<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 09:43:49"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E543195" ref_strand="+" ref_description="SGN-E543195 [TUS-64-O5]">
      <seq>catagtttttgagatcgtccatggcagaagtgatcctccatgtttacgacttaaccaaaagtgacgggcaagacgcagtaaatttcggcgtagtccaaatgaacaggctactgaaagacaccatctctttcggcggcatgttccacactgccgtccaagtttacgacaacgttgaatgggcttacgggtcctgtgtgataggcagcggggttttcagttgccctgctactaaaaaccccaattacacgtatcgcgaaaagattgtattgggcagaacagagtgctctgcccacaaagtcaatcagatcttaaaagatcttcgcgacgcatggcctggtagcaaatacaatatggtgtcaaggaactcaaagcatttctgcgatgagttccttgagaaattaggggtcccaaaactaccgaattgggcaaacagatttgctaacattggggatttagcaaaggacgcagcagggatagcagttcaagctaaagagaaagcgtctaaacttgtgtttcatccggttgattttgctctcaacatgaccactactagtaaaaactctaaagcaatatataaccctagtcacgagtttaggttccgcttcaattttgctgttaataattttaaggtcgctgcaccggttatccgctccgatcgatgaaaagccatgcctcaattcattaaaactaccata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="962" stop="1"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="662" g_stop="1" g_length="662"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="662" r_length="662" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E543195" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E543195" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="662" e_stop="1"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATAGTTTTTGAGATCGTCCATGGCAGAAGTGATCCTCCATGTTTACGACTTAACCAAAAGTGACGGGCAAGACGCAGTAAATTTCGGCGTAGTCCAAATGAACAGGCTACTGAAAGACACCATCTCTTTCGGCGGCATGTTCCACACTGCCGTCCAAGTTTACGACAACGTTGAATGGGCTTACGGGTCCTGTGTGATAGGCAGCGGGGTTTTCAGTTGCCCTGCTACTAAAAACCCCAATTACACGTATCGCGAAAAGATTGTATTGGGCAGAACAGAGTGCTCTGCCCACAAAGTCAATCAGATCTTAAAAGATCTTCGCGACGCATGGCCTGGTAGCAAATACAATATGGTGTCAAGGAACTCAAAGCATTTCTGCGATGAGTTCCTTGAGAAATTAGGGGTCCCAAAACTACCGAATTGGGCAAACAGATTTGCTAACATTGGGGATTTAGCAAAGGACGCAGCAGGGATAGCAGTTCAAGCTAAAGAGAAAGCGTCTAAACTTGTGTTTCATCCGGTTGATTTTGCTCTCAACATGACCACTACTAGTAAAAACTCTAAAGCAATATATAACCCTAGTCACGAGTTTAGGTTCCGCTTCAATTTTGCTGTTAATAATTTTAAGGTCGCTGCACCGGTTATCGACCTGCAGGCATGC</genome_strand>
        <mrna_strand>CATAGTTTTTGAGATCGTCCATGGCAGAAGTGATCCTCCATGTTTACGACTTAACCAAAAGTGACGGGCAAGACGCAGTAAATTTCGGCGTAGTCCAAATGAACAGGCTACTGAAAGACACCATCTCTTTCGGCGGCATGTTCCACACTGCCGTCCAAGTTTACGACAACGTTGAATGGGCTTACGGGTCCTGTGTGATAGGCAGCGGGGTTTTCAGTTGCCCTGCTACTAAAAACCCCAATTACACGTATCGCGAAAAGATTGTATTGGGCAGAACAGAGTGCTCTGCCCACAAAGTCAATCAGATCTTAAAAGATCTTCGCGACGCATGGCCTGGTAGCAAATACAATATGGTGTCAAGGAACTCAAAGCATTTCTGCGATGAGTTCCTTGAGAAATTAGGGGTCCCAAAACTACCGAATTGGGCAAACAGATTTGCTAACATTGGGGATTTAGCAAAGGACGCAGCAGGGATAGCAGTTCAAGCTAAAGAGAAAGCGTCTAAACTTGTGTTTCATCCGGTTGATTTTGCTCTCAACATGACCACTACTAGTAAAAACTCTAAAGCAATATATAACCCTAGTCACGAGTTTAGGTTCCGCTTCAATTTTGCTGTTAATAATTTTAAGGTCGCTGCACCGGTTATCCGCTCCGATCGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E322166" ref_strand="+" ref_description="SGN-E322166 [cTOB-24-K8]">
      <seq>ttgtattgggcagaacagagtgctctgcccacaaagtcaatcagatcttaaaagatcttcgcgacgcatggcctggtagcaaatacaatatggtgtcaaggaactcaaagcatttctgcgatgagttccttgagaaattaggggtcccaaaactaccgaattgggcaaacagatttgctaacattggggatttagcaaaggacgcagcagggatagcagttcaagctaaagagaaagcgtctaaacttgtgtttcatccggttgattttgctctcaaatgaccactactagtaaaaactctaaagcaatatataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="701" stop="1"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="401" g_stop="86" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="315" r_length="315" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E322166" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>316</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E322166" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="401" e_stop="86"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTATTGGGCAGAACAGAGTGCTCTGCCCACAAAGTCAATCAGATCTTAAAAGATCTTCGCGACGCATGGCCTGGTAGCAAATACAATATGGTGTCAAGGAACTCAAAGCATTTCTGCGATGAGTTCCTTGAGAAATTAGGGGTCCCAAAACTACCGAATTGGGCAAACAGATTTGCTAACATTGGGGATTTAGCAAAGGACGCAGCAGGGATAGCAGTTCAAGCTAAAGAGAAAGCGTCTAAACTTGTGTTTCATCCGGTTGATTTTGCTCTCAACATGACCACTACTAGTAAAAACTCTAAAGCAATATATAA</genome_strand>
        <mrna_strand>TTGTATTGGGCAGAACAGAGTGCTCTGCCCACAAAGTCAATCAGATCTTAAAAGATCTTCGCGACGCATGGCCTGGTAGCAAATACAATATGGTGTCAAGGAACTCAAAGCATTTCTGCGATGAGTTCCTTGAGAAATTAGGGGTCCCAAAACTACCGAATTGGGCAAACAGATTTGCTAACATTGGGGATTTAGCAAAGGACGCAGCAGGGATAGCAGTTCAAGCTAAAGAGAAAGCGTCTAAACTTGTGTTTCATCCGGTTGATTTTGCTCTCAA-ATGACCACTACTAGTAAAAACTCTAAAGCAATATATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E303738" ref_strand="+" ref_description="SGN-E303738 [cLEX-4-G19]">
      <seq>atagtttttgagatcgtccatggcagaagtgatcctccatgtttacgacttaaccaaaagtgacgggcaagacgcagtaaatttcggcgtagtccaaatgaacaggctactgaaagacaccatctctttcggcggcatgttccacactgccgtccaagtttacgacaacgttgaatgggcttacgggtcctgtgtgataggcagcggggttttcagttgccctgctactaaaaaccccaattacacgtatcgcgaaaagattgtattgggcagaacagagtgctctgcccacaaagtcaatcagatcttaaaagatcttcgcgacgcatggcctggtagcaaatacaatatggtgtcaaggaactcaaagcatttctgcgatgagttccttgagaaattaggggtcccaaaactaccgaattgggcaaacagatttgctaacattggggatttagcaaaggacgcagcagggatagcagttcaagctaaagagaaagcgtctaaacttgtgtttcatccggttgattttgctctcaacatgaccactactagtaaaaactctaaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="961" stop="1"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="661" g_stop="95" g_length="567"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="567" r_length="567" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E303738" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E303738" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="661" e_stop="95"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAGTTTTTGAGATCGTCCATGGCAGAAGTGATCCTCCATGTTTACGACTTAACCAAAAGTGACGGGCAAGACGCAGTAAATTTCGGCGTAGTCCAAATGAACAGGCTACTGAAAGACACCATCTCTTTCGGCGGCATGTTCCACACTGCCGTCCAAGTTTACGACAACGTTGAATGGGCTTACGGGTCCTGTGTGATAGGCAGCGGGGTTTTCAGTTGCCCTGCTACTAAAAACCCCAATTACACGTATCGCGAAAAGATTGTATTGGGCAGAACAGAGTGCTCTGCCCACAAAGTCAATCAGATCTTAAAAGATCTTCGCGACGCATGGCCTGGTAGCAAATACAATATGGTGTCAAGGAACTCAAAGCATTTCTGCGATGAGTTCCTTGAGAAATTAGGGGTCCCAAAACTACCGAATTGGGCAAACAGATTTGCTAACATTGGGGATTTAGCAAAGGACGCAGCAGGGATAGCAGTTCAAGCTAAAGAGAAAGCGTCTAAACTTGTGTTTCATCCGGTTGATTTTGCTCTCAACATGACCACTACTAGTAAAAACTCTAAAGC</genome_strand>
        <mrna_strand>ATAGTTTTTGAGATCGTCCATGGCAGAAGTGATCCTCCATGTTTACGACTTAACCAAAAGTGACGGGCAAGACGCAGTAAATTTCGGCGTAGTCCAAATGAACAGGCTACTGAAAGACACCATCTCTTTCGGCGGCATGTTCCACACTGCCGTCCAAGTTTACGACAACGTTGAATGGGCTTACGGGTCCTGTGTGATAGGCAGCGGGGTTTTCAGTTGCCCTGCTACTAAAAACCCCAATTACACGTATCGCGAAAAGATTGTATTGGGCAGAACAGAGTGCTCTGCCCACAAAGTCAATCAGATCTTAAAAGATCTTCGCGACGCATGGCCTGGTAGCAAATACAATATGGTGTCAAGGAACTCAAAGCATTTCTGCGATGAGTTCCTTGAGAAATTAGGGGTCCCAAAACTACCGAATTGGGCAAACAGATTTGCTAACATTGGGGATTTAGCAAAGGACGCAGCAGGGATAGCAGTTCAAGCTAAAGAGAAAGCGTCTAAACTTGTGTTTCATCCGGTTGATTTTGCTCTCAACATGACCACTACTAGTAAAAACTCTAAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E337160" ref_strand="+" ref_description="SGN-E337160 [cTOE-7-P21]">
      <seq>aaaaatcaaaagaggattagcactgaatccattttctgattcaataatggagctacaactttttcttgccactttcttcagcatattgcttctcattttcacagtgaatttattgtccaagaaaagaaaatcaactctaaacttgcctccaggtccatggaaattgcctttcatcggaagcattcaccatttaattgctagccaattacctcaccatactcttagagacttggccaaaaaacatggccccttaatgcacttgcagctcggtgagatccctacgattgttatttcgagtcctcgtgtagcacaagaggtattaaaaactcacgatctcgcgttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="5168" stop="6111"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5468" g_stop="5811" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="344" r_length="344" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E337160" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>344</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E337160" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5468" e_stop="5811"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATCAAAAGAGGATTAGCACTGAATCCATTTTCTGATTCAATAATGGAGCTACAACTTTTTCTTGCCACTTTCTTCAGCATATTGCTTCTCATTTTCACAGTGAATTTATTGTCCAAGAAAAGAAAATCAACTCTAAACTTGCCTCCAGGTCCATGGAAATTGCCTTTCATCGGAAGCATTCACCATTTAATTGCTAGCCAATTACCTCACCATACTCTTAGAGACTTGGCCAAAAAACATGGCCCCTTAATGCACTTGCAGCTCGGTGAGATCCCTACGATTGTTATTTCGAGTCCTCGTGTAGCACAAGAGGTATTAAAAACTCACGATCTCGCGTTCA</genome_strand>
        <mrna_strand>AAAAATCAAAAGAGGATTAGCACTGAATCCATTTTCTGATTCAATAATGGAGCTACAACTTTTTCTTGCCACTTTCTTCAGCATATTGCTTCTCATTTTCACAGTGAATTTATTGTCCAAGAAAAGAAAATCAACTCTAAACTTGCCTCCAGGTCCATGGAAATTGCCTTTCATCGGAAGCATTCACCATTTAATTGCTAGCCAATTACCTCACCATACTCTTAGAGACTTGGCCAAAAAACATGGCCCCTTAATGCACTTGCAGCTCGGTGAGATCCCTACGATTGTTATTTCGAGTCCTCGTGTAGCACAAGAGGTATTAAAAACTCACGATCTCGCGTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E302239" ref_strand="+" ref_description="SGN-E302239 [cLEW-19-K20]">
      <seq>atccattttctgattcaataatggagctacaactttttcttgccacgttcttcagcatattgcttctcattttcacagtgaatttattgtccaagaaaagaaaatcaactctaaacttgcctccaggtccatggaaattgcctttcatcggaagcattcaccatttaattgctagccaattacctcaccatactcttagagacttggccaaaaaacatggccccttaatgcacttgcagctcggtgagatccctacgattgttatttcgagtcctcgtgtagcacaagaggtattaaaaactcacgatctcgcgttcacgaatcgtcctgggctgttaagtgtacagattttgacttacaactattcagacatcgcgtttgcaccttatggaaattactggagacaaatgcgaaaattatgcaccttggaactattgagtgcaaagaatgttgtatcatttgcctctattagagaggaagaagcattcgatctccttcaagacgttgaatcaaaatctggatcagttattaatcttacagaaaagatatacgctctcacaaatgcagtaatttgtagagcagcttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="5194" stop="6381"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5494" g_stop="6081" g_length="588"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="588" r_length="588" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E302239" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>588</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E302239" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5494" e_stop="6081"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCATTTTCTGATTCAATAATGGAGCTACAACTTTTTCTTGCCACTTTCTTCAGCATATTGCTTCTCATTTTCACAGTGAATTTATTGTCCAAGAAAAGAAAATCAACTCTAAACTTGCCTCCAGGTCCATGGAAATTGCCTTTCATCGGAAGCATTCACCATTTAATTGCTAGCCAATTACCTCACCATACTCTTAGAGACTTGGCCAAAAAACATGGCCCCTTAATGCACTTGCAGCTCGGTGAGATCCCTACGATTGTTATTTCGAGTCCTCGTGTAGCACAAGAGGTATTAAAAACTCACGATCTCGCGTTCACGAATCGTCCTGGGCTGTTAAGTGTACAGATTTTGACTTACAACTATTCAGACATCGCGTTTGCACCTTATGGAAATTACTGGAGACAAATGCGAAAATTATGCACCTTGGAACTATTGAGTGCAAAGAATGTTGTATCATTTGCCTCTATTAGAGAGGAAGAAGCATTCGATCTCCTTCAAGACGTTGAATCAAAATCTGGATCAGTTATTAATCTTACAGAAAAGATATACGCTCTCACAAATGCAGTAATTTGTAGAGCAGCTTTTG</genome_strand>
        <mrna_strand>ATCCATTTTCTGATTCAATAATGGAGCTACAACTTTTTCTTGCCACGTTCTTCAGCATATTGCTTCTCATTTTCACAGTGAATTTATTGTCCAAGAAAAGAAAATCAACTCTAAACTTGCCTCCAGGTCCATGGAAATTGCCTTTCATCGGAAGCATTCACCATTTAATTGCTAGCCAATTACCTCACCATACTCTTAGAGACTTGGCCAAAAAACATGGCCCCTTAATGCACTTGCAGCTCGGTGAGATCCCTACGATTGTTATTTCGAGTCCTCGTGTAGCACAAGAGGTATTAAAAACTCACGATCTCGCGTTCACGAATCGTCCTGGGCTGTTAAGTGTACAGATTTTGACTTACAACTATTCAGACATCGCGTTTGCACCTTATGGAAATTACTGGAGACAAATGCGAAAATTATGCACCTTGGAACTATTGAGTGCAAAGAATGTTGTATCATTTGCCTCTATTAGAGAGGAAGAAGCATTCGATCTCCTTCAAGACGTTGAATCAAAATCTGGATCAGTTATTAATCTTACAGAAAAGATATACGCTCTCACAAATGCAGTAATTTGTAGAGCAGCTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E334841" ref_strand="+" ref_description="SGN-E334841 [cTOE-3-G12]">
      <seq>agcatattgcttctcattttcacagtgaatttattgtccaagaaaagaaaatcaactctaaacttgcctccaggtccatggaaattgcctttcatcggaagcattcaccatttaattgctagccaattacctcaccatactcttagagacttggccaaaaaacatggccccttaatgcacttgcagctcggtgagatccctacgattgttatttcgagtcctcgtgtagcacaagaggtattaaaaactcacgatctcgcgttcacgaatcgtcctgggctgttaagtgtacagattttgacttacaactattcagacatcgcgtttgcaccttatggaaattactggagacaaatgcgaaaattatgcaccttggaacttttgagtgcaaagaatgttgtatcatttgcctctattagagaggaagaagcattcgatctccttcaagacgttgaatcaaaatctggatcagttattaatcttacagaaaagatatacgctctcacaaatgcagtaatttgtagagcagcttttggtaagaggagaaaagaagaatcaacatatttcatgtctttgataaaggaattatcattaatgataacaggtttggaccataagtgaggtgtttccttcgctgaagtttctgcaagtcattactgggactaaagaaaaattattgaagcttcataaaaagtttgacaaggtgcttgacatgataatagaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="5247" stop="6697"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5547" g_stop="6150" g_length="604"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="604" r_length="604" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="6151" i_stop="6277" i_length="127">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.876" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6278" g_stop="6397" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="605" r_stop="725" r_length="121" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E334841" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>724</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E334841" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5547" e_stop="6150"/>
          <exon e_start="6278" e_stop="6397"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCATATTGCTTCTCATTTTCACAGTGAATTTATTGTCCAAGAAAAGAAAATCAACTCTAAACTTGCCTCCAGGTCCATGGAAATTGCCTTTCATCGGAAGCATTCACCATTTAATTGCTAGCCAATTACCTCACCATACTCTTAGAGACTTGGCCAAAAAACATGGCCCCTTAATGCACTTGCAGCTCGGTGAGATCCCTACGATTGTTATTTCGAGTCCTCGTGTAGCACAAGAGGTATTAAAAACTCACGATCTCGCGTTCACGAATCGTCCTGGGCTGTTAAGTGTACAGATTTTGACTTACAACTATTCAGACATCGCGTTTGCACCTTATGGAAATTACTGGAGACAAATGCGAAAATTATGCACCTTGGAACTATTGAGTGCAAAGAATGTTGTATCATTTGCCTCTATTAGAGAGGAAGAAGCATTCGATCTCCTTCAAGACGTTGAATCAAAATCTGGATCAGTTATTAATCTTACAGAAAAGATATACGCTCTCACAAATGCAGTAATTTGTAGAGCAGCTTTTGGTAAGAGGAGAAAAGAAGAATCAACATATTTCATGTCTTTGATAAAGGAATTATCATTAATGATAACAGGTTTAGACCTTTTCTTTCTCTTTTTTTTTTTTTTCAAAAAAACAAGTCTCTGCCCATTAACGAGCCTGCCTTCTGTACGGTGTTTTTTAGTAGTGATTGCATTTTCCCCTCAATTATTTACTAATAGGTTTGGA-CATAAGTGAGGTGTTTCCTTCGCTGAAGTTTCTGCAAGTCATTACTGGGACTAAAGAAAAATTATTGAAGCTTCATAAAAAGTTTGACAAGGTGCTTGACATGATAATAGAAG</genome_strand>
        <mrna_strand>AGCATATTGCTTCTCATTTTCACAGTGAATTTATTGTCCAAGAAAAGAAAATCAACTCTAAACTTGCCTCCAGGTCCATGGAAATTGCCTTTCATCGGAAGCATTCACCATTTAATTGCTAGCCAATTACCTCACCATACTCTTAGAGACTTGGCCAAAAAACATGGCCCCTTAATGCACTTGCAGCTCGGTGAGATCCCTACGATTGTTATTTCGAGTCCTCGTGTAGCACAAGAGGTATTAAAAACTCACGATCTCGCGTTCACGAATCGTCCTGGGCTGTTAAGTGTACAGATTTTGACTTACAACTATTCAGACATCGCGTTTGCACCTTATGGAAATTACTGGAGACAAATGCGAAAATTATGCACCTTGGAACTTTTGAGTGCAAAGAATGTTGTATCATTTGCCTCTATTAGAGAGGAAGAAGCATTCGATCTCCTTCAAGACGTTGAATCAAAATCTGGATCAGTTATTAATCTTACAGAAAAGATATACGCTCTCACAAATGCAGTAATTTGTAGAGCAGCTTTTGGTAAGAGGAGAAAAGAAGAATCAACATATTTCATGTCTTTGATAAAGGAATTATCATTAATGATAACAG...............................................................................................................................GTTTGGACCATAAGTGAGGTGTTTCCTTCGCTGAAGTTTCTGCAAGTCATTACTGGGACTAAAGAAAAATTATTGAAGCTTCATAAAAAGTTTGACAAGGTGCTTGACATGATAATAGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E355278" ref_strand="-" ref_description="SGN-E355278 [cTOS-18-H12]">
      <seq>gaatttcatttggtttatcaaatgttgagcttccattagctcaacttttttaccatttcaattggaagctgcctaacgggatgaagcctgaagatgttgatgttactgaaactcctggttctagttgtagtagaaaatataatttgtgtgttattgctacctctaatgatcacgggatttgataattacaagtgtaattgtggttgtttttcttttgttgagaataatgtatattcagtatatcttttttatgatggaagagtgtttgtttttttaactgtgaaaaaaaaaaaaaaaaaaaaactcaagctagttctctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="6756" stop="46767"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7056" g_stop="7358" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="303" r_length="303" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7359" i_stop="7569" i_length="211">
            <donor d_prob="0.000" d_score="0.76"/>
            <acceptor a_prob="0.445" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7570" g_stop="7587" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="321" r_length="18" r_score="0.611"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E355278" ref_strand="-">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>321</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355278" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="7056" e_stop="7358"/>
          <exon e_start="7570" e_stop="7587"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATTTCATTTGGTTTATCAAATGTTGAGCTTCCATTAGCTCAACTTATCTACCATTTCAATTGGAAGCTGCCTAACGGGATGAAGCCTGAAGATGTTGATGTTACTGAAACTCCTGGTTCTAGTTGTAGTAGAAAATATAATTTGTGTGTTATTGCTACCTCTAATGATCACGGGATTTGATAATTACAAGTGTAATTGTGGTTGTTTTTCTTTTGTTGAGAATAATGTATATTCAGTATATCTTTTTTATGATGGAAGAGTGTTTGTTTTTTTAACTGTGAACTATACTTTTATTTAGAAAACTGCGTTATGTTAGAGAGACTATGTACATAATCGGAGTTCCCATTCGATTCACATGTGAAATCGGAGCGGCTGAGTTTTTTGCAATTAAAATTATTGATCAACTTTCATTGTTTGGCTGATGAAAAATAAATAATTAGTAGCAATAACTTTTTTGTAGCTGTAGTAGGACATTTAGTTTATGTCTACTTGCTACATGTAATAACGAATAGCTGAAGCCTGATGTTACT</genome_strand>
        <mrna_strand>GAATTTCATTTGGTTTATCAAATGTTGAGCTTCCATTAGCTCAACTTTTTTACCATTTCAATTGGAAGCTGCCTAACGGGATGAAGCCTGAAGATGTTGATGTTACTGAAACTCCTGGTTCTAGTTGTAGTAGAAAATATAATTTGTGTGTTATTGCTACCTCTAATGATCACGGGATTTGATAATTACAAGTGTAATTGTGGTTGTTTTTCTTTTGTTGAGAATAATGTATATTCAGTATATCTTTTTTATGATGGAAGAGTGTTTGTTTTTTTAACTGTGAAAAAAAAAAAAAAAAAAAAA...................................................................................................................................................................................................................CTCAAGCTAGTTCTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E376506" ref_strand="+" ref_description="SGN-E376506 [TUS-17-B17]">
      <seq>caaaaggcccatactttgcccaacgaatcaacaaaatacccattttctccgtaaacccatcttctccaagaacccaaatcggcaagaactcaaaatcggaaagcaaaaatgatgcacatgaccttttattggggtaaaaaagtaacccttttgttcgatttctggagaactgattcatgggctagctatgcaattactttacttgcttgttttatcttcgccctattttatcagtatatggaagatcgtcgtcaacgattcaggattatctctgccagtttcaggaggaattacccttcgccgcctagcgccgctgtgaatgctccccttctttacactttcccgaccgtcggcggtaagtggaactcggcgagattcgctacggcgatcgtttttgggatcaattcggcaattgggtatatgcttatgttggctgttatgtcattcaacggcggcgtttttgttgctattgttctgggtttggcgatcggatatttgctgttcaggatcggcgatgaggatgatgtcaccgttgataatccttgtgcctgtgcttgatagttaatgggtttgtttgttgtatactgattcaatgataatgaaatataatttccttttttatgtagcagtattggatctctgttgatctttcctatttcctttctgtttctgttgatttctttatctaaatataattttacaccttttctgctttaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="9109" stop="7796"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8809" g_stop="8095" g_length="715"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="715" r_length="715" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="716" polyA_stop="739"/>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E376506" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E376506" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8809" e_stop="8095"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAGGCCCATACTTTGCCCAACGAATCAACAAAATACCCATTTTCTCCGTAAACCCATCTTCTCCAAGAACCCAAATCGGCAAGAACTCAAAATCGGAAAGCAAAAATGATGCACATGACCTTTTATTGGGGTAAAAAAGTAACCCTTTTGTTCGATTTCTGGAGAACTGATTCATGGGCTAGCTATGCAATTACTTTACTTGCTTGTTTTATCTTCGCCCTATTTTATCAGTATATGGAAGATCGTCGTCAACGATTCAGGATTATCTCTGCCAGTTTCAGGAGGAATTACCCTTCGCCGCCTAGCGCCGCTGTGAATGCTCCCCTTCTTTACACTTTCCCGACCGTCGGCGGTAAGTGGAACTCGGCGAGATTCGCTACGGCGATCGTTTTTGGGATCAATTCGGCAATTGGGTATATGCTTATGTTGGCTGTTATGTCATTCAACGGCGGCGTTTTTGTTGCTATTGTTCTGGGTTTGGCGATCGGATATTTGCTGTTCAGGATCGGCGATGAGGATGATGTCACCGTTGATAATCCTTGTGCCTGTGCTTGATAGTTAATGGGTTTGTTTGTTGTATACTGATTCAATGATAATGAAATATAATTTCCTTTTTTATGTAGCAGTATTGGATCTCTGTTGATCTTTCCTATTTCCTTTCTG-TTCTGTTGTATTTCTTCATCTCAATATAATTTTACACCTTTTCTGCTTA</genome_strand>
        <mrna_strand>CAAAAGGCCCATACTTTGCCCAACGAATCAACAAAATACCCATTTTCTCCGTAAACCCATCTTCTCCAAGAACCCAAATCGGCAAGAACTCAAAATCGGAAAGCAAAAATGATGCACATGACCTTTTATTGGGGTAAAAAAGTAACCCTTTTGTTCGATTTCTGGAGAACTGATTCATGGGCTAGCTATGCAATTACTTTACTTGCTTGTTTTATCTTCGCCCTATTTTATCAGTATATGGAAGATCGTCGTCAACGATTCAGGATTATCTCTGCCAGTTTCAGGAGGAATTACCCTTCGCCGCCTAGCGCCGCTGTGAATGCTCCCCTTCTTTACACTTTCCCGACCGTCGGCGGTAAGTGGAACTCGGCGAGATTCGCTACGGCGATCGTTTTTGGGATCAATTCGGCAATTGGGTATATGCTTATGTTGGCTGTTATGTCATTCAACGGCGGCGTTTTTGTTGCTATTGTTCTGGGTTTGGCGATCGGATATTTGCTGTTCAGGATCGGCGATGAGGATGATGTCACCGTTGATAATCCTTGTGCCTGTGCTTGATAGTTAATGGGTTTGTTTGTTGTATACTGATTCAATGATAATGAAATATAATTTCCTTTTTTATGTAGCAGTATTGGATCTCTGTTGATCTTTCCTATTTCCTTTCTGTTTCTGTTG-ATTTCTTTATCTAAATATAATTTTACACCTTTTCTGCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E349787" ref_strand="+" ref_description="SGN-E349787 [cTOS-3-D4]">
