C  N  R  D  G  Q  T  T  G  S  S  F  L  F  W  S   : D  C  Y  L  *  </second_frame>
            <third_frame>   C  I  I  P  Y  F  L  S  I  N  L  *  S  I  Q  *  F  H  I  Y  F  F  L  F  Y  S  F  R  F  G  F  S  P  M  A  I  Q  E  D  N  S  I  I  H  Q  Q  P  A  P  P  S  A  P  T  P  V  E  F  K  G  A  N  S  G  S  L  L  H  T  V  L  A  L  V  L  W  L  G  S  V  H  F  N  F  L  I  L  I  A  S  F  I  F  L  P  F  S  K  T  V  I :   V  I  G  I  L  L  I  L  I  L  I  P  I  D  E  K  N  N  F  G  R  R  L  A  R :   Y  I  C  K  H  A  C  G  Y  F  P  V  H  L  Y  V  E  D  I  K  A  F  D  P  N  E  A  Y   : V  F  G  Y  E  P  H  S  V  W  P  I  G  A  V  A  L  A  D  L  T  G  F  M  P  L  P  K  I  K  V  L  A  S  T  A  :  V  F  Y  T  P  F  L  R  H  I  W  T  W  L  G  L  A  P  I  T  R  K  N  F  K  S  L  L  A  S  G  Y  S  C  I  I  V  P  G  G  V  Q  E  T  F  Y  M  E  H  G  S  E  :  I  A  Y  L  Q  K  R  K  G  F  V  R  I  A  I  E  T  G  K  P  L  V  P  V  F  C  F  G  Q  :  T  A  I  Y  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89827" stop="89574"/>
                    <exon start="89470" stop="89396"/>
                    <exon start="89295" stop="89210"/>
                    <exon start="87564" stop="87458"/>
                    <exon start="87370" stop="87215"/>
                    <exon start="86798" stop="86712"/>
                    <exon start="86449" stop="86435"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>780</number_coding_nucleotides>
                  <number_encoded_amino_acids>260</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FHIYFFLFYSFRFGFSPMAIQEDNSIIHQQPAPPSAPTPVEFKGANSGSLLHTVLALVLWLGSVHFNFLILIASFIFLPFSKTVIVIGILLILILIPIDEKNNFGRRLARYICKHACGYFPVHLYVEDIKAFDPNEAYVFGYEPHSVWPIGAVALADLTGFMPLPKIKVLASTAVFYTPFLRHIWTWLGLAPITRKNFKSLLASGYSCIIVPGGVQETFYMEHGSEIAYLQKRKGFVRIAIETGKPLVPVFCFGQTAIYK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="103365" PGL_stop="100496"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="103365" e_stop="102916"/>
            <exon e_start="102816" e_stop="102700"/>
            <exon e_start="101764" e_stop="100496"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.954" e_score="0.993"/>
          <exon-intron don_prob="0.996" acc_prob="0.695" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="103365" e_stop="102916" e_length="450"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.954">
            <gDNA_intron_boundary i_start="102915" i_stop="102817" i_length="99"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="102816" e_stop="102700" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.695">
            <gDNA_intron_boundary i_start="102699" i_stop="101765" i_length="935"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="101764" e_stop="100496" e_length="1269"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103365" stop="102916"/>
              <exon start="102816" stop="102700"/>
              <exon start="101764" stop="100496"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747324" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103289" stop="102916"/>
              <exon start="102816" stop="102763"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325469" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103259" stop="102916"/>
              <exon start="102816" stop="102700"/>
              <exon start="101764" stop="101636"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319659" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103225" stop="102916"/>
              <exon start="102816" stop="102700"/>
              <exon start="101764" stop="101499"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E737990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103151" stop="102916"/>
              <exon start="102816" stop="102760"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296346" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATATTTTTTTTTTGAGTGAACCTCTTTATCTCTTATTCACAATTGATTGCCATATTCCACCATGAAAATATACAGTGCAAAAAACATCAACAAAAATGGTGGCATTAGCTTCTTCATCTCTCTGCAATTCCCCTTCTTCAATTATCCATTCCTCAAAAACATCTATACCCAATTTCATTACATTCTCTTCCTTAAGTTATTACAAGAAAAGGGGAAAATCGCTTGCAAGTCGTAGCCTTGGAATTGTTGCTGCTACTGAAGGTTCTGTTAACAAATCTAGTGGAAAAGATGAGGAAAAACAAGAAGACCCATCAGTTCCTACATGGGCTAAACCCGGTACGGATGAGCCTCCACCATGGGCTAGAAATGAAGCACAGAAAGATTCTTCAAGCATTCAAGTTCCATTCGTTGTTTATTTGCTTGCTTCTGCTGTCACAGCAATTGCAGCG : ATTGGTTCTATTTTCGAGTACACGAATCAGAAACCTGTGTTTGGAGTTTTGGGTTCAGATAGTGTTTTTTATGCTCCATTGCTTGGGTTCTTTGTGTTCACTGGCATTCCCACTTCT : GCATTCCTTTGGTTCAAATCAGTACAAGTTGCTAACAAGGAGGCTGAGGAACAAGACCGCAGGGATGGATATATGTAACATCTAATATGCAATCTTTAGGTGATATCTGCAGCATCTTATATGCATTTTTCAGATGTTGTTGATGGTTGTTTCCTAAAATACTATCATCGCAAATGAATACTTTCTCGAGGTTTGTTCTTTCTAGAGCAGCATGAGTGTAAAAATTGTCTTCTCAATACCAGTTATTCCGCTTTATCAATTCTAAAAGTCTTTAATCACCAGATTTGACTATTTCCATCTCTCATTTGAAAAAATAGTTTATCGATTTGTGGTTAGACAAGTTACTTGCTGATCTTTTGGCACAACTTGTGTAAGTTATCCACCAATCTGGTGTTGCTTCTTAACTCTTAACATATCGACCTTGGTAAATCACTAATTCTCTATCTTGTCCCTCACTACCAAGACTTAGGAGCTTGAGGCTTTGGTTCACAACGTATTTACTAATAAGTTGTAATAAATAGTCAAAAGAATATTCAAATAGGTCCTGTGAGTTAAATACATAGCATAACTTACAAGTTCAGTCTACTCTCATTTTGATGGTATATCAGCACTTATTCCTTCCTCTTATTTATTAAGTGAACGAAAAAAGTTCACACTCTAATAGCATCATAGCATGTATTGTCTGCTTGCCTTCACATGTCTTTTTGGTTTCAAGTGTTTGTACCTAAGAAACCAGCAAGTCATTTGTTTCTTGGAATTGAGTAGTGATATCTGCAGAATGGTTTGATACTACATTCTACATGTTGTATTTCATTTCTTTGAAATAGGATCGATATAGTTCTTAATCTGAAGACTATCTCTAAAGTATGCTTATATTGCTTTAGTTTACTGTTTCTCATTTTTGTAGTATCTGCCTGAGAATTTCTTGAAAAACTGATCGCGAGCTAGTAAAAAAAAATGTTCAGTCGTTCCACAACATTCTCTCTCCTTCCTCGTTGTGCTATCACACAGAACTCTGAATTTTGCAGTCTACTTCCTTTGAGCTTTTCAACTCTCTGGGGCGGTGAAGTTCATCCATTTCTCCAAGAGAAGAGAAAAGATAGGGAAGCAACATCATATGAAGTCATGTGAACACAACTTTTGTCCCTGTAGGGAGGACAATTGTATTTTTCCCTCAGAAATGAACTTTAATATAGAAATATGTCATGGGCATTTCGAATCAGAAAGGAACTTCAATATAGAAATATGTCATGGGCATTTCAAATATAA</gDNA_template>
