<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-28 09:18:35"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U574166" ref_strand="+" ref_description="SGN-U574166 Tomato 200607#2 [14 ESTs aligned] (*GB) gi|157341095|emb|CAO49002.1| (e_value=6e-141) unnamed; (*ATH) AT5G14170.1 (e_value=3e-136)  Symbol: None | SWIB complex BAF60b domain-containing protein, similar to brahma associated protein 60 kDa (Drosophila melanogaster) GI:3378134, SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin D1 (Homo sapiens) GI:4566530; ... ; (*SWP) sp|Q9FMT4|SNF12_ARATH (e_value=2e-135) SWI/SNF complex component SNF12 homolog OS=Arabidopsis thaliana GN=At5g14170; ">
      <seq>cagggttggtcgatttactttctctctaaagaagacgatcgaccgcttcccggcgattgttaacgatcctcttccctttttttaaggctgcgaattctctctctccggcgaaatcaagcttatgcgagattctttttgactgttgcatagctatgtcggttaacaataataataaccctaacaagaatatcggaggaccatcttcctttggcaattcaccgccggggaatccgatggcacatctccaggcacaatcacaaggccagcaacagatgccttcagggtttcctggggcatttcagctatcgcagctatctgctgcacatgcccaagcaattgctcaagctcagtcgaaagttcaggctcatgcgcaagctcaagcacaagctcaagctgctcatgcccagtttcaggcccagttacaggctcagggtttatctcttagccaggctcatgctcttggcaattttggttcttcctcaccctcgatgcctggaagtgctttggcaaaacgcttacctcagaaacctcctgtgcggccacctgcattcacaactactaacacaatttctccaatgagaacaatggagctttcagcggctgctcgtaggaaaaagcagaagcttcctgagaagcacatgaacgagaaggtggcagccattttgcctgaatcttccctttatactcagctccttgagtttgaatctcgggttgattccgctttaacaagaaagaaagttgacatccaggagtcattgaagaatccacctactattcagaagacgcttcgaatttatgtattcaatagttttgctaatcaggttcgtaccattcctaagaagccaacagctgaacctcctacatggactcttaagattgtaggaaggattttggaggagggaatggatcctgatcaagctgccatgtttcagaaaactagctccatgtacccaaagttctctactttcttcaaaagagtcaccatttccttggaccagaaactctatcctgataaccatattataatttgggactctgcgcgatctcctgcacctcaggatggttttgaggtcaaaagaaaaggagagcaagagttcactgctaatttaagactagaattgaattacatgcctgagaaatacaaactttcaccagctttaactgaagttctgggtattgaggttgagactcgtgctagaattgtctcttctatctggcattatgttaaggctcgaaagttgcagaaccctgatgatccttcttacttcaactgtgatcctccacttcagaaagtttttggggaaggaaaggttaagttcaatacagtcacaccaaagatcacacctcatttgtctcctccacaacccatacatttggaacacaggattaagctttctggaaatacccctgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="8" stop="2170"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="308" g_stop="428" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="429" i_stop="580" i_length="152">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="581" g_stop="1870" g_length="1290"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="1411" r_length="1290" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-U574166" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1411</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U574166" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="308" e_stop="428"/>
          <exon e_start="581" e_stop="1870"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGGTTGGTCGATTTACTTTCTCTCTAAAGAAGACGATCGACCGCTTCCCGGCGATTGTTAACGATCCTCTTCCCTTTTTTTAAGGCTGCGAATTCTCTCTCTCCGGCGAAATCAAGCTTGTAAGTTTCTCCCTGCTGTTCTTTTTTCTAGATTTGTTGCTTTCATTTTTTCGGTAGATTATAAAAAAAAGCCCTAATTTTTTTCAGTGATTTGTACTGGTGTTGTTGTGTTTTGAGTGAATTGGAGAAAAACTGTTTGTGTTTTGATGCAGATGCGAGATTCTTTTTGACTGTTGCATAGCTATGTCGGTTAACAATAATAATAACCCTAACAAGAATATCGGAGGACCATCTTCCTTTGGCAATTCACCGCCGGGGAATCCGATGGCACATCTCCAGGCACAATCACAAGGCCAGCAACAGATGCCTTCAGGGTTTCCTGGGGCATTTCAGCTATCGCAGCTATCTGCTGCACATGCCCAAGCAATTGCTCAAGCTCAGTCGAAAGTTCAGGCTCATGCGCAAGCTCAAGCACAAGCTCAAGCTGCTCATGCCCAGTTTCAGGCCCAGTTACAGGCTCAGGGTTTATCTCTTAGCCAGGCTCATGCTCTTGGCAATTTTGGTTCTTCCTCACCCTCGATGCCTGGAAGTGCTTTGGCAAAACGCTTACCTCAGAAACCTCCTGTGCGGCCACCTGCATTCACAACTACTAACACAATTTCTCCAATGAGAACAATGGAGCTTTCAGCGGCTGCTCGTAGGAAAAAGCAGAAGCTTCCTGAGAAGCACATGAACGAGAAGGTGGCAGCCATTTTGCCTGAATCTTCCCTTTATACTCAGCTCCTTGAGTTTGAATCTCGGGTTGATTCCGCTTTAACAAGAAAGAAAGTTGACATCCAGGAGTCATTGAAGAATCCACCTACTATTCAGAAGACGCTTCGAATTTATGTATTCAATAGTTTTGCTAATCAGGTTCGTACCATTCCTAAGAAGCCAACAGCTGAACCTCCTACATGGACTCTTAAGATTGTAGGAAGGATTTTGGAGGAGGGAATGGATCCTGATCAAGCTGCCATGTTTCAGAAAACTAGCTCCATGTACCCAAAGTTCTCTACTTTCTTCAAAAGAGTCACCATTTCCTTGGACCAGAAACTCTATCCTGATAACCATATTATAATTTGGGACTCTGCGCGATCTCCTGCACCTCAGGATGGTTTTGAGGTCAAAAGAAAAGGAGAGCAAGAGTTCACTGCTAATTTAAGACTAGAATTGAATTACATGCCTGAGAAATACAAACTTTCACCAGCTTTAACTGAAGTTCTGGGTATTGAGGTTGAGACTCGTGCTAGAATTGTCTCTTCTATCTGGCATTATGTTAAGGCTCGAAAGTTGCAGAACCCTGATGATCCTTCTTACTTCAACTGTGATCCTCCACTTCAGAAAGTTTTTGGGGAAGGAAAGGTTAAGTTCAATACAGTCACACAAAAGATCACACCTCATTTGTCTCCTCCACAACCCATACATTTGGAACACAGGATTAAGCTTTCTGGAAATAACCCTGT</genome_strand>
        <mrna_strand>CAGGGTTGGTCGATTTACTTTCTCTCTAAAGAAGACGATCGACCGCTTCCCGGCGATTGTTAACGATCCTCTTCCCTTTTTTTAAGGCTGCGAATTCTCTCTCTCCGGCGAAATCAAGCTT........................................................................................................................................................ATGCGAGATTCTTTTTGACTGTTGCATAGCTATGTCGGTTAACAATAATAATAACCCTAACAAGAATATCGGAGGACCATCTTCCTTTGGCAATTCACCGCCGGGGAATCCGATGGCACATCTCCAGGCACAATCACAAGGCCAGCAACAGATGCCTTCAGGGTTTCCTGGGGCATTTCAGCTATCGCAGCTATCTGCTGCACATGCCCAAGCAATTGCTCAAGCTCAGTCGAAAGTTCAGGCTCATGCGCAAGCTCAAGCACAAGCTCAAGCTGCTCATGCCCAGTTTCAGGCCCAGTTACAGGCTCAGGGTTTATCTCTTAGCCAGGCTCATGCTCTTGGCAATTTTGGTTCTTCCTCACCCTCGATGCCTGGAAGTGCTTTGGCAAAACGCTTACCTCAGAAACCTCCTGTGCGGCCACCTGCATTCACAACTACTAACACAATTTCTCCAATGAGAACAATGGAGCTTTCAGCGGCTGCTCGTAGGAAAAAGCAGAAGCTTCCTGAGAAGCACATGAACGAGAAGGTGGCAGCCATTTTGCCTGAATCTTCCCTTTATACTCAGCTCCTTGAGTTTGAATCTCGGGTTGATTCCGCTTTAACAAGAAAGAAAGTTGACATCCAGGAGTCATTGAAGAATCCACCTACTATTCAGAAGACGCTTCGAATTTATGTATTCAATAGTTTTGCTAATCAGGTTCGTACCATTCCTAAGAAGCCAACAGCTGAACCTCCTACATGGACTCTTAAGATTGTAGGAAGGATTTTGGAGGAGGGAATGGATCCTGATCAAGCTGCCATGTTTCAGAAAACTAGCTCCATGTACCCAAAGTTCTCTACTTTCTTCAAAAGAGTCACCATTTCCTTGGACCAGAAACTCTATCCTGATAACCATATTATAATTTGGGACTCTGCGCGATCTCCTGCACCTCAGGATGGTTTTGAGGTCAAAAGAAAAGGAGAGCAAGAGTTCACTGCTAATTTAAGACTAGAATTGAATTACATGCCTGAGAAATACAAACTTTCACCAGCTTTAACTGAAGTTCTGGGTATTGAGGTTGAGACTCGTGCTAGAATTGTCTCTTCTATCTGGCATTATGTTAAGGCTCGAAAGTTGCAGAACCCTGATGATCCTTCTTACTTCAACTGTGATCCTCCACTTCAGAAAGTTTTTGGGGAAGGAAAGGTTAAGTTCAATACAGTCACACCAAAGATCACACCTCATTTGTCTCCTCCACAACCCATACATTTGGAACACAGGATTAAGCTTTCTGGAAATACCCCTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U585399" ref_strand="+" ref_description="SGN-U585399 Tomato 200607#2 [12 ESTs aligned] (*GB) gi|157341103|emb|CAO49010.1| (e_value=3e-36) unnamed; (*ATH) AT3G27100.1 (e_value=9e-32) | Symbol: None | expressed protein | chr3:9995832-9997249 REVERSE | Aliases: MOJ10.18; (*SWP) sp|Q3ZBJ0|ENY2_BOVIN (e_value=2e-19) Enhancer of yellow 2 transcription factor homolog OS=Bos taurus GN=ENY2; ">
      <seq>agaagtttccagacgcagcttgattgggggtagggctggaagatataggcgcgaagcttcaatcagattatcgggttttcttagctcaacaaaaatatgaggcattcggtgaatcgtccaccaacacctgatacacgggatgaacaagaaaaggagcctacacttaaggaaattatcaacattaagttgattgaaagtggggaaaaggaaagattaatggagcttttgagggaaaggcttgttgagtctgggtggaaggatgaaatgaaagctctttgtagggagtatataaagaagaaaggacggaacaatataaccattgacgaccttgtacatgtgattaccccaaaaggcagagcttcaattcctgatccgatcaaagctgaattgcttcagagaattcgtacatttcttgtttctcccactctctgattcaacagcttcatgcatgaagagggtagcaatataggtgaagatgtggcattatgtttgactcatttcatcttggaacatcgtttgtctagattatgaccacgatgaggaaaccaggagccatatgagaagatgtgctattggcagtttgcttgtaccaagtttcgtagaactgtataaattgctacttggtggttttatgttgatggcccaggttcagagtttgatcactacatgaccctcaccttttagtggctaaactatctgttatctggttgtccctagttttaagaaagtgtagttttattgagatgcctgctcctcagcagaatccctgctcttcttttgtgtgtactttactcatgtgttcttcgtattagtgaaagccagttggttgtgtgttctctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="4314" stop="8675"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4614" g_stop="4711" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4712" i_stop="4812" i_length="101">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4813" g_stop="4900" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="186" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4901" i_stop="4977" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4978" g_stop="5072" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="281" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="5073" i_stop="7518" i_length="2446">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.848" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7519" g_stop="7595" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="358" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="7596" i_stop="7892" i_length="297">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="7893" g_stop="8375" g_length="483"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="841" r_length="483" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-U585399" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>841</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U585399" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4614" e_stop="4711"/>
          <exon e_start="4813" e_stop="4900"/>
          <exon e_start="4978" e_stop="5072"/>
          <exon e_start="7519" e_stop="7595"/>
          <exon e_start="7893" e_stop="8375"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGTTTCCAGACGCAGCTTGATTGGGGGTAGGGCTGGAAGATATAGGCGCGAAGCTTCAATCAGATTATCGGGTTTTCTTAGCTCAACAAAAATATGTAATTTCTCCTTCTCCAAACTTACGGTTTTGGTATTATTTATCTGTTAAAAATCATGATTTTTGTTTAATACTTATGGTTTTGTGAATTGTAATGAGTAGGAGGCATTCGGTGAATCGTCCACCAACACCTGATACACGGGATGAACAAGAAAAGGAGCCTACACTTAAGGAAATTATCAACATTAAGGTAAATTTTTAGTCCTTTTTAGATTAGTTGTGTGGGTCTTTTTTTAAAAAAAAATGTTTGATGATTTGCTTTTTTAGTTGATTGAAAGTGGGGAAAAGGAAAGATTAATGGAGCTTTTGAGGGAAAGGCTTGTTGAGTCTGGGTGGAAGGATGAAATGAAAGCTCTTTGTAGGTAATGTATCTCTCTGTGACCTTGTTTCAAACACTTGGAAGGATGAATTGTTGTTTAGTGTTCTCCAAATGAGTTAGCTATGTGTTTTGATCTGTTTTTCAGCAATTGGTGCCTTGGCCTTTGCTACAATGAACCCCAGATAGGAAGTTTATTACTTTTCTTGTTTTGTTGGCATGTGAAAACTTTAATGCTTATTTGACAATCTTGTTATGTTGATTTTTATGGCAAGTGAAAATGCAATTGTGTGTACTACATCCGTGCTTTGCATTCTAGAGGTGCATGTGGTTCAGTTCTCATCAGGACTTTTCATCCCTCTTCCCTCATCCCAGGCTTTCCACGCCCCTTAGACCCCAAATGGTGCTAGGCAAGAAAGGCAAGTTATTTAAGTTTTTCATACTACTTGAACAATAAAACCACCAACAAGTAAGGTGTTCTAAGTTCCTACCGCTGCTTTTACTCTAATAATTGATTGCTTTCGACACACTGATATTAGTGTCTTTTCTGTCTTAAACACACCAACCCTCCTCACAGCATCCCCCTCCTTCCCAAACCAGAAAAAAAAAAGAAGGAAAGAGAACCTTTTTTCTAATAACCATGGTCTGTTCTAGCTTGCATGTAGCTTAGCTATTTCCATGGGATACCTGCTACCTCTCACCAGCACAGGTGTTCTCCATGGCTAGACAGATGGGAAGAAATCACTTAGTGTTTTCATTCTTAAAAGAAAAAGATCACCTTGTGTTTTTGTCTCCGCTGGAAATTGGACCATGAGAAAATTGAACATGAAATCTCATGGTTCTCAACCCAGTCCATGCTCTTGGGTGCACAAGAACCTTTTCCCCTGCTTTTGACCCTAATTCTACTTAAATCAGTGTTGACACCCCAACTAGTTCTAATTCAACTAGTGAAAATTAAAAGGAAGAAACTCTATTATCCTAATTCTAAAATCCAATTATCGAACCTCTCTAATCAGATGGTTACCCTGAATTATTTTAGAAGTAATAAACTTTTGTTTTGTAGTTCCAAAACCCCGACAAAAGATGTCACAAGATGTTTTTTCATTCAACCAGGCATGCATATTAAAAGATAGTTAAATTGGAAATGTTTAATTTTTCAAAAAAAAATTAAATTGGAAAGACAAGTTCAAGAAGTGACAATCCTCCAGCTCTTTTTTTTGGACAAGAGGAGGTTGCTCGGATGGTAAGCACCCTCCACCCCCAACCCTGAGGCTGTGGATTCAAGTCACCTTAGGGAGCAAAACGGATGGGAGCTCCTAGGGAGGAGTTAAAAAGAAGAAGGGGTTTTGAAGGTAAGAGTTCTAGAGGGAAACTAGATGATGAGTAGAAAGAAGAGAGATGGACTCCCTTGAAAAATAAAACTAAAAGAACTTCCTCAGAAAAGGAAGGGATAGAGATGGTAGGGGTATGAGGGGCCTAAGCAAGGAAGGGAAGTGAGGATATGAAGCATGGCAAAAGAGGATGTATGGAGGAGGAGAAGAATGGATAAGGGAGTCTGAAGGGAATGACTAGAAGGTAGTTGAAGGTACAATTGAGGGTTGCAAGTCTGCTGAAAAAAAAGACTCACAGAATTAGTAAGGCAATTTGCCAAAGTAGGATGGGGAGGGTTGGAGGAATAGTTGTGGGATATGGTTGGGAAGGGGCGGAAATAGGAGAAGAAAACATACAAAATAAGGGTAGTGGAAATGCTTGACTTGTTTGATTAGTAGCAGAGATTTTATTCTATTTGAAGAAAGGGAAAAAGTATCACTTCTTCCCCAAATTAACTACTTTAAGCTGGCGTCGATGGTAAAGTTGTGTATTTTGACAATATGCTTTTGTTAAATTATGTGGTATTTTGTGGCCAAAAACCTAATTGTTTAGTGATACTCTATTTTTTCTTTTAAATTTGAAAATTATGTTAGCTATCAATTTTGATTTGGAGATTACAGCCAACTTGGGGGTACTTTGCTGTGGCTAAACTTGAGTTGTATATGAGGGAGAAGGTACATCAGTTCAGTAGTGAAAGGTTATTTAGTTAGATGATGTAAGAGAAAGGGGAGGGGGGTGGGTATTTAATAATACAGGGAAAGCAAAATGTCATAAGAACCAAGAACTCTCGTTCTAGCTATCCTTGTGTTGCAAGTTCTCTTTGTTTTTTTTATTGTCCTGTTTTTTATTTATGGTCCTAATTATTATAAGGTTTGGTGGAGCTATCTTGGAGAAAAAGTTTTGTTTATGTGGCGAGGGTGACAACTATTTGTCTCAATCTTTCAGTTCTTGATATGCACTTGTTTGTGTCTGAGGGTACTTAAAAATAAATTTTTCAAGTTATGACCATATTTGTTCATCTTCTATGATCGTTGTTTTCTGTTTGTTATTCTGTACATATAGCCACCAAATTTTCATTTTGACATGTAACCTTTGTCACATTTGTTCTCTATCAACACTAGGGAGTATATAAAGAAGAAAGGACGGAACAATATAACCATTGACGACCTTGTACATGTGATTACCCCAAAAGGCAGAGGTAAGGGCTTTGTATTTACTTTTGCTTTCTTTCAATACACACATACACACACCTGAAAAAGGAATGGCTATATATATGCTTAAAAGCTATTCCTTCTGCTTAATCTTCTAACTTTTCTTAAGCAACAAAAGAGCATTGATGTTGACATATTCCCTTGAGTAAACGTCATTCCAAATTCTTATTCATTTTCTGATTTTTGGATGTATTAGATGTTGCTCTTGCATTGCCTACATTTGATTATATGTAATTGTTGTTATCCTTGCTAAACTTCTCTGCTTCTTATTTGGAATGTTGCAGCTTCAATTCCTGATCCGATCAAAGCTGAATTGCTTCAGAGAATTCGTACATTTCTTGTTTCTCCCACTCTCTGATTCAACAGCTTCATGCATGAAGAGGGTAGCAATATAGGTGAAGATGTGGCATTATGTTTGACTCATTTCATCTTGGAACATCGTTTGTCTAGATTATGACCACGATGAGGAAACCAGGAGCCATATGAGAAGATGTGCTATTGGCAGTTTGCTTGTACCAAGTTTCGTAGAACTGTATAAATTGCTACTTGGTGGTTTTATGTTGATGGCCCAGGTTCAGAGTTTGATCACTACATGACCCTCACCTTTTAGTGGCTAAACTATCTGTTATCTGGTTGTCCCTAGTTTTAAGAAAGTGTAGTTTTATTGAGATGCCTGCTCCTCAGCAGAATCCCTGCTCTTCTTTTGTGTGTACTTTACTCATGTGTTCTTCGTATTAGTGAAAGCCAGTTGGTTGTGTGTTCTCTCT</genome_strand>
        <mrna_strand>AGAAGTTTCCAGACGCAGCTTGATTGGGGGTAGGGCTGGAAGATATAGGCGCGAAGCTTCAATCAGATTATCGGGTTTTCTTAGCTCAACAAAAATAT.....................................................................................................GAGGCATTCGGTGAATCGTCCACCAACACCTGATACACGGGATGAACAAGAAAAGGAGCCTACACTTAAGGAAATTATCAACATTAAG.............................................................................TTGATTGAAAGTGGGGAAAAGGAAAGATTAATGGAGCTTTTGAGGGAAAGGCTTGTTGAGTCTGGGTGGAAGGATGAAATGAAAGCTCTTTGTAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTATATAAAGAAGAAAGGACGGAACAATATAACCATTGACGACCTTGTACATGTGATTACCCCAAAAGGCAGAG.........................................................................................................................................................................................................................................................................................................CTTCAATTCCTGATCCGATCAAAGCTGAATTGCTTCAGAGAATTCGTACATTTCTTGTTTCTCCCACTCTCTGATTCAACAGCTTCATGCATGAAGAGGGTAGCAATATAGGTGAAGATGTGGCATTATGTTTGACTCATTTCATCTTGGAACATCGTTTGTCTAGATTATGACCACGATGAGGAAACCAGGAGCCATATGAGAAGATGTGCTATTGGCAGTTTGCTTGTACCAAGTTTCGTAGAACTGTATAAATTGCTACTTGGTGGTTTTATGTTGATGGCCCAGGTTCAGAGTTTGATCACTACATGACCCTCACCTTTTAGTGGCTAAACTATCTGTTATCTGGTTGTCCCTAGTTTTAAGAAAGTGTAGTTTTATTGAGATGCCTGCTCCTCAGCAGAATCCCTGCTCTTCTTTTGTGTGTACTTTACTCATGTGTTCTTCGTATTAGTGAAAGCCAGTTGGTTGTGTGTTCTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U573750" ref_strand="+" ref_description="SGN-U573750 Tomato 200607#2 [27 ESTs aligned] (*GB) gi|13631844|sp|P92792|TOM20_SOLTU (e_value=3e-97) Mitochondrial; (*ATH) AT3G27080.1 (e_value=3e-58)  Symbol: None | mitochondrial import receptor subunit TOM20-3 / translocase of outer membrane 20 kDa subunit 3 (TOM20-3), identical to mitochondrial import receptor subunit TOM20-3 SP:P82874 from (Arabidopsis thaliana) | chr3:9986319-9987866 REVERSE ... ; (*SWP) sp|P92792|TOM20_SOLTU (e_value=2e-98) Mitochondrial import receptor subunit TOM20 OS=Solanum tuberosum GN=TOM20; ">
      <seq>gaattgaccgactgataaaaactaagcaagggcaaaaggatttagctagaaccctaaactgatcgaatcgaagcaactcaacaatggagatgcaaagcgaattcgatcgtctccttttcttcgaacacgctcggaagagtgctgaaaccgcctatgctcagaatcccctagatgctgataacttgacgaggtggggaggtgcattgctggaattatcacagtttcagcccgtagctgaatcgaaacaaatgatttctgatgcaacatcaaagttggaggaggcattgacagtgaaccctgaaaagcatgatgcgctttggtgtttgggaaatgctcatacatcacatgcttttttaactcctgatatggatgaggctaaggtttactttgaaaaagcaactcagtgctttcaacaggcatttgatgcggatccctcaaatgacctttaccgcaaatctctggaagttactgctaaggctccagaattgcacatggaaatccacagacatggtcccatgcaacaacctatggcagcagaaccttcaacatcgacaagcacaaagagttcaaaaaagaagaagagcagtgatctcaagtatgacatttttgggtgggtcatacttgccgttggcattgttgcatgggtgggatttgcaaaatctaatatgcctccaccaccaccaccgcatccacagtgaaacccataatacagcttagctttactggtgaagatactctattagagtttttccttttgcataaacaggaccctaggcattaatgcctgtcatttagctagttactgaaactttataactttctggtgaaaactttgaagactttttttctgttgtaatagattaaataagactttttttctgttgtgatagatcaaataagactttttcttttaatctcgggatatttttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="17650" stop="24371"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17949" g_stop="18127" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18128" i_stop="18281" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18282" g_stop="18360" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="258" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18361" i_stop="18575" i_length="215">
            <donor d_prob="0.785" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18576" g_stop="18745" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="428" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18746" i_stop="18829" i_length="84">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18830" g_stop="18877" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="476" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18878" i_stop="23272" i_length="4395">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="23273" g_stop="23359" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="563" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="23360" i_stop="23703" i_length="344">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="23704" g_stop="24071" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="564" r_stop="931" r_length="368" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-U573750" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>931</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U573750" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17949" e_stop="18127"/>
          <exon e_start="18282" e_stop="18360"/>
          <exon e_start="18576" e_stop="18745"/>
          <exon e_start="18830" e_stop="18877"/>
          <exon e_start="23273" e_stop="23359"/>
          <exon e_start="23704" e_stop="24071"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATAGACCGACTGATAAAAACTAAGCAAGGGCAAAAGGATTTAGCTAGAACCCTAAACTGATCGAATCGAAGCAACTCAACAATGGAGATGCAAAGCGAATTCGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGATGTCCGTATCTCCTCTTTCTCTTCATTTATCATTTCTGTTTTATCGTTCTAATTTTCGATTTCAGCTGTTTGATGTGTTTTTGTGTTTAATTTGAACTTCGATGCATTGTTGAATGAATGAGTTTGTTGTTTCTGATATATGATGATGAATGCAGAACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTGGTATTGAGTTGCTTGAATTTTTGGTACTTGATTAAATAGTTTGTTATAAATTAGATTTTTCTAGTATCTGTTAGTTAAACCTATAATGTGTTTCTTCAGCCCAAAAAATGTTCTTCTTTTGTTTGCTGTTTTGGTTTGTTTCTGAAATTCTAAGAGACTGATGAAGTGTGTATTTGTTGTCGTTTACTATATGTTTTGGGGACTTAACTTGGCAGATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCGGTATATTTTTATCAATAGACATTCCAAATGTATTTGCTCCTGAACTGTTGGAAGTAGCTTAGATTTTTGTTACTCTGAATGCAGGATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAGGTGAAACTTTTGTTGTTCTTTAGCTAAGTGTCGATATGTTTAATGCTTTGCATCTTTATGTTGTATTTAGGTATTCCAAATGAATGATATCAAACTGATACACGTGGTTGTGTGCCATTGCCTTTTTCTCGCTTATTCCCCTTTTTTGCACTCAATTCTTTTTTTTTTCATGTTCATTCCTACATGGTCCTTTGTAATTGGTGTATATCGATATTGTGTTAATTTTTTGTGTATCTTTTCTTGCCCCTGACTTCCTCCTATCCATATTATGGTATTTTTAGCTTTTACATTTAGTCCAAAATAGATAGTTTTTAACATAAGCAAGAAGTTATTAATAGTTCTTTTCCAAATTTTCACTTAGATAAGTGAATTTTTACCTAACCAAGAAATCATGTTAAAGTAAAATTATTTTATCAAGGTGCAATCACTTATCTCAACGAGTAAGTGATTTCTTAAAAGGGTATGTCCAGGCTTAAAATACCATAGATATGGAATGAAGGGGGTATTGCACGTAGGCCTTACCCCTATCTTCGGAAGTACAAAGGTGGTTTTTGATAAGATCCTTGACTCATGGAAAAGCAATTTAAAGTAGATTGAAAAGAAATTACGAAGTGGACAAGCCATGGAAAAATTCTATAGAGAGCATGAGAAAACACTCTGAAAAGGTGTCGTAACTACAACAAAATACTATTATAATTGAAGTACAAGAAACATGTTGTAGCAGAAATAGGAAGACAAGAAACTACAAGAGTAATACTACAACGAACTAGTATGTAAGGAAAAGCAAGATGACACCCAACTATTTATCAACTTTTTTCCCAAATTCGTGTCCTTCATAACCTCCTATCTAAGGCTGTTTTCTCGATAAGTTTAACCTCATCATGCCCTATCTAATCACCTCTACCTTATGCTTCTTCGGACTATTTGTTCCTATCTGAATTTATCCATAGTCAACCTCTCACACCTCCTCGCTGGGGCATATGTTCCTTTCCTCTACACATTTACAGACCATCTCAGTTTTTTTCTTGCATCTTATCCTTCACCGGGGCTACTTCCACCTCACCCAAATATCTTTACTTCTAATACTATCTCTGTGAGTATGCCCACACATCTATCTCAACATACTCATTCCCGCAACTTCCATTTTATGATTGTGGGGGTTCTTAGCTAGCTAACATTCTGGCAATACAACATAGTTGGTCTAAACACCACTATGTATAACTTGCCTTAAGTTTCAATGGCACTTTCTTAGCACACAACACTTCGGAGGCAAGCCTCCACATCCACCCTGCACCTAAACGATGTGTGATGTTGTCATCAGGAACCTTCTTAGATTACACTTTACATCATTTGTCATTATACAGATGTAAAATTTAGTCAACATTAGAGCCAAATTTTTCGTTGTCAATCAGAGCATTATGAGATCTTACAAATTACTATGCCTCGGTCCAATTTATGTGATACCCTCCATTTTTGAGAGTCAATTTGTCGAAACTTGATGCTAGATTGAATTAGATTAGATGTTTAAAACTCTACAAAATTTACTATAAATTGCAAGTTTAACTGAGATTAATATTTTTAAGCATAACTATATATGAAGAACATAAATTGATTCTGGAGGTTCATTTAATGCATTTAATTTTTTTTCCTCAACTTCTTCTAAAACTGAACTTATCACCACGTTTAACTCGCATAAAGTCTTGCACCATGAAATATCACGCATGAAATTAAAACCTAATAAATACACCAAAAAACTATTATTGTCTATAACTACTGAAATTATATGCTCACAAATTCATATAAATGCCAATATTTTCCAGTTTATGGTTTTAACTGAGTTGTAATTATTTGACATAATTCAATTCATTTTAATTTATAGAATGTTGAATGGCTTTTTTCACTCTGTGTTAGATAACATGCTACTTGTCCAATCCAATAACTTTTGTCAGTTTGTCTGTTCGGGTAAGGTGATTAGAAGTCAAAGTTGTTAGTTTGAATATAGTCCATCTTGATTGACATGATGTATGCCCAAAACTGATTGCTTTAGAACGTCTGTTCAGTTTTGGTAGTTTAAACGTTGAGCTATAGTTAGCCATTTTGTAGGTCTCTATGTGCGGTTTACGTAGGTGAAACAGTCATTTCATATCTTTTGTATTATCTTAGAGACTGATAAATAAGAAAACGTCTTGCGGTAAAGGATGAATGGATTATCACATAAAGTTTATTGCTTTACTGTTAAGCCAAAAGACACTTATTGTTGGATGGTCATTCATCGTTGATATTGAGGGAGATGAAGAAGTGCAATTACTTTAAATATGAAAAATAGGAACTTCTATCAAAATGTGCGTTATTCCTCGTTACATGTGTTCATGCAGTGATACATATTATATATGTGACGCTAGTATGTGTATCAATTTGCTCATCATACTAATTTTGTTCCTGAAGGTTTTCTTGACGTCCTCTTTGGTTTCCATTCCTTACATCAGTAGGAGATGTAATGAATTCACACAAGTAGCAACAGATAAGGAAAATTATATTAGGACTCATTATAAGGAAGGAAATTAAGAAAGAACTGGGATAAAATCTGAAGCAACGATGCACCAATCACTACTCTACCAAGTGACTGCATCCTTCAGAACTTACCTATCTTGCAGGAAAAAGGGAAGTTGCAAATTTTGCAAATTCTTTTTCTACATCAATATTTATTTTAGGATAAATTACAGCCCAAACCTTTGGGCCATCTAGTTAATAAAATATGTACAGTTTATAGGTAGTGTCTACTTCGGTTTAGGTTTGGTAAACTAGATGGCCGAAGTTTACATCTTCTCAAGTATCCCTTTATTCTATCCTATTGCCATTCACATAATTATGGGGTGTGAGATTCTAGGTCCCGTTGGAGTTTATTAGGTAGCTGTCTGGTGTTTGGCTGGCTGGGTATTTCCTTGGTTTCGTTGGTGTAGAAGTGGATCGCACATGGGGGTTGCCCAAGACCCATCAATCCTCCCACACTCAATGTGAGACTCAACAGAACCTCCGCACGCCTGGGATTGGTCTTTTAGAATGTGGACAATGTAACTTGGGGGGGGGGGGGCAACATCGGATAAACAAAGAATTGGGATGAACCTTTCTCAGATACCATGATAAAAAAATTTCAACTGCAATATATTGATCAAGAGGTGAGGATTTTCAAAACCATATAAAGAGACCTAATCAACCCTCACACGATGTGGGACTCGACGGTAACATTTGGCAGTTGCTATATCAGAGATTTACTAAGGTTGCAACGCAAAAGTTTTTCCCTATCCTAGGAATATTTTCATGTTAAATACATTACGTGATTTATTTCCATATTTTCTGCATTCAATTCTAGCTTCTGCACCTTCTAATCAAATTGAACAACTAATGGGATATACTCACTATTTTACTAAAAATGGATCAAAGTGAATTTGTTTTGTTCTTCTGCTAAAAGTTTTCTTTATACGGATAAGATTCAACATTTACTGTATGAGAGATTTGTAAGGTTTCAGACTTAAAAGCTTTTCCTACTCTCCAGGCATCTTAGTATGTTTATTATTGTAAGCTATATGGAAGGGGCATTATGCATTTAAGTGGAAAGTCGTCTCCTTGAGTGATGACACTGAAAACGCTGCTATGATGTAGATGTCAGATCTTTTGACTTTTGTTTGTGGTCTCTGTCGATGAATCCTCCCTCCTTTTCTCTCCCCTACTGGTATATTCCCCAAACCCTTGAAAGGCTTCATTGGAAAACATAAGCTAAAGGCTGGTTGAGGATGTTCCCAATGGCAAGGCAATCCTCTGAAAGTGGGGGATTTGGTTTGCATATAAGACTATGTGAGCATAGAAATTGGTTTATTATAAGGTCAATGGATGTTAGTGTAATATAGTTCAATGTAGCTTCTATTGTCATATTTGTTGACATAGTAATGAGATGTACTATACTTTTTCTTAACTCTCTGATTGCTTAGCTTTTATTAAGCAAATGTGTGCAGGCATGTGATGGTAGTTGCTTGCACGAAAGATGCTTCCTTTTTTGTTGTTTGCATATATCTATCCTAAACCTCAGATTTTTTTTTCTCCAAAGAATGGTGGGAAATCTTTGTATGACACCCCCCTCCCCCCTCCCGACGACTATTTGGTTCCAACATTTCCTTGATTGAGTTGCATTTGTCTTTGGTAATGAATGTGGTTGAGTGTCAAATTATGCTGATATGTCAAAGCAAACAAGCTTGAGAAATGTCCTGACTAGGTGGTGCAGCTTGTGGAATATGATTGTTTAGTTTGTTTTATTTTATCAATTTTGTGATATCTTTACTCATGAAATGTCTCATTTTATGGTTGGGAGTCTCGATTTATGTTGTTCTACATTATATTTAGGCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAGGTATCTCTTTAGTCTTTAGTTCTCACGCTTTATCTCTTGATAGGAGCGATATCTTATCTTCTGTGTTCAGTATAATTCTTACTAATTGATGTGTCTTTATTATTTTTTTTTCTATTTAAATTGTTGTTCAGAAAAGTCGTGATGCCTTCCTCACAAAGTCTAATTGTTGCTCTTTGATTTTGTACGCCTTTAAATGTTACAATTACTTTATCCTCCCTCCTCCCTGGAAAATTGAAAGTTAAAGTCCTCTTAAGACTGGTACTGAATCTCTGTGAAAATCTGATTCATTTTTAATCTATCAATATTGTTGCTGATTCACCATTATGTCTGCTGTTGCATTGCAGAGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGTTGCATGGGTGGGATTTGCAAAATCTAATATGCCTCCACCACCACCACCGCATCCACAGTGAAACCCATAATACAGCTTAGCTTTACTGGTGAAGATACTCTATTAGAGTTTTTCCTTTTGCATAAACAGGACCCTAGGCATTAATGCCTGTCATTTAGCTAGTTACTGAAACTTTATAACTTTCTGGTGAAAACTTTGAAGACTTTTTTTCTGTTGTAATAGATTAAATAAGACTTTTTTTCTGTTGTGATAGATCAAATAAGACTTTTTCTTTTAATCTCGGGATATTTTTCA</genome_strand>
        <mrna_strand>GAATTGACCGACTGATAAAAACTAAGCAAGGGCAAAAGGATTTAGCTAGAACCCTAAACTGATCGAATCGAAGCAACTCAACAATGGAGATGCAAAGCGAATTCGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGAT..........................................................................................................................................................AACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTG.......................................................................................................................................................................................................................ATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCG....................................................................................GATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAG........................................................................................................................................................................................................................................................................................................................................................AGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGTTGCATGGGTGGGATTTGCAAAATCTAATATGCCTCCACCACCACCACCGCATCCACAGTGAAACCCATAATACAGCTTAGCTTTACTGGTGAAGATACTCTATTAGAGTTTTTCCTTTTGCATAAACAGGACCCTAGGCATTAATGCCTGTCATTTAGCTAGTTACTGAAACTTTATAACTTTCTGGTGAAAACTTTGAAGACTTTTTTTCTGTTGTAATAGATTAAATAAGACTTTTTTTCTGTTGTGATAGATCAAATAAGACTTTTTCTTTTAATCTCGGGATATTTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U576281" ref_strand="+" ref_description="SGN-U576281 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157341120|emb|CAO49027.1| (e_value=8e-112) unnamed; (*ATH) AT5G14120.1 (e_value=5e-100) | Symbol: None | nodulin family protein, similar to nodulin-like protein (Arabidopsis thaliana) GI:3329368, nodule-specific protein Nlj70 (Lotus japonicus) GI:3329366 | chr5:4555984-4559116 FORWARD | Aliases: MUA22.12, MUA22_12; ">
      <seq>acgaattaagaaaggaggctttagcttatacctagctgtgctcatctgatctcttctcatcaaaaaaagagagtaatcaaacgcaacgtatccccacacagcccaacttcattcattgataaaacaagaattttgaagttgaagatataaaaaatctgaagctctcgatctgaatccataacaatttatttgaaacaaagatttggctatttttttcataacagatggctggtgttcgttgctgcaatgtggattcaaacttgtgcgggacttggatacttattcggcagtatttctccagtaattaaaatctctctgaattacaatcagaaacagattgctcgattgggcgtggctaaagatttgggtgatagtgttggatttttagctgctactttgtgtgaaattttgcctttatgggctgcacttcttgtgggtgctattcagaattttattggatatggttggctttggcttattgtgactcgaagaactgaacctttgccattatgggctatgtgtattcttatatttataggaacaaatggtgaaacctacttcaacacagcagctttagtctcttgtgtacaaaatttcccgaaaagtcgcggtcctgtggttgggattcttaagggatttgctggcttaggtggtgctatcataactcagatatatgcagtaattcattccccggatcacgcttcacttatatttgtgattgcggttggaccagcaatggtgattatagctctcatgtttataatcaggcctgttggaggccatagacaagtcaggccttctgatggtttaagtttttcgtttgtttacagtatatgcctcattttagcttctttacttatggggagttatgattgttgaagacttagtcgatgttaagccaaaatgctattattatcctcacatctattctatttgtcatcttgattatccctattgtgatccctatctatttgagtttcactcaagagccaagagtagtaccagaagaagaggcacttgtatctcggtcaggtgatcaaggtcctggcagatcagaacactacgatggtcaagaaattatattttagtgaggttgaagaagagaaaccaaagggagtagacttgcttcctgctttagaaaggcagaaaaggatcgcgcagttacaagtgagactagcacaagcagctgcagaaggagctgtgagggtgaaaaggagacgaggtcctcgtaggggagaggactttactttagtccaggctttaataaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="28203" stop="25007"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27903" g_stop="27388" g_length="516"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="516" r_length="516" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27387" i_stop="26057" i_length="1331">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.662" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26056" g_stop="25307" g_length="750"/>
          <reference_exon_boundary r_type="cDNA" r_start="517" r_stop="1269" r_length="753" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-U576281" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>1266</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U576281" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27903" e_stop="27388"/>
          <exon e_start="26056" e_stop="25307"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAATTAAGAAAGGAGGCTTTAGCTTATACCTAGCTGTGCTCATCTGATCTCTTCTCATCAAAAAAAGAGAGTAATCAAACGCAACGTATCCCCACACAGCCCAACTTCATTCATTGATAAAACAAGAATTTTGAAGTTGAAGATATAAAAAATCTGAAGCTCTCGATCTGAATCCATGACAATTTATTTGAAACAAAGATTTGGCTATTTTTTTCATAACAGATGGCTGGTGTTCGTTGCTGCAATGTGGATTCAAACTTGTGCGGGACTTGGATACTTATTCGGCAGTATTTCTCCAGTAATTAAAATCTCTCTGAATTACAATCAGAAACAGATTGCTCGATTGGGCGTGGCTAAAGATTTGGGTGATAGTGTTGGATTTTTAGCTGCTACTTTGTGTGAAATTTTGCCTTTATGGGCTGCACTTCTTGTGGGTGCTATTCAGAATTTTATTGGATATGGTTGGCTTTGGCTTATTGTGACTCGAAGAACTGAACCTTTGCCATTATGGGCTGTGAGTAAACCACCCTTCTTCATTCATCTTCATTTCAAAAGTTTCTAATCGAAAAATATTTTTCAGAAAATGTTTTATTTAATTTTTTTTTCTTCATAACTTGAAATATAGAAAATGATCTTTCTTTTAGTTGAAGCTTAAAATAAGTTATACAAGTGATTCAATCGACTGTGTTCTTGTCAACTTATAATACATCTCATCTTCATTTTTTTTTCTTTACTTATACTATCAAACACAAAAAATAAATAAGAAACGTATATATTATTAATTCTTTTCTTTTTTTTGCTTATGAATTGAATATAAAAATTTCTAAAAATATTTTTCTTTCGTAGTGAACGCAACTCTATCTTTATGAGTTTTCTTTGAAACGAGGCTCTTGCTGTCCACTCATTTTTGCTATAGTTGGACGTTGAAAAGTTCCCATTTTTTTATATGATATGCATTAAATTAATTGAATTGTCACCAAAAAAATTTTATTTTTACTTTGTCAAACACAAAAACTAATTTTTAAAAAGTTTTTTTGTGGCATTCTTGCCATCTCAAAATGCGTCGAGCTCAAGTGGCTACAAAGTCGAATTTCATGTTTCTGTCTGGGGCATATCCAAAGTTTTAGCTACAAAGTGTATTGAAAAATTCACTAATATTTTATAAATATTTAAGTGGGAACTCAACTTAATTTGAAATTATTATAAGAATTCATAAATTTCAAATTTTGAATTTACTTTTATTCTGCTTTTCTTTTTTTCTAGTCTTGACATTTCTATTTTAAAGAAGAATTTGTAAAAACTAAGTTGGAATACTATATATATATATATACCCCGTAAATCGTAATAGTAAATGTTAGACAAGCATTTGTGCCTTAAAAATAAAGGTAACAAGTGTACTTTCCTATTATCGAATGGAGACACAAGTGCTTCTGTCCAAGTTGATACCTTACATGTTACCAAAGGGCTATTTAAATTGCATCTGTGTCTCCGAATTTTAGGAAAATATGTATGTGTATATATATACATAATACATAAATATCTGGTAGATTATGATTGAAATTTCAGAGACACACTTTAACTAAATTAATGTTTTATTATCCAAAACTTTTTTTTTTTTTTGTAATTTTATACATTTTCCATGCGGCTCAACTGTGCTTGATTGGAATTGAGGCATAGTACCAAAGTTTACACTTGAACTCAGTCCCTATTTTGCTGATTATCATAATGAATTATGTCTTATCCATGACATCAATTGGGCATAACTTATTAGTGTCTACTAGAGTGCAAAATTGTCACAAATTCCTTGTTTTCTCTAACAGCTGAAGTTTAACCATTTCTCTGCAGATGTGTATTCTTATATTTATAGGAACAAATGGTGAAACCTACTTCAACACAGCAGCTTTAGTCTCTTGTGTACAAAATTTCCCGAAAAGTCGCGGTCCTGTGGTTGGGATTCTTAAGGGATTTGCTGGCTTAGGTGGTGCTATCATAACTCAGATATATGCAGTAATTCATTCCCCGGATCACGCTTCACTTATATTTGTGATTGCGGTTGGACCAGCAATGGTGATTATAGCTCTCATGTTTATAATCAGGCCTGTTGGAGGCCATAGACAAGTCAGGCCTTCTGATGGTTTAAGTTTTTCGTTTGTTTACAGTATATGCCTCATTTTAGCTTC-TTACTTATTGGGAGTTATGATTGTTGAAGACTTAGTCGATGTT-AGCCAAAATGCTATTATTATCCTCACATCTATTCTATTTGTCATCTTGATTATCCCTATTGTGATCCCTATCTATTTGAGTTTCACTCAAGAGCCAAGAGTAGTACCAGAAGAAGAGGCACTTGTATCTCGGTCAGGTGATCAAGGTCCTGGCAGATCAGAACACTACGATGGTCAAGAAATTATA-TTTAGTGAGGTTGAAGAAGAGAAACCAAAGGGAGTAGACTTGCTTCCTGCTTTAGAAAGGCAGAAAAGGATCGCGCAGTTACAAGTGAGACTAGCACAAGCAGCTGCAGAAGGAGCTGTGAGGGTGAAAAGGAGACGAGGTCCTCGTAGGGGAGAGGACTTTACTTTAGTCCAGGCTTTAATAAAA</genome_strand>
        <mrna_strand>ACGAATTAAGAAAGGAGGCTTTAGCTTATACCTAGCTGTGCTCATCTGATCTCTTCTCATCAAAAAAAGAGAGTAATCAAACGCAACGTATCCCCACACAGCCCAACTTCATTCATTGATAAAACAAGAATTTTGAAGTTGAAGATATAAAAAATCTGAAGCTCTCGATCTGAATCCATAACAATTTATTTGAAACAAAGATTTGGCTATTTTTTTCATAACAGATGGCTGGTGTTCGTTGCTGCAATGTGGATTCAAACTTGTGCGGGACTTGGATACTTATTCGGCAGTATTTCTCCAGTAATTAAAATCTCTCTGAATTACAATCAGAAACAGATTGCTCGATTGGGCGTGGCTAAAGATTTGGGTGATAGTGTTGGATTTTTAGCTGCTACTTTGTGTGAAATTTTGCCTTTATGGGCTGCACTTCTTGTGGGTGCTATTCAGAATTTTATTGGATATGGTTGGCTTTGGCTTATTGTGACTCGAAGAACTGAACCTTTGCCATTATGGGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGTATTCTTATATTTATAGGAACAAATGGTGAAACCTACTTCAACACAGCAGCTTTAGTCTCTTGTGTACAAAATTTCCCGAAAAGTCGCGGTCCTGTGGTTGGGATTCTTAAGGGATTTGCTGGCTTAGGTGGTGCTATCATAACTCAGATATATGCAGTAATTCATTCCCCGGATCACGCTTCACTTATATTTGTGATTGCGGTTGGACCAGCAATGGTGATTATAGCTCTCATGTTTATAATCAGGCCTGTTGGAGGCCATAGACAAGTCAGGCCTTCTGATGGTTTAAGTTTTTCGTTTGTTTACAGTATATGCCTCATTTTAGCTTCTTTACTTATGGGGAGTTATGATTGTTGAAGACTTAGTCGATGTTAAGCCAAAATGCTATTATTATCCTCACATCTATTCTATTTGTCATCTTGATTATCCCTATTGTGATCCCTATCTATTTGAGTTTCACTCAAGAGCCAAGAGTAGTACCAGAAGAAGAGGCACTTGTATCTCGGTCAGGTGATCAAGGTCCTGGCAGATCAGAACACTACGATGGTCAAGAAATTATATTTTAGTGAGGTTGAAGAAGAGAAACCAAAGGGAGTAGACTTGCTTCCTGCTTTAGAAAGGCAGAAAAGGATCGCGCAGTTACAAGTGAGACTAGCACAAGCAGCTGCAGAAGGAGCTGTGAGGGTGAAAAGGAGACGAGGTCCTCGTAGGGGAGAGGACTTTACTTTAGTCCAGGCTTTAATAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U567069" ref_strand="+" ref_description="SGN-U567069 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|15144515|gb|AAK84482.1| (e_value=2e-130) unknown [Lycopersicon esculentum]; (*ATH) AT5G33303.1 (e_value=4e-77) | Symbol: None | expressed protein | chr5:12587406-12588456 FORWARD | Aliases: None; ">
      <seq>gaattttagtaagttcttttataacacgttatcagcacgaaattgctacttgcaaaggtactatataaatatttttatttaattcacatattctctcataattttcattatgtcgaatttatccaaacttgagtttgtggcattagatatttctggaaagaattatctttcatgggtactcgatgctgagattcacttggctgctaaaggtcttgatgccactattactcagggaaatgaagcatcgagtcaagataaggcgaaggctatgattttccttcgtcatcatcttgatgagggcctgaagattgaatatctgacagtgaaagatccacttgaattgtggactgatttaaaggggagatatgaccacctaaaggcaacagtgttgccaagagctcgttatgagtggatgcatttacggtttcaagattttaagaccgtaattgaatacaactctgctgtattcaggataacctcccagttgaaattatgtggggagactataaaagatgaggacatgttggaaaagacacttactacttttcatgcctcgaatgtgatattgcagcagcaatatcgtgaaaagggttttcagaaatattctgaactaatctcatgtcttttggtggctgagcaacataatgctcttttaatgaaaaatcatgaagctcgtcccactggagctgctccattaccggaggcaaatgcggtggaagcacgtgatcaatctgaagtaaaaagaaatgatcatcggggatataataatgcacggggacgtggcaaagataaaagacgatacactaatcgtcaaggtggtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="28031" stop="29439"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28339" g_stop="29139" g_length="801"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="822" r_length="800" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-U567069" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>801</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567069" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28339" e_stop="29139"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACGTTATCAGCACGAAGTTGCTACTTGCAAAGGTATTATATATAAATATTTTTATTTGATTCACATATTCTCTCATAATTT-CATTATGTCGAATTTATCCAAACTTGAGTTTGTGGCATTAGATATTTCTGGAAAGAATTATCTTTCATGGGTACTCGATGCTGAGATTCACTTGGCTGCTAAAGGTCTTGATGCCACTATTACTCAGGGAAATGAAGCATCGAGTCAAGATAAGGCGAAAGCTATGATTTTCCTTCGTCATCATCTTGATGAGGGCCTGAAGATTGAATATCTGACGGTGAAAGATCCACTTGAATTGTGGACTGATTTAAAGGGGAGATATGACCACCTAAAGGCAACAGTGTTGCCAAGAGCTCGTTATGAGTGGATGCATTTACGGTTTCAAGATTTTAAGACCGTAATTGAATACAACTCTGCTGTATTCAGGATAACCTCCCAGTTAAAATTATGTGGGGAGACTATAAAAGATGAGGACATGTTGGAAAAGACACTTACTACTTTCCATGCCTCAAATGTGATATTGCAGCAACAATATCATGAAAAGGGTTTTCAGAAATATTCTGAACTAATTTCATGTCTTTTGGTGGCTGAGCAACATAATGCTCTTTTAATGAAAAATCATGAAGCTCGTCCCACTGGAGCTGCTCCATTATCGGAGGCAAATGTAGTGGAAGCACGTGATCAATCTGAAGTAAAAAGAGATGATCATCGGGGCTATAATAATGCACGGGGACGTGACAAAAATAAAAGATGATACACTAATCGTCAAGGTGGTGG</genome_strand>