      <seq>ttatcttcgccctattttatcagtatatggaagatcgtcgtcaacgattcaggattatctctgccagtttcaggaggaattacccttcgccgcctagcgccgctgtgaatgctccccttctttacactttcccgaccgtcggcggtaagtggaactcggcgagattcgctacggcgatcgtttttgggatcaattcggcaattgggtatatgcttatgttggctgttatgtcattcaacggcggcgtttttgttgctattgttctgggtttggcgatcggatatttgctgttcaggatcggcgatgaagatgatgtcaccgttgataatccttgtgcctgtgcttgatagttaatgggtttggttggtgtatactgattccatgataatgaaatataatttccttttttatgtagcagtattggatctcctggtgatctttccctatttcctttctggtctggtggatttcttcatctcaatataattttacaccttttctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="8898" stop="7797"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8598" g_stop="8097" g_length="502"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="504" r_length="504" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E349787" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>502</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349787" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8598" e_stop="8097"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATCTTCGCCCTATTTTATCAGTATATGGAAGATCGTCGTCAACGATTCAGGATTATCTCTGCCAGTTTCAGGAGGAATTACCCTTCGCCGCCTAGCGCCGCTGTGAATGCTCCCCTTCTTTACACTTTCCCGACCGTCGGCGGTAAGTGGAACTCGGCGAGATTCGCTACGGCGATCGTTTTTGGGATCAATTCGGCAATTGGGTATATGCTTATGTTGGCTGTTATGTCATTCAACGGCGGCGTTTTTGTTGCTATTGTTCTGGGTTTGGCGATCGGATATTTGCTGTTCAGGATCGGCGATGAGGATGATGTCACCGTTGATAATCCTTGTGCCTGTGCTTGATAGTTAATGGGTTTGTTTGTTGTATACTGATTCAATGATAATGAAATATAATTTCCTTTTTTATGTAGCAGTATTGGATCT-CTGTTGATCTTT-CCTATTTCCTTTCTGTTCTGTTGTATTTCTTCATCTCAATATAATTTTACACCTTTTCTGCT</genome_strand>
        <mrna_strand>TTATCTTCGCCCTATTTTATCAGTATATGGAAGATCGTCGTCAACGATTCAGGATTATCTCTGCCAGTTTCAGGAGGAATTACCCTTCGCCGCCTAGCGCCGCTGTGAATGCTCCCCTTCTTTACACTTTCCCGACCGTCGGCGGTAAGTGGAACTCGGCGAGATTCGCTACGGCGATCGTTTTTGGGATCAATTCGGCAATTGGGTATATGCTTATGTTGGCTGTTATGTCATTCAACGGCGGCGTTTTTGTTGCTATTGTTCTGGGTTTGGCGATCGGATATTTGCTGTTCAGGATCGGCGATGAAGATGATGTCACCGTTGATAATCCTTGTGCCTGTGCTTGATAGTTAATGGGTTTGGTTGGTGTATACTGATTCCATGATAATGAAATATAATTTCCTTTTTTATGTAGCAGTATTGGATCTCCTGGTGATCTTTCCCTATTTCCTTTCTGGTCTGGTGGATTTCTTCATCTCAATATAATTTTACACCTTTTCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E718673" ref_strand="+" ref_description="SGN-E718673 [FC05BG02]">
      <seq>aggcccatactttgcccaacgaatcaacaaaatccccattttctccgtaaacccatcttctccaagaacccaaatcggcaagaactcaaaatcggaaagcaaaaatgatgcacatgaccttttattggggtaaaaaagtaacccttttgttcgatttctggagaactgattcatgggctagctatgcaattactttacttgcttgttttatcttcgccctattttatcagtatatggaagatcgtcgtcaacgattcaggattatctctgccagtttcaggaggaattacccttcgccgcctagcgccgctgtgaatgctccccttctttacactttcccgaccgtcggcggtaagtggaactcggcgagattcgctacggcgatcgtttttgggatcaattcggcaattgggtatatgcttatgttggctgttatgtcattcaacggcggcgtttttgttgctattgttctgggtttggcaatcggatatttgctgttcaggatcggcgatgaggatgatgtcaccgttgataatccttgtgcctgtgcttgatagttaatgggtttgtttgttgtatactgattcaatgataatgaaatataatttccttttttatgtagcagtattggatctctgttgatctttcctatttcctttctgttctgttgtatttcttcatctcaatataattttacaccttttctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="9105" stop="7798"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8805" g_stop="8098" g_length="708"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="708" r_length="708" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E718673" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>708</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E718673" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8805" e_stop="8098"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGCCCATACTTTGCCCAACGAATCAACAAAATACCCATTTTCTCCGTAAACCCATCTTCTCCAAGAACCCAAATCGGCAAGAACTCAAAATCGGAAAGCAAAAATGATGCACATGACCTTTTATTGGGGTAAAAAAGTAACCCTTTTGTTCGATTTCTGGAGAACTGATTCATGGGCTAGCTATGCAATTACTTTACTTGCTTGTTTTATCTTCGCCCTATTTTATCAGTATATGGAAGATCGTCGTCAACGATTCAGGATTATCTCTGCCAGTTTCAGGAGGAATTACCCTTCGCCGCCTAGCGCCGCTGTGAATGCTCCCCTTCTTTACACTTTCCCGACCGTCGGCGGTAAGTGGAACTCGGCGAGATTCGCTACGGCGATCGTTTTTGGGATCAATTCGGCAATTGGGTATATGCTTATGTTGGCTGTTATGTCATTCAACGGCGGCGTTTTTGTTGCTATTGTTCTGGGTTTGGCGATCGGATATTTGCTGTTCAGGATCGGCGATGAGGATGATGTCACCGTTGATAATCCTTGTGCCTGTGCTTGATAGTTAATGGGTTTGTTTGTTGTATACTGATTCAATGATAATGAAATATAATTTCCTTTTTTATGTAGCAGTATTGGATCTCTGTTGATCTTTCCTATTTCCTTTCTGTTCTGTTGTATTTCTTCATCTCAATATAATTTTACACCTTTTCTGC</genome_strand>
        <mrna_strand>AGGCCCATACTTTGCCCAACGAATCAACAAAATCCCCATTTTCTCCGTAAACCCATCTTCTCCAAGAACCCAAATCGGCAAGAACTCAAAATCGGAAAGCAAAAATGATGCACATGACCTTTTATTGGGGTAAAAAAGTAACCCTTTTGTTCGATTTCTGGAGAACTGATTCATGGGCTAGCTATGCAATTACTTTACTTGCTTGTTTTATCTTCGCCCTATTTTATCAGTATATGGAAGATCGTCGTCAACGATTCAGGATTATCTCTGCCAGTTTCAGGAGGAATTACCCTTCGCCGCCTAGCGCCGCTGTGAATGCTCCCCTTCTTTACACTTTCCCGACCGTCGGCGGTAAGTGGAACTCGGCGAGATTCGCTACGGCGATCGTTTTTGGGATCAATTCGGCAATTGGGTATATGCTTATGTTGGCTGTTATGTCATTCAACGGCGGCGTTTTTGTTGCTATTGTTCTGGGTTTGGCAATCGGATATTTGCTGTTCAGGATCGGCGATGAGGATGATGTCACCGTTGATAATCCTTGTGCCTGTGCTTGATAGTTAATGGGTTTGTTTGTTGTATACTGATTCAATGATAATGAAATATAATTTCCTTTTTTATGTAGCAGTATTGGATCTCTGTTGATCTTTCCTATTTCCTTTCTGTTCTGTTGTATTTCTTCATCTCAATATAATTTTACACCTTTTCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E354215" ref_strand="+" ref_description="SGN-E354215 [cTOS-16-C14]">
      <seq>ttatcttcgccctattttatcagtatatggaagatcgtcgtcaacgattcaggattatctctgccagtttcaggaggaattacccttcgccgcctagcgccgctgtgaatgctccccttctttacactttcccgaccgtcggcggtaagtggaactcggcgagattcgctacggcgatcgtttttgggatcaattcggcaattgggtatatgcttatgttggctgttatgtcattcaacggcggcgtttttgttgctattgttctgggtttggcgatcggatatttgctgttcaggatcggcgatgaggatgatgtcaccgttgataatccttgtgcctgtgcttgatagttaatgggtttgtttgttgtatactgattcaatgataatgaaatataatttccttttttatgtagcagtattggatctctgttgatctttcctatttcctttctgttctgttggatttcttcatctcatataattttacaccttttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="8898" stop="7800"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8598" g_stop="8100" g_length="499"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="498" r_length="498" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E354215" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>499</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E354215" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8598" e_stop="8100"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATCTTCGCCCTATTTTATCAGTATATGGAAGATCGTCGTCAACGATTCAGGATTATCTCTGCCAGTTTCAGGAGGAATTACCCTTCGCCGCCTAGCGCCGCTGTGAATGCTCCCCTTCTTTACACTTTCCCGACCGTCGGCGGTAAGTGGAACTCGGCGAGATTCGCTACGGCGATCGTTTTTGGGATCAATTCGGCAATTGGGTATATGCTTATGTTGGCTGTTATGTCATTCAACGGCGGCGTTTTTGTTGCTATTGTTCTGGGTTTGGCGATCGGATATTTGCTGTTCAGGATCGGCGATGAGGATGATGTCACCGTTGATAATCCTTGTGCCTGTGCTTGATAGTTAATGGGTTTGTTTGTTGTATACTGATTCAATGATAATGAAATATAATTTCCTTTTTTATGTAGCAGTATTGGATCTCTGTTGATCTTTCCTATTTCCTTTCTGTTCTGTTGTATTTCTTCATCTCAATATAATTTTACACCTTTTCT</genome_strand>
        <mrna_strand>TTATCTTCGCCCTATTTTATCAGTATATGGAAGATCGTCGTCAACGATTCAGGATTATCTCTGCCAGTTTCAGGAGGAATTACCCTTCGCCGCCTAGCGCCGCTGTGAATGCTCCCCTTCTTTACACTTTCCCGACCGTCGGCGGTAAGTGGAACTCGGCGAGATTCGCTACGGCGATCGTTTTTGGGATCAATTCGGCAATTGGGTATATGCTTATGTTGGCTGTTATGTCATTCAACGGCGGCGTTTTTGTTGCTATTGTTCTGGGTTTGGCGATCGGATATTTGCTGTTCAGGATCGGCGATGAGGATGATGTCACCGTTGATAATCCTTGTGCCTGTGCTTGATAGTTAATGGGTTTGTTTGTTGTATACTGATTCAATGATAATGAAATATAATTTCCTTTTTTATGTAGCAGTATTGGATCTCTGTTGATCTTTCCTATTTCCTTTCTGTTCTGTTGGATTTCTTCATCTC-ATATAATTTTACACCTTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E349898" ref_strand="+" ref_description="SGN-E349898 [cTOS-3-M5]">
      <seq>ttatcttcgccctattttatcagtatatggaagatcgtcgtcaacgattcaggattatctctgccagtttcaggaggaattacccttcgccgcctagcgccgctgtgaatgctccccttctttacactttcccgaccgtcggcggtaagtggaactcggcgagattcgctacggcgatcgtttttgggatcaattcggcaattgggtatatgcttatgttggctgttatgtcattcaacggcggcgtttttgttgctattgttctgggtttggcgatcggatatttgctgttcaggatcggcgatgaggatgatgtcaccgttgataatccttgtgcctgtgcttgatagttaatggggttggttgttgtatactgattcaatgataatgaaatatatttccttttttatgtagcagtattggatctctggtgatctttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="8898" stop="7857"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8598" g_stop="8157" g_length="442"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="441" r_length="441" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E349898" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>442</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349898" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8598" e_stop="8157"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATCTTCGCCCTATTTTATCAGTATATGGAAGATCGTCGTCAACGATTCAGGATTATCTCTGCCAGTTTCAGGAGGAATTACCCTTCGCCGCCTAGCGCCGCTGTGAATGCTCCCCTTCTTTACACTTTCCCGACCGTCGGCGGTAAGTGGAACTCGGCGAGATTCGCTACGGCGATCGTTTTTGGGATCAATTCGGCAATTGGGTATATGCTTATGTTGGCTGTTATGTCATTCAACGGCGGCGTTTTTGTTGCTATTGTTCTGGGTTTGGCGATCGGATATTTGCTGTTCAGGATCGGCGATGAGGATGATGTCACCGTTGATAATCCTTGTGCCTGTGCTTGATAGTTAATGGGTTTGTTTGTTGTATACTGATTCAATGATAATGAAATATAATTTCCTTTTTTATGTAGCAGTATTGGATCTCTGTTGATCTTTCC</genome_strand>
        <mrna_strand>TTATCTTCGCCCTATTTTATCAGTATATGGAAGATCGTCGTCAACGATTCAGGATTATCTCTGCCAGTTTCAGGAGGAATTACCCTTCGCCGCCTAGCGCCGCTGTGAATGCTCCCCTTCTTTACACTTTCCCGACCGTCGGCGGTAAGTGGAACTCGGCGAGATTCGCTACGGCGATCGTTTTTGGGATCAATTCGGCAATTGGGTATATGCTTATGTTGGCTGTTATGTCATTCAACGGCGGCGTTTTTGTTGCTATTGTTCTGGGTTTGGCGATCGGATATTTGCTGTTCAGGATCGGCGATGAGGATGATGTCACCGTTGATAATCCTTGTGCCTGTGCTTGATAGTTAATGGGGTTGGTTGTTGTATACTGATTCAATGATAATGAAATAT-ATTTCCTTTTTTATGTAGCAGTATTGGATCTCTGGTGATCTTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E212974" ref_strand="+" ref_description="SGN-E212974 [cLEC-72-M11]">
      <seq>tcgaatcgaacgaatcatatcaaaaggcccatactttgcccaacgaatcaacaaaatacccattttctccgtaaacccatcttctccaagaacccaaatcggcaagaactcaaaatcggaaagcaaaaatgatgcacatgaccttttattggggtaaaaaagtaacccttttgttcgatttctggagaactgattcatgggctagctatgcaattactttacttgcttgttttatcttcgccctattttatcagtatatggaagatcgtcgtcaacgattcaggattatctctgccagtttcaggaggaattacccttcgccgcctagcgccgctgtgaatgctccccttctttacactttcccgaccgtcggcggtaagtggaactcggcgagattcgctacggcgatcgtttttgggatcaattcggcaattgggtatatgcttatgttggctgttatgtcattcaacggcggcgtttttgttgctattgttctgggtttggcgatcggatatttgctgttcaggatcggcgatgaggatgatgtcaccgttgataatccttgtgcctgtgcttgatagttaatgggtttggttggtgtatactgattncatgataatggaatataatttccttttttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="9129" stop="7888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8829" g_stop="8188" g_length="642"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="642" r_length="642" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E212974" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>642</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E212974" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8829" e_stop="8188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAATCGAACGAATCATATCAAAAGGCCCATACTTTGCCCAACGAATCAACAAAATACCCATTTTCTCCGTAAACCCATCTTCTCCAAGAACCCAAATCGGCAAGAACTCAAAATCGGAAAGCAAAAATGATGCACATGACCTTTTATTGGGGTAAAAAAGTAACCCTTTTGTTCGATTTCTGGAGAACTGATTCATGGGCTAGCTATGCAATTACTTTACTTGCTTGTTTTATCTTCGCCCTATTTTATCAGTATATGGAAGATCGTCGTCAACGATTCAGGATTATCTCTGCCAGTTTCAGGAGGAATTACCCTTCGCCGCCTAGCGCCGCTGTGAATGCTCCCCTTCTTTACACTTTCCCGACCGTCGGCGGTAAGTGGAACTCGGCGAGATTCGCTACGGCGATCGTTTTTGGGATCAATTCGGCAATTGGGTATATGCTTATGTTGGCTGTTATGTCATTCAACGGCGGCGTTTTTGTTGCTATTGTTCTGGGTTTGGCGATCGGATATTTGCTGTTCAGGATCGGCGATGAGGATGATGTCACCGTTGATAATCCTTGTGCCTGTGCTTGATAGTTAATGGGTTTGTTTGTTGTATACTGATTCAATGATAATGAAATATAATTTCCTTTTTTAT</genome_strand>
        <mrna_strand>TCGAATCGAACGAATCATATCAAAAGGCCCATACTTTGCCCAACGAATCAACAAAATACCCATTTTCTCCGTAAACCCATCTTCTCCAAGAACCCAAATCGGCAAGAACTCAAAATCGGAAAGCAAAAATGATGCACATGACCTTTTATTGGGGTAAAAAAGTAACCCTTTTGTTCGATTTCTGGAGAACTGATTCATGGGCTAGCTATGCAATTACTTTACTTGCTTGTTTTATCTTCGCCCTATTTTATCAGTATATGGAAGATCGTCGTCAACGATTCAGGATTATCTCTGCCAGTTTCAGGAGGAATTACCCTTCGCCGCCTAGCGCCGCTGTGAATGCTCCCCTTCTTTACACTTTCCCGACCGTCGGCGGTAAGTGGAACTCGGCGAGATTCGCTACGGCGATCGTTTTTGGGATCAATTCGGCAATTGGGTATATGCTTATGTTGGCTGTTATGTCATTCAACGGCGGCGTTTTTGTTGCTATTGTTCTGGGTTTGGCGATCGGATATTTGCTGTTCAGGATCGGCGATGAGGATGATGTCACCGTTGATAATCCTTGTGCCTGTGCTTGATAGTTAATGGGTTTGGTTGGTGTATACTGATTNCATGATAATGGAATATAATTTCCTTTTTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E732794" ref_strand="+" ref_description="SGN-E732794 [LB03AF10]">
      <seq>cattacacaaactaaacccaattctcctcttctttcatcttatattctcatcattctgtcacaccttatcatcatcgaatcgaacgaatcatatcaaaaggcccatactttgcccaacgaatcaacaaaatacccattttctccgtaaacccatcttctccaagaacccaaatcggcaagaactcaaaatcggaaagcaaaaatgatgcacatgaccttttattggggtaaaaaagtaacccttttgttcgatttctggagaactgattcatgggctagctatgcaattactttacttgcttgttttatcttcgccctattttatcagtatatggaagatcgtcgtcaacgattcaggattatctctgccagtttcaggaggaattacccttcgccgcctagcgccgctgtgaatgctccccttctttacactttcccgaccgtcggcggtaagtggaactcggcgagattcgctacggcgatcgtttttgggatcaattcggcaattgggtatatgcttatgttggctgttatgtcattcaacggcggcgtttttgttgctattgttctgggtttggcgatcggatatttgctgttcaggatcggcgatgaggatgatgtcaccgttgataatccttgtgcctgtgcttgatagttaatgggtttgtttgttgtatactgattcaatgataatgaaatataatttccttttttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="9203" stop="7889"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8903" g_stop="8202" g_length="702"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="702" r_length="702" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="715" polyA_stop="725"/>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E732794" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>702</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E732794" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8903" e_stop="8202"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTACACAAACTAAACCCAATTCTCCTCTTCTTTCATCTTATATTCTCATCATTCTGTCACACCTTATCATCATCGAATCGAACGAATCATATCAAAAGGCCCATACTTTGCCCAACGAATCAACAAAATACCCATTTTCTCCGTAAACCCATCTTCTCCAAGAACCCAAATCGGCAAGAACTCAAAATCGGAAAGCAAAAATGATGCACATGACCTTTTATTGGGGTAAAAAAGTAACCCTTTTGTTCGATTTCTGGAGAACTGATTCATGGGCTAGCTATGCAATTACTTTACTTGCTTGTTTTATCTTCGCCCTATTTTATCAGTATATGGAAGATCGTCGTCAACGATTCAGGATTATCTCTGCCAGTTTCAGGAGGAATTACCCTTCGCCGCCTAGCGCCGCTGTGAATGCTCCCCTTCTTTACACTTTCCCGACCGTCGGCGGTAAGTGGAACTCGGCGAGATTCGCTACGGCGATCGTTTTTGGGATCAATTCGGCAATTGGGTATATGCTTATGTTGGCTGTTATGTCATTCAACGGCGGCGTTTTTGTTGCTATTGTTCTGGGTTTGGCGATCGGATATTTGCTGTTCAGGATCGGCGATGAGGATGATGTCACCGTTGATAATCCTTGTGCCTGTGCTTGATAGTTAATGGGTTTGTTTGTTGTATACTGATTCAATGATAATGAAATATA</genome_strand>
        <mrna_strand>CATTACACAAACTAAACCCAATTCTCCTCTTCTTTCATCTTATATTCTCATCATTCTGTCACACCTTATCATCATCGAATCGAACGAATCATATCAAAAGGCCCATACTTTGCCCAACGAATCAACAAAATACCCATTTTCTCCGTAAACCCATCTTCTCCAAGAACCCAAATCGGCAAGAACTCAAAATCGGAAAGCAAAAATGATGCACATGACCTTTTATTGGGGTAAAAAAGTAACCCTTTTGTTCGATTTCTGGAGAACTGATTCATGGGCTAGCTATGCAATTACTTTACTTGCTTGTTTTATCTTCGCCCTATTTTATCAGTATATGGAAGATCGTCGTCAACGATTCAGGATTATCTCTGCCAGTTTCAGGAGGAATTACCCTTCGCCGCCTAGCGCCGCTGTGAATGCTCCCCTTCTTTACACTTTCCCGACCGTCGGCGGTAAGTGGAACTCGGCGAGATTCGCTACGGCGATCGTTTTTGGGATCAATTCGGCAATTGGGTATATGCTTATGTTGGCTGTTATGTCATTCAACGGCGGCGTTTTTGTTGCTATTGTTCTGGGTTTGGCGATCGGATATTTGCTGTTCAGGATCGGCGATGAGGATGATGTCACCGTTGATAATCCTTGTGCCTGTGCTTGATAGTTAATGGGTTTGTTTGTTGTATACTGATTCAATGATAATGAAATATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E207825" ref_strand="+" ref_description="SGN-E207825 [cLEC-32-F22]">
      <seq>caaaaggcccatactttgcccaacgaatcaacaaaatacccattttctccgtaaacccatcttctccaagaacccaaatcggcaagaactcaaaatcggaaagcaaaaatgatgcacatgaccttttattggggtaaaaaagtaacccttttgttcgatttctggagaactgattcatgggctagctatgcaattactttacttgcttgttttatcttcgccctattttatcagtatatggaagatcgtcgtcaacgattcaggattatctctgccagtttcaggaggaattacccttcgccgcctagcgccgctgtgaatgctccccttctttacactttcccgaccgtcggcggtaagtggaactcggcgagattcgctacggcgatcgcttttgggatcaattcggcaattgggtatatgcttatgttggctgttatgtcattcaacggcggcgttattgttgctattggtctgggtttggcgatcggatatttgctgttcaggatcggcgatgaggatgatgtcaccgctgataattcttgtgcctgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="9109" stop="7957"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8809" g_stop="8257" g_length="553"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="553" r_length="553" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E207825" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E207825" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8809" e_stop="8257"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAGGCCCATACTTTGCCCAACGAATCAACAAAATACCCATTTTCTCCGTAAACCCATCTTCTCCAAGAACCCAAATCGGCAAGAACTCAAAATCGGAAAGCAAAAATGATGCACATGACCTTTTATTGGGGTAAAAAAGTAACCCTTTTGTTCGATTTCTGGAGAACTGATTCATGGGCTAGCTATGCAATTACTTTACTTGCTTGTTTTATCTTCGCCCTATTTTATCAGTATATGGAAGATCGTCGTCAACGATTCAGGATTATCTCTGCCAGTTTCAGGAGGAATTACCCTTCGCCGCCTAGCGCCGCTGTGAATGCTCCCCTTCTTTACACTTTCCCGACCGTCGGCGGTAAGTGGAACTCGGCGAGATTCGCTACGGCGATCGTTTTTGGGATCAATTCGGCAATTGGGTATATGCTTATGTTGGCTGTTATGTCATTCAACGGCGGCGTTTTTGTTGCTATTGTTCTGGGTTTGGCGATCGGATATTTGCTGTTCAGGATCGGCGATGAGGATGATGTCACCGTTGATAATCCTTGTGCCTGTG</genome_strand>
        <mrna_strand>CAAAAGGCCCATACTTTGCCCAACGAATCAACAAAATACCCATTTTCTCCGTAAACCCATCTTCTCCAAGAACCCAAATCGGCAAGAACTCAAAATCGGAAAGCAAAAATGATGCACATGACCTTTTATTGGGGTAAAAAAGTAACCCTTTTGTTCGATTTCTGGAGAACTGATTCATGGGCTAGCTATGCAATTACTTTACTTGCTTGTTTTATCTTCGCCCTATTTTATCAGTATATGGAAGATCGTCGTCAACGATTCAGGATTATCTCTGCCAGTTTCAGGAGGAATTACCCTTCGCCGCCTAGCGCCGCTGTGAATGCTCCCCTTCTTTACACTTTCCCGACCGTCGGCGGTAAGTGGAACTCGGCGAGATTCGCTACGGCGATCGCTTTTGGGATCAATTCGGCAATTGGGTATATGCTTATGTTGGCTGTTATGTCATTCAACGGCGGCGTTATTGTTGCTATTGGTCTGGGTTTGGCGATCGGATATTTGCTGTTCAGGATCGGCGATGAGGATGATGTCACCGCTGATAATTCTTGTGCCTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E279654" ref_strand="+" ref_description="SGN-E279654 [cLER-5-E22]">
      <seq>aagaactcaaaatcggaaagcaaaaatgatgcacatgaccttttattggggtaaaaaagtaacccttttgttcgatttctggagaactgattcatgggctagctatgcaattactttacttgcttgttttatcttcgccctattttatcagtatatggaagatcgtcgtcaacgattcaggattatctctgccagtttcaggaggaattacccttcgccgcctagcgccgctgtgaatgctccccttctttacactttcccgaccgtcggcggtaagtggaactcggcgagattcgctacggcgatcgtttttgggatcaattcggcaattgggtatatgcttatgttggctgttatgtcattcaacggcggcgtttttgttgctattgttctgggtttggcgatcggatatttgctgttcaggatcggcgatgaggatgatgtcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="9026" stop="7980"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8726" g_stop="8280" g_length="447"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="447" r_length="447" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E279654" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E279654" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8726" e_stop="8280"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAACTCAAAATCGGAAAGCAAAAATGATGCACATGACCTTTTATTGGGGTAAAAAAGTAACCCTTTTGTTCGATTTCTGGAGAACTGATTCATGGGCTAGCTATGCAATTACTTTACTTGCTTGTTTTATCTTCGCCCTATTTTATCAGTATATGGAAGATCGTCGTCAACGATTCAGGATTATCTCTGCCAGTTTCAGGAGGAATTACCCTTCGCCGCCTAGCGCCGCTGTGAATGCTCCCCTTCTTTACACTTTCCCGACCGTCGGCGGTAAGTGGAACTCGGCGAGATTCGCTACGGCGATCGTTTTTGGGATCAATTCGGCAATTGGGTATATGCTTATGTTGGCTGTTATGTCATTCAACGGCGGCGTTTTTGTTGCTATTGTTCTGGGTTTGGCGATCGGATATTTGCTGTTCAGGATCGGCGATGAGGATGATGTCAC</genome_strand>
        <mrna_strand>AAGAACTCAAAATCGGAAAGCAAAAATGATGCACATGACCTTTTATTGGGGTAAAAAAGTAACCCTTTTGTTCGATTTCTGGAGAACTGATTCATGGGCTAGCTATGCAATTACTTTACTTGCTTGTTTTATCTTCGCCCTATTTTATCAGTATATGGAAGATCGTCGTCAACGATTCAGGATTATCTCTGCCAGTTTCAGGAGGAATTACCCTTCGCCGCCTAGCGCCGCTGTGAATGCTCCCCTTCTTTACACTTTCCCGACCGTCGGCGGTAAGTGGAACTCGGCGAGATTCGCTACGGCGATCGTTTTTGGGATCAATTCGGCAATTGGGTATATGCTTATGTTGGCTGTTATGTCATTCAACGGCGGCGTTTTTGTTGCTATTGTTCTGGGTTTGGCGATCGGATATTTGCTGTTCAGGATCGGCGATGAGGATGATGTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E200054" ref_strand="+" ref_description="SGN-E200054 [cLEC-8-I18]">