            <first_frame> D  I  F  F  L  S  E  P  L  Y  L  L  F  T  I  D  C  H  I  P  P  *  K  Y  T  V  Q  K  T  S  T  K  M  V  A  L  A  S  S  S  L  C  N  S  P  S  S  I  I  H  S  S  K  T  S  I  P  N  F  I  T  F  S  S  L  S  Y  Y  K  K  R  G  K  S  L  A  S  R  S  L  G  I  V  A  A  T  E  G  S  V  N  K  S  S  G  K  D  E  E  K  Q  E  D  P  S  V  P  T  W  A  K  P  G  T  D  E  P  P  P  W  A  R  N  E  A  Q  K  D  S  S  S  I  Q  V  P  F  V  V  Y  L  L  A  S  A  V  T  A  I  A  A  :  I  G  S  I  F  E  Y  T  N  Q  K  P  V  F  G  V  L  G  S  D  S  V  F  Y  A  P  L  L  G  F  F  V  F  T  G  I  P  T  S  :  A  F  L  W  F  K  S  V  Q  V  A  N  K  E  A  E  E  Q  D  R  R  D  G  Y  M  *  H  L  I  C  N  L  *  V  I  S  A  A  S  Y  M  H  F  S  D  V  V  D  G  C  F  L  K  Y  Y  H  R  K  *  I  L  S  R  G  L  F  F  L  E  Q  H  E  C  K  N  C  L  L  N  T  S  Y  S  A  L  S  I  L  K  V  F  N  H  Q  I  *  L  F  P  S  L  I  *  K  N  S  L  S  I  C  G  *  T  S  Y  L  L  I  F  W  H  N  L  C  K  L  S  T  N  L  V  L  L  L  N  S  *  H  I  D  L  G  K  S  L  I  L  Y  L  V  P  H  Y  Q  D  L  G  A  *  G  F  G  S  Q  R  I  Y  *  *  V  V  I  N  S  Q  K  N  I  Q  I  G  P  V  S  *  I  H  S  I  T  Y  K  F  S  L  L  S  F  *  W  Y  I  S  T  Y  S  F  L  L  F  I  K  *  T  K  K  V  H  T  L  I  A  S  *  H  V  L  S  A  C  L  H  M  S  F  W  F  Q  V  F  V  P  K  K  P  A  S  H  L  F  L  G  I  E  *  *  Y  L  Q  N  G  L  I  L  H  S  T  C  C  I  S  F  L  *  N  R  I  D  I  V  L  N  L  K  T  I  S  K  V  C  L  Y  C  F  S  L  L  F  L  I  F  V  V  S  A  *  E  F  L  E  K  L  I  A  S  *  *  K  K  M  F  S  R  S  T  T  F  S  L  L  P  R  C  A  I  T  Q  N  S  E  F  C  S  L  L  P  L  S  F  S  T  L  W  G  G  E  V  H  P  F  L  Q  E  K  R  K  D  R  E  A  T  S  Y  E  V  M  *  T  Q  L  L  S  L  *  G  G  Q  L  Y  F  S  L  R  N  E  L  *  Y  R  N  M  S  W  A  F  R  I  R  K  E  L  Q  Y  R  N  M  S  W  A  F  Q  I  * </first_frame>
            <second_frame>  I  F  F  F  *  V  N  L  F  I  S  Y  S  Q  L  I  A  I  F  H  H  E  N  I  Q  C  K  K  H  Q  Q  K  W  W  H  *  L  L  H  L  S  A  I  P  L  L  Q  L  S  I  P  Q  K  H  L  Y  P  I  S  L  H  S  L  P  *  V  I  T  R  K  G  E  N  R  L  Q  V  V  A  L  E  L  L  L  L  L  K  V  L  L  T  N  L  V  E  K  M  R  K  N  K  K  T  H  Q  F  L  H  G  L  N  P  V  R  M  S  L  H  H  G  L  E  M  K  H  R  K  I  L  Q  A  F  K  F  H  S  L  F  I  C  L  L  L  L  S  Q  Q  L  Q  R :   L  V  L  F  S  S  T  R  I  R  N  L  C  L  E  F  W  V  Q  I  V  F  F  M  L  H  C  L  G  S  L  C  S  L  A  F  P  L  L :   H  S  F  G  S  N  Q  Y  K  L  L  T  R  R  L  R  N  K  T  A  G  M  D  I  C  N  I  *  Y  A  I  F  R  *  Y  L  Q  H  L  I  C  I  F  Q  M  L  L  M  V  V  S  *  N  T  I  I  A  N  E  Y  F  L  E  V  C  S  F  *  S  S  M  S  V  K  I  V  F  S  I  P  V  I  P  L  Y  Q  F  *  K  S  L  I  T  R  F  D  Y  F  H  L  S  F  E  K  I  V  Y  R  F  V  V  R  Q  V  T  C  *  S  F  G  T  T  C  V  S  Y  P  P  I  W  C  C  F  L  T  L  N  I  S  T  L  V  N  H  *  F  S  I  L  S  L  T  T  K  T  *  E  L  E  A  L  V  H  N  V  F  T  N  K  L  *  *  I  V  K  R  I  F  K  *  V  L  *  V  K  Y  I  A  *  L  T  S  S  V  Y  S  H  F  D  G  I  S  A  L  I  P  S  S  Y  L  L  S  E  R  K  K  F  T  L  *  *  H  H  S  M  Y  C  L  L  A  F  T  C  L  F  G  F  K  C  L  Y  L  R  N  Q  Q  V  I  C  F  L  E  L  S  S  D  I  C  R  M  V  *  Y  Y  I  L  H  V  V  F  H  F  F  E  I  G  S  I  *  F  L  I  *  R  L  S  L  K  Y  A  Y  I  A  L  V  Y  C  F  S  F  L  *  Y  L  P  E  N  F  L  K  N  *  S  R  A  S  K  K  K  C  S  V  V  P  Q  H  S  L  S  F  L  V  V  L  S  H  R  T  L  N  F  A  V  Y  F  L  *  A  F  Q  L  S  G  A  V  K  F  I  H  F  S  K  R  R  E  K  I  G  K  Q  H  H  M  K  S  C  E  H  N  F  C  P  C  R  E  D  N  C  I  F  P  S  E  M  N  F  N  I  E  I  C  H  G  H  F  E  S  E  R  N  F  N  I  E  I  C  H  G  H  F  K  Y   </second_frame>
            <third_frame>   Y  F  F  F  E  *  T  S  L  S  L  I  H  N  *  L  P  Y  S  T  M  K  I  Y  S  A  K  N  I  N  K  N  G  G  I  S  F  F  I  S  L  Q  F  P  F  F  N  Y  P  F  L  K  N  I  Y  T  Q  F  H  Y  I  L  F  L  K  L  L  Q  E  K  G  K  I  A  C  K  S  *  P  W  N  C  C  C  Y  *  R  F  C  *  Q  I  *  W  K  R  *  G  K  T  R  R  P  I  S  S  Y  M  G  *  T  R  Y  G  *  A  S  T  M  G  *  K  *  S  T  E  R  F  F  K  H  S  S  S  I  R  C  L  F  A  C  F  C  C  H  S  N  C  S   : D  W  F  Y  F  R  V  H  E  S  E  T  C  V  W  S  F  G  F  R  *  C  F  L  C  S  I  A  W  V  L  C  V  H  W  H  S  H  F   : C  I  P  L  V  Q  I  S  T  S  C  *  Q  G  G  *  G  T  R  P  Q  G  W  I  Y  V  T  S  N  M  Q  S  L  G  D  I  C  S  I  L  Y  A  F  F  R  C  C  *  W  L  F  P  K  I  L  S  S  Q  M  N  T  F  S  R  F  V  L  S  R  A  A  *  V  *  K  L  S  S  Q  Y  Q  L  F  R  F  I  N  S  K  S  L  *  S  P  D  L  T  I  S  I  S  H  L  K  K  *  F  I  D  L  W  L  D  K  L  L  A  D  L  L  A  Q  L  V  *  V  I  H  Q  S  G  V  A  S  *  L  L  T  Y  R  P  W  *  I  T  N  S  L  S  C  P  S  L  P  R  L  R  S  L  R  L  W  F  T  T  Y  L  L  I  S  C  N  K  *  S  K  E  Y  S  N  R  S  C  E  L  N  T  *  H  N  L  Q  V  Q  S  T  L  I  L  M  V  Y  Q  H  L  F  L  P  L  I  Y  *  V  N  E  K  S  S  H  S  N  S  I  I  A  C  I  V  C  L  P  S  H  V  F  L  V  S  S  V  C  T  *  E  T  S  K  S  F  V  S  W  N  *  V  V  I  S  A  E  W  F  D  T  T  F  Y  M  L  Y  F  I  S  L  K  *  D  R  Y  S  S  *  S  E  D  Y  L  *  S  M  L  I  L  L  *  F  T  V  S  H  F  C  S  I  C  L  R  I  S  *  K  T  D  R  E  L  V  K  K  N  V  Q  S  F  H  N  I  L  S  P  S  S  L  C  Y  H  T  E  L  *  I  L  Q  S  T  S  F  E  L  F  N  S  L  G  R  *  S  S  S  I  S  P  R  E  E  K  R  *  G  S  N  I  I  *  S  H  V  N  T  T  F  V  P  V  G  R  T  I  V  F  F  P  Q  K  *  T  L  I  *  K  Y  V  M  G  I  S  N  Q  K  G  T  S  I  *  K  Y  V  M  G  I  S  N  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="103299" stop="102916"/>
                    <exon start="102816" stop="102700"/>
                    <exon start="101764" stop="101687"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>576</number_coding_nucleotides>
                  <number_encoded_amino_acids>192</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KYTVQKTSTKMVALASSSLCNSPSSIIHSSKTSIPNFITFSSLSYYKKRGKSLASRSLGIVAATEGSVNKSSGKDEEKQEDPSVPTWAKPGTDEPPPWARNEAQKDSSSIQVPFVVYLLASAVTAIAAIGSIFEYTNQKPVFGVLGSDSVFYAPLLGFFVFTGIPTSAFLWFKSVQVANKEAEEQDRRDGYM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100722" stop="100498"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AFQLSGAVKFIHFSKRREKIGKQHHMKSCEHNFCPCREDNCIFPSEMNFNIEICHGHFESERNFNIEICHGHFKY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="113800" PGL_stop="114813"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="113800" e_stop="114186"/>