        <mrna_strand>AACACGTTATCAGCACGAAATTGCTACTTGCAAAGGTACTAT--ATAAATATTTTTATTTAATTCACATATTCTCTCATAATTTTCATTATGTCGAATTTATCCAAACTTGAGTTTGTGGCATTAGATATTTCTGGAAAGAATTATCTTTCATGGGTACTCGATGCTGAGATTCACTTGGCTGCTAAAGGTCTTGATGCCACTATTACTCAGGGAAATGAAGCATCGAGTCAAGATAAGGCGAAGGCTATGATTTTCCTTCGTCATCATCTTGATGAGGGCCTGAAGATTGAATATCTGACAGTGAAAGATCCACTTGAATTGTGGACTGATTTAAAGGGGAGATATGACCACCTAAAGGCAACAGTGTTGCCAAGAGCTCGTTATGAGTGGATGCATTTACGGTTTCAAGATTTTAAGACCGTAATTGAATACAACTCTGCTGTATTCAGGATAACCTCCCAGTTGAAATTATGTGGGGAGACTATAAAAGATGAGGACATGTTGGAAAAGACACTTACTACTTTTCATGCCTCGAATGTGATATTGCAGCAGCAATATCGTGAAAAGGGTTTTCAGAAATATTCTGAACTAATCTCATGTCTTTTGGTGGCTGAGCAACATAATGCTCTTTTAATGAAAAATCATGAAGCTCGTCCCACTGGAGCTGCTCCATTACCGGAGGCAAATGCGGTGGAAGCACGTGATCAATCTGAAGTAAAAAGAAATGATCATCGGGGATATAATAATGCACGGGGACGTGGCAAAGATAAAAGACGATACACTAATCGTCAAGGTGGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U589180" ref_strand="+" ref_description="SGN-U589180 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147822235|emb|CAN66208.1| (e_value=9e-35) hypothetical; ">
      <seq>gtacgaatttgctacttgcatagaaatctccaattgtcagttggattcaagatgagtaatggagatgtatacctttttcatagtgctactacacatacaatattaaaagaaaagaaaagaaatacttttctaatttggttatgaaaatgacatatgtcaacacaatatcaggtagtacaaaattaattgagagctctggaagagcgaccttattacaacctggagagacaatattggacatttgtaatgcattataccgtagtaagtcacaaagaaacttattaagtttcagagtaattcgccaaaatggctatcacgttgagacgactaatgaaggaaaggatgaatgcctttacattactacaattaatgtacagaagaaaattgtgcatgaaaaattacgtgcattttcttctaggttctactatacaagtgtaagtacagttgaatcacatgtcgtagtaaacaaaaggtttactaattttaatgattctattatttggtatgaccggttgggccatcccggatttaatatgatgcacagaatcattgagaattcacgtgggcacacctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="29334" stop="30483"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29638" g_stop="30183" g_length="546"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="574" r_length="551" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-U589180" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U589180" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29638" e_stop="30183"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATCCCCAGTTGACAGTTGGATTCAAGATGAGTAATGGAGATGTATGCCTTCTTGATAATGCTACAACGCATACAATATTAAAAGAAAAG---A-A-ATACTTTTCTAATTTGGTTATGAAAATGGCATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGCATTTTCTTCTGGGTTGTACTATACAAGTATAAGTATAGTTGAATCACATGCCATAGTAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATGACCGGTTGGGCCATCCTGGATTTAATATGATGCGCAAAATCATTGAGAATTCACATGGACACACCTT</genome_strand>
        <mrna_strand>AAATCTCCAATTGTCAGTTGGATTCAAGATGAGTAATGGAGATGTATACCTTTTTCATAGTGCTACTACACATACAATATTAAAAGAAAAGAAAAGAAATACTTTTCTAATTTGGTTATGAAAATGACATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGAGCTCTGGAAGAGCGACCTTATTACAACCTGGAGAGACAATATTGGACATTTGTAATGCATTATACCGTAGTAAGTCACAAAGAAACTTATTAAGTTTCAGAGTAATTCGCCAAAATGGCTATCACGTTGAGACGACTAATGAAGGAAAGGATGAATGCCTTTACATTACTACAATTAATGTACAGAAGAAAATTGTGCATGAAAAATTACGTGCATTTTCTTCTAGGTTCTACTATACAAGTGTAAGTACAGTTGAATCACATGTCGTAGTAAACAAAAGGTTTACTAATTTTAATGATTCTATTATTTGGTATGACCGGTTGGGCCATCCCGGATTTAATATGATGCACAGAATCATTGAGAATTCACGTGGGCACACCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U589179" ref_strand="+" ref_description="SGN-U589179 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147777887|emb|CAN77974.1| (e_value=4e-34) hypothetical; ">
      <seq>ggttatgaaaatggcatatgtcaacacaaaattaattgagggctctggaagagcgaccttattactacctggagggacaatattaagcattgataatgcattatattgtagtaagtctcaaagaaacttattaagtttcaaagttattcgccaaaatggctatcatgttgagacggctaatgaaggaaaggttgaatacctttacattactacaattaatgttgagaagaaaattgtgcatgaaaaattacctgcattttcttctgggttgtactatacaagtataagtacagttgaatcacatgccgtagtaaacaaaaggtttactaattttaatgattttatcatttggcatgacccggttggggccatcctggattta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="29476" stop="30440"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29759" g_stop="30140" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="382" r_length="382" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-U589179" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>382</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U589179" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29759" e_stop="30140"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGCATTTTCTTCTGGGTTGTACTATACAAGTATAAGTATAGTTGAATCACATGCCATAGTAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATGA-CCGGTTGGG-CCATCCTGGATTTA</genome_strand>
        <mrna_strand>GGTTATGAAAATGGCATAT--GTCAACACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGCATTTTCTTCTGGGTTGTACTATACAAGTATAAGTACAGTTGAATCACATGCCGTAGTAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATGACCCGGTTGGGGCCATCCTGGATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U599384" ref_strand="+" ref_description="SGN-U599384 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|15144516|gb|AAK84483.1| (e_value=7e-14) putative copia-like polyprotein [Lycopersicon esculentum]; ">
      <seq>ggcaagatttgctgattgtcattttgatgaatcagtatacccaacattagggggagaacataagtcattgggaaaagagatagattggaattcatcatctctatctcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="30651" stop="31359"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30951" g_stop="31060" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-U599384" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>110</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U599384" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30951" e_stop="31060"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCAAGATTTGCTGATTGTCATTTTGATGAATCAGTATATCCAACATTAGGGGGAGAACATAAGTCATTGGGAAAAGAGATAGATTGGAATTCATCATCTCTATCTCATC</genome_strand>
        <mrna_strand>GGCAAGATTTGCTGATTGTCATTTTGATGAATCAGTATACCCAACATTAGGGGGAGAACATAAGTCATTGGGAAAAGAGATAGATTGGAATTCATCATCTCTATCTCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U600220" ref_strand="+" ref_description="SGN-U600220 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|15144516|gb|AAK84483.1| (e_value=1e-14) putative copia-like polyprotein [Lycopersicon esculentum]; ">
      <seq>tcgaacaaaccaatgtgagcaagaagttcaaagaataatttatttgcagaacattgcaaatcaactaccagatgcatttactaatcttccaaggattactaaatcgcatattccagctgttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="30768" stop="31490"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31068" g_stop="31190" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-U600220" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>123</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U600220" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31068" e_stop="31190"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAACAAACCAATGTGAGCAAGAAGTTCAAAGAATAATTTATTTGCAAAACATTGCAAATCAGCTACCACATGCATTTACGAATCTTCCAAGGATTACTAAATCGCATATTCCAGCTGTTAA</genome_strand>
        <mrna_strand>TCGAACAAACCAATGTGAGCAAGAAGTTCAAAGAATAATTTATTTGCAGAACATTGCAAATCAACTACCAGATGCATTTACTAATCTTCCAAGGATTACTAAATCGCATATTCCAGCTGTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U586539" ref_strand="-" ref_description="SGN-U586539 Tomato 200607#2 [17 ESTs aligned] (*GB) gi|147822235|emb|CAN66208.1| (e_value=0) hypothetical; (*ATH) AT4G23160.1 (e_value=3e-64) | Symbol: None | protein kinase family protein, contains Pfam domain PF00069: Protein kinase domain | chr4:12129496-12134198 FORWARD | Aliases: F21P8.50, F21P8_50; (*SWP) sp|P10978|POLX_TOBAC (e_value=3e-87) Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum; ">
      <seq>ccaaaaaaaaaaaaaatattaaaaaatatatcatttcaaagtgtgtgtttatatgtttcatatagtggctatttatagccatacattaatgcatacaaggtcattagtgatgtcatattccacatgacactacaattattttacactacaattattttacaacactcccccttggatatctatgtaaaagaaagtacatagatatacataatacgctttatttgctgcctcattaaaaaccttaccaggaaaacccaacttgggacaaaaccatagttaaggaaaagagtacaacgcgtatttcactccccctgatgaaaactttacttgatatcttggagacggcgcattccaatcttgtatctcaacttctcaaacgttgatgttggcaatgcctttgtgaataaatcagcaagattatcacttgaacgaatttgttgaacttctatctcaccattttgttgaagatcatgcgtgaaaaagaactttggtgagatatgctttgtccggtctcctttgatgtatcctcctttcaattgagctatacatgcagcattatcttcgtacattgtggttggtatattctttttcaaagaaaaaccacacatttcctcaatatgatgggtcattgatctcaaccagacgcactctcgacttgcttcatggatggctattatttctgcatgatttgaagaagtggctaccaacgtttgcttcattgatcgccaagatattgccgtgtctccacatgtaaacaaatagcctgtttgtgatcgggctttatgcggatctgataaataccctgcatctgcgtaaccaatcagttctgatttggattcattggaatagaataaacccatgtccatggtccctcgaagatatcgaagtatgtgtttaacaccattccaatgtctttttgttggggaggaactgaatcttgccagtagacttactgcaaaacagatatctggtcgagtattgttagcaaggtacattagtgccccgatcgcactaagataaggagtttcatcaccaagaagctcttcatcattctcttgaggtcgaaatggatctgtattgatgtcaagcgatcttaccaccattggagtactcaatggatgtgagttatccatgtaaaaacgctttagtatcttttctgtgtacgttgattgatgaacaagtattccatttgacaaattctcaatctgtaggccaagacaaaattttgtcttgccgagatctttcatttcaaattcttttttcagacactcaatagcttctaaaagctctttaccagtgccaatgatgttcaaatcatcaacatacacagctattattacaaattcagaccccgaccgtttaataaaaatgcagggacaaatcgggtcatttttgtaccctttctttaacaaatattcactcagacgattgtaccacatccttcctgattgtttcaatccatacagagatttctgaagttttattgaacaagtttctcttgaatctttgtatgcttcaggaactttgaatgcttcaggaattttcatgaaaatgttgtggtccaatgagccatatagataggctgtgacaacgtccattagacgcatttcaagtttttcatgaactgccaaatttatgagatatctgaaggtgattgcatctaccactggagaatatgtctccatataatcaatgccaggtctttgagaaaaaccttgagcaacgagtcgggccttatatctcatgacttcatctttctcatttcttttccgtacaaaaacccatttgtaccccactggcttgataccttcaggtgttcggattatcggtccaaaaacttcacgtatttctagtgaagccaattcagcttgaattgcatccttccattttggccaatcatttctctgtctacattcgtgaacagattttggctcaaaatcttcatattgttgcattatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="33638" stop="31201"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33351" g_stop="33309" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="185" r_length="43" r_score="0.767"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33308" i_stop="33250" i_length="59">
            <donor d_prob="0.000" d_score="0.77"/>
            <acceptor a_prob="0.000" a_score="0.76"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33249" g_stop="31501" g_length="1749"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="1961" r_length="1776" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-U586539" ref_strand="-">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>1792</cumulative_length_of_scored_exons>
        <coverage percentage="0.914" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U586539" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="33351" e_stop="33309"/>
          <exon e_start="33249" e_stop="31501"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAATTCAATGGATTTATAACACTCCCCCTTGGATGTCCATAGATTATGTGCCTCGTTAAAACCTTACTAGGAAAAACCCAGTGGGAAAAAGCCTAGAGAAGGAAAAAGAGTACACATATCT-CATAATACGCTTTGAATGTTGCCTCATTAAAAACCTTACCAGGAAAACCCAACTTGGGACAAAACCATAGTTAAGGAAAAGAGTACAACGCGTATTTCGCTCCCCCTGATGAAAACTTTACTTGATATCTCGGAGACGGCGCATTCCAATCTTGTATCTCAACTTCTCAAATGTTGATGTTGGCAATGCCTTAGTGAATAAATCAGCAAGATTATCACTTGAACGAATTTGTTGAACTTCTATCTCACCATTTTGTTGAAGATCATGCGTGAAAAAGAACTTTGGTGAGATATGCTTTGTCTGGTCTCCTTTGATGTATCCTCCTTTCAATTGAGCTATACATGCAGCATTATCTTCATACATTGTGGTTGGTATATTCTTTTTCAAAGAAAAACCACACATTTTTCTGAATATGATGGGTCATTGATCTCAACCAGACGCACTCTCGACTTGCTTCATGGATGGCTATTATTTCTGCATGATTTGAAGAAGTGGCTACCAATGTTTGCTTCATTGATCGCCAAGATATTGCCGTGTCTCCACATGTAAACAAATAGCCTGTTTGTGATCGAGCTTTATGCTGATCTGATAAATACCCTGCATCTGCGTAACCAATCAATTCTGATTTGGATTCATTGGAATAGAATAAACCCATGTCCATGGTCCCTCGAAGATATCGAAGTATGTGTTTAACACCATTCCAATGTCTTTTTGTTGGGGAGGAACTGAATCTTGCCAGTAGACTTACTGCAAAACAGATATCTGGTCGAGTATTGTTAGCAAGGTACATTAGTGCCCCGATTGCACTAAGATAAGGAGTTTCATCACCAAGAAGCTCTTCATCATTCTCTTGAGGTCGAAATGGATCTGTATTGATGTCAAGCGATCTTACCACCATTGGAGTACTCAATGGATGTGAGTTATCCATGTAAAAACGCTTTAGTATCTTTTCTGTGTACGTTGATTGATGAACACGTATTCCATTTGACAAATTCTCAATCTGTAGACCAAGATAAAA---T-T-TT-----G----------------TC--TTTTCAGACACTCAACAGCTTCTAAAAGCTCTTTACGAGTTCCAATGATGTTCAAATCATCAACATACACAGCTATTATTACAAATTCAGACCCCAACCATTTACTGAAAATGCAGGGACAAATCGGGTCATTTTTGTACCCTTTCTTTAACAAATATTCACTCAAACGATTGTACCACATCCTTCCTGATTATTTCAGTCCATACAGAGATTTCTGAAGCTTTATTGAACAAGTTTCTCTTGAATCTTTGTATGTTTCAGGCACTTTAAATGCTTCAGGAATTTTCATGAAAATGTTGTGGTCCAATGAGCCATATAGATAGGCTGTGACAACGTCCATTAGACGCATTTCAAGTTTTTCATGAACTGCCAGATTTATGAGATATCTAAAGGTGATTGCATCTACCACTGGAGAATATGTCTCCATATAATCAATGCCAGGTCTTTGAGAAAAACCTTGAGCAACGAGTCGGGCCTTATATCTCATGACTTCACCTTTCTCATTTCTTTTTTCGTACAAAAACCCATTTGTACCCCACTGGCTTGATACCTTCAGGTGTTCGGATTATTGGTCCAAAAACTTCACGTTTTTCTAGTGAAGCCAATTCAGCTTGAATTGCATCCTTCCATTTTGGCCAATCATTTCTCTGTCTACATTCGTGAACAGATTTTGGCTCAAAAACTTCATCTTGTTGCATTATTTC</genome_strand>
        <mrna_strand>ACACTACAATTATTTTACAACACTCCCCCTTGGATATCTATGT...........................................................AAAAGAAAGTACATAGATATACATAATACGCTTTATTTGCTGCCTCATTAAAAACCTTACCAGGAAAACCCAACTTGGGACAAAACCATAGTTAAGGAAAAGAGTACAACGCGTATTTCACTCCCCCTGATGAAAACTTTACTTGATATCTTGGAGACGGCGCATTCCAATCTTGTATCTCAACTTCTCAAACGTTGATGTTGGCAATGCCTTTGTGAATAAATCAGCAAGATTATCACTTGAACGAATTTGTTGAACTTCTATCTCACCATTTTGTTGAAGATCATGCGTGAAAAAGAACTTTGGTGAGATATGCTTTGTCCGGTCTCCTTTGATGTATCCTCCTTTCAATTGAGCTATACATGCAGCATTATCTTCGTACATTGTGGTTGGTATATTCTTTTTCAAAGAAAAACCACACA-TTTCCTCAATATGATGGGTCATTGATCTCAACCAGACGCACTCTCGACTTGCTTCATGGATGGCTATTATTTCTGCATGATTTGAAGAAGTGGCTACCAACGTTTGCTTCATTGATCGCCAAGATATTGCCGTGTCTCCACATGTAAACAAATAGCCTGTTTGTGATCGGGCTTTATGCGGATCTGATAAATACCCTGCATCTGCGTAACCAATCAGTTCTGATTTGGATTCATTGGAATAGAATAAACCCATGTCCATGGTCCCTCGAAGATATCGAAGTATGTGTTTAACACCATTCCAATGTCTTTTTGTTGGGGAGGAACTGAATCTTGCCAGTAGACTTACTGCAAAACAGATATCTGGTCGAGTATTGTTAGCAAGGTACATTAGTGCCCCGATCGCACTAAGATAAGGAGTTTCATCACCAAGAAGCTCTTCATCATTCTCTTGAGGTCGAAATGGATCTGTATTGATGTCAAGCGATCTTACCACCATTGGAGTACTCAATGGATGTGAGTTATCCATGTAAAAACGCTTTAGTATCTTTTCTGTGTACGTTGATTGATGAACAAGTATTCCATTTGACAAATTCTCAATCTGTAGGCCAAGACAAAATTTTGTCTTGCCGAGATCTTTCATTTCAAATTCTTTTTTCAGACACTCAATAGCTTCTAAAAGCTCTTTACCAGTGCCAATGATGTTCAAATCATCAACATACACAGCTATTATTACAAATTCAGACCCCGACCGTTTAATAAAAATGCAGGGACAAATCGGGTCATTTTTGTACCCTTTCTTTAACAAATATTCACTCAGACGATTGTACCACATCCTTCCTGATTGTTTCAATCCATACAGAGATTTCTGAAGTTTTATTGAACAAGTTTCTCTTGAATCTTTGTATGCTTCAGGAACTTTGAATGCTTCAGGAATTTTCATGAAAATGTTGTGGTCCAATGAGCCATATAGATAGGCTGTGACAACGTCCATTAGACGCATTTCAAGTTTTTCATGAACTGCCAAATTTATGAGATATCTGAAGGTGATTGCATCTACCACTGGAGAATATGTCTCCATATAATCAATGCCAGGTCTTTGAGAAAAACCTTGAGCAACGAGTCGGGCCTTATATCTCATGACTTCATCTTTCTCATTTC-TTTTCCGTACAAAAACCCATTTGTACCCCACTGGCTTGATACCTTCAGGTGTTCGGATTATCGGTCCAAAAACTTCACGTATTTCTAGTGAAGCCAATTCAGCTTGAATTGCATCCTTCCATTTTGGCCAATCATTTCTCTGTCTACATTCGTGAACAGATTTTGGCTCAAAATCTTCATATTGTTGCATTATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U564557" ref_strand="+" ref_description="SGN-U564557 Tomato 200607#2 [8 ESTs aligned] (*GB) gi|119720790|gb|ABL97965.1| (e_value=1e-50) putative; (*ATH) AT1G27970.1 (e_value=2e-52) | Symbol: None | nuclear transport factor 2 (NTF2), putative, similar to Swiss-Prot:P33331 nuclear transport factor 2 (NTF-2) (Nuclear transport factor P10) (Saccharomyces cerevisiae) | chr1:9746798-9748006 FORWARD | Aliases: F13K9.26, F13K9_26; (*SWP) sp|Q9C7F5|NTF2_ARATH (e_value=1e-51) Nuclear transport factor 2 OS=Arabidopsis thaliana GN=NTF2; ">
      <seq>gaatcagctcagacaataagagcgcgcggcgcagtcataaaaagggctctttcaatagccagtagcgtactgttggacttgagttgacacacgcaaatcagagtgagaagtagagcgaccgattttccgatttgctaatggatcccgacgccgtagcgaaggcatttgtggactactactacaccaccttcgataccaatcgggctggacttgctagcgtctaccaggaaagctctgtactgtcttttgagggtcagaagtatcaggggactcaaagtatctccggtaagctcaccggtctacctttccagcagtgcaagcaccagatcaacaccgttgattgtcagccctctggtgctgccgggggaatgcttgtctttgtcagcggcaatctcagccttccaggcgaacaacacaccctcaagttcagtcagatgtttcacttgattccaacacaaggaggaagtttctacgtgcagaatgacatatttcgcttgaactatgcttgaagggttctgcgttcaattatctcctggtcatattttcttgattgattcgacaaagatagtattatagcaagatattgcttccatttcacagtcattgagagactattttttcctgtaatggtttagtgaattgattgatgaacttggcttccctcagagtttaatggaattgaacgaggctttaagaagattgttatcaaaaaatgatttcttgccaaagcattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="39771" stop="43069"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40070" g_stop="40503" g_length="434"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="434" r_length="434" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40504" i_stop="42469" i_length="1966">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42470" g_stop="42769" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="435" r_stop="734" r_length="300" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-U564557" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>734</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U564557" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40070" e_stop="40503"/>
          <exon e_start="42470" e_stop="42769"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATCAGCTCAGACAATAAGAGCGCGCGGCGCAGTCATAAAAAGGGCTCTTTCAATAGCCAGTAGCGTACTGTTGGACTTGAGTTGACACACGCAAATCAGAGTGAGAAGTAGAGCGACCGATTTTCCGATTTGCTAATGGATCCCGACGCCGTAGCGAAGGCATTTGTGGACTACTACTACACCACCTTCGATACCAATCGGGCTGGACTTGCTAGCGTCTACCAGGAAAGCTCTGTACTGTCTTTTGAGGGTCAGAAGTATCAGGGGACTCAAAGTATCTCCGGTAAGCTCACCGGTCTACCTTTCCAGCAGTGCAAGCACCAGATCAACACCGTTGATTGTCAGCCCTCTGGTGCTGCCGGGGGAATGCTTGTCTTTGTCAGCGGCAATCTCAGCCTTCCAGGCGAACAACACACCCTCAAGTTCAGTCAGGTACTTCTTCTAGTACTACTACTACTCCATTTGATTATTTTCAGGACTGCTTTCCCATTGTTACATTGACGAGCCATGTGGTTAGGGTTAAATCGCTTGTCTGTATCAGATGCTGTTAGGGTTTAATTTTGCGTGTTTTAGTTTGTGTTTGATCCATTCATTAGTTGATTATTCATTGCGGCTTTCTTATTGAATCTTAAATGGCTTACTTAATCAAAGGGAATAAGACGACTTGATTTTCATTTCTGAATATTAGTGCATTGGAGTACCGTCCTTATACATGAATGTAATTATCACTGCAATAGACTTGTAGTACTTTATGGAGTGTATACCACTAGTTCACTGTTTAACCATTTGTGGATTGCTTAATTGGTTGTCCTTGTGGTAGGGAAATGGGACTACATGAGATTCTCAAATTTGAATAAGGCAGGTGGAGTTTTGTTTTTCAGTTGCTATTATTTGAAGGGACAAACTAGATTCTATGGTCTTAAGAATCAATGGTTTAATGTAAGATTGTGACACAAACTACCCGCTAGTGTGGCCTTGATCATATCACTATTCTAGTATGATAGCTGAATTACATGGTGAAGAGAACTCTGCAGTTTCTTAAGAAGCCATTAAGGAATCCGTGTGTACTGTGATATCATACGATAGTCCATTATTTTCCCTCGATCAGTTGTTTGTTTTATTCATTTAACTTTGTATTGTATGAAGACGAGTTCTCTTGGATTAAGTGTGGTAGCCTTACTCATATTTTTTAAGTTTAGGCCATTTCGTTTTAACTTGAAAATGTTGTTTACTTGTGTACCACTAGATTCTGACTGTTCTAACAAGATTCCTTATGGATATGCAAATACATTTGAATTCTACTGTCTTAGAGTTCAACCTATGTACATGTGCTTTAAGTGCTCCTTCTTCATGGTCTTTTTCTTGATGCGACTTTTTTCAATAGTTCAAGGAAAAGTTCCTAAACATAAAAAATAATGTGTTGCTTGTTTCTATAATTATTTGATTGGATTGACTGGCCCAACTTTGCAATTATTCGATAGAATTCACTTTGTGTGTGTTTAAGTGCTCTTTCCTCCTTGTCTTTATCGATGATATCACTTCTTTCAACAACGTGAACAGAAAAACGTGTGTTCAAAAAGTAAAATGAATGGTGTGGCTCTATTATTATTTGATTTGGCAGAAAATGGAAATTGAATACTCTTATATTGCTCTATAAATTCATCAGATAAACTTAGCAAAAATGTAAATCTCTTGGCTCTCCACATTGTGAACACCCTTATATTGCTCCAGCCTCATCGAACAATAGAATGCATTAATGAACAGTTTAATTGGGAAGGTTGTTATACTAGACTGAAGAAGGGTCAGAGAAAGTCTTATAATGGTAGAGTATCGTGCTTTGACTAATTTTGATGTTTTTCTTTTGGACTACACATCTAATGTTTGATCATTTGGTCTTGTGTTGCTACTTTATGTTTGAAAAACAACTAGCTTTGACATTATCGCTTACGAGAAAAATGAAATAAAGAATCAACTAGTTTTTGCAGAGAACTTTCCTGTCTTTCCAAAGCAAAAAATGATTGTTTTCGTTTCCAATGTTCATTACAAAAATTGATCATTATTTGAATTGGTGGTTTTGGCTCAATACTGTTAACTGGTTATGTAGACAGATTTTCTTGCATCGTTGCGTACATATTTAAGGAGATGATAAAGGATATTTGTTGATTTTCTCTTTCTTATTTATTCTACTTTGTATTCTCATTCCTCTTGCACCTGATCTTACTTTCCAAGCACATAGTGTGCTTTTCCGTTTGCTTGTTTCAGAAGGAACGGTCTGTGATGAATTTGTTGTTTTATAATTTCGTATTGAAAAGGTTCATATTTTCAAGTTTTCAACGTTTCAAAGTTATACACATATCAAATTTATAATGTTATGCTTCTATCCTTTCATGGACTGCAGATGTTTCACTTGATTCCAACACAAGGAGGAAGTTTCTACGTGCAGAATGACATATTTCGCTTGAACTATGCTTGAAGGGTTCTGCGTTCAATTATCTCCTGGTCATATTTTCTTGATTGATTCGACAAAGATAGTATTATAGCAAGATATTGCTTCCATTTCACAGTCATTGAGAGACTATTTTTTCCTGTAATGGTTTAGTGAATTGATTGATGAACTTGGCTTCCCTCAGAGTTTAATGGAATTGAACGAGGCTTTAAGAAGATTGTTATCAAAAAATGATTTCTTGCCAAAGCATTG</genome_strand>
        <mrna_strand>GAATCAGCTCAGACAATAAGAGCGCGCGGCGCAGTCATAAAAAGGGCTCTTTCAATAGCCAGTAGCGTACTGTTGGACTTGAGTTGACACACGCAAATCAGAGTGAGAAGTAGAGCGACCGATTTTCCGATTTGCTAATGGATCCCGACGCCGTAGCGAAGGCATTTGTGGACTACTACTACACCACCTTCGATACCAATCGGGCTGGACTTGCTAGCGTCTACCAGGAAAGCTCTGTACTGTCTTTTGAGGGTCAGAAGTATCAGGGGACTCAAAGTATCTCCGGTAAGCTCACCGGTCTACCTTTCCAGCAGTGCAAGCACCAGATCAACACCGTTGATTGTCAGCCCTCTGGTGCTGCCGGGGGAATGCTTGTCTTTGTCAGCGGCAATCTCAGCCTTCCAGGCGAACAACACACCCTCAAGTTCAGTCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTTCACTTGATTCCAACACAAGGAGGAAGTTTCTACGTGCAGAATGACATATTTCGCTTGAACTATGCTTGAAGGGTTCTGCGTTCAATTATCTCCTGGTCATATTTTCTTGATTGATTCGACAAAGATAGTATTATAGCAAGATATTGCTTCCATTTCACAGTCATTGAGAGACTATTTTTTCCTGTAATGGTTTAGTGAATTGATTGATGAACTTGGCTTCCCTCAGAGTTTAATGGAATTGAACGAGGCTTTAAGAAGATTGTTATCAAAAAATGATTTCTTGCCAAAGCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U574596" ref_strand="+" ref_description="SGN-U574596 Tomato 200607#2 [13 ESTs aligned] (*GB) gi|157341132|emb|CAO49039.1| (e_value=3e-95) unnamed; (*ATH) AT5G14100.1 (e_value=1e-91) | Symbol: None | ABC transporter family protein, contains similarity to ABC transporter, ATP-binding protein | chr5:4549440-4551845 REVERSE | Aliases: MUA22.10, MUA22_10; (*SWP) sp|Q8LEF6|NAP14_ARATH (e_value=1e-90) Non-intrinsic ABC protein 14, chloroplastic OS=Arabidopsis thaliana GN=NAP14; ">
      <seq>cnnnnnnnnnnnnnttacggccgggggttcatcttcccctcaattttctctggttacatttttgttccgcaggctctgagatcagaaaatgggaagcgttccacttccctcgtcgtctctactaatttccagctccagttcctccatttttggaagatcatcatcgacaatttcctatcctcaccggcgattcagaaaggtggatgtttcctgcgattactcttgtttcgaaataagggatgtctcttatcgacctccaggaaccaagatcgatctactgagtcaagtcaacctttccatccctgagaaaagttttggcttgatatttggacggagtggcagtggaaaaactactttattgcagctgattgcagggttaagcaaaccaacatcaggttcaatatatgtgcaaagatatggtgatgatgatcaacagattaagtctcctgaacccttacaacctgaaagagttggcattgttttccaatttcctgagagatactttgttgcggacactgttcttgatgaagttacatttgggtggccaagacaaaagggtggcctacaattaagagagcttcttgcttctagacttcaaaaggccattatgtcggttggtctaacaggaatatctttggataaggatccccattcattaagcggtggttacaaacgtcggctagcccttgctattcagttagttcaaacaccagatttattaatattggatgagcctcttgctggtcttgattggaaggctcgtgcagatgtggcaaaattgttaaaagatctgaagaaggagctaactttacttgttgtcagccatgacctcaaggagttggcatctttggtagatcaatcttggaggatggaaatgggaggagcacttaaaaaagagcctctacccatttaatgcactgaacttataatgttcccaacaatcattttctgatgtaatatatgaggtttttatgagccttgaattgcatacaattcttggagaggtgctcaaggttattgattttgcttcaatccctgaccatcgaggtcttcacatttcatgtaacctctgtaatgtaattaacagtttctgtaatgagttttgagatggtttctaattttctgtacacttagttcgccgtttaaactctcattaaagtttgatgggtctgcagcatttctttgtccttgtctctcaccaaaagttttgaatgttgattggaattttgttcaaaatatgtatagtagtatgcatgtattggtaaattaaattacactgttgacatatatgaatagtagcttttctagttgtgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="51857" stop="59752"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52157" g_stop="52325" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="195" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52326" i_stop="52421" i_length="96">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.871" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52422" g_stop="52458" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="232" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52459" i_stop="53495" i_length="1037">
            <donor d_prob="0.960" d_score="0.00"/>
            <acceptor a_prob="0.782" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53496" g_stop="53575" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="312" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53576" i_stop="53886" i_length="311">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.885" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="53887" g_stop="53938" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="364" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="53939" i_stop="54052" i_length="114">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="54053" g_stop="54186" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="498" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="54187" i_stop="54511" i_length="325">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="54512" g_stop="54626" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="499" r_stop="613" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="54627" i_stop="54742" i_length="116">
            <donor d_prob="0.867" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="54743" g_stop="54829" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="614" r_stop="700" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="54830" i_stop="54966" i_length="137">
            <donor d_prob="0.574" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="54967" g_stop="55015" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="701" r_stop="749" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="55016" i_stop="56206" i_length="1191">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.607" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="56207" g_stop="56291" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="750" r_stop="834" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="56292" i_stop="57537" i_length="1246">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="57538" g_stop="57668" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="835" r_stop="965" r_length="131" r_score="0.992"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="57669" i_stop="59101" i_length="1433">
            <donor d_prob="0.744" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="59102" g_stop="59452" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="966" r_stop="1315" r_length="350" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-U574596" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>1290</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U574596" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52157" e_stop="52325"/>
          <exon e_start="52422" e_stop="52458"/>
          <exon e_start="53496" e_stop="53575"/>
          <exon e_start="53887" e_stop="53938"/>
          <exon e_start="54053" e_stop="54186"/>
          <exon e_start="54512" e_stop="54626"/>
          <exon e_start="54743" e_stop="54829"/>
          <exon e_start="54967" e_stop="55015"/>
          <exon e_start="56207" e_stop="56291"/>
          <exon e_start="57538" e_stop="57668"/>
          <exon e_start="59102" e_stop="59452"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCATCTTCCCCTCAATTTTCTCTGGTTACATTTTTGTTCCGCAGGCTCTGAGATCAGAAAATGGGAAGCGTTCCACTTCCCTCGTCGTCTCTACTAATTTCCAGCTCCAGTTCCTCCATTTTTGGAAGATCATCATCGACAATTTCCTATCCTCACCGGCGATTCAGGTGAGTCTCGCTCCTTTAGTTTTTTCTCCGGTTCTTACTGGAAGTGGATACTATAATTTCAGAATTTTCAGCTGAATTTTCTCATTTCTATTACAGAAAGGTGGATGTTTCCTGCGATTACTCTTGTTTCGAAGTAAAGCCCTCTTACCTTTCAACTTTTTAATGGCCATCGTTTTGTACTGTTTTCTAGTATATAACTATATATTATCCTAATTTTAGTTAAATTGATTCATGTAAAGTTCAACGTTGTTTGCTTGCCTACATTTACGATTTTGATTAACCGAATATTCACCTACTCCATTAGTCACGCTATAATTCTTCTTACAAATCATAGGTATTTATTTGTTATAATTGTATCTCTCTGTATCCCGGTTTACTCTTTTCTTCATTATTTGTTTGCTTTCTTTTCTCTGGGTTTAGGGATACTCGATAGCTTCGGTTGTTATGAATTTGCTAACTTCTTAGGTTCAGAGGTTCAGTCTATCTGAAGGAGTTTGGTGGTATTTGAGCTTTTCTGGAACTTGATAACTATTGCAGGCGCTTTGTATCATCTATATACGAGCAGAAGCAATGGATATATCACAGGCTTCCTCTTTTTTCTCTTCTTCTAGGTGACAGCAGTGGCTAAGCCATTAATTCTGATAAGGGGATTCATAAAGAAGAAAAATACAAAATGGCATGCTGATTTGTACCTTTCTACTCTTATGTATAGGGAATTTGAGATCTTTTTTGAACAAGAAAACATAATTTTCACCTATTTGCTAGTTTAACTTCCTGACAATTGAATTCCTTTCGTAGTGTATGGCTCCGTCACTGGACTGGCGGAGAAAGGAGTTATGTTAATTAAGTGGCGAGAACTTATTCTGTAACATATACACTCTTTAACCAAAAAGTCATTCAACAACTTTTTATTAAATTCCCAAATGATTTCTCTTTCTTCAATTTTCCATACCTTAGAGGTTAATAAGTATTAGAAACATGGTATTCCGATAACTCTAGTTCTATCAGAAGTTACAAGGCATGCTACATGCTGAACTCAAATTCAGTCAGTTTTTCTCTTTATAATTTATCTATTTTGGCTGTCCAGAGATTATTGAACATATTGTGGTTGTATAGTGGAGGTGGTAATAATAGATGTGTAATCTTTTTCTTTTTTTTATGGATTTGGAGATAAGGGATGTCTCTTATCGACCTCCAGGAACCAAGATCGATCTACTGAGTCAAGTCAACCTTTCCATCCCTGAGAAAAGGTACAGTCTGTTGCTAAAATTCAAATACACTACATTCCATTACCGCTGGGAAGTTCTTTGTCATCTTTCCAACTGATCCTGCTAAGAGCTAACTAGAGATTATATTGTCCATTTTCTTGATTGGATAGAAGCACACATGAGATCAGAATCCACTGTTTTCATATAGTTTTTGAATGTCCTAACTGTTAATAATATATGTAAAGACATTTCAAGCTGTCTACAGAACAGTATCACTACAAAGAAACTAGAATCTCAAATGCTGAAATGCATTTGAAGAGGCTCTGTGTGGATTTGACATGGATCTTTTGTAGTTTTGGCTTGATATTTGGACGGAGTGGCAGTGGAAAAACTACTTTATTGCAGGTGTTCCTTTTGATTTTGTCTTTATATTCAAATTCATTATAGTTTTTCTCCTTTCAACCTCCAAATGTTACCTTGTTCAGGCTTGTTTTTTTATCTTGGACGTTCTCCATGCAGCTGATTGCAGGGTTAAGCAAACCAACATCAGGTTCAATATATGTGCAAAGATATGGTGATGATGATCAACAGATTAAGTCTCCTGAACCCTTACAACCTGAAAGAGTTGGCATTGTTTTCCAATTTCCTGAGAGGTATTCATTTATTGACTGTGTGTTTCATGTACTGTTAGGATGTTCTTTGCGATACAGTGCAATTTTAATCTTGAGGTTCATAATAAACAGTATGCATTTTCATTTGCTGTTTTTACTGAAAAGACAAAAGCTCCTCCAGTTATCAATTTATTCCAGGTGCAGATTATATGAATCATCAGCATTGCGATTATCTAAACACTATTTTGTTTACCTCTCAATTTTGGTGTTATTGCATGTGTTAGGTAGGAATATGAAATTTAAACAGTTCTTTTTGGTTCCAACAACAGTTTATTTAACTTGATTTGTCTGTTTCACTGTTCTACAGATACTTTGTTGCGGACACTGTTCTTGATGAAGTTACATTTGGGTGGCCAAGACAAAAGGGTGGCCTACAATTAAGAGAGCTTCTTGCTTCTAGACTTCAAAAGGCCATTATGTCGGTATATTCCTTTTAAGTGTGATTTAAACTGTCATTTAATTTTCTATTCCAAAGGAGAAAAGCTCGTCTGCTTTCCAGCAAATCATGACAGCTTTTTATGTGGTTGATAACTCCTAGGTTGGTCTAACAGGAATATCTTTGGATAAGGATCCCCATTCATTAAGCGGTGGTTACAAACGTCGGCTAGCCCTTGCTATTCAGTTAGTAAGGATTTCTCATCTATGAAAAATAGGAAGTGTATATGTGCATTTGTATAAACATGTGTATGCCTATTTGTGTGCAAAATATTATTGATATTTTGATTGATCATCTGTCTGTTAATATATTTTCTCTTTGCACAGGTTCAAACACCAGATTTATTAATATTGGATGAGCCTCTTGCTGGTCTTGGTATGAAGAAACTTTCTATGATCTATTTCATTTTATTTTTTTGGTTTACCTTTTTTTTTTTCCTTTTGATGTTTTTCCCTTATTAGGTGTTTGATTCATCAGTTTGTTATTCTCCCACGTAAGTATGCTTTTAGTACAACAAGAGTTCTGGCTTTACAGAACAAGAATAGTTGTGATTTCTAGGTTAGGTTAAAGATGAAAAGGGTACAGAGGGAATTGCTATGCCTGCACAAGCATTTTACTTTTGTTATATTTGATGAACAACCCTTTTTCTCACCATGGTTATTGAAGTCTTGATTCCATCTTCCATATTCTGTAATCTGAGTAGTCTGTTCTTACAAAAGTCCTAACATGTTATCTTATGACAGAGACACCAAGATTGTCAACTCTTAGTAAACCCTATAGGCTGAGCTGCTAATAATGACAAACAAGTAAGAATAGGACGAGTAGTTAGCTTTGGTAATATAAAGAATAGAGTCAGAGGTTATGCTACCTGCTTTTACTTTATGAAGAATATGCTGAATGTAAATCTTTCTGCCATAGAATATTAATATTCTATGTTAGGTTGCAAATTCTCCAGAACTAAAGGTAACCAGGGTGGGATCTCTATATCTATTTTAGAGGAACTCTTCTTTGGCTTCACTTAAAAGCAATTTTTTTTGCTTCTTCTTGTAGAAGCTCAGAGTTCCTTGTAGGGCTATCAGATCTTATTCACCAAATATACATCGATGTACACATTGTTGTGTTAGAACACTCTTTCTGCTATCTGTGTACTAGCTCTCATATTTGCTTTTGCTGATATTTTACAAGGGCTATTTTGAAATTTTTTATATAGTTAATTCTTTACTATGGTTGGTACAAGTGAAGTTCAAGAGCTTGCCAATTAGATCATACCTCTCTTTGGATTGCATGTAGTATAATGGTAGTGAGTCTTGGTTGTATTAAGCAGCAGGACTGTTTTATGGAGTGAAGCTATTCCCACAAAGATTTTGAAAGCTTATTTTACTATTTCTTTTGTTTGGTATGATATAGCTAGCCTAGTCCTTTTTAAAAATGAAATACTTGTTTTTAAATATAGATTAGTTATTAGATGGACAATTTTTTTTTTTGTATTTTTTGGCTCCACTTCAACTATATTTGAGTACCTAATCTCAGTTTCTAAAAAAGTTCATTGTTTGTGAGGGAAATCAGATTGGAAGGCTCGTGCAGATGTGGCAAAATTGTTAAAAGATCTGAAGAAGGAGCTAACTTTACTTGTTGTCAGCCATGACCTCAAGTAAGTTCCTGATTAGGTCCATTTGTTATTGTTGTTTACATATGTTATTTTATTGGAAATGAATCATCATACTAGATGTCTAACATTATTCACTTGAGGTTTTTATTGATGTCGAGAAAATTTATCGACACTTATTGGTGACGTCGTGAAGGAAGTCAATTATCCATAACTTGTGAACTCTGGAAACTTTTCACAGACTCCCTGTCCCTTTTTCTTGATAACTGGAAAATCCATCGTTTGCCACTTCCAGACTTGGTGGATACTGGGATTTTTCCTCTACCCTACTCCACTAGGCTTGGATCATCAGTCCGGATTCAAACTCCTGCTCTGCTACTACCATACAAGCCGCATATACTACCTTGGCCACTTCCTTGGTCACATATGGTGGTCCCATAGTGATATCAGGTGTCATGATAGAGAAATATTTGTTTACTCTCCGTTTCAAATTTCATAACTTGTTTGCTTCTACAATTTTTTAAAATGTAAAAACACTGAATTTGTATTTTTTTGATAATGTGTATTTCTGTAAGAGAAACAGCCAAAAAAAGAGATGCCTCCCCGGGTCAGCTCAATTTGCAAAGGTTGAGGGACTTGTATCTTGATTCACAAGTTTGATCCCCATGCCAAGAGAACTAAGTTCAATATTTTAGTGGAGAATGGTAGCACATCAGCCTAGAATTCCGAAGGCTGCAGCGGCCCAAAGGGTTGGCTCCGGACTGACTTCTTGATCTTAAAAAAAAAAAGAAGAAAAAAAAGGCAAACAACAGAGTAATTCTTCAAATGTTGAAAATGTAAAATTTGAGTGTGTCAAACTTTTAATAGTTTGCAATAAAAGGTGAAAACTTATCACAGAAAAGGGAAAACTAAAACAATCAATTTGAAATAGAAGGGGTAGATGATGTAAGGATATGCTTTTTTACGCTTACACAGTTGGCAATGTCTGATTAAAAGATTAATAAATCAATTGTGCCTCTACGCAAACTAGTTGGCTGGCTATATTTTTCACTGTTATCCTTAAAGGATTCAGAACTGCATAAGTGAGACAGAACTGCATTCAACTCTCAACTTAGCATAGTCATCATTATTTTGTTTCTGGTACTTCTATTTTCCTAGCAATTCATTTCTGGTTCTTGATTGATATTTAACTGATCGCAGCTGACTGTGAAGATGAGATATATGTACCCTGCTCTTATTGTATTAAAAATTTGGTTCCTTCTCTAATAGCTGCATTGGTGGTAATCTGTAGGGAGTTGGCATCTTTGGTAGATCAATCCTGGAGGATGGAAATGGGAGGAGCACTTAAAAAAGAGCCTCTACCCATTTAATGCACTGAACTTATAATGTTCCCAACAATCATTTTCTGATGTAATATATGAGGTATGACTACTCTATGAGGCCTATTTATCATCATGCTCTTTCAGTTATCGCTGATCTTGACTGGGAAAATGATAAGAGTTCAGGAGTAGCAAATGTGAATAACAATCACAAGATAAAAAATGAATGATTTTGCATCATCGGGAAGGGCTTTGTTGTGAAAGTTAGGATATGCCTTTCATGTACTCTCTTACTGTATTTAGTGCCTATCTCTCTATCAGGCTATCACACAGTATTCTCCTCTAGTTGTGATAGAAGATATATCTACTGATTGGTAAAAAAAGATGTATCTACACAATACAATTTCTAATATTTAGTATTCTTTTTGTATTAGTTTATATCTAGAAAGTTAAACTCTGCAAGAAGAGATAATTATTGCAGCCTCACCATAATGTGAGGATTCAGCGATTTAATGAACATCTTAGCATGACTAATTTCAGTGTCCTCATTGATGGATGAAATGAGTTACTGTCTTCTTATACGATCTCGGACAATGCTCACCTTGAGCTAGCATTGGGGTTTTCCTAATGTCCACTTTTCACAAGAATACTAATTCAACTATTATTAGCAGTACAACGATCACACTTAATGATTATAGCCCATTTCTCTTATATTAGCATTACACATGGAAGGAAGGAGGTACTCATTTGTTCTTCTGTGTTAACTTTTGCTCACACCTCCATACTACATACTCCTAATTATTAGTTGTATATAATACCATTAAAGCTCTTACACTAGATGCACATAGGATCATATTAACACTCTTTCTTGAACATTTTTCCGTCTGGAGCTCCATCACCCAGTCTGAACTACAAATTGAGATAAAAGACTGAGATGATGACACATGAGTATGTTTACGCAACAACAGAAGAGAATGACTGTAATTCTATGCAGTTTTACTTTGCAATCAGCATCTGTTTTAATCCAGTACCCTCTATCGCTGGTGAAGCATCATAACTTGTACCACTTGGTGATACTTGTAAGGTCTGGAAGCTTTTTATCGACTACACCACTTGCTCCAGGGTCCAGAGTTGCAAATCTTTCAGGAAATACTCTAGTTTGATCCTTTAGTTGATTGTTCTCATCTTTAATCCTTGAGGATGAACTCTCCTTTGAAACATTTTTAGGATCTACAACAATATTAAAATCTAGGTGTGAAGTGATATCCTCCACCAAGGTAGTCTACCCCTTGTACCCTTAATAGGATGAGATTTTCAAGAATGTTATGCAAGGCTGTACCCCTAAGAGGTCATAGATAGCAATTTCATTCCAGGTTATACTTGGATTACTTTGTTATATGATGTTTTAAAGAGCTAGATATTTTAATAGGATGCTTACACTTCTTGTCGCATATTAGTTCTTTATTTATGTTCTTTCTTTGCGTTTACCTTAGTTGATTCCAACAATCATTTTTGACAATTAGTAATTACTTGCAGGTTTTTATGAGCCTTGAATTGCATACAATTCTTGGAGAGGTGCTCAAGGTTATTGATTTTGCTTCAATCCCTGACCATCGAGGTCTTCACATTTCATGTAACCTCTGTAATGTAATTAACAGTTTCTGTAATGAGTTTTGAGATGGTTTCTAATTTTCTGTACACTTAGTTCGCCGTTTAAACTCTCATTAAAGTTTGAT-GGTCTGCAGCATTTTCTTTGTCCTCGTCTCTCACCAAAAGTTTTTGAATGTTTATTGGAATTTTGTTCAAAATATGTATGGTAGTATGTATGTATTGGTAAATTAAATTACACTGTTGACATATATGAATAGTAGCTTTTCTAGTTGTGTT</genome_strand>