      <seq>tcaaaaggcccatactttgcccaacgaatcaacaaaatacccattttctccgtaaacccatcttctccaagaacccaaatcggcaagaactcaaaatcggaaagcaaaaatgatgcacatgaccttttattggggtaaaaaagtaacccttttgttcgatttctggagaactgattcatgggctagctatgcaattactttacttgcttgttttatcttcgccctattttatcagtatatggaagatcgtcgtcaacgattcaggattatctctgccagtttcaggaggaattacccttcgccgcctagcgccgctgtgaatgctccccttctttacactttcccgaccgtcggcggtaagtggaactcggcgagattcgctacggcgatcgtttttgggatcaattcggcaattgggtatatgcttatgttggctgttatgtcattcaacggcggcgtttttgttgctattgttctgggtttggcgatcggatatttgctgttcaggatcggcgatgaggatgatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="9110" stop="7983"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8810" g_stop="8283" g_length="528"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="528" r_length="528" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E200054" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>528</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E200054" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8810" e_stop="8283"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAAAGGCCCATACTTTGCCCAACGAATCAACAAAATACCCATTTTCTCCGTAAACCCATCTTCTCCAAGAACCCAAATCGGCAAGAACTCAAAATCGGAAAGCAAAAATGATGCACATGACCTTTTATTGGGGTAAAAAAGTAACCCTTTTGTTCGATTTCTGGAGAACTGATTCATGGGCTAGCTATGCAATTACTTTACTTGCTTGTTTTATCTTCGCCCTATTTTATCAGTATATGGAAGATCGTCGTCAACGATTCAGGATTATCTCTGCCAGTTTCAGGAGGAATTACCCTTCGCCGCCTAGCGCCGCTGTGAATGCTCCCCTTCTTTACACTTTCCCGACCGTCGGCGGTAAGTGGAACTCGGCGAGATTCGCTACGGCGATCGTTTTTGGGATCAATTCGGCAATTGGGTATATGCTTATGTTGGCTGTTATGTCATTCAACGGCGGCGTTTTTGTTGCTATTGTTCTGGGTTTGGCGATCGGATATTTGCTGTTCAGGATCGGCGATGAGGATGATGT</genome_strand>
        <mrna_strand>TCAAAAGGCCCATACTTTGCCCAACGAATCAACAAAATACCCATTTTCTCCGTAAACCCATCTTCTCCAAGAACCCAAATCGGCAAGAACTCAAAATCGGAAAGCAAAAATGATGCACATGACCTTTTATTGGGGTAAAAAAGTAACCCTTTTGTTCGATTTCTGGAGAACTGATTCATGGGCTAGCTATGCAATTACTTTACTTGCTTGTTTTATCTTCGCCCTATTTTATCAGTATATGGAAGATCGTCGTCAACGATTCAGGATTATCTCTGCCAGTTTCAGGAGGAATTACCCTTCGCCGCCTAGCGCCGCTGTGAATGCTCCCCTTCTTTACACTTTCCCGACCGTCGGCGGTAAGTGGAACTCGGCGAGATTCGCTACGGCGATCGTTTTTGGGATCAATTCGGCAATTGGGTATATGCTTATGTTGGCTGTTATGTCATTCAACGGCGGCGTTTTTGTTGCTATTGTTCTGGGTTTGGCGATCGGATATTTGCTGTTCAGGATCGGCGATGAGGATGATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E354219" ref_strand="+" ref_description="SGN-E354219 [cTOS-16-E12]">
      <seq>aggcccatactttgcccaacgaatcaacaaaatacccattttctccgtaaacccatcttctccaagaacccaaatcggcaagaactcaaaatcggaaagcaaaaatgatgcacatgaccttttattggggtaaaaaagtaacccttttgttcgatttctggagaactgattcatgggctagctatgcaattactttacttgcttgttttatcttcgccctattttatcagtatatggaagatcgtcgtcaacgattcaggattatctctgccagtttcaggaggaattacccttcgccgcctagcgccgctgtgaatgctccccttctttacactttcccgaccgtcggcggtaagtggaactcggcgagattcgctacggcgatcgtttttgggatcaattcggcaattgggtatatgcttatgttggctgttatgtcattcaacggcggcgtttttgttgctattgttctgggtttggcgatcggatatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="9105" stop="8012"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8805" g_stop="8312" g_length="494"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="494" r_length="494" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E354219" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>494</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E354219" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8805" e_stop="8312"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGCCCATACTTTGCCCAACGAATCAACAAAATACCCATTTTCTCCGTAAACCCATCTTCTCCAAGAACCCAAATCGGCAAGAACTCAAAATCGGAAAGCAAAAATGATGCACATGACCTTTTATTGGGGTAAAAAAGTAACCCTTTTGTTCGATTTCTGGAGAACTGATTCATGGGCTAGCTATGCAATTACTTTACTTGCTTGTTTTATCTTCGCCCTATTTTATCAGTATATGGAAGATCGTCGTCAACGATTCAGGATTATCTCTGCCAGTTTCAGGAGGAATTACCCTTCGCCGCCTAGCGCCGCTGTGAATGCTCCCCTTCTTTACACTTTCCCGACCGTCGGCGGTAAGTGGAACTCGGCGAGATTCGCTACGGCGATCGTTTTTGGGATCAATTCGGCAATTGGGTATATGCTTATGTTGGCTGTTATGTCATTCAACGGCGGCGTTTTTGTTGCTATTGTTCTGGGTTTGGCGATCGGATATTTG</genome_strand>
        <mrna_strand>AGGCCCATACTTTGCCCAACGAATCAACAAAATACCCATTTTCTCCGTAAACCCATCTTCTCCAAGAACCCAAATCGGCAAGAACTCAAAATCGGAAAGCAAAAATGATGCACATGACCTTTTATTGGGGTAAAAAAGTAACCCTTTTGTTCGATTTCTGGAGAACTGATTCATGGGCTAGCTATGCAATTACTTTACTTGCTTGTTTTATCTTCGCCCTATTTTATCAGTATATGGAAGATCGTCGTCAACGATTCAGGATTATCTCTGCCAGTTTCAGGAGGAATTACCCTTCGCCGCCTAGCGCCGCTGTGAATGCTCCCCTTCTTTACACTTTCCCGACCGTCGGCGGTAAGTGGAACTCGGCGAGATTCGCTACGGCGATCGTTTTTGGGATCAATTCGGCAATTGGGTATATGCTTATGTTGGCTGTTATGTCATTCAACGGCGGCGTTTTTGTTGCTATTGTTCTGGGTTTGGCGATCGGATATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E312507" ref_strand="+" ref_description="SGN-E312507 [cLEZ-20-L23]">
      <seq>gaagtccgactcacttgttcccgtgttaacgcccctactaaatattaatatatattgatcgtgtaaaagatttaatttcttatgctatcaatgcgagtttgtttctttttttttcccgggtttttactatattaatatttaaatttgtactttgaagttcgaatattaatgaagaggctggtatgaactttaaaatcgtgctaagctatcgataaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="17188" stop="16373"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16888" g_stop="16666" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="223" r_length="223" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E312507" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>223</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E312507" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16888" e_stop="16666"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGTCCGACTCACTTGTTCCCGTGTTAACGCCCCTACTAAATATTAATATATATTGATCGTGTAAAAGATTTAATTTCTTATGCTATCAATGCGAGTTTGTTTCTTTTTTTTTCCCGGGTTTTTACTATATTAATATTTAAATTTGTACTTTGAAGTTCGAATATTAATGAAGAGGCTGGTATGAACTTTAAAATCGTGCTAAGCTATCGATAAATTCTCTA</genome_strand>
        <mrna_strand>GAAGTCCGACTCACTTGTTCCCGTGTTAACGCCCCTACTAAATATTAATATATATTGATCGTGTAAAAGATTTAATTTCTTATGCTATCAATGCGAGTTTGTTTCTTTTTTTTTCCCGGGTTTTTACTATATTAATATTTAAATTTGTACTTTGAAGTTCGAATATTAATGAAGAGGCTGGTATGAACTTTAAAATCGTGCTAAGCTATCGATAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E542813" ref_strand="+" ref_description="SGN-E542813 [TUS-64-E23](-)">
      <seq>ctgatattttaaccgtagccgcaagagacgccacacttgcagtaggtggtccttactggatggttccatatggcaggaaggatggcacagtttccaatgctaaagaagctgatcaattagtcccaatgggtcacgaagtagtcactgatttacttgaattattccaatccaaaggattaaatgttctcgacttggttgtcctctctggagctcacacaattggaagaacaacatgtgaatctctacaatacaggttatacaattataatgggactaagaaatcagatacaagacttgatcatctctacttaaattatttggaaagaaaatgtagatgggcatctgaatatgttgatcttgatgctgttactccaaagaaatttgatgttcaatactacaaaaatctacaaaagggaatgggacttttgttgactgatcaattgttgtataaagattcaagaactgcaccaattgtcactgctttggctactcaaccagatgaatttggaagcctattttcagcatctatggtcaagatgggaaatattcaagattatcttagcaatgatggtgaagtccgactcacttgttcccgtgttaacgcccctactaaatattaatatatattgatcgtgtaaaagatttaatttcttatgctatcaatgcgagtttgtttctttttttttcccgggtttttactatattaatatttaaatttgtactttgaagttcgaatattaatgaagaggctggtatgaactttaaaaaaaaaaaaaaaaaaactcgaggggggcccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="18064" stop="16394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17764" g_stop="17558" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="207" r_length="207" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17557" i_stop="17254" i_length="304">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17253" g_stop="16692" g_length="562"/>
          <reference_exon_boundary r_type="cDNA" r_start="208" r_stop="769" r_length="562" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="770" polyA_stop="783"/>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E542813" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>769</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E542813" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17764" e_stop="17558"/>
          <exon e_start="17253" e_stop="16692"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGATATTTTAACCGTAGCCGCAAGAGACGCCACACTTGCAGTAGGTGGTCCTTACTGGATGGTTCCATATGGCAGGAAGGATGGCACAGTTTCCAATGCTAAAGAAGCTGATCAATTAGTCCCAATGGGTCACGAAGTAGTCACTGATTTACTTGAATTATTCCAATCCAAAGGATTAAATGTTCTCGACTTGGTTGTCCTCTCTGGTCAGTACTTTTTCCATTATCCATGTTTTCTAGCACTATTAAATTTTTAATTGTTAGGTTATATATCTAATCATAGTCTAAAACGTCAAATAATATTTCAATGCAAATTTTAGTTAATCGAACGTTAGATAACGAGGGATCAAAAGTAATATATCCTTATTTCGAATTGAGCTAGCAAATTTTTACCATTAATGATCATAAAAGTATCGTTAAATATTCAATATGATTCCAGAAGATCTAGTTTCGTTGCGATTATATAACTTAATATCAATTTTGTTTTAATTTATGTGTTACATGTATGTAGGAGCTCACACAATTGGAAGAACAACATGTGAATCTCTACAATACAGGTTATACAATTATAATGGGACTAAGAAATCAGATACAAGACTTGATCATCTCTACTTAAATTATTTGGAAAGAAAATGTAGATGGGCATCTGAATATGTTGATCTTGATGCTGTTACTCCAAAGAAATTTGATGTTCAATACTACAAAAATCTACAAAAGGGAATGGGACTTTTGTTGACTGATCAATTGTTGTATAAAGATTCAAGAACTGCACCAATTGTCACTGCTTTGGCTACTCAACCAGATGAATTTGGAAGCCTATTTTCAGCATCTATGGTCAAGATGGGAAATATTCAAGATTATCTTAGCAATGATGGTGAAGTCCGACTCACTTGTTCCCGTGTTAACGCCCCTACTAAATATTAATATATATTGATCGTGTAAAAGATTTAATTTCTTATGCTATCAATGCGAGTTTGTTTCTTTTTTTTTCCCGGGTTTTTACTATATTAATATTTAAATTTGTACTTTGAAGTTCGAATATTAATGAAGAGGCTGGTATGAACTTTAAAATC</genome_strand>
        <mrna_strand>CTGATATTTTAACCGTAGCCGCAAGAGACGCCACACTTGCAGTAGGTGGTCCTTACTGGATGGTTCCATATGGCAGGAAGGATGGCACAGTTTCCAATGCTAAAGAAGCTGATCAATTAGTCCCAATGGGTCACGAAGTAGTCACTGATTTACTTGAATTATTCCAATCCAAAGGATTAAATGTTCTCGACTTGGTTGTCCTCTCTG................................................................................................................................................................................................................................................................................................................GAGCTCACACAATTGGAAGAACAACATGTGAATCTCTACAATACAGGTTATACAATTATAATGGGACTAAGAAATCAGATACAAGACTTGATCATCTCTACTTAAATTATTTGGAAAGAAAATGTAGATGGGCATCTGAATATGTTGATCTTGATGCTGTTACTCCAAAGAAATTTGATGTTCAATACTACAAAAATCTACAAAAGGGAATGGGACTTTTGTTGACTGATCAATTGTTGTATAAAGATTCAAGAACTGCACCAATTGTCACTGCTTTGGCTACTCAACCAGATGAATTTGGAAGCCTATTTTCAGCATCTATGGTCAAGATGGGAAATATTCAAGATTATCTTAGCAATGATGGTGAAGTCCGACTCACTTGTTCCCGTGTTAACGCCCCTACTAAATATTAATATATATTGATCGTGTAAAAGATTTAATTTCTTATGCTATCAATGCGAGTTTGTTTCTTTTTTTTTCCCGGGTTTTTACTATATTAATATTTAAATTTGTACTTTGAAGTTCGAATATTAATGAAGAGGCTGGTATGAACTTTAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E310962" ref_strand="+" ref_description="SGN-E310962 [cLEZ-17-L14]">
      <seq>atatggcaggaaggatggcacagtttccaatgctaaagaagctgatcaattagtcccaatgggtcacgaagtagtcactgatttacttgaattattccaatccaaaggattaaatgttctcgacttggttgtcctctctggagctcacacaattggaagaacaacatgtgaatctctacaatacaggttatacaattataatgggactaagaaatcagatacaagacttgatcatctctacttaaattatttggaaagaaaatgtagatgggcatctgaatatgttgatcttgatgctgttactccaaagaaatttgatgttcaatactacaaaaatctacaaaagggaatgggacttttgttgactgatcaattgttgtataaagattcaagaactgcaccaattgtcactgctttggctactcaaccagatgaatttggaagcctattttcagcatctatggtcaagatgggaaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="17997" stop="16615"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17697" g_stop="17558" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="140" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17557" i_stop="17254" i_length="304">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17253" g_stop="16915" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="479" r_length="339" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E310962" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E310962" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17697" e_stop="17558"/>
          <exon e_start="17253" e_stop="16915"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATGGCAGGAAGGATGGCACAGTTTCCAATGCTAAAGAAGCTGATCAATTAGTCCCAATGGGTCACGAAGTAGTCACTGATTTACTTGAATTATTCCAATCCAAAGGATTAAATGTTCTCGACTTGGTTGTCCTCTCTGGTCAGTACTTTTTCCATTATCCATGTTTTCTAGCACTATTAAATTTTTAATTGTTAGGTTATATATCTAATCATAGTCTAAAACGTCAAATAATATTTCAATGCAAATTTTAGTTAATCGAACGTTAGATAACGAGGGATCAAAAGTAATATATCCTTATTTCGAATTGAGCTAGCAAATTTTTACCATTAATGATCATAAAAGTATCGTTAAATATTCAATATGATTCCAGAAGATCTAGTTTCGTTGCGATTATATAACTTAATATCAATTTTGTTTTAATTTATGTGTTACATGTATGTAGGAGCTCACACAATTGGAAGAACAACATGTGAATCTCTACAATACAGGTTATACAATTATAATGGGACTAAGAAATCAGATACAAGACTTGATCATCTCTACTTAAATTATTTGGAAAGAAAATGTAGATGGGCATCTGAATATGTTGATCTTGATGCTGTTACTCCAAAGAAATTTGATGTTCAATACTACAAAAATCTACAAAAGGGAATGGGACTTTTGTTGACTGATCAATTGTTGTATAAAGATTCAAGAACTGCACCAATTGTCACTGCTTTGGCTACTCAACCAGATGAATTTGGAAGCCTATTTTCAGCATCTATGGTCAAGATGGGAAATA</genome_strand>
        <mrna_strand>ATATGGCAGGAAGGATGGCACAGTTTCCAATGCTAAAGAAGCTGATCAATTAGTCCCAATGGGTCACGAAGTAGTCACTGATTTACTTGAATTATTCCAATCCAAAGGATTAAATGTTCTCGACTTGGTTGTCCTCTCTG................................................................................................................................................................................................................................................................................................................GAGCTCACACAATTGGAAGAACAACATGTGAATCTCTACAATACAGGTTATACAATTATAATGGGACTAAGAAATCAGATACAAGACTTGATCATCTCTACTTAAATTATTTGGAAAGAAAATGTAGATGGGCATCTGAATATGTTGATCTTGATGCTGTTACTCCAAAGAAATTTGATGTTCAATACTACAAAAATCTACAAAAGGGAATGGGACTTTTGTTGACTGATCAATTGTTGTATAAAGATTCAAGAACTGCACCAATTGTCACTGCTTTGGCTACTCAACCAGATGAATTTGGAAGCCTATTTTCAGCATCTATGGTCAAGATGGGAAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E542814" ref_strand="+" ref_description="SGN-E542814 [TUS-64-E23]">
      <seq>tgaagttcatataccctccacaaatatcgtagaatgaagagttttgttttcctcacggcggcgttgtttctggtggccgccgtgtgtgcttcagcatatgatgaggacgatcttccttatgactactacagcaagacctgtcccaagttggagtgtatagtgcacaagaaaatggaggaatggattaaaaaagattattcacttgctcctgctctcatgaggttgcatttccatgattgttttgttaggggatgtgatgcctccatattattagactacgaaggaagtgagaaggatgccaacgtaagcaagacattaaggggattcgaagtaatcgaggatatcaaacgagaattggagaaagagtgtcctaaaacagtatcctgtgctgatattttaaccgtagccgcaagagacgccacacttgcagtaggtggtccttactggatggttccatatggcaggaaggatggcacagtttccaatgctaaagaagctgatcaattagtcccaatgggtcacgaagtagtcactgatttacttgaattattccaatccaaaggattaaatgttctcgacttggttgtcctctctggagctcacacaattggaagaacaacatgtgaatctctacaatacaggttatacaattataatgggactaagaaatcagatacaagacttgatcatctctacttaaattatttggaaagaaaatgtagatgggcatctgaatatgttgatcttgatgctgttactcaaaggaatttgatgttcaatactacaaaaatctacaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="19156" stop="16750"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18856" g_stop="18608" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="249" r_length="249" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18607" i_stop="17904" i_length="704">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17903" g_stop="17558" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="595" r_length="346" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17557" i_stop="17254" i_length="304">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17253" g_stop="17050" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="596" r_stop="798" r_length="203" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E542814" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>799</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E542814" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18856" e_stop="18608"/>
          <exon e_start="17903" e_stop="17558"/>
          <exon e_start="17253" e_stop="17050"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGTTCATATACCCTCCACAAATATCGTAGAATGAAGAGTTTTGTTTTCCTCACGGCGGCGTTGTTTCTGGTGGCCGCCGTGTGTGCTTCAGCATATGATGAGGACGATCTTCCTTATGACTACTACAGCAAGACCTGTCCCAAGTTGGAGTGTATAGTGCACAAGAAAATGGAGGAATGGATTAAAAAAGATTATTCACTTGCTCCTGCTCTCATGAGGTTGCATTTCCATGATTGTTTTGTTAGGGTACGTATTGATCTTACCTATATAGTTTCACTATCTAGGTAATGTACAAAATAATTAAGTTAAATAACACGCCTTTTGTTTTTTCTTTTTTTCTTTATAGTCATTTGATTTTTGAAAATTTATTGATTTGACTAATTCAGATGTGAACCACGTTTGATCAGCTTTTATGGGAATCGCTCCATACTTGGGGATTTCCCATTTTTTGTAAGCTTGAACATGATTGTTGAGGTTATGGTCAAGGGTGTTGAAGGGATCTTATACGTCACATTCTATCCTTGTGCATTTTCTTGTTGAATAATTTATGAGTTAAAAAATGGATAATTTAACCAAAATAAAAAAAGTCTATTAGAAAGTTTCTCTCTTTTTGGGAATTTTTATTTCATATTTCTTTCTAACATTTTTGTACAAATTTACCAATTGATCTTAAATTTCTCATTTTACGATATATTTTATCATAAAAAAAAAACTCATTTTATACTTAATTGATGACATATTTTATAGCGAAAAAAGTCATTAGATACTTAGTACTACAAAATTTCAATGTTCTTATTTCTTATTTAAAAATTAATACGATGCCTCATCACACCTTTATTCAAGTTTGAGACACAACTATTCACCAATTAGTAGATTGTAATATAGAATGCATTAACAAATGCATTTTTTCTATTTAATTTCTAAAAATATTGTTTATGGATGGTACGTAGGGATGTGATGCCTCCATATTATTAGACTACGAAGGAAGTGAGAAGGATGCCAACGTAAGCAAGACATTAAGGGGATTCGAAGTAATCGAGGATATCAAACGAGAATTGGAGAAAGAGTGTCCTAAAACAGTATCCTGTGCTGATATTTTAACCGTAGCCGCAAGAGACGCCACACTTGCAGTAGGTGGTCCTTACTGGATGGTTCCATATGGCAGGAAGGATGGCACAGTTTCCAATGCTAAAGAAGCTGATCAATTAGTCCCAATGGGTCACGAAGTAGTCACTGATTTACTTGAATTATTCCAATCCAAAGGATTAAATGTTCTCGACTTGGTTGTCCTCTCTGGTCAGTACTTTTTCCATTATCCATGTTTTCTAGCACTATTAAATTTTTAATTGTTAGGTTATATATCTAATCATAGTCTAAAACGTCAAATAATATTTCAATGCAAATTTTAGTTAATCGAACGTTAGATAACGAGGGATCAAAAGTAATATATCCTTATTTCGAATTGAGCTAGCAAATTTTTACCATTAATGATCATAAAAGTATCGTTAAATATTCAATATGATTCCAGAAGATCTAGTTTCGTTGCGATTATATAACTTAATATCAATTTTGTTTTAATTTATGTGTTACATGTATGTAGGAGCTCACACAATTGGAAGAACAACATGTGAATCTCTACAATACAGGTTATACAATTATAATGGGACTAAGAAATCAGATACAAGACTTGATCATCTCTACTTAAATTATTTGGAAAGAAAATGTAGATGGGCATCTGAATATGTTGATCTTGATGCTGTTACTCCAAAGAAATTTGATGTTCAATACTACAAAAATCTACAAA</genome_strand>
        <mrna_strand>TGAAGTTCATATACCCTCCACAAATATCGTAGAATGAAGAGTTTTGTTTTCCTCACGGCGGCGTTGTTTCTGGTGGCCGCCGTGTGTGCTTCAGCATATGATGAGGACGATCTTCCTTATGACTACTACAGCAAGACCTGTCCCAAGTTGGAGTGTATAGTGCACAAGAAAATGGAGGAATGGATTAAAAAAGATTATTCACTTGCTCCTGCTCTCATGAGGTTGCATTTCCATGATTGTTTTGTTAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGTGATGCCTCCATATTATTAGACTACGAAGGAAGTGAGAAGGATGCCAACGTAAGCAAGACATTAAGGGGATTCGAAGTAATCGAGGATATCAAACGAGAATTGGAGAAAGAGTGTCCTAAAACAGTATCCTGTGCTGATATTTTAACCGTAGCCGCAAGAGACGCCACACTTGCAGTAGGTGGTCCTTACTGGATGGTTCCATATGGCAGGAAGGATGGCACAGTTTCCAATGCTAAAGAAGCTGATCAATTAGTCCCAATGGGTCACGAAGTAGTCACTGATTTACTTGAATTATTCCAATCCAAAGGATTAAATGTTCTCGACTTGGTTGTCCTCTCTG................................................................................................................................................................................................................................................................................................................GAGCTCACACAATTGGAAGAACAACATGTGAATCTCTACAATACAGGTTATACAATTATAATGGGACTAAGAAATCAGATACAAGACTTGATCATCTCTACTTAAATTATTTGGAAAGAAAATGTAGATGGGCATCTGAATATGTTGATCTTGATGCTGTTACT-CAAAGGAATTTGATGTTCAATACTACAAAAATCTACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E301827" ref_strand="+" ref_description="SGN-E301827 [cLEW-25-D18]">
      <seq>gaagttcatataccctccacaaatatcgtagaatgaagagttttgttttcctcacggcggcgttgtttctggtggccgccgtgtgtgcttcagcatatgatgaggacgatcttccttatgactactacagcaagacctgtcccaagttggagtgtatagtgcacaagaaaatggaggaatggattaaaaaagattattcacttgctcctgctctcatgaggttgcatttccatgattgttttgttaggggatgtgatgcctccatattattagactacgaaggaagtgagaaggatgccaacgtaagcaagacattaaggggattcgaagtaatcgaggatatcaaacgagaattggagaaagagtgtcctaaaacagtatcctgtgctgatattttaaccgtagccgcaagagacgccacacttgcagtaggtggtccttactggatggttccatatggcaggaaggatggcacagtttccaatgctaaagaagctgatcaattagtcccaatgggtcacgaagtagtcactgatttacttgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="19155" stop="17306"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18855" g_stop="18608" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="248" r_length="248" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18607" i_stop="17904" i_length="704">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17903" g_stop="17606" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="546" r_length="298" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E301827" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E301827" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18855" e_stop="18608"/>
          <exon e_start="17903" e_stop="17606"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGTTCATATACCCTCCACAAATATCGTAGAATGAAGAGTTTTGTTTTCCTCACGGCGGCGTTGTTTCTGGTGGCCGCCGTGTGTGCTTCAGCATATGATGAGGACGATCTTCCTTATGACTACTACAGCAAGACCTGTCCCAAGTTGGAGTGTATAGTGCACAAGAAAATGGAGGAATGGATTAAAAAAGATTATTCACTTGCTCCTGCTCTCATGAGGTTGCATTTCCATGATTGTTTTGTTAGGGTACGTATTGATCTTACCTATATAGTTTCACTATCTAGGTAATGTACAAAATAATTAAGTTAAATAACACGCCTTTTGTTTTTTCTTTTTTTCTTTATAGTCATTTGATTTTTGAAAATTTATTGATTTGACTAATTCAGATGTGAACCACGTTTGATCAGCTTTTATGGGAATCGCTCCATACTTGGGGATTTCCCATTTTTTGTAAGCTTGAACATGATTGTTGAGGTTATGGTCAAGGGTGTTGAAGGGATCTTATACGTCACATTCTATCCTTGTGCATTTTCTTGTTGAATAATTTATGAGTTAAAAAATGGATAATTTAACCAAAATAAAAAAAGTCTATTAGAAAGTTTCTCTCTTTTTGGGAATTTTTATTTCATATTTCTTTCTAACATTTTTGTACAAATTTACCAATTGATCTTAAATTTCTCATTTTACGATATATTTTATCATAAAAAAAAAACTCATTTTATACTTAATTGATGACATATTTTATAGCGAAAAAAGTCATTAGATACTTAGTACTACAAAATTTCAATGTTCTTATTTCTTATTTAAAAATTAATACGATGCCTCATCACACCTTTATTCAAGTTTGAGACACAACTATTCACCAATTAGTAGATTGTAATATAGAATGCATTAACAAATGCATTTTTTCTATTTAATTTCTAAAAATATTGTTTATGGATGGTACGTAGGGATGTGATGCCTCCATATTATTAGACTACGAAGGAAGTGAGAAGGATGCCAACGTAAGCAAGACATTAAGGGGATTCGAAGTAATCGAGGATATCAAACGAGAATTGGAGAAAGAGTGTCCTAAAACAGTATCCTGTGCTGATATTTTAACCGTAGCCGCAAGAGACGCCACACTTGCAGTAGGTGGTCCTTACTGGATGGTTCCATATGGCAGGAAGGATGGCACAGTTTCCAATGCTAAAGAAGCTGATCAATTAGTCCCAATGGGTCACGAAGTAGTCACTGATTTACTTGAAT</genome_strand>