            <exon e_start="114277" e_stop="114374"/>
            <exon e_start="114471" e_stop="114568"/>
            <exon e_start="114660" e_stop="114813"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.267" acc_prob="0.994" e_score="0.995"/>
          <exon-intron don_prob="0.989" acc_prob="0.932" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.975" e_score="0.990"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="113800" e_stop="114186" e_length="387"/>
          </exon>
          <intron i_serial="1" don_prob="0.267" acc_prob="0.994">
            <gDNA_intron_boundary i_start="114187" i_stop="114276" i_length="90"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="114277" e_stop="114374" e_length="98"/>
          </exon>
          <intron i_serial="2" don_prob="0.989" acc_prob="0.932">
            <gDNA_intron_boundary i_start="114375" i_stop="114470" i_length="96"/>
          </intron>
          <exon e_serial="3" e_score="0.990">
            <gDNA_exon_boundary e_start="114471" e_stop="114568" e_length="98"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.975">
            <gDNA_intron_boundary i_start="114569" i_stop="114659" i_length="91"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="114660" e_stop="114813" e_length="154"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113800" stop="114186"/>
              <exon start="114277" stop="114374"/>
              <exon start="114471" stop="114478"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248025" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113803" stop="114186"/>
              <exon start="114277" stop="114374"/>
              <exon start="114471" stop="114500"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248028" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113986" stop="114186"/>
              <exon start="114277" stop="114374"/>
              <exon start="114471" stop="114568"/>
              <exon start="114660" stop="114813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329136" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCCATTTTCTTTTGTCTAAGCAATCGCGAAAAAAATTATTTAAGAGATCGAATATGATTATATGAAATATCTCTTAATTTTATCCGACGCAGTACGTTAATGGAAATATATTTTGTCTACTACTATTACACAGTATACCTGTGACTGAATAATCTCTTTCTCTTTCTCTCTCCCTCTCCTCTTTATTTTCAAATCATTCTCTCTCTCTGTGTGTCTTGTTCTGCTATAAAAAACCTCATCTTTTTTTTTTTCATCTTGTAGTTGATAATACATTCTTTTACTAGCCTTATACATCAAGATAGGAGATGGGTGTTTCAAAAAAGACTCTTTTTTTACTATTTGTTAGTGTTTTTCTTGGAGAAATTAGTCTCTGCTCTTCTACCAAG : TTATATGTGGTGTACATGGGAAGCAAAGATAGTGATGAGCATCAAGATGAGATTTTGAGGCAAAACCATCAAATGCTTACTGATATTCATGGAGGAAA : TGTTGAACAAGCCAAGAGTTCTCATGTATACAGTTATAGACATGGTTTTAAAGGCTTTGCAGCCAAGTTGACTGAGAAACAGGCTTCTGAAATATCTA : AAATGCCTGGTGTGGTATCTGTATTTCCAAATACTAAGAGAAACCTGCATACAACTCATTCATGGGATTTTATGGGGCTCAGTGAAGATGAAACAATGGAAATCCCAGGTTTTTCCACCAAGAACCAAGTTAATGTAATCATTGGTTTCATTGA</gDNA_template>
            <first_frame> F  H  F  L  L  S  K  Q  S  R  K  K  L  F  K  R  S  N  M  I  I  *  N  I  S  *  F  Y  P  T  Q  Y  V  N  G  N  I  F  C  L  L  L  L  H  S  I  P  V  T  E  *  S  L  S  L  S  L  S  L  S  S  L  F  S  N  H  S  L  S  L  C  V  L  F  C  Y  K  K  P  H  L  F  F  F  H  L  V  V  D  N  T  F  F  Y  *  P  Y  T  S  R  *  E  M  G  V  S  K  K  T  L  F  L  L  F  V  S  V  F  L  G  E  I  S  L  C  S  S  T  K  :  L  Y  V  V  Y  M  G  S  K  D  S  D  E  H  Q  D  E  I  L  R  Q  N  H  Q  M  L  T  D  I  H  G  G  N :   V  E  Q  A  K  S  S  H  V  Y  S  Y  R  H  G  F  K  G  F  A  A  K  L  T  E  K  Q  A  S  E  I  S   : K  M  P  G  V  V  S  V  F  P  N  T  K  R  N  L  H  T  T  H  S  W  D  F  M  G  L  S  E  D  E  T  M  E  I  P  G  F  S  T  K  N  Q  V  N  V  I  I  G  F  I   </first_frame>
            <second_frame>  S  I  F  F  C  L  S  N  R  E  K  N  Y  L  R  D  R  I  *  L  Y  E  I  S  L  N  F  I  R  R  S  T  L  M  E  I  Y  F  V  Y  Y  Y  Y  T  V  Y  L  *  L  N  N  L  F  L  F  L  S  P  S  P  L  Y  F  Q  I  I  L  S  L  C  V  S  C  S  A  I  K  N  L  I  F  F  F  F  I  L  *  L  I  I  H  S  F  T  S  L  I  H  Q  D  R  R  W  V  F  Q  K  R  L  F  F  Y  Y  L  L  V  F  F  L  E  K  L  V  S  A  L  L  P  S :   Y  M  W  C  T  W  E  A  K  I  V  M  S  I  K  M  R  F  *  G  K  T  I  K  C  L  L  I  F  M  E  E   : M  L  N  K  P  R  V  L  M  Y  T  V  I  D  M  V  L  K  A  L  Q  P  S  *  L  R  N  R  L  L  K  Y  L  :  K  C  L  V  W  Y  L  Y  F  Q  I  L  R  E  T  C  I  Q  L  I  H  G  I  L  W  G  S  V  K  M  K  Q  W  K  S  Q  V  F  P  P  R  T  K  L  M  *  S  L  V  S  L  </second_frame>
            <third_frame>   P  F  S  F  V  *  A  I  A  K  K  I  I  *  E  I  E  Y  D  Y  M  K  Y  L  L  I  L  S  D  A  V  R  *  W  K  Y  I  L  S  T  T  I  T  Q  Y  T  C  D  *  I  I  S  F  S  F  S  L  P  L  L  F  I  F  K  S  F  S  L  S  V  C  L  V  L  L  *  K  T  S  S  F  F  F  S  S  C  S  *  *  Y  I  L  L  L  A  L  Y  I  K  I  G  D  G  C  F  K  K  D  S  F  F  T  I  C  *  C  F  S  W  R  N  *  S  L  L  F  Y  Q   : V  I  C  G  V  H  G  K  Q  R  *  *  *  A  S  R  *  D  F  E  A  K  P  S  N  A  Y  *  Y  S  W  R  K  :  C  *  T  S  Q  E  F  S  C  I  Q  L  *  T  W  F  *  R  L  C  S  Q  V  D  *  E  T  G  F  *  N  I  * :   N  A  W  C  G  I  C  I  S  K  Y  *  E  K  P  A  Y  N  S  F  M  G  F  Y  G  A  Q  *  R  *  N  N  G  N  P  R  F  F  H  Q  E  P  S  *  C  N  H  W  F  H  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="114103" stop="114186"/>
                    <exon start="114277" stop="114374"/>
                    <exon start="114471" stop="114568"/>
                    <exon start="114660" stop="114811"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>432</number_coding_nucleotides>
                  <number_encoded_amino_acids>144</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EMGVSKKTLFLLFVSVFLGEISLCSSTKLYVVYMGSKDSDEHQDEILRQNHQMLTDIHGGNVEQAKSSHVYSYRHGFKGFAAKLTEKQASEISKMPGVVSVFPNTKRNLHTTHSWDFMGLSEDETMEIPGFSTKNQVNVIIGFI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="115376" PGL_stop="118283"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="115376" e_stop="115487"/>