        <mrna_strand>GTTCATCTTCCCCTCAATTTTCTCTGGTTACATTTTTGTTCCGCAGGCTCTGAGATCAGAAAATGGGAAGCGTTCCACTTCCCTCGTCGTCTCTACTAATTTCCAGCTCCAGTTCCTCCATTTTTGGAAGATCATCATCGACAATTTCCTATCCTCACCGGCGATTCAG................................................................................................AAAGGTGGATGTTTCCTGCGATTACTCTTGTTTCGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGGGATGTCTCTTATCGACCTCCAGGAACCAAGATCGATCTACTGAGTCAAGTCAACCTTTCCATCCCTGAGAAAAG.......................................................................................................................................................................................................................................................................................................................TTTTGGCTTGATATTTGGACGGAGTGGCAGTGGAAAAACTACTTTATTGCAG..................................................................................................................CTGATTGCAGGGTTAAGCAAACCAACATCAGGTTCAATATATGTGCAAAGATATGGTGATGATGATCAACAGATTAAGTCTCCTGAACCCTTACAACCTGAAAGAGTTGGCATTGTTTTCCAATTTCCTGAGAG.....................................................................................................................................................................................................................................................................................................................................ATACTTTGTTGCGGACACTGTTCTTGATGAAGTTACATTTGGGTGGCCAAGACAAAAGGGTGGCCTACAATTAAGAGAGCTTCTTGCTTCTAGACTTCAAAAGGCCATTATGTCG....................................................................................................................GTTGGTCTAACAGGAATATCTTTGGATAAGGATCCCCATTCATTAAGCGGTGGTTACAAACGTCGGCTAGCCCTTGCTATTCAGTTA.........................................................................................................................................GTTCAAACACCAGATTTATTAATATTGGATGAGCCTCTTGCTGGTCTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGAAGGCTCGTGCAGATGTGGCAAAATTGTTAAAAGATCTGAAGAAGGAGCTAACTTTACTTGTTGTCAGCCATGACCTCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTTGGCATCTTTGGTAGATCAATCTTGGAGGATGGAAATGGGAGGAGCACTTAAAAAAGAGCCTCTACCCATTTAATGCACTGAACTTATAATGTTCCCAACAATCATTTTCTGATGTAATATATGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTATGAGCCTTGAATTGCATACAATTCTTGGAGAGGTGCTCAAGGTTATTGATTTTGCTTCAATCCCTGACCATCGAGGTCTTCACATTTCATGTAACCTCTGTAATGTAATTAACAGTTTCTGTAATGAGTTTTGAGATGGTTTCTAATTTTCTGTACACTTAGTTCGCCGTTTAAACTCTCATTAAAGTTTGATGGGTCTGCAGCA-TTTCTTTGTCCTTGTCTCTCACCAAAAG-TTTTGAATGTTGATTGGAATTTTGTTCAAAATATGTATAGTAGTATGCATGTATTGGTAAATTAAATTACACTGTTGACATATATGAATAGTAGCTTTTCTAGTTGTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U574601" ref_strand="+" ref_description="SGN-U574601 Tomato 200607#2 [3 ESTs aligned] ">
      <seq>aattttctctggttacatttttgttccgcaggctctgagatcagaaaatgggaagcgttccacttccctcgtcgtctctactaatttccagctccagttcctccatttttggaagatcatcatcgacaatttcctatcctcaccggcgattcagaaaggtggatgtttcctgcgattactcttgtttcgaagtaaagccctcttacctttcaactttttaatggccatcgttttgtactgttttctagtatataactatatattatcctaattttagttaaattgattcatgtaaagttcaacgttgtttgcttgcctacatttacgattttgattaaccgaatattcacctactccattagtcacgctataattcttcttacaaatcataggtatttatttgttataattgtatctctctgtatcccggtttactcttttcttcattatttgtttgctttcttttctctgggtttagggatactcgatagcttcggttgttatgaatttgctaacttcttaggttcagaggttcagtctatctgaaggagtttggtggtatttgagcttttctggaacttgataactattgcaggcgctttgtatcatctatatacgagcagaagcaatggatatatcacaggcttcctcttttttctcttcttctaggtgacagcagtggctaagccattaattctgataaggggattcataaagaagaaaaatacaaaatggcatgctgatttgtacctttctactcttatgtatagggaatttgagatcttttttgaacaagaaaacataattttcacctatttgctagtttaacttcctgacaattgaattcctttcgtagtgtatggctccgtcactggactggcggagaaaggagttatgttaattaagtggcgagaacttattctgtaacatatacactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="51872" stop="53505"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52172" g_stop="52325" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="154" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52326" i_stop="52421" i_length="96">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.871" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52422" g_stop="53205" g_length="784"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="938" r_length="784" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-U574601" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>938</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U574601" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52172" e_stop="52325"/>
          <exon e_start="52422" e_stop="53205"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTCTCTGGTTACATTTTTGTTCCGCAGGCTCTGAGATCAGAAAATGGGAAGCGTTCCACTTCCCTCGTCGTCTCTACTAATTTCCAGCTCCAGTTCCTCCATTTTTGGAAGATCATCATCGACAATTTCCTATCCTCACCGGCGATTCAGGTGAGTCTCGCTCCTTTAGTTTTTTCTCCGGTTCTTACTGGAAGTGGATACTATAATTTCAGAATTTTCAGCTGAATTTTCTCATTTCTATTACAGAAAGGTGGATGTTTCCTGCGATTACTCTTGTTTCGAAGTAAAGCCCTCTTACCTTTCAACTTTTTAATGGCCATCGTTTTGTACTGTTTTCTAGTATATAACTATATATTATCCTAATTTTAGTTAAATTGATTCATGTAAAGTTCAACGTTGTTTGCTTGCCTACATTTACGATTTTGATTAACCGAATATTCACCTACTCCATTAGTCACGCTATAATTCTTCTTACAAATCATAGGTATTTATTTGTTATAATTGTATCTCTCTGTATCCCGGTTTACTCTTTTCTTCATTATTTGTTTGCTTTCTTTTCTCTGGGTTTAGGGATACTCGATAGCTTCGGTTGTTATGAATTTGCTAACTTCTTAGGTTCAGAGGTTCAGTCTATCTGAAGGAGTTTGGTGGTATTTGAGCTTTTCTGGAACTTGATAACTATTGCAGGCGCTTTGTATCATCTATATACGAGCAGAAGCAATGGATATATCACAGGCTTCCTCTTTTTTCTCTTCTTCTAGGTGACAGCAGTGGCTAAGCCATTAATTCTGATAAGGGGATTCATAAAGAAGAAAAATACAAAATGGCATGCTGATTTGTACCTTTCTACTCTTATGTATAGGGAATTTGAGATCTTTTTTGAACAAGAAAACATAATTTTCACCTATTTGCTAGTTTAACTTCCTGACAATTGAATTCCTTTCGTAGTGTATGGCTCCGTCACTGGACTGGCGGAGAAAGGAGTTATGTTAATTAAGTGGCGAGAACTTATTCTGTAACATATACACTC</genome_strand>
        <mrna_strand>AATTTTCTCTGGTTACATTTTTGTTCCGCAGGCTCTGAGATCAGAAAATGGGAAGCGTTCCACTTCCCTCGTCGTCTCTACTAATTTCCAGCTCCAGTTCCTCCATTTTTGGAAGATCATCATCGACAATTTCCTATCCTCACCGGCGATTCAG................................................................................................AAAGGTGGATGTTTCCTGCGATTACTCTTGTTTCGAAGTAAAGCCCTCTTACCTTTCAACTTTTTAATGGCCATCGTTTTGTACTGTTTTCTAGTATATAACTATATATTATCCTAATTTTAGTTAAATTGATTCATGTAAAGTTCAACGTTGTTTGCTTGCCTACATTTACGATTTTGATTAACCGAATATTCACCTACTCCATTAGTCACGCTATAATTCTTCTTACAAATCATAGGTATTTATTTGTTATAATTGTATCTCTCTGTATCCCGGTTTACTCTTTTCTTCATTATTTGTTTGCTTTCTTTTCTCTGGGTTTAGGGATACTCGATAGCTTCGGTTGTTATGAATTTGCTAACTTCTTAGGTTCAGAGGTTCAGTCTATCTGAAGGAGTTTGGTGGTATTTGAGCTTTTCTGGAACTTGATAACTATTGCAGGCGCTTTGTATCATCTATATACGAGCAGAAGCAATGGATATATCACAGGCTTCCTCTTTTTTCTCTTCTTCTAGGTGACAGCAGTGGCTAAGCCATTAATTCTGATAAGGGGATTCATAAAGAAGAAAAATACAAAATGGCATGCTGATTTGTACCTTTCTACTCTTATGTATAGGGAATTTGAGATCTTTTTTGAACAAGAAAACATAATTTTCACCTATTTGCTAGTTTAACTTCCTGACAATTGAATTCCTTTCGTAGTGTATGGCTCCGTCACTGGACTGGCGGAGAAAGGAGTTATGTTAATTAAGTGGCGAGAACTTATTCTGTAACATATACACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U574599" ref_strand="+" ref_description="SGN-U574599 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>ggttgctatgactgcacaagcattttacttttgttatatttgatgaacaacccttttcctctgcatggttattgaagtcttgattccatcttccatattctgtaatctgagtagtctgttcttacaaaagtcctaacttgttatcttatgacagagacaccaagattgtcaactctataggctgagctgttaataatgacaaacaagtaagaataggacgagtagttagctttggtaatataaagaatagagtcacaggttatgctacctgcttttactttatgaagaatatgctgaaatatgtaaatctttctgccgtagaatattaatattctatgttaggttgcaaattctccagaactaaaggtaaccagggtgggatctctatatctattttagaggaactcttctttggcttcacttaaaagcaatttttatttattcttcttgtagaagctcagagttccttgtagggctatcagatcttattcaccaaatatacatcgatgtacacattgttgtgttagaacactctttctgctaactgtgtactagctctcatatttgcttttgctgatattttacaagggctattttgaaatcttttatatagttaattctttgctatggttggtacaagtgaagttcaagagcttgccaattagatcatacctctctttggattgcatgttgtataatggtagtgaggcttggttgtattgagcagcaggactgttttatggagtggagctattcccacaaagattttgaaagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="54932" stop="56313"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55230" g_stop="56013" g_length="784"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="776" r_length="776" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-U574599" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>784</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U574599" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55230" e_stop="56013"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGCTATGCCTGCACAAGCATTTTACTTTTGTTATATTTGATGAACAACCCTTTTTCTCACCATGGTTATTGAAGTCTTGATTCCATCTTCCATATTCTGTAATCTGAGTAGTCTGTTCTTACAAAAGTCCTAACATGTTATCTTATGACAGAGACACCAAGATTGTCAACTCTTAGTAAACCCTATAGGCTGAGCTGCTAATAATGACAAACAAGTAAGAATAGGACGAGTAGTTAGCTTTGGTAATATAAAGAATAGAGTCAGAGGTTATGCTACCTGCTTTTACTTTATGAAGAATATGCTG--A-ATGTAAATCTTTCTGCCATAGAATATTAATATTCTATGTTAGGTTGCAAATTCTCCAGAACTAAAGGTAACCAGGGTGGGATCTCTATATCTATTTTAGAGGAACTCTTCTTTGGCTTCACTTAAAAGCAATTTTTTTTGCTTCTTCTTGTAGAAGCTCAGAGTTCCTTGTAGGGCTATCAGATCTTATTCACCAAATATACATCGATGTACACATTGTTGTGTTAGAACACTCTTTCTGCTATCTGTGTACTAGCTCTCATATTTGCTTTTGCTGATATTTTACAAGGGCTATTTTGAAATTTTTTATATAGTTAATTCTTTACTATGGTTGGTACAAGTGAAGTTCAAGAGCTTGCCAATTAGATCATACCTCTCTTTGGATTGCATGTAGTATAATGGTAGTGAGTCTTGGTTGTATTAAGCAGCAGGACTGTTTTATGGAGTGAAGCTATTCCCACAAAGATTTTGAAAGCT</genome_strand>
        <mrna_strand>GGTTGCTATGACTGCACAAGCATTTTACTTTTGTTATATTTGATGAACAACCCTTTTCCTCTGCATGGTTATTGAAGTCTTGATTCCATCTTCCATATTCTGTAATCTGAGTAGTCTGTTCTTACAAAAGTCCTAACTTGTTATCTTATGACAGAGACACCAAGATTGTCAA--C----T-----CTATAGGCTGAGCTGTTAATAATGACAAACAAGTAAGAATAGGACGAGTAGTTAGCTTTGGTAATATAAAGAATAGAGTCACAGGTTATGCTACCTGCTTTTACTTTATGAAGAATATGCTGAAATATGTAAATCTTTCTGCCGTAGAATATTAATATTCTATGTTAGGTTGCAAATTCTCCAGAACTAAAGGTAACCAGGGTGGGATCTCTATATCTATTTTAGAGGAACTCTTCTTTGGCTTCACTTAAAAGCAATTTTTATTTATTCTTCTTGTAGAAGCTCAGAGTTCCTTGTAGGGCTATCAGATCTTATTCACCAAATATACATCGATGTACACATTGTTGTGTTAGAACACTCTTTCTGCTAACTGTGTACTAGCTCTCATATTTGCTTTTGCTGATATTTTACAAGGGCTATTTTGAAATCTTTTATATAGTTAATTCTTTGCTATGGTTGGTACAAGTGAAGTTCAAGAGCTTGCCAATTAGATCATACCTCTCTTTGGATTGCATGTTGTATAATGGTAGTGAGGCTTGGTTGTATTGAGCAGCAGGACTGTTTTATGGAGTGGAGCTATTCCCACAAAGATTTTGAAAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U583702" ref_strand="+" ref_description="SGN-U583702 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|15226155|ref|NP_180929.1| (e_value=2e-128) DEAD box RNA helicase, putative [Arabidopsis thaliana]; (*ATH) AT2G33730.1 (e_value=1e-130)  Symbol: None | DEAD box RNA helicase, putative, similar to SP:P23394 Pre-mRNA splicing factor RNA helicase PRP28 {Saccharomyces cerevisiae}; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain | chr2... ; (*SWP) sp|P93008|RH21_ARATH (e_value=1e-129) DEAD-box ATP-dependent RNA helicase 21 OS=Arabidopsis thaliana GN=RH21; ">
      <seq>gctcaacaaattgaggatgagactgtcaagttcgcacactatttgggtatcaaagttgtttctattgttggtgggcagtccatagaggagcaaggttttaggattaggcaaggttgtgaagttgtgattgcaacccctgggcgacttcttgattgcttggagagacgttattgtgttctgaaccagtgtaattatgttgttcttgatgaagcggaccgtatgattgacatgggttttgagcctcaagttgttggtgtactggatgctatgccttcaagtaatatgaaaccggagaatgaggatgaagagcttgatgagaagagaatttatcgaaccacttatatgttcagtgctaccatgccacctgctgtggagcggctggctagaaaatacttgagaaatcctgttgttgtgactattggcactgctggaaagactactgacctcatcactcagcacgtgtttatggtaaaggaatcagagaaaatgtataaactgcagaaattgctggatgagcttggagataagacagctattgtgttcatcaacactaagaagcaggctgattttgttgccaagaatctggataaaaacggctacagggtaaccacactgcatggtggaaagtctcaggagcaaagagaaatcagccttgaaggatttaggaccaagaagtacaatgtgttagttgctactgacgttgctggtcgtggtattgatacctgatgtggcccatgtgataaactttgatatgccaaacaatattgaagcatacacccatcgtattggacgtacaggtcgtgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="61178" stop="62584"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61478" g_stop="62284" g_length="807"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="805" r_length="805" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-U583702" ref_strand="+">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>807</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U583702" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61478" e_stop="62284"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTCAACAAATTGAGGATGAGACCGTCAAGTTTGCACACTATTTGGGTATCAAAGTTGTTTCTATTGTTGGTGGGCAGTCCATAGAAGAGCAAGGTTTTAGGATTAGGCAAGGCTGTGAAGTTGTGATTGCGACCCCTGGGCGACTTCTCGATTGCTTGGAGAGACGTTATTGTGTTCTGAACCAGTGTAATTATGTTGTTCTCGATGAGGCTGACCGGATGATTGATATGGGTTTTGGACCTCAAGTTGTTGGTGTACTGGATGCAATGCCTTCAAGTAATATGAAACCAAAGAACGAGGATGAAAAGCTTGATGAGAATAAGATTTATCGAACCACTTATATGTTCAGTGCTACCATGCCACCTGCCGTAGAGCGGCTGGCTAGAAATTACTTAAGAAATCCTGCTGTCGTGACTATTGGCACTGCTGGAAAGGTTACTGACCTCATTACTCAGCATGTCTTCATGGTAAAGGAATCTGAGAAAATGTTTAAGTTGCAGAGGTTTCTGGATGAGCTTGGAGATAAGACTGCTATTGTGTTCATCAACTCTAGAAAGCGGGTTAACACTGTTGCCAAGCATCTGGATAAAGCTGGCTATAGGGTAACCACACTGCATGGTGGGAAATCACAGGAGCAGAGGGAAATCAGCCTTGAAGGATTTAGGACAAAGAAGTATAATGTGTTAGTTGCTAGTGATGTTGCCGGTCGTGGAATTGATATACCTGATGTGGCCCATGTGATTAACTATGATATGACAAACAAACTTGAAGCATACACCCATCGTATTGGACGTACAGGTCGTGCA</genome_strand>
        <mrna_strand>GCTCAACAAATTGAGGATGAGACTGTCAAGTTCGCACACTATTTGGGTATCAAAGTTGTTTCTATTGTTGGTGGGCAGTCCATAGAGGAGCAAGGTTTTAGGATTAGGCAAGGTTGTGAAGTTGTGATTGCAACCCCTGGGCGACTTCTTGATTGCTTGGAGAGACGTTATTGTGTTCTGAACCAGTGTAATTATGTTGTTCTTGATGAAGCGGACCGTATGATTGACATGGGTTTTGAGCCTCAAGTTGTTGGTGTACTGGATGCTATGCCTTCAAGTAATATGAAACCGGAGAATGAGGATGAAGAGCTTGATGAGAAGAGAATTTATCGAACCACTTATATGTTCAGTGCTACCATGCCACCTGCTGTGGAGCGGCTGGCTAGAAAATACTTGAGAAATCCTGTTGTTGTGACTATTGGCACTGCTGGAAAGACTACTGACCTCATCACTCAGCACGTGTTTATGGTAAAGGAATCAGAGAAAATGTATAAACTGCAGAAATTGCTGGATGAGCTTGGAGATAAGACAGCTATTGTGTTCATCAACACTAAGAAGCAGGCTGATTTTGTTGCCAAGAATCTGGATAAAAACGGCTACAGGGTAACCACACTGCATGGTGGAAAGTCTCAGGAGCAAAGAGAAATCAGCCTTGAAGGATTTAGGACCAAGAAGTACAATGTGTTAGTTGCTACTGACGTTGCTGGTCGTGGTATTG--ATACCTGATGTGGCCCATGTGATAAACTTTGATATGCCAAACAATATTGAAGCATACACCCATCGTATTGGACGTACAGGTCGTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U576961" ref_strand="+" ref_description="SGN-U576961 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|157341137|emb|CAO49044.1| (e_value=3e-55) unnamed; (*ATH) AT3G27010.1 (e_value=2e-45) | Symbol: None | TCP family transcription factor, putative, similar to PCF2 ((GI:2580440) Oryza sativa) | chr3:9958619-9960135 REVERSE | Aliases: MOJ10.8; (*SWP) sp|Q9LSD5|TCP20_ARATH (e_value=2e-44) Transcription factor TCP20 OS=Arabidopsis thaliana GN=TCP20; ">
      <seq>cggcacgagggcctctttttatttatttattactataacctgcaaggtagacccatctagtttccattgatggatcccaaacaggctaaccacaacaatattaagcctactcatgatcagataaaagagttgcagattttgaaaaatgatgaaacgaacaaggtggctgctcccaaaagaaaagataggcatacaaaagttgaaggtagagggaggagaatacgtatgccggcgctctgtgcagcaagaatcttccagcttacgcgcgaattgggtcataaatctgatggtgagacaattcagtggctgctgcagcaagccgagccttcgattattgctgctactggcacagggacaatacctgcctcggctttagctgcagcagcctctgtttctcaacaggggatctctgtatcagctggtttaatgattgaatcgggggcgaatatcgcggggtctggtagcagtagaagtagtaatagtaggaccaattggccaatgatctgtgggaattttggaagaccccatttggctacagcaggaatgtggcctgcccctgcccctgttgtcactagttttgggtttcaatcctcatctgctccatcaagcgcgagtttaggtagtgatagttcaaattattacttacagaaaattgggtttcctggatttgatctgcctgcagctacaagtatgaatccgatgtgttttacttcaattcttggtggaagtaatcagcaactgccaggattggaactgggattatctcaagagggtcatttaggggttttgaaccagatataccagcaggcaagaatgcaacatccgcagcagcaacatcaacaacaacaacaatctccggaggaggattctcaaggatcangacatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="69118" stop="70596"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69410" g_stop="70296" g_length="887"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="886" r_length="886" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-U576961" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>887</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U576961" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69410" e_stop="70296"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAACAAAGAGCCTCTTTTTATTTATTTATTACTATAACCTGCAAGGTAGACCCATCTAGTTTCCATTGATGGATCCCAAACAGGCTAACCACAACAATATTAAGCCTACTCATGATCAGATAAAAGAGTTGCAGATTTTGAAAAATGATGAAACGAACAAGGTGGCTGCTCCCAAAAGAAAAGATAGGCATACAAAAGTTGAAGGTAGAGGGAGGAGAATACGTATGCCGGCGCTCTGTGCAGCAAGAATCTTCCAGCTTACGCGCGAATTGGGTCATAAATCTGATGGTGAGACAATTCAGTGGCTGCTGCAGCAAGCCGAGCCTTCGATTATTGCTGCTACTGGCACAGGGACAATACCTGCCTCGGCTTTAGCTGCAGCAGCCTCTGTTTCTCAACAGGGGATCTCTGTATCAGCTGGTTTAATGATTGAATCGGGGGCGAATATCGCGGGGTCTGGTAGCAGTAGAAGTAGTAATAGTAGGACCAATTGGCCAATGATCTGTGGGAATTTTGGAAGACCCCATTTGGCTACAGCAGGAATGTGGCCTGCCCCTGCCCCTGTTGTCACTAGTTTTGGGTTTCAATCCTCATCTGCTCCATCAAGCGCGAGTTTAGGTAGTGATAGTTCAAATTATTACTTACAGAAAATTGGGTTTCCTGGATTTGATCTGCCTGCAGCTACAAGTATGAATCCGATGTGTTTTACTTCAATTCTTGGTGGAAGTAATCAGCAACTGCCAGGATTGGAACTGGGATTATCTCAAGAGGGTCATTTAGGGGTTTTGAACCAGATATACCAGCAGGCAAGAATGCAACATCCGCAGCAGCAACATCAACAACAACAACAATCTCCGGAGGAGGATTCTCAAGGATCAGGACATT</genome_strand>
        <mrna_strand>CGGCAC-GAGGGCCTCTTTTTATTTATTTATTACTATAACCTGCAAGGTAGACCCATCTAGTTTCCATTGATGGATCCCAAACAGGCTAACCACAACAATATTAAGCCTACTCATGATCAGATAAAAGAGTTGCAGATTTTGAAAAATGATGAAACGAACAAGGTGGCTGCTCCCAAAAGAAAAGATAGGCATACAAAAGTTGAAGGTAGAGGGAGGAGAATACGTATGCCGGCGCTCTGTGCAGCAAGAATCTTCCAGCTTACGCGCGAATTGGGTCATAAATCTGATGGTGAGACAATTCAGTGGCTGCTGCAGCAAGCCGAGCCTTCGATTATTGCTGCTACTGGCACAGGGACAATACCTGCCTCGGCTTTAGCTGCAGCAGCCTCTGTTTCTCAACAGGGGATCTCTGTATCAGCTGGTTTAATGATTGAATCGGGGGCGAATATCGCGGGGTCTGGTAGCAGTAGAAGTAGTAATAGTAGGACCAATTGGCCAATGATCTGTGGGAATTTTGGAAGACCCCATTTGGCTACAGCAGGAATGTGGCCTGCCCCTGCCCCTGTTGTCACTAGTTTTGGGTTTCAATCCTCATCTGCTCCATCAAGCGCGAGTTTAGGTAGTGATAGTTCAAATTATTACTTACAGAAAATTGGGTTTCCTGGATTTGATCTGCCTGCAGCTACAAGTATGAATCCGATGTGTTTTACTTCAATTCTTGGTGGAAGTAATCAGCAACTGCCAGGATTGGAACTGGGATTATCTCAAGAGGGTCATTTAGGGGTTTTGAACCAGATATACCAGCAGGCAAGAATGCAACATCCGCAGCAGCAACATCAACAACAACAACAATCTCCGGAGGAGGATTCTCAAGGATCANGACATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U574691" ref_strand="+" ref_description="SGN-U574691 Tomato 200607#2 [15 ESTs aligned] (*GB) gi|217075154|gb|ACJ85937.1| (e_value=1e-46) unknown; (*ATH) AT3G26980.1 (e_value=3e-45) | Symbol: None | ubiquitin family protein, contains INTERPRO:IPR000626 ubiquitin domain | chr3:9947403-9949277 REVERSE | Aliases: MOJ10.7; (*SWP) sp|Q9LSD8|MUB4_ARATH (e_value=3e-44) Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana GN=MUB4; ">
      <seq>gggcgattggcggccaatcggccgaattgagttgtgtctagggttcccccattttagctgtgcgattcaatgcaatcaagcagaagaatccttgctctttaatacactggtttcggaggtgaaaaaactgagaagaaagaggttggtgggcgatcacaaatgccggaggaagatttgactgaagttaagtttcgtttgttcgatggatcagatgtgggtccatttcagttctccccggcttcaaccgtagctatgctgaaagagagaattgttgctgagtggcctaaagataagaaaattgcacctaaggcggcaaatgatgtcaagttgataagtgctgggaaaattttggagaacaacaagactgttggtcaatgtaaaacacctttcggtgaactacctaatggtgtgattaccatgcatgctgttgtacagccatcagtaggtaaatcaaaatcagaaaagaagattgacgagactccgaagaaaagtgtgtgcgcgtgtaccataatgtgagattgtaagtgattcaagtttaatcctgtggtattcttgggggataaactgctgctgtgaagttcagggaaaacagtatgatagctcattgttacttgtttgttcgttgaacggctattcaatgtaacagcgtgtctatttgtttgaatgaatttggtaggtgtacattttgtaattgcagatttcttatacagaaatacagaaagtgtgctggattgcatgctataggattttaccgagctcttgttattctattctgggtccttattattcaacttagatcgtgatgatccgtatactctaatctttgacgtctaaaaaatcaagaagtatgctggattcgaaattgttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="81509" stop="72621"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81210" g_stop="81119" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="109" r_length="92" r_score="0.935"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81118" i_stop="81027" i_length="92">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81026" g_stop="80847" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="289" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80846" i_stop="78868" i_length="1979">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78867" g_stop="78697" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="460" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78696" i_stop="73330" i_length="5367">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73329" g_stop="72921" g_length="409"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="869" r_length="409" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-U574691" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>852</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U574691" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81210" e_stop="81119"/>
          <exon e_start="81026" e_stop="80847"/>
          <exon e_start="78867" e_stop="78697"/>
          <exon e_start="73329" e_stop="72921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGTGGAGTTCAGTTGTGTCTAGGGTTCCCCCATTTTAGCTGTGCGATTCAATGCAATCAAGCAGAAGAATCCTTGCTCTTTAATACACTGGTAAACTTGTTTATTCACGTTGCTTATATATATATATTTGCTTCTCATCTCGCTTTTTTCTGACTGTTAAGCTGTTTGTCTCTGCGATTTAGGTTTCGGAGGTGAAAAAACTGAGAAGAAAGAGGTTGGTGGGCGATCACAAATGCCGGAGGAAGATTTGACTGAAGTTAAGTTTCGTTTGTTCGATGGATCAGATGTGGGTCCATTTCAGTTCTCCCCGGCTTCAACCGTAGCTATGCTGAAAGAGAGAATTGTTGCTGAGTGGCCTAAAGGTTAGTAAAATTACGTCATTTTTGTTAGTTTTTGGAGGCTTGCGTTGCATAATTGAGATGTTTTTGGTTGAGTTCTGTTAATTGTTTATGGAAATGGGGAAACAGGGTTTGATGAGAATACCCATAAATTTAATGACACTTAGCACCCTAAGAAACAGTATTCAGTACCTCATCAGCCTCCAACCCAAATAAATGTTTGAAAGAAATGTTTTTTGTTTGCATTTTTGGGGCTTTTAGTTGGGGTTTTGGTGATCAAGGGATGGATCTTTTAATCTGAGATTTTGATTGATAAGGCTAAAATGAAAATGGACTAAAGTTCACATCAAATAGCTAAAGAGATTTTTGTCATGTTAACTTTCGATACCAAACACACTTGTATGCAAAATGATGAGCAGAATACCTAGCTAGGCCAAATCCCTGTGGCACTCCTATCCAACACGGTAATCCTTAATACACTGAACCTTTTGAAAGAGTCTAACAAGCAACACCACTTTCGCAACGTGCACAAAATAGGTGTGTTGTGCCTGTGTGAATTTTGTCCCAGCCCATATTTGATATTCCTATCCCCATAGAACCCCTCCTCCCCTTTCTCCCACACAGGAGATACAAAATTTCAGATACGAAAATTGAGTGCTTGTTGTTCAAATCTTGTGGAATCGGTTATATTGTGAGACTTACAAGCTTTAAGACTGATTTTTGTGAAGGTTGGGTGGAAAAATTAAGGAATCTACCATTGTTGGGCATTTTTTTAGATGAAGTAATAGATTTCACCTTCCATTGTTGGGCATTGAGAAAACTTGAAAATACAACTGGGTCTTGTTGACTTTTGAGTTGTGCTCAATTCATTTGGGGTTTAATTAAATAGTTTTTTATGGAAACTTTCTCATGGACAACCATGGTGGTGGCAGCCATGATCAATTAAATGTTAATGACATGTGTCACGACCATATTAGGGCCTGACATACACATCGTTTTGATAACTGGCCAAGCACAGAAGTGGTGTGTAAAAGATACTTTGAAAAGATTGGCTGTGTAAAAGGTTATTCGTATTGGCCAAAGGTCTCTGATTGTTCTCCATACCTCAACCCCATAGTTAGCTAACATCTTTAACTGCTTCTACATCTAATTCAGAAATCTAAAATGATTTTTGAATTAACACTAAGTGATGCAGTAGAACAGATGATATCTGGGTCTGAATCCTGAGAATGGAGAAATCTCTTTTAGGGAATGCCTAATCTCAATGAACTTTTGTGGCGTGAATTTGGATTAATTGGACAAGTGGATTCTAAGTACCTCATGTTTAACAAAAAAATTATTTTTGTGTTTGATTGACATGATTTTTACTTTATATATTTCGTTTAATTTTACGTTGTTTAGTTTGTTTGTCCAGTTAATCATTTTCTTTGTTTAATAGTTATTTTTTCTTACATTAGGTAGTTGTATTGTGCATGCGCACACACGTATAGAGATAGGTGGGACTTGTGAGGTTGTGAGCAACAAGTTTCAAAGAACTTATAATTTGCCTTGTTAGACAAATTATATAGTGTTGTAATTAATTGGTCTAATATGGAGATTGATAAAGAGGATTTTAGCCAATTTCAATTAACTTAGAGTTTGAAGCACAACTTTTTGATAATTTAACTTTTGTTAAAGAGCTTTAGTTCAGTATTTTTAAGTCAACCAAATTGTACCAAAATCCAAGCCCAATTCATACTGGACGAATGAACATAATCAAATCAGTATAAGAATTTTGTTTGAGGAGTATTGGTTATGAGCTGCAATTGGCTATCCCTATTTTTCTTTATGCCATCCAGAAAAGTCTATTGATATCTAAATCCTTTAAAGCCTTTAATGTTTGACAGATCTTCATTTTATTAACTTACTATAAACTATATATTCAGGAAATTGGGAAAGGGTTATTATTTATTTCTATGTGGCCTCTAATTTCCTGAGATTAAGTTGTGATGCTCTCTTGGCAGATAAGAAAATTGCACCTAAGGCGGCAAATGATGTCAAGTTGATAAGTGCTGGGAAAATTTTGGAGAACAACAAGACTGTTGGTCAATGTAAAACACCTTTCGGTGAACTACCTAATGGTGTGATTACCATGCATGCTGTTGTACAGCCATCAGTAGGTAAATCAAAATCAGGTGGGTTCCTCTTACTTGATTTGTGGTAATAGACACTGGTTTTACCCTTTCTGTAATGTATTTATATTTTTTGAGGCTATTGGTGATTCTGTTACTGTGTGTTCAGGAAAAAATAAGGACAAGAATCTTCTTCATCTTCTTAATATCTTAATTGTCATGCAATATAGTTAACTGGTTGGTTGTATGTACCTTATTTTTAACATGGTAATGCTTTTAATGTCTATGCCTCTATGGTTCTTTACATTTTGCCTTACAAAGAAATTTATGTGGTATGTGTTAAAATTCCAGATGATTGCAAGGGCTCGTGCCCAGGGACCATTTTCAGATGTATGTTGTATTAATTGCAGTGGTTCATATGGTATACTGAATATTTTAGCTTATGTAACAGAAAGTATGAAGTTAGAATCGTGTTTCAACCCCGTCATATGCAAGATAGTATTAACTCTTCAAGTGATGGAGACTCAGTTTCTGTATTTTCATGTCTTAGCTTGCATGTCAGGTCTTCATTTTAGAAGAGATCAAAAGGGTTACTATAAATTCAAGTGTCTATCATAAACTGTAACAATAAAAAAGGAGTGCTGCAGGTTGCATTACCTTAAGTTCTAGTTGATAACCTAAACCTAGCTTATGTCTTAAAGTATAGGGTTTTATCTGATTCATAATCCACATATGAAGAGTTGCTCCAAACAAATTACTAAACATATTTAAGTTAAACGTAACTAGGTTGATCTACCACTGAATATCAACTATGATTACTTATCCTGACACCATCGTAATTAATATGAGCTTTCAATTAAGAACATACTTAATCAAATCTGATTTCACCTAATTTAGTGAGGATTGCATTTAAAAAATGTTACTCTGTCTATATTAGTGTCGAAGTGCGGAATTTAAGAAAACAACCTTTGAATCTTGTAATCATAAACTAAGGATATTCGTAATGTGCCAAATTGCCCATTGAATCCCGTGGTTTTAGACAAGCGAAGTAGAGTTTTGGAATTAGAGAGTCACCTACTTTAAAAAGAGACTTTCTTTTTGAAATAGACTAAAAAGGGAAGTAAGGTACTTGAGTTGAAACGGGGGAAGTATTCTTTTATATATACCATGTTGCATCTTGTAGATACACCACAAATGAAAATTATTGTGATTATGCCGATGGTCAAGAAAGTTAACTTGTGATGATGTGTATAGAACAATAAGAACAACAAAATTAGAGTTGATATTCCCCAAAAAGATGAAGAATTATATTGTGTTTAGTATATAATATATGGATTCATCTACTATATATAGTATATATGGGCCAGGAGACGTGTCGTATACAACATTACACACTATGTAGGTGATTAGGTCATCTGTGCAAAGCATGCCCTGATTTGGTTATAATAGTTGGGATCACATTCCTTCCATATTAGTTTCATATTCATGAGCCTTCAAGAATAGAAATATTTTTATGTAGATTGAGATGAGTAGTTTTTTTTGCTATTGGGTTTAGTCAATGATTTGCTTAGTATAAGCTCATTTCTTTGGAGACCCAGTGTTTTTAGAAACAAAAAGTGCAAAAACGAGGTCTATTGGCTTGAGGCAAAAAGTGATAAGTGAAGGGCACACTTCTTTGGAATGAAGTGCATAATTTGAGAAATTTAGATAATAATCTATGACCCAGATGTTGCAAAAAGCTTGCAACTCATAGGTTGTTCGTGAACAATATTACCTCAAAAGCTCCAAATGACATGTTAAGGACTTAACATTTTACAACATTACCAGTTTTAAAAAAAGGTCTTCCATCGTAGGTATTCAAGATCCACTTTTCCCAAATTATGTATCAGTTTTTATTTTGGCACTCCCATAAATGTTTGTCATCCTCAAGATAAAAGTTAGTTGTATACCTTTGTTTTTATTCATGGTGTTAGTTGGAACATGTAAATGATGCTGAATCAGTTCTGCAGATGTTAGAAACCTTCGACCTTCAGGGTTAGATGGGATATATTCTCATTTGATTTTAACAGTGTACATATGTACATCACGTCCTCTGTGCTAAGTTTATTTCTAAAAGTTACTTCACTTTCTCCCAAACAAAAAACTCTCTTAAACGTTGGTTACACTTTTATAAACAATAATATTCGACATGCTTAATTTATAAAAACACACTACTTCTAAACACTCCTCATGTTGGTGATGTATCGTAGACTCATTAATTATCTTAAATACAATCATTAGACATTCTAATTATCAAACTCACTTTTGAATCATGATTTTGATGTTTTTCCTCTTAAATACATAGGTTAAATGAATTTGTTAAATTCTAAGCCTAGTCTTGACATGAAATGGGGCATACAATGGGATAGGGTGAGTGAGTACTAATGTGTTAATTCATGTCTGGCGATGTTAACTATTCTATTTTGGGACAAGCAACTGTTCCAGTCTAGTATCAATGTTTTATCCAATTTTTATGAAGATGTTTCGCCTGGGAAATCTCTGAATATTCTTTTCTTGCTTTAGTTCCAAGTTGTTGGCTGGTTTATAACAATTCCAAGTTTAGAATGTCTTGTCAGAATTACCTTTTGTGGGTTGAGCTTTGTAAATTTAGGTTTAACAAATCGGGAAAATATTATTAATTTTTTAATCTTCTTATTTAGTGATCGATACTCATATTGAAATTTAACTAATCTGAGTGTCTAATTTGGAAAAAGGGGCTAGAGGTGGAACATTTGATTTTTCAACTGCTAGGATTAAACCTTTTGGATTCTTGAATAGAGTCAATTGTTGTTGGAGAGATTTGAAGTTACAGTATTCTTATGTGAATAGATTCTAAGAGCTTTTTGTGTACTACTTTATCCTCTATTCTTTTGTGACAGCATCCCTATTATTTTATAAGAGCTGGTGTGAACTCAAGTTTATAAGATATTTCAACCAATATGTATTACATTAGTAGGAGCTGTCACCCTCCAACATCCGTCGCTTCTACTTACATATCTGATTCTGGAAGGCATGTATCTGGAAAATGTTTTTCCTTTTCCTCTTTATTGTACTTTGTACTAATTTACGTAATAGTAAACAAAAGTATTTTCTTCAAATGAATTTGAGACTGGGAGTGTTAATGTGAAGTTGCCCACATGAATTGTTAAAGATGAGAATACATCAATGAACTTGAAATTTACAAAATAAATGAAATGTTCTTTTGGTATATAAAGGATTTTATTACCAAAAGAGAATCTGTACAACACCTTGACATGATAATTTAGAATTGGACAACAAGTTCCAACTTCTAGAGTGACCTAATGCTCCTACTTTATTTTAATATTATCAAAATAGGAGCAGATGTGATATTTATTCAAGAAACAAAAATGGAAACTTTGACGAATAGAACTATTAGAAGTGTGTGTGTGTGTTGGGGCGGGGAGGGAGTAAGATTACTTTCTGGCACAGGACAGTGCAGGACAAATACTTATTCTTTGGGATGATAGGAAGGCGAGAGAACAGAAAGGAGGAGTATGTTGAGCTTAATAAGGGGGAGTTCATGTTAAGGGTGCAGTTTAGTTTTAAAATAGGGTGGAATGCAGTTTTCTTTGGAGAAGTTAGGGAATTGTATGGAAAAGAGGTGGGAGATCCCTTGGGTGTTAAAAAGGGATTTTTAACACTACAAGGGATCTTAGGAAGGGATTTTTAACACTATAAGATTCGCGGAGGAGAGGTTGGGTTACAGGCGATTTCCAGGGAAATGGAGGAATTCTTGCAGTTTTTAACCACCTTCTTATAGATTTACCTTTGATAGGTGCCAATTTCAACCAAGCATTATTCAATTCCCTCTCTTGTGGAGATCATTCACCTATTATGTTGGATGGTGTAGGGGTAGAAGGATGAGATCACTTTTCAAATTCGAGAACATGTGGCTGTGAGAGACAGACTTTGTAGATAGAGTAGCCGGGGCATAGAGGAGAGACCATCTTTCAGACTTGTAAAAAAGTAAAGATGCTTAAGAAAGACTTAAGATGTGGAATCAGAGGTAGTGTTTGGGAGGGTAGAGGTGAAAATGAGGGAGATTATGAATGAGGTGGGGGAATTAGAAAGAATACAGGTGGGAAGGAAGTTGGACAAAAGGGAAATGGAGAAAAAATAAATTTTAAAAATGGAATTAGCTTTAAGAGACTAGTTGGAGACAAAAATTGAGCTCGTTGGGGTCCGAGTATTGGTATTCTAACACAAGTTCTTTTGCAGGGTAATAGTTGCAAATAGGAGGAGAAATTTAATAGAGTGAGTAGAGTTGGGGGGAGATACATACATGTGGGAGAGGAAGAAGTAGGAAGAGCAGTTGTTCAATTCTATGAACAATTGTTCAAAGAGGAAGAAGAATGGAGGCCAATTAGATAGGAGTGGATAATAGTGAGCGGTAAGAGAGAAAAATTGACATAAGGGAGGTGCGTGAGGCAGTGGGGTGTTGTGCGGGCGACAAGGCTCGAGGTCTAGATGGTTTAACTTTTGTTTTCTTTCAGCATTGTTATACAGTCAGACATGATGAATTAAGTACTATTGACGAGTTTTAGGAGGGGTAGTTTCGGAAGGAGCTTAAATGCTTCTTTGATTGTAATTTTTACAAAGGAGGAAGAGACTTCTAGAATTGGGGACTACAAACCAATTGGTCTAGTTGGAAGCATCTACAAGATCATTTCTAAGGTGCTTTCTGATAGACTTAAAGAGAGTTTTTGCACGAGACTGTTTCGTTTTTGCAAAATGCTTTTGTTGATGGAAGGCAGATTTTGAATGCAGCTTTGGTGGATAATTAAGTGGTAGATTCGAGGGAGAAACAAGGTGAGTCGGGTGTTTTGTGCAAGTTAAATTTTGCTGAGTTCAATCAAGATCTAACTGTGCTAGTGGATTTTGACCTGTTGAAGTGCTCTTGCTTATATGTGGCAAGGTGCTTAACTAAATCTTATCCCAGTGAGATTTTTGTAATTGGAGATTCTCTTGAGTTAGTTATTTCATGAATCCTCCACTAATGTTTGGCGGATGTCTATTTTCGTCTAATGCTGAAGTTGTAGTATCCAGGAAATACTTGTCTCGTGTAAATGTGAGCTTCATTAAATTTTACTGAAATAAGACTTTACCTTCTAAGCTTGACATGAACCCTCTATTTGTTCTAATGCTGAATTGAGGATAAGATACACGGTAGAAGACCCGCCTTGCCACACCCTTAACCTCTAACCCTGTGCTTTTCTTGTAAAATTTATTTATTTATGTATAGAAGTTCAATTCCGTGCCTGTTTTCTATCCTTAACAAGTATCTTCATTCCAGGGTGTGGTGTTAATAATTCATAGTGTACACTTTTTTTTTTTTCCTTTTGGCTGCTGAAACTTGTCTTTATATGACAGAAAAGAAGATTGACGAGACTCCGAAGAAAAGTGTGTGCGCGTGTACCATAATGTGAGATTGTAAGTGATTCAAGTTTAATCCTGTGGTATTCTTGGGGGATAAACTGCTGCTGTGAAGTTCAGGGAAAACAGTATGATAGCTCATTGTTACTTGTTTGTTCGTTGAACGGCTATTCAATGTAACAGCGTGTCTATTTGTTTGAATGAATTTGGTAGGTGTACATTTTGTAATTGCAGATTTCTTATACAGAAATACAGAAAGTGTGCTGGATTGCATGCTATAGGATTTTACCGAGCTCTTGTTATTCTATTCTGGGTCCTTATTATTCAACTTAGATCGTGATGATCCGTATACTCTAATCTTTGACGTCTAAAAAATCAAGAAGTATGCTGGATTCGAAATTGTTAG</genome_strand>
        <mrna_strand>TCGGCCGAATTGAGTTGTGTCTAGGGTTCCCCCATTTTAGCTGTGCGATTCAATGCAATCAAGCAGAAGAATCCTTGCTCTTTAATACACTG............................................................................................GTTTCGGAGGTGAAAAAACTGAGAAGAAAGAGGTTGGTGGGCGATCACAAATGCCGGAGGAAGATTTGACTGAAGTTAAGTTTCGTTTGTTCGATGGATCAGATGTGGGTCCATTTCAGTTCTCCCCGGCTTCAACCGTAGCTATGCTGAAAGAGAGAATTGTTGCTGAGTGGCCTAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGAAAATTGCACCTAAGGCGGCAAATGATGTCAAGTTGATAAGTGCTGGGAAAATTTTGGAGAACAACAAGACTGTTGGTCAATGTAAAACACCTTTCGGTGAACTACCTAATGGTGTGATTACCATGCATGCTGTTGTACAGCCATCAGTAGGTAAATCAAAATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAAGATTGACGAGACTCCGAAGAAAAGTGTGTGCGCGTGTACCATAATGTGAGATTGTAAGTGATTCAAGTTTAATCCTGTGGTATTCTTGGGGGATAAACTGCTGCTGTGAAGTTCAGGGAAAACAGTATGATAGCTCATTGTTACTTGTTTGTTCGTTGAACGGCTATTCAATGTAACAGCGTGTCTATTTGTTTGAATGAATTTGGTAGGTGTACATTTTGTAATTGCAGATTTCTTATACAGAAATACAGAAAGTGTGCTGGATTGCATGCTATAGGATTTTACCGAGCTCTTGTTATTCTATTCTGGGTCCTTATTATTCAACTTAGATCGTGATGATCCGTATACTCTAATCTTTGACGTCTAAAAAATCAAGAAGTATGCTGGATTCGAAATTGTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U603692" ref_strand="+" ref_description="SGN-U603692 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|217073014|gb|ACJ84867.1| (e_value=2e-18) unknown; (*ATH) AT3G51520.1 (e_value=1e-13) | Symbol: None | diacylglycerol acyltransferase family, contains Pfam PF03982: Diacylglycerol acyltransferase | chr3:19121628-19123739 FORWARD | Aliases: F26O13.160; ">
      <seq>ggtaccttttcgacgacccatgcatgttgtagttggtaggccaattatgctggagaaaaatccagagccaaccgttgaagaggtttctgaagtgcatagtcgatttactgaagcaatgcaagaactatttgaaaggcacaaaaagagggttggttatgaagatctaccactgagagttgtttaatgtttatatgataactctgcattaatatgtatctaaatcttctggttgtattactgcttttattcattatcttttcttgtttcctccatcttcttatgtgcatctaactctagtcatggaggagaaaagcagtatgaatagaaaaaaataaatgattatgaaatttgcagtcactaatatgcttggatatgaagagaaagacagtttgtatcttacaaattaatttatctacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="85823" stop="84608"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85523" g_stop="85442" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="82" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85441" i_stop="85243" i_length="199">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.939" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85242" g_stop="84908" g_length="335"/>
          <reference_exon_boundary r_type="cDNA" r_start="83" r_stop="417" r_length="335" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-U603692" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U603692" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85523" e_stop="85442"/>
          <exon e_start="85242" e_stop="84908"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTACCTTTTCGACGACCCATGCATGTTGTAGTTGGTAGGCCAATTATGCTGGAGAAAAATCCAGAGCCAACCGTTGAAGAGGTATGCCAGTTCACCCTGTTAGTCTGTCTCTTTCTTTGCTATTAGCACTGAGAAAATATTGTGGTATAGTCGTAAGGGGCTTGATTTGGTGCTTCAACACCAATATTTTCGATGCAGAGCATATATTATGTTAAAACTCAAAGATCTCAACAAATATTATGTCTGGACCCATAATTCACCTTAGATTTTTCTGTTGAAGGTTTCTGAAGTGCATAGTCGATTTACTGAAGCAATGCAAGAACTATTTGAAAGGCACAAAAAGAGGGTTGGTTATGAAGATCTACCACTGAGAGTTGTTTAATGTTTATATGATAACTCTGCATTAATATGTATCTAAATCTTCTGGTTGTATTACTGCTTTTATTCATTATCTTTTCTTGTTTCCTCCATCTTCTTATGTGCATCTAACTCTAGTCATGGAGGAGAAAAGCAGTATGAATAGAAAAAAATAAATGATTATGAAATTTGCAGTCACTAATATGCTTGGATATGAAGAGAAAGACAGTTTGTATCTTACAAATTAATTTATCTACC</genome_strand>
        <mrna_strand>GGTACCTTTTCGACGACCCATGCATGTTGTAGTTGGTAGGCCAATTATGCTGGAGAAAAATCCAGAGCCAACCGTTGAAGAG.......................................................................................................................................................................................................GTTTCTGAAGTGCATAGTCGATTTACTGAAGCAATGCAAGAACTATTTGAAAGGCACAAAAAGAGGGTTGGTTATGAAGATCTACCACTGAGAGTTGTTTAATGTTTATATGATAACTCTGCATTAATATGTATCTAAATCTTCTGGTTGTATTACTGCTTTTATTCATTATCTTTTCTTGTTTCCTCCATCTTCTTATGTGCATCTAACTCTAGTCATGGAGGAGAAAAGCAGTATGAATAGAAAAAAATAAATGATTATGAAATTTGCAGTCACTAATATGCTTGGATATGAAGAGAAAGACAGTTTGTATCTTACAAATTAATTTATCTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U585747" ref_strand="+" ref_description="SGN-U585747 Tomato 200607#2 [11 ESTs aligned] (*GB) gi|217073014|gb|ACJ84867.1| (e_value=8e-79) unknown; (*ATH) AT3G51520.1 (e_value=1e-76) | Symbol: None | diacylglycerol acyltransferase family, contains Pfam PF03982: Diacylglycerol acyltransferase | chr3:19121628-19123739 FORWARD | Aliases: F26O13.160; (*SWP) sp|Q96UY1|DGT2B_UMBRA (e_value=5e-17) Diacylglycerol O-acyltransferase 2B OS=Umbelopsis ramanniana GN=DGAT2B; ">
      <seq>cggcagagggactgcataattccctactttctttctataaatttataatcaattcagtaatttcatatttatttttttctgttttattcgtttcgatttggattttcacccatggctatacaagaggataattcaataattcatcaacagccggcgccgccgtcagctccgacgccggtggagtttaaaggggcaaattccgggtcattattgcatactgtattggcgttggtcttatggcttggctccgtccatttcaacttcttaatacttattgcttcctttatttttcttcctttctctaaaacagtcatagttataggaatattgcttatacttattctcattccgattgatgagaaaaataattttgggcgaagattagctaggtacatctgtaagcatgcttgtggctattttccggtccatttgtatgtagaggatatcaaagcatttgatcctaatgaggcttacgtttttgggtatgaaccacattctgtttggcctattggggcggttgcccttgctgatcttacaggtttcatgcctctcccaaaaatcaaagtgcttgcgagtactgctgtgttttatacacctttcttgcggcatatctggacatggttaggacttgcaccaataacaaggaaaaattttaaatccctcttggcatctggttacagctgcatcatagtgccaggtggagttcaagaaacattctatatggaacacggttcagagattgcttaccttcaaaaaagaaaaggatttgtacgaattgcaatagagacgggcaaaccactggttccagttttctgttttggtcagactgctatctataaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="90181" stop="86135"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89888" g_stop="89574" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="314" r_length="314" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89573" i_stop="89471" i_length="103">
            <donor d_prob="0.791" d_score="1.00"/>
            <acceptor a_prob="0.883" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89470" g_stop="89396" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="315" r_stop="389" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89395" i_stop="89296" i_length="100">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89295" g_stop="89210" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="390" r_stop="475" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89209" i_stop="87565" i_length="1645">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87564" g_stop="87458" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="582" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="87457" i_stop="87371" i_length="87">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.052" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="87370" g_stop="87215" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="583" r_stop="738" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="87214" i_stop="86799" i_length="416">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.369" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="86798" g_stop="86712" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="739" r_stop="825" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="86711" i_stop="86450" i_length="262">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="86449" g_stop="86435" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="826" r_stop="840" r_length="15" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-U585747" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>841</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U585747" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89888" e_stop="89574"/>