        <mrna_strand>GAAGTTCATATACCCTCCACAAATATCGTAGAATGAAGAGTTTTGTTTTCCTCACGGCGGCGTTGTTTCTGGTGGCCGCCGTGTGTGCTTCAGCATATGATGAGGACGATCTTCCTTATGACTACTACAGCAAGACCTGTCCCAAGTTGGAGTGTATAGTGCACAAGAAAATGGAGGAATGGATTAAAAAAGATTATTCACTTGCTCCTGCTCTCATGAGGTTGCATTTCCATGATTGTTTTGTTAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGTGATGCCTCCATATTATTAGACTACGAAGGAAGTGAGAAGGATGCCAACGTAAGCAAGACATTAAGGGGATTCGAAGTAATCGAGGATATCAAACGAGAATTGGAGAAAGAGTGTCCTAAAACAGTATCCTGTGCTGATATTTTAACCGTAGCCGCAAGAGACGCCACACTTGCAGTAGGTGGTCCTTACTGGATGGTTCCATATGGCAGGAAGGATGGCACAGTTTCCAATGCTAAAGAAGCTGATCAATTAGTCCCAATGGGTCACGAAGTAGTCACTGATTTACTTGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E314140" ref_strand="+" ref_description="SGN-E314140 [cTOA-21-O15]">
      <seq>ctctatattctctctctttatctccttcattccttttttttttcttttttccgtgtggaattttctgtttgtgaagaatgttgattgattaacttatcaagatgaaaaaacagagaaataaccggcgagacttgcgttctctgcgtgtttgacgttttaattacccaaaaacaacagagaggccagacccccttttcttctctttgagagaaacaaatgggttgttatttttgatattgttgaatgaatgtatgtttggttgtttttaattctgctaatttcttcttcagacgagtcaattttgagagatgggttgttttcaatttgtaatgttttactttggggaacgttgaaatgttcaaagttttctcctttttgtcaacaaacattaaatatagcattcttgattgagcaagtttcgcaagaaatggcatcttctcaggtagaaattgcctcttcttcttcatttggtcatgtacttagagatcgtaacaggcgtgatcgatgtactcatagggattccaatgttttccagaagaatctaaaagaatttggtcatacacatatccattcttgtatttcttcaagtcaacccacaaatacgaatactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="23817" stop="25027"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24117" g_stop="24727" g_length="611"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="611" r_length="611" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E314140" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>611</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E314140" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24117" e_stop="24727"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTATATTCTCTCTCTTTATCTCCTTCATTCCTTTTTTTTTTCTTTTTTCCGTGTGGAATTTTCTGTTTGTGAAGAATGTTGATTGATTAACTTATCAAGATGAAAAAACAGAGAAATAACCGGCGAGACTTGCGTTCTCTGCGTGTTTGACGTTTTAATTACCCAAAAACAACAGAGAGGCCAGACCCCCTTTTCTTCTCTTTGAGAGAAACAAATGGGTTGTTATTTTTGATATTGTTGAATGAATGTATGTTTGGTTGTTTTTAATTCTGCTAATTTCTTCTTCAGACGAGTCAATTTTGAGAGATGGGTTGTTTTCAATTTGTAATGTTTTACTTTGGGGAACGTTGAAATGTTCAAAGTTTTCTCCTTTTTGTCAACAAACATTAAATATAGCATTCTTGATTGAGCAAGTTTCGCAAGAAATGGCATCTTCTCAGGTAGAAATTGCCTCTTCTTCTTCATTTGGTCATGTACTTAGAGATCGTAACAGGCGTGATCGATGTACTCATAGGGATTCCAATGTTTTCCAGAAGAATCTAAAAGATTTGGTCCATACACATATCCATTCTTGTATTTCTTCAAGTCAACCCACAAATACGAATACTC</genome_strand>
        <mrna_strand>CTCTATATTCTCTCTCTTTATCTCCTTCATTCCTTTTTTTTTTCTTTTTTCCGTGTGGAATTTTCTGTTTGTGAAGAATGTTGATTGATTAACTTATCAAGATGAAAAAACAGAGAAATAACCGGCGAGACTTGCGTTCTCTGCGTGTTTGACGTTTTAATTACCCAAAAACAACAGAGAGGCCAGACCCCCTTTTCTTCTCTTTGAGAGAAACAAATGGGTTGTTATTTTTGATATTGTTGAATGAATGTATGTTTGGTTGTTTTTAATTCTGCTAATTTCTTCTTCAGACGAGTCAATTTTGAGAGATGGGTTGTTTTCAATTTGTAATGTTTTACTTTGGGGAACGTTGAAATGTTCAAAGTTTTCTCCTTTTTGTCAACAAACATTAAATATAGCATTCTTGATTGAGCAAGTTTCGCAAGAAATGGCATCTTCTCAGGTAGAAATTGCCTCTTCTTCTTCATTTGGTCATGTACTTAGAGATCGTAACAGGCGTGATCGATGTACTCATAGGGATTCCAATGTTTTCCAGAAGAATCTAAAAGAATTTGGTCATACACATATCCATTCTTGTATTTCTTCAAGTCAACCCACAAATACGAATACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E301120" ref_strand="+" ref_description="SGN-E301120 [cLEW-22-G17]">
      <seq>tcaagtagaaattgcctcttcttcttcatttggtcatgtacttagagatcgtaacaggcgtgatcgatgtactcatagggattccaatgttttccagaagaatctaaaagatttggtccatacacatatccattcttgtatttcttcaagtcaacccacaaatacgaatactcattcttcggatgccaatgaaaattcccggcaacaccgacatgttgattatgcagatttatgggttcataaaccgcaatgggacaacaatgagaacactcctacaaccgttgataaatgggatagagaaatggtgatttcttcaaggccaacaaaacagaaaggagaagcgcttgaaactaccaccgcaaccaccgtcgtcgaagttcctaattcaggcggtgtttctactcttgtccgacggtggagggattttgaaacggtgtctaagagcgtgaatttggggaacaattcgaattcgaatccgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="24255" stop="25334"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24555" g_stop="25034" g_length="480"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="480" r_length="480" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E301120" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E301120" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24555" e_stop="25034"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGGTAGAAATTGCCTCTTCTTCTTCATTTGGTCATGTACTTAGAGATCGTAACAGGCGTGATCGATGTACTCATAGGGATTCCAATGTTTTCCAGAAGAATCTAAAAGATTTGGTCCATACACATATCCATTCTTGTATTTCTTCAAGTCAACCCACAAATACGAATACTCATTCTTCGGATGCCAATGAAAATTCCCGGCAACACCGACATGTTGATTATGCAGATTTATGGGTTCATAAACCGCAATGGGACAACAATGAGAACACTCCTACAACCGTTGATAAATGGGATAGAGAAATGGTGATTTCTTCAAGGCCAACAAAACAGAAAGGAGAAGCGCTTGAAACTACCACCGCAACCACCGTCGTCGAAGTTCCTAATTCAGGCGGTGTTTCTACTCTTGTCCGACGGTGGAGGGATTTTGAAACGGTGTCTAAGAGCGTGAATTTGGGGAACAATTCGAATTCGAATCCGAG</genome_strand>
        <mrna_strand>TCAAGTAGAAATTGCCTCTTCTTCTTCATTTGGTCATGTACTTAGAGATCGTAACAGGCGTGATCGATGTACTCATAGGGATTCCAATGTTTTCCAGAAGAATCTAAAAGATTTGGTCCATACACATATCCATTCTTGTATTTCTTCAAGTCAACCCACAAATACGAATACTCATTCTTCGGATGCCAATGAAAATTCCCGGCAACACCGACATGTTGATTATGCAGATTTATGGGTTCATAAACCGCAATGGGACAACAATGAGAACACTCCTACAACCGTTGATAAATGGGATAGAGAAATGGTGATTTCTTCAAGGCCAACAAAACAGAAAGGAGAAGCGCTTGAAACTACCACCGCAACCACCGTCGTCGAAGTTCCTAATTCAGGCGGTGTTTCTACTCTTGTCCGACGGTGGAGGGATTTTGAAACGGTGTCTAAGAGCGTGAATTTGGGGAACAATTCGAATTCGAATCCGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E312920" ref_strand="+" ref_description="SGN-E312920 [cTOA-8-L18]">
      <seq>tgactccataagcctctcgagagaagcagcggagaacacgccaggaaaaccggaattccacaccaaatcagcaaagagtacagaacaaaggtaataatgctgtaaaagttggaagtgaattagcatcccacaagcaaagagaagggaaccagaagcaggagattatcagagagagtgctgcaatgcagcctggtgtagctgactcaagaagcaatagcagtcctaaatccgaaattgcttctacatctacacgagaggatcatcctgagccgattgacccaatgactctctgcataaatgtgatagatagcaatacacaaattggaaaagtttttccatccaatcaactgcaagaggagaatccccatggggaagtcaataagaaaataagtccccgaatgatgacaacaaatgtaaaagctactaactcatcaaattcccagaaagaaatgtcaattcatatccgacattctgacagttcttatagtccgaaacataatgaggtagactgtagtcctcaagcagttagccccagtttactacattgtacttcacaactgcacagctcagatattccccatgaccaagctagctgggaaaatgcaagctgtcaaactaaccatgacaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="26146" stop="27374"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26446" g_stop="27074" g_length="629"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="630" r_length="630" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E312920" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>629</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E312920" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26446" e_stop="27074"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACTCCAGAAGCCTCTCGAGAGAAGCAGCAGAGAACAC-CCAGGAAAACCGGAATTCCACACCAAATCAGCAAAGAGTACAGAACAAAGGTAATAATGCTGTAAAAGTTGGAAGTGAATTAGCATCCCACAAGCAAAGAGAAGGGAACCAGAAGCAGGAGATTATCAGAGAGAGTGCTGCAATGCAGCCTGGTGTAGCTGACTCAAGAAGCAATAGCAGTCCTAAATCCGAAATTGCTTCTACATCTACACGAGAGGATCATCCTGAGCCGATTGACCCAATGACTCTCTGCATAAATGTGATAGATAGCAATACACAAATTGGAAAAGTTTTTCCATCCAATCAACTGCAAGAGGAGAATCCCCATGGGGAAGTCAATAAGAAAATAAGTCCCCGAATGATGACAACAAATGTAAAAGCTACTAACTCATCAAATTCCCAGAAAGAAATGTCAATTCATATCCGACATTCTGACAGTTCTTATAGTCCGAAACATAATGAGGTAGACTGTAGTCCTCAAGCAGTTAGCCCCAGTTTACTACATTGTACTTCACAACTGCACAGCTCAGATATTCCCCATGACCAAGCTAGCTGGGAAAATGCAAGCTGTCAAGCTAACCATGACAAGT</genome_strand>
        <mrna_strand>TGACTCCATAAGCCTCTCGAGAGAAGCAGCGGAGAACACGCCAGGAAAACCGGAATTCCACACCAAATCAGCAAAGAGTACAGAACAAAGGTAATAATGCTGTAAAAGTTGGAAGTGAATTAGCATCCCACAAGCAAAGAGAAGGGAACCAGAAGCAGGAGATTATCAGAGAGAGTGCTGCAATGCAGCCTGGTGTAGCTGACTCAAGAAGCAATAGCAGTCCTAAATCCGAAATTGCTTCTACATCTACACGAGAGGATCATCCTGAGCCGATTGACCCAATGACTCTCTGCATAAATGTGATAGATAGCAATACACAAATTGGAAAAGTTTTTCCATCCAATCAACTGCAAGAGGAGAATCCCCATGGGGAAGTCAATAAGAAAATAAGTCCCCGAATGATGACAACAAATGTAAAAGCTACTAACTCATCAAATTCCCAGAAAGAAATGTCAATTCATATCCGACATTCTGACAGTTCTTATAGTCCGAAACATAATGAGGTAGACTGTAGTCCTCAAGCAGTTAGCCCCAGTTTACTACATTGTACTTCACAACTGCACAGCTCAGATATTCCCCATGACCAAGCTAGCTGGGAAAATGCAAGCTGTCAAACTAACCATGACAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E325292" ref_strand="+" ref_description="SGN-E325292 [cTOC-1-H1]">
      <seq>tcagatattccccatgaccaagctagctgggaaaatgcaagctgtcaagctaaccatgacaagtcgctggaatttttagagacatcaagatctcccaaggatagtgaacaaagtgtccatagagaagaacacgatgcaaataaactgcagcatgcaggaactagtaatgagtggtctagtgagagcaccaaacctcaaagtgactgtgaagaggaagctaccaaccaaaatctagtggacagtgattgtggctgggtaagtgattattcgcacacgccaagtggatgggatgaactacagtctaactaccagcagcaattagaatccaaccaagactggataaatgatgtttctcgtccacgtgaagagtgggaaggtcttaggcaagaaagataccaagagatgcttgatcccttcctagagaatcatgatattcgccaacttcttaacagaaaaagtgtttcaatctttctcaacagtggtttgagagacaagatagatcaactaatggcgtctcgctcacaagaactacctaatgcaaggagcggccagcttgagaaaaaagtaggggcacgtatgactaaagaatggggcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="26711" stop="28528"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27011" g_stop="27462" g_length="452"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="452" r_length="452" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27463" i_stop="28084" i_length="622">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28085" g_stop="28228" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="453" r_stop="596" r_length="144" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E325292" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E325292" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27011" e_stop="27462"/>
          <exon e_start="28085" e_stop="28228"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGATATTCCCCATGACCAAGCTAGCTGGGAAAATGCAAGCTGTCAAGCTAACCATGACAAGTCGCTGGAATTTTTAGAGACATCAAGATCTCCCAAGGATAGTGAACAAAGTGTCCATAGAGAAGAACACGATGCAAATAAACTGCAGCATGCAGGAACTAGTAATGAGTGGTCTAGTGAGAGCACCAAACCTCAAAGTGACTGTGAAGAGGAAGCTACCAACCAAAATCTAGTGGACAGTGATTGTGGCTGGGTAAGTGATTATTCGCACACGCCAAGTGGATGGGATGAACTACAGTCTAACTACCAGCAGCAATTAGAATCCAACCAAGACTGGATAAATGATGTTTCTCGTCCACGTGAAGAGTGGGAAGGTCTTAGGCAAGAAAGATACCAAGAGATGCTTGATCCCTTCCTAGAGAATCATGATATTCGCCAACTTCTTAACAGGTAATTGCAAATTCCTTGCATCTGATCTGAGACTTATCATATATATATTTATTCTTGTCATTATACAATAGTTGGGTTTAAGTTTATTTGGGTATTTATGTACGATCAATACGATCCAAAGACAGTTCCCCTGCCTGCATTAATTAAGCATAAAATAATCAAGGGAGAATCAATAACAAACCACTAGAATGAGAATCTGATTTTTACAAAGTGTATCAGATAGAAACCATTGTTACAATACAAAGGTGCCATAGACATAGACAAAGTTAATAAGAATGAAGGCGATGACAGAAGTGATTCTACCTCAGAATATAATTTTCACTTAGTGTATGGATCATTTCTGTACTTGTCCGTGCTGGTTTGGAGATCATCTCTGAGAACTTACTGACTTTAACATGTTAAAGAATGTGAAACGGATTTTGATCGAGCTGGGATACGTGTAAAAGAACTTTTTGCAATTTGGAAAAGGAAGTCATTGTTCCCTGCTTACCAAGGGGAAGTGATAATTGAAAATAGAGTCTTTGTATCTCCTTTTGCTGTCATAAGATATTAATTACTCAGCTTTTGTAGTATAAACATAGTTAATGATTTGCACTTGCTTTTGTCTTTCATAAATGTGCAGAAAAAGTGTTTCAATCTTTCTCAACAGTGGTTTGAGAGACAAGATAGATCAACTAATGGCGTCTCGCTCACAAGAACTACCTAATGCAAGGAGCGGCCAGCTTGAGAAAAAAGTAGGGGCACGTATGACTAAAGAATGGGGCAA</genome_strand>
        <mrna_strand>TCAGATATTCCCCATGACCAAGCTAGCTGGGAAAATGCAAGCTGTCAAGCTAACCATGACAAGTCGCTGGAATTTTTAGAGACATCAAGATCTCCCAAGGATAGTGAACAAAGTGTCCATAGAGAAGAACACGATGCAAATAAACTGCAGCATGCAGGAACTAGTAATGAGTGGTCTAGTGAGAGCACCAAACCTCAAAGTGACTGTGAAGAGGAAGCTACCAACCAAAATCTAGTGGACAGTGATTGTGGCTGGGTAAGTGATTATTCGCACACGCCAAGTGGATGGGATGAACTACAGTCTAACTACCAGCAGCAATTAGAATCCAACCAAGACTGGATAAATGATGTTTCTCGTCCACGTGAAGAGTGGGAAGGTCTTAGGCAAGAAAGATACCAAGAGATGCTTGATCCCTTCCTAGAGAATCATGATATTCGCCAACTTCTTAACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAGTGTTTCAATCTTTCTCAACAGTGGTTTGAGAGACAAGATAGATCAACTAATGGCGTCTCGCTCACAAGAACTACCTAATGCAAGGAGCGGCCAGCTTGAGAAAAAAGTAGGGGCACGTATGACTAAAGAATGGGGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E303160" ref_strand="+" ref_description="SGN-E303160 [cLEX-5-P13]">
      <seq>gactgtgaagaggaagctaccaaccaaaatctagcgggcagtgattgtggctgggtcagtgattattcgcacacgccaagcgcatgggatgaactacagtctaactaccagcggccattagaatccaaccaacactggataaatgatgattctcatccacgtgaagagtgggaaggtcttaggcaagaaagataccaagagatgcttgatcccttcctagagaatcatgatattcgccaacttctgaacagaaaaagtgtttcaatctttctcaacagtggtttgagagacaagatagatcaactaatggcgtctcgctcacaagaactacctaatgcaaggagcggccagcttgagaaaaaagtaggggcacgtatgactaaagaatggggcaaggaggaggaagtgatatcacatgtagaaacactagcagccggggttgatgatgatgacgaagaagcgtactcaggttatgaggatgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="26912" stop="28616"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27212" g_stop="27462" g_length="251"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="251" r_length="251" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27463" i_stop="28084" i_length="622">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28085" g_stop="28316" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="483" r_length="232" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E303160" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>483</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E303160" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27212" e_stop="27462"/>
          <exon e_start="28085" e_stop="28316"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTGTGAAGAGGAAGCTACCAACCAAAATCTAGTGGACAGTGATTGTGGCTGGGTAAGTGATTATTCGCACACGCCAAGTGGATGGGATGAACTACAGTCTAACTACCAGCAGCAATTAGAATCCAACCAAGACTGGATAAATGATGTTTCTCGTCCACGTGAAGAGTGGGAAGGTCTTAGGCAAGAAAGATACCAAGAGATGCTTGATCCCTTCCTAGAGAATCATGATATTCGCCAACTTCTTAACAGGTAATTGCAAATTCCTTGCATCTGATCTGAGACTTATCATATATATATTTATTCTTGTCATTATACAATAGTTGGGTTTAAGTTTATTTGGGTATTTATGTACGATCAATACGATCCAAAGACAGTTCCCCTGCCTGCATTAATTAAGCATAAAATAATCAAGGGAGAATCAATAACAAACCACTAGAATGAGAATCTGATTTTTACAAAGTGTATCAGATAGAAACCATTGTTACAATACAAAGGTGCCATAGACATAGACAAAGTTAATAAGAATGAAGGCGATGACAGAAGTGATTCTACCTCAGAATATAATTTTCACTTAGTGTATGGATCATTTCTGTACTTGTCCGTGCTGGTTTGGAGATCATCTCTGAGAACTTACTGACTTTAACATGTTAAAGAATGTGAAACGGATTTTGATCGAGCTGGGATACGTGTAAAAGAACTTTTTGCAATTTGGAAAAGGAAGTCATTGTTCCCTGCTTACCAAGGGGAAGTGATAATTGAAAATAGAGTCTTTGTATCTCCTTTTGCTGTCATAAGATATTAATTACTCAGCTTTTGTAGTATAAACATAGTTAATGATTTGCACTTGCTTTTGTCTTTCATAAATGTGCAGAAAAAGTGTTTCAATCTTTCTCAACAGTGGTTTGAGAGACAAGATAGATCAACTAATGGCGTCTCGCTCACAAGAACTACCTAATGCAAGGAGCGGCCAGCTTGAGAAAAAAGTAGGGGCACGTATGACTAAAGAATGGGGCAAGGAGGAGGAAGTGATATCACATATAGAAACACGAGCAGCCGGGGTTGATGATGATGAGGAAGAAGCGTACTCAGGTTATGAGGATGAC</genome_strand>
        <mrna_strand>GACTGTGAAGAGGAAGCTACCAACCAAAATCTAGCGGGCAGTGATTGTGGCTGGGTCAGTGATTATTCGCACACGCCAAGCGCATGGGATGAACTACAGTCTAACTACCAGCGGCCATTAGAATCCAACCAACACTGGATAAATGATGATTCTCATCCACGTGAAGAGTGGGAAGGTCTTAGGCAAGAAAGATACCAAGAGATGCTTGATCCCTTCCTAGAGAATCATGATATTCGCCAACTTCTGAACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAGTGTTTCAATCTTTCTCAACAGTGGTTTGAGAGACAAGATAGATCAACTAATGGCGTCTCGCTCACAAGAACTACCTAATGCAAGGAGCGGCCAGCTTGAGAAAAAAGTAGGGGCACGTATGACTAAAGAATGGGGCAAGGAGGAGGAAGTGATATCACATGTAGAAACACTAGCAGCCGGGGTTGATGATGATGACGAAGAAGCGTACTCAGGTTATGAGGATGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E315096" ref_strand="+" ref_description="SGN-E315096 [cTOA-24-E9]">
      <seq>agagatatcacatatagaaacacgagcagccggggttgatgatgatgaggaagaagcgtactcaggttatgaggatgactttgaagatgataataatccaattagacaacaataccttaaacctgaggaattagttgatcagaacaaagcttcacacactttacagtcgtggagaaataatcaggacactttaccatcatggagtaatgatcaagacaggggtgtcagtgacgactcctatcaccgtccctctaattctttaccacagcctgaattatccaacatttactctcatcacaatcaacaaagctcctccacctccactagacacccttcaatcgaaatggaactgatatatgaattgcgaggacacatggagcaactccaccaagagatttttgaaatacgaagatcaataaacagttgcatgaacatgcaaatgaatttacaacattccatcaaggacgaggttgcagctgcaataattcagtcaggtccagtgattgggagtaactcggataagaagggtgcaaacatagcaaattgctgtatttgttatgagcagcaagttgattctctcctttacaggtgtgggcacatgtgcacctggtttcaggtgtgcccatgaattgctttggggcaccggaaaatgtccgatatgtgnaaccctattatagatgttgtccgtgctatatacactcatgacgtacggttaaccggattttgntctgctgatgtctactttttgcccatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="27938" stop="29834"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28238" g_stop="28577" g_length="340"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="340" r_length="340" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28578" i_stop="28664" i_length="87">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.700" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28665" g_stop="28818" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="494" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28819" i_stop="29173" i_length="355">
            <donor d_prob="0.710" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29174" g_stop="29267" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="495" r_stop="588" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29268" i_stop="29364" i_length="97">
            <donor d_prob="0.563" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29365" g_stop="29530" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="589" r_stop="751" r_length="163" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E315096" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>754</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E315096" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28238" e_stop="28577"/>
          <exon e_start="28665" e_stop="28818"/>
          <exon e_start="29174" e_stop="29267"/>
          <exon e_start="29365" e_stop="29530"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTGATATCACATATAGAAACACGAGCAGCCGGGGTTGATGATGATGAGGAAGAAGCGTACTCAGGTTATGAGGATGACTTTGAAGATGATAATAATCCAATTAGACAACAATACCTTAAACCTGAGGAATTAGTTGATCAGAACAAAGCTTCACACACTTTACAGTCGTGGAGAAATAATCAGGACACTTTACCATCATGGAGTAATGATCAAGACAGGGGTGTCAGTGACGACTCCTATCACCGTCCCTCTAATTCTTTACCACAGCCTGAATTATCCAACATTTACTCTCATCACAATCAACAAAGCTCCTCCACCTCCACTAGACACCCTTCAATCGTAAGTTTTCTCTTTTTTCTTTTACTTGCAATGACTTGCCAGATATTCCTGAGTTTGAGACTAGTCATAACGACATGGCATTAACAGGAAATGGAACTGATATATGAATTGCGAGGACACATGGAGCAACTCCACCAAGAGATTTTTGAAATACGAAGATCAATAAACAGTTGCATGAACATGCAAATGAATTTACAACATTCCATCAAGGACGAGGTTGCAGCTGCAATAATTCAGTCAGGTGTGTTGGTTGACTGAAATCTGAATATAAGATACTTACCATCATCTATCATAAAACTATGATTTTTCTGTGCGTCTTTTCCAACTTCATAAAACCCTTTGTAACCTGAAAGAAAAACTTGATAGGTGAAATACCCAAAGGTGAAGTCGTTTCACTTCTTATATTATTTGCCTTATTGAATACTTTTCCTCGGGGGATAAGCTTACCTTATTGAACTATGTGTTGAACCTCACAATCTTACAAGTTCCAAGATTGGGCTTCACTTATGAGCTTCATCTACATGTGATCTTTTTTTTTTCCGTCTATTTCAATTTCGTTTCTTTAGAGAGAGTGTGAACGGAATTTTGTAATGCAGGTCCAGTGATTGGGAGTAACTCGGATAAGAAGGGTGCAAACATAGCAAATTGCTGTATTTGTTATGAGCAGCAAGTTGATTCTCTCCTTTACAGGTACTTGGCATTGATTGTAGCAAGAAGTTTTCACTTGGGCAACTTAAAAGTTCGTTCGTTAGAAATAAGTTTGGGAACATTTGTCCTTAATTTTCAGGTGTGGGCACATGTGCACCT-GTTTCAGGTGTGCCCATGAATTGCTTTGGGGCACCGGAAAATGTCCGATATGTGAAACCCCTATTATAGATGTTGTCCGTGCATATATACACTCATGACGTACAGGTTAACCGGATTTTGTTCTGCTGATGTCTAACTTTTTGCCC</genome_strand>
        <mrna_strand>AGAGATATCACATATAGAAACACGAGCAGCCGGGGTTGATGATGATGAGGAAGAAGCGTACTCAGGTTATGAGGATGACTTTGAAGATGATAATAATCCAATTAGACAACAATACCTTAAACCTGAGGAATTAGTTGATCAGAACAAAGCTTCACACACTTTACAGTCGTGGAGAAATAATCAGGACACTTTACCATCATGGAGTAATGATCAAGACAGGGGTGTCAGTGACGACTCCTATCACCGTCCCTCTAATTCTTTACCACAGCCTGAATTATCCAACATTTACTCTCATCACAATCAACAAAGCTCCTCCACCTCCACTAGACACCCTTCAATC.......................................................................................GAAATGGAACTGATATATGAATTGCGAGGACACATGGAGCAACTCCACCAAGAGATTTTTGAAATACGAAGATCAATAAACAGTTGCATGAACATGCAAATGAATTTACAACATTCCATCAAGGACGAGGTTGCAGCTGCAATAATTCAGTCAG...................................................................................................................................................................................................................................................................................................................................................................GTCCAGTGATTGGGAGTAACTCGGATAAGAAGGGTGCAAACATAGCAAATTGCTGTATTTGTTATGAGCAGCAAGTTGATTCTCTCCTTTACAG.................................................................................................GTGTGGGCACATGTGCACCTGGTTTCAGGTGTGCCCATGAATTGCTTTGGGGCACCGGAAAATGTCCGATATGTGNAA-CCCTATTATAGATGTTGTCCGTGC-TATATACACTCATGACGTAC-GGTTAACCGGATTTTGNTCTGCTGATGTCT-ACTTTTTGCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E315130" ref_strand="+" ref_description="SGN-E315130 [cTOA-24-E10]">