            <exon e_start="115573" e_stop="116095"/>
            <exon e_start="116176" e_stop="116282"/>
            <exon e_start="116365" e_stop="116810"/>
            <exon e_start="117059" e_stop="117245"/>
            <exon e_start="117455" e_stop="118283"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.904" acc_prob="0.766" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.953" e_score="1.000"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="115376" e_stop="115487" e_length="112"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.986">
            <gDNA_intron_boundary i_start="115488" i_stop="115572" i_length="85"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="115573" e_stop="116095" e_length="523"/>
          </exon>
          <intron i_serial="2" don_prob="0.904" acc_prob="0.766">
            <gDNA_intron_boundary i_start="116096" i_stop="116175" i_length="80"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="116176" e_stop="116282" e_length="107"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.000">
            <gDNA_intron_boundary i_start="116283" i_stop="116364" i_length="82"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="116365" e_stop="116810" e_length="446"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.990">
            <gDNA_intron_boundary i_start="116811" i_stop="117058" i_length="248"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="117059" e_stop="117245" e_length="187"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.953">
            <gDNA_intron_boundary i_start="117246" i_stop="117454" i_length="209"/>
          </intron>
          <exon e_serial="6" e_score="0.987">
            <gDNA_exon_boundary e_start="117455" e_stop="118283" e_length="829"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115376" stop="115487"/>
              <exon start="115573" stop="115961"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335477" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115412" stop="115487"/>
              <exon start="115573" stop="116022"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337672" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115637" stop="116095"/>
              <exon start="116176" stop="116282"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396406" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115638" stop="116095"/>
              <exon start="116176" stop="116255"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276528" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115888" stop="116095"/>
              <exon start="116176" stop="116282"/>
              <exon start="116365" stop="116605"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245226" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116180" stop="116282"/>
              <exon start="116365" stop="116810"/>
              <exon start="117059" stop="117166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345375" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116737" stop="116810"/>
              <exon start="117059" stop="117245"/>
              <exon start="117455" stop="117831"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273399" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116792" stop="116810"/>
              <exon start="117059" stop="117245"/>
              <exon start="117455" stop="117707"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244877" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116792" stop="116810"/>
              <exon start="117059" stop="117245"/>
              <exon start="117455" stop="117585"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244875" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117162" stop="117245"/>
              <exon start="117455" stop="117792"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237676" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117673" stop="118283"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744759" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAATTTGGCCTGAGTCTCCAAGTTTTAGGGACACCCACATGCCTCCAGTGCCTGCTGGATGGAAAGGACAATGCCAATCAGGGGAAGCATTCAATGCCTCAATATGCAACAG : GAAAATAATTGGGGCAAGATATTATATGAGTGGCTATGCAGCTGAAGAAGATGAAAAGATCATGTTCAAGTCTGCCAGGGACAGTTCTGGTCATGGAAGTCATACAGCTTCAACTGCTGCTGGGCGTTATGTAGCTGATATGAATTACAAAGGTTTGGCATCTGGAGGAGCCAGAGGTGGTGCCCCAATGGCCAGGATAGCAGTGTACAAAACCTGCTGGAGTTCTGGTTGCTATGATGTTGATTTGTTGGCTGCATTTGATGATGCAATTAGAGATGGGGTTCATGTCATTTCTATATCTTTGGGCCCAGATGCTCCCCAAGGAGATTATTTTAGTGATGCAATTTCTGTGGGGTCATTTCATGCTGTTAGCCGTGGGATACTTGTAGTGGCCTCCGTTGGAAATGAAGGAACCTCTGGTTCAGCCACAAATTTAGCTCCTTGGATGATCACAGTTGCAGCCAGTTCAACCGATAGAGATTTTACATCTGATGTTTTACTAGGAAATAGAGTTCAACTCACG : GGTGAAAGTCTTAGCTTATCTCAAATGCATACATCTGCAAAAATCATACCTGCTTCTGAAGCTTATGCTGGATACTTCACTCCTTATCAATCCAGGTGAAGCAGAAG : TTATTGCTTAGATAGTTCTTTGAATAGAACTAAGGCCAAAGGGAAGGTTCTTGTGTGTCGACATGCTGGAAGCTCAAGTGAGTCAAAGCTGGAGAAAAGCAATATAGTTAAACAAGCTGGTGGAGTTGGGATGATCCTTATTGATGAAGCAGACAAGGGTGTGGCTATTCCCTTCTCCATTCCAGCAGCAACTGTTGGGCAAAAGATTGGAAAAAAGATCCTAGCTTACATTAATAATACACGGTTCACTTCTTTGTTAGTGGCTGTTGATATTTGTTTTTATTGTTCTTTGATGTTGTTAGCAATCATCTCATCTCTTTTATATTTACAGCCTCCCTACTGCAAGAATTCTCTCTGCTAAAACTGTTTTGGGAGCTCAACCTGCTCCTCGAGTAACAGCATTTTCTTCAAGAGGTCCTAATTCTCTAACACCAGAAATTTTGAAG : CCTGATATTACTGCTCCCGGTTTAAATATCCTGGCAGCATGGTCCCCAGCAATGTCTAGGTTGAAGTTCAACATACTCTCTGGAACCTCCATGGCTTGCCCTCACATATCAGGAGTTGTTGCCTTGTTAAAAGCCGTGCATCCATCATGGTCTCCCTCTGCAATCAAATCAGCCATCATGACAACAG : CCAAACTATCAGATATGCATCACAAACCCATAATAGTAGATCCTGAAGGGAAGAAGGCTAATCCATTTGATTTTGGTTCTGGATTTGTTAACCCCACGAAAGTCCTCAATCCTGGTCTGATATATGATGCACAACCAGAAGATTACAGAGCATTTCTTTGTTCAATTGGTTATGACGAGAAATCTCTGCATCTAATTACAAGGGACAACAGAACGTGTGATCAAACCTTTGCATCGCCAAATGAACTAAATTATCCCTCCATCACAGTACCAAACCTCAGAAACAATTACTCAGTATCTCGAACTGTCACAAATGTGGGAAAGTCAAGGAGTACTTACAAGGCAGTTATATTTGCACCAAAGGGTATCAATGTTACTGTGGTGCCGCGAAGATTAGCCTTCACTAGATATTACCAGAAGATGAATTTCACAGTGACTTTCAAAGTGGCTGCACCTACACAGGGATATGTCTTTGGGTCCTTGTCATGGAGGAACAAAAGAACATGGGTAACATCTCCACTTGTTGTCAGAGTGGCACATTCCAATATGGGTACTGTGGTATAGTTCAGCTGCAGTGCTATTTATTTGTGTTATATAAGGTAAGTAACAAGATATTGCAACCAGTAGCTGCTGAAAATGGTTGCATGAAGAAGCCAACACAAAATTCTTAGAAGAATACATGTAATTAGTAGCAGAATACAAATAATTAGTAATTCTTTATTCTATTTGTCCTTTAGTTTTGAGTTTTGGTTCTTGCTACCTAGTCAGGTTTTACTAATAGGGATACTGCAAATTCTTTTACTTGTCTAGTAATTGCATTATGTATTGGC</gDNA_template>