          <exon e_start="89470" e_stop="89396"/>
          <exon e_start="89295" e_stop="89210"/>
          <exon e_start="87564" e_stop="87458"/>
          <exon e_start="87370" e_stop="87215"/>
          <exon e_start="86798" e_stop="86712"/>
          <exon e_start="86449" e_stop="86435"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAGCTACTGCATAATTCCCTACTTTCTTTCTATAAATTTATAATCAATTCAGTAATTTCATATTTATTTTTTTCTGTTTTATTCGTTTCGATTTGGATTTTCACCCATGGCTATACAAGAGGATAATTCAATAATTCATCAACAGCCGGCGCCGCCGTCAGCTCCGACGCCGGTGGAGTTTAAAGGGGCAAATTCCGGGTCATTATTGCATACTGTATTGGCGTTGGTCTTATGGCTTGGCTCCGTCCATTTCAACTTCTTAATACTTATTGCTTCCTTTATTTTTCTTCCTTTCTCTAAAACAGTCATGTTAGTTTTCTCTTTACTTTCTCTCTACCTCTTATTTCCATCTGCCTAGTAGTTTGGATTTGAGTTTGAGTTTGACTTTAGTCTTGATAAAATTTTGTTTCAGAGTTATAGGAATATTGCTTATACTTATTCTCATTCCGATTGATGAGAAAAATAATTTTGGGCGAAGATTAGCTAGGTAAGTGATTTTTTGTTGGTGCAATTTAGTATTTATCTGATTAAGTGGAAACTATTGATTTTCTGCTGTATTATTGATGCTGAAAATTGGGGTTCTTCAGGTACATCTGTAAGCATGCTTGTGGCTATTTTCCGGTCCATTTGTATGTAGAGGATATCAAAGCATTTGATCCTAATGAGGCTTACGGTAAATCAGTGATTATATTCATCCTTGATAAGAATAAATAAATCAACTTTCTTTAATTTGATTTGGGGGTTGGGGAATCAACTAATTCCTATTGTGAATTACTTTTTTCTCTTATGTATGAGAAGTTACTTGCACAGTGTTTCTGCTATAGTTGGTTTGTATATCTGCAGCTGTCTCGTCAGCGGAAGGATACCATTTTAAGAAATTATCAATTTGCGAAAAATTGTAATCCCACTTTTCTATTTTAGGCAGACTCCAATAAAATATCAGGGGCTGATTAAAGTTTATACTTTTGTGTGCGCTCATTAACTTGCAATTCACTTGATCACTTGGAAACATGGGGATTACCAAGCTATCTACACGCAGCATAATGTCGTACATTTCTTGGCATAATTGTGTGATTGCTGTCATGTAACTATGTTGCTTCCTCTGTTTCATTTTGTCTAGTTTTGAGTTGATATGGAGTTTAAAGAAGTATAGAAAACTTTCTATACTTGTAGTCTTAAACTGAAGATACGTAGAATATTCCAAAATGTTCTTTAATCTTAAACATGTTGCATGAAAAATTAGAATTTAAGTGTTACAGAAAGAAAGAGGAAAATATGCGTTCTTTTTTAAATGAGACTAAACATGAAAGTAAAATAAACAAACAGAAAACGGAGGGAATAAATTGAAGGTAATAACCAAGTCAACTGCAATCTCAATCAAAACAGTGATTAGTGGGCTTGCTTCAACATAAGTTAACCAATGCTATTGCTTTTAGATGACGAGTTATGTAAACCTTTGTCAGCTTGGGAGACTTGCTTTTGTCTAAACCATAGTTGACTTCTAACTAGCATAATTTGTCTAGAAAATTCTCCTTTGATGTGCTTCTCTTGATAAATTTCTCTTGCTATAGCAACCTCCATTGTTAGGAGCATAGCTTCTCAGTTTTTGTATCTACTTGCCGAGACCGGATGGAACATTATTTTGTTTCATTTTCTTATTAGCTCAAACACTCAGCTTTTCTCTGTGACTCTTTCTAAAGCTTTTCTATGTCATTTGACTCAGATTCCATTTTCTTGGGTGTCTTGTGAAGAATTAAATTAGAAAGGTTTAAAACTATATCACATGGTCTTGGCCCTCAAGTGTTGGCGTGTGAAATTTGCATTTCTAGAACATCGAATATAGGACCATAACAAGAAAATTTTTCCTTCGAAGTAAAATACTTTATAAGGATTTGAAAGTATGTTTGAAAGATAATAGAACAAATGCGTATACTTCAATAATTAAGGGGCCAAATGAAAAGAAATCCTCCTGTGCTCTTGCTTTCTTGGTCCTCTTCTCTTACTCTGTTGCTTTGTTGAGTATTCTATAGTTCGGGTAATTCAGTCCTTAAATCTTTATTTTCCTTGCTTGCTTATGTTCTAAAATTTCCTCTTTTGTTTTTTCTTGTTTCTTTTCTTTACTGTGAATAATAATATATTACTCCCATTATCCACTTCTTTTTCTTCGGGCACTTGCTCACATCCTTTCCATTGTAGGCAGATGATATCTGTTTCTACAAGGAACTAGATACATCATTCTGAGTGCTAGTCGCATTAATGGAAAATCAGAAATCTTCAGTTCCTGTTCTTCAGACTAACTCAGATGTTGTTACTTACAGTTTTTGGGTATGAACCACATTCTGTTTGGCCTATTGGGGCGGTTGCCCTTGCTGATCTTACAGGTTTCATGCCTCTCCCAAAAATCAAAGTGCTTGCGAGTACTGCTGTATGACTTGATTCCTTGTTCTTATATTTTAATTGTACATAAGTCTTATTTTCAGCTGTAGCATTTACTATGAAGAAACATTGACAGGTGTTTTATACACCTTTCTTGCGGCATATCTGGACATGGTTAGGACTTGCACCAATAACAAGGAAAAATTTTAAATCCCTCTTGGCATCTGGTTACAGCTGCATCATAGTGCCAGGTGGAGTTCAAGAAACATTCTATATGGAACACGGTTCAGAGGTTCAATCTCTAAACTTGATTGTATTTTCCAAACCAGTATATTATGCTGTACTCACCACATTTCTTCCTAACTCCTGGTAAGACCAAGTAGATGCACCCACAAAAAGGAGTTTTGATCAGGAATAACTAGTAGGAACTCATCAAAAGAGTATATAAGCTCTACTCTCTTTTCAACAAGTACTCTCTTCATTGGCTTGTAAACGACTTGATATTTAAGGAAAGAGATCTAGTTTTTCTTTCTTATGTGACCAGAAATTAAAGTATGTTTGGTGATGGCATGGTAAAAAAATTTCTATGAATCTTATGTTCCTTTTGGGTAAAACAATGTGCGAAATTGAGATTATTTCATATTCTTTAATGTGTGTGCTGGGCTAGAGAGGGGTTAAATCTTATTGCTCTCTTAACCTGTGATATAGATTGCTTACCTTCAAAAAAGAAAAGGATTTGTACGAATTGCAATAGAGACGGGCAAACCACTGGTTCCAGTTTTCTGTTTTGGTCAGGTGATATTTTGTTCTTCTATTTCCATTTTACGTAGTGTTCAAGTATTTACTTCCATCTTTGTGCTTCTATGCGTAAAGATGTCATTATTTGGGAATGAAATGTTCTCTATACTGTGCGAGTTTTGTATCCGTCTATATGATCAAAATTTCTAGCAGGACTGAATATTTTTCTTGCAAGCTATTAAAATATTTGGGTTGATATATAGTGTGTTATTGAAAAACTTTCCTGGTGTGTGCTTACGGTTTTACCTAAATTCTGCAGACTGCTATCTATAAA</genome_strand>
        <mrna_strand>CGGCA-GAGGGACTGCATAATTCCCTACTTTCTTTCTATAAATTTATAATCAATTCAGTAATTTCATATTTATTTTTTTCTGTTTTATTCGTTTCGATTTGGATTTTCACCCATGGCTATACAAGAGGATAATTCAATAATTCATCAACAGCCGGCGCCGCCGTCAGCTCCGACGCCGGTGGAGTTTAAAGGGGCAAATTCCGGGTCATTATTGCATACTGTATTGGCGTTGGTCTTATGGCTTGGCTCCGTCCATTTCAACTTCTTAATACTTATTGCTTCCTTTATTTTTCTTCCTTTCTCTAAAACAGTCAT.......................................................................................................AGTTATAGGAATATTGCTTATACTTATTCTCATTCCGATTGATGAGAAAAATAATTTTGGGCGAAGATTAGCTAG....................................................................................................GTACATCTGTAAGCATGCTTGTGGCTATTTTCCGGTCCATTTGTATGTAGAGGATATCAAAGCATTTGATCCTAATGAGGCTTACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGGGTATGAACCACATTCTGTTTGGCCTATTGGGGCGGTTGCCCTTGCTGATCTTACAGGTTTCATGCCTCTCCCAAAAATCAAAGTGCTTGCGAGTACTGCT.......................................................................................GTGTTTTATACACCTTTCTTGCGGCATATCTGGACATGGTTAGGACTTGCACCAATAACAAGGAAAAATTTTAAATCCCTCTTGGCATCTGGTTACAGCTGCATCATAGTGCCAGGTGGAGTTCAAGAAACATTCTATATGGAACACGGTTCAGAG................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTTACCTTCAAAAAAGAAAAGGATTTGTACGAATTGCAATAGAGACGGGCAAACCACTGGTTCCAGTTTTCTGTTTTGGTCAG......................................................................................................................................................................................................................................................................ACTGCTATCTATAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U587018" ref_strand="+" ref_description="SGN-U587018 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|118484433|gb|ABK94093.1| (e_value=2e-46) unknown; (*ATH) AT3G51510.1 (e_value=2e-45) | Symbol: None | expressed protein | chr3:19120041-19121030 FORWARD | Aliases: F26O13.150; ">
      <seq>tctgcaattccccttcttcaattatccattcctcaaaaacatctatacccaatttcattacattctcttccttaagttattacaagaaaaggggaaaatcgcttgcaagtcgtagccttggaattgttgctgctactgaaggttctgttaacaaatctagtggaaaagatgaggaaaaacaagaagacccatcagttcctacatgggctaaacccggtacggatgagcctccaccatgggctagaaatgaagcacagaaagattcttcaagcattcaagttccattcgttgtttatttgcttgcttctgctgtcacagcaattgcagcgattggttctattttcgagtacacgaatcagaaacctgtgtttggagttttgggttcagatagtgttttttatgctccattgcttgggttctttgtgttcactggcattcccacttctgcattcctttggttcaaatcagtacaagttgctaacaaggaggctgaggaacaagaccgcagggatggatatattctacttcctttgagcttttcaactctctggggcggtgaagttcatccatttctccaagagaagagaaaagatagggaagcaacatcatatgaagtcatgtgaacacaacttttgtccctgtagggaggacaattgtatttttccctcanaaatgaactttaatatagaaatatgtcatgggcatttcnaatcanaaaggaacttcaatatagaaatatgtcatnnnatttcaaatannaatgcatantgatgnactcaaactanttngct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="103544" stop="100213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103244" g_stop="102916" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="329" r_length="329" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102915" i_stop="102817" i_length="99">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102816" g_stop="102700" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="446" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102699" i_stop="101765" i_length="935">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.695" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101764" g_stop="101691" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="520" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101690" i_stop="100737" i_length="954">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.568" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="100736" g_stop="100464" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="791" r_length="271" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-U587018" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>793</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U587018" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103244" e_stop="102916"/>
          <exon e_start="102816" e_stop="102700"/>
          <exon e_start="101764" e_stop="101691"/>
          <exon e_start="100736" e_stop="100464"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGCAATTCCCCTTCTTCAATTATCCATTCCTCAAAAACATCTATACCCAATTTCATTACATTCTCTTCCTTAAGTTATTACAAGAAAAGGGGAAAATCGCTTGCAAGTCGTAGCCTTGGAATTGTTGCTGCTACTGAAGGTTCTGTTAACAAATCTAGTGGAAAAGATGAGGAAAAACAAGAAGACCCATCAGTTCCTACATGGGCTAAACCCGGTACGGATGAGCCTCCACCATGGGCTAGAAATGAAGCACAGAAAGATTCTTCAAGCATTCAAGTTCCATTCGTTGTTTATTTGCTTGCTTCTGCTGTCACAGCAATTGCAGCGGTGAGTTTTTTTCTTTTAAATCAGGAATTTCATTTTCTAGTGGAGAAGTTTTTTGGGGTCATTATAAAGATTGATTCTTGATTGGGTTTTTGAGTGCAGATTGGTTCTATTTTCGAGTACACGAATCAGAAACCTGTGTTTGGAGTTTTGGGTTCAGATAGTGTTTTTTATGCTCCATTGCTTGGGTTCTTTGTGTTCACTGGCATTCCCACTTCTGTAAGTTGATTTATTTTTTTCTCTGTTCATGTCTTTCTGCTGTTTACGTTATGTTGAATTGTTTTGAATGATGAAACTAAGTTAGCGTTTGACCATAAATTTTGGACTAAATTTTGGTAATTTATATTTTGAATATCCGTTTGGCCGTGAAATTTGATTAGTTTTTGAAAATATGATCCTCAAAATACTTTTCAAGTTCCCAAAAGGGGCTTTTTTAGTTTTTGGGACTTCCACTCACGAGACATCAAATGTATGGCCAAATACAACTTTAAGTTCTAAAACTAACAACTTCAAAGAGTTTCTACCTCCGTCTTCAAATCTATGGCCAAACGGGAGCTTAAGACTATACAAATTTGGTCTTTTTGCAAGTTCTGTTTTCAACCCACTTGTAGGTGATTTACTGCCTGTATTTCCATATTTTAAGATAATGGTAGCTACTTCTGTTATTTAAATTATAAGGTAACAATTTCATTAATTGGAAAGAGGAACCAATGAAGAAGTTCCTTAATAGATCTTTGTTTTGTTAGTTACATTTCGGTTCAAAAATATTCCCTTGTTTCAATTTGTTTGTTCTAATTTCCATTTTAGTCCGTTTAAGAAAGAACAGGTTTTTCCTTTTCTAGAAATTCGGTAATTCTAACTTTCTATATGATATGTTTAAGACTACAAAATTCAAAAGATATTTTTACTTTCTTGAATTCCGTGCCAAGTTAATACTAGACAAACAAATTGGCTAAATATGCCAGTCTTGCCTGCATGGTGAGTACTGTATGGCTGGCATAATTTGTGGAACCTAACAGGGTTGGCTCCTCGGCCGACCCTCCATTTAAAAATAATAATAATAATAAAATCAGGGGAGTACTACTTTTGGCAAAAAGAAAAAGGAAAAGTTGATGTTTCTATATTCATTTGAGCTGATTAGAACATATATCCAGGCATTCCTTTGGTTCAAATCAGTACAAGTTGCTAACAAGGAGGCTGAGGAACAAGACCGCAGGGATGGATATATGTAACATCTAATATGCAATCTTTAGGTGATATCTGCAGCATCTTATATGCATTTTTCAGATGTTGTTGATGGTTGTTTCCTAAAATACTATCATCGCAAATGAATACTTTCTCGAGGTTTGTTCTTTCTAGAGCAGCATGAGTGTAAAAATTGTCTTCTCAATACCAGTTATTCCGCTTTATCAATTCTAAAAGTCTTTAATCACCAGATTTGACTATTTCCATCTCTCATTTGAAAAAATAGTTTATCGATTTGTGGTTAGACAAGTTACTTGCTGATCTTTTGGCACAACTTGTGTAAGTTATCCACCAATCTGGTGTTGCTTCTTAACTCTTAACATATCGACCTTGGTAAATCACTAATTCTCTATCTTGTCCCTCACTACCAAGACTTAGGAGCTTGAGGCTTTGGTTCACAACGTATTTACTAATAAGTTGTAATAAATAGTCAAAAGAATATTCAAATAGGTCCTGTGAGTTAAATACATAGCATAACTTACAAGTTCAGTCTACTCTCATTTTGATGGTATATCAGCACTTATTCCTTCCTCTTATTTATTAAGTGAACGAAAAAAGTTCACACTCTAATAGCATCATAGCATGTATTGTCTGCTTGCCTTCACATGTCTTTTTGGTTTCAAGTGTTTGTACCTAAGAAACCAGCAAGTCATTTGTTTCTTGGAATTGAGTAGTGATATCTGCAGAATGGTTTGATACTACATTCTACATGTTGTATTTCATTTCTTTGAAATAGGATCGATATAGTTCTTAATCTGAAGACTATCTCTAAAGTATGCTTATATTGCTTTAGTTTACTGTTTCTCATTTTTGTAGTATCTGCCTGAGAATTTCTTGAAAAACTGATCGCGAGCTAGTAAAAAAAAATGTTCAGTCGTTCCACAACATTCTCTCTCCTTCCTCGTTGTGCTATCACACAGAACTCTGAATTTTGCAGTCTACTTCCTTTGAGCTTTTCAACTCTCTGGGGCGGTGAAGTTCATCCATTTCTCCAAGAGAAGAGAAAAGATAGGGAAGCAACATCATATGAAGTCATGTGAACACAACTTTTGTCCCTGTAGGGAGGACAATTGTATTTTTCCCTCAGAAATGAACTTTAATATAGAAATATGTCATGGGCATTTCGAATCAGAAAGGAACTTCAATATAGAAATATGTCATGGGCATTTCAAATATAAATGCATAGTGATTGCACTCAAACTATTTGGCT</genome_strand>
        <mrna_strand>TCTGCAATTCCCCTTCTTCAATTATCCATTCCTCAAAAACATCTATACCCAATTTCATTACATTCTCTTCCTTAAGTTATTACAAGAAAAGGGGAAAATCGCTTGCAAGTCGTAGCCTTGGAATTGTTGCTGCTACTGAAGGTTCTGTTAACAAATCTAGTGGAAAAGATGAGGAAAAACAAGAAGACCCATCAGTTCCTACATGGGCTAAACCCGGTACGGATGAGCCTCCACCATGGGCTAGAAATGAAGCACAGAAAGATTCTTCAAGCATTCAAGTTCCATTCGTTGTTTATTTGCTTGCTTCTGCTGTCACAGCAATTGCAGCG...................................................................................................ATTGGTTCTATTTTCGAGTACACGAATCAGAAACCTGTGTTTGGAGTTTTGGGTTCAGATAGTGTTTTTTATGCTCCATTGCTTGGGTTCTTTGTGTTCACTGGCATTCCCACTTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTCCTTTGGTTCAAATCAGTACAAGTTGCTAACAAGGAGGCTGAGGAACAAGACCGCAGGGATGGATATAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACTTCCTTTGAGCTTTTCAACTCTCTGGGGCGGTGAAGTTCATCCATTTCTCCAAGAGAAGAGAAAAGATAGGGAAGCAACATCATATGAAGTCATGTGAACACAACTTTTGTCCCTGTAGGGAGGACAATTGTATTTTTCCCTCANAAATGAACTTTAATATAGAAATATGTCATGGGCATTTCNAATCANAAAGGAACTTCAATATAGAAATATGTCAT-NNNATTTCAAATANNAATGCATANTGA-TGNACTCAAACTANTTNGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U586244" ref_strand="+" ref_description="SGN-U586244 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|118484433|gb|ABK94093.1| (e_value=5e-46) unknown; (*ATH) AT3G51510.1 (e_value=7e-45) | Symbol: None | expressed protein | chr3:19120041-19121030 FORWARD | Aliases: F26O13.150; ">
      <seq>gagtgaacctctttatctcttattcacaattgattgccatattccaccatgaaaatatacagtgcaaaaaacatcaacaaaaatggtggcattagcttcttcatctctctgcaattccccttcttcaattatccattcctcaaaaacatctatacccaatttcattacattctcttccttaagttattacaagaaaaggggaaaatcgcttgcaagtcgtagccttggaattgttgctgctactgaaggttctgttaacaaatctagtggaaaagatgaggaaaaacaagaagacccatcagttcctacatgggctaaacccggtacggatgagcctccaccatgggctagaaatgaagcacagaaagattcttcaagcattcaagttccattcgttgtttatttgcttgcttctgctgtcacagcaattgcagcgattggttctattttcgagtacacgaatcagaaacctgtgtttggagttttgggttcagatagtgttttttatgctccattgcttgggttctttgtgttcactggcattcccacttctgcattcctttggttcaaatcagtacaagttgctaacaaggaggctgaggaacaagaccgcagggatggatatatgtaacatctaatatgcaatctttaggtgatatctgcagcatcttatatgcatttttcagatgttgttgatggttgtttcctaaaatactatcatcgcaaatgaatactttctcgaggtttgttctttctagagcagcatgagtgtaaaaattgtcttctcaataccagttattccgctttatcaattctaaaagtctttaatcaccagatttgactatttccatctctcatttgaaaaaatagtttatcgatttgtggttagacaagttacttgctgatcttttggcacaacttgtgtaagttatccaccaatctggtgttgcttcttaactcttaacatatcgaccttggtaaatcactaattctctatcttgtccctcactaccaagacttaggagcttgaggctttggttcacaacgtatttactaataagttgtaataaatagtcaaaagaatattcaaataggtcctgtgagttaaatacatagcataacttacaagttcagtctactctcattttgatggtatatcagcacttattccttcctcttatttattaagtgaacgaaaaaagttcacactctaatagcatcatagcatgtattgtctgcttgccttcacatgtctttttggtttcaagtgtttgtacctaagaaaccagcaagtcatttgtttcttggaattgagtagtgatatctgcagaatggtttgatactacattctacatgttgtatttcatttctttgaaataggatcgatatagttcttaatctgaagactatctctaaagtatgcttatattgctttagtttactgtttctcatttttgtagtatctgcctgagaatttcttgaaaaactgatcgcgagctagtaaaaaaaaatgttcagtcgttccacaacattctctctccttcctcgttgtgctatcacacagaactctgaattttgcagtctacttcctttgagcttttcaactctctggggcggtgaagttcatccatttctccaagagaagagaaaagatagggaagcaacatcatatgaagtcatgtgaacacaacttttgtccctgtagggaggacaattgtatttttccctcagaaatgaactttaatatagaaatatgtcatgggcatttcgaatcagaaaggaacttcaatatagaaatatgtcatgggcatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="-" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="103651" stop="100204"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103351" g_stop="102916" g_length="436"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="436" r_length="436" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102915" i_stop="102817" i_length="99">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102816" g_stop="102700" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="553" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102699" i_stop="101765" i_length="935">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.695" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101764" g_stop="100504" g_length="1261"/>
          <reference_exon_boundary r_type="cDNA" r_start="554" r_stop="1814" r_length="1261" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="-" ref_id="SGN-U586244" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1814</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U586244" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103351" e_stop="102916"/>
          <exon e_start="102816" e_stop="102700"/>
          <exon e_start="101764" e_stop="100504"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTGAACCTCTTTATCTCTTATTCACAATTGATTGCCATATTCCACCATGAAAATATACAGTGCAAAAAACATCAACAAAAATGGTGGCATTAGCTTCTTCATCTCTCTGCAATTCCCCTTCTTCAATTATCCATTCCTCAAAAACATCTATACCCAATTTCATTACATTCTCTTCCTTAAGTTATTACAAGAAAAGGGGAAAATCGCTTGCAAGTCGTAGCCTTGGAATTGTTGCTGCTACTGAAGGTTCTGTTAACAAATCTAGTGGAAAAGATGAGGAAAAACAAGAAGACCCATCAGTTCCTACATGGGCTAAACCCGGTACGGATGAGCCTCCACCATGGGCTAGAAATGAAGCACAGAAAGATTCTTCAAGCATTCAAGTTCCATTCGTTGTTTATTTGCTTGCTTCTGCTGTCACAGCAATTGCAGCGGTGAGTTTTTTTCTTTTAAATCAGGAATTTCATTTTCTAGTGGAGAAGTTTTTTGGGGTCATTATAAAGATTGATTCTTGATTGGGTTTTTGAGTGCAGATTGGTTCTATTTTCGAGTACACGAATCAGAAACCTGTGTTTGGAGTTTTGGGTTCAGATAGTGTTTTTTATGCTCCATTGCTTGGGTTCTTTGTGTTCACTGGCATTCCCACTTCTGTAAGTTGATTTATTTTTTTCTCTGTTCATGTCTTTCTGCTGTTTACGTTATGTTGAATTGTTTTGAATGATGAAACTAAGTTAGCGTTTGACCATAAATTTTGGACTAAATTTTGGTAATTTATATTTTGAATATCCGTTTGGCCGTGAAATTTGATTAGTTTTTGAAAATATGATCCTCAAAATACTTTTCAAGTTCCCAAAAGGGGCTTTTTTAGTTTTTGGGACTTCCACTCACGAGACATCAAATGTATGGCCAAATACAACTTTAAGTTCTAAAACTAACAACTTCAAAGAGTTTCTACCTCCGTCTTCAAATCTATGGCCAAACGGGAGCTTAAGACTATACAAATTTGGTCTTTTTGCAAGTTCTGTTTTCAACCCACTTGTAGGTGATTTACTGCCTGTATTTCCATATTTTAAGATAATGGTAGCTACTTCTGTTATTTAAATTATAAGGTAACAATTTCATTAATTGGAAAGAGGAACCAATGAAGAAGTTCCTTAATAGATCTTTGTTTTGTTAGTTACATTTCGGTTCAAAAATATTCCCTTGTTTCAATTTGTTTGTTCTAATTTCCATTTTAGTCCGTTTAAGAAAGAACAGGTTTTTCCTTTTCTAGAAATTCGGTAATTCTAACTTTCTATATGATATGTTTAAGACTACAAAATTCAAAAGATATTTTTACTTTCTTGAATTCCGTGCCAAGTTAATACTAGACAAACAAATTGGCTAAATATGCCAGTCTTGCCTGCATGGTGAGTACTGTATGGCTGGCATAATTTGTGGAACCTAACAGGGTTGGCTCCTCGGCCGACCCTCCATTTAAAAATAATAATAATAATAAAATCAGGGGAGTACTACTTTTGGCAAAAAGAAAAAGGAAAAGTTGATGTTTCTATATTCATTTGAGCTGATTAGAACATATATCCAGGCATTCCTTTGGTTCAAATCAGTACAAGTTGCTAACAAGGAGGCTGAGGAACAAGACCGCAGGGATGGATATATGTAACATCTAATATGCAATCTTTAGGTGATATCTGCAGCATCTTATATGCATTTTTCAGATGTTGTTGATGGTTGTTTCCTAAAATACTATCATCGCAAATGAATACTTTCTCGAGGTTTGTTCTTTCTAGAGCAGCATGAGTGTAAAAATTGTCTTCTCAATACCAGTTATTCCGCTTTATCAATTCTAAAAGTCTTTAATCACCAGATTTGACTATTTCCATCTCTCATTTGAAAAAATAGTTTATCGATTTGTGGTTAGACAAGTTACTTGCTGATCTTTTGGCACAACTTGTGTAAGTTATCCACCAATCTGGTGTTGCTTCTTAACTCTTAACATATCGACCTTGGTAAATCACTAATTCTCTATCTTGTCCCTCACTACCAAGACTTAGGAGCTTGAGGCTTTGGTTCACAACGTATTTACTAATAAGTTGTAATAAATAGTCAAAAGAATATTCAAATAGGTCCTGTGAGTTAAATACATAGCATAACTTACAAGTTCAGTCTACTCTCATTTTGATGGTATATCAGCACTTATTCCTTCCTCTTATTTATTAAGTGAACGAAAAAAGTTCACACTCTAATAGCATCATAGCATGTATTGTCTGCTTGCCTTCACATGTCTTTTTGGTTTCAAGTGTTTGTACCTAAGAAACCAGCAAGTCATTTGTTTCTTGGAATTGAGTAGTGATATCTGCAGAATGGTTTGATACTACATTCTACATGTTGTATTTCATTTCTTTGAAATAGGATCGATATAGTTCTTAATCTGAAGACTATCTCTAAAGTATGCTTATATTGCTTTAGTTTACTGTTTCTCATTTTTGTAGTATCTGCCTGAGAATTTCTTGAAAAACTGATCGCGAGCTAGTAAAAAAAAATGTTCAGTCGTTCCACAACATTCTCTCTCCTTCCTCGTTGTGCTATCACACAGAACTCTGAATTTTGCAGTCTACTTCCTTTGAGCTTTTCAACTCTCTGGGGCGGTGAAGTTCATCCATTTCTCCAAGAGAAGAGAAAAGATAGGGAAGCAACATCATATGAAGTCATGTGAACACAACTTTTGTCCCTGTAGGGAGGACAATTGTATTTTTCCCTCAGAAATGAACTTTAATATAGAAATATGTCATGGGCATTTCGAATCAGAAAGGAACTTCAATATAGAAATATGTCATGGGCATTTC</genome_strand>
        <mrna_strand>GAGTGAACCTCTTTATCTCTTATTCACAATTGATTGCCATATTCCACCATGAAAATATACAGTGCAAAAAACATCAACAAAAATGGTGGCATTAGCTTCTTCATCTCTCTGCAATTCCCCTTCTTCAATTATCCATTCCTCAAAAACATCTATACCCAATTTCATTACATTCTCTTCCTTAAGTTATTACAAGAAAAGGGGAAAATCGCTTGCAAGTCGTAGCCTTGGAATTGTTGCTGCTACTGAAGGTTCTGTTAACAAATCTAGTGGAAAAGATGAGGAAAAACAAGAAGACCCATCAGTTCCTACATGGGCTAAACCCGGTACGGATGAGCCTCCACCATGGGCTAGAAATGAAGCACAGAAAGATTCTTCAAGCATTCAAGTTCCATTCGTTGTTTATTTGCTTGCTTCTGCTGTCACAGCAATTGCAGCG...................................................................................................ATTGGTTCTATTTTCGAGTACACGAATCAGAAACCTGTGTTTGGAGTTTTGGGTTCAGATAGTGTTTTTTATGCTCCATTGCTTGGGTTCTTTGTGTTCACTGGCATTCCCACTTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTCCTTTGGTTCAAATCAGTACAAGTTGCTAACAAGGAGGCTGAGGAACAAGACCGCAGGGATGGATATATGTAACATCTAATATGCAATCTTTAGGTGATATCTGCAGCATCTTATATGCATTTTTCAGATGTTGTTGATGGTTGTTTCCTAAAATACTATCATCGCAAATGAATACTTTCTCGAGGTTTGTTCTTTCTAGAGCAGCATGAGTGTAAAAATTGTCTTCTCAATACCAGTTATTCCGCTTTATCAATTCTAAAAGTCTTTAATCACCAGATTTGACTATTTCCATCTCTCATTTGAAAAAATAGTTTATCGATTTGTGGTTAGACAAGTTACTTGCTGATCTTTTGGCACAACTTGTGTAAGTTATCCACCAATCTGGTGTTGCTTCTTAACTCTTAACATATCGACCTTGGTAAATCACTAATTCTCTATCTTGTCCCTCACTACCAAGACTTAGGAGCTTGAGGCTTTGGTTCACAACGTATTTACTAATAAGTTGTAATAAATAGTCAAAAGAATATTCAAATAGGTCCTGTGAGTTAAATACATAGCATAACTTACAAGTTCAGTCTACTCTCATTTTGATGGTATATCAGCACTTATTCCTTCCTCTTATTTATTAAGTGAACGAAAAAAGTTCACACTCTAATAGCATCATAGCATGTATTGTCTGCTTGCCTTCACATGTCTTTTTGGTTTCAAGTGTTTGTACCTAAGAAACCAGCAAGTCATTTGTTTCTTGGAATTGAGTAGTGATATCTGCAGAATGGTTTGATACTACATTCTACATGTTGTATTTCATTTCTTTGAAATAGGATCGATATAGTTCTTAATCTGAAGACTATCTCTAAAGTATGCTTATATTGCTTTAGTTTACTGTTTCTCATTTTTGTAGTATCTGCCTGAGAATTTCTTGAAAAACTGATCGCGAGCTAGTAAAAAAAAATGTTCAGTCGTTCCACAACATTCTCTCTCCTTCCTCGTTGTGCTATCACACAGAACTCTGAATTTTGCAGTCTACTTCCTTTGAGCTTTTCAACTCTCTGGGGCGGTGAAGTTCATCCATTTCTCCAAGAGAAGAGAAAAGATAGGGAAGCAACATCATATGAAGTCATGTGAACACAACTTTTGTCCCTGTAGGGAGGACAATTGTATTTTTCCCTCAGAAATGAACTTTAATATAGAAATATGTCATGGGCATTTCGAATCAGAAAGGAACTTCAATATAGAAATATGTCATGGGCATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U566125" ref_strand="+" ref_description="SGN-U566125 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|27529828|dbj|BAC53929.1| (e_value=3e-101) serine protease-like protein [Nicotiana tabacum]; (*ATH) AT4G10520.1 (e_value=5e-45) | Symbol: None | subtilase family protein, contains similarity to subtilase; SP1 GI:9957714 from (Oryza sativa) | chr4:6499790-6502862 FORWARD | Aliases: F7L13.100, F7L13_100; (*SWP) sp|Q39547|CUCM1_CUCME (e_value=3e-31) Cucumisin OS=Cucumis melo; ">
      <seq>tctcgtatccattttcttttgtctaaacaatcgcgaaaaaaaggatttaagagatcgaatatgattatatgaaatatctcttaattttatccgacgcagtacgtcaatggaaatatattatgtctactactattacacagtatacctgtgactgaataatctctttctctttctctctccctctcctctttattttcaaatcattctctctctctgtgtgtcttgttctgctataaaaaacctcatctttttttgttttcatcttgtagttgataatacattcttttactagccttatacatcaagataggagatgggtgtttcaaaaaagactctttttttactatttgttagtgtttttcttggagaaattagtctctgctcttctaccaagttatatgtggtgtacatgggaagcaaagatagtgatgagcatcaagatgagattttgaggcaaaaccatcaaatgcttactgatattcatggaggaaatgttgaacaagccaagagttctcatgtatacagttatagacatggttttaaaggctttgcagccaagttgactgagaaacaggcttctgaaatatctaaaatgcctggtgtggtatctgtatttccaaatactaagagaaacctgcatacaactcattcatgggattttatggggctcagtgaagatgaaacaatggaaatcccaggtttttccaccaagaaccaagttaatgtaatcattggtttcattgatacaggaatttggcctgagtctccaagttttagggacacccacatgcctccngtgcctgctggatggaaaggacaatgccaatcaggggaagcattcaatgcctcaatatgcaacaggaaaataattggggcaagatattatatgagtggctatgcagctgaanaanatgaaaagatcatgttcaagtctgccngnnnagttctggncatggnngtcatacagcttcanntgctgctgggcgttatgtagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="113494" stop="116008"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113794" g_stop="114186" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="394" r_length="394" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="114187" i_stop="114276" i_length="90">
            <donor d_prob="0.267" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="114277" g_stop="114374" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="492" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="114375" i_stop="114470" i_length="96">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="114471" g_stop="114568" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="493" r_stop="590" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="114569" i_stop="114659" i_length="91">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="114660" g_stop="114818" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="591" r_stop="749" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="114819" i_stop="115375" i_length="557">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.850" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="115376" g_stop="115487" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="750" r_stop="861" r_length="112" r_score="0.991"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="115488" i_stop="115572" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="115573" g_stop="115708" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="862" r_stop="996" r_length="135" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-U566125" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>996</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U566125" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113794" e_stop="114186"/>
          <exon e_start="114277" e_stop="114374"/>
          <exon e_start="114471" e_stop="114568"/>
          <exon e_start="114660" e_stop="114818"/>
          <exon e_start="115376" e_stop="115487"/>
          <exon e_start="115573" e_stop="115708"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACGTTTCCATTTTCTTTTGTCTAAGCAATCGCGAAAAAAATTATTTAAGAGATCGAATATGATTATATGAAATATCTCTTAATTTTATCCGACGCAGTACGTTAATGGAAATATATTTTGTCTACTACTATTACACAGTATACCTGTGACTGAATAATCTCTTTCTCTTTCTCTCTCCCTCTCCTCTTTATTTTCAAATCATTCTCTCTCTCTGTGTGTCTTGTTCTGCTATAAAAAACCTCATCTTTTTTT-TTTTCATCTTGTAGTTGATAATACATTCTTTTACTAGCCTTATACATCAAGATAGGAGATGGGTGTTTCAAAAAAGACTCTTTTTTTACTATTTGTTAGTGTTTTTCTTGGAGAAATTAGTCTCTGCTCTTCTACCAAGGTAAATTTGGCTCTGTGTGAACTATGGGGACATATGGGGTTTTCTTTGAATGATGAATAGTTAGTAAAGTTGTGTTTTTTCTGTGTTTAGTTATATGTGGTGTACATGGGAAGCAAAGATAGTGATGAGCATCAAGATGAGATTTTGAGGCAAAACCATCAAATGCTTACTGATATTCATGGAGGAAAGTAAGTTGTTGGTACTTTTAGCTATGAGTTTGTTTTCCCCCTTTTTGTCTGTTTTTGGCAAAAATAAAAAACTGAAGTGGTTAATAATCTTTACAGTGTTGAACAAGCCAAGAGTTCTCATGTATACAGTTATAGACATGGTTTTAAAGGCTTTGCAGCCAAGTTGACTGAGAAACAGGCTTCTGAAATATCTAGTGAGTCTTTTACCTAATGTTTTATGTTACTGTTGATTACCTAATTTGATGGTTTGTACTCAGTCCACTGTTTGATGTTGAAACAAAACAGAAATGCCTGGTGTGGTATCTGTATTTCCAAATACTAAGAGAAACCTGCATACAACTCATTCATGGGATTTTATGGGGCTCAGTGAAGATGAAACAATGGAAATCCCAGGTTTTTCCACCAAGAACCAAGTTAATGTAATCATTGGTTTCATTGATACAGGTGATCATTTCTCTGTTCAACTAGCTCAAAGTTGTCTTAATTGCTGCAATCTTGTTCCAGTTAGGTGAAAGATATGATTGTTTAGGTGATCGATGGCACAAACAAAGTCGGTCCCTTCACTGATTGTGTTGTCACGTAATCACTAGTTACTTTTCTTAAGAAGAGTACAATAACATGACTCTGAAAAAGTGCTGAGTTTGTCATTTAGGTACATATGGTTGAACCTGGGGAAAGTAGTTCCTTTAGTACGTTGTTCCCTTTTCATCTCTGTAGGCATGTAGGATAAGTTTTACTGCGCATCAATCAATTCTTGTTTCAATCATTTGAGAATGATGGGATATGTTTGCTTAGATTTTCTTTAGCCCAAGTTTATTCAATTTTTCAACTTCCCAGTTTCTTCTTTGCATTTGTTGTACTGCTTGTGAATGTAAATAGAGTAAAGTCATCTCTCTGTTCATAACCTTATCAGTTTATCATTAGCCTGGTCCCCAGCTTCCTTGTTTTTTTCGAACTAATTAGATTTTGAGGTTAAGATCTTGAGACATTTACTGAAACAGGAATTTGGCCTGAGTCTCCAAGTTTTAGGGACACCCACATGCCTCCAGTGCCTGCTGGATGGAAAGGACAATGCCAATCAGGGGAAGCATTCAATGCCTCAATATGCAACAGGTTTCTTTTAATTATCAACCATTTCTTGCAGTTTAATGTATTGTTTTATAGATGACAAGTCTAATAAGAATTTTGTCTTGTATAGGAAAATAATTGGGGCAAGATATTATATGAGTGGCTATGCAGCTGAAGAAGATGAAAAGATCATGTTCAAGTCTGCCAGGGACAGTTCTGGTCATGGAAGTCATACAGCTTCAACTGCTGCTGGGCGTTATGTAGCT</genome_strand>
        <mrna_strand>TCTCGTATCCATTTTCTTTTGTCTAAACAATCGCGAAAAAAAGGATTTAAGAGATCGAATATGATTATATGAAATATCTCTTAATTTTATCCGACGCAGTACGTCAATGGAAATATATTATGTCTACTACTATTACACAGTATACCTGTGACTGAATAATCTCTTTCTCTTTCTCTCTCCCTCTCCTCTTTATTTTCAAATCATTCTCTCTCTCTGTGTGTCTTGTTCTGCTATAAAAAACCTCATCTTTTTTTGTTTTCATCTTGTAGTTGATAATACATTCTTTTACTAGCCTTATACATCAAGATAGGAGATGGGTGTTTCAAAAAAGACTCTTTTTTTACTATTTGTTAGTGTTTTTCTTGGAGAAATTAGTCTCTGCTCTTCTACCAAG..........................................................................................TTATATGTGGTGTACATGGGAAGCAAAGATAGTGATGAGCATCAAGATGAGATTTTGAGGCAAAACCATCAAATGCTTACTGATATTCATGGAGGAAA................................................................................................TGTTGAACAAGCCAAGAGTTCTCATGTATACAGTTATAGACATGGTTTTAAAGGCTTTGCAGCCAAGTTGACTGAGAAACAGGCTTCTGAAATATCTA...........................................................................................AAATGCCTGGTGTGGTATCTGTATTTCCAAATACTAAGAGAAACCTGCATACAACTCATTCATGGGATTTTATGGGGCTCAGTGAAGATGAAACAATGGAAATCCCAGGTTTTTCCACCAAGAACCAAGTTAATGTAATCATTGGTTTCATTGATACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTTGGCCTGAGTCTCCAAGTTTTAGGGACACCCACATGCCTCCNGTGCCTGCTGGATGGAAAGGACAATGCCAATCAGGGGAAGCATTCAATGCCTCAATATGCAACAG.....................................................................................GAAAATAATTGGGGCAAGATATTATATGAGTGGCTATGCAGCTGAANAANATGAAAAGATCATGTTCAAGTCTGCC-NGNNNAGTTCTGGNCATGGNNGTCATACAGCTTCANNTGCTGCTGGGCGTTATGTAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U566126" ref_strand="+" ref_description="SGN-U566126 Tomato 200607#2 [13 ESTs aligned] (*GB) gi|27529828|dbj|BAC53929.1| (e_value=0) serine protease-like protein [Nicotiana tabacum]; (*ATH) AT4G34980.1 (e_value=3e-141) | Symbol: None | subtilase family protein, similar to SBT1, a subtilase from tomato plants GI:1771160 from (Lycopersicon esculentum) | chr4:16656696-16659344 REVERSE | Aliases: M4E13.40, M4E13_40; (*SWP) sp|O65351|SUBL_ARATH (e_value=5e-69) Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12; ">
      <seq>gggaatttggcctgagtctccaagttttagggacacccacatgcctccagtgcctgctggatggaaaggacaatgccaatcaggggaagcattcaatgcctcaatatgcaacaggaaaataattggggcaagatattatatgagtggctatgcagctgaagaagatgaaaagatcatgttcaagtctgccagggacagttctggtcatggaagtcatacagcttcaactgctgctgggcgttatgtagctgatatgaattacaaaggtttggcatctggaggagccagaggtggtgccccaatggccaggatagcagtgtacaaaacctgctggagttctggttgctatgatgttgatttgttggctgcatttgatgatgcaattagagatggggttcatgtcatttctatatctttgggcccagatgctccccaaggagattattttagtgatgcaatttctgtggggtcatttcatgctgttagccgtgggatacttgtagtggcctccgttggaaatgaaggaacctctggttcagccacaaatttagctccttggatgatcacagttgcagccagttcaaccgatagagattttacatctgatgttttactaggaaatagagttcaactcacgggtgaaagtcttagcttatctcaaatgcatacatctgcaaaaatcatacctgcttctgaagcttatgctggatacttcactccttatcaatccaggtgaagcagaagttattgcttagatagttctttgaatagaactaaggccaaagggaaggttcttgtgtgtcgacatgctggaagctcaagtgagtcaaagctggagaaaagcaatatagttaaacaagctggtggagttgggatgatccttattgatgaagcagacaagggtgtggctattcccttctccattccagcagcaactgttgggcaaaagattggaaaaaagatcctagcttacattaataatacacggttcacttctttgttagtggctgttgatatttgtttttattgttctttgatgttgttagcaatcatctcatctcttttatatttacagcctccctactgcaagaattctctctgctaaaactgttttgggagctcaacctgctcctcgagtaacagcattttcttcaagaggtcctaattctctaacaccagaaattttgaagcctgatattactgctcccggtttaaatatcctggcagcatggtccccagcaatgtctaggttgaagttcaacatactctctggaacctccatggcttgccctcacatatcaggagttgttgccttgttaaaagccgtgcatccatcatggtctccctctgcaatcaaatcagccatcatgacaacagccaaactatcagatatgcatcacaaacccataatagtagatcctgaagggaagaaggctaatccatttgattttggttctggatttgttaaccccacgaaagtcctcaatcctggtctgatatatgatgcacaaccagaagattacagagcatttctttgttcaattggttatgacgagaaatctctgcatctaattacaagggacaacagaacgtgtgatcaaacctttgcatcgccaaatgaactaaattatccctccatcacagtaccaaacctcagaaacaattactcagtatctcgaactgtcacaaatgtgggaaagtcaaggagtacttacaaggcagttatatttgcaccaaagggtatcaatgttactgtggtgccgcgaagattagccttcactagatattaccagaagatgaatttcacagtgactttcaaagtggctgcacctacacagggatatgtctttgggtccttgtcatggaggaacaaaagaacatgggtaacatctccacttgttgtcagagcacattccaatatgggtactgtggtatagttcagctgcagtgcctatttatttgtgttatagacaggtaagtaacaagatattgcaaccagtagctgctgaaaatggttgcatgaagaagccaacacaaaattcttagaagaatacatgtaattagtagcagaatacaaataattagtaattctttattctatttgtcctttagttttgagttttggttcttgctacctagtcaggttttactaatagggatactgcaaattcttttacttgtctagtaattgcattatgtattggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0146O12-Xinab/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0146O12.1" temp_strand="+" temp_description="C02HBa0146O12.1  AC215395.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0146O12 sequenced_by:kribb upload_account_name:korea">
        <position start="115075" stop="118583"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115374" g_stop="115487" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="115488" i_stop="115572" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="115573" g_stop="116095" g_length="523"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="637" r_length="523" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="116096" i_stop="116175" i_length="80">
            <donor d_prob="0.904" d_score="1.00"/>
            <acceptor a_prob="0.766" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="116176" g_stop="116282" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="638" r_stop="744" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="116283" i_stop="116364" i_length="82">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="116365" g_stop="116810" g_length="446"/>
          <reference_exon_boundary r_type="cDNA" r_start="745" r_stop="1190" r_length="446" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="116811" i_stop="117058" i_length="248">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="117059" g_stop="117245" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="1191" r_stop="1377" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="117246" i_stop="117454" i_length="209">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="117455" g_stop="118283" g_length="829"/>
          <reference_exon_boundary r_type="cDNA" r_start="1378" r_stop="2205" r_length="828" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0146O12.1" gen_strand="+" ref_id="SGN-U566126" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>2206</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0146O12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U566126" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115374" e_stop="115487"/>
          <exon e_start="115573" e_stop="116095"/>
          <exon e_start="116176" e_stop="116282"/>
          <exon e_start="116365" e_stop="116810"/>
          <exon e_start="117059" e_stop="117245"/>