      <seq>agagatatcacatatagaaacacgagcagccggggttgatgatgatgaggaagaagcgtactcaggttatgaggatgactttgaagatgataataatccaattagacaacaataccttaaacctgaggaattagttgatcagaacaaagcttcacacactttacagtcgtggagaaataatcaggacactttaccatcatggagtaatgatcaagacaggggtgtcagtgacgactcctatcaccgtccctctaattctttaccacagcctgaattatccaacatttactctcatcacaatcaacaaagctcctccacctccactagacacccttcaatcgaaatggaactgatatatgaattgcgaggacacatggagcaactccaccaagagatttttgaaatacgaagatcaataaacagttgcatgaacatgcaaatgaatttacaacattccatcaaggacgaggttgcagctgcaataattcagtcaggtccagtgattgggagtaactcggataagaagggtgcaaacatagcaaattgctgtatttgttatgagcagcaagttgattctctcctttacaggtgtgggcacatgtgcacctgtttcaggtgtgcccatgaattgctttggggcaccggaaaatgtccgatatgtgaaacccctattatagatgttgtccgtgcatatatacactcatgacgtacaggttaacccggatttggtctgctgatgtctaacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="27938" stop="29824"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28238" g_stop="28577" g_length="340"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="340" r_length="340" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28578" i_stop="28664" i_length="87">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.700" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28665" g_stop="28818" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="494" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28819" i_stop="29173" i_length="355">
            <donor d_prob="0.710" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29174" g_stop="29267" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="495" r_stop="588" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29268" i_stop="29364" i_length="97">
            <donor d_prob="0.563" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29365" g_stop="29524" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="589" r_stop="748" r_length="160" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E315130" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>748</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E315130" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28238" e_stop="28577"/>
          <exon e_start="28665" e_stop="28818"/>
          <exon e_start="29174" e_stop="29267"/>
          <exon e_start="29365" e_stop="29524"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTGATATCACATATAGAAACACGAGCAGCCGGGGTTGATGATGATGAGGAAGAAGCGTACTCAGGTTATGAGGATGACTTTGAAGATGATAATAATCCAATTAGACAACAATACCTTAAACCTGAGGAATTAGTTGATCAGAACAAAGCTTCACACACTTTACAGTCGTGGAGAAATAATCAGGACACTTTACCATCATGGAGTAATGATCAAGACAGGGGTGTCAGTGACGACTCCTATCACCGTCCCTCTAATTCTTTACCACAGCCTGAATTATCCAACATTTACTCTCATCACAATCAACAAAGCTCCTCCACCTCCACTAGACACCCTTCAATCGTAAGTTTTCTCTTTTTTCTTTTACTTGCAATGACTTGCCAGATATTCCTGAGTTTGAGACTAGTCATAACGACATGGCATTAACAGGAAATGGAACTGATATATGAATTGCGAGGACACATGGAGCAACTCCACCAAGAGATTTTTGAAATACGAAGATCAATAAACAGTTGCATGAACATGCAAATGAATTTACAACATTCCATCAAGGACGAGGTTGCAGCTGCAATAATTCAGTCAGGTGTGTTGGTTGACTGAAATCTGAATATAAGATACTTACCATCATCTATCATAAAACTATGATTTTTCTGTGCGTCTTTTCCAACTTCATAAAACCCTTTGTAACCTGAAAGAAAAACTTGATAGGTGAAATACCCAAAGGTGAAGTCGTTTCACTTCTTATATTATTTGCCTTATTGAATACTTTTCCTCGGGGGATAAGCTTACCTTATTGAACTATGTGTTGAACCTCACAATCTTACAAGTTCCAAGATTGGGCTTCACTTATGAGCTTCATCTACATGTGATCTTTTTTTTTTCCGTCTATTTCAATTTCGTTTCTTTAGAGAGAGTGTGAACGGAATTTTGTAATGCAGGTCCAGTGATTGGGAGTAACTCGGATAAGAAGGGTGCAAACATAGCAAATTGCTGTATTTGTTATGAGCAGCAAGTTGATTCTCTCCTTTACAGGTACTTGGCATTGATTGTAGCAAGAAGTTTTCACTTGGGCAACTTAAAAGTTCGTTCGTTAGAAATAAGTTTGGGAACATTTGTCCTTAATTTTCAGGTGTGGGCACATGTGCACCTGTTTCAGGTGTGCCCATGAATTGCTTTGGGGCACCGGAAAATGTCCGATATGTGAAACCCCTATTATAGATGTTGTCCGTGCATATATACACTCATGACGTACAGGTTAACCGGATTTTGTTCTGCTGATGTCTAACTTT</genome_strand>
        <mrna_strand>AGAGATATCACATATAGAAACACGAGCAGCCGGGGTTGATGATGATGAGGAAGAAGCGTACTCAGGTTATGAGGATGACTTTGAAGATGATAATAATCCAATTAGACAACAATACCTTAAACCTGAGGAATTAGTTGATCAGAACAAAGCTTCACACACTTTACAGTCGTGGAGAAATAATCAGGACACTTTACCATCATGGAGTAATGATCAAGACAGGGGTGTCAGTGACGACTCCTATCACCGTCCCTCTAATTCTTTACCACAGCCTGAATTATCCAACATTTACTCTCATCACAATCAACAAAGCTCCTCCACCTCCACTAGACACCCTTCAATC.......................................................................................GAAATGGAACTGATATATGAATTGCGAGGACACATGGAGCAACTCCACCAAGAGATTTTTGAAATACGAAGATCAATAAACAGTTGCATGAACATGCAAATGAATTTACAACATTCCATCAAGGACGAGGTTGCAGCTGCAATAATTCAGTCAG...................................................................................................................................................................................................................................................................................................................................................................GTCCAGTGATTGGGAGTAACTCGGATAAGAAGGGTGCAAACATAGCAAATTGCTGTATTTGTTATGAGCAGCAAGTTGATTCTCTCCTTTACAG.................................................................................................GTGTGGGCACATGTGCACCTGTTTCAGGTGTGCCCATGAATTGCTTTGGGGCACCGGAAAATGTCCGATATGTGAAACCCCTATTATAGATGTTGTCCGTGCATATATACACTCATGACGTACAGGTTAACCCGGATTTGGTCTGCTGATGTCTAACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E541287" ref_strand="+" ref_description="SGN-E541287 [TUS-62-A2](-)">
      <seq>gtgattgggagtaactcggataagaagggtgcaaacatagcaaattgctgtatttgttatgagcagcaagttgattctctcctttacaggtgtgggcacatgtgcacctgtttcaggtgtgcccatgaattgctttggggcaccggaaaatgtccgatatgtgaaacccctattatagatgttgtccgtgcatatatacactcatgacgtacaggttaaccggattttgttctgctgatgtctaactttttgcccaatgagagatgagccgaaagatgatttttcgttttcttttccttctttttttggttttaattgaatctcgtgagccatggaactgttttatggctaatttatttgtctataacaggtttagatttagtggatgaatgctcactctcccctggttttcactaaccatcttttgtatacaataggagaaaagaaagcaaagttctttctatgacattagaaattgtatattttcaagctctttgtaacagcaattcaaatgaaaattggaagagttccttacatgtaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="28879" stop="46759"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29179" g_stop="29267" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29268" i_stop="29364" i_length="97">
            <donor d_prob="0.563" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29365" g_stop="29812" g_length="448"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="537" r_length="448" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29813" i_stop="30112" i_length="300">
            <donor d_prob="0.383" d_score="1.00"/>
            <acceptor a_prob="0.501" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30113" g_stop="30130" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="538" r_stop="554" r_length="17" r_score="0.667"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E541287" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E541287" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29179" e_stop="29267"/>
          <exon e_start="29365" e_stop="29812"/>
          <exon e_start="30113" e_stop="30130"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGATTGGGAGTAACTCGGATAAGAAGGGTGCAAACATAGCAAATTGCTGTATTTGTTATGAGCAGCAAGTTGATTCTCTCCTTTACAGGTACTTGGCATTGATTGTAGCAAGAAGTTTTCACTTGGGCAACTTAAAAGTTCGTTCGTTAGAAATAAGTTTGGGAACATTTGTCCTTAATTTTCAGGTGTGGGCACATGTGCACCTGTTTCAGGTGTGCCCATGAATTGCTTTGGGGCACCGGAAAATGTCCGATATGTGAAACCCCTATTATAGATGTTGTCCGTGCATATATACACTCATGACGTACAGGTTAACCGGATTTTGTTCTGCTGATGTCTAACTTTTTGCCCAATGAGAGATGAGCCGAAAGATGATTTTTCGTTTTCTTTTCCTTCTTTTTTTGGTTTTAATTGAATCTCGTGAGCCATGGAACTGTTTTATGGCTAATTTATTTGTCTATAACAGGTTTAGATTTAGTGGATGAATGCTCACTCTCCCCTGGTTTTCACTAACCATCTTTTGTATACAATAGGAGAAAAGAAAGCAAAGTTCTTTCTATGACATTAGAAATTGTATATTTTCAAGCTCTTTGTAACAGCAATTCAAATGAAAATTGGAAGAGTTCCTTACATGTAAAGAAGCTACAAGCAACTTAGCATTGTTTTCTTAGTTACCTAAGTAGTGAGCATTTTAATTTCTCAAAGAAAAAGAAATGGGACTACGATTTCGGTCGTCGATGCATGTTAACTCAACTACACCATCATCAGATTTGAAAAGAGTAATGTCATTTCCATTGTGACCAAATATAGAAGTTAGAAGGTTGGTTGCTAAAGCTTACAATTTTAGTCCCTTCATAGTAATTCAAACCAGCAAAAAGATATGATATCTAGCTGAGACAGATAGACGAGCAACTGAAGTGATTCATCATGTAGGCTTAAAATTCAAAAATA</genome_strand>
        <mrna_strand>GTGATTGGGAGTAACTCGGATAAGAAGGGTGCAAACATAGCAAATTGCTGTATTTGTTATGAGCAGCAAGTTGATTCTCTCCTTTACAG.................................................................................................GTGTGGGCACATGTGCACCTGTTTCAGGTGTGCCCATGAATTGCTTTGGGGCACCGGAAAATGTCCGATATGTGAAACCCCTATTATAGATGTTGTCCGTGCATATATACACTCATGACGTACAGGTTAACCGGATTTTGTTCTGCTGATGTCTAACTTTTTGCCCAATGAGAGATGAGCCGAAAGATGATTTTTCGTTTTCTTTTCCTTCTTTTTTTGGTTTTAATTGAATCTCGTGAGCCATGGAACTGTTTTATGGCTAATTTATTTGTCTATAACAGGTTTAGATTTAGTGGATGAATGCTCACTCTCCCCTGGTTTTCACTAACCATCTTTTGTATACAATAGGAGAAAAGAAAGCAAAGTTCTTTCTATGACATTAGAAATTGTATATTTTCAAGCTCTTTGTAACAGCAATTCAAATGAAAATTGGAAGAGTTCCTTACAT............................................................................................................................................................................................................................................................................................................G-TAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E541290" ref_strand="+" ref_description="SGN-E541290 [TUS-62-A2]">
      <seq>gtgattgggagtaactcggataagaagggtgcaaacatagcaaattgctgtatttgttatgagcagcaagttgattctctcctttacaggtgtgggcacatgtgcacctgtttcaggtgtgcccatgaattgctttggggcaccggaaaatgtccgatatgtgaaacccctattatagatgttgtccgtgcatatatacactcatgacgtacaggttaaccggattttgttctgctgatgtctaactttttgcccaatgagagatgagccgaaagatgatttttcgttttcttttccttctttttttggttttaattgaatctcgtgagccatggaactgttttatggctaatttatttgtctataacaggtttagatttagtggatgaatgctcactctcccctggttttcactaaccatcttttgtatacaataggagaaaagaaagcaaagttctttctatgacattagaaattgtatattttcaagctctttgtaacagcaattcaaatgaaaattggaagagttccttacatgttaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="28879" stop="30120"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29179" g_stop="29267" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29268" i_stop="29364" i_length="97">
            <donor d_prob="0.563" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29365" g_stop="29812" g_length="448"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="537" r_length="448" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29813" i_stop="30112" i_length="300">
            <donor d_prob="0.383" d_score="1.00"/>
            <acceptor a_prob="0.501" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30113" g_stop="30120" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="538" r_stop="544" r_length="7" r_score="0.875"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E541290" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>545</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E541290" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29179" e_stop="29267"/>
          <exon e_start="29365" e_stop="29812"/>
          <exon e_start="30113" e_stop="30120"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGATTGGGAGTAACTCGGATAAGAAGGGTGCAAACATAGCAAATTGCTGTATTTGTTATGAGCAGCAAGTTGATTCTCTCCTTTACAGGTACTTGGCATTGATTGTAGCAAGAAGTTTTCACTTGGGCAACTTAAAAGTTCGTTCGTTAGAAATAAGTTTGGGAACATTTGTCCTTAATTTTCAGGTGTGGGCACATGTGCACCTGTTTCAGGTGTGCCCATGAATTGCTTTGGGGCACCGGAAAATGTCCGATATGTGAAACCCCTATTATAGATGTTGTCCGTGCATATATACACTCATGACGTACAGGTTAACCGGATTTTGTTCTGCTGATGTCTAACTTTTTGCCCAATGAGAGATGAGCCGAAAGATGATTTTTCGTTTTCTTTTCCTTCTTTTTTTGGTTTTAATTGAATCTCGTGAGCCATGGAACTGTTTTATGGCTAATTTATTTGTCTATAACAGGTTTAGATTTAGTGGATGAATGCTCACTCTCCCCTGGTTTTCACTAACCATCTTTTGTATACAATAGGAGAAAAGAAAGCAAAGTTCTTTCTATGACATTAGAAATTGTATATTTTCAAGCTCTTTGTAACAGCAATTCAAATGAAAATTGGAAGAGTTCCTTACATGTAAAGAAGCTACAAGCAACTTAGCATTGTTTTCTTAGTTACCTAAGTAGTGAGCATTTTAATTTCTCAAAGAAAAAGAAATGGGACTACGATTTCGGTCGTCGATGCATGTTAACTCAACTACACCATCATCAGATTTGAAAAGAGTAATGTCATTTCCATTGTGACCAAATATAGAAGTTAGAAGGTTGGTTGCTAAAGCTTACAATTTTAGTCCCTTCATAGTAATTCAAACCAGCAAAAAGATATGATATCTAGCTGAGACAGATAGACGAGCAACTGAAGTGATTCATCATGTAGGCTTAAAA</genome_strand>
        <mrna_strand>GTGATTGGGAGTAACTCGGATAAGAAGGGTGCAAACATAGCAAATTGCTGTATTTGTTATGAGCAGCAAGTTGATTCTCTCCTTTACAG.................................................................................................GTGTGGGCACATGTGCACCTGTTTCAGGTGTGCCCATGAATTGCTTTGGGGCACCGGAAAATGTCCGATATGTGAAACCCCTATTATAGATGTTGTCCGTGCATATATACACTCATGACGTACAGGTTAACCGGATTTTGTTCTGCTGATGTCTAACTTTTTGCCCAATGAGAGATGAGCCGAAAGATGATTTTTCGTTTTCTTTTCCTTCTTTTTTTGGTTTTAATTGAATCTCGTGAGCCATGGAACTGTTTTATGGCTAATTTATTTGTCTATAACAGGTTTAGATTTAGTGGATGAATGCTCACTCTCCCCTGGTTTTCACTAACCATCTTTTGTATACAATAGGAGAAAAGAAAGCAAAGTTCTTTCTATGACATTAGAAATTGTATATTTTCAAGCTCTTTGTAACAGCAATTCAAATGAAAATTGGAAGAGTTCCTTACAT............................................................................................................................................................................................................................................................................................................G-TTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E295737" ref_strand="+" ref_description="SGN-E295737 [cLET-25-G11]">
      <seq>tgattgggagtaactcggataagaagggtgcaaacatagcaaattgctgtatttgttatgagcagcaagttgattctctcctttacaggtgtgggcacatgtgcacctgtttcaggtgtgcccatgaattgctttggggcaccggaaaatgtccgatatgtgaaacccctattatagatgttgtccgtgcatatatacactcatgacgtacaggttaaccggattttgttctgctgatgtctaactttttgcccaatgagagatgagccgaaagatgatttttcgttttcttttccttctttttttggttttaattgaatctcgtgagccatggaactgttttatggctaatttatttgtctataacaggtttagatttagtggatgaatgctcactctcccctggttttcactaaccatcttttgtatacaataggagaaaagaaagcaaagttctttctatgacattagaaattgtatattttcaagctctttgtaacagcaattcaaatgaaaattggaagagttccttacatgtaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="28880" stop="46759"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29180" g_stop="29267" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29268" i_stop="29364" i_length="97">
            <donor d_prob="0.563" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29365" g_stop="29812" g_length="448"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="536" r_length="448" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29813" i_stop="30112" i_length="300">
            <donor d_prob="0.383" d_score="1.00"/>
            <acceptor a_prob="0.501" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30113" g_stop="30130" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="537" r_stop="553" r_length="17" r_score="0.667"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E295737" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E295737" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29180" e_stop="29267"/>
          <exon e_start="29365" e_stop="29812"/>
          <exon e_start="30113" e_stop="30130"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTGGGAGTAACTCGGATAAGAAGGGTGCAAACATAGCAAATTGCTGTATTTGTTATGAGCAGCAAGTTGATTCTCTCCTTTACAGGTACTTGGCATTGATTGTAGCAAGAAGTTTTCACTTGGGCAACTTAAAAGTTCGTTCGTTAGAAATAAGTTTGGGAACATTTGTCCTTAATTTTCAGGTGTGGGCACATGTGCACCTGTTTCAGGTGTGCCCATGAATTGCTTTGGGGCACCGGAAAATGTCCGATATGTGAAACCCCTATTATAGATGTTGTCCGTGCATATATACACTCATGACGTACAGGTTAACCGGATTTTGTTCTGCTGATGTCTAACTTTTTGCCCAATGAGAGATGAGCCGAAAGATGATTTTTCGTTTTCTTTTCCTTCTTTTTTTGGTTTTAATTGAATCTCGTGAGCCATGGAACTGTTTTATGGCTAATTTATTTGTCTATAACAGGTTTAGATTTAGTGGATGAATGCTCACTCTCCCCTGGTTTTCACTAACCATCTTTTGTATACAATAGGAGAAAAGAAAGCAAAGTTCTTTCTATGACATTAGAAATTGTATATTTTCAAGCTCTTTGTAACAGCAATTCAAATGAAAATTGGAAGAGTTCCTTACATGTAAAGAAGCTACAAGCAACTTAGCATTGTTTTCTTAGTTACCTAAGTAGTGAGCATTTTAATTTCTCAAAGAAAAAGAAATGGGACTACGATTTCGGTCGTCGATGCATGTTAACTCAACTACACCATCATCAGATTTGAAAAGAGTAATGTCATTTCCATTGTGACCAAATATAGAAGTTAGAAGGTTGGTTGCTAAAGCTTACAATTTTAGTCCCTTCATAGTAATTCAAACCAGCAAAAAGATATGATATCTAGCTGAGACAGATAGACGAGCAACTGAAGTGATTCATCATGTAGGCTTAAAATTCAAAAATA</genome_strand>
        <mrna_strand>TGATTGGGAGTAACTCGGATAAGAAGGGTGCAAACATAGCAAATTGCTGTATTTGTTATGAGCAGCAAGTTGATTCTCTCCTTTACAG.................................................................................................GTGTGGGCACATGTGCACCTGTTTCAGGTGTGCCCATGAATTGCTTTGGGGCACCGGAAAATGTCCGATATGTGAAACCCCTATTATAGATGTTGTCCGTGCATATATACACTCATGACGTACAGGTTAACCGGATTTTGTTCTGCTGATGTCTAACTTTTTGCCCAATGAGAGATGAGCCGAAAGATGATTTTTCGTTTTCTTTTCCTTCTTTTTTTGGTTTTAATTGAATCTCGTGAGCCATGGAACTGTTTTATGGCTAATTTATTTGTCTATAACAGGTTTAGATTTAGTGGATGAATGCTCACTCTCCCCTGGTTTTCACTAACCATCTTTTGTATACAATAGGAGAAAAGAAAGCAAAGTTCTTTCTATGACATTAGAAATTGTATATTTTCAAGCTCTTTGTAACAGCAATTCAAATGAAAATTGGAAGAGTTCCTTACAT............................................................................................................................................................................................................................................................................................................G-TAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E377962" ref_strand="-" ref_description="SGN-E377962 [TUS-20-D22]">
      <seq>gttgatcctgttatgaccaaatgcaaacactacttctgtgagcactgtgcattaaagccccatgcaaagaataagaagtgctatgtatgcaaccaaccaacccttgggatattcaatacagcatttgaaatacgcaagaggatggcggctcaagggaaatgatggattttttgccagttctctctttcacgatgccataaaagtggatcttgctttactgttgaatgatgattatgattcaagtaacaggttgtgattgatgtatgataaggaagtttgaaacaataccaacgctggtggaaaatgaagattaggacattgacttgaacgtccaatatcacttcatgtgaaaagtcgatatatatttttttatgtaagtacggcaacttatatggaattaggttatgtgtctttcctttgctttgttgccttagtcatgtatttttgaattttaagcctacatgatgaatcacttcagttgctcgtctatctgtttcagctaaatatcatatctttttgctggtttgaattactatgaagggactaaaattgtaagctttagcaacccaccttctaacttctatatttggtcccaatggaaatgacattactcttttccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaactcgagactagttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="32770" stop="29649"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32470" g_stop="32414" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32413" i_stop="31935" i_length="479">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31934" g_stop="31773" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="219" r_length="162" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31772" i_stop="30351" i_length="1422">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30350" g_stop="29950" g_length="401"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="620" r_length="401" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="623" polyA_stop="658"/>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E377962" ref_strand="-">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>620</cumulative_length_of_scored_exons>
        <coverage percentage="0.921" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E377962" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="32470" e_stop="32414"/>
          <exon e_start="31934" e_stop="31773"/>
          <exon e_start="30350" e_stop="29950"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGATCCTGTTATGACCAAATGCAAACACTACTTCTGTGAGCACTGTGCATTAAAGGTAATTTCAGTTTCCTTTTACTCTTTTTGCTTGATCATATCACGGGGTCTGCGAACAAAGTCCACTTTTCTATGTCTTCTCCATTTCTCTTTTTAAAAAATATTTTTCCTTATTTGAGATGACATAGTTTATTCCCCCACCTTCTCCAAATCTCAACCACCTAAATAAGGAATGGCAACAGAGTGAAAGAGAGATGGTTGTAAAAGACTTTCTTGGTGTCTTTTTCTGTTGTCACTCATTTATAATGAAATCACCCGTTGAAATAGGCAAGAGTTTCAAGTATTTCAATTTACCCTTTTCCTCAAGTAAAAGCTGCCTCTTCTATTGGTTTGGACTTTTGTCAACCAATATAGACTATTGAAAACAGTTTGAGCTACTGTCACCTAGGGCACAGAGCTATGACTTATTTAACTTCTATTTATACTTTGCATGTGGATTTCAAGAATCTCTTTTTTCTTTTTGGTGGTTGTGGTTAACAGCACCATGCAAAGAATAAGAAGTGCTATGTATGCAACCAACCAACCCTTGGGATATTCAATACAGCATTTGAAATACGCAAGAGGATGGCGGCTCAAGGGAAATGATGGATTTTCTGCCAGTTCTCTCTTTCACGATGCCATAGAAGTGGATCTTGCTTTACTGTAAGTGTCTACAAATTGGATACGTTAGATTTAAAATGTGCACTTCCTTTATATGTAAAGTATAATACCATTTGTTTTCTTGCTAGAGCTCTCGCACAACTGATTCTCGACCTGCTATACTCCACCTACATACTTGAACAGTTGGTTTTGATACGTAGGTACATGTTAGCCTTGTAGAAATAGGAATACCTACATGTTTAGAACAATGCCTAATGTAAAAAATAAAGTTATTGGATTAGATTTAAAATGTGCATTTCCTTTATATGTAAAGTATAATACCATCTGTTTTCTTGCTAGAACTCTCGCACAACTGATTCTTGACCTGCTATACTCCACCTACATACTTGAACATTTGGTTTTGACCTTGTAGAAATAGGAATACCTACATGTTAACCTTGTAGAAATAGGAATACCTACATGTTTAGAACAATGTTTTGTCAAAAAAAATAAAGTTTATTTAGAAGAATACTTCCTTATAGATTGGAATTAGGGCTGCTCAAAATCAAACCTAGACAGACTTTTTCCGTACCTAAACCAACAAAAATTGGAAATATCGGTTCTTCATTCAGTTTTTCTTTTAAATTGTTGGGTTACATGGTTCAGTACTTGGTTCTTATCAATATTCAGTTTAAACCAAATACCTAACTAATATTATTTTAATTTAAAATACTATTATACATTTTATTTTATACAAAATTTGTACTTAACTTTGGTTTTTCTTTCACTTTCAACTTTCAATTCATGATCAACAGAGTAAAGAAATCCTTAGCCCTAGTTTCTCTGCTGTTGCCCTCTGCCAACTTCAAGACTCTGCTCTCTGATATGATATGATCCTCCAATGCTGAGAGTTCCACTTTTTGTTGCTACTTTCCAGCGTCATCAGCAGCAAGCCAAAGAATTTTTCACTATTTCCTTTCAGTGAATGGGTTAACTTGTTTGTCTTCGGTTTCATAATGTAACCTTTTTTCATTGCTTTATCAAGCTGTCCAAGTTTTTGCTAAAGTTGGGTGATTGTTAACACATGCAAGGAGAACAAGCTCCTTGTGATAGGGTACTGGAAATTTTGAGCCTTTGAACTTATGCAGTTCGCAAGTTAGCCTTCGTTCATCACTTTTAAGTTTGTAATTCTACTAATGACATGGTTATCACTCCAAAATCTCACACTTTAGAATCCTAACTTCTATCCCTGAAGCTTCAAAGGCCAGCAGGAATGTTAATATGTAGGTGAACTCTATGTTGTTCAGACTCTTCAAAAGTGTCATCGGGTGCGTATCGGATCCTTCGAAAGTAGTGCATTTTTGGAGGATCTGACACGGGTGATATATAATATGTGACACGTGCCCCACTTCCCAAAGATAAACATAAATTATATAATTAGGGGATGCAATCAAGAGTACCTGAATTGGTTTCTTTATTTGGCAGGTTGAATGATGATTATGATTCAAGTAACAGGTTGTGATTGATGTATGATAAGGAAGTTTGAAACAATACCAACGCTGGTGGAAGATGAAGATTAGGACATTGACTTGAACGTCCAATATCACTTCATGTGAAGAGTCGATATATATTTTCTTATGTAAGTACGGCAACTTATATGGAATTAGGTTATGTGTCTTTCCTTTGCTTTGTTGCCTTAGTCATGTATTTTTGAATTTTAAGCCTACATGATGAATCACTTCAGTTGCTCGTCTATCTGTCTCAGCTAGATATCATATCTTTTTGCTGGTTTGAATTACTATGAAGGGACTAAAATTGTAAGCTTTAGCAACCAACCTTCTAACTTCTATATTTGGTCACAATGGAAATGACATTACTCTTTTCAA</genome_strand>