            <first_frame> E  F  G  L  S  L  Q  V  L  G  T  P  T  C  L  Q  C  L  L  D  G  K  D  N  A  N  Q  G  K  H  S  M  P  Q  Y  A  T   : G  K  *  L  G  Q  D  I  I  *  V  A  M  Q  L  K  K  M  K  R  S  C  S  S  L  P  G  T  V  L  V  M  E  V  I  Q  L  Q  L  L  L  G  V  M  *  L  I  *  I  T  K  V  W  H  L  E  E  P  E  V  V  P  Q  W  P  G  *  Q  C  T  K  P  A  G  V  L  V  A  M  M  L  I  C  W  L  H  L  M  M  Q  L  E  M  G  F  M  S  F  L  Y  L  W  A  Q  M  L  P  K  E  I  I  L  V  M  Q  F  L  W  G  H  F  M  L  L  A  V  G  Y  L  *  W  P  P  L  E  M  K  E  P  L  V  Q  P  Q  I  *  L  L  G  *  S  Q  L  Q  P  V  Q  P  I  E  I  L  H  L  M  F  Y  *  E  I  E  F  N  S  R :   V  K  V  L  A  Y  L  K  C  I  H  L  Q  K  S  Y  L  L  L  K  L  M  L  D  T  S  L  L  I  N  P  G  E  A  E   : V  I  A  *  I  V  L  *  I  E  L  R  P  K  G  R  F  L  C  V  D  M  L  E  A  Q  V  S  Q  S  W  R  K  A  I  *  L  N  K  L  V  E  L  G  *  S  L  L  M  K  Q  T  R  V  W  L  F  P  S  P  F  Q  Q  Q  L  L  G  K  R  L  E  K  R  S  *  L  T  L  I  I  H  G  S  L  L  C  *  W  L  L  I  F  V  F  I  V  L  *  C  C  *  Q  S  S  H  L  F  Y  I  Y  S  L  P  T  A  R  I  L  S  A  K  T  V  L  G  A  Q  P  A  P  R  V  T  A  F  S  S  R  G  P  N  S  L  T  P  E  I  L  K  :  P  D  I  T  A  P  G  L  N  I  L  A  A  W  S  P  A  M  S  R  L  K  F  N  I  L  S  G  T  S  M  A  C  P  H  I  S  G  V  V  A  L  L  K  A  V  H  P  S  W  S  P  S  A  I  K  S  A  I  M  T  T   : A  K  L  S  D  M  H  H  K  P  I  I  V  D  P  E  G  K  K  A  N  P  F  D  F  G  S  G  F  V  N  P  T  K  V  L  N  P  G  L  I  Y  D  A  Q  P  E  D  Y  R  A  F  L  C  S  I  G  Y  D  E  K  S  L  H  L  I  T  R  D  N  R  T  C  D  Q  T  F  A  S  P  N  E  L  N  Y  P  S  I  T  V  P  N  L  R  N  N  Y  S  V  S  R  T  V  T  N  V  G  K  S  R  S  T  Y  K  A  V  I  F  A  P  K  G  I  N  V  T  V  V  P  R  R  L  A  F  T  R  Y  Y  Q  K  M  N  F  T  V  T  F  K  V  A  A  P  T  Q  G  Y  V  F  G  S  L  S  W  R  N  K  R  T  W  V  T  S  P  L  V  V  R  V  A  H  S  N  M  G  T  V  V  *  F  S  C  S  A  I  Y  L  C  Y  I  R  *  V  T  R  Y  C  N  Q  *  L  L  K  M  V  A  *  R  S  Q  H  K  I  L  R  R  I  H  V  I  S  S  R  I  Q  I  I  S  N  S  L  F  Y  L  S  F  S  F  E  F  W  F  L  L  P  S  Q  V  L  L  I  G  I  L  Q  I  L  L  L  V  *  *  L  H  Y  V  L   </first_frame>
            <second_frame>  N  L  A  *  V  S  K  F  *  G  H  P  H  A  S  S  A  C  W  M  E  R  T  M  P  I  R  G  S  I  Q  C  L  N  M  Q  Q  :  E  N  N  W  G  K  I  L  Y  E  W  L  C  S  *  R  R  *  K  D  H  V  Q  V  C  Q  G  Q  F  W  S  W  K  S  Y  S  F  N  C  C  W  A  L  C  S  *  Y  E  L  Q  R  F  G  I  W  R  S  Q  R  W  C  P  N  G  Q  D  S  S  V  Q  N  L  L  E  F  W  L  L  *  C  *  F  V  G  C  I  *  *  C  N  *  R  W  G  S  C  H  F  Y  I  F  G  P  R  C  S  P  R  R  L  F  *  *  C  N  F  C  G  V  I  S  C  C  *  P  W  D  T  C  S  G  L  R  W  K  *  R  N  L  W  F  S  H  K  F  S  S  L  D  D  H  S  C  S  Q  F  N  R  *  R  F  Y  I  *  C  F  T  R  K  *  S  S  T  H   : G  *  K  S  *  L  I  S  N  A  Y  I  C  K  N  H  T  C  F  *  S  L  C  W  I  L  H  S  L  S  I  Q  V  K  Q  K  :  L  L  L  R  *  F  F  E  *  N  *  G  Q  R  E  G  S  C  V  S  T  C  W  K  L  K  *  V  K  A  G  E  K  Q  Y  S  *  T  S  W  W  S  W  D  D  P  Y  *  *  S  R  Q  G  C  G  Y  S  L  L  H  S  S  S  N  C  W  A  K  D  W  K  K  D  P  S  L  H  *  *  Y  T  V  H  F  F  V  S  G  C  *  Y  L  F  L  L  F  F  D  V  V  S  N  H  L  I  S  F  I  F  T  A  S  L  L  Q  E  F  S  L  L  K  L  F  W  E  L  N  L  L  L  E  *  Q  H  F  L  Q  E  V  L  I  L  *  H  Q  K  F  *  S :   L  I  L  L  L  P  V  *  I  S  W  Q  H  G  P  Q  Q  C  L  G  *  S  S  T  Y  S  L  E  P  P  W  L  A  L  T  Y  Q  E  L  L  P  C  *  K  P  C  I  H  H  G  L  P  L  Q  S  N  Q  P  S  *  Q  Q  :  P  N  Y  Q  I  C  I  T  N  P  *  *  *  I  L  K  G  R  R  L  I  H  L  I  L  V  L  D  L  L  T  P  R  K  S  S  I  L  V  *  Y  M  M  H  N  Q  K  I  T  E  H  F  F  V  Q  L  V  M  T  R  N  L  C  I  *  L  Q  G  T  T  E  R  V  I  K  P  L  H  R  Q  M  N  *  I  I  P  P  S  Q  Y  Q  T  S  E  T  I  T  Q  Y  L  E  L  S  Q  M  W  E  S  Q  G  V  L  T  R  Q  L  Y  L  H  Q  R  V  S  M  L  L  W  C  R  E  D  *  P  S  L  D  I  T  R  R  *  I  S  Q  *  L  S  K  W  L  H  L  H  R  D  M  S  L  G  P  C  H  G  G  T  K  E  H  G  *  H  L  H  L  L  S  E  W  H  I  P  I  W  V  L  W  Y  S  S  A  A  V  L  F  I  C  V  I  *  G  K  *  Q  D  I  A  T  S  S  C  *  K  W  L  H  E  E  A  N  T  K  F  L  E  E  Y  M  *  L  V  A  E  Y  K  *  L  V  I  L  Y  S  I  C  P  L  V  L  S  F  G  S  C  Y  L  V  R  F  Y  *  *  G  Y  C  K  F  F  Y  L  S  S  N  C  I  M  Y  W  </second_frame>
            <third_frame>   I  W  P  E  S  P  S  F  R  D  T  H  M  P  P  V  P  A  G  W  K  G  Q  C  Q  S  G  E  A  F  N  A  S  I  C  N  R :   K  I  I  G  A  R  Y  Y  M  S  G  Y  A  A  E  E  D  E  K  I  M  F  K  S  A  R  D  S  S  G  H  G  S  H  T  A  S  T  A  A  G  R  Y  V  A  D  M  N  Y  K  G  L  A  S  G  G  A  R  G  G  A  P  M  A  R  I  A  V  Y  K  T  C  W  S  S  G  C  Y  D  V  D  L  L  A  A  F  D  D  A  I  R  D  G  V  H  V  I  S  I  S  L  G  P  D  A  P  Q  G  D  Y  F  S  D  A  I  S  V  G  S  F  H  A  V  S  R  G  I  L  V  V  A  S  V  G  N  E  G  T  S  G  S  A  T  N  L  A  P  W  M  I  T  V  A  A  S  S  T  D  R  D  F  T  S  D  V  L  L  G  N  R  V  Q  L  T  :  G  E  S  L  S  L  S  Q  M  H  T  S  A  K  I  I  P  A  S  E  A  Y  A  G  Y  F  T  P  Y  Q  S  R  *  S  R  S :   Y  C  L  D  S  S  L  N  R  T  K  A  K  G  K  V  L  V  C  R  H  A  G  S  S  S  E  S  K  L  E  K  S  N  I  V  K  Q  A  G  G  V  G  M  I  L  I  D  E  A  D  K  G  V  A  I  P  F  S  I  P  A  A  T  V  G  Q  K  I  G  K  K  I  L  A  Y  I  N  N  T  R  F  T  S  L  L  V  A  V  D  I  C  F  Y  C  S  L  M  L  L  A  I  I  S  S  L  L  Y  L  Q  P  P  Y  C  K  N  S  L  C  *  N  C  