          <exon e_start="117455" e_stop="118283"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAATTTGGCCTGAGTCTCCAAGTTTTAGGGACACCCACATGCCTCCAGTGCCTGCTGGATGGAAAGGACAATGCCAATCAGGGGAAGCATTCAATGCCTCAATATGCAACAGGTTTCTTTTAATTATCAACCATTTCTTGCAGTTTAATGTATTGTTTTATAGATGACAAGTCTAATAAGAATTTTGTCTTGTATAGGAAAATAATTGGGGCAAGATATTATATGAGTGGCTATGCAGCTGAAGAAGATGAAAAGATCATGTTCAAGTCTGCCAGGGACAGTTCTGGTCATGGAAGTCATACAGCTTCAACTGCTGCTGGGCGTTATGTAGCTGATATGAATTACAAAGGTTTGGCATCTGGAGGAGCCAGAGGTGGTGCCCCAATGGCCAGGATAGCAGTGTACAAAACCTGCTGGAGTTCTGGTTGCTATGATGTTGATTTGTTGGCTGCATTTGATGATGCAATTAGAGATGGGGTTCATGTCATTTCTATATCTTTGGGCCCAGATGCTCCCCAAGGAGATTATTTTAGTGATGCAATTTCTGTGGGGTCATTTCATGCTGTTAGCCGTGGGATACTTGTAGTGGCCTCCGTTGGAAATGAAGGAACCTCTGGTTCAGCCACAAATTTAGCTCCTTGGATGATCACAGTTGCAGCCAGTTCAACCGATAGAGATTTTACATCTGATGTTTTACTAGGAAATAGAGTTCAACTCACGGTAATCCCACTTTTCGAATAGTTCATATGTGAAGTTATATCCAGTTTCTATCTCCTCATTATGTTCTGGATATTTGGAAGGGTGAAAGTCTTAGCTTATCTCAAATGCATACATCTGCAAAAATCATACCTGCTTCTGAAGCTTATGCTGGATACTTCACTCCTTATCAATCCAGGTGAAGCAGAAGGTACTTAACTGTTTGTTAATTGTAGATATGTATGCATTGACAATTATATTAAAGTACTTTTCGTTCCTATCTTTTCCACTAGTTATTGCTTAGATAGTTCTTTGAATAGAACTAAGGCCAAAGGGAAGGTTCTTGTGTGTCGACATGCTGGAAGCTCAAGTGAGTCAAAGCTGGAGAAAAGCAATATAGTTAAACAAGCTGGTGGAGTTGGGATGATCCTTATTGATGAAGCAGACAAGGGTGTGGCTATTCCCTTCTCCATTCCAGCAGCAACTGTTGGGCAAAAGATTGGAAAAAAGATCCTAGCTTACATTAATAATACACGGTTCACTTCTTTGTTAGTGGCTGTTGATATTTGTTTTTATTGTTCTTTGATGTTGTTAGCAATCATCTCATCTCTTTTATATTTACAGCCTCCCTACTGCAAGAATTCTCTCTGCTAAAACTGTTTTGGGAGCTCAACCTGCTCCTCGAGTAACAGCATTTTCTTCAAGAGGTCCTAATTCTCTAACACCAGAAATTTTGAAGGTAATTTATTTGCTTAAAATAGTACCGAATTAAAAGTCTTTCAACTGCTCCTTTGTTTTCTACATCGATCCCTCTTTGCATTTATCATTTAGACCAACAAAGTCTTATGTTGCATCCTGAGATTTCCTTCCAGGATCTTCAATGTGGTTTTAGATTCTTTCTTTTAACTTTGCATCTCTTTGTTCCTACTTTATATGAGGATTTACTTTTTTTCTTGCAAGTAATATACCTGCTGATTTTCCTTGTAGCCTGATATTACTGCTCCCGGTTTAAATATCCTGGCAGCATGGTCCCCAGCAATGTCTAGGTTGAAGTTCAACATACTCTCTGGAACCTCCATGGCTTGCCCTCACATATCAGGAGTTGTTGCCTTGTTAAAAGCCGTGCATCCATCATGGTCTCCCTCTGCAATCAAATCAGCCATCATGACAACAGGTAAACTAGATGCCTTACATAGTCTAACTATGCAACTCTTGATTCTGAGGTTTGCTTTAAAGAAGGAAAAGGGTGAGGGGATCAAGATTTGGTTTTGTTTGAGCATATTATCTTAAAAATACTTATGGTTTTATTTGAGCATTGTATGTTAATGTATAAAGTGAATTTAACTATTACAGAATAATCTAATGTCATGAATGTTAATGCAGCCAAACTATCAGATATGCATCACAAACCCATAATAGTAGATCCTGAAGGGAAGAAGGCTAATCCATTTGATTTTGGTTCTGGATTTGTTAACCCCACGAAAGTCCTCAATCCTGGTCTGATATATGATGCACAACCAGAAGATTACAGAGCATTTCTTTGTTCAATTGGTTATGACGAGAAATCTCTGCATCTAATTACAAGGGACAACAGAACGTGTGATCAAACCTTTGCATCGCCAAATGAACTAAATTATCCCTCCATCACAGTACCAAACCTCAGAAACAATTACTCAGTATCTCGAACTGTCACAAATGTGGGAAAGTCAAGGAGTACTTACAAGGCAGTTATATTTGCACCAAAGGGTATCAATGTTACTGTGGTGCCGCGAAGATTAGCCTTCACTAGATATTACCAGAAGATGAATTTCACAGTGACTTTCAAAGTGGCTGCACCTACACAGGGATATGTCTTTGGGTCCTTGTCATGGAGGAACAAAAGAACATGGGTAACATCTCCACTTGTTGTCAGAGTGGCACATTCCAATATGGGTACTGTGGTATAGTTCAGCTGCAGTG-CTATTTATTTGTGTTATATA-AGGTAAGTAACAAGATATTGCAACCAGTAGCTGCTGAAAATGGTTGCATGAAGAAGCCAACACAAAATTCTTAGAAGAATACATGTAATTAGTAGCAGAATACAAATAATTAGTAATTCTTTATTCTATTTGTCCTTTAGTTTTGAGTTTTGGTTCTTGCTACCTAGTCAGGTTTTACTAATAGGGATACTGCAAATTCTTTTACTTGTCTAGTAATTGCATTATGTATTGGC</genome_strand>
        <mrna_strand>GGGAATTTGGCCTGAGTCTCCAAGTTTTAGGGACACCCACATGCCTCCAGTGCCTGCTGGATGGAAAGGACAATGCCAATCAGGGGAAGCATTCAATGCCTCAATATGCAACAG.....................................................................................GAAAATAATTGGGGCAAGATATTATATGAGTGGCTATGCAGCTGAAGAAGATGAAAAGATCATGTTCAAGTCTGCCAGGGACAGTTCTGGTCATGGAAGTCATACAGCTTCAACTGCTGCTGGGCGTTATGTAGCTGATATGAATTACAAAGGTTTGGCATCTGGAGGAGCCAGAGGTGGTGCCCCAATGGCCAGGATAGCAGTGTACAAAACCTGCTGGAGTTCTGGTTGCTATGATGTTGATTTGTTGGCTGCATTTGATGATGCAATTAGAGATGGGGTTCATGTCATTTCTATATCTTTGGGCCCAGATGCTCCCCAAGGAGATTATTTTAGTGATGCAATTTCTGTGGGGTCATTTCATGCTGTTAGCCGTGGGATACTTGTAGTGGCCTCCGTTGGAAATGAAGGAACCTCTGGTTCAGCCACAAATTTAGCTCCTTGGATGATCACAGTTGCAGCCAGTTCAACCGATAGAGATTTTACATCTGATGTTTTACTAGGAAATAGAGTTCAACTCACG................................................................................GGTGAAAGTCTTAGCTTATCTCAAATGCATACATCTGCAAAAATCATACCTGCTTCTGAAGCTTATGCTGGATACTTCACTCCTTATCAATCCAGGTGAAGCAGAAG..................................................................................TTATTGCTTAGATAGTTCTTTGAATAGAACTAAGGCCAAAGGGAAGGTTCTTGTGTGTCGACATGCTGGAAGCTCAAGTGAGTCAAAGCTGGAGAAAAGCAATATAGTTAAACAAGCTGGTGGAGTTGGGATGATCCTTATTGATGAAGCAGACAAGGGTGTGGCTATTCCCTTCTCCATTCCAGCAGCAACTGTTGGGCAAAAGATTGGAAAAAAGATCCTAGCTTACATTAATAATACACGGTTCACTTCTTTGTTAGTGGCTGTTGATATTTGTTTTTATTGTTCTTTGATGTTGTTAGCAATCATCTCATCTCTTTTATATTTACAGCCTCCCTACTGCAAGAATTCTCTCTGCTAAAACTGTTTTGGGAGCTCAACCTGCTCCTCGAGTAACAGCATTTTCTTCAAGAGGTCCTAATTCTCTAACACCAGAAATTTTGAAG........................................................................................................................................................................................................................................................CCTGATATTACTGCTCCCGGTTTAAATATCCTGGCAGCATGGTCCCCAGCAATGTCTAGGTTGAAGTTCAACATACTCTCTGGAACCTCCATGGCTTGCCCTCACATATCAGGAGTTGTTGCCTTGTTAAAAGCCGTGCATCCATCATGGTCTCCCTCTGCAATCAAATCAGCCATCATGACAACAG.................................................................................................................................................................................................................CCAAACTATCAGATATGCATCACAAACCCATAATAGTAGATCCTGAAGGGAAGAAGGCTAATCCATTTGATTTTGGTTCTGGATTTGTTAACCCCACGAAAGTCCTCAATCCTGGTCTGATATATGATGCACAACCAGAAGATTACAGAGCATTTCTTTGTTCAATTGGTTATGACGAGAAATCTCTGCATCTAATTACAAGGGACAACAGAACGTGTGATCAAACCTTTGCATCGCCAAATGAACTAAATTATCCCTCCATCACAGTACCAAACCTCAGAAACAATTACTCAGTATCTCGAACTGTCACAAATGTGGGAAAGTCAAGGAGTACTTACAAGGCAGTTATATTTGCACCAAAGGGTATCAATGTTACTGTGGTGCCGCGAAGATTAGCCTTCACTAGATATTACCAGAAGATGAATTTCACAGTGACTTTCAAAGTGGCTGCACCTACACAGGGATATGTCTTTGGGTCCTTGTCATGGAGGAACAAAAGAACATGGGTAACATCTCCACTTGTTGTCAGA---GCACATTCCAATATGGGTACTGTGGTATAGTTCAGCTGCAGTGCCTATTTATTTGTGTTATAGACAGGTAAGTAACAAGATATTGCAACCAGTAGCTGCTGAAAATGGTTGCATGAAGAAGCCAACACAAAATTCTTAGAAGAATACATGTAATTAGTAGCAGAATACAAATAATTAGTAATTCTTTATTCTATTTGTCCTTTAGTTTTGAGTTTTGGTTCTTGCTACCTAGTCAGGTTTTACTAATAGGGATACTGCAAATTCTTTTACTTGTCTAGTAATTGCATTATGTATTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>23</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="308" PGL_stop="1870"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="308" e_stop="428"/>
            <exon e_start="581" e_stop="1870"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="308" e_stop="428" e_length="121"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="429" i_stop="580" i_length="152"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="581" e_stop="1870" e_length="1290"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="308" stop="428"/>
              <exon start="581" stop="1870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574166" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAGGGTTGGTCGATTTACTTTCTCTCTAAAGAAGACGATCGACCGCTTCCCGGCGATTGTTAACGATCCTCTTCCCTTTTTTTAAGGCTGCGAATTCTCTCTCTCCGGCGAAATCAAGCTT : ATGCGAGATTCTTTTTGACTGTTGCATAGCTATGTCGGTTAACAATAATAATAACCCTAACAAGAATATCGGAGGACCATCTTCCTTTGGCAATTCACCGCCGGGGAATCCGATGGCACATCTCCAGGCACAATCACAAGGCCAGCAACAGATGCCTTCAGGGTTTCCTGGGGCATTTCAGCTATCGCAGCTATCTGCTGCACATGCCCAAGCAATTGCTCAAGCTCAGTCGAAAGTTCAGGCTCATGCGCAAGCTCAAGCACAAGCTCAAGCTGCTCATGCCCAGTTTCAGGCCCAGTTACAGGCTCAGGGTTTATCTCTTAGCCAGGCTCATGCTCTTGGCAATTTTGGTTCTTCCTCACCCTCGATGCCTGGAAGTGCTTTGGCAAAACGCTTACCTCAGAAACCTCCTGTGCGGCCACCTGCATTCACAACTACTAACACAATTTCTCCAATGAGAACAATGGAGCTTTCAGCGGCTGCTCGTAGGAAAAAGCAGAAGCTTCCTGAGAAGCACATGAACGAGAAGGTGGCAGCCATTTTGCCTGAATCTTCCCTTTATACTCAGCTCCTTGAGTTTGAATCTCGGGTTGATTCCGCTTTAACAAGAAAGAAAGTTGACATCCAGGAGTCATTGAAGAATCCACCTACTATTCAGAAGACGCTTCGAATTTATGTATTCAATAGTTTTGCTAATCAGGTTCGTACCATTCCTAAGAAGCCAACAGCTGAACCTCCTACATGGACTCTTAAGATTGTAGGAAGGATTTTGGAGGAGGGAATGGATCCTGATCAAGCTGCCATGTTTCAGAAAACTAGCTCCATGTACCCAAAGTTCTCTACTTTCTTCAAAAGAGTCACCATTTCCTTGGACCAGAAACTCTATCCTGATAACCATATTATAATTTGGGACTCTGCGCGATCTCCTGCACCTCAGGATGGTTTTGAGGTCAAAAGAAAAGGAGAGCAAGAGTTCACTGCTAATTTAAGACTAGAATTGAATTACATGCCTGAGAAATACAAACTTTCACCAGCTTTAACTGAAGTTCTGGGTATTGAGGTTGAGACTCGTGCTAGAATTGTCTCTTCTATCTGGCATTATGTTAAGGCTCGAAAGTTGCAGAACCCTGATGATCCTTCTTACTTCAACTGTGATCCTCCACTTCAGAAAGTTTTTGGGGAAGGAAAGGTTAAGTTCAATACAGTCACACAAAAGATCACACCTCATTTGTCTCCTCCACAACCCATACATTTGGAACACAGGATTAAGCTTTCTGGAAATAACCCTGT</gDNA_template>
            <first_frame> Q  G  W  S  I  Y  F  L  S  K  E  D  D  R  P  L  P  G  D  C  *  R  S  S  S  L  F  L  R  L  R  I  L  S  L  R  R  N  Q  A   : Y  A  R  F  F  L  T  V  A  *  L  C  R  L  T  I  I  I  T  L  T  R  I  S  E  D  H  L  P  L  A  I  H  R  R  G  I  R  W  H  I  S  R  H  N  H  K  A  S  N  R  C  L  Q  G  F  L  G  H  F  S  Y  R  S  Y  L  L  H  M  P  K  Q  L  L  K  L  S  R  K  F  R  L  M  R  K  L  K  H  K  L  K  L  L  M  P  S  F  R  P  S  Y  R  L  R  V  Y  L  L  A  R  L  M  L  L  A  I  L  V  L  P  H  P  R  C  L  E  V  L  W  Q  N  A  Y  L  R  N  L  L  C  G  H  L  H  S  Q  L  L  T  Q  F  L  Q  *  E  Q  W  S  F  Q  R  L  L  V  G  K  S  R  S  F  L  R  S  T  *  T  R  R  W  Q  P  F  C  L  N  L  P  F  I  L  S  S  L  S  L  N  L  G  L  I  P  L  *  Q  E  R  K  L  T  S  R  S  H  *  R  I  H  L  L  F  R  R  R  F  E  F  M  Y  S  I  V  L  L  I  R  F  V  P  F  L  R  S  Q  Q  L  N  L  L  H  G  L  L  R  L  *  E  G  F  W  R  R  E  W  I  L  I  K  L  P  C  F  R  K  L  A  P  C  T  Q  S  S  L  L  S  S  K  E  S  P  F  P  W  T  R  N  S  I  L  I  T  I  L  *  F  G  T  L  R  D  L  L  H  L  R  M  V  L  R  S  K  E  K  E  S  K  S  S  L  L  I  *  D  *  N  *  I  T  C  L  R  N  T  N  F  H  Q  L  *  L  K  F  W  V  L  R  L  R  L  V  L  E  L  S  L  L  S  G  I  M  L  R  L  E  S  C  R  T  L  M  I  L  L  T  S  T  V  I  L  H  F  R  K  F  L  G  K  E  R  L  S  S  I  Q  S  H  K  R  S  H  L  I  C  L  L  H  N  P  Y  I  W  N  T  G  L  S  F  L  E  I  T  L  </first_frame>
            <second_frame>  R  V  G  R  F  T  F  S  L  K  K  T  I  D  R  F  P  A  I  V  N  D  P  L  P  F  F  *  G  C  E  F  S  L  S  G  E  I  K  L  :  M  R  D  S  F  *  L  L  H  S  Y  V  G  *  Q  *  *  *  P  *  Q  E  Y  R  R  T  I  F  L  W  Q  F  T  A  G  E  S  D  G  T  S  P  G  T  I  T  R  P  A  T  D  A  F  R  V  S  W  G  I  S  A  I  A  A  I  C  C  T  C  P  S  N  C  S  S  S  V  E  S  S  G  S  C  A  S  S  S  T  S  S  S  C  S  C  P  V  S  G  P  V  T  G  S  G  F  I  S  *  P  G  S  C  S  W  Q  F  W  F  F  L  T  L  D  A  W  K  C  F  G  K  T  L  T  S  E  T  S  C  A  A  T  C  I  H  N  Y  *  H  N  F  S  N  E  N  N  G  A  F  S  G  C  S  *  E  K  A  E  A  S  *  E  A  H  E  R  E  G  G  S  H  F  A  *  I  F  P  L  Y  S  A  P  *  V  *  I  S  G  *  F  R  F  N  K  K  E  S  *  H  P  G  V  I  E  E  S  T  Y  Y  S  E  D  A  S  N  L  C  I  Q  *  F  C  *  S  G  S  Y  H  S  *  E  A  N  S  *  T  S  Y  M  D  S  *  D  C  R  K  D  F  G  G  G  N  G  S  *  S  S  C  H  V  S  E  N  *  L  H  V  P  K  V  L  Y  F  L  Q  K  S  H  H  F  L  G  P  E  T  L  S  *  *  P  Y  Y  N  L  G  L  C  A  I  S  C  T  S  G  W  F  *  G  Q  K  K  R  R  A  R  V  H  C  *  F  K  T  R  I  E  L  H  A  *  E  I  Q  T  F  T  S  F  N  *  S  S  G  Y  *  G  *  D  S  C  *  N  C  L  F  Y  L  A  L  C  *  G  S  K  V  A  E  P  *  *  S  F  L  L  Q  L  *  S  S  T  S  E  S  F  W  G  R  K  G  *  V  Q  Y  S  H  T  K  D  H  T  S  F  V  S  S  T  T  H  T  F  G  T  Q  D  *  A  F  W  K  *  P  C </second_frame>
            <third_frame>   G  L  V  D  L  L  S  L  *  R  R  R  S  T  A  S  R  R  L  L  T  I  L  F  P  F  F  K  A  A  N  S  L  S  P  A  K  S  S  L :   C  E  I  L  F  D  C  C  I  A  M  S  V  N  N  N  N  N  P  N  K  N  I  G  G  P  S  S  F  G  N  S  P  P  G  N  P  M  A  H  L  Q  A  Q  S  Q  G  Q  Q  Q  M  P  S  G  F  P  G  A  F  Q  L  S  Q  L  S  A  A  H  A  Q  A  I  A  Q  A  Q  S  K  V  Q  A  H  A  Q  A  Q  A  Q  A  Q  A  A  H  A  Q  F  Q  A  Q  L  Q  A  Q  G  L  S  L  S  Q  A  H  A  L  G  N  F  G  S  S  S  P  S  M  P  G  S  A  L  A  K  R  L  P  Q  K  P  P  V  R  P  P  A  F  T  T  T  N  T  I  S  P  M  R  T  M  E  L  S  A  A  A  R  R  K  K  Q  K  L  P  E  K  H  M  N  E  K  V  A  A  I  L  P  E  S  S  L  Y  T  Q  L  L  E  F  E  S  R  V  D  S  A  L  T  R  K  K  V  D  I  Q  E  S  L  K  N  P  P  T  I  Q  K  T  L  R  I  Y  V  F  N  S  F  A  N  Q  V  R  T  I  P  K  K  P  T  A  E  P  P  T  W  T  L  K  I  V  G  R  I  L  E  E  G  M  D  P  D  Q  A  A  M  F  Q  K  T  S  S  M  Y  P  K  F  S  T  F  F  K  R  V  T  I  S  L  D  Q  K  L  Y  P  D  N  H  I  I  I  W  D  S  A  R  S  P  A  P  Q  D  G  F  E  V  K  R  K  G  E  Q  E  F  T  A  N  L  R  L  E  L  N  Y  M  P  E  K  Y  K  L  S  P  A  L  T  E  V  L  G  I  E  V  E  T  R  A  R  I  V  S  S  I  W  H  Y  V  K  A  R  K  L  Q  N  P  D  D  P  S  Y  F  N  C  D  P  P  L  Q  K  V  F  G  E  G  K  V  K  F  N  T  V  T  Q  K  I  T  P  H  L  S  P  P  Q  P  I  H  L  E  H  R  I  K  L  S  G  N  N  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="337" stop="428"/>
                    <exon start="581" stop="1868"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1380</number_coding_nucleotides>
                  <number_encoded_amino_acids>460</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RRRSTASRRLLTILFPFFKAANSLSPAKSSLCEILFDCCIAMSVNNNNNPNKNIGGPSSFGNSPPGNPMAHLQAQSQGQQQMPSGFPGAFQLSQLSAAHAQAIAQAQSKVQAHAQAQAQAQAAHAQFQAQLQAQGLSLSQAHALGNFGSSSPSMPGSALAKRLPQKPPVRPPAFTTTNTISPMRTMELSAAARRKKQKLPEKHMNEKVAAILPESSLYTQLLEFESRVDSALTRKKVDIQESLKNPPTIQKTLRIYVFNSFANQVRTIPKKPTAEPPTWTLKIVGRILEEGMDPDQAAMFQKTSSMYPKFSTFFKRVTISLDQKLYPDNHIIIWDSARSPAPQDGFEVKRKGEQEFTANLRLELNYMPEKYKLSPALTEVLGIEVETRARIVSSIWHYVKARKLQNPDDPSYFNCDPPLQKVFGEGKVKFNTVTQKITPHLSPPQPIHLEHRIKLSGNNP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="4614" PGL_stop="8375"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="4614" e_stop="4711"/>
            <exon e_start="4813" e_stop="4900"/>
            <exon e_start="4978" e_stop="5072"/>
            <exon e_start="7519" e_stop="7595"/>
            <exon e_start="7893" e_stop="8375"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.983" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.848" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="4614" e_stop="4711" e_length="98"/>
          </exon>
          <intron i_serial="1" don_prob="0.983" acc_prob="0.996">
            <gDNA_intron_boundary i_start="4712" i_stop="4812" i_length="101"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="4813" e_stop="4900" e_length="88"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.996">
            <gDNA_intron_boundary i_start="4901" i_stop="4977" i_length="77"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="4978" e_stop="5072" e_length="95"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.848">
            <gDNA_intron_boundary i_start="5073" i_stop="7518" i_length="2446"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="7519" e_stop="7595" e_length="77"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="7596" i_stop="7892" i_length="297"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="7893" e_stop="8375" e_length="483"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4614" stop="4711"/>
              <exon start="4813" stop="4900"/>
              <exon start="4978" stop="5072"/>
              <exon start="7519" stop="7595"/>
              <exon start="7893" stop="8375"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585399" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAAGTTTCCAGACGCAGCTTGATTGGGGGTAGGGCTGGAAGATATAGGCGCGAAGCTTCAATCAGATTATCGGGTTTTCTTAGCTCAACAAAAATAT : GAGGCATTCGGTGAATCGTCCACCAACACCTGATACACGGGATGAACAAGAAAAGGAGCCTACACTTAAGGAAATTATCAACATTAAG : TTGATTGAAAGTGGGGAAAAGGAAAGATTAATGGAGCTTTTGAGGGAAAGGCTTGTTGAGTCTGGGTGGAAGGATGAAATGAAAGCTCTTTGTAG : GGAGTATATAAAGAAGAAAGGACGGAACAATATAACCATTGACGACCTTGTACATGTGATTACCCCAAAAGGCAGAG : CTTCAATTCCTGATCCGATCAAAGCTGAATTGCTTCAGAGAATTCGTACATTTCTTGTTTCTCCCACTCTCTGATTCAACAGCTTCATGCATGAAGAGGGTAGCAATATAGGTGAAGATGTGGCATTATGTTTGACTCATTTCATCTTGGAACATCGTTTGTCTAGATTATGACCACGATGAGGAAACCAGGAGCCATATGAGAAGATGTGCTATTGGCAGTTTGCTTGTACCAAGTTTCGTAGAACTGTATAAATTGCTACTTGGTGGTTTTATGTTGATGGCCCAGGTTCAGAGTTTGATCACTACATGACCCTCACCTTTTAGTGGCTAAACTATCTGTTATCTGGTTGTCCCTAGTTTTAAGAAAGTGTAGTTTTATTGAGATGCCTGCTCCTCAGCAGAATCCCTGCTCTTCTTTTGTGTGTACTTTACTCATGTGTTCTTCGTATTAGTGAAAGCCAGTTGGTTGTGTGTTCTCTCT</gDNA_template>
            <first_frame> R  S  F  Q  T  Q  L  D  W  G  *  G  W  K  I  *  A  R  S  F  N  Q  I  I  G  F  S  *  L  N  K  N  M :   R  H  S  V  N  R  P  P  T  P  D  T  R  D  E  Q  E  K  E  P  T  L  K  E  I  I  N  I  K  :  L  I  E  S  G  E  K  E  R  L  M  E  L  L  R  E  R  L  V  E  S  G  W  K  D  E  M  K  A  L  C  R :   E  Y  I  K  K  K  G  R  N  N  I  T  I  D  D  L  V  H  V  I  T  P  K  G  R   : A  S  I  P  D  P  I  K  A  E  L  L  Q  R  I  R  T  F  L  V  S  P  T  L  *  F  N  S  F  M  H  E  E  G  S  N  I  G  E  D  V  A  L  C  L  T  H  F  I  L  E  H  R  L  S  R  L  *  P  R  *  G  N  Q  E  P  Y  E  K  M  C  Y  W  Q  F  A  C  T  K  F  R  R  T  V  *  I  A  T  W  W  F  Y  V  D  G  P  G  S  E  F  D  H  Y  M  T  L  T  F  *  W  L  N  Y  L  L  S  G  C  P  *  F  *  E  S  V  V  L  L  R  C  L  L  L  S  R  I  P  A  L  L  L  C  V  L  Y  S  C  V  L  R  I  S  E  S  Q  L  V  V  C  S  L  </first_frame>
            <second_frame>  E  V  S  R  R  S  L  I  G  G  R  A  G  R  Y  R  R  E  A  S  I  R  L  S  G  F  L  S  S  T  K  I   : *  G  I  R  *  I  V  H  Q  H  L  I  H  G  M  N  K  K  R  S  L  H  L  R  K  L  S  T  L  S :   *  L  K  V  G  K  R  K  D  *  W  S  F  *  G  K  G  L  L  S  L  G  G  R  M  K  *  K  L  F  V   : G  S  I  *  R  R  K  D  G  T  I  *  P  L  T  T  L  Y  M  *  L  P  Q  K  A  E  :  L  Q  F  L  I  R  S  K  L  N  C  F  R  E  F  V  H  F  L  F  L  P  L  S  D  S  T  A  S  C  M  K  R  V  A  I  *  V  K  M  W  H  Y  V  *  L  I  S  S  W  N  I  V  C  L  D  Y  D  H  D  E  E  T  R  S  H  M  R  R  C  A  I  G  S  L  L  V  P  S  F  V  E  L  Y  K  L  L  L  G  G  F  M  L  M  A  Q  V  Q  S  L  I  T  T  *  P  S  P  F  S  G  *  T  I  C  Y  L  V  V  P  S  F  K  K  V  *  F  Y  *  D  A  C  S  S  A  E  S  L  L  F  F  C  V  Y  F  T  H  V  F  F  V  L  V  K  A  S  W  L  C  V  L  S </second_frame>
            <third_frame>   K  F  P  D  A  A  *  L  G  V  G  L  E  D  I  G  A  K  L  Q  S  D  Y  R  V  F  L  A  Q  Q  K  Y  :  E  A  F  G  E  S  S  T  N  T  *  Y  T  G  *  T  R  K  G  A  Y  T  *  G  N  Y  Q  H  *   : V  D  *  K  W  G  K  G  K  I  N  G  A  F  E  G  K  A  C  *  V  W  V  E  G  *  N  E  S  S  L  *  :  G  V  Y  K  E  E  R  T  E  Q  Y  N  H  *  R  P  C  T  C  D  Y  P  K  R  Q  S :   F  N  S  *  S  D  Q  S  *  I  A  S  E  N  S  Y  I  S  C  F  S  H  S  L  I  Q  Q  L  H  A  *  R  G  *  Q  Y  R  *  R  C  G  I  M  F  D  S  F  H  L  G  T  S  F  V  *  I  M  T  T  M  R  K  P  G  A  I  *  E  D  V  L  L  A  V  C  L  Y  Q  V  S  *  N  C  I  N  C  Y  L  V  V  L  C  *  W  P  R  F  R  V  *  S  L  H  D  P  H  L  L  V  A  K  L  S  V  I  W  L  S  L  V  L  R  K  C  S  F  I  E  M  P  A  P  Q  Q  N  P  C  S  S  F  V  C  T  L  L  M  C  S  S  Y  *  *  K  P  V  G  C  V  F  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4698" stop="4711"/>
                    <exon start="4813" stop="4900"/>
                    <exon start="4978" stop="5072"/>
                    <exon start="7519" stop="7595"/>
                    <exon start="7893" stop="7966"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>345</number_coding_nucleotides>
                  <number_encoded_amino_acids>115</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LNKNMRHSVNRPPTPDTRDEQEKEPTLKEIINIKLIESGEKERLMELLRERLVESGWKDEMKALCREYIKKKGRNNITIDDLVHVITPKGRASIPDPIKAELLQRIRTFLVSPTL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="17949" PGL_stop="24071"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17949" e_stop="18127"/>
            <exon e_start="18282" e_stop="18360"/>
            <exon e_start="18576" e_stop="18745"/>
            <exon e_start="18830" e_stop="18877"/>
            <exon e_start="23273" e_stop="23359"/>
            <exon e_start="23704" e_stop="24071"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="0.989"/>
          <exon-intron don_prob="0.785" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.916" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="17949" e_stop="18127" e_length="179"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="18128" i_stop="18281" i_length="154"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="18282" e_stop="18360" e_length="79"/>
          </exon>
          <intron i_serial="2" don_prob="0.785" acc_prob="1.000">
            <gDNA_intron_boundary i_start="18361" i_stop="18575" i_length="215"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="18576" e_stop="18745" e_length="170"/>
          </exon>
          <intron i_serial="3" don_prob="0.916" acc_prob="0.989">
            <gDNA_intron_boundary i_start="18746" i_stop="18829" i_length="84"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="18830" e_stop="18877" e_length="48"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="18878" i_stop="23272" i_length="4395"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="23273" e_stop="23359" e_length="87"/>
          </exon>
          <intron i_serial="5" don_prob="0.978" acc_prob="0.992">
            <gDNA_intron_boundary i_start="23360" i_stop="23703" i_length="344"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="23704" e_stop="24071" e_length="368"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17949" stop="18127"/>
              <exon start="18282" stop="18360"/>
              <exon start="18576" stop="18745"/>
              <exon start="18830" stop="18877"/>
              <exon start="23273" stop="23359"/>
              <exon start="23704" stop="24071"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573750" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAATAGACCGACTGATAAAAACTAAGCAAGGGCAAAAGGATTTAGCTAGAACCCTAAACTGATCGAATCGAAGCAACTCAACAATGGAGATGCAAAGCGAATTCGATCGTCTCCTTTTCTTCGAACACGCTCGGAAGAGTGCTGAAACCGCCTATGCTCAGAATCCCCTAGATGCTGAT : AACTTGACGAGGTGGGGAGGTGCATTGCTGGAATTATCACAGTTTCAGCCCGTAGCTGAATCGAAACAAATGATTTCTG : ATGCAACATCAAAGTTGGAGGAGGCATTGACAGTGAACCCTGAAAAGCATGATGCGCTTTGGTGTTTGGGAAATGCTCATACATCACATGCTTTTTTAACTCCTGATATGGATGAGGCTAAGGTTTACTTTGAAAAAGCAACTCAGTGCTTTCAACAGGCATTTGATGCG : GATCCCTCAAATGACCTTTACCGCAAATCTCTGGAAGTTACTGCTAAG : GCTCCAGAATTGCACATGGAAATCCACAGACATGGTCCCATGCAACAACCTATGGCAGCAGAACCTTCAACATCGACAAGCACAAAG : AGTTCAAAAAAGAAGAAGAGCAGTGATCTCAAGTATGACATTTTTGGGTGGGTCATACTTGCCGTTGGCATTGTTGCATGGGTGGGATTTGCAAAATCTAATATGCCTCCACCACCACCACCGCATCCACAGTGAAACCCATAATACAGCTTAGCTTTACTGGTGAAGATACTCTATTAGAGTTTTTCCTTTTGCATAAACAGGACCCTAGGCATTAATGCCTGTCATTTAGCTAGTTACTGAAACTTTATAACTTTCTGGTGAAAACTTTGAAGACTTTTTTTCTGTTGTAATAGATTAAATAAGACTTTTTTTCTGTTGTGATAGATCAAATAAGACTTTTTCTTTTAATCTCGGGATATTTTTCA</gDNA_template>
            <first_frame> *  *  T  D  *  *  K  L  S  K  G  K  R  I  *  L  E  P  *  T  D  R  I  E  A  T  Q  Q  W  R  C  K  A  N  S  I  V  S  F  S  S  N  T  L  G  R  V  L  K  P  P  M  L  R  I  P  *  M  L  I :   T  *  R  G  G  E  V  H  C  W  N  Y  H  S  F  S  P  *  L  N  R  N  K  *  F  L  :  M  Q  H  Q  S  W  R  R  H  *  Q  *  T  L  K  S  M  M  R  F  G  V  W  E  M  L  I  H  H  M  L  F  *  L  L  I  W  M  R  L  R  F  T  L  K  K  Q  L  S  A  F  N  R  H  L  M  R :   I  P  Q  M  T  F  T  A  N  L  W  K  L  L  L  R :   L  Q  N  C  T  W  K  S  T  D  M  V  P  C  N  N  L  W  Q  Q  N  L  Q  H  R  Q  A  Q  R :   V  Q  K  R  R  R  A  V  I  S  S  M  T  F  L  G  G  S  Y  L  P  L  A  L  L  H  G  W  D  L  Q  N  L  I  C  L  H  H  H  H  R  I  H  S  E  T  H  N  T  A  *  L  Y  W  *  R  Y  S  I  R  V  F  P  F  A  *  T  G  P  *  A  L  M  P  V  I  *  L  V  T  E  T  L  *  L  S  G  E  N  F  E  D  F  F  S  V  V  I  D  *  I  R  L  F  F  C  C  D  R  S  N  K  T  F  S  F  N  L  G  I  F  F  </first_frame>
            <second_frame>  N  R  P  T  D  K  N  *  A  R  A  K  G  F  S  *  N  P  K  L  I  E  S  K  Q  L  N  N  G  D  A  K  R  I  R  S  S  P  F  L  R  T  R  S  E  E  C  *  N  R  L  C  S  E  S  P  R  C  *   : *  L  D  E  V  G  R  C  I  A  G  I  I  T  V  S  A  R  S  *  I  E  T  N  D  F  * :   C  N  I  K  V  G  G  G  I  D  S  E  P  *  K  A  *  C  A  L  V  F  G  K  C  S  Y  I  T  C  F  F  N  S  *  Y  G  *  G  *  G  L  L  *  K  S  N  S  V  L  S  T  G  I  *  C   : G  S  L  K  *  P  L  P  Q  I  S  G  S  Y  C  *   : G  S  R  I  A  H  G  N  P  Q  T  W  S  H  A  T  T  Y  G  S  R  T  F  N  I  D  K  H  K   : E  F  K  K  E  E  E  Q  *  S  Q  V  *  H  F  W  V  G  H  T  C  R  W  H  C  C  M  G  G  I  C  K  I  *  Y  A  S  T  T  T  T  A  S  T  V  K  P  I  I  Q  L  S  F  T  G  E  D  T  L  L  E  F  F  L  L  H  K  Q  D  P  R  H  *  C  L  S  F  S  *  L  L  K  L  Y  N  F  L  V  K  T  L  K  T  F  F  L  L  *  *  I  K  *  D  F  F  S  V  V  I  D  Q  I  R  L  F  L  L  I  S  G  Y  F  S </second_frame>
            <third_frame>   I  D  R  L  I  K  T  K  Q  G  Q  K  D  L  A  R  T  L  N  *  S  N  R  S  N  S  T  M  E  M  Q  S  E  F  D  R  L  L  F  F  E  H  A  R  K  S  A  E  T  A  Y  A  Q  N  P  L  D  A  D  :  N  L  T  R  W  G  G  A  L  L  E  L  S  Q  F  Q  P  V  A  E  S  K  Q  M  I  S   : D  A  T  S  K  L  E  E  A  L  T  V  N  P  E  K  H  D  A  L  W  C  L  G  N  A  H  T  S  H  A  F  L  T  P  D  M  D  E  A  K  V  Y  F  E  K  A  T  Q  C  F  Q  Q  A  F  D  A  :  D  P  S  N  D  L  Y  R  K  S  L  E  V  T  A  K  :  A  P  E  L  H  M  E  I  H  R  H  G  P  M  Q  Q  P  M  A  A  E  P  S  T  S  T  S  T  K  :  S  S  K  K  K  K  S  S  D  L  K  Y  D  I  F  G  W  V  I  L  A  V  G  I  V  A  W  V  G  F  A  K  S  N  M  P  P  P  P  P  P  H  P  Q  *  N  P  *  Y  S  L  A  L  L  V  K  I  L  Y  *  S  F  S  F  C  I  N  R  T  L  G  I  N  A  C  H  L  A  S  Y  *  N  F  I  T  F  W  *  K  L  *  R  L  F  F  C  C  N  R  L  N  K  T  F  F  L  L  *  *  I  K  *  D  F  F  F  *  S  R  D  I  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18011" stop="18127"/>
                    <exon start="18282" stop="18360"/>
                    <exon start="18576" stop="18745"/>
                    <exon start="18830" stop="18877"/>
                    <exon start="23273" stop="23359"/>
                    <exon start="23704" stop="23838"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>633</number_coding_nucleotides>
                  <number_encoded_amino_acids>211</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SNRSNSTMEMQSEFDRLLFFEHARKSAETAYAQNPLDADNLTRWGGALLELSQFQPVAESKQMISDATSKLEEALTVNPEKHDALWCLGNAHTSHAFLTPDMDEAKVYFEKATQCFQQAFDADPSNDLYRKSLEVTAKAPELHMEIHRHGPMQQPMAAEPSTSTSTKSSKKKKSSDLKYDIFGWVILAVGIVAWVGFAKSNMPPPPPPHPQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="27903" PGL_stop="25307"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="27903" e_stop="27388"/>
            <exon e_start="26056" e_stop="25307"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.980" acc_prob="0.662" e_score="0.998"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="27903" e_stop="27388" e_length="516"/>
          </exon>
          <intron i_serial="1" don_prob="0.980" acc_prob="0.662">
            <gDNA_intron_boundary i_start="27387" i_stop="26057" i_length="1331"/>
          </intron>
          <exon e_serial="2" e_score="0.991">
            <gDNA_exon_boundary e_start="26056" e_stop="25307" e_length="750"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27903" stop="27388"/>
              <exon start="26056" stop="25307"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576281" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACGAATTAAGAAAGGAGGCTTTAGCTTATACCTAGCTGTGCTCATCTGATCTCTTCTCATCAAAAAAAGAGAGTAATCAAACGCAACGTATCCCCACACAGCCCAACTTCATTCATTGATAAAACAAGAATTTTGAAGTTGAAGATATAAAAAATCTGAAGCTCTCGATCTGAATCCATGACAATTTATTTGAAACAAAGATTTGGCTATTTTTTTCATAACAGATGGCTGGTGTTCGTTGCTGCAATGTGGATTCAAACTTGTGCGGGACTTGGATACTTATTCGGCAGTATTTCTCCAGTAATTAAAATCTCTCTGAATTACAATCAGAAACAGATTGCTCGATTGGGCGTGGCTAAAGATTTGGGTGATAGTGTTGGATTTTTAGCTGCTACTTTGTGTGAAATTTTGCCTTTATGGGCTGCACTTCTTGTGGGTGCTATTCAGAATTTTATTGGATATGGTTGGCTTTGGCTTATTGTGACTCGAAGAACTGAACCTTTGCCATTATGGGCT : ATGTGTATTCTTATATTTATAGGAACAAATGGTGAAACCTACTTCAACACAGCAGCTTTAGTCTCTTGTGTACAAAATTTCCCGAAAAGTCGCGGTCCTGTGGTTGGGATTCTTAAGGGATTTGCTGGCTTAGGTGGTGCTATCATAACTCAGATATATGCAGTAATTCATTCCCCGGATCACGCTTCACTTATATTTGTGATTGCGGTTGGACCAGCAATGGTGATTATAGCTCTCATGTTTATAATCAGGCCTGTTGGAGGCCATAGACAAGTCAGGCCTTCTGATGGTTTAAGTTTTTCGTTTGTTTACAGTATATGCCTCATTTTAGCTTCTTACTTATTGGGAGTTATGATTGTTGAAGACTTAGTCGATGTTAGCCAAAATGCTATTATTATCCTCACATCTATTCTATTTGTCATCTTGATTATCCCTATTGTGATCCCTATCTATTTGAGTTTCACTCAAGAGCCAAGAGTAGTACCAGAAGAAGAGGCACTTGTATCTCGGTCAGGTGATCAAGGTCCTGGCAGATCAGAACACTACGATGGTCAAGAAATTATATTTAGTGAGGTTGAAGAAGAGAAACCAAAGGGAGTAGACTTGCTTCCTGCTTTAGAAAGGCAGAAAAGGATCGCGCAGTTACAAGTGAGACTAGCACAAGCAGCTGCAGAAGGAGCTGTGAGGGTGAAAAGGAGACGAGGTCCTCGTAGGGGAGAGGACTTTACTTTAGTCCAGGCTTTAATAAAA</gDNA_template>
            <first_frame> T  N  *  E  R  R  L  *  L  I  P  S  C  A  H  L  I  S  S  H  Q  K  K  R  V  I  K  R  N  V  S  P  H  S  P  T  S  F  I  D  K  T  R  I  L  K  L  K  I  *  K  I  *  S  S  R  S  E  S  M  T  I  Y  L  K  Q  R  F  G  Y  F  F  H  N  R  W  L  V  F  V  A  A  M  W  I  Q  T  C  A  G  L  G  Y  L  F  G  S  I  S  P  V  I  K  I  S  L  N  Y  N  Q  K  Q  I  A  R  L  G  V  A  K  D  L  G  D  S  V  G  F  L  A  A  T  L  C  E  I  L  P  L  W  A  A  L  L  V  G  A  I  Q  N  F  I  G  Y  G  W  L  W  L  I  V  T  R  R  T  E  P  L  P  L  W  A  :  M  C  I  L  I  F  I  G  T  N  G  E  T  Y  F  N  T  A  A  L  V  S  C  V  Q  N  F  P  K  S  R  G  P  V  V  G  I  L  K  G  F  A  G  L  G  G  A  I  I  T  Q  I  Y  A  V  I  H  S  P  D  H  A  S  L  I  F  V  I  A  V  G  P  A  M  V  I  I  A  L  M  F  I  I  R  P  V  G  G  H  R  Q  V  R  P  S  D  G  L  S  F  S  F  V  Y  S  I  C  L  I  L  A  S  Y  L  L  G  V  M  I  V  E  D  L  V  D  V  S  Q  N  A  I  I  I  L  T  S  I  L  F  V  I  L  I  I  P  I  V  I  P  I  Y  L  S  F  T  Q  E  P  R  V  V  P  E  E  E  A  L  V  S  R  S  G  D  Q  G  P  G  R  S  E  H  Y  D  G  Q  E  I  I  F  S  E  V  E  E  E  K  P  K  G  V  D  L  L  P  A  L  E  R  Q  K  R  I  A  Q  L  Q  V  R  L  A  Q  A  A  A  E  G  A  V  R  V  K  R  R  R  G  P  R  R  G  E  D  F  T  L  V  Q  A  L  I  K </first_frame>
            <second_frame>  R  I  K  K  G  G  F  S  L  Y  L  A  V  L  I  *  S  L  L  I  K  K  R  E  *  S  N  A  T  Y  P  H  T  A  Q  L  H  S  L  I  K  Q  E  F  *  S  *  R  Y  K  K  S  E  A  L  D  L  N  P  *  Q  F  I  *  N  K  D  L  A  I  F  F  I  T  D  G  W  C  S  L  L  Q  C  G  F  K  L  V  R  D  L  D  T  Y  S  A  V  F  L  Q  *  L  K  S  L  *  I  T  I  R  N  R  L  L  D  W  A  W  L  K  I  W  V  I  V  L  D  F  *  L  L  L  C  V  K  F  C  L  Y  G  L  H  F  L  W  V  L  F  R  I  L  L  D  M  V  G  F  G  L  L  *  L  E  E  L  N  L  C  H  Y  G  L :   C  V  F  L  Y  L  *  E  Q  M  V  K  P  T  S  T  Q  Q  L  *  S  L  V  Y  K  I  S  R  K  V  A  V  L  W  L  G  F  L  R  D  L  L  A  *  V  V  L  S  *  L  R  Y  M  Q  *  F  I  P  R  I  T  L  H  L  Y  L  *  L  R  L  D  Q  Q  W  *  L  *  L  S  C  L  *  S  G  L  L  E  A  I  D  K  S  G  L  L  M  V  *  V  F  R  L  F  T  V  Y  A  S  F  *  L  L  T  Y  W  E  L  *  L  L  K  T  *  S  M  L  A  K  M  L  L  L  S  S  H  L  F  Y  L  S  S  *  L  S  L  L  *  S  L  S  I  *  V  S  L  K  S  Q  E  *  Y  Q  K  K  R  H  L  Y  L  G  Q  V  I  K  V  L  A  D  Q  N  T  T  M  V  K  K  L  Y  L  V  R  L  K  K  R  N  Q  R  E  *  T  C  F  L  L  *  K  G  R  K  G  S  R  S  Y  K  *  D  *  H  K  Q  L  Q  K  E  L  *  G  *  K  G  D  E  V  L  V  G  E  R  T  L  L  *  S  R  L  *  *   </second_frame>
            <third_frame>   E  L  R  K  E  A  L  A  Y  T  *  L  C  S  S  D  L  F  S  S  K  K  E  S  N  Q  T  Q  R  I  P  T  Q  P  N  F  I  H  *  *  N  K  N  F  E  V  E  D  I  K  N  L  K  L  S  I  *  I  H  D  N  L  F  E  T  K  I  W  L  F  F  S  *  Q  M  A  G  V  R  C  C  N  V  D  S  N  L  C  G  T  W  I  L  I  R  Q  Y  F  S  S  N  *  N  L  S  E  L  Q  S  E  T  D  C  S  I  G  R  G  *  R  F  G  *  *  C  W  I  F  S  C  Y  F  V  *  N  F  A  F  M  G  C  T  S  C  G  C  Y  S  E  F  Y  W  I  W  L  A  L  A  Y  C  D  S  K  N  *  T  F  A  I  M  G   : Y  V  Y  S  Y  I  Y  R  N  K  W  *  N  L  L  Q  H  S  S  F  S  L  L  C  T  K  F  P  E  K  S  R  S  C  G  W  D  S  *  G  I  C  W  L  R  W  C  Y  H  N  S  D  I  C  S  N  S  F  P  G  S  R  F  T  Y  I  C  D  C  G  W  T  S  N  G  D  Y  S  S  H  V  Y  N  Q  A  C  W  R  P  *  T  S  Q  A  F  *  W  F  K  F  F  V  C  L  Q  Y  M  P  H  F  S  F  L  L  I  G  S  Y  D  C  *  R  L  S  R  C  *  P  K  C  Y  Y  Y  P  H  I  Y  S  I  C  H  L  D  Y  P  Y  C  D  P  Y  L  F  E  F  H  S  R  A  K  S  S  T  R  R  R  G  T  C  I  S  V  R  *  S  R  S  W  Q  I  R  T  L  R  W  S  R  N  Y  I  *  *  G  *  R  R  E  T  K  G  S  R  L  A  S  C  F  R  K  A  E  K  D  R  A  V  T  S  E  T  S  T  S  S  C  R  R  S  C  E  G  E  K  E  T  R  S  S  *  G  R  G  L  Y  F  S  P  G  F  N  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="27744" stop="27388"/>
                    <exon start="26056" stop="25307"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1107</number_coding_nucleotides>
                  <number_encoded_amino_acids>369</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSRSESMTIYLKQRFGYFFHNRWLVFVAAMWIQTCAGLGYLFGSISPVIKISLNYNQKQIARLGVAKDLGDSVGFLAATLCEILPLWAALLVGAIQNFIGYGWLWLIVTRRTEPLPLWAMCILIFIGTNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAIITQIYAVIHSPDHASLIFVIAVGPAMVIIALMFIIRPVGGHRQVRPSDGLSFSFVYSICLILASYLLGVMIVEDLVDVSQNAIIILTSILFVILIIPIVIPIYLSFTQEPRVVPEEEALVSRSGDQGPGRSEHYDGQEIIFSEVEEEKPKGVDLLPALERQKRIAQLQVRLAQAAAEGAVRVKRRRGPRRGEDFTLVQALIK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="28339" PGL_stop="29139"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28339" e_stop="29139"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.971"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.971">
            <gDNA_exon_boundary e_start="28339" e_stop="29139" e_length="801"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28339" stop="29139"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567069" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACACGTTATCAGCACGAAGTTGCTACTTGCAAAGGTATTATATATAAATATTTTTATTTGATTCACATATTCTCTCATAATTTCATTATGTCGAATTTATCCAAACTTGAGTTTGTGGCATTAGATATTTCTGGAAAGAATTATCTTTCATGGGTACTCGATGCTGAGATTCACTTGGCTGCTAAAGGTCTTGATGCCACTATTACTCAGGGAAATGAAGCATCGAGTCAAGATAAGGCGAAAGCTATGATTTTCCTTCGTCATCATCTTGATGAGGGCCTGAAGATTGAATATCTGACGGTGAAAGATCCACTTGAATTGTGGACTGATTTAAAGGGGAGATATGACCACCTAAAGGCAACAGTGTTGCCAAGAGCTCGTTATGAGTGGATGCATTTACGGTTTCAAGATTTTAAGACCGTAATTGAATACAACTCTGCTGTATTCAGGATAACCTCCCAGTTAAAATTATGTGGGGAGACTATAAAAGATGAGGACATGTTGGAAAAGACACTTACTACTTTCCATGCCTCAAATGTGATATTGCAGCAACAATATCATGAAAAGGGTTTTCAGAAATATTCTGAACTAATTTCATGTCTTTTGGTGGCTGAGCAACATAATGCTCTTTTAATGAAAAATCATGAAGCTCGTCCCACTGGAGCTGCTCCATTATCGGAGGCAAATGTAGTGGAAGCACGTGATCAATCTGAAGTAAAAAGAGATGATCATCGGGGCTATAATAATGCACGGGGACGTGACAAAAATAAAAGATGATACACTAATCGTCAAGGTGGTGG</gDNA_template>
            <first_frame> N  T  L  S  A  R  S  C  Y  L  Q  R  Y  Y  I  *  I  F  L  F  D  S  H  I  L  S  *  F  H  Y  V  E  F  I  Q  T  *  V  C  G  I  R  Y  F  W  K  E  L  S  F  M  G  T  R  C  *  D  S  L  G  C  *  R  S  *  C  H  Y  Y  S  G  K  *  S  I  E  S  R  *  G  E  S  Y  D  F  P  S  S  S  S  *  *  G  P  E  D  *  I  S  D  G  E  R  S  T  *  I  V  D  *  F  K  G  E  I  *  P  P  K  G  N  S  V  A  K  S  S  L  *  V  D  A  F  T  V  S  R  F  *  D  R  N  *  I  Q  L  C  C  I  Q  D  N  L  P  V  K  I  M  W  G  D  Y  K  R  *  G  H  V  G  K  D  T  Y  Y  F  P  C  L  K  C  D  I  A  A  T  I  S  *  K  G  F  S  E  I  F  *  T  N  F  M  S  F  G  G  *  A  T  *  C  S  F  N  E  K  S  *  S  S  S  H  W  S  C  S  I  I  G  G  K  C  S  G  S  T  *  S  I  *  S  K  K  R  *  S  S  G  L  *  *  C  T  G  T  *  Q  K  *  K  M  I  H  *  S  S  R  W  W </first_frame>