        <mrna_strand>GTTGATCCTGTTATGACCAAATGCAAACACTACTTCTGTGAGCACTGTGCATTAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCATGCAAAGAATAAGAAGTGCTATGTATGCAACCAACCAACCCTTGGGATATTCAATACAGCATTTGAAATACGCAAGAGGATGGCGGCTCAAGGGAAATGATGGATTTTTTGCCAGTTCTCTCTTTCACGATGCCATAAAAGTGGATCTTGCTTTACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAATGATGATTATGATTCAAGTAACAGGTTGTGATTGATGTATGATAAGGAAGTTTGAAACAATACCAACGCTGGTGGAAAATGAAGATTAGGACATTGACTTGAACGTCCAATATCACTTCATGTGAAAAGTCGATATATATTTTTTTATGTAAGTACGGCAACTTATATGGAATTAGGTTATGTGTCTTTCCTTTGCTTTGTTGCCTTAGTCATGTATTTTTGAATTTTAAGCCTACATGATGAATCACTTCAGTTGCTCGTCTATCTGTTTCAGCTAAATATCATATCTTTTTGCTGGTTTGAATTACTATGAAGGGACTAAAATTGTAAGCTTTAGCAACCCACCTTCTAACTTCTATATTTGGTCCCAATGGAAATGACATTACTCTTTTCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E542209" ref_strand="+" ref_description="SGN-E542209 [TUS-63-G11](-)">
      <seq>gaccaaatgcaaccactatttctgtgagcactgtgcattaaagcaccatgcaaagaataagaagtgttatgtatgcaaccaaccaacccttgggatattcaatacagcatttgaaatacgcaagaggatggcggctcaagggaaatgatggattttctgccagttctctctttcacgatgccatagaagtggatcttgctttactgttgaatgatgattatgattcaagtaacaggttgtgattgatgtatgataaggaagtttgaaccaataccaacgctggtggaagatgaagattaggacattgacttgaacgtccaatatcacttcatgtgaagagtcgatatatattttcttatgtaagtacggcaacttatatggaattaggttatgtgtctttcctttgctttgttgccttagccatgtatttttgaattttaagcctacatgatgaatcacttcagttgctcgtctatctgtttcagctagatatcatatctttttgctggtttgaattactatgaagggactaaaattgtaagctttagcaaccacccttctaacttctatatttggtcacaatggaaatgacattactcttttcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="32756" stop="29649"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32456" g_stop="32414" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32413" i_stop="31935" i_length="479">
            <donor d_prob="0.992" d_score="0.95"/>
            <acceptor a_prob="0.983" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31934" g_stop="31773" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="205" r_length="162" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31772" i_stop="30351" i_length="1422">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30350" g_stop="29950" g_length="401"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="606" r_length="401" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="607" polyA_stop="648"/>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E542209" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>606</cumulative_length_of_scored_exons>
        <coverage percentage="0.935" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E542209" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32456" e_stop="32414"/>
          <exon e_start="31934" e_stop="31773"/>
          <exon e_start="30350" e_stop="29950"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACCAAATGCAAACACTACTTCTGTGAGCACTGTGCATTAAAGGTAATTTCAGTTTCCTTTTACTCTTTTTGCTTGATCATATCACGGGGTCTGCGAACAAAGTCCACTTTTCTATGTCTTCTCCATTTCTCTTTTTAAAAAATATTTTTCCTTATTTGAGATGACATAGTTTATTCCCCCACCTTCTCCAAATCTCAACCACCTAAATAAGGAATGGCAACAGAGTGAAAGAGAGATGGTTGTAAAAGACTTTCTTGGTGTCTTTTTCTGTTGTCACTCATTTATAATGAAATCACCCGTTGAAATAGGCAAGAGTTTCAAGTATTTCAATTTACCCTTTTCCTCAAGTAAAAGCTGCCTCTTCTATTGGTTTGGACTTTTGTCAACCAATATAGACTATTGAAAACAGTTTGAGCTACTGTCACCTAGGGCACAGAGCTATGACTTATTTAACTTCTATTTATACTTTGCATGTGGATTTCAAGAATCTCTTTTTTCTTTTTGGTGGTTGTGGTTAACAGCACCATGCAAAGAATAAGAAGTGCTATGTATGCAACCAACCAACCCTTGGGATATTCAATACAGCATTTGAAATACGCAAGAGGATGGCGGCTCAAGGGAAATGATGGATTTTCTGCCAGTTCTCTCTTTCACGATGCCATAGAAGTGGATCTTGCTTTACTGTAAGTGTCTACAAATTGGATACGTTAGATTTAAAATGTGCACTTCCTTTATATGTAAAGTATAATACCATTTGTTTTCTTGCTAGAGCTCTCGCACAACTGATTCTCGACCTGCTATACTCCACCTACATACTTGAACAGTTGGTTTTGATACGTAGGTACATGTTAGCCTTGTAGAAATAGGAATACCTACATGTTTAGAACAATGCCTAATGTAAAAAATAAAGTTATTGGATTAGATTTAAAATGTGCATTTCCTTTATATGTAAAGTATAATACCATCTGTTTTCTTGCTAGAACTCTCGCACAACTGATTCTTGACCTGCTATACTCCACCTACATACTTGAACATTTGGTTTTGACCTTGTAGAAATAGGAATACCTACATGTTAACCTTGTAGAAATAGGAATACCTACATGTTTAGAACAATGTTTTGTCAAAAAAAATAAAGTTTATTTAGAAGAATACTTCCTTATAGATTGGAATTAGGGCTGCTCAAAATCAAACCTAGACAGACTTTTTCCGTACCTAAACCAACAAAAATTGGAAATATCGGTTCTTCATTCAGTTTTTCTTTTAAATTGTTGGGTTACATGGTTCAGTACTTGGTTCTTATCAATATTCAGTTTAAACCAAATACCTAACTAATATTATTTTAATTTAAAATACTATTATACATTTTATTTTATACAAAATTTGTACTTAACTTTGGTTTTTCTTTCACTTTCAACTTTCAATTCATGATCAACAGAGTAAAGAAATCCTTAGCCCTAGTTTCTCTGCTGTTGCCCTCTGCCAACTTCAAGACTCTGCTCTCTGATATGATATGATCCTCCAATGCTGAGAGTTCCACTTTTTGTTGCTACTTTCCAGCGTCATCAGCAGCAAGCCAAAGAATTTTTCACTATTTCCTTTCAGTGAATGGGTTAACTTGTTTGTCTTCGGTTTCATAATGTAACCTTTTTTCATTGCTTTATCAAGCTGTCCAAGTTTTTGCTAAAGTTGGGTGATTGTTAACACATGCAAGGAGAACAAGCTCCTTGTGATAGGGTACTGGAAATTTTGAGCCTTTGAACTTATGCAGTTCGCAAGTTAGCCTTCGTTCATCACTTTTAAGTTTGTAATTCTACTAATGACATGGTTATCACTCCAAAATCTCACACTTTAGAATCCTAACTTCTATCCCTGAAGCTTCAAAGGCCAGCAGGAATGTTAATATGTAGGTGAACTCTATGTTGTTCAGACTCTTCAAAAGTGTCATCGGGTGCGTATCGGATCCTTCGAAAGTAGTGCATTTTTGGAGGATCTGACACGGGTGATATATAATATGTGACACGTGCCCCACTTCCCAAAGATAAACATAAATTATATAATTAGGGGATGCAATCAAGAGTACCTGAATTGGTTTCTTTATTTGGCAGGTTGAATGATGATTATGATTCAAGTAACAGGTTGTGATTGATGTATGATAAGGAAGTTTGAAACAATACCAACGCTGGTGGAAGATGAAGATTAGGACATTGACTTGAACGTCCAATATCACTTCATGTGAAGAGTCGATATATATTTTCTTATGTAAGTACGGCAACTTATATGGAATTAGGTTATGTGTCTTTCCTTTGCTTTGTTGCCTTAGTCATGTATTTTTGAATTTTAAGCCTACATGATGAATCACTTCAGTTGCTCGTCTATCTGTCTCAGCTAGATATCATATCTTTTTGCTGGTTTGAATTACTATGAAGGGACTAAAATTGTAAGCTTTAGCAACCAACCTTCTAACTTCTATATTTGGTCACAATGGAAATGACATTACTCTTTTCAA</genome_strand>
        <mrna_strand>GACCAAATGCAACCACTATTTCTGTGAGCACTGTGCATTAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCATGCAAAGAATAAGAAGTGTTATGTATGCAACCAACCAACCCTTGGGATATTCAATACAGCATTTGAAATACGCAAGAGGATGGCGGCTCAAGGGAAATGATGGATTTTCTGCCAGTTCTCTCTTTCACGATGCCATAGAAGTGGATCTTGCTTTACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAATGATGATTATGATTCAAGTAACAGGTTGTGATTGATGTATGATAAGGAAGTTTGAACCAATACCAACGCTGGTGGAAGATGAAGATTAGGACATTGACTTGAACGTCCAATATCACTTCATGTGAAGAGTCGATATATATTTTCTTATGTAAGTACGGCAACTTATATGGAATTAGGTTATGTGTCTTTCCTTTGCTTTGTTGCCTTAGCCATGTATTTTTGAATTTTAAGCCTACATGATGAATCACTTCAGTTGCTCGTCTATCTGTTTCAGCTAGATATCATATCTTTTTGCTGGTTTGAATTACTATGAAGGGACTAAAATTGTAAGCTTTAGCAACCACCCTTCTAACTTCTATATTTGGTCACAATGGAAATGACATTACTCTTTTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E233157" ref_strand="-" ref_description="SGN-E233157 [cLED-6-I22]">
      <seq>gcaaccaaccaacccttgggatattcaatacagcatttgaaatacgcaagaggatggcggctcaagggaaatgatggattttctgccagttctctctttcacgatgccatagaagtggatcttgctttactgttgaatgatgattatgattcaagtaacaggttgtgattgatgtatgataaggaagtttgaaacaataccaacgctggtggaagatgaagattaggacattgacttgaacgtccaatatcacttcatgtgaagagtcgatatatattttcttatgtaagggcggcaacttatatggaattaggttatgtgtctttcctttgctttgttgccttagtcatgtatttttgaattttaagcctacatgatgaatcacttcagttgctcgtctatctgtctcagctagatatcatatctttttgctggtttgaattactatgaagggactaaaattgtaagctttagcaaccaaccttctaacttctaaatttggtcccaatggaaatgacattactcttttcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaactcgagactagttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="32203" stop="29649"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31903" g_stop="31773" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="131" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31772" i_stop="30351" i_length="1422">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30350" g_stop="29950" g_length="401"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="532" r_length="401" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="535" polyA_stop="570"/>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E233157" ref_strand="-">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="0.909" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E233157" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="31903" e_stop="31773"/>
          <exon e_start="30350" e_stop="29950"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAACCAACCAACCCTTGGGATATTCAATACAGCATTTGAAATACGCAAGAGGATGGCGGCTCAAGGGAAATGATGGATTTTCTGCCAGTTCTCTCTTTCACGATGCCATAGAAGTGGATCTTGCTTTACTGTAAGTGTCTACAAATTGGATACGTTAGATTTAAAATGTGCACTTCCTTTATATGTAAAGTATAATACCATTTGTTTTCTTGCTAGAGCTCTCGCACAACTGATTCTCGACCTGCTATACTCCACCTACATACTTGAACAGTTGGTTTTGATACGTAGGTACATGTTAGCCTTGTAGAAATAGGAATACCTACATGTTTAGAACAATGCCTAATGTAAAAAATAAAGTTATTGGATTAGATTTAAAATGTGCATTTCCTTTATATGTAAAGTATAATACCATCTGTTTTCTTGCTAGAACTCTCGCACAACTGATTCTTGACCTGCTATACTCCACCTACATACTTGAACATTTGGTTTTGACCTTGTAGAAATAGGAATACCTACATGTTAACCTTGTAGAAATAGGAATACCTACATGTTTAGAACAATGTTTTGTCAAAAAAAATAAAGTTTATTTAGAAGAATACTTCCTTATAGATTGGAATTAGGGCTGCTCAAAATCAAACCTAGACAGACTTTTTCCGTACCTAAACCAACAAAAATTGGAAATATCGGTTCTTCATTCAGTTTTTCTTTTAAATTGTTGGGTTACATGGTTCAGTACTTGGTTCTTATCAATATTCAGTTTAAACCAAATACCTAACTAATATTATTTTAATTTAAAATACTATTATACATTTTATTTTATACAAAATTTGTACTTAACTTTGGTTTTTCTTTCACTTTCAACTTTCAATTCATGATCAACAGAGTAAAGAAATCCTTAGCCCTAGTTTCTCTGCTGTTGCCCTCTGCCAACTTCAAGACTCTGCTCTCTGATATGATATGATCCTCCAATGCTGAGAGTTCCACTTTTTGTTGCTACTTTCCAGCGTCATCAGCAGCAAGCCAAAGAATTTTTCACTATTTCCTTTCAGTGAATGGGTTAACTTGTTTGTCTTCGGTTTCATAATGTAACCTTTTTTCATTGCTTTATCAAGCTGTCCAAGTTTTTGCTAAAGTTGGGTGATTGTTAACACATGCAAGGAGAACAAGCTCCTTGTGATAGGGTACTGGAAATTTTGAGCCTTTGAACTTATGCAGTTCGCAAGTTAGCCTTCGTTCATCACTTTTAAGTTTGTAATTCTACTAATGACATGGTTATCACTCCAAAATCTCACACTTTAGAATCCTAACTTCTATCCCTGAAGCTTCAAAGGCCAGCAGGAATGTTAATATGTAGGTGAACTCTATGTTGTTCAGACTCTTCAAAAGTGTCATCGGGTGCGTATCGGATCCTTCGAAAGTAGTGCATTTTTGGAGGATCTGACACGGGTGATATATAATATGTGACACGTGCCCCACTTCCCAAAGATAAACATAAATTATATAATTAGGGGATGCAATCAAGAGTACCTGAATTGGTTTCTTTATTTGGCAGGTTGAATGATGATTATGATTCAAGTAACAGGTTGTGATTGATGTATGATAAGGAAGTTTGAAACAATACCAACGCTGGTGGAAGATGAAGATTAGGACATTGACTTGAACGTCCAATATCACTTCATGTGAAGAGTCGATATATATTTTCTTATGTAAGTACGGCAACTTATATGGAATTAGGTTATGTGTCTTTCCTTTGCTTTGTTGCCTTAGTCATGTATTTTTGAATTTTAAGCCTACATGATGAATCACTTCAGTTGCTCGTCTATCTGTCTCAGCTAGATATCATATCTTTTTGCTGGTTTGAATTACTATGAAGGGACTAAAATTGTAAGCTTTAGCAACCAACCTTCTAACTTCTATATTTGGTCACAATGGAAATGACATTACTCTTTTCAA</genome_strand>
        <mrna_strand>GCAACCAACCAACCCTTGGGATATTCAATACAGCATTTGAAATACGCAAGAGGATGGCGGCTCAAGGGAAATGATGGATTTTCTGCCAGTTCTCTCTTTCACGATGCCATAGAAGTGGATCTTGCTTTACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAATGATGATTATGATTCAAGTAACAGGTTGTGATTGATGTATGATAAGGAAGTTTGAAACAATACCAACGCTGGTGGAAGATGAAGATTAGGACATTGACTTGAACGTCCAATATCACTTCATGTGAAGAGTCGATATATATTTTCTTATGTAAGGGCGGCAACTTATATGGAATTAGGTTATGTGTCTTTCCTTTGCTTTGTTGCCTTAGTCATGTATTTTTGAATTTTAAGCCTACATGATGAATCACTTCAGTTGCTCGTCTATCTGTCTCAGCTAGATATCATATCTTTTTGCTGGTTTGAATTACTATGAAGGGACTAAAATTGTAAGCTTTAGCAACCAACCTTCTAACTTCTAAATTTGGTCCCAATGGAAATGACATTACTCTTTTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E237845" ref_strand="-" ref_description="SGN-E237845 [cLED-18-L15]">
      <seq>atggcggctcaagggaaatgatggattttctgccagttctctctttcacgatgccataaaagtggatcttgctttactgttgaatgatgattatgattcaagtaacaggttgtgattgatgtatgataaggaagtttgaaacaataccaacgctggtggaagatgaagattaggacattgacttgaacgtccaatatcacttcatgtgaagagtcgaaatatattttcttatgtaagtacggcaacttatatggaattaggttatgtgtctttcctttgctttgttgccttagtcatgtatttttgaattttaagcctacatgatgaatcacttcagttgctcgtctatctgtctcagctagatatcatatctttttgctggtttgaattactatgaagggactaaaattgtaagctttagcaaccaaccttctaacttctatatttggtcccaatggaaatgacattactcttttccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaactcgagactagttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="32150" stop="29649"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31850" g_stop="31773" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31772" i_stop="30351" i_length="1422">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30350" g_stop="29950" g_length="401"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="479" r_length="401" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="482" polyA_stop="517"/>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E237845" ref_strand="-">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="0.900" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E237845" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="31850" e_stop="31773"/>
          <exon e_start="30350" e_stop="29950"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGCGGCTCAAGGGAAATGATGGATTTTCTGCCAGTTCTCTCTTTCACGATGCCATAGAAGTGGATCTTGCTTTACTGTAAGTGTCTACAAATTGGATACGTTAGATTTAAAATGTGCACTTCCTTTATATGTAAAGTATAATACCATTTGTTTTCTTGCTAGAGCTCTCGCACAACTGATTCTCGACCTGCTATACTCCACCTACATACTTGAACAGTTGGTTTTGATACGTAGGTACATGTTAGCCTTGTAGAAATAGGAATACCTACATGTTTAGAACAATGCCTAATGTAAAAAATAAAGTTATTGGATTAGATTTAAAATGTGCATTTCCTTTATATGTAAAGTATAATACCATCTGTTTTCTTGCTAGAACTCTCGCACAACTGATTCTTGACCTGCTATACTCCACCTACATACTTGAACATTTGGTTTTGACCTTGTAGAAATAGGAATACCTACATGTTAACCTTGTAGAAATAGGAATACCTACATGTTTAGAACAATGTTTTGTCAAAAAAAATAAAGTTTATTTAGAAGAATACTTCCTTATAGATTGGAATTAGGGCTGCTCAAAATCAAACCTAGACAGACTTTTTCCGTACCTAAACCAACAAAAATTGGAAATATCGGTTCTTCATTCAGTTTTTCTTTTAAATTGTTGGGTTACATGGTTCAGTACTTGGTTCTTATCAATATTCAGTTTAAACCAAATACCTAACTAATATTATTTTAATTTAAAATACTATTATACATTTTATTTTATACAAAATTTGTACTTAACTTTGGTTTTTCTTTCACTTTCAACTTTCAATTCATGATCAACAGAGTAAAGAAATCCTTAGCCCTAGTTTCTCTGCTGTTGCCCTCTGCCAACTTCAAGACTCTGCTCTCTGATATGATATGATCCTCCAATGCTGAGAGTTCCACTTTTTGTTGCTACTTTCCAGCGTCATCAGCAGCAAGCCAAAGAATTTTTCACTATTTCCTTTCAGTGAATGGGTTAACTTGTTTGTCTTCGGTTTCATAATGTAACCTTTTTTCATTGCTTTATCAAGCTGTCCAAGTTTTTGCTAAAGTTGGGTGATTGTTAACACATGCAAGGAGAACAAGCTCCTTGTGATAGGGTACTGGAAATTTTGAGCCTTTGAACTTATGCAGTTCGCAAGTTAGCCTTCGTTCATCACTTTTAAGTTTGTAATTCTACTAATGACATGGTTATCACTCCAAAATCTCACACTTTAGAATCCTAACTTCTATCCCTGAAGCTTCAAAGGCCAGCAGGAATGTTAATATGTAGGTGAACTCTATGTTGTTCAGACTCTTCAAAAGTGTCATCGGGTGCGTATCGGATCCTTCGAAAGTAGTGCATTTTTGGAGGATCTGACACGGGTGATATATAATATGTGACACGTGCCCCACTTCCCAAAGATAAACATAAATTATATAATTAGGGGATGCAATCAAGAGTACCTGAATTGGTTTCTTTATTTGGCAGGTTGAATGATGATTATGATTCAAGTAACAGGTTGTGATTGATGTATGATAAGGAAGTTTGAAACAATACCAACGCTGGTGGAAGATGAAGATTAGGACATTGACTTGAACGTCCAATATCACTTCATGTGAAGAGTCGATATATATTTTCTTATGTAAGTACGGCAACTTATATGGAATTAGGTTATGTGTCTTTCCTTTGCTTTGTTGCCTTAGTCATGTATTTTTGAATTTTAAGCCTACATGATGAATCACTTCAGTTGCTCGTCTATCTGTCTCAGCTAGATATCATATCTTTTTGCTGGTTTGAATTACTATGAAGGGACTAAAATTGTAAGCTTTAGCAACCAACCTTCTAACTTCTATATTTGGTCACAATGGAAATGACATTACTCTTTTCAA</genome_strand>
        <mrna_strand>ATGGCGGCTCAAGGGAAATGATGGATTTTCTGCCAGTTCTCTCTTTCACGATGCCATAAAAGTGGATCTTGCTTTACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAATGATGATTATGATTCAAGTAACAGGTTGTGATTGATGTATGATAAGGAAGTTTGAAACAATACCAACGCTGGTGGAAGATGAAGATTAGGACATTGACTTGAACGTCCAATATCACTTCATGTGAAGAGTCGAAATATATTTTCTTATGTAAGTACGGCAACTTATATGGAATTAGGTTATGTGTCTTTCCTTTGCTTTGTTGCCTTAGTCATGTATTTTTGAATTTTAAGCCTACATGATGAATCACTTCAGTTGCTCGTCTATCTGTCTCAGCTAGATATCATATCTTTTTGCTGGTTTGAATTACTATGAAGGGACTAAAATTGTAAGCTTTAGCAACCAACCTTCTAACTTCTATATTTGGTCCCAATGGAAATGACATTACTCTTTTCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E377961" ref_strand="-" ref_description="SGN-E377961 [TUS-20-D22](-)">
      <seq>atctgtaaggactataaagagactggatattgtggatatggggactcctgcaaatttatgcatgaccgtggagattataagtctgggtggcagatggaaagggagtgggatgaagctgagaaagagaggaaaagaaaattggctctgggaatgctcaatgaagacgatgaggatgcagagaagagtgatgaagatgacgacgatgatgcattaccatttgcttgttttatctgcagagagccttttgttgatcctgttatgaccaaatgcaaacactacttctgtgagcactgtgcattaaagcaccatgcaaagaataagaagtgctatgtatgcaaccaaccaacccttgggatattcaatacagcatttgaaatacgcaagaggatggcggctcaagggaaatgatggattttctgccagttctctctttcacgatgccatagaagtggatcttgctttactgttgaatgatgattatgattcaagtaacaggttgtgattgatgtatgataaggaagtttgaaacaataccaacgctggtggaagatgaagattaggacattgacttgaacgtccaatatcacttcatgtgaagagtcgatatatattttcttatgtaagtacggcaacttatatggaattaggttatgtgtctttcctttgctttgttgccttagtcatgtatttttgaattttaagcctacatgatgaatcacttcagttgctcgtctatctgtctcagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="33016" stop="29769"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32716" g_stop="32414" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="303" r_length="303" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32413" i_stop="31935" i_length="479">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31934" g_stop="31773" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="465" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31772" i_stop="30351" i_length="1422">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30350" g_stop="30069" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="747" r_length="282" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E377961" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>747</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E377961" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="32716" e_stop="32414"/>
          <exon e_start="31934" e_stop="31773"/>
          <exon e_start="30350" e_stop="30069"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTGTAAGGACTATAAAGAGACTGGATATTGTGGATATGGGGACTCCTGCAAATTTATGCATGACCGTGGAGATTATAAGTCTGGGTGGCAGATGGAAAGGGAGTGGGATGAAGCTGAGAAAGAGAGGAAAAGAAAATTGGCTCTGGGAATGCTCAATGAAGACGATGAGGATGCAGAGAAGAGTGATGAAGATGACGACGATGATGCATTACCATTTGCTTGTTTTATCTGCAGAGAGCCTTTTGTTGATCCTGTTATGACCAAATGCAAACACTACTTCTGTGAGCACTGTGCATTAAAGGTAATTTCAGTTTCCTTTTACTCTTTTTGCTTGATCATATCACGGGGTCTGCGAACAAAGTCCACTTTTCTATGTCTTCTCCATTTCTCTTTTTAAAAAATATTTTTCCTTATTTGAGATGACATAGTTTATTCCCCCACCTTCTCCAAATCTCAACCACCTAAATAAGGAATGGCAACAGAGTGAAAGAGAGATGGTTGTAAAAGACTTTCTTGGTGTCTTTTTCTGTTGTCACTCATTTATAATGAAATCACCCGTTGAAATAGGCAAGAGTTTCAAGTATTTCAATTTACCCTTTTCCTCAAGTAAAAGCTGCCTCTTCTATTGGTTTGGACTTTTGTCAACCAATATAGACTATTGAAAACAGTTTGAGCTACTGTCACCTAGGGCACAGAGCTATGACTTATTTAACTTCTATTTATACTTTGCATGTGGATTTCAAGAATCTCTTTTTTCTTTTTGGTGGTTGTGGTTAACAGCACCATGCAAAGAATAAGAAGTGCTATGTATGCAACCAACCAACCCTTGGGATATTCAATACAGCATTTGAAATACGCAAGAGGATGGCGGCTCAAGGGAAATGATGGATTTTCTGCCAGTTCTCTCTTTCACGATGCCATAGAAGTGGATCTTGCTTTACTGTAAGTGTCTACAAATTGGATACGTTAGATTTAAAATGTGCACTTCCTTTATATGTAAAGTATAATACCATTTGTTTTCTTGCTAGAGCTCTCGCACAACTGATTCTCGACCTGCTATACTCCACCTACATACTTGAACAGTTGGTTTTGATACGTAGGTACATGTTAGCCTTGTAGAAATAGGAATACCTACATGTTTAGAACAATGCCTAATGTAAAAAATAAAGTTATTGGATTAGATTTAAAATGTGCATTTCCTTTATATGTAAAGTATAATACCATCTGTTTTCTTGCTAGAACTCTCGCACAACTGATTCTTGACCTGCTATACTCCACCTACATACTTGAACATTTGGTTTTGACCTTGTAGAAATAGGAATACCTACATGTTAACCTTGTAGAAATAGGAATACCTACATGTTTAGAACAATGTTTTGTCAAAAAAAATAAAGTTTATTTAGAAGAATACTTCCTTATAGATTGGAATTAGGGCTGCTCAAAATCAAACCTAGACAGACTTTTTCCGTACCTAAACCAACAAAAATTGGAAATATCGGTTCTTCATTCAGTTTTTCTTTTAAATTGTTGGGTTACATGGTTCAGTACTTGGTTCTTATCAATATTCAGTTTAAACCAAATACCTAACTAATATTATTTTAATTTAAAATACTATTATACATTTTATTTTATACAAAATTTGTACTTAACTTTGGTTTTTCTTTCACTTTCAACTTTCAATTCATGATCAACAGAGTAAAGAAATCCTTAGCCCTAGTTTCTCTGCTGTTGCCCTCTGCCAACTTCAAGACTCTGCTCTCTGATATGATATGATCCTCCAATGCTGAGAGTTCCACTTTTTGTTGCTACTTTCCAGCGTCATCAGCAGCAAGCCAAAGAATTTTTCACTATTTCCTTTCAGTGAATGGGTTAACTTGTTTGTCTTCGGTTTCATAATGTAACCTTTTTTCATTGCTTTATCAAGCTGTCCAAGTTTTTGCTAAAGTTGGGTGATTGTTAACACATGCAAGGAGAACAAGCTCCTTGTGATAGGGTACTGGAAATTTTGAGCCTTTGAACTTATGCAGTTCGCAAGTTAGCCTTCGTTCATCACTTTTAAGTTTGTAATTCTACTAATGACATGGTTATCACTCCAAAATCTCACACTTTAGAATCCTAACTTCTATCCCTGAAGCTTCAAAGGCCAGCAGGAATGTTAATATGTAGGTGAACTCTATGTTGTTCAGACTCTTCAAAAGTGTCATCGGGTGCGTATCGGATCCTTCGAAAGTAGTGCATTTTTGGAGGATCTGACACGGGTGATATATAATATGTGACACGTGCCCCACTTCCCAAAGATAAACATAAATTATATAATTAGGGGATGCAATCAAGAGTACCTGAATTGGTTTCTTTATTTGGCAGGTTGAATGATGATTATGATTCAAGTAACAGGTTGTGATTGATGTATGATAAGGAAGTTTGAAACAATACCAACGCTGGTGGAAGATGAAGATTAGGACATTGACTTGAACGTCCAATATCACTTCATGTGAAGAGTCGATATATATTTTCTTATGTAAGTACGGCAACTTATATGGAATTAGGTTATGTGTCTTTCCTTTGCTTTGTTGCCTTAGTCATGTATTTTTGAATTTTAAGCCTACATGATGAATCACTTCAGTTGCTCGTCTATCTGTCTCAGCT</genome_strand>