F  G  S  S  T  C  S  S  S  N  S  I  F  F  K  R  S  *  F  S  N  T  R  N  F  E   : A  *  Y  Y  C  S  R  F  K  Y  P  G  S  M  V  P  S  N  V  *  V  E  V  Q  H  T  L  W  N  L  H  G  L  P  S  H  I  R  S  C  C  L  V  K  S  R  A  S  I  M  V  S  L  C  N  Q  I  S  H  H  D  N  S :   Q  T  I  R  Y  A  S  Q  T  H  N  S  R  S  *  R  E  E  G  *  S  I  *  F  W  F  W  I  C  *  P  H  E  S  P  Q  S  W  S  D  I  *  C  T  T  R  R  L  Q  S  I  S  L  F  N  W  L  *  R  E  I  S  A  S  N  Y  K  G  Q  Q  N  V  *  S  N  L  C  I  A  K  *  T  K  L  S  L  H  H  S  T  K  P  Q  K  Q  L  L  S  I  S  N  C  H  K  C  G  K  V  K  E  Y  L  Q  G  S  Y  I  C  T  K  G  Y  Q  C  Y  C  G  A  A  K  I  S  L  H  *  I  L  P  E  D  E  F  H  S  D  F  Q  S  G  C  T  Y  T  G  I  C  L  W  V  L  V  M  E  E  Q  K  N  M  G  N  I  S  T  C  C  Q  S  G  T  F  Q  Y  G  Y  C  G  I  V  Q  L  Q  C  Y  L  F  V  L  Y  K  V  S  N  K  I  L  Q  P  V  A  A  E  N  G  C  M  K  K  P  T  Q  N  S  *  K  N  T  C  N  *  *  Q  N  T  N  N  *  *  F  F  I  L  F  V  L  *  F  *  V  L  V  L  A  T  *  S  G  F  T  N  R  D  T  A  N  S  F  T  C  L  V  I  A  L  C  I  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="116667" stop="116810"/>
                    <exon start="117059" stop="117245"/>
                    <exon start="117455" stop="118017"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>891</number_coding_nucleotides>
                  <number_encoded_amino_acids>297</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QSSHLFYIYSLPTARILSAKTVLGAQPAPRVTAFSSRGPNSLTPEILKPDITAPGLNILAAWSPAMSRLKFNILSGTSMACPHISGVVALLKAVHPSWSPSAIKSAIMTTAKLSDMHHKPIIVDPEGKKANPFDFGSGFVNPTKVLNPGLIYDAQPEDYRAFLCSIGYDEKSLHLITRDNRTCDQTFASPNELNYPSITVPNLRNNYSVSRTVTNVGKSRSTYKAVIFAPKGINVTVVPRRLAFTRYYQKMNFTVTFKVAAPTQGYVFGSLSWRNKRTWVTSPLVVRVAHSNMGTVV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="115378" stop="115487"/>
                    <exon start="115573" stop="116095"/>
                    <exon start="116176" stop="116274"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>729</number_coding_nucleotides>
                  <number_encoded_amino_acids>243</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IWPESPSFRDTHMPPVPAGWKGQCQSGEAFNASICNRKIIGARYYMSGYAAEEDEKIMFKSARDSSGHGSHTASTAAGRYVADMNYKGLASGGARGGAPMARIAVYKTCWSSGCYDVDLLAAFDDAIRDGVHVISISLGPDAPQGDYFSDAISVGSFHAVSRGILVVASVGNEGTSGSATNLAPWMITVAASSTDRDFTSDVLLGNRVQLTGESLSLSQMHTSAKIIPASEAYAGYFTPYQSR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="115376" e_stop="115487"/>
            <exon e_start="115573" e_stop="116095"/>
            <exon e_start="116176" e_stop="116437"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.904" acc_prob="0.766" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="115376" e_stop="115487" e_length="112"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.986">
            <gDNA_intron_boundary i_start="115488" i_stop="115572" i_length="85"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="115573" e_stop="116095" e_length="523"/>
          </exon>
          <intron i_serial="2" don_prob="0.904" acc_prob="0.766">
            <gDNA_intron_boundary i_start="116096" i_stop="116175" i_length="80"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="116176" e_stop="116437" e_length="262"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115376" stop="115487"/>
              <exon start="115573" stop="115961"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335477" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115412" stop="115487"/>
              <exon start="115573" stop="116022"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337672" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115637" stop="116095"/>
              <exon start="116176" stop="116282"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396406" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115638" stop="116095"/>
              <exon start="116176" stop="116255"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276528" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115796" stop="116095"/>
              <exon start="116176" stop="116437"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246938" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAATTTGGCCTGAGTCTCCAAGTTTTAGGGACACCCACATGCCTCCAGTGCCTGCTGGATGGAAAGGACAATGCCAATCAGGGGAAGCATTCAATGCCTCAATATGCAACAG : GAAAATAATTGGGGCAAGATATTATATGAGTGGCTATGCAGCTGAAGAAGATGAAAAGATCATGTTCAAGTCTGCCAGGGACAGTTCTGGTCATGGAAGTCATACAGCTTCAACTGCTGCTGGGCGTTATGTAGCTGATATGAATTACAAAGGTTTGGCATCTGGAGGAGCCAGAGGTGGTGCCCCAATGGCCAGGATAGCAGTGTACAAAACCTGCTGGAGTTCTGGTTGCTATGATGTTGATTTGTTGGCTGCATTTGATGATGCAATTAGAGATGGGGTTCATGTCATTTCTATATCTTTGGGCCCAGATGCTCCCCAAGGAGATTATTTTAGTGATGCAATTTCTGTGGGGTCATTTCATGCTGTTAGCCGTGGGATACTTGTAGTGGCCTCCGTTGGAAATGAAGGAACCTCTGGTTCAGCCACAAATTTAGCTCCTTGGATGATCACAGTTGCAGCCAGTTCAACCGATAGAGATTTTACATCTGATGTTTTACTAGGAAATAGAGTTCAACTCACG : GGTGAAAGTCTTAGCTTATCTCAAATGCATACATCTGCAAAAATCATACCTGCTTCTGAAGCTTATGCTGGATACTTCACTCCTTATCAATCCAGGTGAAGCAGAAGGTACTTAACTGTTTGTTAATTGTAGATATGTATGCATTGACAATTATATTAAAGTACTTTTCGTTCCTATCTTTTCCACTAGTTATTGCTTAGATAGTTCTTTGAATAGAACTAAGGCCAAAGGGAAGGTTCTTGTGTGTCGACATGCTGGAAGC</gDNA_template>
            <first_frame> E  F  G  L  S  L  Q  V  L  G  T  P  T  C  L  Q  C  L  L  D  G  K  D  N  A  N  Q  G  K  H  S  M  P  Q  Y  A  T   : G  K  *  L  G  Q  D  I  I  *  V  A  M  Q  L  K  K  M  K  R  S  C  S  S  L  P  G  T  V  L  V  M  E  V  I  Q  L  Q  L  L  L  G  V  M  *  L  I  *  I  T  K  V  W  H  L  E  E  P  E  V  V  P  Q  W  P  G  *  Q  C  T  K  P  A  G  V  L  V  A  M  M  L  I  C  W  L  H  L  M  M  Q  L  E  M  G  F  M  S  F  L  Y  L  W  A  Q  M  L  P  K  E  I  I  L  V  M  Q  F  L  W  G  H  F  M  L  L  A  V  G  Y  L  *  W  P  P  L  E  M  K  E  P  L  V  Q  P  Q  I  *  L  L  G  *  S  Q  L  Q  P  V  Q  P  I  E  I  L  H  L  M  F  Y  *  E  I  E  F  N  S  R :   V  K  V  L  A  Y  L  K  C  I  H  L  Q  K  S  Y  L  L  L  K  L  M  L  D  T  S  L  L  I  N  P  G  E  A  E  G  T  *  L  F  V  N  C  R  Y  V  C  I  D  N  Y  I  K  V  L  F  V  P  I  F  S  T  S  Y  C  L  D  S  S  L  N  R  T  K  A  K  G  K  V  L  V  C  R  H  A  G  S </first_frame>