            <second_frame>  T  R  Y  Q  H  E  V  A  T  C  K  G  I  I  Y  K  Y  F  Y  L  I  H  I  F  S  H  N  F  I  M  S  N  L  S  K  L  E  F  V  A  L  D  I  S  G  K  N  Y  L  S  W  V  L  D  A  E  I  H  L  A  A  K  G  L  D  A  T  I  T  Q  G  N  E  A  S  S  Q  D  K  A  K  A  M  I  F  L  R  H  H  L  D  E  G  L  K  I  E  Y  L  T  V  K  D  P  L  E  L  W  T  D  L  K  G  R  Y  D  H  L  K  A  T  V  L  P  R  A  R  Y  E  W  M  H  L  R  F  Q  D  F  K  T  V  I  E  Y  N  S  A  V  F  R  I  T  S  Q  L  K  L  C  G  E  T  I  K  D  E  D  M  L  E  K  T  L  T  T  F  H  A  S  N  V  I  L  Q  Q  Q  Y  H  E  K  G  F  Q  K  Y  S  E  L  I  S  C  L  L  V  A  E  Q  H  N  A  L  L  M  K  N  H  E  A  R  P  T  G  A  A  P  L  S  E  A  N  V  V  E  A  R  D  Q  S  E  V  K  R  D  D  H  R  G  Y  N  N  A  R  G  R  D  K  N  K  R  *  Y  T  N  R  Q  G  G   </second_frame>
            <third_frame>   H  V  I  S  T  K  L  L  L  A  K  V  L  Y  I  N  I  F  I  *  F  T  Y  S  L  I  I  S  L  C  R  I  Y  P  N  L  S  L  W  H  *  I  F  L  E  R  I  I  F  H  G  Y  S  M  L  R  F  T  W  L  L  K  V  L  M  P  L  L  L  R  E  M  K  H  R  V  K  I  R  R  K  L  *  F  S  F  V  I  I  L  M  R  A  *  R  L  N  I  *  R  *  K  I  H  L  N  C  G  L  I  *  R  G  D  M  T  T  *  R  Q  Q  C  C  Q  E  L  V  M  S  G  C  I  Y  G  F  K  I  L  R  P  *  L  N  T  T  L  L  Y  S  G  *  P  P  S  *  N  Y  V  G  R  L  *  K  M  R  T  C  W  K  R  H  L  L  L  S  M  P  Q  M  *  Y  C  S  N  N  I  M  K  R  V  F  R  N  I  L  N  *  F  H  V  F  W  W  L  S  N  I  M  L  F  *  *  K  I  M  K  L  V  P  L  E  L  L  H  Y  R  R  Q  M  *  W  K  H  V  I  N  L  K  *  K  E  M  I  I  G  A  I  I  M  H  G  D  V  T  K  I  K  D  D  T  L  I  V  K  V  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28340" stop="29116"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>774</number_coding_nucleotides>
                  <number_encoded_amino_acids>258</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TRYQHEVATCKGIIYKYFYLIHIFSHNFIMSNLSKLEFVALDISGKNYLSWVLDAEIHLAAKGLDATITQGNEASSQDKAKAMIFLRHHLDEGLKIEYLTVKDPLELWTDLKGRYDHLKATVLPRARYEWMHLRFQDFKTVIEYNSAVFRITSQLKLCGETIKDEDMLEKTLTTFHASNVILQQQYHEKGFQKYSELISCLLVAEQHNALLMKNHEARPTGAAPLSEANVVEARDQSEVKRDDHRGYNNARGRDKNKR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="29638" PGL_stop="30183"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29638" e_stop="30183"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.901"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.901">
            <gDNA_exon_boundary e_start="29638" e_stop="30183" e_length="546"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29638" stop="30183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589180" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29759" stop="30140"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589179" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAATCCCCAGTTGACAGTTGGATTCAAGATGAGTAATGGAGATGTATGCCTTCTTGATAATGCTACAACGCATACAATATTAAAAGAAAAGAAATACTTTTCTAATTTGGTTATGAAAATGGCATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGCATTTTCTTCTGGGTTGTACTATACAAGTATAAGTATAGTTGAATCACATGCCATAGTAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATGACCGGTTGGGCCATCCTGGATTTAATATGATGCGCAAAATCATTGAGAATTCACATGGACACACCTT</gDNA_template>
            <first_frame> K  S  P  V  D  S  W  I  Q  D  E  *  W  R  C  M  P  S  *  *  C  Y  N  A  Y  N  I  K  R  K  E  I  L  F  *  F  G  Y  E  N  G  I  C  Q  H  N  I  R  *  Y  K  I  N  *  G  L  W  K  S  D  L  I  T  T  W  R  D  N  I  K  H  *  *  C  I  I  L  *  *  V  S  K  K  L  I  K  F  Q  S  Y  S  P  K  W  L  S  C  *  D  G  *  *  R  K  G  *  I  P  L  H  Y  Y  N  *  C  *  E  E  N  C  A  *  K  I  T  C  I  F  F  W  V  V  L  Y  K  Y  K  Y  S  *  I  T  C  H  S  K  Q  K  V  Y  *  F  *  *  F  Y  H  L  A  *  P  V  G  P  S  W  I  *  Y  D  A  Q  N  H  *  E  F  T  W  T  H  L </first_frame>
            <second_frame>  N  P  Q  L  T  V  G  F  K  M  S  N  G  D  V  C  L  L  D  N  A  T  T  H  T  I  L  K  E  K  K  Y  F  S  N  L  V  M  K  M  A  Y  V  N  T  I  S  G  S  T  K  L  I  E  G  S  G  R  A  T  L  L  L  P  G  G  T  I  L  S  I  D  N  A  L  Y  C  S  K  S  Q  R  N  L  L  S  F  K  V  I  R  Q  N  G  Y  H  V  E  T  A  N  E  G  K  V  E  Y  L  Y  I  T  T  I  N  V  E  K  K  I  V  H  E  K  L  P  A  F  S  S  G  L  Y  Y  T  S  I  S  I  V  E  S  H  A  I  V  N  K  R  F  T  N  F  N  D  F  I  I  W  H  D  R  L  G  H  P  G  F  N  M  M  R  K  I  I  E  N  S  H  G  H  T   </second_frame>
            <third_frame>   I  P  S  *  Q  L  D  S  R  *  V  M  E  M  Y  A  F  L  I  M  L  Q  R  I  Q  Y  *  K  K  R  N  T  F  L  I  W  L  *  K  W  H  M  S  T  Q  Y  Q  V  V  Q  N  *  L  R  A  L  E  E  R  P  Y  Y  Y  L  E  G  Q  Y  *  A  L  I  M  H  Y  I  V  V  S  L  K  E  T  Y  *  V  S  K  L  F  A  K  M  A  I  M  L  R  R  L  M  K  E  R  L  N  T  F  T  L  L  Q  L  M  L  R  R  K  L  C  M  K  N  Y  L  H  F  L  L  G  C  T  I  Q  V  *  V  *  L  N  H  M  P  *  *  T  K  G  L  L  I  L  M  I  L  S  F  G  M  T  G  W  A  I  L  D  L  I  *  C  A  K  S  L  R  I  H  M  D  T  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29639" stop="30181"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>543</number_coding_nucleotides>
                  <number_encoded_amino_acids>181</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NPQLTVGFKMSNGDVCLLDNATTHTILKEKKYFSNLVMKMAYVNTISGSTKLIEGSGRATLLLPGGTILSIDNALYCSKSQRNLLSFKVIRQNGYHVETANEGKVEYLYITTINVEKKIVHEKLPAFSSGLYYTSISIVESHAIVNKRFTNFNDFIIWHDRLGHPGFNMMRKIIENSHGHT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="30951" PGL_stop="31060"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30951" e_stop="31060"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.982"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="30951" e_stop="31060" e_length="110"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30951" stop="31060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599384" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGCAAGATTTGCTGATTGTCATTTTGATGAATCAGTATATCCAACATTAGGGGGAGAACATAAGTCATTGGGAAAAGAGATAGATTGGAATTCATCATCTCTATCTCATC</gDNA_template>
            <first_frame> G  K  I  C  *  L  S  F  *  *  I  S  I  S  N  I  R  G  R  T  *  V  I  G  K  R  D  R  L  E  F  I  I  S  I  S   </first_frame>
            <second_frame>  A  R  F  A  D  C  H  F  D  E  S  V  Y  P  T  L  G  G  E  H  K  S  L  G  K  E  I  D  W  N  S  S  S  L  S  H  </second_frame>
            <third_frame>   Q  D  L  L  I  V  I  L  M  N  Q  Y  I  Q  H  *  G  E  N  I  S  H  W  E  K  R  *  I  G  I  H  H  L  Y  L  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0146O12.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="31068" PGL_stop="31190"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="31068" e_stop="31190"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.967"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.967">
            <gDNA_exon_boundary e_start="31068" e_stop="31190" e_length="123"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31068" stop="31190"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600220" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCGAACAAACCAATGTGAGCAAGAAGTTCAAAGAATAATTTATTTGCAAAACATTGCAAATCAGCTACCACATGCATTTACGAATCTTCCAAGGATTACTAAATCGCATATTCCAGCTGTTAA</gDNA_template>
            <first_frame> S  N  K  P  M  *  A  R  S  S  K  N  N  L  F  A  K  H  C  K  S  A  T  T  C  I  Y  E  S  S  K  D  Y  *  I  A  Y  S  S  C  * </first_frame>
            <second_frame>  R  T  N  Q  C  E  Q  E  V  Q  R  I  I  Y  L  Q  N  I  A  N  Q  L  P  H  A  F  T  N  L  P  R  I  T  K  S  H  I  P  A  V   </second_frame>
            <third_frame>   E  Q  T  N  V  S  K  K  F  K  E  *  F  I  C  K  T  L  Q  I  S  Y  H  M  H  L  R  I  F  Q  G  L  L  N  R  I  F  Q  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0146O12.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="33351" PGL_stop="31501"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="33351" e_stop="33309"/>
            <exon e_start="33249" e_stop="31501"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.767"/>
          <exon-only e_score="0.938"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.767">
            <gDNA_exon_boundary e_start="33351" e_stop="33309" e_length="43"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="33308" i_stop="33250" i_length="59"/>
          </intron>
          <exon e_serial="2" e_score="0.938">
            <gDNA_exon_boundary e_start="33249" e_stop="31501" e_length="1749"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33351" stop="33309"/>
              <exon start="33249" stop="31501"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586539" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACAATTCAATGGATTTATAACACTCCCCCTTGGATGTCCATAG : GAAAAAGAGTACACATATCTCATAATACGCTTTGAATGTTGCCTCATTAAAAACCTTACCAGGAAAACCCAACTTGGGACAAAACCATAGTTAAGGAAAAGAGTACAACGCGTATTTCGCTCCCCCTGATGAAAACTTTACTTGATATCTCGGAGACGGCGCATTCCAATCTTGTATCTCAACTTCTCAAATGTTGATGTTGGCAATGCCTTAGTGAATAAATCAGCAAGATTATCACTTGAACGAATTTGTTGAACTTCTATCTCACCATTTTGTTGAAGATCATGCGTGAAAAAGAACTTTGGTGAGATATGCTTTGTCTGGTCTCCTTTGATGTATCCTCCTTTCAATTGAGCTATACATGCAGCATTATCTTCATACATTGTGGTTGGTATATTCTTTTTCAAAGAAAAACCACACATTTTTCTGAATATGATGGGTCATTGATCTCAACCAGACGCACTCTCGACTTGCTTCATGGATGGCTATTATTTCTGCATGATTTGAAGAAGTGGCTACCAATGTTTGCTTCATTGATCGCCAAGATATTGCCGTGTCTCCACATGTAAACAAATAGCCTGTTTGTGATCGAGCTTTATGCTGATCTGATAAATACCCTGCATCTGCGTAACCAATCAATTCTGATTTGGATTCATTGGAATAGAATAAACCCATGTCCATGGTCCCTCGAAGATATCGAAGTATGTGTTTAACACCATTCCAATGTCTTTTTGTTGGGGAGGAACTGAATCTTGCCAGTAGACTTACTGCAAAACAGATATCTGGTCGAGTATTGTTAGCAAGGTACATTAGTGCCCCGATTGCACTAAGATAAGGAGTTTCATCACCAAGAAGCTCTTCATCATTCTCTTGAGGTCGAAATGGATCTGTATTGATGTCAAGCGATCTTACCACCATTGGAGTACTCAATGGATGTGAGTTATCCATGTAAAAACGCTTTAGTATCTTTTCTGTGTACGTTGATTGATGAACACGTATTCCATTTGACAAATTCTCAATCTGTAGACCAAGATAAAATTTTGTCTTTTCAGACACTCAACAGCTTCTAAAAGCTCTTTACGAGTTCCAATGATGTTCAAATCATCAACATACACAGCTATTATTACAAATTCAGACCCCAACCATTTACTGAAAATGCAGGGACAAATCGGGTCATTTTTGTACCCTTTCTTTAACAAATATTCACTCAAACGATTGTACCACATCCTTCCTGATTATTTCAGTCCATACAGAGATTTCTGAAGCTTTATTGAACAAGTTTCTCTTGAATCTTTGTATGTTTCAGGCACTTTAAATGCTTCAGGAATTTTCATGAAAATGTTGTGGTCCAATGAGCCATATAGATAGGCTGTGACAACGTCCATTAGACGCATTTCAAGTTTTTCATGAACTGCCAGATTTATGAGATATCTAAAGGTGATTGCATCTACCACTGGAGAATATGTCTCCATATAATCAATGCCAGGTCTTTGAGAAAAACCTTGAGCAACGAGTCGGGCCTTATATCTCATGACTTCACCTTTCTCATTTCTTTTTTCGTACAAAAACCCATTTGTACCCCACTGGCTTGATACCTTCAGGTGTTCGGATTATTGGTCCAAAAACTTCACGTTTTTCTAGTGAAGCCAATTCAGCTTGAATTGCATCCTTCCATTTTGGCCAATCATTTCTCTGTCTACATTCGTGAACAGATTTTGGCTCAAAAACTTCATCTTGTTGCATTATTTC</gDNA_template>
            <first_frame> T  I  Q  W  I  Y  N  T  P  P  W  M  S  I   : G  K  R  V  H  I  S  H  N  T  L  *  M  L  P  H  *  K  P  Y  Q  E  N  P  T  W  D  K  T  I  V  K  E  K  S  T  T  R  I  S  L  P  L  M  K  T  L  L  D  I  S  E  T  A  H  S  N  L  V  S  Q  L  L  K  C  *  C  W  Q  C  L  S  E  *  I  S  K  I  I  T  *  T  N  L  L  N  F  Y  L  T  I  L  L  K  I  M  R  E  K  E  L  W  *  D  M  L  C  L  V  S  F  D  V  S  S  F  Q  L  S  Y  T  C  S  I  I  F  I  H  C  G  W  Y  I  L  F  Q  R  K  T  T  H  F  S  E  Y  D  G  S  L  I  S  T  R  R  T  L  D  L  L  H  G  W  L  L  F  L  H  D  L  K  K  W  L  P  M  F  A  S  L  I  A  K  I  L  P  C  L  H  M  *  T  N  S  L  F  V  I  E  L  Y  A  D  L  I  N  T  L  H  L  R  N  Q  S  I  L  I  W  I  H  W  N  R  I  N  P  C  P  W  S  L  E  D  I  E  V  C  V  *  H  H  S  N  V  F  L  L  G  R  N  *  I  L  P  V  D  L  L  Q  N  R  Y  L  V  E  Y  C  *  Q  G  T  L  V  P  R  L  H  *  D  K  E  F  H  H  Q  E  A  L  H  H  S  L  E  V  E  M  D  L  Y  *  C  Q  A  I  L  P  P  L  E  Y  S  M  D  V  S  Y  P  C  K  N  A  L  V  S  F  L  C  T  L  I  D  E  H  V  F  H  L  T  N  S  Q  S  V  D  Q  D  K  I  L  S  F  Q  T  L  N  S  F  *  K  L  F  T  S  S  N  D  V  Q  I  I  N  I  H  S  Y  Y  Y  K  F  R  P  Q  P  F  T  E  N  A  G  T  N  R  V  I  F  V  P  F  L  *  Q  I  F  T  Q  T  I  V  P  H  P  S  *  L  F  Q  S  I  Q  R  F  L  K  L  Y  *  T  S  F  S  *  I  F  V  C  F  R  H  F  K  C  F  R  N  F  H  E  N  V  V  V  Q  *  A  I  *  I  G  C  D  N  V  H  *  T  H  F  K  F  F  M  N  C  Q  I  Y  E  I  S  K  G  D  C  I  Y  H  W  R  I  C  L  H  I  I  N  A  R  S  L  R  K  T  L  S  N  E  S  G  L  I  S  H  D  F  T  F  L  I  S  F  F  V  Q  K  P  I  C  T  P  L  A  *  Y  L  Q  V  F  G  L  L  V  Q  K  L  H  V  F  L  V  K  P  I  Q  L  E  L  H  P  S  I  L  A  N  H  F  S  V  Y  I  R  E  Q  I  L  A  Q  K  L  H  L  V  A  L  F  </first_frame>
            <second_frame>  Q  F  N  G  F  I  T  L  P  L  G  C  P  *  :  E  K  E  Y  T  Y  L  I  I  R  F  E  C  C  L  I  K  N  L  T  R  K  T  Q  L  G  T  K  P  *  L  R  K  R  V  Q  R  V  F  R  S  P  *  *  K  L  Y  L  I  S  R  R  R  R  I  P  I  L  Y  L  N  F  S  N  V  D  V  G  N  A  L  V  N  K  S  A  R  L  S  L  E  R  I  C  *  T  S  I  S  P  F  C  *  R  S  C  V  K  K  N  F  G  E  I  C  F  V  W  S  P  L  M  Y  P  P  F  N  *  A  I  H  A  A  L  S  S  Y  I  V  V  G  I  F  F  F  K  E  K  P  H  I  F  L  N  M  M  G  H  *  S  Q  P  D  A  L  S  T  C  F  M  D  G  Y  Y  F  C  M  I  *  R  S  G  Y  Q  C  L  L  H  *  S  P  R  Y  C  R  V  S  T  C  K  Q  I  A  C  L  *  S  S  F  M  L  I  *  *  I  P  C  I  C  V  T  N  Q  F  *  F  G  F  I  G  I  E  *  T  H  V  H  G  P  S  K  I  S  K  Y  V  F  N  T  I  P  M  S  F  C  W  G  G  T  E  S  C  Q  *  T  Y  C  K  T  D  I  W  S  S  I  V  S  K  V  H  *  C  P  D  C  T  K  I  R  S  F  I  T  K  K  L  F  I  I  L  L  R  S  K  W  I  C  I  D  V  K  R  S  Y  H  H  W  S  T  Q  W  M  *  V  I  H  V  K  T  L  *  Y  L  F  C  V  R  *  L  M  N  T  Y  S  I  *  Q  I  L  N  L  *  T  K  I  K  F  C  L  F  R  H  S  T  A  S  K  S  S  L  R  V  P  M  M  F  K  S  S  T  Y  T  A  I  I  T  N  S  D  P  N  H  L  L  K  M  Q  G  Q  I  G  S  F  L  Y  P  F  F  N  K  Y  S  L  K  R  L  Y  H  I  L  P  D  Y  F  S  P  Y  R  D  F  *  S  F  I  E  Q  V  S  L  E  S  L  Y  V  S  G  T  L  N  A  S  G  I  F  M  K  M  L  W  S  N  E  P  Y  R  *  A  V  T  T  S  I  R  R  I  S  S  F  S  *  T  A  R  F  M  R  Y  L  K  V  I  A  S  T  T  G  E  Y  V  S  I  *  S  M  P  G  L  *  E  K  P  *  A  T  S  R  A  L  Y  L  M  T  S  P  F  S  F  L  F  S  Y  K  N  P  F  V  P  H  W  L  D  T  F  R  C  S  D  Y  W  S  K  N  F  T  F  F  *  *  S  Q  F  S  L  N  C  I  L  P  F  W  P  I  I  S  L  S  T  F  V  N  R  F  W  L  K  N  F  I  L  L  H  Y  F </second_frame>
            <third_frame>   N  S  M  D  L  *  H  S  P  L  D  V  H  R :   K  K  S  T  H  I  S  *  Y  A  L  N  V  A  S  L  K  T  L  P  G  K  P  N  L  G  Q  N  H  S  *  G  K  E  Y  N  A  Y  F  A  P  P  D  E  N  F  T  *  Y  L  G  D  G  A  F  Q  S  C  I  S  T  S  Q  M  L  M  L  A  M  P  *  *  I  N  Q  Q  D  Y  H  L  N  E  F  V  E  L  L  S  H  H  F  V  E  D  H  A  *  K  R  T  L  V  R  Y  A  L  S  G  L  L  *  C  I  L  L  S  I  E  L  Y  M  Q  H  Y  L  H  T  L  W  L  V  Y  S  F  S  K  K  N  H  T  F  F  *  I  *  W  V  I  D  L  N  Q  T  H  S  R  L  A  S  W  M  A  I  I  S  A  *  F  E  E  V  A  T  N  V  C  F  I  D  R  Q  D  I  A  V  S  P  H  V  N  K  *  P  V  C  D  R  A  L  C  *  S  D  K  Y  P  A  S  A  *  P  I  N  S  D  L  D  S  L  E  *  N  K  P  M  S  M  V  P  R  R  Y  R  S  M  C  L  T  P  F  Q  C  L  F  V  G  E  E  L  N  L  A  S  R  L  T  A  K  Q  I  S  G  R  V  L  L  A  R  Y  I  S  A  P  I  A  L  R  *  G  V  S  S  P  R  S  S  S  S  F  S  *  G  R  N  G  S  V  L  M  S  S  D  L  T  T  I  G  V  L  N  G  C  E  L  S  M  *  K  R  F  S  I  F  S  V  Y  V  D  *  *  T  R  I  P  F  D  K  F  S  I  C  R  P  R  *  N  F  V  F  S  D  T  Q  Q  L  L  K  A  L  Y  E  F  Q  *  C  S  N  H  Q  H  T  Q  L  L  L  Q  I  Q  T  P  T  I  Y  *  K  C  R  D  K  S  G  H  F  C  T  L  S  L  T  N  I  H  S  N  D  C  T  T  S  F  L  I  I  S  V  H  T  E  I  S  E  A  L  L  N  K  F  L  L  N  L  C  M  F  Q  A  L  *  M  L  Q  E  F  S  *  K  C  C  G  P  M  S  H  I  D  R  L  *  Q  R  P  L  D  A  F  Q  V  F  H  E  L  P  D  L  *  D  I  *  R  *  L  H  L  P  L  E  N  M  S  P  Y  N  Q  C  Q  V  F  E  K  N  L  E  Q  R  V  G  P  Y  I  S  *  L  H  L  S  H  F  F  F  R  T  K  T  H  L  Y  P  T  G  L  I  P  S  G  V  R  I  I  G  P  K  T  S  R  F  S  S  E  A  N  S  A  *  I  A  S  F  H  F  G  Q  S  F  L  C  L  H  S  *  T  D  F  G  S  K  T  S  S  C  C  I  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32941" stop="32681"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DMLCLVSFDVSSFQLSYTCSIIFIHCGWYILFQRKTTHFSEYDGSLISTRRTLDLLHGWLLFLHDLKKWLPMFASLIAKILPCLHM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32223" stop="31987"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TKIKFCLFRHSTASKSSLRVPMMFKSSTYTAIITNSDPNHLLKMQGQIGSFLYPFFNKYSLKRLYHILPDYFSPYRDF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31861" stop="31658"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>THFKFFMNCQIYEISKGDCIYHWRICLHIINARSLRKTLSNESGLISHDFTFLISFFVQKPICTPLA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="40070" PGL_stop="42769"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40070" e_stop="40503"/>
            <exon e_start="42470" e_stop="42769"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.996" e_score="0.998"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="40070" e_stop="40503" e_length="434"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.996">
            <gDNA_intron_boundary i_start="40504" i_stop="42469" i_length="1966"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="42470" e_stop="42769" e_length="300"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40070" stop="40503"/>
              <exon start="42470" stop="42769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U564557" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAATCAGCTCAGACAATAAGAGCGCGCGGCGCAGTCATAAAAAGGGCTCTTTCAATAGCCAGTAGCGTACTGTTGGACTTGAGTTGACACACGCAAATCAGAGTGAGAAGTAGAGCGACCGATTTTCCGATTTGCTAATGGATCCCGACGCCGTAGCGAAGGCATTTGTGGACTACTACTACACCACCTTCGATACCAATCGGGCTGGACTTGCTAGCGTCTACCAGGAAAGCTCTGTACTGTCTTTTGAGGGTCAGAAGTATCAGGGGACTCAAAGTATCTCCGGTAAGCTCACCGGTCTACCTTTCCAGCAGTGCAAGCACCAGATCAACACCGTTGATTGTCAGCCCTCTGGTGCTGCCGGGGGAATGCTTGTCTTTGTCAGCGGCAATCTCAGCCTTCCAGGCGAACAACACACCCTCAAGTTCAGTCAG : ATGTTTCACTTGATTCCAACACAAGGAGGAAGTTTCTACGTGCAGAATGACATATTTCGCTTGAACTATGCTTGAAGGGTTCTGCGTTCAATTATCTCCTGGTCATATTTTCTTGATTGATTCGACAAAGATAGTATTATAGCAAGATATTGCTTCCATTTCACAGTCATTGAGAGACTATTTTTTCCTGTAATGGTTTAGTGAATTGATTGATGAACTTGGCTTCCCTCAGAGTTTAATGGAATTGAACGAGGCTTTAAGAAGATTGTTATCAAAAAATGATTTCTTGCCAAAGCATTG</gDNA_template>
            <first_frame> *  S  A  Q  T  I  R  A  R  G  A  V  I  K  R  A  L  S  I  A  S  S  V  L  L  D  L  S  *  H  T  Q  I  R  V  R  S  R  A  T  D  F  P  I  C  *  W  I  P  T  P  *  R  R  H  L  W  T  T  T  T  P  P  S  I  P  I  G  L  D  L  L  A  S  T  R  K  A  L  Y  C  L  L  R  V  R  S  I  R  G  L  K  V  S  P  V  S  S  P  V  Y  L  S  S  S  A  S  T  R  S  T  P  L  I  V  S  P  L  V  L  P  G  E  C  L  S  L  S  A  A  I  S  A  F  Q  A  N  N  T  P  S  S  S  V  R :   C  F  T  *  F  Q  H  K  E  E  V  S  T  C  R  M  T  Y  F  A  *  T  M  L  E  G  F  C  V  Q  L  S  P  G  H  I  F  L  I  D  S  T  K  I  V  L  *  Q  D  I  A  S  I  S  Q  S  L  R  D  Y  F  F  L  *  W  F  S  E  L  I  D  E  L  G  F  P  Q  S  L  M  E  L  N  E  A  L  R  R  L  L  S  K  N  D  F  L  P  K  H   </first_frame>
            <second_frame>  N  Q  L  R  Q  *  E  R  A  A  Q  S  *  K  G  L  F  Q  *  P  V  A  Y  C  W  T  *  V  D  T  R  K  S  E  *  E  V  E  R  P  I  F  R  F  A  N  G  S  R  R  R  S  E  G  I  C  G  L  L  L  H  H  L  R  Y  Q  S  G  W  T  C  *  R  L  P  G  K  L  C  T  V  F  *  G  S  E  V  S  G  D  S  K  Y  L  R  *  A  H  R  S  T  F  P  A  V  Q  A  P  D  Q  H  R  *  L  S  A  L  W  C  C  R  G  N  A  C  L  C  Q  R  Q  S  Q  P  S  R  R  T  T  H  P  Q  V  Q  S   : D  V  S  L  D  S  N  T  R  R  K  F  L  R  A  E  *  H  I  S  L  E  L  C  L  K  G  S  A  F  N  Y  L  L  V  I  F  S  *  L  I  R  Q  R  *  Y  Y  S  K  I  L  L  P  F  H  S  H  *  E  T  I  F  S  C  N  G  L  V  N  *  L  M  N  L  A  S  L  R  V  *  W  N  *  T  R  L  *  E  D  C  Y  Q  K  M  I  S  C  Q  S  I  </second_frame>
            <third_frame>   I  S  S  D  N  K  S  A  R  R  S  H  K  K  G  S  F  N  S  Q  *  R  T  V  G  L  E  L  T  H  A  N  Q  S  E  K  *  S  D  R  F  S  D  L  L  M  D  P  D  A  V  A  K  A  F  V  D  Y  Y  Y  T  T  F  D  T  N  R  A  G  L  A  S  V  Y  Q  E  S  S  V  L  S  F  E  G  Q  K  Y  Q  G  T  Q  S  I  S  G  K  L  T  G  L  P  F  Q  Q  C  K  H  Q  I  N  T  V  D  C  Q  P  S  G  A  A  G  G  M  L  V  F  V  S  G  N  L  S  L  P  G  E  Q  H  T  L  K  F  S  Q  :  M  F  H  L  I  P  T  Q  G  G  S  F  Y  V  Q  N  D  I  F  R  L  N  Y  A  *  R  V  L  R  S  I  I  S  W  S  Y  F  L  D  *  F  D  K  D  S  I  I  A  R  Y  C  F  H  F  T  V  I  E  R  L  F  F  P  V  M  V  *  *  I  D  *  *  T  W  L  P  S  E  F  N  G  I  E  R  G  F  K  K  I  V  I  K  K  *  F  L  A  K  A  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40183" stop="40503"/>
                    <exon start="42470" stop="42544"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>393</number_coding_nucleotides>
                  <number_encoded_amino_acids>131</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SDRFSDLLMDPDAVAKAFVDYYYTTFDTNRAGLASVYQESSVLSFEGQKYQGTQSISGKLTGLPFQQCKHQINTVDCQPSGAAGGMLVFVSGNLSLPGEQHTLKFSQMFHLIPTQGGSFYVQNDIFRLNYA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="52157" PGL_stop="59452"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52157" e_stop="52325"/>
            <exon e_start="52422" e_stop="52458"/>
            <exon e_start="53496" e_stop="53575"/>
            <exon e_start="53887" e_stop="53938"/>
            <exon e_start="54053" e_stop="54186"/>
            <exon e_start="54512" e_stop="54626"/>
            <exon e_start="54743" e_stop="54829"/>
            <exon e_start="54967" e_stop="55015"/>
            <exon e_start="56207" e_stop="56291"/>
            <exon e_start="57538" e_stop="57668"/>
            <exon e_start="59102" e_stop="59452"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.981" acc_prob="0.871" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.782" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.885" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.867" acc_prob="0.845" e_score="1.000"/>
          <exon-intron don_prob="0.574" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.607" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.744" acc_prob="0.988" e_score="0.992"/>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="52157" e_stop="52325" e_length="169"/>
          </exon>
          <intron i_serial="1" don_prob="0.981" acc_prob="0.871">
            <gDNA_intron_boundary i_start="52326" i_stop="52421" i_length="96"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="52422" e_stop="52458" e_length="37"/>
          </exon>
          <intron i_serial="2" don_prob="0.960" acc_prob="0.782">
            <gDNA_intron_boundary i_start="52459" i_stop="53495" i_length="1037"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="53496" e_stop="53575" e_length="80"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.885">
            <gDNA_intron_boundary i_start="53576" i_stop="53886" i_length="311"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="53887" e_stop="53938" e_length="52"/>
          </exon>
          <intron i_serial="4" don_prob="0.969" acc_prob="0.972">
            <gDNA_intron_boundary i_start="53939" i_stop="54052" i_length="114"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="54053" e_stop="54186" e_length="134"/>
          </exon>
          <intron i_serial="5" don_prob="0.982" acc_prob="0.999">
            <gDNA_intron_boundary i_start="54187" i_stop="54511" i_length="325"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="54512" e_stop="54626" e_length="115"/>
          </exon>
          <intron i_serial="6" don_prob="0.867" acc_prob="0.845">
            <gDNA_intron_boundary i_start="54627" i_stop="54742" i_length="116"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="54743" e_stop="54829" e_length="87"/>
          </exon>
          <intron i_serial="7" don_prob="0.574" acc_prob="1.000">
            <gDNA_intron_boundary i_start="54830" i_stop="54966" i_length="137"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="54967" e_stop="55015" e_length="49"/>
          </exon>
          <intron i_serial="8" don_prob="0.994" acc_prob="0.607">
            <gDNA_intron_boundary i_start="55016" i_stop="56206" i_length="1191"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="56207" e_stop="56291" e_length="85"/>
          </exon>
          <intron i_serial="9" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="56292" i_stop="57537" i_length="1246"/>
          </intron>
          <exon e_serial="10" e_score="0.992">
            <gDNA_exon_boundary e_start="57538" e_stop="57668" e_length="131"/>
          </exon>
          <intron i_serial="10" don_prob="0.744" acc_prob="0.988">
            <gDNA_intron_boundary i_start="57669" i_stop="59101" i_length="1433"/>
          </intron>
          <exon e_serial="11" e_score="0.977">
            <gDNA_exon_boundary e_start="59102" e_stop="59452" e_length="351"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52157" stop="52325"/>
              <exon start="52422" stop="52458"/>
              <exon start="53496" stop="53575"/>
              <exon start="53887" stop="53938"/>
              <exon start="54053" stop="54186"/>
              <exon start="54512" stop="54626"/>
              <exon start="54743" stop="54829"/>
              <exon start="54967" stop="55015"/>
              <exon start="56207" stop="56291"/>
              <exon start="57538" stop="57668"/>
              <exon start="59102" stop="59452"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574596" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTCATCTTCCCCTCAATTTTCTCTGGTTACATTTTTGTTCCGCAGGCTCTGAGATCAGAAAATGGGAAGCGTTCCACTTCCCTCGTCGTCTCTACTAATTTCCAGCTCCAGTTCCTCCATTTTTGGAAGATCATCATCGACAATTTCCTATCCTCACCGGCGATTCAG : AAAGGTGGATGTTTCCTGCGATTACTCTTGTTTCGAA : ATAAGGGATGTCTCTTATCGACCTCCAGGAACCAAGATCGATCTACTGAGTCAAGTCAACCTTTCCATCCCTGAGAAAAG : TTTTGGCTTGATATTTGGACGGAGTGGCAGTGGAAAAACTACTTTATTGCAG : CTGATTGCAGGGTTAAGCAAACCAACATCAGGTTCAATATATGTGCAAAGATATGGTGATGATGATCAACAGATTAAGTCTCCTGAACCCTTACAACCTGAAAGAGTTGGCATTGTTTTCCAATTTCCTGAGAG : ATACTTTGTTGCGGACACTGTTCTTGATGAAGTTACATTTGGGTGGCCAAGACAAAAGGGTGGCCTACAATTAAGAGAGCTTCTTGCTTCTAGACTTCAAAAGGCCATTATGTCG : GTTGGTCTAACAGGAATATCTTTGGATAAGGATCCCCATTCATTAAGCGGTGGTTACAAACGTCGGCTAGCCCTTGCTATTCAGTTA : GTTCAAACACCAGATTTATTAATATTGGATGAGCCTCTTGCTGGTCTTG : ATTGGAAGGCTCGTGCAGATGTGGCAAAATTGTTAAAAGATCTGAAGAAGGAGCTAACTTTACTTGTTGTCAGCCATGACCTCAA : GGAGTTGGCATCTTTGGTAGATCAATCCTGGAGGATGGAAATGGGAGGAGCACTTAAAAAAGAGCCTCTACCCATTTAATGCACTGAACTTATAATGTTCCCAACAATCATTTTCTGATGTAATATATGAG : GTTTTTATGAGCCTTGAATTGCATACAATTCTTGGAGAGGTGCTCAAGGTTATTGATTTTGCTTCAATCCCTGACCATCGAGGTCTTCACATTTCATGTAACCTCTGTAATGTAATTAACAGTTTCTGTAATGAGTTTTGAGATGGTTTCTAATTTTCTGTACACTTAGTTCGCCGTTTAAACTCTCATTAAAGTTTGATGGTCTGCAGCATTTTCTTTGTCCTCGTCTCTCACCAAAAGTTTTTGAATGTTTATTGGAATTTTGTTCAAAATATGTATGGTAGTATGTATGTATTGGTAAATTAAATTACACTGTTGACATATATGAATAGTAGCTTTTCTAGTTGTGTT</gDNA_template>
            <first_frame> V  H  L  P  L  N  F  L  W  L  H  F  C  S  A  G  S  E  I  R  K  W  E  A  F  H  F  P  R  R  L  Y  *  F  P  A  P  V  P  P  F  L  E  D  H  H  R  Q  F  P  I  L  T  G  D  S   : E  R  W  M  F  P  A  I  T  L  V  S  K :   *  G  M  S  L  I  D  L  Q  E  P  R  S  I  Y  *  V  K  S  T  F  P  S  L  R  K   : V  L  A  *  Y  L  D  G  V  A  V  E  K  L  L  Y  C  S :   *  L  Q  G  *  A  N  Q  H  Q  V  Q  Y  M  C  K  D  M  V  M  M  I  N  R  L  S  L  L  N  P  Y  N  L  K  E  L  A  L  F  S  N  F  L  R   : D  T  L  L  R  T  L  F  L  M  K  L  H  L  G  G  Q  D  K  R  V  A  Y  N  *  E  S  F  L  L  L  D  F  K  R  P  L  C  R :   L  V  *  Q  E  Y  L  W  I  R  I  P  I  H  *  A  V  V  T  N  V  G  *  P  L  L  F  S  * :   F  K  H  Q  I  Y  *  Y  W  M  S  L  L  L  V  L  :  I  G  R  L  V  Q  M  W  Q  N  C  *  K  I  *  R  R  S  *  L  Y  L  L  S  A  M  T  S   : R  S  W  H  L  W  *  I  N  P  G  G  W  K  W  E  E  H  L  K  K  S  L  Y  P  F  N  A  L  N  L  *  C  S  Q  Q  S  F  S  D  V  I  Y  E  :  V  F  M  S  L  E  L  H  T  I  L  G  E  V  L  K  V  I  D  F  A  S  I  P  D  H  R  G  L  H  I  S  C  N  L  C  N  V  I  N  S  F  C  N  E  F  *  D  G  F  *  F  S  V  H  L  V  R  R  L  N  S  H  *  S  L  M  V  C  S  I  F  F  V  L  V  S  H  Q  K  F  L  N  V  Y  W  N  F  V  Q  N  M  Y  G  S  M  Y  V  L  V  N  *  I  T  L  L  T  Y  M  N  S  S  F  S  S  C  V </first_frame>
            <second_frame>  F  I  F  P  S  I  F  S  G  Y  I  F  V  P  Q  A  L  R  S  E  N  G  K  R  S  T  S  L  V  V  S  T  N  F  Q  L  Q  F  L  H  F  W  K  I  I  I  D  N  F  L  S  S  P  A  I  Q  :  K  G  G  C  F  L  R  L  L  L  F  R   : N  K  G  C  L  L  S  T  S  R  N  Q  D  R  S  T  E  S  S  Q  P  F  H  P  *  E  K  :  F  W  L  D  I  W  T  E  W  Q  W  K  N  Y  F  I  A   : A  D  C  R  V  K  Q  T  N  I  R  F  N  I  C  A  K  I  W  *  *  *  S  T  D  *  V  S  *  T  L  T  T  *  K  S  W  H  C  F  P  I  S  *  E  :  I  L  C  C  G  H  C  S  *  *  S  Y  I  W  V  A  K  T  K  G  W  P  T  I  K  R  A  S  C  F  *  T  S  K  G  H  Y  V   : G  W  S  N  R  N  I  F  G  *  G  S  P  F  I  K  R  W  L  Q  T  S  A  S  P  C  Y  S  V   : S  S  N  T  R  F  I  N  I  G  *  A  S  C  W  S  * :   L  E  G  S  C  R  C  G  K  I  V  K  R  S  E  E  G  A  N  F  T  C  C  Q  P  *  P  Q  :  G  V  G  I  F  G  R  S  I  L  E  D  G  N  G  R  S  T  *  K  R  A  S  T  H  L  M  H  *  T  Y  N  V  P  N  N  H  F  L  M  *  Y  M  R :   F  L  *  A  L  N  C  I  Q  F  L  E  R  C  S  R  L  L  I  L  L  Q  S  L  T  I  E  V  F  T  F  H  V  T  S  V  M  *  L  T  V  S  V  M  S  F  E  M  V  S  N  F  L  Y  T  *  F  A  V  *  T  L  I  K  V  *  W  S  A  A  F  S  L  S  S  S  L  T  K  S  F  *  M  F  I  G  I  L  F  K  I  C  M  V  V  C  M  Y  W  *  I  K  L  H  C  *  H  I  *  I  V  A  F  L  V  V   </second_frame>
            <third_frame>   S  S  S  P  Q  F  S  L  V  T  F  L  F  R  R  L  *  D  Q  K  M  G  S  V  P  L  P  S  S  S  L  L  I  S  S  S  S  S  S  I  F  G  R  S  S  S  T  I  S  Y  P  H  R  R  F  R :   K  V  D  V  S  C  D  Y  S  C  F  E  :  I  R  D  V  S  Y  R  P  P  G  T  K  I  D  L  L  S  Q  V  N  L  S  I  P  E  K  S :   F  G  L  I  F  G  R  S  G  S  G  K  T  T  L  L  Q  :  L  I  A  G  L  S  K  P  T  S  G  S  I  Y  V  Q  R  Y  G  D  D  D  Q  Q  I  K  S  P  E  P  L  Q  P  E  R  V  G  I  V  F  Q  F  P  E  R :   Y  F  V  A  D  T  V  L  D  E  V  T  F  G  W  P  R  Q  K  G  G  L  Q  L  R  E  L  L  A  S  R  L  Q  K  A  I  M  S  :  V  G  L  T  G  I  S  L  D  K  D  P  H  S  L  S  G  G  Y  K  R  R  L  A  L  A  I  Q  L  :  V  Q  T  P  D  L  L  I  L  D  E  P  L  A  G  L   : D  W  K  A  R  A  D  V  A  K  L  L  K  D  L  K  K  E  L  T  L  L  V  V  S  H  D  L  K :   E  L  A  S  L  V  D  Q  S  W  R  M  E  M  G  G  A  L  K  K  E  P  L  P  I  *  C  T  E  L  I  M  F  P  T  I  I  F  *  C  N  I  *   : G  F  Y  E  P  *  I  A  Y  N  S  W  R  G  A  Q  G  Y  *  F  C  F  N  P  *  P  S  R  S  S  H  F  M  *  P  L  *  C  N  *  Q  F  L  *  *  V  L  R  W  F  L  I  F  C  T  L  S  S  P  F  K  L  S  L  K  F  D  G  L  Q  H  F  L  C  P  R  L  S  P  K  V  F  E  C  L  L  E  F  C  S  K  Y  V  W  *  Y  V  C  I  G  K  L  N  Y  T  V  D  I  Y  E  *  *  L  F  *  L  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52210" stop="52325"/>
                    <exon start="52422" stop="52458"/>
                    <exon start="53496" stop="53575"/>
                    <exon start="53887" stop="53938"/>
                    <exon start="54053" stop="54186"/>
                    <exon start="54512" stop="54626"/>
                    <exon start="54743" stop="54829"/>
                    <exon start="54967" stop="55015"/>
                    <exon start="56207" stop="56291"/>
                    <exon start="57538" stop="57616"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>831</number_coding_nucleotides>
                  <number_encoded_amino_acids>277</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DQKMGSVPLPSSSLLISSSSSSIFGRSSSTISYPHRRFRKVDVSCDYSCFEIRDVSYRPPGTKIDLLSQVNLSIPEKSFGLIFGRSGSGKTTLLQLIAGLSKPTSGSIYVQRYGDDDQQIKSPEPLQPERVGIVFQFPERYFVADTVLDEVTFGWPRQKGGLQLRELLASRLQKAIMSVGLTGISLDKDPHSLSGGYKRRLALAIQLVQTPDLLILDEPLAGLDWKARADVAKLLKDLKKELTLLVVSHDLKELASLVDQSWRMEMGGALKKEPLPI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="55230" e_stop="56013"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.953"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.953">
            <gDNA_exon_boundary e_start="55230" e_stop="56013" e_length="784"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55230" stop="56013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574599" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTGCTATGCCTGCACAAGCATTTTACTTTTGTTATATTTGATGAACAACCCTTTTTCTCACCATGGTTATTGAAGTCTTGATTCCATCTTCCATATTCTGTAATCTGAGTAGTCTGTTCTTACAAAAGTCCTAACATGTTATCTTATGACAGAGACACCAAGATTGTCAACTCTTAGTAAACCCTATAGGCTGAGCTGCTAATAATGACAAACAAGTAAGAATAGGACGAGTAGTTAGCTTTGGTAATATAAAGAATAGAGTCAGAGGTTATGCTACCTGCTTTTACTTTATGAAGAATATGCTGAATGTAAATCTTTCTGCCATAGAATATTAATATTCTATGTTAGGTTGCAAATTCTCCAGAACTAAAGGTAACCAGGGTGGGATCTCTATATCTATTTTAGAGGAACTCTTCTTTGGCTTCACTTAAAAGCAATTTTTTTTGCTTCTTCTTGTAGAAGCTCAGAGTTCCTTGTAGGGCTATCAGATCTTATTCACCAAATATACATCGATGTACACATTGTTGTGTTAGAACACTCTTTCTGCTATCTGTGTACTAGCTCTCATATTTGCTTTTGCTGATATTTTACAAGGGCTATTTTGAAATTTTTTATATAGTTAATTCTTTACTATGGTTGGTACAAGTGAAGTTCAAGAGCTTGCCAATTAGATCATACCTCTCTTTGGATTGCATGTAGTATAATGGTAGTGAGTCTTGGTTGTATTAAGCAGCAGGACTGTTTTATGGAGTGAAGCTATTCCCACAAAGATTTTGAAAGCT</gDNA_template>
            <first_frame> N  C  Y  A  C  T  S  I  L  L  L  L  Y  L  M  N  N  P  F  S  H  H  G  Y  *  S  L  D  S  I  F  H  I  L  *  S  E  *  S  V  L  T  K  V  L  T  C  Y  L  M  T  E  T  P  R  L  S  T  L  S  K  P  Y  R  L  S  C  *  *  *  Q  T  S  K  N  R  T  S  S  *  L  W  *  Y  K  E  *  S  Q  R  L  C  Y  L  L  L  L  Y  E  E  Y  A  E  C  K  S  F  C  H  R  I  L  I  F  Y  V  R  L  Q  I  L  Q  N  *  R  *  P  G  W  D  L  Y  I  Y  F  R  G  T  L  L  W  L  H  L  K  A  I  F  F  A  S  S  C  R  S  S  E  F  L  V  G  L  S  D  L  I  H  Q  I  Y  I  D  V  H  I  V  V  L  E  H  S  F  C  Y  L  C  T  S  S  H  I  C  F  C  *  Y  F  T  R  A  I  L  K  F  F  I  *  L  I  L  Y  Y  G  W  Y  K  *  S  S  R  A  C  Q  L  D  H  T  S  L  W  I  A  C  S  I  M  V  V  S  L  G  C  I  K  Q  Q  D  C  F  M  E  *  S  Y  S  H  K  D  F  E  S  </first_frame>