        <mrna_strand>ATCTGTAAGGACTATAAAGAGACTGGATATTGTGGATATGGGGACTCCTGCAAATTTATGCATGACCGTGGAGATTATAAGTCTGGGTGGCAGATGGAAAGGGAGTGGGATGAAGCTGAGAAAGAGAGGAAAAGAAAATTGGCTCTGGGAATGCTCAATGAAGACGATGAGGATGCAGAGAAGAGTGATGAAGATGACGACGATGATGCATTACCATTTGCTTGTTTTATCTGCAGAGAGCCTTTTGTTGATCCTGTTATGACCAAATGCAAACACTACTTCTGTGAGCACTGTGCATTAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCATGCAAAGAATAAGAAGTGCTATGTATGCAACCAACCAACCCTTGGGATATTCAATACAGCATTTGAAATACGCAAGAGGATGGCGGCTCAAGGGAAATGATGGATTTTCTGCCAGTTCTCTCTTTCACGATGCCATAGAAGTGGATCTTGCTTTACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAATGATGATTATGATTCAAGTAACAGGTTGTGATTGATGTATGATAAGGAAGTTTGAAACAATACCAACGCTGGTGGAAGATGAAGATTAGGACATTGACTTGAACGTCCAATATCACTTCATGTGAAGAGTCGATATATATTTTCTTATGTAAGTACGGCAACTTATATGGAATTAGGTTATGTGTCTTTCCTTTGCTTTGTTGCCTTAGTCATGTATTTTTGAATTTTAAGCCTACATGATGAATCACTTCAGTTGCTCGTCTATCTGTCTCAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E687754" ref_strand="+" ref_description="SGN-E687754 [T3_tus_79_N12]">
      <seq>ctttataacctcttgccaccggttcgccaccgcctgcggttttccgcctctcttgtcgccgtgaagtttcctgcctgcggtgtttggttgtcttcgatctcaaactctcgattataccgtctgctcttttattgtgtggcacctggaatctctaaattctgaagcctctctttgaccgactttggtgaaatactcgtctctttctcaaagtaaaatctgagttatggagaattcaaatactccagcatctgattcgaacgctgccaaagctgaagctgaacagctgccaacagctcccgtatgcaattttttcaaaaaaccatccaagggaaaaaatatcagaaagcgtcctacagttgaagagggagagaatgaagatgcagaaggagatagttcagtcatatataccaagaaaaagccagcggttgcgaataataagctgcacttctcaactggaccttcaaagtccaacaaggatactgactccaatgtagattcaaaagcggctcgttttcatttcgagtcctcaaaggaaattcaagttcataatgatagtagagcaacagctacttaagaaactgagactgagttctctagagatgctcgggccattcgagaaaaacctctgaaccatgcagaggaggctttaaagggaaaaagcaagacaggtggtgatgacaaattgtataaaggtatgaatcaatatcctgattacaaaagctggtttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="35790" stop="32521"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35493" g_stop="35359" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="134" r_length="134" r_score="0.926"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35358" i_stop="34695" i_length="664">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.824" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34694" g_stop="34606" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="223" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34605" i_stop="34488" i_length="118">
            <donor d_prob="0.921" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34487" g_stop="34412" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="299" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34411" i_stop="33250" i_length="1162">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33249" g_stop="32821" g_length="429"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="729" r_length="430" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E687754" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>729</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E687754" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35493" e_stop="35359"/>
          <exon e_start="34694" e_stop="34606"/>
          <exon e_start="34487" e_stop="34412"/>
          <exon e_start="33249" e_stop="32821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAACCCTCTTGCCACCGGTTCGCCACCGCCTGCGGCAAATCCGCCTCTCTTGTCGCCGTGAAGTTTCCTGCCTGCGGTGTTTGGTTGTCTTCGATCTCAAACTCTCGATTATACCGTCTGCTCTTTTATTGGTATGTATCTCTCACTATTTCTGTTAGCTAATCTTTCTGCATTTGATTTTGCTGGATTGAAGGAATTGCTTTGTTTGAACTATTTCGCCGGTAATGGAGTGATTTACTTGCTCTTTTCTTAAAACTGCACTGTTTTATCTTCTTCTATTTATTTGTTTCTTTTTGTTCTCCATATTTCTTTTAGGGCTTTTCGGTGTTGTTCATTGAATCTAATTGACAGAGGTTCATTTTTAGGAGTTGGAAAAGAAAAAGAAAAATCGAGGTTCAAAATATGATTGAAAGAACATTATTTGTTTGTCCTTGATAATCTTCTGTTTACCTCTCTTACTCAAAAAAATGAGAATTAGTCAATGTATTGATGTAAATGCGTCTAATTTTATTTGCAGAGTTCATAAATTGCTAAATAAGATCAAACTGGTTGTAATTTTTATGGTGAATTTCTCAATTTGTAAATGGAGATGTTTTTTATTTGTATGTCAGCAATATTATTGTAAGTTTATTTGCTTTAGGTTTTTGCCATTTTTAGCCTTTTTTAGCACGATTGATTTGTCTTTATAAGCTGAAAAGACGGATAAACTGAACCAGAGCCCAAAGTATTGGATAATTGACCATATGTATACTATATCTGGACATGTTAATGATAGCATGTTTATGTTCAAAGCAGTGTGGCACCTGGAATCTCTAAATTCTGAAGCCTCTCTTTGACCGACTTTGGTGAAATACTCGTCTCTTTCTCAAAGTAAAATCTGAGTTGTAAGTTCCCTTTTTCCTCATTTTCTGTCCATCCAGCTCCTCCATAAACTGATTCTCTTTGTCTCTGCTTATACTGAAGCCATTACTTTGTTCTCTGTCCAATGCTTTTTATTGCTAGATGGAGAATTCAAATACTCCAGCATCTGATTCGAACGCTGCCAAAGCTGAAGCTGAACAGCTGCCAACAGCTCCCGGTAAGAGACCTCCTCCTCCTTCTCAACTGGAAACAACTCTACTCAATTTATTTGTGGTTACTGGCGTCCTGTCATTTGGGATATCATCTCAAGCTGATTTAGAATATAGAGCTAATGAATAGGGAAAATTGTATATAATAGCAAACTAATAACCTAAAATAAATTGAGTAGCTAGGGTTTAATTTAATTGTGCTCCATAGCAAACGTTAGTTAAAGTTTGCCAGGCGTCTCTCTCCCAAAAATCTCGCTCGCCACTCTCCGTTCTCGCTCGCCTCTCTCACTTTATACACAAAAGTGTATAAATTCTGTTTCTGTTTTGTATAAAGCGAGAGAAAATTGTATATACACATGCAAAAATATATATCTTCGTGTTATACACTTAATTATACTATTTACAAACATTTTACTTCAAATATTGCAGAGAAAAAGGCCAACGAATTATACAATTGCGAATTATACAATTGCAGTGAAATACAATTTTCTCTAACTTTATACAACAGAAGTGTATATATTGTGTTTCTGTTTTTGTATAAAGCCAGAGAAAAACATATATCTTTCTTGCTATACACTTATAATTATGCAATATACAAACATTTTAATTCGATTCAATTGTATGCGAAGCAAATTTTATAAAAATATTGCAGCGAATTATACAATTGTGCATTATACAATCGCAGTGAAATAGGATAGCGAATTATACAATTGCAGCAAAATAAGTCAGCCAATTATACAATTTACATTGATGATAAGTCACTGTAATCTGATTCTACATCACCATTATCAGATTCTAAGAAGCTGCAGCTACCACTGTGCAGCGTATTAGAATTAAATCTTCTGAATTGTTGGTGTATAATCTGATAATGCACTGTAATTTGAGTAGCTGCTGTTACCCCCATAGTAAGTATTAACATAAACTGTTCAGAGGTTTAGTTCTAGTCCATATATGATTATCTCGACTTTGCCACTGAAGATGACTGTACGAATGTTCTCATCAATACTGTTTTTGTTAGTACCCCGGGTTTGCATATATTATTATGTATTCTACGCTAGCAAATATTAATCCTTAGTTTCTTTTCTCATCTAGCTCGCTTTTGCCTTCTTTTGTCAATTTACTGTGGCTTCTTTTGCTTAATATGTTTTTGTATACTTTCCTCTATTGCAGTATGCAATTTTTTCAAAAAACCATCCAAGGGAAAAAATATCAGAAAGCGTCCTACAGTTGAAGAGGGAGAGAATGAAGATGCAGAAGGAGATAGTTCAGTCATATATACCAAGAAAAAGCCAGCGGTTGCGAATAATAAGCTGCACTTCTCAACTGGACCTTCAAAGTCCAACAAGGATACTGACTCCAATGTAGATTCAAAAGCGGCTCGTTTTCATTTCGAGTCCTCAAAGGAAATTCAAGTTCAAAATGATAGTAGAGCAACAGCTACTTTAGAAACTGAGACTGAGTTCTCTAGAGATGCCCGGGCCATTCGAGAAAAAGCTCTGAAGCAGGCAGAGGAGGCTTTAAAGGGAAAAAGCAAGACAGGTGGTGATGACAAATTGTATAAAGGTATGAATCAATATACTGATTAC-AAAGCTGGTTTGA</genome_strand>
        <mrna_strand>CTTTATAACCTCTTGCCACCGGTTCGCCACCGCCTGCGG-TTTTCCGCCTCTCTTGTCGCCGTGAAGTTTCCTGCCTGCGGTGTTTGGTTGTCTTCGATCTCAAACTCTCGATTATACCGTCTGCTCTTTTATTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCACCTGGAATCTCTAAATTCTGAAGCCTCTCTTTGACCGACTTTGGTGAAATACTCGTCTCTTTCTCAAAGTAAAATCTGAGTT......................................................................................................................ATGGAGAATTCAAATACTCCAGCATCTGATTCGAACGCTGCCAAAGCTGAAGCTGAACAGCTGCCAACAGCTCCCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCAATTTTTTCAAAAAACCATCCAAGGGAAAAAATATCAGAAAGCGTCCTACAGTTGAAGAGGGAGAGAATGAAGATGCAGAAGGAGATAGTTCAGTCATATATACCAAGAAAAAGCCAGCGGTTGCGAATAATAAGCTGCACTTCTCAACTGGACCTTCAAAGTCCAACAAGGATACTGACTCCAATGTAGATTCAAAAGCGGCTCGTTTTCATTTCGAGTCCTCAAAGGAAATTCAAGTTCATAATGATAGTAGAGCAACAGCTACTTAAGAAACTGAGACTGAGTTCTCTAGAGATGCTCGGGCCATTCGAGAAAAACCTCTGAACCATGCAGAGGAGGCTTTAAAGGGAAAAAGCAAGACAGGTGGTGATGACAAATTGTATAAAGGTATGAATCAATATCCTGATTACAAAAGCTGGTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E542212" ref_strand="+" ref_description="SGN-E542212 [TUS-63-G11]">
      <seq>cctcgtgccgaaaaaccctcttgccaccggttcgccaccgcctgcggcaaatccgcctctcttgtcgccgtgaagtttcctgcctgcggtgtttggttgtcttcgatctcaaactctcgattataccgtctgctcttttattgcagtgtggcacctggaatctctaaattctgaagcctctctttgaccgactttggtgaaatactcgtctctttctcaaagtaaaatctgagttatggagaattcaaatactccagcatctgattcgaacgctgccaaagctgaagctgaacagctgccaacagctcccgtatgcaattttttcaaaaaaccatccaagggaaaaaatatcagaaagcgtcctacagttgaagagggagagaatgaagatgcagaacgagatagttcagtcatatataccaagaaaaagccagcggttgcgaataataagctgcacttctcaactggaccttcaaagtccaacaaggatactgactccaatgtagattcaaaagcggctcgttttcatttcgagtcctcaaaggaaattcaagttcaaaatgatagtagagcaacagctactttagaaactgagactgagttctctagagatgcccgggccattcgagaaaaagctctgaagcaggcagaggatgcttgtaagggaaaaagcaagacacgtggtgatgacaaattgtataaaggtatgaatcactatactgattacaaagctggttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="35791" stop="32523"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35498" g_stop="35359" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="5" r_stop="143" r_length="139" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35358" i_stop="34698" i_length="661">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.424" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34697" g_stop="34606" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="235" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34605" i_stop="34488" i_length="118">
            <donor d_prob="0.921" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34487" g_stop="34412" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="311" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34411" i_stop="33250" i_length="1162">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33249" g_stop="32823" g_length="427"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="738" r_length="427" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E542212" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E542212" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35498" e_stop="35359"/>
          <exon e_start="34697" e_stop="34606"/>
          <exon e_start="34487" e_stop="34412"/>
          <exon e_start="33249" e_stop="32823"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCGAAAAAAAACCCTCTTGCCACCGGTTCGCCACCGCCTGCGGCAAATCCGCCTCTCTTGTCGCCGTGAAGTTTCCTGCCTGCGGTGTTTGGTTGTCTTCGATCTCAAACTCTCGATTATACCGTCTGCTCTTTTATTGGTATGTATCTCTCACTATTTCTGTTAGCTAATCTTTCTGCATTTGATTTTGCTGGATTGAAGGAATTGCTTTGTTTGAACTATTTCGCCGGTAATGGAGTGATTTACTTGCTCTTTTCTTAAAACTGCACTGTTTTATCTTCTTCTATTTATTTGTTTCTTTTTGTTCTCCATATTTCTTTTAGGGCTTTTCGGTGTTGTTCATTGAATCTAATTGACAGAGGTTCATTTTTAGGAGTTGGAAAAGAAAAAGAAAAATCGAGGTTCAAAATATGATTGAAAGAACATTATTTGTTTGTCCTTGATAATCTTCTGTTTACCTCTCTTACTCAAAAAAATGAGAATTAGTCAATGTATTGATGTAAATGCGTCTAATTTTATTTGCAGAGTTCATAAATTGCTAAATAAGATCAAACTGGTTGTAATTTTTATGGTGAATTTCTCAATTTGTAAATGGAGATGTTTTTTATTTGTATGTCAGCAATATTATTGTAAGTTTATTTGCTTTAGGTTTTTGCCATTTTTAGCCTTTTTTAGCACGATTGATTTGTCTTTATAAGCTGAAAAGACGGATAAACTGAACCAGAGCCCAAAGTATTGGATAATTGACCATATGTATACTATATCTGGACATGTTAATGATAGCATGTTTATGTTCAAAGCAGTGTGGCACCTGGAATCTCTAAATTCTGAAGCCTCTCTTTGACCGACTTTGGTGAAATACTCGTCTCTTTCTCAAAGTAAAATCTGAGTTGTAAGTTCCCTTTTTCCTCATTTTCTGTCCATCCAGCTCCTCCATAAACTGATTCTCTTTGTCTCTGCTTATACTGAAGCCATTACTTTGTTCTCTGTCCAATGCTTTTTATTGCTAGATGGAGAATTCAAATACTCCAGCATCTGATTCGAACGCTGCCAAAGCTGAAGCTGAACAGCTGCCAACAGCTCCCGGTAAGAGACCTCCTCCTCCTTCTCAACTGGAAACAACTCTACTCAATTTATTTGTGGTTACTGGCGTCCTGTCATTTGGGATATCATCTCAAGCTGATTTAGAATATAGAGCTAATGAATAGGGAAAATTGTATATAATAGCAAACTAATAACCTAAAATAAATTGAGTAGCTAGGGTTTAATTTAATTGTGCTCCATAGCAAACGTTAGTTAAAGTTTGCCAGGCGTCTCTCTCCCAAAAATCTCGCTCGCCACTCTCCGTTCTCGCTCGCCTCTCTCACTTTATACACAAAAGTGTATAAATTCTGTTTCTGTTTTGTATAAAGCGAGAGAAAATTGTATATACACATGCAAAAATATATATCTTCGTGTTATACACTTAATTATACTATTTACAAACATTTTACTTCAAATATTGCAGAGAAAAAGGCCAACGAATTATACAATTGCGAATTATACAATTGCAGTGAAATACAATTTTCTCTAACTTTATACAACAGAAGTGTATATATTGTGTTTCTGTTTTTGTATAAAGCCAGAGAAAAACATATATCTTTCTTGCTATACACTTATAATTATGCAATATACAAACATTTTAATTCGATTCAATTGTATGCGAAGCAAATTTTATAAAAATATTGCAGCGAATTATACAATTGTGCATTATACAATCGCAGTGAAATAGGATAGCGAATTATACAATTGCAGCAAAATAAGTCAGCCAATTATACAATTTACATTGATGATAAGTCACTGTAATCTGATTCTACATCACCATTATCAGATTCTAAGAAGCTGCAGCTACCACTGTGCAGCGTATTAGAATTAAATCTTCTGAATTGTTGGTGTATAATCTGATAATGCACTGTAATTTGAGTAGCTGCTGTTACCCCCATAGTAAGTATTAACATAAACTGTTCAGAGGTTTAGTTCTAGTCCATATATGATTATCTCGACTTTGCCACTGAAGATGACTGTACGAATGTTCTCATCAATACTGTTTTTGTTAGTACCCCGGGTTTGCATATATTATTATGTATTCTACGCTAGCAAATATTAATCCTTAGTTTCTTTTCTCATCTAGCTCGCTTTTGCCTTCTTTTGTCAATTTACTGTGGCTTCTTTTGCTTAATATGTTTTTGTATACTTTCCTCTATTGCAGTATGCAATTTTTTCAAAAAACCATCCAAGGGAAAAAATATCAGAAAGCGTCCTACAGTTGAAGAGGGAGAGAATGAAGATGCAGAAGGAGATAGTTCAGTCATATATACCAAGAAAAAGCCAGCGGTTGCGAATAATAAGCTGCACTTCTCAACTGGACCTTCAAAGTCCAACAAGGATACTGACTCCAATGTAGATTCAAAAGCGGCTCGTTTTCATTTCGAGTCCTCAAAGGAAATTCAAGTTCAAAATGATAGTAGAGCAACAGCTACTTTAGAAACTGAGACTGAGTTCTCTAGAGATGCCCGGGCCATTCGAGAAAAAGCTCTGAAGCAGGCAGAGGAGGCTTTAAAGGGAAAAAGCAAGACAGGTGGTGATGACAAATTGTATAAAGGTATGAATCAATATACTGATTACAAAGCTGGTTT</genome_strand>
        <mrna_strand>GT-GCCGAAAAACCCTCTTGCCACCGGTTCGCCACCGCCTGCGGCAAATCCGCCTCTCTTGTCGCCGTGAAGTTTCCTGCCTGCGGTGTTTGGTTGTCTTCGATCTCAAACTCTCGATTATACCGTCTGCTCTTTTATTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGTGGCACCTGGAATCTCTAAATTCTGAAGCCTCTCTTTGACCGACTTTGGTGAAATACTCGTCTCTTTCTCAAAGTAAAATCTGAGTT......................................................................................................................ATGGAGAATTCAAATACTCCAGCATCTGATTCGAACGCTGCCAAAGCTGAAGCTGAACAGCTGCCAACAGCTCCCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCAATTTTTTCAAAAAACCATCCAAGGGAAAAAATATCAGAAAGCGTCCTACAGTTGAAGAGGGAGAGAATGAAGATGCAGAACGAGATAGTTCAGTCATATATACCAAGAAAAAGCCAGCGGTTGCGAATAATAAGCTGCACTTCTCAACTGGACCTTCAAAGTCCAACAAGGATACTGACTCCAATGTAGATTCAAAAGCGGCTCGTTTTCATTTCGAGTCCTCAAAGGAAATTCAAGTTCAAAATGATAGTAGAGCAACAGCTACTTTAGAAACTGAGACTGAGTTCTCTAGAGATGCCCGGGCCATTCGAGAAAAAGCTCTGAAGCAGGCAGAGGATGCTTGTAAGGGAAAAAGCAAGACACGTGGTGATGACAAATTGTATAAAGGTATGAATCACTATACTGATTACAAAGCTGGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E298050" ref_strand="+" ref_description="SGN-E298050 [cLEW-12-I2]">
      <seq>ctcgtgccgaaaaaccctcttgccaccggttcgccaccgcctgcggcaaatccgcctctcttgtcgccgtgaagtactctgcctggggtgggtgggagtcttcaatcccaaactctcgatgataccggctgctcttctattgcagtgtggcacctggaatctctaaattctgaagcctctctttgaccgactttggtgaaatactcgtctctttctcaaagtaaaatctgagttatggagaattcaaatactccagcatctgattcgaacgctgccaaagctgaagctgaacagctgccaacagctcccgtatgcaattttttcaaaaaaccatccaacggaaaaaatatcagaaagcggcctacagttgaagagggagagaatgaagatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="35791" stop="32869"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35498" g_stop="35359" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="4" r_stop="142" r_length="139" r_score="0.879"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35358" i_stop="34698" i_length="661">
            <donor d_prob="0.994" d_score="0.86"/>
            <acceptor a_prob="0.424" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34697" g_stop="34606" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="234" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34605" i_stop="34488" i_length="118">
            <donor d_prob="0.921" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34487" g_stop="34412" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="310" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34411" i_stop="33250" i_length="1162">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33249" g_stop="33169" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="391" r_length="81" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E298050" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>389</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E298050" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35498" e_stop="35359"/>
          <exon e_start="34697" e_stop="34606"/>
          <exon e_start="34487" e_stop="34412"/>
          <exon e_start="33249" e_stop="33169"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCGAAAAAAAACCCTCTTGCCACCGGTTCGCCACCGCCTGCGGCAAATCCGCCTCTCTTGTCGCCGTGAAGTTTCCTGCCTGCGGTGTTTGGTTGTCTTCGATCTCAAACTCTCGATTATACCGTCTGCTCTTTTATTGGTATGTATCTCTCACTATTTCTGTTAGCTAATCTTTCTGCATTTGATTTTGCTGGATTGAAGGAATTGCTTTGTTTGAACTATTTCGCCGGTAATGGAGTGATTTACTTGCTCTTTTCTTAAAACTGCACTGTTTTATCTTCTTCTATTTATTTGTTTCTTTTTGTTCTCCATATTTCTTTTAGGGCTTTTCGGTGTTGTTCATTGAATCTAATTGACAGAGGTTCATTTTTAGGAGTTGGAAAAGAAAAAGAAAAATCGAGGTTCAAAATATGATTGAAAGAACATTATTTGTTTGTCCTTGATAATCTTCTGTTTACCTCTCTTACTCAAAAAAATGAGAATTAGTCAATGTATTGATGTAAATGCGTCTAATTTTATTTGCAGAGTTCATAAATTGCTAAATAAGATCAAACTGGTTGTAATTTTTATGGTGAATTTCTCAATTTGTAAATGGAGATGTTTTTTATTTGTATGTCAGCAATATTATTGTAAGTTTATTTGCTTTAGGTTTTTGCCATTTTTAGCCTTTTTTAGCACGATTGATTTGTCTTTATAAGCTGAAAAGACGGATAAACTGAACCAGAGCCCAAAGTATTGGATAATTGACCATATGTATACTATATCTGGACATGTTAATGATAGCATGTTTATGTTCAAAGCAGTGTGGCACCTGGAATCTCTAAATTCTGAAGCCTCTCTTTGACCGACTTTGGTGAAATACTCGTCTCTTTCTCAAAGTAAAATCTGAGTTGTAAGTTCCCTTTTTCCTCATTTTCTGTCCATCCAGCTCCTCCATAAACTGATTCTCTTTGTCTCTGCTTATACTGAAGCCATTACTTTGTTCTCTGTCCAATGCTTTTTATTGCTAGATGGAGAATTCAAATACTCCAGCATCTGATTCGAACGCTGCCAAAGCTGAAGCTGAACAGCTGCCAACAGCTCCCGGTAAGAGACCTCCTCCTCCTTCTCAACTGGAAACAACTCTACTCAATTTATTTGTGGTTACTGGCGTCCTGTCATTTGGGATATCATCTCAAGCTGATTTAGAATATAGAGCTAATGAATAGGGAAAATTGTATATAATAGCAAACTAATAACCTAAAATAAATTGAGTAGCTAGGGTTTAATTTAATTGTGCTCCATAGCAAACGTTAGTTAAAGTTTGCCAGGCGTCTCTCTCCCAAAAATCTCGCTCGCCACTCTCCGTTCTCGCTCGCCTCTCTCACTTTATACACAAAAGTGTATAAATTCTGTTTCTGTTTTGTATAAAGCGAGAGAAAATTGTATATACACATGCAAAAATATATATCTTCGTGTTATACACTTAATTATACTATTTACAAACATTTTACTTCAAATATTGCAGAGAAAAAGGCCAACGAATTATACAATTGCGAATTATACAATTGCAGTGAAATACAATTTTCTCTAACTTTATACAACAGAAGTGTATATATTGTGTTTCTGTTTTTGTATAAAGCCAGAGAAAAACATATATCTTTCTTGCTATACACTTATAATTATGCAATATACAAACATTTTAATTCGATTCAATTGTATGCGAAGCAAATTTTATAAAAATATTGCAGCGAATTATACAATTGTGCATTATACAATCGCAGTGAAATAGGATAGCGAATTATACAATTGCAGCAAAATAAGTCAGCCAATTATACAATTTACATTGATGATAAGTCACTGTAATCTGATTCTACATCACCATTATCAGATTCTAAGAAGCTGCAGCTACCACTGTGCAGCGTATTAGAATTAAATCTTCTGAATTGTTGGTGTATAATCTGATAATGCACTGTAATTTGAGTAGCTGCTGTTACCCCCATAGTAAGTATTAACATAAACTGTTCAGAGGTTTAGTTCTAGTCCATATATGATTATCTCGACTTTGCCACTGAAGATGACTGTACGAATGTTCTCATCAATACTGTTTTTGTTAGTACCCCGGGTTTGCATATATTATTATGTATTCTACGCTAGCAAATATTAATCCTTAGTTTCTTTTCTCATCTAGCTCGCTTTTGCCTTCTTTTGTCAATTTACTGTGGCTTCTTTTGCTTAATATGTTTTTGTATACTTTCCTCTATTGCAGTATGCAATTTTTTCAAAAAACCATCCAAGGGAAAAAATATCAGAAAGCGTCCTACAGTTGAAGAGGGAGAGAATGAAGATG</genome_strand>
        <mrna_strand>GT-GCCGAAAAACCCTCTTGCCACCGGTTCGCCACCGCCTGCGGCAAATCCGCCTCTCTTGTCGCCGTGAAGTACTCTGCCTGGGGTGGGTGGGAGTCTTCAATCCCAAACTCTCGATGATACCGGCTGCTCTTCTATTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGTGGCACCTGGAATCTCTAAATTCTGAAGCCTCTCTTTGACCGACTTTGGTGAAATACTCGTCTCTTTCTCAAAGTAAAATCTGAGTT......................................................................................................................ATGGAGAATTCAAATACTCCAGCATCTGATTCGAACGCTGCCAAAGCTGAAGCTGAACAGCTGCCAACAGCTCCCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCAATTTTTTCAAAAAACCATCCAACGGAAAAAATATCAGAAAGCGGCCTACAGTTGAAGAGGGAGAGAATGAAGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E393076" ref_strand="+" ref_description="SGN-E393076 [TUS-37-J4]">
      <seq>taaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaataaaaacagaatttatttttttttgtgtatatagcgagatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="33514" stop="34413"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33814" g_stop="34139" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="325" r_length="325" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E393076" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>326</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E393076" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33814" e_stop="34139"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTTTGTATATTGCATAATTATAAGTGTATAGCAAGAAAGATATATGTTTTTCTCTGGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTGTATAATTCGCAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATAGTATAATTAAGTGTATAACACGAAGATATATATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAACAGAATTTATACACTTTTGTGTATAAAGTGAGAGAG</genome_strand>
        <mrna_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAG-AATATATATGTTTTTGTCTCGCTTTATACAAAAACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAAAAACAGAATTTATTTTTTTTTGTGTATATAGCGAGATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E393075" ref_strand="+" ref_description="SGN-E393075 [TUS-37-J2]">