            <second_frame>  N  L  A  *  V  S  K  F  *  G  H  P  H  A  S  S  A  C  W  M  E  R  T  M  P  I  R  G  S  I  Q  C  L  N  M  Q  Q  :  E  N  N  W  G  K  I  L  Y  E  W  L  C  S  *  R  R  *  K  D  H  V  Q  V  C  Q  G  Q  F  W  S  W  K  S  Y  S  F  N  C  C  W  A  L  C  S  *  Y  E  L  Q  R  F  G  I  W  R  S  Q  R  W  C  P  N  G  Q  D  S  S  V  Q  N  L  L  E  F  W  L  L  *  C  *  F  V  G  C  I  *  *  C  N  *  R  W  G  S  C  H  F  Y  I  F  G  P  R  C  S  P  R  R  L  F  *  *  C  N  F  C  G  V  I  S  C  C  *  P  W  D  T  C  S  G  L  R  W  K  *  R  N  L  W  F  S  H  K  F  S  S  L  D  D  H  S  C  S  Q  F  N  R  *  R  F  Y  I  *  C  F  T  R  K  *  S  S  T  H   : G  *  K  S  *  L  I  S  N  A  Y  I  C  K  N  H  T  C  F  *  S  L  C  W  I  L  H  S  L  S  I  Q  V  K  Q  K  V  L  N  C  L  L  I  V  D  M  Y  A  L  T  I  I  L  K  Y  F  S  F  L  S  F  P  L  V  I  A  *  I  V  L  *  I  E  L  R  P  K  G  R  F  L  C  V  D  M  L  E   </second_frame>
            <third_frame>   I  W  P  E  S  P  S  F  R  D  T  H  M  P  P  V  P  A  G  W  K  G  Q  C  Q  S  G  E  A  F  N  A  S  I  C  N  R :   K  I  I  G  A  R  Y  Y  M  S  G  Y  A  A  E  E  D  E  K  I  M  F  K  S  A  R  D  S  S  G  H  G  S  H  T  A  S  T  A  A  G  R  Y  V  A  D  M  N  Y  K  G  L  A  S  G  G  A  R  G  G  A  P  M  A  R  I  A  V  Y  K  T  C  W  S  S  G  C  Y  D  V  D  L  L  A  A  F  D  D  A  I  R  D  G  V  H  V  I  S  I  S  L  G  P  D  A  P  Q  G  D  Y  F  S  D  A  I  S  V  G  S  F  H  A  V  S  R  G  I  L  V  V  A  S  V  G  N  E  G  T  S  G  S  A  T  N  L  A  P  W  M  I  T  V  A  A  S  S  T  D  R  D  F  T  S  D  V  L  L  G  N  R  V  Q  L  T  :  G  E  S  L  S  L  S  Q  M  H  T  S  A  K  I  I  P  A  S  E  A  Y  A  G  Y  F  T  P  Y  Q  S  R  *  S  R  R  Y  L  T  V  C  *  L  *  I  C  M  H  *  Q  L  Y  *  S  T  F  R  S  Y  L  F  H  *  L  L  L  R  *  F  F  E  *  N  *  G  Q  R  E  G  S  C  V  S  T  C  W  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="115378" stop="115487"/>
                    <exon start="115573" stop="116095"/>
                    <exon start="116176" stop="116274"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>729</number_coding_nucleotides>
                  <number_encoded_amino_acids>243</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IWPESPSFRDTHMPPVPAGWKGQCQSGEAFNASICNRKIIGARYYMSGYAAEEDEKIMFKSARDSSGHGSHTASTAAGRYVADMNYKGLASGGARGGAPMARIAVYKTCWSSGCYDVDLLAAFDDAIRDGVHVISISLGPDAPQGDYFSDAISVGSFHAVSRGILVVASVGNEGTSGSATNLAPWMITVAASSTDRDFTSDVLLGNRVQLTGESLSLSQMHTSAKIIPASEAYAGYFTPYQSR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="117057" e_stop="117245"/>
            <exon e_start="117455" e_stop="118283"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.953" e_score="1.000"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="117057" e_stop="117245" e_length="189"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.953">
            <gDNA_intron_boundary i_start="117246" i_stop="117454" i_length="209"/>
          </intron>
          <exon e_serial="2" e_score="0.987">
            <gDNA_exon_boundary e_start="117455" e_stop="118283" e_length="829"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117057" stop="117245"/>
              <exon start="117455" stop="117926"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274682" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117162" stop="117245"/>
              <exon start="117455" stop="117792"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237676" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117673" stop="118283"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744759" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGCCTGATATTACTGCTCCCGGTTTAAATATCCTGGCAGCATGGTCCCCAGCAATGTCTAGGTTGAAGTTCAACATACTCTCTGGAACCTCCATGGCTTGCCCTCACATATCAGGAGTTGTTGCCTTGTTAAAAGCCGTGCATCCATCATGGTCTCCCTCTGCAATCAAATCAGCCATCATGACAACAG : CCAAACTATCAGATATGCATCACAAACCCATAATAGTAGATCCTGAAGGGAAGAAGGCTAATCCATTTGATTTTGGTTCTGGATTTGTTAACCCCACGAAAGTCCTCAATCCTGGTCTGATATATGATGCACAACCAGAAGATTACAGAGCATTTCTTTGTTCAATTGGTTATGACGAGAAATCTCTGCATCTAATTACAAGGGACAACAGAACGTGTGATCAAACCTTTGCATCGCCAAATGAACTAAATTATCCCTCCATCACAGTACCAAACCTCAGAAACAATTACTCAGTATCTCGAACTGTCACAAATGTGGGAAAGTCAAGGAGTACTTACAAGGCAGTTATATTTGCACCAAAGGGTATCAATGTTACTGTGGTGCCGCGAAGATTAGCCTTCACTAGATATTACCAGAAGATGAATTTCACAGTGACTTTCAAAGTGGCTGCACCTACACAGGGATATGTCTTTGGGTCCTTGTCATGGAGGAACAAAAGAACATGGGTAACATCTCCACTTGTTGTCAGAGTGGCACATTCCAATATGGGTACTGTGGTATAGTTCAGCTGCAGTGCTATTTATTTGTGTTATATAAGGTAAGTAACAAGATATTGCAACCAGTAGCTGCTGAAAATGGTTGCATGAAGAAGCCAACACAAAATTCTTAGAAGAATACATGTAATTAGTAGCAGAATACAAATAATTAGTAATTCTTTATTCTATTTGTCCTTTAGTTTTGAGTTTTGGTTCTTGCTACCTAGTCAGGTTTTACTAATAGGGATACTGCAAATTCTTTTACTTGTCTAGTAATTGCATTATGTATTGGC</gDNA_template>
            <first_frame> S  L  I  L  L  L  P  V  *  I  S  W  Q  H  G  P  Q  Q  C  L  G  *  S  S  T  Y  S  L  E  P  P  W  L  A  L  T  Y  Q  E  L  L  P  C  *  K  P  C  I  H  H  G  L  P  L  Q  S  N  Q  P  S  *  Q  Q  :  P  N  Y  Q  I  C  I  T  N  P  *  *  *  I  L  K  G  R  R  L  I  H  L  I  L  V  L  D  L  L  T  P  R  K  S  S  I  L  V  *  Y  M  M  H  N  Q  K  I  T  E  H  F  F  V  Q  L  V  M  T  R  N  L  C  I  *  L  Q  G  T  T  E  R  V  I  K  P  L  H  R  Q  M  N  *  I  I  P  P  S  Q  Y  Q  T  S  E  T  I  T  Q  Y  L  E  L  S  Q  M  W  E  S  Q  G  V  L  T  R  Q  L  Y  L  H  Q  R  V  S  M  L  L  W  C  R  E  D  *  P  S  L  D  I  T  R  R  *  I  S  Q  *  L  S  K  W  L  H  L  H  R  D  M  S  L  G  P  C  H  G  G  T  K  E  H  G  *  H  L  H  L  L  S  E  W  H  I  P  I  W  V  L  W  Y  S  S  A  A  V  L  F  I  C  V  I  *  G  K  *  Q  D  I  A  T  S  S  C  *  K  W  L  H  E  E  A  N  T  K  F  L  E  E  Y  M  *  L  V  A  E  Y  K  *  L  V  I  L  Y  S  I  C  P  L  V  L  S  F  G  S  C  Y  L  V  R  F  Y  *  *  G  Y  C  K  F  F  Y  L  S  S  N  C  I  M  Y  W  </first_frame>