            <second_frame>  I  A  M  P  A  Q  A  F  Y  F  C  Y  I  *  *  T  T  L  F  L  T  M  V  I  E  V  L  I  P  S  S  I  F  C  N  L  S  S  L  F  L  Q  K  S  *  H  V  I  L  *  Q  R  H  Q  D  C  Q  L  L  V  N  P  I  G  *  A  A  N  N  D  K  Q  V  R  I  G  R  V  V  S  F  G  N  I  K  N  R  V  R  G  Y  A  T  C  F  Y  F  M  K  N  M  L  N  V  N  L  S  A  I  E  Y  *  Y  S  M  L  G  C  K  F  S  R  T  K  G  N  Q  G  G  I  S  I  S  I  L  E  E  L  F  F  G  F  T  *  K  Q  F  F  L  L  L  L  V  E  A  Q  S  S  L  *  G  Y  Q  I  L  F  T  K  Y  T  S  M  Y  T  L  L  C  *  N  T  L  S  A  I  C  V  L  A  L  I  F  A  F  A  D  I  L  Q  G  L  F  *  N  F  L  Y  S  *  F  F  T  M  V  G  T  S  E  V  Q  E  L  A  N  *  I  I  P  L  F  G  L  H  V  V  *  W  *  *  V  L  V  V  L  S  S  R  T  V  L  W  S  E  A  I  P  T  K  I  L  K  A </second_frame>
            <third_frame>   L  L  C  L  H  K  H  F  T  F  V  I  F  D  E  Q  P  F  F  S  P  W  L  L  K  S  *  F  H  L  P  Y  S  V  I  *  V  V  C  S  Y  K  S  P  N  M  L  S  Y  D  R  D  T  K  I  V  N  S  *  *  T  L  *  A  E  L  L  I  M  T  N  K  *  E  *  D  E  *  L  A  L  V  I  *  R  I  E  S  E  V  M  L  P  A  F  T  L  *  R  I  C  *  M  *  I  F  L  P  *  N  I  N  I  L  C  *  V  A  N  S  P  E  L  K  V  T  R  V  G  S  L  Y  L  F  *  R  N  S  S  L  A  S  L  K  S  N  F  F  C  F  F  L  *  K  L  R  V  P  C  R  A  I  R  S  Y  S  P  N  I  H  R  C  T  H  C  C  V  R  T  L  F  L  L  S  V  Y  *  L  S  Y  L  L  L  L  I  F  Y  K  G  Y  F  E  I  F  Y  I  V  N  S  L  L  W  L  V  Q  V  K  F  K  S  L  P  I  R  S  Y  L  S  L  D  C  M  *  Y  N  G  S  E  S  W  L  Y  *  A  A  G  L  F  Y  G  V  K  L  F  P  Q  R  F  *  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55608" stop="55814"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PGWDLYIYFRGTLLWLHLKAIFFASSCRSSEFLVGLSDLIHQIYIDVHIVVLEHSFCYLCTSSHICFC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="52172" e_stop="52325"/>
            <exon e_start="52422" e_stop="53205"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.981" acc_prob="0.871" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="52172" e_stop="52325" e_length="154"/>
          </exon>
          <intron i_serial="1" don_prob="0.981" acc_prob="0.871">
            <gDNA_intron_boundary i_start="52326" i_stop="52421" i_length="96"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="52422" e_stop="53205" e_length="784"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52172" stop="52325"/>
              <exon start="52422" stop="53205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574601" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTTTCTCTGGTTACATTTTTGTTCCGCAGGCTCTGAGATCAGAAAATGGGAAGCGTTCCACTTCCCTCGTCGTCTCTACTAATTTCCAGCTCCAGTTCCTCCATTTTTGGAAGATCATCATCGACAATTTCCTATCCTCACCGGCGATTCAG : AAAGGTGGATGTTTCCTGCGATTACTCTTGTTTCGAAGTAAAGCCCTCTTACCTTTCAACTTTTTAATGGCCATCGTTTTGTACTGTTTTCTAGTATATAACTATATATTATCCTAATTTTAGTTAAATTGATTCATGTAAAGTTCAACGTTGTTTGCTTGCCTACATTTACGATTTTGATTAACCGAATATTCACCTACTCCATTAGTCACGCTATAATTCTTCTTACAAATCATAGGTATTTATTTGTTATAATTGTATCTCTCTGTATCCCGGTTTACTCTTTTCTTCATTATTTGTTTGCTTTCTTTTCTCTGGGTTTAGGGATACTCGATAGCTTCGGTTGTTATGAATTTGCTAACTTCTTAGGTTCAGAGGTTCAGTCTATCTGAAGGAGTTTGGTGGTATTTGAGCTTTTCTGGAACTTGATAACTATTGCAGGCGCTTTGTATCATCTATATACGAGCAGAAGCAATGGATATATCACAGGCTTCCTCTTTTTTCTCTTCTTCTAGGTGACAGCAGTGGCTAAGCCATTAATTCTGATAAGGGGATTCATAAAGAAGAAAAATACAAAATGGCATGCTGATTTGTACCTTTCTACTCTTATGTATAGGGAATTTGAGATCTTTTTTGAACAAGAAAACATAATTTTCACCTATTTGCTAGTTTAACTTCCTGACAATTGAATTCCTTTCGTAGTGTATGGCTCCGTCACTGGACTGGCGGAGAAAGGAGTTATGTTAATTAAGTGGCGAGAACTTATTCTGTAACATATACACTC</gDNA_template>
            <first_frame> N  F  L  W  L  H  F  C  S  A  G  S  E  I  R  K  W  E  A  F  H  F  P  R  R  L  Y  *  F  P  A  P  V  P  P  F  L  E  D  H  H  R  Q  F  P  I  L  T  G  D  S   : E  R  W  M  F  P  A  I  T  L  V  S  K  *  S  P  L  T  F  Q  L  F  N  G  H  R  F  V  L  F  S  S  I  *  L  Y  I  I  L  I  L  V  K  L  I  H  V  K  F  N  V  V  C  L  P  T  F  T  I  L  I  N  R  I  F  T  Y  S  I  S  H  A  I  I  L  L  T  N  H  R  Y  L  F  V  I  I  V  S  L  C  I  P  V  Y  S  F  L  H  Y  L  F  A  F  F  S  L  G  L  G  I  L  D  S  F  G  C  Y  E  F  A  N  F  L  G  S  E  V  Q  S  I  *  R  S  L  V  V  F  E  L  F  W  N  L  I  T  I  A  G  A  L  Y  H  L  Y  T  S  R  S  N  G  Y  I  T  G  F  L  F  F  L  F  F  *  V  T  A  V  A  K  P  L  I  L  I  R  G  F  I  K  K  K  N  T  K  W  H  A  D  L  Y  L  S  T  L  M  Y  R  E  F  E  I  F  F  E  Q  E  N  I  I  F  T  Y  L  L  V  *  L  P  D  N  *  I  P  F  V  V  Y  G  S  V  T  G  L  A  E  K  G  V  M  L  I  K  W  R  E  L  I  L  *  H  I  H   </first_frame>
            <second_frame>  I  F  S  G  Y  I  F  V  P  Q  A  L  R  S  E  N  G  K  R  S  T  S  L  V  V  S  T  N  F  Q  L  Q  F  L  H  F  W  K  I  I  I  D  N  F  L  S  S  P  A  I  Q  :  K  G  G  C  F  L  R  L  L  L  F  R  S  K  A  L  L  P  F  N  F  L  M  A  I  V  L  Y  C  F  L  V  Y  N  Y  I  L  S  *  F  *  L  N  *  F  M  *  S  S  T  L  F  A  C  L  H  L  R  F  *  L  T  E  Y  S  P  T  P  L  V  T  L  *  F  F  L  Q  I  I  G  I  Y  L  L  *  L  Y  L  S  V  S  R  F  T  L  F  F  I  I  C  L  L  S  F  L  W  V  *  G  Y  S  I  A  S  V  V  M  N  L  L  T  S  *  V  Q  R  F  S  L  S  E  G  V  W  W  Y  L  S  F  S  G  T  *  *  L  L  Q  A  L  C  I  I  Y  I  R  A  E  A  M  D  I  S  Q  A  S  S  F  F  S  S  S  R  *  Q  Q  W  L  S  H  *  F  *  *  G  D  S  *  R  R  K  I  Q  N  G  M  L  I  C  T  F  L  L  L  C  I  G  N  L  R  S  F  L  N  K  K  T  *  F  S  P  I  C  *  F  N  F  L  T  I  E  F  L  S  *  C  M  A  P  S  L  D  W  R  R  K  E  L  C  *  L  S  G  E  N  L  F  C  N  I  Y  T  </second_frame>
            <third_frame>   F  S  L  V  T  F  L  F  R  R  L  *  D  Q  K  M  G  S  V  P  L  P  S  S  S  L  L  I  S  S  S  S  S  S  I  F  G  R  S  S  S  T  I  S  Y  P  H  R  R  F  R :   K  V  D  V  S  C  D  Y  S  C  F  E  V  K  P  S  Y  L  S  T  F  *  W  P  S  F  C  T  V  F  *  Y  I  T  I  Y  Y  P  N  F  S  *  I  D  S  C  K  V  Q  R  C  L  L  A  Y  I  Y  D  F  D  *  P  N  I  H  L  L  H  *  S  R  Y  N  S  S  Y  K  S  *  V  F  I  C  Y  N  C  I  S  L  Y  P  G  L  L  F  S  S  L  F  V  C  F  L  F  S  G  F  R  D  T  R  *  L  R  L  L  *  I  C  *  L  L  R  F  R  G  S  V  Y  L  K  E  F  G  G  I  *  A  F  L  E  L  D  N  Y  C  R  R  F  V  S  S  I  Y  E  Q  K  Q  W  I  Y  H  R  L  P  L  F  S  L  L  L  G  D  S  S  G  *  A  I  N  S  D  K  G  I  H  K  E  E  K  Y  K  M  A  C  *  F  V  P  F  Y  S  Y  V  *  G  I  *  D  L  F  *  T  R  K  H  N  F  H  L  F  A  S  L  T  S  *  Q  L  N  S  F  R  S  V  W  L  R  H  W  T  G  G  E  R  S  Y  V  N  *  V  A  R  T  Y  S  V  T  Y  T  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52523" stop="52813"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>288</number_coding_nucleotides>
                  <number_encoded_amino_acids>96</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LYIILILVKLIHVKFNVVCLPTFTILINRIFTYSISHAIILLTNHRYLFVIIVSLCIPVYSFLHYLFAFFSLGLGILDSFGCYEFANFLGSEVQSI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52173" stop="52325"/>
                    <exon start="52422" stop="52538"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>267</number_coding_nucleotides>
                  <number_encoded_amino_acids>89</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFSGYIFVPQALRSENGKRSTSLVVSTNFQLQFLHFWKIIIDNFLSSPAIQKGGCFLRLLLFRSKALLPFNFLMAIVLYCFLVYNYILS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="61478" PGL_stop="62284"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61478" e_stop="62284"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.910"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.910">
            <gDNA_exon_boundary e_start="61478" e_stop="62284" e_length="807"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61478" stop="62284"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U583702" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCTCAACAAATTGAGGATGAGACCGTCAAGTTTGCACACTATTTGGGTATCAAAGTTGTTTCTATTGTTGGTGGGCAGTCCATAGAAGAGCAAGGTTTTAGGATTAGGCAAGGCTGTGAAGTTGTGATTGCGACCCCTGGGCGACTTCTCGATTGCTTGGAGAGACGTTATTGTGTTCTGAACCAGTGTAATTATGTTGTTCTCGATGAGGCTGACCGGATGATTGATATGGGTTTTGGACCTCAAGTTGTTGGTGTACTGGATGCAATGCCTTCAAGTAATATGAAACCAAAGAACGAGGATGAAAAGCTTGATGAGAATAAGATTTATCGAACCACTTATATGTTCAGTGCTACCATGCCACCTGCCGTAGAGCGGCTGGCTAGAAATTACTTAAGAAATCCTGCTGTCGTGACTATTGGCACTGCTGGAAAGGTTACTGACCTCATTACTCAGCATGTCTTCATGGTAAAGGAATCTGAGAAAATGTTTAAGTTGCAGAGGTTTCTGGATGAGCTTGGAGATAAGACTGCTATTGTGTTCATCAACTCTAGAAAGCGGGTTAACACTGTTGCCAAGCATCTGGATAAAGCTGGCTATAGGGTAACCACACTGCATGGTGGGAAATCACAGGAGCAGAGGGAAATCAGCCTTGAAGGATTTAGGACAAAGAAGTATAATGTGTTAGTTGCTAGTGATGTTGCCGGTCGTGGAATTGATATACCTGATGTGGCCCATGTGATTAACTATGATATGACAAACAAACTTGAAGCATACACCCATCGTATTGGACGTACAGGTCGTGCA</gDNA_template>
            <first_frame> A  Q  Q  I  E  D  E  T  V  K  F  A  H  Y  L  G  I  K  V  V  S  I  V  G  G  Q  S  I  E  E  Q  G  F  R  I  R  Q  G  C  E  V  V  I  A  T  P  G  R  L  L  D  C  L  E  R  R  Y  C  V  L  N  Q  C  N  Y  V  V  L  D  E  A  D  R  M  I  D  M  G  F  G  P  Q  V  V  G  V  L  D  A  M  P  S  S  N  M  K  P  K  N  E  D  E  K  L  D  E  N  K  I  Y  R  T  T  Y  M  F  S  A  T  M  P  P  A  V  E  R  L  A  R  N  Y  L  R  N  P  A  V  V  T  I  G  T  A  G  K  V  T  D  L  I  T  Q  H  V  F  M  V  K  E  S  E  K  M  F  K  L  Q  R  F  L  D  E  L  G  D  K  T  A  I  V  F  I  N  S  R  K  R  V  N  T  V  A  K  H  L  D  K  A  G  Y  R  V  T  T  L  H  G  G  K  S  Q  E  Q  R  E  I  S  L  E  G  F  R  T  K  K  Y  N  V  L  V  A  S  D  V  A  G  R  G  I  D  I  P  D  V  A  H  V  I  N  Y  D  M  T  N  K  L  E  A  Y  T  H  R  I  G  R  T  G  R  A </first_frame>
            <second_frame>  L  N  K  L  R  M  R  P  S  S  L  H  T  I  W  V  S  K  L  F  L  L  L  V  G  S  P  *  K  S  K  V  L  G  L  G  K  A  V  K  L  *  L  R  P  L  G  D  F  S  I  A  W  R  D  V  I  V  F  *  T  S  V  I  M  L  F  S  M  R  L  T  G  *  L  I  W  V  L  D  L  K  L  L  V  Y  W  M  Q  C  L  Q  V  I  *  N  Q  R  T  R  M  K  S  L  M  R  I  R  F  I  E  P  L  I  C  S  V  L  P  C  H  L  P  *  S  G  W  L  E  I  T  *  E  I  L  L  S  *  L  L  A  L  L  E  R  L  L  T  S  L  L  S  M  S  S  W  *  R  N  L  R  K  C  L  S  C  R  G  F  W  M  S  L  E  I  R  L  L  L  C  S  S  T  L  E  S  G  L  T  L  L  P  S  I  W  I  K  L  A  I  G  *  P  H  C  M  V  G  N  H  R  S  R  G  K  S  A  L  K  D  L  G  Q  R  S  I  M  C  *  L  L  V  M  L  P  V  V  E  L  I  Y  L  M  W  P  M  *  L  T  M  I  *  Q  T  N  L  K  H  T  P  I  V  L  D  V  Q  V  V   </second_frame>
            <third_frame>   S  T  N  *  G  *  D  R  Q  V  C  T  L  F  G  Y  Q  S  C  F  Y  C  W  W  A  V  H  R  R  A  R  F  *  D  *  A  R  L  *  S  C  D  C  D  P  W  A  T  S  R  L  L  G  E  T  L  L  C  S  E  P  V  *  L  C  C  S  R  *  G  *  P  D  D  *  Y  G  F  W  T  S  S  C  W  C  T  G  C  N  A  F  K  *  Y  E  T  K  E  R  G  *  K  A  *  *  E  *  D  L  S  N  H  L  Y  V  Q  C  Y  H  A  T  C  R  R  A  A  G  *  K  L  L  K  K  S  C  C  R  D  Y  W  H  C  W  K  G  Y  *  P  H  Y  S  A  C  L  H  G  K  G  I  *  E  N  V  *  V  A  E  V  S  G  *  A  W  R  *  D  C  Y  C  V  H  Q  L  *  K  A  G  *  H  C  C  Q  A  S  G  *  S  W  L  *  G  N  H  T  A  W  W  E  I  T  G  A  E  G  N  Q  P  *  R  I  *  D  K  E  V  *  C  V  S  C  *  *  C  C  R  S  W  N  *  Y  T  *  C  G  P  C  D  *  L  *  Y  D  K  Q  T  *  S  I  H  P  S  Y  W  T  Y  R  S  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61478" stop="62284"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>807</number_coding_nucleotides>
                  <number_encoded_amino_acids>269</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AQQIEDETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLLDCLERRYCVLNQCNYVVLDEADRMIDMGFGPQVVGVLDAMPSSNMKPKNEDEKLDENKIYRTTYMFSATMPPAVERLARNYLRNPAVVTIGTAGKVTDLITQHVFMVKESEKMFKLQRFLDELGDKTAIVFINSRKRVNTVAKHLDKAGYRVTTLHGGKSQEQREISLEGFRTKKYNVLVASDVAGRGIDIPDVAHVINYDMTNKLEAYTHRIGRTGRA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="69410" PGL_stop="70296"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69410" e_stop="70296"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="69410" e_stop="70296" e_length="887"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69410" stop="70296"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576961" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTAAACAAAGAGCCTCTTTTTATTTATTTATTACTATAACCTGCAAGGTAGACCCATCTAGTTTCCATTGATGGATCCCAAACAGGCTAACCACAACAATATTAAGCCTACTCATGATCAGATAAAAGAGTTGCAGATTTTGAAAAATGATGAAACGAACAAGGTGGCTGCTCCCAAAAGAAAAGATAGGCATACAAAAGTTGAAGGTAGAGGGAGGAGAATACGTATGCCGGCGCTCTGTGCAGCAAGAATCTTCCAGCTTACGCGCGAATTGGGTCATAAATCTGATGGTGAGACAATTCAGTGGCTGCTGCAGCAAGCCGAGCCTTCGATTATTGCTGCTACTGGCACAGGGACAATACCTGCCTCGGCTTTAGCTGCAGCAGCCTCTGTTTCTCAACAGGGGATCTCTGTATCAGCTGGTTTAATGATTGAATCGGGGGCGAATATCGCGGGGTCTGGTAGCAGTAGAAGTAGTAATAGTAGGACCAATTGGCCAATGATCTGTGGGAATTTTGGAAGACCCCATTTGGCTACAGCAGGAATGTGGCCTGCCCCTGCCCCTGTTGTCACTAGTTTTGGGTTTCAATCCTCATCTGCTCCATCAAGCGCGAGTTTAGGTAGTGATAGTTCAAATTATTACTTACAGAAAATTGGGTTTCCTGGATTTGATCTGCCTGCAGCTACAAGTATGAATCCGATGTGTTTTACTTCAATTCTTGGTGGAAGTAATCAGCAACTGCCAGGATTGGAACTGGGATTATCTCAAGAGGGTCATTTAGGGGTTTTGAACCAGATATACCAGCAGGCAAGAATGCAACATCCGCAGCAGCAACATCAACAACAACAACAATCTCCGGAGGAGGATTCTCAAGGATCAGGACATT</gDNA_template>
            <first_frame> V  N  K  E  P  L  F  I  Y  L  L  L  *  P  A  R  *  T  H  L  V  S  I  D  G  S  Q  T  G  *  P  Q  Q  Y  *  A  Y  S  *  S  D  K  R  V  A  D  F  E  K  *  *  N  E  Q  G  G  C  S  Q  K  K  R  *  A  Y  K  S  *  R  *  R  E  E  N  T  Y  A  G  A  L  C  S  K  N  L  P  A  Y  A  R  I  G  S  *  I  *  W  *  D  N  S  V  A  A  A  A  S  R  A  F  D  Y  C  C  Y  W  H  R  D  N  T  C  L  G  F  S  C  S  S  L  C  F  S  T  G  D  L  C  I  S  W  F  N  D  *  I  G  G  E  Y  R  G  V  W  *  Q  *  K  *  *  *  *  D  Q  L  A  N  D  L  W  E  F  W  K  T  P  F  G  Y  S  R  N  V  A  C  P  C  P  C  C  H  *  F  W  V  S  I  L  I  C  S  I  K  R  E  F  R  *  *  *  F  K  L  L  L  T  E  N  W  V  S  W  I  *  S  A  C  S  Y  K  Y  E  S  D  V  F  Y  F  N  S  W  W  K  *  S  A  T  A  R  I  G  T  G  I  I  S  R  G  S  F  R  G  F  E  P  D  I  P  A  G  K  N  A  T  S  A  A  A  T  S  T  T  T  T  I  S  G  G  G  F  S  R  I  R  T   </first_frame>
            <second_frame>  *  T  K  S  L  F  L  F  I  Y  Y  Y  N  L  Q  G  R  P  I  *  F  P  L  M  D  P  K  Q  A  N  H  N  N  I  K  P  T  H  D  Q  I  K  E  L  Q  I  L  K  N  D  E  T  N  K  V  A  A  P  K  R  K  D  R  H  T  K  V  E  G  R  G  R  R  I  R  M  P  A  L  C  A  A  R  I  F  Q  L  T  R  E  L  G  H  K  S  D  G  E  T  I  Q  W  L  L  Q  Q  A  E  P  S  I  I  A  A  T  G  T  G  T  I  P  A  S  A  L  A  A  A  A  S  V  S  Q  Q  G  I  S  V  S  A  G  L  M  I  E  S  G  A  N  I  A  G  S  G  S  S  R  S  S  N  S  R  T  N  W  P  M  I  C  G  N  F  G  R  P  H  L  A  T  A  G  M  W  P  A  P  A  P  V  V  T  S  F  G  F  Q  S  S  S  A  P  S  S  A  S  L  G  S  D  S  S  N  Y  Y  L  Q  K  I  G  F  P  G  F  D  L  P  A  A  T  S  M  N  P  M  C  F  T  S  I  L  G  G  S  N  Q  Q  L  P  G  L  E  L  G  L  S  Q  E  G  H  L  G  V  L  N  Q  I  Y  Q  Q  A  R  M  Q  H  P  Q  Q  Q  H  Q  Q  Q  Q  Q  S  P  E  E  D  S  Q  G  S  G  H  </second_frame>
            <third_frame>   K  Q  R  A  S  F  Y  L  F  I  T  I  T  C  K  V  D  P  S  S  F  H  *  W  I  P  N  R  L  T  T  T  I  L  S  L  L  M  I  R  *  K  S  C  R  F  *  K  M  M  K  R  T  R  W  L  L  P  K  E  K  I  G  I  Q  K  L  K  V  E  G  G  E  Y  V  C  R  R  S  V  Q  Q  E  S  S  S  L  R  A  N  W  V  I  N  L  M  V  R  Q  F  S  G  C  C  S  K  P  S  L  R  L  L  L  L  L  A  Q  G  Q  Y  L  P  R  L  *  L  Q  Q  P  L  F  L  N  R  G  S  L  Y  Q  L  V  *  *  L  N  R  G  R  I  S  R  G  L  V  A  V  E  V  V  I  V  G  P  I  G  Q  *  S  V  G  I  L  E  D  P  I  W  L  Q  Q  E  C  G  L  P  L  P  L  L  S  L  V  L  G  F  N  P  H  L  L  H  Q  A  R  V  *  V  V  I  V  Q  I  I  T  Y  R  K  L  G  F  L  D  L  I  C  L  Q  L  Q  V  *  I  R  C  V  L  L  Q  F  L  V  E  V  I  S  N  C  Q  D  W  N  W  D  Y  L  K  R  V  I  *  G  F  *  T  R  Y  T  S  R  Q  E  C  N  I  R  S  S  N  I  N  N  N  N  N  L  R  R  R  I  L  K  D  Q  D  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69471" stop="70295"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>825</number_coding_nucleotides>
                  <number_encoded_amino_acids>275</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FPLMDPKQANHNNIKPTHDQIKELQILKNDETNKVAAPKRKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAASVSQQGISVSAGLMIESGANIAGSGSSRSSNSRTNWPMICGNFGRPHLATAGMWPAPAPVVTSFGFQSSSAPSSASLGSDSSNYYLQKIGFPGFDLPAATSMNPMCFTSILGGSNQQLPGLELGLSQEGHLGVLNQIYQQARMQHPQQQHQQQQQSPEEDSQGSGH</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="81210" PGL_stop="72921"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="81210" e_stop="81119"/>
            <exon e_start="81026" e_stop="80847"/>
            <exon e_start="78867" e_stop="78697"/>
            <exon e_start="73329" e_stop="72921"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.973" acc_prob="0.986" e_score="0.935"/>
          <exon-intron don_prob="0.989" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.935">
            <gDNA_exon_boundary e_start="81210" e_stop="81119" e_length="92"/>
          </exon>
          <intron i_serial="1" don_prob="0.973" acc_prob="0.986">
            <gDNA_intron_boundary i_start="81118" i_stop="81027" i_length="92"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="81026" e_stop="80847" e_length="180"/>
          </exon>
          <intron i_serial="2" don_prob="0.989" acc_prob="0.980">
            <gDNA_intron_boundary i_start="80846" i_stop="78868" i_length="1979"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="78867" e_stop="78697" e_length="171"/>
          </exon>
          <intron i_serial="3" don_prob="0.978" acc_prob="0.991">
            <gDNA_intron_boundary i_start="78696" i_stop="73330" i_length="5367"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="73329" e_stop="72921" e_length="409"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81210" stop="81119"/>
              <exon start="81026" stop="80847"/>
              <exon start="78867" stop="78697"/>
              <exon start="73329" stop="72921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574691" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACAGTGGAGTTCAGTTGTGTCTAGGGTTCCCCCATTTTAGCTGTGCGATTCAATGCAATCAAGCAGAAGAATCCTTGCTCTTTAATACACTG : GTTTCGGAGGTGAAAAAACTGAGAAGAAAGAGGTTGGTGGGCGATCACAAATGCCGGAGGAAGATTTGACTGAAGTTAAGTTTCGTTTGTTCGATGGATCAGATGTGGGTCCATTTCAGTTCTCCCCGGCTTCAACCGTAGCTATGCTGAAAGAGAGAATTGTTGCTGAGTGGCCTAAAG : ATAAGAAAATTGCACCTAAGGCGGCAAATGATGTCAAGTTGATAAGTGCTGGGAAAATTTTGGAGAACAACAAGACTGTTGGTCAATGTAAAACACCTTTCGGTGAACTACCTAATGGTGTGATTACCATGCATGCTGTTGTACAGCCATCAGTAGGTAAATCAAAATCAG : AAAAGAAGATTGACGAGACTCCGAAGAAAAGTGTGTGCGCGTGTACCATAATGTGAGATTGTAAGTGATTCAAGTTTAATCCTGTGGTATTCTTGGGGGATAAACTGCTGCTGTGAAGTTCAGGGAAAACAGTATGATAGCTCATTGTTACTTGTTTGTTCGTTGAACGGCTATTCAATGTAACAGCGTGTCTATTTGTTTGAATGAATTTGGTAGGTGTACATTTTGTAATTGCAGATTTCTTATACAGAAATACAGAAAGTGTGCTGGATTGCATGCTATAGGATTTTACCGAGCTCTTGTTATTCTATTCTGGGTCCTTATTATTCAACTTAGATCGTGATGATCCGTATACTCTAATCTTTGACGTCTAAAAAATCAAGAAGTATGCTGGATTCGAAATTGTTAG</gDNA_template>
            <first_frame> T  V  E  F  S  C  V  *  G  S  P  I  L  A  V  R  F  N  A  I  K  Q  K  N  P  C  S  L  I  H  W :   F  R  R  *  K  N  *  E  E  R  G  W  W  A  I  T  N  A  G  G  R  F  D  *  S  *  V  S  F  V  R  W  I  R  C  G  S  I  S  V  L  P  G  F  N  R  S  Y  A  E  R  E  N  C  C  *  V  A  *  R :   *  E  N  C  T  *  G  G  K  *  C  Q  V  D  K  C  W  E  N  F  G  E  Q  Q  D  C  W  S  M  *  N  T  F  R  *  T  T  *  W  C  D  Y  H  A  C  C  C  T  A  I  S  R  *  I  K  I  R :   K  E  D  *  R  D  S  E  E  K  C  V  R  V  Y  H  N  V  R  L  *  V  I  Q  V  *  S  C  G  I  L  G  G  *  T  A  A  V  K  F  R  E  N  S  M  I  A  H  C  Y  L  F  V  R  *  T  A  I  Q  C  N  S  V  S  I  C  L  N  E  F  G  R  C  T  F  C  N  C  R  F  L  I  Q  K  Y  R  K  C  A  G  L  H  A  I  G  F  Y  R  A  L  V  I  L  F  W  V  L  I  I  Q  L  R  S  *  *  S  V  Y  S  N  L  *  R  L  K  N  Q  E  V  C  W  I  R  N  C  * </first_frame>
            <second_frame>  Q  W  S  S  V  V  S  R  V  P  P  F  *  L  C  D  S  M  Q  S  S  R  R  I  L  A  L  *  Y  T   : G  F  G  G  E  K  T  E  K  K  E  V  G  G  R  S  Q  M  P  E  E  D  L  T  E  V  K  F  R  L  F  D  G  S  D  V  G  P  F  Q  F  S  P  A  S  T  V  A  M  L  K  E  R  I  V  A  E  W  P  K   : D  K  K  I  A  P  K  A  A  N  D  V  K  L  I  S  A  G  K  I  L  E  N  N  K  T  V  G  Q  C  K  T  P  F  G  E  L  P  N  G  V  I  T  M  H  A  V  V  Q  P  S  V  G  K  S  K  S   : E  K  K  I  D  E  T  P  K  K  S  V  C  A  C  T  I  M  *  D  C  K  *  F  K  F  N  P  V  V  F  L  G  D  K  L  L  L  *  S  S  G  K  T  V  *  *  L  I  V  T  C  L  F  V  E  R  L  F  N  V  T  A  C  L  F  V  *  M  N  L  V  G  V  H  F  V  I  A  D  F  L  Y  R  N  T  E  S  V  L  D  C  M  L  *  D  F  T  E  L  L  L  F  Y  S  G  S  L  L  F  N  L  D  R  D  D  P  Y  T  L  I  F  D  V  *  K  I  K  K  Y  A  G  F  E  I  V   </second_frame>
            <third_frame>   S  G  V  Q  L  C  L  G  F  P  H  F  S  C  A  I  Q  C  N  Q  A  E  E  S  L  L  F  N  T  L  :  V  S  E  V  K  K  L  R  R  K  R  L  V  G  D  H  K  C  R  R  K  I  *  L  K  L  S  F  V  C  S  M  D  Q  M  W  V  H  F  S  S  P  R  L  Q  P  *  L  C  *  K  R  E  L  L  L  S  G  L  K  :  I  R  K  L  H  L  R  R  Q  M  M  S  S  *  *  V  L  G  K  F  W  R  T  T  R  L  L  V  N  V  K  H  L  S  V  N  Y  L  M  V  *  L  P  C  M  L  L  Y  S  H  Q  *  V  N  Q  N  Q  :  K  R  R  L  T  R  L  R  R  K  V  C  A  R  V  P  *  C  E  I  V  S  D  S  S  L  I  L  W  Y  S  W  G  I  N  C  C  C  E  V  Q  G  K  Q  Y  D  S  S  L  L  L  V  C  S  L  N  G  Y  S  M  *  Q  R  V  Y  L  F  E  *  I  W  *  V  Y  I  L  *  L  Q  I  S  Y  T  E  I  Q  K  V  C  W  I  A  C  Y  R  I  L  P  S  S  C  Y  S  I  L  G  P  Y  Y  S  T  *  I  V  M  I  R  I  L  *  S  L  T  S  K  K  S  R  S  M  L  D  S  K  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81125" stop="81119"/>
                    <exon start="81026" stop="80847"/>
                    <exon start="78867" stop="78697"/>
                    <exon start="73329" stop="73274"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>411</number_coding_nucleotides>
                  <number_encoded_amino_acids>137</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YTGFGGEKTEKKEVGGRSQMPEEDLTEVKFRLFDGSDVGPFQFSPASTVAMLKERIVAEWPKDKKIAPKAANDVKLISAGKILENNKTVGQCKTPFGELPNGVITMHAVVQPSVGKSKSEKKIDETPKKSVCACTIM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="85523" PGL_stop="84908"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85523" e_stop="85442"/>
            <exon e_start="85242" e_stop="84908"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.939" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="85523" e_stop="85442" e_length="82"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.939">
            <gDNA_intron_boundary i_start="85441" i_stop="85243" i_length="199"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="85242" e_stop="84908" e_length="335"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85523" stop="85442"/>
              <exon start="85242" stop="84908"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U603692" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTACCTTTTCGACGACCCATGCATGTTGTAGTTGGTAGGCCAATTATGCTGGAGAAAAATCCAGAGCCAACCGTTGAAGAG : GTTTCTGAAGTGCATAGTCGATTTACTGAAGCAATGCAAGAACTATTTGAAAGGCACAAAAAGAGGGTTGGTTATGAAGATCTACCACTGAGAGTTGTTTAATGTTTATATGATAACTCTGCATTAATATGTATCTAAATCTTCTGGTTGTATTACTGCTTTTATTCATTATCTTTTCTTGTTTCCTCCATCTTCTTATGTGCATCTAACTCTAGTCATGGAGGAGAAAAGCAGTATGAATAGAAAAAAATAAATGATTATGAAATTTGCAGTCACTAATATGCTTGGATATGAAGAGAAAGACAGTTTGTATCTTACAAATTAATTTATCTACC</gDNA_template>
            <first_frame> G  T  F  S  T  T  H  A  C  C  S  W  *  A  N  Y  A  G  E  K  S  R  A  N  R  *  R   : G  F  *  S  A  *  S  I  Y  *  S  N  A  R  T  I  *  K  A  Q  K  E  G  W  L  *  R  S  T  T  E  S  C  L  M  F  I  *  *  L  C  I  N  M  Y  L  N  L  L  V  V  L  L  L  L  F  I  I  F  S  C  F  L  H  L  L  M  C  I  *  L  *  S  W  R  R  K  A  V  *  I  E  K  N  K  *  L  *  N  L  Q  S  L  I  C  L  D  M  K  R  K  T  V  C  I  L  Q  I  N  L  S  T </first_frame>
            <second_frame>  V  P  F  R  R  P  M  H  V  V  V  G  R  P  I  M  L  E  K  N  P  E  P  T  V  E  E  :  V  S  E  V  H  S  R  F  T  E  A  M  Q  E  L  F  E  R  H  K  K  R  V  G  Y  E  D  L  P  L  R  V  V  *  C  L  Y  D  N  S  A  L  I  C  I  *  I  F  W  L  Y  Y  C  F  Y  S  L  S  F  L  V  S  S  I  F  L  C  A  S  N  S  S  H  G  G  E  K  Q  Y  E  *  K  K  I  N  D  Y  E  I  C  S  H  *  Y  A  W  I  *  R  E  R  Q  F  V  S  Y  K  L  I  Y  L   </second_frame>
            <third_frame>   Y  L  F  D  D  P  C  M  L  *  L  V  G  Q  L  C  W  R  K  I  Q  S  Q  P  L  K  R :   F  L  K  C  I  V  D  L  L  K  Q  C  K  N  Y  L  K  G  T  K  R  G  L  V  M  K  I  Y  H  *  E  L  F  N  V  Y  M  I  T  L  H  *  Y  V  S  K  S  S  G  C  I  T  A  F  I  H  Y  L  F  L  F  P  P  S  S  Y  V  H  L  T  L  V  M  E  E  K  S  S  M  N  R  K  K  *  M  I  M  K  F  A  V  T  N  M  L  G  Y  E  E  K  D  S  L  Y  L  T  N  *  F  I  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0146O12.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="89888" PGL_stop="86435"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="89888" e_stop="89574"/>
            <exon e_start="89470" e_stop="89396"/>
            <exon e_start="89295" e_stop="89210"/>
            <exon e_start="87564" e_stop="87458"/>
            <exon e_start="87370" e_stop="87215"/>
            <exon e_start="86798" e_stop="86712"/>
            <exon e_start="86449" e_stop="86435"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.791" acc_prob="0.883" e_score="0.978"/>
          <exon-intron don_prob="0.994" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.890" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.052" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.369" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.967" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.978">
            <gDNA_exon_boundary e_start="89888" e_stop="89574" e_length="315"/>
          </exon>
          <intron i_serial="1" don_prob="0.791" acc_prob="0.883">
            <gDNA_intron_boundary i_start="89573" i_stop="89471" i_length="103"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="89470" e_stop="89396" e_length="75"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.974">
            <gDNA_intron_boundary i_start="89395" i_stop="89296" i_length="100"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="89295" e_stop="89210" e_length="86"/>
          </exon>
          <intron i_serial="3" don_prob="0.952" acc_prob="0.890">
            <gDNA_intron_boundary i_start="89209" i_stop="87565" i_length="1645"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="87564" e_stop="87458" e_length="107"/>
          </exon>
          <intron i_serial="4" don_prob="0.995" acc_prob="0.052">
            <gDNA_intron_boundary i_start="87457" i_stop="87371" i_length="87"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="87370" e_stop="87215" e_length="156"/>
          </exon>
          <intron i_serial="5" don_prob="0.969" acc_prob="0.369">
            <gDNA_intron_boundary i_start="87214" i_stop="86799" i_length="416"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="86798" e_stop="86712" e_length="87"/>
          </exon>
          <intron i_serial="6" don_prob="0.996" acc_prob="0.967">
            <gDNA_intron_boundary i_start="86711" i_stop="86450" i_length="262"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="86449" e_stop="86435" e_length="15"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89888" stop="89574"/>
              <exon start="89470" stop="89396"/>
              <exon start="89295" stop="89210"/>
              <exon start="87564" stop="87458"/>
              <exon start="87370" stop="87215"/>
              <exon start="86798" stop="86712"/>
              <exon start="86449" stop="86435"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585747" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAAATTAGCTACTGCATAATTCCCTACTTTCTTTCTATAAATTTATAATCAATTCAGTAATTTCATATTTATTTTTTTCTGTTTTATTCGTTTCGATTTGGATTTTCACCCATGGCTATACAAGAGGATAATTCAATAATTCATCAACAGCCGGCGCCGCCGTCAGCTCCGACGCCGGTGGAGTTTAAAGGGGCAAATTCCGGGTCATTATTGCATACTGTATTGGCGTTGGTCTTATGGCTTGGCTCCGTCCATTTCAACTTCTTAATACTTATTGCTTCCTTTATTTTTCTTCCTTTCTCTAAAACAGTCAT : AGTTATAGGAATATTGCTTATACTTATTCTCATTCCGATTGATGAGAAAAATAATTTTGGGCGAAGATTAGCTAG : GTACATCTGTAAGCATGCTTGTGGCTATTTTCCGGTCCATTTGTATGTAGAGGATATCAAAGCATTTGATCCTAATGAGGCTTACG : TTTTTGGGTATGAACCACATTCTGTTTGGCCTATTGGGGCGGTTGCCCTTGCTGATCTTACAGGTTTCATGCCTCTCCCAAAAATCAAAGTGCTTGCGAGTACTGCT : GTGTTTTATACACCTTTCTTGCGGCATATCTGGACATGGTTAGGACTTGCACCAATAACAAGGAAAAATTTTAAATCCCTCTTGGCATCTGGTTACAGCTGCATCATAGTGCCAGGTGGAGTTCAAGAAACATTCTATATGGAACACGGTTCAGAG : ATTGCTTACCTTCAAAAAAGAAAAGGATTTGTACGAATTGCAATAGAGACGGGCAAACCACTGGTTCCAGTTTTCTGTTTTGGTCAG : ACTGCTATCTATAAA</gDNA_template>
            <first_frame> R  N  *  L  L  H  N  S  L  L  S  F  Y  K  F  I  I  N  S  V  I  S  Y  L  F  F  S  V  L  F  V  S  I  W  I  F  T  H  G  Y  T  R  G  *  F  N  N  S  S  T  A  G  A  A  V  S  S  D  A  G  G  V  *  R  G  K  F  R  V  I  I  A  Y  C  I  G  V  G  L  M  A  W  L  R  P  F  Q  L  L  N  T  Y  C  F  L  Y  F  S  S  F  L  *  N  S  H  :  S  Y  R  N  I  A  Y  T  Y  S  H  S  D  *  *  E  K  *  F  W  A  K  I  S  *  :  V  H  L  *  A  C  L  W  L  F  S  G  P  F  V  C  R  G  Y  Q  S  I  *  S  *  *  G  L  R :   F  W  V  *  T  T  F  C  L  A  Y  W  G  G  C  P  C  *  S  Y  R  F  H  A  S  P  K  N  Q  S  A  C  E  Y  C   : C  V  L  Y  T  F  L  A  A  Y  L  D  M  V  R  T  C  T  N  N  K  E  K  F  *  I  P  L  G  I  W  L  Q  L  H  H  S  A  R  W  S  S  R  N  I  L  Y  G  T  R  F  R   : D  C  L  P  S  K  K  K  R  I  C  T  N  C  N  R  D  G  Q  T  T  G  S  S  F  L  F  W  S   : D  C  Y  L  *  </first_frame>
            <second_frame>  E  I  S  Y  C  I  I  P  Y  F  L  S  I  N  L  *  S  I  Q  *  F  H  I  Y  F  F  L  F  Y  S  F  R  F  G  F  S  P  M  A  I  Q  E  D  N  S  I  I  H  Q  Q  P  A  P  P  S  A  P  T  P  V  E  F  K  G  A  N  S  G  S  L  L  H  T  V  L  A  L  V  L  W  L  G  S  V  H  F  N  F  L  I  L  I  A  S  F  I  F  L  P  F  S  K  T  V  I :   V  I  G  I  L  L  I  L  I  L  I  P  I  D  E  K  N  N  F  G  R  R  L  A  R :   Y  I  C  K  H  A  C  G  Y  F  P  V  H  L  Y  V  E  D  I  K  A  F  D  P  N  E  A  Y   : V  F  G  Y  E  P  H  S  V  W  P  I  G  A  V  A  L  A  D  L  T  G  F  M  P  L  P  K  I  K  V  L  A  S  T  A  :  V  F  Y  T  P  F  L  R  H  I  W  T  W  L  G  L  A  P  I  T  R  K  N  F  K  S  L  L  A  S  G  Y  S  C  I  I  V  P  G  G  V  Q  E  T  F  Y  M  E  H  G  S  E  :  I  A  Y  L  Q  K  R  K  G  F  V  R  I  A  I  E  T  G  K  P  L  V  P  V  F  C  F  G  Q  :  T  A  I  Y  K </second_frame>
            <third_frame>   K  L  A  T  A  *  F  P  T  F  F  L  *  I  Y  N  Q  F  S  N  F  I  F  I  F  F  C  F  I  R  F  D  L  D  F  H  P  W  L  Y  K  R  I  I  Q  *  F  I  N  S  R  R  R  R  Q  L  R  R  R  W  S  L  K  G  Q  I  P  G  H  Y  C  I  L  Y  W  R  W  S  Y  G  L  A  P  S  I  S  T  S  *  Y  L  L  L  P  L  F  F  F  L  S  L  K  Q  S   : *  L  *  E  Y  C  L  Y  L  F  S  F  R  L  M  R  K  I  I  L  G  E  D  *  L   : G  T  S  V  S  M  L  V  A  I  F  R  S  I  C  M  *  R  I  S  K  H  L  I  L  M  R  L  T  :  F  L  G  M  N  H  I  L  F  G  L  L  G  R  L  P  L  L  I  L  Q  V  S  C  L  S  Q  K  S  K  C  L  R  V  L  L :   C  F  I  H  L  S  C  G  I  S  G  H  G  *  D  L  H  Q  *  Q  G  K  I  L  N  P  S  W  H  L  V  T  A  A  S  *  C  Q  V  E  F  K  K  H  S  I  W  N  T  V  Q  R :   L  L  T  F  K  K  E  K  D  L  Y  E  L  Q  *  R  R  A  N  H  W  F  Q  F  S  V  L  V  R :   L  L  S  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89827" stop="89574"/>
                    <exon start="89470" stop="89396"/>
                    <exon start="89295" stop="89210"/>
                    <exon start="87564" stop="87458"/>
                    <exon start="87370" stop="87215"/>
                    <exon start="86798" stop="86712"/>
                    <exon start="86449" stop="86435"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>780</number_coding_nucleotides>
                  <number_encoded_amino_acids>260</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FHIYFFLFYSFRFGFSPMAIQEDNSIIHQQPAPPSAPTPVEFKGANSGSLLHTVLALVLWLGSVHFNFLILIASFIFLPFSKTVIVIGILLILILIPIDEKNNFGRRLARYICKHACGYFPVHLYVEDIKAFDPNEAYVFGYEPHSVWPIGAVALADLTGFMPLPKIKVLASTAVFYTPFLRHIWTWLGLAPITRKNFKSLLASGYSCIIVPGGVQETFYMEHGSEIAYLQKRKGFVRIAIETGKPLVPVFCFGQTAIYK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="103351" PGL_stop="100464"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="103351" e_stop="102916"/>
            <exon e_start="102816" e_stop="102700"/>
            <exon e_start="101764" e_stop="100504"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.695" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="103351" e_stop="102916" e_length="436"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.954">
            <gDNA_intron_boundary i_start="102915" i_stop="102817" i_length="99"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="102816" e_stop="102700" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.695">
            <gDNA_intron_boundary i_start="102699" i_stop="101765" i_length="935"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="101764" e_stop="100504" e_length="1261"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103351" stop="102916"/>
              <exon start="102816" stop="102700"/>
              <exon start="101764" stop="100504"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586244" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAGTGAACCTCTTTATCTCTTATTCACAATTGATTGCCATATTCCACCATGAAAATATACAGTGCAAAAAACATCAACAAAAATGGTGGCATTAGCTTCTTCATCTCTCTGCAATTCCCCTTCTTCAATTATCCATTCCTCAAAAACATCTATACCCAATTTCATTACATTCTCTTCCTTAAGTTATTACAAGAAAAGGGGAAAATCGCTTGCAAGTCGTAGCCTTGGAATTGTTGCTGCTACTGAAGGTTCTGTTAACAAATCTAGTGGAAAAGATGAGGAAAAACAAGAAGACCCATCAGTTCCTACATGGGCTAAACCCGGTACGGATGAGCCTCCACCATGGGCTAGAAATGAAGCACAGAAAGATTCTTCAAGCATTCAAGTTCCATTCGTTGTTTATTTGCTTGCTTCTGCTGTCACAGCAATTGCAGCG : ATTGGTTCTATTTTCGAGTACACGAATCAGAAACCTGTGTTTGGAGTTTTGGGTTCAGATAGTGTTTTTTATGCTCCATTGCTTGGGTTCTTTGTGTTCACTGGCATTCCCACTTCT : GCATTCCTTTGGTTCAAATCAGTACAAGTTGCTAACAAGGAGGCTGAGGAACAAGACCGCAGGGATGGATATATGTAACATCTAATATGCAATCTTTAGGTGATATCTGCAGCATCTTATATGCATTTTTCAGATGTTGTTGATGGTTGTTTCCTAAAATACTATCATCGCAAATGAATACTTTCTCGAGGTTTGTTCTTTCTAGAGCAGCATGAGTGTAAAAATTGTCTTCTCAATACCAGTTATTCCGCTTTATCAATTCTAAAAGTCTTTAATCACCAGATTTGACTATTTCCATCTCTCATTTGAAAAAATAGTTTATCGATTTGTGGTTAGACAAGTTACTTGCTGATCTTTTGGCACAACTTGTGTAAGTTATCCACCAATCTGGTGTTGCTTCTTAACTCTTAACATATCGACCTTGGTAAATCACTAATTCTCTATCTTGTCCCTCACTACCAAGACTTAGGAGCTTGAGGCTTTGGTTCACAACGTATTTACTAATAAGTTGTAATAAATAGTCAAAAGAATATTCAAATAGGTCCTGTGAGTTAAATACATAGCATAACTTACAAGTTCAGTCTACTCTCATTTTGATGGTATATCAGCACTTATTCCTTCCTCTTATTTATTAAGTGAACGAAAAAAGTTCACACTCTAATAGCATCATAGCATGTATTGTCTGCTTGCCTTCACATGTCTTTTTGGTTTCAAGTGTTTGTACCTAAGAAACCAGCAAGTCATTTGTTTCTTGGAATTGAGTAGTGATATCTGCAGAATGGTTTGATACTACATTCTACATGTTGTATTTCATTTCTTTGAAATAGGATCGATATAGTTCTTAATCTGAAGACTATCTCTAAAGTATGCTTATATTGCTTTAGTTTACTGTTTCTCATTTTTGTAGTATCTGCCTGAGAATTTCTTGAAAAACTGATCGCGAGCTAGTAAAAAAAAATGTTCAGTCGTTCCACAACATTCTCTCTCCTTCCTCGTTGTGCTATCACACAGAACTCTGAATTTTGCAGTCTACTTCCTTTGAGCTTTTCAACTCTCTGGGGCGGTGAAGTTCATCCATTTCTCCAAGAGAAGAGAAAAGATAGGGAAGCAACATCATATGAAGTCATGTGAACACAACTTTTGTCCCTGTAGGGAGGACAATTGTATTTTTCCCTCAGAAATGAACTTTAATATAGAAATATGTCATGGGCATTTCGAATCAGAAAGGAACTTCAATATAGAAATATGTCATGGGCATTTC</gDNA_template>
            <first_frame> E  *  T  S  L  S  L  I  H  N  *  L  P  Y  S  T  M  K  I  Y  S  A  K  N  I  N  K  N  G  G  I  S  F  F  I  S  L  Q  F  P  F  F  N  Y  P  F  L  K  N  I  Y  T  Q  F  H  Y  I  L  F  L  K  L  L  Q  E  K  G  K  I  A  C  K  S  *  P  W  N  C  C  C  Y  *  R  F  C  *  Q  I  *  W  K  R  *  G  K  T  R  R  P  I  S  S  Y  M  G  *  T  R  Y  G  *  A  S  T  M  G  *  K  *  S  T  E  R  F  F  K  H  S  S  S  I  R  C  L  F  A  C  F  C  C  H  S  N  C  S   : D  W  F  Y  F  R  V  H  E  S  E  T  C  V  W  S  F  G  F  R  *  C  F  L  C  S  I  A  W  V  L  C  V  H  W  H  S  H  F   : C  I  P  L  V  Q  I  S  T  S  C  *  Q  G  G  *  G  T  R  P  Q  G  W  I  Y  V  T  S  N  M  Q  S  L  G  D  I  C  S  I  L  Y  A  F  F  R  C  C  *  W  L  F  P  K  I  L  S  S  Q  M  N  T  F  S  R  F  V  L  S  R  A  A  *  V  *  K  L  S  S  Q  Y  Q  L  F  R  F  I  N  S  K  S  L  *  S  P  D  L  T  I  S  I  S  H  L  K  K  *  F  I  D  L  W  L  D  K  L  L  A  D  L  L  A  Q  L  V  *  V  I  H  Q  S  G  V  A  S  *  L  L  T  Y  R  P  W  *  I  T  N  S  L  S  C  P  S  L  P  R  L  R  S  L  R  L  W  F  T  T  Y  L  L  I  S  C  N  K  *  S  K  E  Y  S  N  R  S  C  E  L  N  T  *  H  N  L  Q  V  Q  S  T  L  I  L  M  V  Y  Q  H  L  F  L  P  L  I  Y  *  V  N  E  K  S  S  H  S  N  S  I  I  A  C  I  V  C  L  P  S  H  V  F  L  V  S  S  V  C  T  *  E  T  S  K  S  F  V  S  W  N  *  V  V  I  S  A  E  W  F  D  T  T  F  Y  M  L  Y  F  I  S  L  K  *  D  R  Y  S  S  *  S  E  D  Y  L  *  S  M  L  I  L  L  *  F  T  V  S  H  F  C  S  I  C  L  R  I  S  *  K  T  D  R  E  L  V  K  K  N  V  Q  S  F  H  N  I  L  S  P  S  S  L  C  Y  H  T  E  L  *  I  L  Q  S  T  S  F  E  L  F  N  S  L  G  R  *  S  S  S  I  S  P  R  E  E  K  R  *  G  S  N  I  I  *  S  H  V  N  T  T  F  V  P  V  G  R  T  I  V  F  F  P  Q  K  *  T  L  I  *  K  Y  V  M  G  I  S  N  Q  K  G  T  S  I  *  K  Y  V  M  G  I   </first_frame>
            <second_frame>  S  E  P  L  Y  L  L  F  T  I  D  C  H  I  P  P  *  K  Y  T  V  Q  K  T  S  T  K  M  V  A  L  A  S  S  S  L  C  N  S  P  S  S  I  I  H  S  S  K  T  S  I  P  N  F  I  T  F  S  S  L  S  Y  Y  K  K  R  G  K  S  L  A  S  R  S  L  G  I  V  A  A  T  E  G  S  V  N  K  S  S  G  K  D  E  E  K  Q  E  D  P  S  V  P  T  W  A  K  P  G  T  D  E  P  P  P  W  A  R  N  E  A  Q  K  D  S  S  S  I  Q  V  P  F  V  V  Y  L  L  A  S  A  V  T  A  I  A  A  :  I  G  S  I  F  E  Y  T  N  Q  K  P  V  F  G  V  L  G  S  D  S  V  F  Y  A  P  L  L  G  F  F  V  F  T  G  I  P  T  S  :  A  F  L  W  F  K  S  V  Q  V  A  N  K  E  A  E  E  Q  D  R  R  D  G  Y  M  *  H  L  I  C  N  L  *  V  I  S  A  A  S  Y  M  H  F  S  D  V  V  D  G  C  F  L  K  Y  Y  H  R  K  *  I  L  S  R  G  L  F  F  L  E  Q  H  E  C  K  N  C  L  L  N  T  S  Y  S  A  L  S  I  L  K  V  F  N  H  Q  I  *  L  F  P  S  L  I  *  K  N  S  L  S  I  C  G  *  T  S  Y  L  L  I  F  W  H  N  L  C  K  L  S  T  N  L  V  L  L  L  N  S  *  H  I  D  L  G  K  S  L  I  L  Y  L  V  P  H  Y  Q  D  L  G  A  *  G  F  G  S  Q  R  I  Y  *  *  V  V  I  N  S  Q  K  N  I  Q  I  G  P  V  S  *  I  H  S  I  T  Y  K  F  S  L  L  S  F  *  W  Y  I  S  T  Y  S  F  L  L  F  I  K  *  T  K  K  V  H  T  L  I  A  S  *  H  V  L  S  A  C  L  H  M  S  F  W  F  Q  V  F  V  P  K  K  P  A  S  H  L  F  L  G  I  E  *  *  Y  L  Q  N  G  L  I  L  H  S  T  C  C  I  S  F  L  *  N  R  I  D  I  V  L  N  L  K  T  I  S  K  V  C  L  Y  C  F  S  L  L  F  L  I  F  V  V  S  A  *  E  F  L  E  K  L  I  A  S  *  *  K  K  M  F  S  R  S  T  T  F  S  L  L  P  R  C  A  I  T  Q  N  S  E  F  C  S  L  L  P  L  S  F  S  T  L  W  G  G  E  V  H  P  F  L  Q  E  K  R  K  D  R  E  A  T  S  Y  E  V  M  *  T  Q  L  L  S  L  *  G  G  Q  L  Y  F  S  L  R  N  E  L  *  Y  R  N  M  S  W  A  F  R  I  R  K  E  L  Q  Y  R  N  M  S  W  A  F  </second_frame>
            <third_frame>   V  N  L  F  I  S  Y  S  Q  L  I  A  I  F  H  H  E  N  I  Q  C  K  K  H  Q  Q  K  W  W  H  *  L  L  H  L  S  A  I  P  L  L  Q  L  S  I  P  Q  K  H  L  Y  P  I  S  L  H  S  L  P  *  V  I  T  R  K  G  E  N  R  L  Q  V  V  A  L  E  L  L  L  L  L  K  V  L  L  T  N  L  V  E  K  M  R  K  N  K  K  T  H  Q  F  L  H  G  L  N  P  V  R  M  S  L  H  H  G  L  E  M  K  H  R  K  I  L  Q  A  F  K  F  H  S  L  F  I  C  L  L  L  L  S  Q  Q  L  Q  R :   L  V  L  F  S  S  T  R  I  R  N  L  C  L  E  F  W  V  Q  I  V  F  F  M  L  H  C  L  G  S  L  C  S  L  A  F  P  L  L :   H  S  F  G  S  N  Q  Y  K  L  L  T  R  R  L  R  N  K  T  A  G  M  D  I  C  N  I  *  Y  A  I  F  R  *  Y  L  Q  H  L  I  C  I  F  Q  M  L  L  M  V  V  S  *  N  T  I  I  A  N  E  Y  F  L  E  V  C  S  F  *  S  S  M  S  V  K  I  V  F  S  I  P  V  I  P  L  Y  Q  F  *  K  S  L  I  T  R  F  D  Y  F  H  L  S  F  E  K  I  V  Y  R  F  V  V  R  Q  V  T  C  *  S  F  G  T  T  C  V  S  Y  P  P  I  W  C  C  F  L  T  L  N  I  S  T  L  V  N  H  *  F  S  I  L  S  L  T  T  K  T  *  E  L  E  A  L  V  H  N  V  F  T  N  K  L  *  *  I  V  K  R  I  F  K  *  V  L  *  V  K  Y  I  A  *  L  T  S  S  V  Y  S  H  F  D  G  I  S  A  L  I  P  S  S  Y  L  L  S  E  R  K  K  F  T  L  *  *  H  H  S  M  Y  C  L  L  A  F  T  C  L  F  G  F  K  C  L  Y  L  R  N  Q  Q  V  I  C  F  L  E  L  S  S  D  I  C  R  M  V  *  Y  Y  I  L  H  V  V  F  H  F  F  E  I  G  S  I  *  F  L  I  *  R  L  S  L  K  Y  A  Y  I  A  L  V  Y  C  F  S  F  L  *  Y  L  P  E  N  F  L  K  N  *  S  R  A  S  K  K  K  C  S  V  V  P  Q  H  S  L  S  F  L  V  V  L  S  H  R  T  L  N  F  A  V  Y  F  L  *  A  F  Q  L  S  G  A  V  K  F  I  H  F  S  K  R  R  E  K  I  G  K  Q  H  H  M  K  S  C  E  H  N  F  C  P  C  R  E  D  N  C  I  F  P  S  E  M  N  F  N  I  E  I  C  H  G  H  F  E  S  E  R  N  F  N  I  E  I  C  H  G  H  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="103299" stop="102916"/>
                    <exon start="102816" stop="102700"/>
                    <exon start="101764" stop="101687"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>576</number_coding_nucleotides>
                  <number_encoded_amino_acids>192</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KYTVQKTSTKMVALASSSLCNSPSSIIHSSKTSIPNFITFSSLSYYKKRGKSLASRSLGIVAATEGSVNKSSGKDEEKQEDPSVPTWAKPGTDEPPPWARNEAQKDSSSIQVPFVVYLLASAVTAIAAIGSIFEYTNQKPVFGVLGSDSVFYAPLLGFFVFTGIPTSAFLWFKSVQVANKEAEEQDRRDGYM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100722" stop="100504"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AFQLSGAVKFIHFSKRREKIGKQHHMKSCEHNFCPCREDNCIFPSEMNFNIEICHGHFESERNFNIEICHGHF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="103244" e_stop="102916"/>
            <exon e_start="102816" e_stop="102700"/>
            <exon e_start="101764" e_stop="101691"/>
            <exon e_start="100736" e_stop="100464"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.695" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.568" e_score="1.000"/>
          <exon-only e_score="0.949"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="103244" e_stop="102916" e_length="329"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.954">
            <gDNA_intron_boundary i_start="102915" i_stop="102817" i_length="99"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="102816" e_stop="102700" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.695">
            <gDNA_intron_boundary i_start="102699" i_stop="101765" i_length="935"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="101764" e_stop="101691" e_length="74"/>
          </exon>
          <intron i_serial="3" don_prob="0.985" acc_prob="0.568">
            <gDNA_intron_boundary i_start="101690" i_stop="100737" i_length="954"/>
          </intron>
          <exon e_serial="4" e_score="0.949">
            <gDNA_exon_boundary e_start="100736" e_stop="100464" e_length="273"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103244" stop="102916"/>
              <exon start="102816" stop="102700"/>
              <exon start="101764" stop="101691"/>
              <exon start="100736" stop="100464"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587018" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTGCAATTCCCCTTCTTCAATTATCCATTCCTCAAAAACATCTATACCCAATTTCATTACATTCTCTTCCTTAAGTTATTACAAGAAAAGGGGAAAATCGCTTGCAAGTCGTAGCCTTGGAATTGTTGCTGCTACTGAAGGTTCTGTTAACAAATCTAGTGGAAAAGATGAGGAAAAACAAGAAGACCCATCAGTTCCTACATGGGCTAAACCCGGTACGGATGAGCCTCCACCATGGGCTAGAAATGAAGCACAGAAAGATTCTTCAAGCATTCAAGTTCCATTCGTTGTTTATTTGCTTGCTTCTGCTGTCACAGCAATTGCAGCG : ATTGGTTCTATTTTCGAGTACACGAATCAGAAACCTGTGTTTGGAGTTTTGGGTTCAGATAGTGTTTTTTATGCTCCATTGCTTGGGTTCTTTGTGTTCACTGGCATTCCCACTTCT : GCATTCCTTTGGTTCAAATCAGTACAAGTTGCTAACAAGGAGGCTGAGGAACAAGACCGCAGGGATGGATATAT : TCTACTTCCTTTGAGCTTTTCAACTCTCTGGGGCGGTGAAGTTCATCCATTTCTCCAAGAGAAGAGAAAAGATAGGGAAGCAACATCATATGAAGTCATGTGAACACAACTTTTGTCCCTGTAGGGAGGACAATTGTATTTTTCCCTCAGAAATGAACTTTAATATAGAAATATGTCATGGGCATTTCGAATCAGAAAGGAACTTCAATATAGAAATATGTCATGGGCATTTCAAATATAAATGCATAGTGATTGCACTCAAACTATTTGGCT</gDNA_template>
            <first_frame> S  A  I  P  L  L  Q  L  S  I  P  Q  K  H  L  Y  P  I  S  L  H  S  L  P  *  V  I  T  R  K  G  E  N  R  L  Q  V  V  A  L  E  L  L  L  L  L  K  V  L  L  T  N  L  V  E  K  M  R  K  N  K  K  T  H  Q  F  L  H  G  L  N  P  V  R  M  S  L  H  H  G  L  E  M  K  H  R  K  I  L  Q  A  F  K  F  H  S  L  F  I  C  L  L  L  L  S  Q  Q  L  Q  R :   L  V  L  F  S  S  T  R  I  R  N  L  C  L  E  F  W  V  Q  I  V  F  F  M  L  H  C  L  G  S  L  C  S  L  A  F  P  L  L :   H  S  F  G  S  N  Q  Y  K  L  L  T  R  R  L  R  N  K  T  A  G  M  D  I   : F  Y  F  L  *  A  F  Q  L  S  G  A  V  K  F  I  H  F  S  K  R  R  E  K  I  G  K  Q  H  H  M  K  S  C  E  H  N  F  C  P  C  R  E  D  N  C  I  F  P  S  E  M  N  F  N  I  E  I  C  H  G  H  F  E  S  E  R  N  F  N  I  E  I  C  H  G  H  F  K  Y  K  C  I  V  I  A  L  K  L  F  G  </first_frame>
            <second_frame>  L  Q  F  P  F  F  N  Y  P  F  L  K  N  I  Y  T  Q  F  H  Y  I  L  F  L  K  L  L  Q  E  K  G  K  I  A  C  K  S  *  P  W  N  C  C  C  Y  *  R  F  C  *  Q  I  *  W  K  R  *  G  K  T  R  R  P  I  S  S  Y  M  G  *  T  R  Y  G  *  A  S  T  M  G  *  K  *  S  T  E  R  F  F  K  H  S  S  S  I  R  C  L  F  A  C  F  C  C  H  S  N  C  S   : D  W  F  Y  F  R  V  H  E  S  E  T  C  V  W  S  F  G  F  R  *  C  F  L  C  S  I  A  W  V  L  C  V  H  W  H  S  H  F   : C  I  P  L  V  Q  I  S  T  S  C  *  Q  G  G  *  G  T  R  P  Q  G  W  I  Y  :  S  T  S  F  E  L  F  N  S  L  G  R  *  S  S  S  I  S  P  R  E  E  K  R  *  G  S  N  I  I  *  S  H  V  N  T  T  F  V  P  V  G  R  T  I  V  F  F  P  Q  K  *  T  L  I  *  K  Y  V  M  G  I  S  N  Q  K  G  T  S  I  *  K  Y  V  M  G  I  S  N  I  N  A  *  *  L  H  S  N  Y  L  A </second_frame>
            <third_frame>   C  N  S  P  S  S  I  I  H  S  S  K  T  S  I  P  N  F  I  T  F  S  S  L  S  Y  Y  K  K  R  G  K  S  L  A  S  R  S  L  G  I  V  A  A  T  E  G  S  V  N  K  S  S  G  K  D  E  E  K  Q  E  D  P  S  V  P  T  W  A  K  P  G  T  D  E  P  P  P  W  A  R  N  E  A  Q  K  D  S  S  S  I  Q  V  P  F  V  V  Y  L  L  A  S  A  V  T  A  I  A  A  :  I  G  S  I  F  E  Y  T  N  Q  K  P  V  F  G  V  L  G  S  D  S  V  F  Y  A  P  L  L  G  F  F  V  F  T  G  I  P  T  S  :  A  F  L  W  F  K  S  V  Q  V  A  N  K  E  A  E  E  Q  D  R  R  D  G  Y  I :   L  L  P  L  S  F  S  T  L  W  G  G  E  V  H  P  F  L  Q  E  K  R  K  D  R  E  A  T  S  Y  E  V  M  *  T  Q  L  L  S  L  *  G  G  Q  L  Y  F  S  L  R  N  E  L  *  Y  R  N  M  S  W  A  F  R  I  R  K  E  L  Q  Y  R  N  M  S  W  A  F  Q  I  *  M  H  S  D  C  T  Q  T  I  W   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="103242" stop="102916"/>
                    <exon start="102816" stop="102700"/>
                    <exon start="101764" stop="101691"/>
                    <exon start="100736" stop="100634"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>618</number_coding_nucleotides>
                  <number_encoded_amino_acids>206</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CNSPSSIIHSSKTSIPNFITFSSLSYYKKRGKSLASRSLGIVAATEGSVNKSSGKDEEKQEDPSVPTWAKPGTDEPPPWARNEAQKDSSSIQVPFVVYLLASAVTAIAAIGSIFEYTNQKPVFGVLGSDSVFYAPLLGFFVFTGIPTSAFLWFKSVQVANKEAEEQDRRDGYILLPLSFSTLWGGEVHPFLQEKRKDREATSYEVM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="113794" PGL_stop="118283"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="113794" e_stop="114186"/>
            <exon e_start="114277" e_stop="114374"/>
            <exon e_start="114471" e_stop="114568"/>
            <exon e_start="114660" e_stop="114818"/>
            <exon e_start="115376" e_stop="115487"/>
            <exon e_start="115573" e_stop="115708"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.267" acc_prob="0.994" e_score="0.977"/>
          <exon-intron don_prob="0.989" acc_prob="0.932" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.975" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.850" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.986" e_score="0.991"/>
          <exon-only e_score="0.912"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.977">
            <gDNA_exon_boundary e_start="113794" e_stop="114186" e_length="393"/>
          </exon>
          <intron i_serial="1" don_prob="0.267" acc_prob="0.994">
            <gDNA_intron_boundary i_start="114187" i_stop="114276" i_length="90"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="114277" e_stop="114374" e_length="98"/>
          </exon>
          <intron i_serial="2" don_prob="0.989" acc_prob="0.932">
            <gDNA_intron_boundary i_start="114375" i_stop="114470" i_length="96"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="114471" e_stop="114568" e_length="98"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.975">
            <gDNA_intron_boundary i_start="114569" i_stop="114659" i_length="91"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="114660" e_stop="114818" e_length="159"/>
          </exon>
          <intron i_serial="4" don_prob="0.980" acc_prob="0.850">
            <gDNA_intron_boundary i_start="114819" i_stop="115375" i_length="557"/>
          </intron>
          <exon e_serial="5" e_score="0.991">
            <gDNA_exon_boundary e_start="115376" e_stop="115487" e_length="112"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.986">
            <gDNA_intron_boundary i_start="115488" i_stop="115572" i_length="85"/>
          </intron>
          <exon e_serial="6" e_score="0.912">
            <gDNA_exon_boundary e_start="115573" e_stop="115708" e_length="136"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113794" stop="114186"/>
              <exon start="114277" stop="114374"/>
              <exon start="114471" stop="114568"/>
              <exon start="114660" stop="114818"/>
              <exon start="115376" stop="115487"/>
              <exon start="115573" stop="115708"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566125" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCACGTTTCCATTTTCTTTTGTCTAAGCAATCGCGAAAAAAATTATTTAAGAGATCGAATATGATTATATGAAATATCTCTTAATTTTATCCGACGCAGTACGTTAATGGAAATATATTTTGTCTACTACTATTACACAGTATACCTGTGACTGAATAATCTCTTTCTCTTTCTCTCTCCCTCTCCTCTTTATTTTCAAATCATTCTCTCTCTCTGTGTGTCTTGTTCTGCTATAAAAAACCTCATCTTTTTTTTTTTCATCTTGTAGTTGATAATACATTCTTTTACTAGCCTTATACATCAAGATAGGAGATGGGTGTTTCAAAAAAGACTCTTTTTTTACTATTTGTTAGTGTTTTTCTTGGAGAAATTAGTCTCTGCTCTTCTACCAAG : TTATATGTGGTGTACATGGGAAGCAAAGATAGTGATGAGCATCAAGATGAGATTTTGAGGCAAAACCATCAAATGCTTACTGATATTCATGGAGGAAA : TGTTGAACAAGCCAAGAGTTCTCATGTATACAGTTATAGACATGGTTTTAAAGGCTTTGCAGCCAAGTTGACTGAGAAACAGGCTTCTGAAATATCTA : AAATGCCTGGTGTGGTATCTGTATTTCCAAATACTAAGAGAAACCTGCATACAACTCATTCATGGGATTTTATGGGGCTCAGTGAAGATGAAACAATGGAAATCCCAGGTTTTTCCACCAAGAACCAAGTTAATGTAATCATTGGTTTCATTGATACAG : GAATTTGGCCTGAGTCTCCAAGTTTTAGGGACACCCACATGCCTCCAGTGCCTGCTGGATGGAAAGGACAATGCCAATCAGGGGAAGCATTCAATGCCTCAATATGCAACAG : GAAAATAATTGGGGCAAGATATTATATGAGTGGCTATGCAGCTGAAGAAGATGAAAAGATCATGTTCAAGTCTGCCAGGGACAGTTCTGGTCATGGAAGTCATACAGCTTCAACTGCTGCTGGGCGTTATGTAGCT</gDNA_template>
            <first_frame> S  R  F  H  F  L  L  S  K  Q  S  R  K  K  L  F  K  R  S  N  M  I  I  *  N  I  S  *  F  Y  P  T  Q  Y  V  N  G  N  I  F  C  L  L  L  L  H  S  I  P  V  T  E  *  S  L  S  L  S  L  S  L  S  S  L  F  S  N  H  S  L  S  L  C  V  L  F  C  Y  K  K  P  H  L  F  F  F  H  L  V  V  D  N  T  F  F  Y  *  P  Y  T  S  R  *  E  M  G  V  S  K  K  T  L  F  L  L  F  V  S  V  F  L  G  E  I  S  L  C  S  S  T  K  :  L  Y  V  V  Y  M  G  S  K  D  S  D  E  H  Q  D  E  I  L  R  Q  N  H  Q  M  L  T  D  I  H  G  G  N :   V  E  Q  A  K  S  S  H  V  Y  S  Y  R  H  G  F  K  G  F  A  A  K  L  T  E  K  Q  A  S  E  I  S   : K  M  P  G  V  V  S  V  F  P  N  T  K  R  N  L  H  T  T  H  S  W  D  F  M  G  L  S  E  D  E  T  M  E  I  P  G  F  S  T  K  N  Q  V  N  V  I  I  G  F  I  D  T   : G  I  W  P  E  S  P  S  F  R  D  T  H  M  P  P  V  P  A  G  W  K  G  Q  C  Q  S  G  E  A  F  N  A  S  I  C  N  R :   K  I  I  G  A  R  Y  Y  M  S  G  Y  A  A  E  E  D  E  K  I  M  F  K  S  A  R  D  S  S  G  H  G  S  H  T  A  S  T  A  A  G  R  Y  V  A </first_frame>
            <second_frame>  H  V  S  I  F  F  C  L  S  N  R  E  K  N  Y  L  R  D  R  I  *  L  Y  E  I  S  L  N  F  I  R  R  S  T  L  M  E  I  Y  F  V  Y  Y  Y  Y  T  V  Y  L  *  L  N  N  L  F  L  F  L  S  P  S  P  L  Y  F  Q  I  I  L  S  L  C  V  S  C  S  A  I  K  N  L  I  F  F  F  F  I  L  *  L  I  I  H  S  F  T  S  L  I  H  Q  D  R  R  W  V  F  Q  K  R  L  F  F  Y  Y  L  L  V  F  F  L  E  K  L  V  S  A  L  L  P  S :   Y  M  W  C  T  W  E  A  K  I  V  M  S  I  K  M  R  F  *  G  K  T  I  K  C  L  L  I  F  M  E  E   : M  L  N  K  P  R  V  L  M  Y  T  V  I  D  M  V  L  K  A  L  Q  P  S  *  L  R  N  R  L  L  K  Y  L  :  K  C  L  V  W  Y  L  Y  F  Q  I  L  R  E  T  C  I  Q  L  I  H  G  I  L  W  G  S  V  K  M  K  Q  W  K  S  Q  V  F  P  P  R  T  K  L  M  *  S  L  V  S  L  I  Q  :  E  F  G  L  S  L  Q  V  L  G  T  P  T  C  L  Q  C  L  L  D  G  K  D  N  A  N  Q  G  K  H  S  M  P  Q  Y  A  T   : G  K  *  L  G  Q  D  I  I  *  V  A  M  Q  L  K  K  M  K  R  S  C  S  S  L  P  G  T  V  L  V  M  E  V  I  Q  L  Q  L  L  L  G  V  M  *   </second_frame>
            <third_frame>   T  F  P  F  S  F  V  *  A  I  A  K  K  I  I  *  E  I  E  Y  D  Y  M  K  Y  L  L  I  L  S  D  A  V  R  *  W  K  Y  I  L  S  T  T  I  T  Q  Y  T  C  D  *  I  I  S  F  S  F  S  L  P  L  L  F  I  F  K  S  F  S  L  S  V  C  L  V  L  L  *  K  T  S  S  F  F  F  S  S  C  S  *  *  Y  I  L  L  L  A  L  Y  I  K  I  G  D  G  C  F  K  K  D  S  F  F  T  I  C  *  C  F  S  W  R  N  *  S  L  L  F  Y  Q   : V  I  C  G  V  H  G  K  Q  R  *  *  *  A  S  R  *  D  F  E  A  K  P  S  N  A  Y  *  Y  S  W  R  K  :  C  *  T  S  Q  E  F  S  C  I  Q  L  *  T  W  F  *  R  L  C  S  Q  V  D  *  E  T  G  F  *  N  I  * :   N  A  W  C  G  I  C  I  S  K  Y  *  E  K  P  A  Y  N  S  F  M  G  F  Y  G  A  Q  *  R  *  N  N  G  N  P  R  F  F  H  Q  E  P  S  *  C  N  H  W  F  H  *  Y  R :   N  L  A  *  V  S  K  F  *  G  H  P  H  A  S  S  A  C  W  M  E  R  T  M  P  I  R  G  S  I  Q  C  L  N  M  Q  Q  :  E  N  N  W  G  K  I  L  Y  E  W  L  C  S  *  R  R  *  K  D  H  V  Q  V  C  Q  G  Q  F  W  S  W  K  S  Y  S  F  N  C  C  W  A  L  C  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="114103" stop="114186"/>
                    <exon start="114277" stop="114374"/>
                    <exon start="114471" stop="114568"/>
                    <exon start="114660" stop="114818"/>
                    <exon start="115376" stop="115487"/>
                    <exon start="115573" stop="115708"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>687</number_coding_nucleotides>
                  <number_encoded_amino_acids>229</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EMGVSKKTLFLLFVSVFLGEISLCSSTKLYVVYMGSKDSDEHQDEILRQNHQMLTDIHGGNVEQAKSSHVYSYRHGFKGFAAKLTEKQASEISKMPGVVSVFPNTKRNLHTTHSWDFMGLSEDETMEIPGFSTKNQVNVIIGFIDTGIWPESPSFRDTHMPPVPAGWKGQCQSGEAFNASICNRKIIGARYYMSGYAAEEDEKIMFKSARDSSGHGSHTASTAAGRYVA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="115374" e_stop="115487"/>
            <exon e_start="115573" e_stop="116095"/>
            <exon e_start="116176" e_stop="116282"/>
            <exon e_start="116365" e_stop="116810"/>
            <exon e_start="117059" e_stop="117245"/>
            <exon e_start="117455" e_stop="118283"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.986" e_score="0.991"/>
          <exon-intron don_prob="0.904" acc_prob="0.766" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.953" e_score="1.000"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="115374" e_stop="115487" e_length="114"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.986">
            <gDNA_intron_boundary i_start="115488" i_stop="115572" i_length="85"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="115573" e_stop="116095" e_length="523"/>
          </exon>
          <intron i_serial="2" don_prob="0.904" acc_prob="0.766">
            <gDNA_intron_boundary i_start="116096" i_stop="116175" i_length="80"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="116176" e_stop="116282" e_length="107"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.000">
            <gDNA_intron_boundary i_start="116283" i_stop="116364" i_length="82"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="116365" e_stop="116810" e_length="446"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.990">
            <gDNA_intron_boundary i_start="116811" i_stop="117058" i_length="248"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="117059" e_stop="117245" e_length="187"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.953">
            <gDNA_intron_boundary i_start="117246" i_stop="117454" i_length="209"/>
          </intron>
          <exon e_serial="6" e_score="0.990">
            <gDNA_exon_boundary e_start="117455" e_stop="118283" e_length="829"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115374" stop="115487"/>
              <exon start="115573" stop="116095"/>
              <exon start="116176" stop="116282"/>
              <exon start="116365" stop="116810"/>
              <exon start="117059" stop="117245"/>
              <exon start="117455" stop="118283"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566126" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGAATTTGGCCTGAGTCTCCAAGTTTTAGGGACACCCACATGCCTCCAGTGCCTGCTGGATGGAAAGGACAATGCCAATCAGGGGAAGCATTCAATGCCTCAATATGCAACAG : GAAAATAATTGGGGCAAGATATTATATGAGTGGCTATGCAGCTGAAGAAGATGAAAAGATCATGTTCAAGTCTGCCAGGGACAGTTCTGGTCATGGAAGTCATACAGCTTCAACTGCTGCTGGGCGTTATGTAGCTGATATGAATTACAAAGGTTTGGCATCTGGAGGAGCCAGAGGTGGTGCCCCAATGGCCAGGATAGCAGTGTACAAAACCTGCTGGAGTTCTGGTTGCTATGATGTTGATTTGTTGGCTGCATTTGATGATGCAATTAGAGATGGGGTTCATGTCATTTCTATATCTTTGGGCCCAGATGCTCCCCAAGGAGATTATTTTAGTGATGCAATTTCTGTGGGGTCATTTCATGCTGTTAGCCGTGGGATACTTGTAGTGGCCTCCGTTGGAAATGAAGGAACCTCTGGTTCAGCCACAAATTTAGCTCCTTGGATGATCACAGTTGCAGCCAGTTCAACCGATAGAGATTTTACATCTGATGTTTTACTAGGAAATAGAGTTCAACTCACG : GGTGAAAGTCTTAGCTTATCTCAAATGCATACATCTGCAAAAATCATACCTGCTTCTGAAGCTTATGCTGGATACTTCACTCCTTATCAATCCAGGTGAAGCAGAAG : TTATTGCTTAGATAGTTCTTTGAATAGAACTAAGGCCAAAGGGAAGGTTCTTGTGTGTCGACATGCTGGAAGCTCAAGTGAGTCAAAGCTGGAGAAAAGCAATATAGTTAAACAAGCTGGTGGAGTTGGGATGATCCTTATTGATGAAGCAGACAAGGGTGTGGCTATTCCCTTCTCCATTCCAGCAGCAACTGTTGGGCAAAAGATTGGAAAAAAGATCCTAGCTTACATTAATAATACACGGTTCACTTCTTTGTTAGTGGCTGTTGATATTTGTTTTTATTGTTCTTTGATGTTGTTAGCAATCATCTCATCTCTTTTATATTTACAGCCTCCCTACTGCAAGAATTCTCTCTGCTAAAACTGTTTTGGGAGCTCAACCTGCTCCTCGAGTAACAGCATTTTCTTCAAGAGGTCCTAATTCTCTAACACCAGAAATTTTGAAG : CCTGATATTACTGCTCCCGGTTTAAATATCCTGGCAGCATGGTCCCCAGCAATGTCTAGGTTGAAGTTCAACATACTCTCTGGAACCTCCATGGCTTGCCCTCACATATCAGGAGTTGTTGCCTTGTTAAAAGCCGTGCATCCATCATGGTCTCCCTCTGCAATCAAATCAGCCATCATGACAACAG : CCAAACTATCAGATATGCATCACAAACCCATAATAGTAGATCCTGAAGGGAAGAAGGCTAATCCATTTGATTTTGGTTCTGGATTTGTTAACCCCACGAAAGTCCTCAATCCTGGTCTGATATATGATGCACAACCAGAAGATTACAGAGCATTTCTTTGTTCAATTGGTTATGACGAGAAATCTCTGCATCTAATTACAAGGGACAACAGAACGTGTGATCAAACCTTTGCATCGCCAAATGAACTAAATTATCCCTCCATCACAGTACCAAACCTCAGAAACAATTACTCAGTATCTCGAACTGTCACAAATGTGGGAAAGTCAAGGAGTACTTACAAGGCAGTTATATTTGCACCAAAGGGTATCAATGTTACTGTGGTGCCGCGAAGATTAGCCTTCACTAGATATTACCAGAAGATGAATTTCACAGTGACTTTCAAAGTGGCTGCACCTACACAGGGATATGTCTTTGGGTCCTTGTCATGGAGGAACAAAAGAACATGGGTAACATCTCCACTTGTTGTCAGAGTGGCACATTCCAATATGGGTACTGTGGTATAGTTCAGCTGCAGTGCTATTTATTTGTGTTATATAAGGTAAGTAACAAGATATTGCAACCAGTAGCTGCTGAAAATGGTTGCATGAAGAAGCCAACACAAAATTCTTAGAAGAATACATGTAATTAGTAGCAGAATACAAATAATTAGTAATTCTTTATTCTATTTGTCCTTTAGTTTTGAGTTTTGGTTCTTGCTACCTAGTCAGGTTTTACTAATAGGGATACTGCAAATTCTTTTACTTGTCTAGTAATTGCATTATGTATTGGC</gDNA_template>
            <first_frame> R  N  L  A  *  V  S  K  F  *  G  H  P  H  A  S  S  A  C  W  M  E  R  T  M  P  I  R  G  S  I  Q  C  L  N  M  Q  Q  :  E  N  N  W  G  K  I  L  Y  E  W  L  C  S  *  R  R  *  K  D  H  V  Q  V  C  Q  G  Q  F  W  S  W  K  S  Y  S  F  N  C  C  W  A  L  C  S  *  Y  E  L  Q  R  F  G  I  W  R  S  Q  R  W  C  P  N  G  Q  D  S  S  V  Q  N  L  L  E  F  W  L  L  *  C  *  F  V  G  C  I  *  *  C  N  *  R  W  G  S  C  H  F  Y  I  F  G  P  R  C  S  P  R  R  L  F  *  *  C  N  F  C  G  V  I  S  C  C  *  P  W  D  T  C  S  G  L  R  W  K  *  R  N  L  W  F  S  H  K  F  S  S  L  D  D  H  S  C  S  Q  F  N  R  *  R  F  Y  I  *  C  F  T  R  K  *  S  S  T  H   : G  *  K  S  *  L  I  S  N  A  Y  I  C  K  N  H  T  C  F  *  S  L  C  W  I  L  H  S  L  S  I  Q  V  K  Q  K  :  L  L  L  R  *  F  F  E  *  N  *  G  Q  R  E  G  S  C  V  S  T  C  W  K  L  K  *  V  K  A  G  E  K  Q  Y  S  *  T  S  W  W  S  W  D  D  P  Y  *  *  S  R  Q  G  C  G  Y  S  L  L  H  S  S  S  N  C  W  A  K  D  W  K  K  D  P  S  L  H  *  *  Y  T  V  H  F  F  V  S  G  C  *  Y  L  F  L  L  F  F  D  V  V  S  N  H  L  I  S  F  I  F  T  A  S  L  L  Q  E  F  S  L  L  K  L  F  W  E  L  N  L  L  L  E  *  Q  H  F  L  Q  E  V  L  I  L  *  H  Q  K  F  *  S :   L  I  L  L  L  P  V  *  I  S  W  Q  H  G  P  Q  Q  C  L  G  *  S  S  T  Y  S  L  E  P  P  W  L  A  L  T  Y  Q  E  L  L  P  C  *  K  P  C  I  H  H  G  L  P  L  Q  S  N  Q  P  S  *  Q  Q  :  P  N  Y  Q  I  C  I  T  N  P  *  *  *  I  L  K  G  R  R  L  I  H  L  I  L  V  L  D  L  L  T  P  R  K  S  S  I  L  V  *  Y  M  M  H  N  Q  K  I  T  E  H  F  F  V  Q  L  V  M  T  R  N  L  C  I  *  L  Q  G  T  T  E  R  V  I  K  P  L  H  R  Q  M  N  *  I  I  P  P  S  Q  Y  Q  T  S  E  T  I  T  Q  Y  L  E  L  S  Q  M  W  E  S  Q  G  V  L  T  R  Q  L  Y  L  H  Q  R  V  S  M  L  L  W  C  R  E  D  *  P  S  L  D  I  T  R  R  *  I  S  Q  *  L  S  K  W  L  H  L  H  R  D  M  S  L  G  P  C  H  G  G  T  K  E  H  G  *  H  L  H  L  L  S  E  W  H  I  P  I  W  V  L  W  Y  S  S  A  A  V  L  F  I  C  V  I  *  G  K  *  Q  D  I  A  T  S  S  C  *  K  W  L  H  E  E  A  N  T  K  F  L  E  E  Y  M  *  L  V  A  E  Y  K  *  L  V  I  L  Y  S  I  C  P  L  V  L  S  F  G  S  C  Y  L  V  R  F  Y  *  *  G  Y  C  K  F  F  Y  L  S  S  N  C  I  M  Y  W  </first_frame>
            <second_frame>  G  I  W  P  E  S  P  S  F  R  D  T  H  M  P  P  V  P  A  G  W  K  G  Q  C  Q  S  G  E  A  F  N  A  S  I  C  N  R :   K  I  I  G  A  R  Y  Y  M  S  G  Y  A  A  E  E  D  E  K  I  M  F  K  S  A  R  D  S  S  G  H  G  S  H  T  A  S  T  A  A  G  R  Y  V  A  D  M  N  Y  K  G  L  A  S  G  G  A  R  G  G  A  P  M  A  R  I  A  V  Y  K  T  C  W  S  S  G  C  Y  D  V  D  L  L  A  A  F  D  D  A  I  R  D  G  V  H  V  I  S  I  S  L  G  P  D  A  P  Q  G  D  Y  F  S  D  A  I  S  V  G  S  F  H  A  V  S  R  G  I  L  V  V  A  S  V  G  N  E  G  T  S  G  S  A  T  N  L  A  P  W  M  I  T  V  A  A  S  S  T  D  R  D  F  T  S  D  V  L  L  G  N  R  V  Q  L  T  :  G  E  S  L  S  L  S  Q  M  H  T  S  A  K  I  I  P  A  S  E  A  Y  A  G  Y  F  T  P  Y  Q  S  R  *  S  R  S :   Y  C  L  D  S  S  L  N  R  T  K  A  K  G  K  V  L  V  C  R  H  A  G  S  S  S  E  S  K  L  E  K  S  N  I  V  K  Q  A  G  G  V  G  M  I  L  I  D  E  A  D  K  G  V  A  I  P  F  S  I  P  A  A  T  V  G  Q  K  I  G  K  K  I  L  A  Y  I  N  N  T  R  F  T  S  L  L  V  A  V  D  I  C  F  Y  C  S  L  M  L  L  A  I  I  S  S  L  L  Y  L  Q  P  P  Y  C  K  N  S  L  C  *  N  C  F  G  S  S  T  C  S  S  S  N  S  I  F  F  K  R  S  *  F  S  N  T  R  N  F  E   : A  *  Y  Y  C  S  R  F  K  Y  P  G  S  M  V  P  S  N  V  *  V  E  V  Q  H  T  L  W  N  L  H  G  L  P  S  H  I  R  S  C  C  L  V  K  S  R  A  S  I  M  V  S  L  C  N  Q  I  S  H  H  D  N  S :   Q  T  I  R  Y  A  S  Q  T  H  N  S  R  S  *  R  E  E  G  *  S  I  *  F  W  F  W  I  C  *  P  H  E  S  P  Q  S  W  S  D  I  *  C  T  T  R  R  L  Q  S  I  S  L  F  N  W  L  *  R  E  I  S  A  S  N  Y  K  G  Q  Q  N  V  *  S  N  L  C  I  A  K  *  T  K  L  S  L  H  H  S  T  K  P  Q  K  Q  L  L  S  I  S  N  C  H  K  C  G  K  V  K  E  Y  L  Q  G  S  Y  I  C  T  K  G  Y  Q  C  Y  C  G  A  A  K  I  S  L  H  *  I  L  P  E  D  E  F  H  S  D  F  Q  S  G  C  T  Y  T  G  I  C  L  W  V  L  V  M  E  E  Q  K  N  M  G  N  I  S  T  C  C  Q  S  G  T  F  Q  Y  G  Y  C  G  I  V  Q  L  Q  C  Y  L  F  V  L  Y  K  V  S  N  K  I  L  Q  P  V  A  A  E  N  G  C  M  K  K  P  T  Q  N  S  *  K  N  T  C  N  *  *  Q  N  T  N  N  *  *  F  F  I  L  F  V  L  *  F  *  V  L  V  L  A  T  *  S  G  F  T  N  R  D  T  A  N  S  F  T  C  L  V  I  A  L  C  I  G </second_frame>
            <third_frame>   E  F  G  L  S  L  Q  V  L  G  T  P  T  C  L  Q  C  L  L  D  G  K  D  N  A  N  Q  G  K  H  S  M  P  Q  Y  A  T   : G  K  *  L  G  Q  D  I  I  *  V  A  M  Q  L  K  K  M  K  R  S  C  S  S  L  P  G  T  V  L  V  M  E  V  I  Q  L  Q  L  L  L  G  V  M  *  L  I  *  I  T  K  V  W  H  L  E  E  P  E  V  V  P  Q  W  P  G  *  Q  C  T  K  P  A  G  V  L  V  A  M  M  L  I  C  W  L  H  L  M  M  Q  L  E  M  G  F  M  S  F  L  Y  L  W  A  Q  M  L  P  K  E  I  I  L  V  M  Q  F  L  W  G  H  F  M  L  L  A  V  G  Y  L  *  W  P  P  L  E  M  K  E  P  L  V  Q  P  Q  I  *  L  L  G  *  S  Q  L  Q  P  V  Q  P  I  E  I  L  H  L  M  F  Y  *  E  I  E  F  N  S  R :   V  K  V  L  A  Y  L  K  C  I  H  L  Q  K  S  Y  L  L  L  K  L  M  L  D  T  S  L  L  I  N  P  G  E  A  E   : V  I  A  *  I  V  L  *  I  E  L  R  P  K  G  R  F  L  C  V  D  M  L  E  A  Q  V  S  Q  S  W  R  K  A  I  *  L  N  K  L  V  E  L  G  *  S  L  L  M  K  Q  T  R  V  W  L  F  P  S  P  F  Q  Q  Q  L  L  G  K  R  L  E  K  R  S  *  L  T  L  I  I  H  G  S  L  L  C  *  W  L  L  I  F  V  F  I  V  L  *  C  C  *  Q  S  S  H  L  F  Y  I  Y  S  L  P  T  A  R  I  L  S  A  K  T  V  L  G  A  Q  P  A  P  R  V  T  A  F  S  S  R  G  P  N  S  L  T  P  E  I  L  K  :  P  D  I  T  A  P  G  L  N  I  L  A  A  W  S  P  A  M  S  R  L  K  F  N  I  L  S  G  T  S  M  A  C  P  H  I  S  G  V  V  A  L  L  K  A  V  H  P  S  W  S  P  S  A  I  K  S  A  I  M  T  T   : A  K  L  S  D  M  H  H  K  P  I  I  V  D  P  E  G  K  K  A  N  P  F  D  F  G  S  G  F  V  N  P  T  K  V  L  N  P  G  L  I  Y  D  A  Q  P  E  D  Y  R  A  F  L  C  S  I  G  Y  D  E  K  S  L  H  L  I  T  R  D  N  R  T  C  D  Q  T  F  A  S  P  N  E  L  N  Y  P  S  I  T  V  P  N  L  R  N  N  Y  S  V  S  R  T  V  T  N  V  G  K  S  R  S  T  Y  K  A  V  I  F  A  P  K  G  I  N  V  T  V  V  P  R  R  L  A  F  T  R  Y  Y  Q  K  M  N  F  T  V  T  F  K  V  A  A  P  T  Q  G  Y  V  F  G  S  L  S  W  R  N  K  R  T  W  V  T  S  P  L  V  V  R  V  A  H  S  N  M  G  T  V  V  *  F  S  C  S  A  I  Y  L  C  Y  I  R  *  V  T  R  Y  C  N  Q  *  L  L  K  M  V  A  *  R  S  Q  H  K  I  L  R  R  I  H  V  I  S  S  R  I  Q  I  I  S  N  S  L  F  Y  L  S  F  S  F  E  F  W  F  L  L  P  S  Q  V  L  L  I  G  I  L  Q  I  L  L  L  V  *  *  L  H  Y  V  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="18" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="116667" stop="116810"/>
                    <exon start="117059" stop="117245"/>
                    <exon start="117455" stop="118017"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>891</number_coding_nucleotides>
                  <number_encoded_amino_acids>297</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QSSHLFYIYSLPTARILSAKTVLGAQPAPRVTAFSSRGPNSLTPEILKPDITAPGLNILAAWSPAMSRLKFNILSGTSMACPHISGVVALLKAVHPSWSPSAIKSAIMTTAKLSDMHHKPIIVDPEGKKANPFDFGSGFVNPTKVLNPGLIYDAQPEDYRAFLCSIGYDEKSLHLITRDNRTCDQTFASPNELNYPSITVPNLRNNYSVSRTVTNVGKSRSTYKAVIFAPKGINVTVVPRRLAFTRYYQKMNFTVTFKVAAPTQGYVFGSLSWRNKRTWVTSPLVVRVAHSNMGTVV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0146O12.1" strand="+"/>
                <serials PGL_serial="18" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="115375" stop="115487"/>
                    <exon start="115573" stop="116095"/>
                    <exon start="116176" stop="116274"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>732</number_coding_nucleotides>
                  <number_encoded_amino_acids>244</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GIWPESPSFRDTHMPPVPAGWKGQCQSGEAFNASICNRKIIGARYYMSGYAAEEDEKIMFKSARDSSGHGSHTASTAAGRYVADMNYKGLASGGARGGAPMARIAVYKTCWSSGCYDVDLLAAFDDAIRDGVHVISISLGPDAPQGDYFSDAISVGSFHAVSRGILVVASVGNEGTSGSATNLAPWMITVAASSTDRDFTSDVLLGNRVQLTGESLSLSQMHTSAKIIPASEAYAGYFTPYQSR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 47 chains have been computed
$ 
$ memory statistics:
$ 49640 bytes spliced alignments in total
$ 23 spliced alignments have been stored
$ 2158 bytes was the average size of a spliced alignment
$ 27440 bytes predicted gene locations in total
$ 18 predicted gene locations have been stored
$ 1524 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 50 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-28 09:19:09
-->