            <second_frame>  A  *  Y  Y  C  S  R  F  K  Y  P  G  S  M  V  P  S  N  V  *  V  E  V  Q  H  T  L  W  N  L  H  G  L  P  S  H  I  R  S  C  C  L  V  K  S  R  A  S  I  M  V  S  L  C  N  Q  I  S  H  H  D  N  S :   Q  T  I  R  Y  A  S  Q  T  H  N  S  R  S  *  R  E  E  G  *  S  I  *  F  W  F  W  I  C  *  P  H  E  S  P  Q  S  W  S  D  I  *  C  T  T  R  R  L  Q  S  I  S  L  F  N  W  L  *  R  E  I  S  A  S  N  Y  K  G  Q  Q  N  V  *  S  N  L  C  I  A  K  *  T  K  L  S  L  H  H  S  T  K  P  Q  K  Q  L  L  S  I  S  N  C  H  K  C  G  K  V  K  E  Y  L  Q  G  S  Y  I  C  T  K  G  Y  Q  C  Y  C  G  A  A  K  I  S  L  H  *  I  L  P  E  D  E  F  H  S  D  F  Q  S  G  C  T  Y  T  G  I  C  L  W  V  L  V  M  E  E  Q  K  N  M  G  N  I  S  T  C  C  Q  S  G  T  F  Q  Y  G  Y  C  G  I  V  Q  L  Q  C  Y  L  F  V  L  Y  K  V  S  N  K  I  L  Q  P  V  A  A  E  N  G  C  M  K  K  P  T  Q  N  S  *  K  N  T  C  N  *  *  Q  N  T  N  N  *  *  F  F  I  L  F  V  L  *  F  *  V  L  V  L  A  T  *  S  G  F  T  N  R  D  T  A  N  S  F  T  C  L  V  I  A  L  C  I  G </second_frame>
            <third_frame>   P  D  I  T  A  P  G  L  N  I  L  A  A  W  S  P  A  M  S  R  L  K  F  N  I  L  S  G  T  S  M  A  C  P  H  I  S  G  V  V  A  L  L  K  A  V  H  P  S  W  S  P  S  A  I  K  S  A  I  M  T  T   : A  K  L  S  D  M  H  H  K  P  I  I  V  D  P  E  G  K  K  A  N  P  F  D  F  G  S  G  F  V  N  P  T  K  V  L  N  P  G  L  I  Y  D  A  Q  P  E  D  Y  R  A  F  L  C  S  I  G  Y  D  E  K  S  L  H  L  I  T  R  D  N  R  T  C  D  Q  T  F  A  S  P  N  E  L  N  Y  P  S  I  T  V  P  N  L  R  N  N  Y  S  V  S  R  T  V  T  N  V  G  K  S  R  S  T  Y  K  A  V  I  F  A  P  K  G  I  N  V  T  V  V  P  R  R  L  A  F  T  R  Y  Y  Q  K  M  N  F  T  V  T  F  K  V  A  A  P  T  Q  G  Y  V  F  G  S  L  S  W  R  N  K  R  T  W  V  T  S  P  L  V  V  R  V  A  H  S  N  M  G  T  V  V  *  F  S  C  S  A  I  Y  L  C  Y  I  R  *  V  T  R  Y  C  N  Q  *  L  L  K  M  V  A  *  R  S  Q  H  K  I  L  R  R  I  H  V  I  S  S  R  I  Q  I  I  S  N  S  L  F  Y  L  S  F  S  F  E  F  W  F  L  L  P  S  Q  V  L  L  I  G  I  L  Q  I  L  L  L  V  *  *  L  H  Y  V  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="117059" stop="117245"/>
                    <exon start="117455" stop="118017"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>747</number_coding_nucleotides>
                  <number_encoded_amino_acids>249</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PDITAPGLNILAAWSPAMSRLKFNILSGTSMACPHISGVVALLKAVHPSWSPSAIKSAIMTTAKLSDMHHKPIIVDPEGKKANPFDFGSGFVNPTKVLNPGLIYDAQPEDYRAFLCSIGYDEKSLHLITRDNRTCDQTFASPNELNYPSITVPNLRNNYSVSRTVTNVGKSRSTYKAVIFAPKGINVTVVPRRLAFTRYYQKMNFTVTFKVAAPTQGYVFGSLSWRNKRTWVTSPLVVRVAHSNMGTVV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="-" PGL_start="118903" PGL_stop="118437"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="118903" e_stop="118437"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.981">
            <gDNA_exon_boundary e_start="118903" e_stop="118437" e_length="467"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="118903" stop="118437"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E541270" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="118903" stop="118437"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548522" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="118902" stop="118438"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295636" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGCATGCAATGCCAATTCAAAATGGGTTAAAACACACCAAGAGAGTCCCACCAAACGAAGTTTCCCCATTATTCCAATATGCTGAGAAATCAACACCTGAATTCTCGCCAGATACTTCCACTTCTGGAAAAGAATATCGGGCATTAAGGAGAAAGTATCTATTGCTGGAAGAAGAAAGTTTTGGTCTTAATAAAGAATTGAGAGAAACCGATGATGAGATCAAGGCCCTTGAAGACGAGAAGCTAACACTCCTTGATGATCTTGTTGTGTTAGAAGGCCTGGTTGATCCTTCAGATATTCAATCCCAAGGCCAGCGATTATGATGGTTTATTTATAATGTGTTTTTTCGGTAAACTGGGGATATATACAGAATTGTGTACAATAATCCAACTTCTGTTAGCATAAAGTTGAGATTGTAACGATGCATTATATAACATCGACTGATTGTTTATTGCACAATTACCAAA</gDNA_template>
            <first_frame> C  M  Q  C  Q  F  K  M  G  *  N  T  P  R  E  S  H  Q  T  K  F  P  H  Y  S  N  M  L  R  N  Q  H  L  N  S  R  Q  I  L  P  L  L  E  K  N  I  G  H  *  G  E  S  I  Y  C  W  K  K  K  V  L  V  L  I  K  N  *  E  K  P  M  M  R  S  R  P  L  K  T  R  S  *  H  S  L  M  I  L  L  C  *  K  A  W  L  I  L  Q  I  F  N  P  K  A  S  D  Y  D  G  L  F  I  M  C  F  F  G  K  L  G  I  Y  T  E  L  C  T  I  I  Q  L  L  L  A  *  S  *  D  C  N  D  A  L  Y  N  I  D  *  L  F  I  A  Q  L  P   </first_frame>
            <second_frame>  A  C  N  A  N  S  K  W  V  K  T  H  Q  E  S  P  T  K  R  S  F  P  I  I  P  I  C  *  E  I  N  T  *  I  L  A  R  Y  F  H  F  W  K  R  I  S  G  I  K  E  K  V  S  I  A  G  R  R  K  F  W  S  *  *  R  I  E  R  N  R  *  *  D  Q  G  P  *  R  R  E  A  N  T  P  *  *  S  C  C  V  R  R  P  G  *  S  F  R  Y  S  I  P  R  P  A  I  M  M  V  Y  L  *  C  V  F  S  V  N  W  G  Y  I  Q  N  C  V  Q  *  S  N  F  C  *  H  K  V  E  I  V  T  M  H  Y  I  T  S  T  D  C  L  L  H  N  Y  Q  </second_frame>
            <third_frame>   H  A  M  P  I  Q  N  G  L  K  H  T  K  R  V  P  P  N  E  V  S  P  L  F  Q  Y  A  E  K  S  T  P  E  F  S  P  D  T  S  T  S  G  K  E  Y  R  A  L  R  R  K  Y  L  L  L  E  E  E  S  F  G  L  N  K  E  L  R  E  T  D  D  E  I  K  A  L  E  D  E  K  L  T  L  L  D  D  L  V  V  L  E  G  L  V  D  P  S  D  I  Q  S  Q  G  Q  R  L  *  W  F  I  Y  N  V  F  F  R  *  T  G  D  I  Y  R  I  V  Y  N  N  P  T  S  V  S  I  K  L  R  L  *  R  C  I  I  *  H  R  L  I  V  Y  C  T  I  T  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="118901" stop="118581"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>318</number_coding_nucleotides>
                  <number_encoded_amino_acids>106</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HAMPIQNGLKHTKRVPPNEVSPLFQYAEKSTPEFSPDTSTSGKEYRALRRKYLLLEEESFGLNKELRETDDEIKALEDEKLTLLDDLVVLEGLVDPSDIQSQGQRL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 171 chains have been computed
$ 
$ memory statistics:
$ 225872 bytes spliced alignments in total
$ 106 spliced alignments have been stored
$ 2130 bytes was the average size of a spliced alignment
$ 30256 bytes predicted gene locations in total
$ 20 predicted gene locations have been stored
$ 1512 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 179 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-28 09:15:21
-->