      <seq>taaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaatagaaacagaggttttttttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="33514" stop="34413"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33814" g_stop="34122" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="308" r_length="308" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E393075" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>309</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E393075" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33814" e_stop="34122"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTTTGTATATTGCATAATTATAAGTGTATAGCAAGAAAGATATATGTTTTTCTCTGGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTGTATAATTCGCAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATAGTATAATTAAGTGTATAACACGAAGATATATATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAACAGAATTTATACACTTTTG</genome_strand>
        <mrna_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAG-AATATATATGTTTTTGTCTCGCTTTATACAAAAACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAGAAACAGAGGTTTTTTTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E392727" ref_strand="+" ref_description="SGN-E392727 [TUS-37-J5]">
      <seq>taatatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtcacgctttatacaaaatttaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="33514" stop="34267"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33814" g_stop="33967" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="153" r_length="153" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E392727" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>154</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E392727" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33814" e_stop="33967"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTTTGTATATTGCATAATTATAAGTGTATAGCAAGAAAGATATATGTTTTTCTCTGGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTGTATAATTCGCAATT</genome_strand>
        <mrna_strand>TAATATGTATGTATATTGCATAATTATAAGTGTATGGCAAG-AATATATATGTTTTTGTCACGCTTTATACAAAATTTAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E200845" ref_strand="+" ref_description="SGN-E200845 [cLEC-5-G3]">
      <seq>aaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaatagaaacagaatttatacacttctgtgtatatagcgagataggcgagcgagaatggagagtggcgagcgagatttttgggagggagacgcctgacaaactttagctaacgtttgctatggagcacaattaaatcaaactctagctactccatttagttagattactag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="33515" stop="34566"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33815" g_stop="34266" g_length="452"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="450" r_length="450" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E200845" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>452</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E200845" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33815" e_stop="34266"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGTTTGTATATTGCATAATTATAAGTGTATAGCAAGAAAGATATATGTTTTTCTCTGGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTGTATAATTCGCAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATAGTATAATTAAGTGTATAACACGAAGATATATATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAACAGAATTTATACACTTTTGTGTATAAAGTGAGAGAGGCGAGCGAGAACGGAGAGTGGCGAGCGAGATTTTTGGGAGAGAGACGCCTGGCAAACTTTAACTAACGTTTGCTATGGAGCACAATTAAATTAAACCCTAGCTACTCAATTTATTTTAGGTTATTAG</genome_strand>
        <mrna_strand>AAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAG-AATATATATGTTTTTGTCTCGCTTTATACAAAAACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAGAAACAGAATTTATACACTTCTGTGTATATAGCGAGATAGGCGAGCGAGAATGGAGAGTGGCGAGCGAGATTTTTGGGAGGGAGACGCCTGACAAACTTTAGCTAACGTTTGCTATGGAGCACAATTAAATCAAACTCTAGCTACTCCATTTA-GTTAGATTACTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E343589" ref_strand="+" ref_description="SGN-E343589 [cTOF-20-G8]">
      <seq>aaagaagaaaaaaaagccctctctctcaaaaacaattaaagatgtgtaattccaaaactaaactgcagagcagcgcacaaactctctcacaaattaatggccgccctgttcttcaaccacatagcaatatagttcctctttacgaacgccgcaactcgcttaaaaagacaacacacactgctgcacctgttactgcaaatggaagtactaaagtcaagatgagttcatcaacaactccaccggtctcacctaaaatgaagtcgccaagactaccagctattaagagagggaataacattgatcctaatggcttgagttcaagtgctgagaaaattgtgacacccaaagggactgctaataaagccccaattctgttaaagaagcccaagaaaagcagcgggggcttagcctcaccctcttctgtggagaattcttcattgaaatattcttcttccttgatagtcgaggctccgggaagtatagcagcagcaagaagggaacaagtagcaattgcacaagtgcagaggaaaatgaaaattgcgcattatggaagaacaaaatcagccaagtatgaaggaaaagtatcttctcttgacccttccttcgcctcagcagttatccctaatcctagagaggacaaaagatgcagctttatcacacctaattcagacccactctatattgcataccatgatgaagaatggggagttccagtacatgatgataatctgctttttgaattgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="45079" stop="46636"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45379" g_stop="46047" g_length="669"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="669" r_length="669" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46048" i_stop="46171" i_length="124">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46172" g_stop="46229" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="670" r_stop="727" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46230" i_stop="46317" i_length="88">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46318" g_stop="46336" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="728" r_stop="746" r_length="19" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E343589" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>746</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E343589" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45379" e_stop="46047"/>
          <exon e_start="46172" e_stop="46229"/>
          <exon e_start="46318" e_stop="46336"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAAGAAAAAAAAGCCCTCTCTCTCAAAAACAATTAAAGATGTGTAATTCCAAAACTAAACTGCAGAGCAGCGCACAAACTCTCTCACAAATTAATGGCCGCCCTGTTCTTCAACCACATAGCAATATAGTTCCTCTTTACGAACGCCGCAACTCGCTTAAAAAGACAACACACACTGCTGCACCTGTTACTGCAAATGGAAGTACTAAAGTCAAGATGAGTTCATCAACAACTCCACCGGTCTCACCTAAAATGAAGTCGCCAAGACTACCAGCTATTAAGAGAGGGAATAACATTGATCCTAATGGCTTGAGTTCAAGTGCTGAGAAAATTGTGACACCCAAAGGGACTGCTAATAAAGCCCCAATTCTGTTAAAGAAGCCCAAGAAAAGCAGCGGGGGCTTAGCCTCACCCTCTTCTGTGGAGAATTCTTCATTGAAATATTCTTCTTCCTTGATAGTCGAGGCTCCGGGAAGTATAGCAGCAGCAAGAAGGGAACAAGTAGCAATTGCACAAGTGCAGAGGAAAATGAAAATTGCGCATTATGGAAGAACAAAATCAGCCAAGTATGAAGGAAAAGTATCTTCTCTTGACCCTTCCTTCGCCTCAGCAGTTATCCCTAATCCTAGAGAGGACAAAAGATGCAGCTTTATCACACCTAATTCAGGTAAAAAGCACCTCAATTCTACACTTAAAGAGCAATTAAGTACTATGTTCTAACACAAAGACACACAAATTACGGGTTTTCAATAAATAGGACTAAAGTTCTTGGTGTTTTCTTGTGTTTTCAGACCCACTCTATATTGCATACCATGATGAAGAATGGGGAGTTCCAGTACATGATGATAAGTAAGAATCGTTTTTTCCCCTGTTTTTCTGCTTTCTGCACATTTATCAGGTTCGTTCTTGGACTAATTTCCTTATTTTACCTACTCAGTCTGCTTTTTGAATTGCTG</genome_strand>
        <mrna_strand>AAAGAAGAAAAAAAAGCCCTCTCTCTCAAAAACAATTAAAGATGTGTAATTCCAAAACTAAACTGCAGAGCAGCGCACAAACTCTCTCACAAATTAATGGCCGCCCTGTTCTTCAACCACATAGCAATATAGTTCCTCTTTACGAACGCCGCAACTCGCTTAAAAAGACAACACACACTGCTGCACCTGTTACTGCAAATGGAAGTACTAAAGTCAAGATGAGTTCATCAACAACTCCACCGGTCTCACCTAAAATGAAGTCGCCAAGACTACCAGCTATTAAGAGAGGGAATAACATTGATCCTAATGGCTTGAGTTCAAGTGCTGAGAAAATTGTGACACCCAAAGGGACTGCTAATAAAGCCCCAATTCTGTTAAAGAAGCCCAAGAAAAGCAGCGGGGGCTTAGCCTCACCCTCTTCTGTGGAGAATTCTTCATTGAAATATTCTTCTTCCTTGATAGTCGAGGCTCCGGGAAGTATAGCAGCAGCAAGAAGGGAACAAGTAGCAATTGCACAAGTGCAGAGGAAAATGAAAATTGCGCATTATGGAAGAACAAAATCAGCCAAGTATGAAGGAAAAGTATCTTCTCTTGACCCTTCCTTCGCCTCAGCAGTTATCCCTAATCCTAGAGAGGACAAAAGATGCAGCTTTATCACACCTAATTCAG............................................................................................................................ACCCACTCTATATTGCATACCATGATGAAGAATGGGGAGTTCCAGTACATGATGATAA........................................................................................TCTGCTTTTTGAATTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E330414" ref_strand="+" ref_description="SGN-E330414 [cTOD-4-E14]">
      <seq>aaaaaaaagccctctctctcaaaaacaattaaagatgtgtaattccaaaactaaactgcagagcagcgcacaaactctctcacaaattaatggccgccctgttcttcaaccacatagcaatatagttcctctttacgaacgccgcaactcgcttaaaaagacaacacacactgctgcacctgttactgcaaatggaagtactaaagtcaagatgagttcatcaacaactccaccggtctcacctaaaatgaagtcgccaagactaccagctattaagagagggaataacattgatcctaatggcttgagttcaagtgctgagaaaattgtgacacccaaagggactgctaataaagccccaattctgttaaagaagcccaagaaaagcagcgggggcttagcctcaccctcttctgtggagaattcttcattgaaatattcttcttccttgatagtcgaggctccgggaagtatagcagcagcaagaagggaacaagtagcaattgcacaagtgcagaggaaaatgaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="45086" stop="46215"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45386" g_stop="45915" g_length="530"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="530" r_length="530" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E330414" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E330414" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45386" e_stop="45915"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAAAGCCCTCTCTCTCAAAAACAATTAAAGATGTGTAATTCCAAAACTAAACTGCAGAGCAGCGCACAAACTCTCTCACAAATTAATGGCCGCCCTGTTCTTCAACCACATAGCAATATAGTTCCTCTTTACGAACGCCGCAACTCGCTTAAAAAGACAACACACACTGCTGCACCTGTTACTGCAAATGGAAGTACTAAAGTCAAGATGAGTTCATCAACAACTCCACCGGTCTCACCTAAAATGAAGTCGCCAAGACTACCAGCTATTAAGAGAGGGAATAACATTGATCCTAATGGCTTGAGTTCAAGTGCTGAGAAAATTGTGACACCCAAAGGGACTGCTAATAAAGCCCCAATTCTGTTAAAGAAGCCCAAGAAAAGCAGCGGGGGCTTAGCCTCACCCTCTTCTGTGGAGAATTCTTCATTGAAATATTCTTCTTCCTTGATAGTCGAGGCTCCGGGAAGTATAGCAGCAGCAAGAAGGGAACAAGTAGCAATTGCACAAGTGCAGAGGAAAATGAAAA</genome_strand>
        <mrna_strand>AAAAAAAAGCCCTCTCTCTCAAAAACAATTAAAGATGTGTAATTCCAAAACTAAACTGCAGAGCAGCGCACAAACTCTCTCACAAATTAATGGCCGCCCTGTTCTTCAACCACATAGCAATATAGTTCCTCTTTACGAACGCCGCAACTCGCTTAAAAAGACAACACACACTGCTGCACCTGTTACTGCAAATGGAAGTACTAAAGTCAAGATGAGTTCATCAACAACTCCACCGGTCTCACCTAAAATGAAGTCGCCAAGACTACCAGCTATTAAGAGAGGGAATAACATTGATCCTAATGGCTTGAGTTCAAGTGCTGAGAAAATTGTGACACCCAAAGGGACTGCTAATAAAGCCCCAATTCTGTTAAAGAAGCCCAAGAAAAGCAGCGGGGGCTTAGCCTCACCCTCTTCTGTGGAGAATTCTTCATTGAAATATTCTTCTTCCTTGATAGTCGAGGCTCCGGGAAGTATAGCAGCAGCAAGAAGGGAACAAGTAGCAATTGCACAAGTGCAGAGGAAAATGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E333702" ref_strand="+" ref_description="SGN-E333702 [cTOD-22-G9]">
      <seq>aagccctctctctcaaaaacaattaaagatgtgtaattccaaaactaaactgcagagcagcgcacaaactctctcacaaattaatggccgccctgttcttcaaccacatagcaatatagttcctctttacgaacgccgcaactcgcttaaaaagacaacacacactgctgcacctgttactgcaaatggaagtactaaagtcaagatgagttcatcaacaactccaccggtctcacctaaaatgaagtcgccaagactaccagctattaagagagggaataacattgatcctaatggcttgagttcaagtgctgagaaaattgtgacacccaaagggactgctaataaagccccaattctgttaaagaagcccaagaaaagcagcgggggcttagcctcaccctcttctgtggagaattcttcattgaaatattcttcttccttgatagtcgaggctccgggaagtatagcagcagcaagaagggaacaagtagcaattgcacaagtgcagaggaaaatgaaaattgcgcattatggaaagaaacaaatcagccaagtatgaagggaaagtatcttctcttgacccttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="45092" stop="46280"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45392" g_stop="45980" g_length="589"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="590" r_length="590" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E333702" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>589</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E333702" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45392" e_stop="45980"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCCCTCTCTCTCAAAAACAATTAAAGATGTGTAATTCCAAAACTAAACTGCAGAGCAGCGCACAAACTCTCTCACAAATTAATGGCCGCCCTGTTCTTCAACCACATAGCAATATAGTTCCTCTTTACGAACGCCGCAACTCGCTTAAAAAGACAACACACACTGCTGCACCTGTTACTGCAAATGGAAGTACTAAAGTCAAGATGAGTTCATCAACAACTCCACCGGTCTCACCTAAAATGAAGTCGCCAAGACTACCAGCTATTAAGAGAGGGAATAACATTGATCCTAATGGCTTGAGTTCAAGTGCTGAGAAAATTGTGACACCCAAAGGGACTGCTAATAAAGCCCCAATTCTGTTAAAGAAGCCCAAGAAAAGCAGCGGGGGCTTAGCCTCACCCTCTTCTGTGGAGAATTCTTCATTGAAATATTCTTCTTCCTTGATAGTCGAGGCTCCGGGAAGTATAGCAGCAGCAAGAAGGGAACAAGTAGCAATTGCACAAGTGCAGAGGAAAATGAAAATTGCGCATTATGG-AAGAACAAAATCAGCCAAGTATGAAGGAAAAGTATCTTCTCTTGACCCTTCC</genome_strand>
        <mrna_strand>AAGCCCTCTCTCTCAAAAACAATTAAAGATGTGTAATTCCAAAACTAAACTGCAGAGCAGCGCACAAACTCTCTCACAAATTAATGGCCGCCCTGTTCTTCAACCACATAGCAATATAGTTCCTCTTTACGAACGCCGCAACTCGCTTAAAAAGACAACACACACTGCTGCACCTGTTACTGCAAATGGAAGTACTAAAGTCAAGATGAGTTCATCAACAACTCCACCGGTCTCACCTAAAATGAAGTCGCCAAGACTACCAGCTATTAAGAGAGGGAATAACATTGATCCTAATGGCTTGAGTTCAAGTGCTGAGAAAATTGTGACACCCAAAGGGACTGCTAATAAAGCCCCAATTCTGTTAAAGAAGCCCAAGAAAAGCAGCGGGGGCTTAGCCTCACCCTCTTCTGTGGAGAATTCTTCATTGAAATATTCTTCTTCCTTGATAGTCGAGGCTCCGGGAAGTATAGCAGCAGCAAGAAGGGAACAAGTAGCAATTGCACAAGTGCAGAGGAAAATGAAAATTGCGCATTATGGAAAGAAACAAATCAGCCAAGTATGAAGGGAAAGTATCTTCTCTTGACCCTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E374217" ref_strand="+" ref_description="SGN-E374217 [TUS-33-J13]">
      <seq>tcaaaaacaattaaagatgtgtaattccaaaactaaactgcagagcagcgcacaaactctctcacaaattaatggccgccctgttcttcaaccacatagcaatatagttcctctttacgaacgccgcaactcgcttaaaaagacaacacacactgctgcacctgttactgcaaatggaagtactaaagtcaagatgagttcatcaacaactccaccggtctcacctaaaatgaagtcgccaagactaccagctattaagagagggaataacattgatcctaatggcttgagttcaagtgctgagaaaattgtgacacccaaagggactgctaataaagccccaattctgttaaagaagcccaagaaaagcagcgggggcttagcctcaccctcttctgtggagaattcttcattgaaatattcttcttccttgatagtcgaggctccgggaagtatagcagcagcaagaagggaacaagtagcaattgcacaagtgcagaggaaaatgaaaattgcgcattatggaagaacaaaatcagccaagtatgaaggaaaagtatcttctcttgacccttccttcgcctcagcagttatccctaatcctagagaggacaaaagatgcagctttatcacacctaattcagacccactctatattgcataccatgatgaagaatggggagttccagtacatgatgataatctgctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="45104" stop="46529"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45404" g_stop="46047" g_length="644"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="644" r_length="644" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46048" i_stop="46171" i_length="124">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46172" g_stop="46229" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="645" r_stop="702" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46230" i_stop="46317" i_length="88">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46318" g_stop="46326" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="703" r_stop="711" r_length="9" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E374217" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>711</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E374217" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45404" e_stop="46047"/>
          <exon e_start="46172" e_stop="46229"/>
          <exon e_start="46318" e_stop="46326"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAAAACAATTAAAGATGTGTAATTCCAAAACTAAACTGCAGAGCAGCGCACAAACTCTCTCACAAATTAATGGCCGCCCTGTTCTTCAACCACATAGCAATATAGTTCCTCTTTACGAACGCCGCAACTCGCTTAAAAAGACAACACACACTGCTGCACCTGTTACTGCAAATGGAAGTACTAAAGTCAAGATGAGTTCATCAACAACTCCACCGGTCTCACCTAAAATGAAGTCGCCAAGACTACCAGCTATTAAGAGAGGGAATAACATTGATCCTAATGGCTTGAGTTCAAGTGCTGAGAAAATTGTGACACCCAAAGGGACTGCTAATAAAGCCCCAATTCTGTTAAAGAAGCCCAAGAAAAGCAGCGGGGGCTTAGCCTCACCCTCTTCTGTGGAGAATTCTTCATTGAAATATTCTTCTTCCTTGATAGTCGAGGCTCCGGGAAGTATAGCAGCAGCAAGAAGGGAACAAGTAGCAATTGCACAAGTGCAGAGGAAAATGAAAATTGCGCATTATGGAAGAACAAAATCAGCCAAGTATGAAGGAAAAGTATCTTCTCTTGACCCTTCCTTCGCCTCAGCAGTTATCCCTAATCCTAGAGAGGACAAAAGATGCAGCTTTATCACACCTAATTCAGGTAAAAAGCACCTCAATTCTACACTTAAAGAGCAATTAAGTACTATGTTCTAACACAAAGACACACAAATTACGGGTTTTCAATAAATAGGACTAAAGTTCTTGGTGTTTTCTTGTGTTTTCAGACCCACTCTATATTGCATACCATGATGAAGAATGGGGAGTTCCAGTACATGATGATAAGTAAGAATCGTTTTTTCCCCTGTTTTTCTGCTTTCTGCACATTTATCAGGTTCGTTCTTGGACTAATTTCCTTATTTTACCTACTCAGTCTGCTTTT</genome_strand>
        <mrna_strand>TCAAAAACAATTAAAGATGTGTAATTCCAAAACTAAACTGCAGAGCAGCGCACAAACTCTCTCACAAATTAATGGCCGCCCTGTTCTTCAACCACATAGCAATATAGTTCCTCTTTACGAACGCCGCAACTCGCTTAAAAAGACAACACACACTGCTGCACCTGTTACTGCAAATGGAAGTACTAAAGTCAAGATGAGTTCATCAACAACTCCACCGGTCTCACCTAAAATGAAGTCGCCAAGACTACCAGCTATTAAGAGAGGGAATAACATTGATCCTAATGGCTTGAGTTCAAGTGCTGAGAAAATTGTGACACCCAAAGGGACTGCTAATAAAGCCCCAATTCTGTTAAAGAAGCCCAAGAAAAGCAGCGGGGGCTTAGCCTCACCCTCTTCTGTGGAGAATTCTTCATTGAAATATTCTTCTTCCTTGATAGTCGAGGCTCCGGGAAGTATAGCAGCAGCAAGAAGGGAACAAGTAGCAATTGCACAAGTGCAGAGGAAAATGAAAATTGCGCATTATGGAAGAACAAAATCAGCCAAGTATGAAGGAAAAGTATCTTCTCTTGACCCTTCCTTCGCCTCAGCAGTTATCCCTAATCCTAGAGAGGACAAAAGATGCAGCTTTATCACACCTAATTCAG............................................................................................................................ACCCACTCTATATTGCATACCATGATGAAGAATGGGGAGTTCCAGTACATGATGATAA........................................................................................TCTGCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E305731" ref_strand="+" ref_description="SGN-E305731 [cLEX-14-O17]">
      <seq>tcaaaaacaattaaagatgtgtaattccaaaactaaactgcagagcagcgcacaaactctctcacaaattaatggccgccctgttcttcaaccacatagcaatatagttcctctttacgaacgccgcaactcgcttaaaaagacaacacacactgctgcacctgttactgcaaatggaagtactaaagtcaagatgagttcatcaacaactccaccggtctcacctaaaatgaagtcgccaagactaccagctattaagagagggaataacattgatcctaatggcttgagttcaagtgctgagaaaattgtgacacccaaagggactgctaataaagccccaattctgttaaagaagcccaagaaaagcagcgggggcttagcctcaccctcttctgtggagaattcttcattgaaatattcttcttccttgatagtcgaggctccgggaagtatagcagcagcaagaagggaacaagtagcaattgcacaagtgcagaggaaaatgaaaattgcgcattatggaagaacaaaatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="45104" stop="46241"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45404" g_stop="45941" g_length="538"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="538" r_length="538" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E305731" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>538</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E305731" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45404" e_stop="45941"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAAAACAATTAAAGATGTGTAATTCCAAAACTAAACTGCAGAGCAGCGCACAAACTCTCTCACAAATTAATGGCCGCCCTGTTCTTCAACCACATAGCAATATAGTTCCTCTTTACGAACGCCGCAACTCGCTTAAAAAGACAACACACACTGCTGCACCTGTTACTGCAAATGGAAGTACTAAAGTCAAGATGAGTTCATCAACAACTCCACCGGTCTCACCTAAAATGAAGTCGCCAAGACTACCAGCTATTAAGAGAGGGAATAACATTGATCCTAATGGCTTGAGTTCAAGTGCTGAGAAAATTGTGACACCCAAAGGGACTGCTAATAAAGCCCCAATTCTGTTAAAGAAGCCCAAGAAAAGCAGCGGGGGCTTAGCCTCACCCTCTTCTGTGGAGAATTCTTCATTGAAATATTCTTCTTCCTTGATAGTCGAGGCTCCGGGAAGTATAGCAGCAGCAAGAAGGGAACAAGTAGCAATTGCACAAGTGCAGAGGAAAATGAAAATTGCGCATTATGGAAGAACAAAATCA</genome_strand>
        <mrna_strand>TCAAAAACAATTAAAGATGTGTAATTCCAAAACTAAACTGCAGAGCAGCGCACAAACTCTCTCACAAATTAATGGCCGCCCTGTTCTTCAACCACATAGCAATATAGTTCCTCTTTACGAACGCCGCAACTCGCTTAAAAAGACAACACACACTGCTGCACCTGTTACTGCAAATGGAAGTACTAAAGTCAAGATGAGTTCATCAACAACTCCACCGGTCTCACCTAAAATGAAGTCGCCAAGACTACCAGCTATTAAGAGAGGGAATAACATTGATCCTAATGGCTTGAGTTCAAGTGCTGAGAAAATTGTGACACCCAAAGGGACTGCTAATAAAGCCCCAATTCTGTTAAAGAAGCCCAAGAAAAGCAGCGGGGGCTTAGCCTCACCCTCTTCTGTGGAGAATTCTTCATTGAAATATTCTTCTTCCTTGATAGTCGAGGCTCCGGGAAGTATAGCAGCAGCAAGAAGGGAACAAGTAGCAATTGCACAAGTGCAGAGGAAAATGAAAATTGCGCATTATGGAAGAACAAAATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E321931" ref_strand="+" ref_description="SGN-E321931 [cTOB-29-M17]">
      <seq>gaggagctgtcgacaactctaccagaattttagagattaagaagacatttggttcgttcgacaagtatctgtggggattcgtgaacaacaagcccattgcaacacaatacaaggcatgcaacaaaatcccagtgaagacttcaaaatcagaaaccataagtaaagacatggtcaaaagagggttccgctatgtcggccccaccgttatacactcgttcatgcaggcagccggactcaccaacgaccacctgatcgcctgtccacgacatctcccgtgtgtggcattggcaactcaacctgcaccccctgccctataatttaccttttatcaactactctactaagccatagttttaagtttagcaaacaaaagttgttgaggaaacctagttgagattgtctaacaatattctaccttcttcttttttttggggtgatgaatttagatgttttaagtgattttatttgatgatgtaagatattgagttggttaaatgtatagaaagtagaaaggaataaagtaaggatggtatagatatggggggacaggaagcatgtgcagggtgggcaggggaatgccaattgcatgtgccatttgatttaattttgtgtgggcactgaccaccaccaccatcagcagcaaaagccatcactgcaccactatttacttgcacttgcgtgcttttgaacagtgacttatctttcaagggatagatcatcaagtacacagaggaagagcctttgctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="46723" stop="48067"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47056" g_stop="47767" g_length="712"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="747" r_length="712" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E321931" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>712</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E321931" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47056" e_stop="47767"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTAAGAAGACATTTGGTTCGTTCGACAAGTATCTGTGGGGATTCGTGAACAACAAGCCCATTGCAACACAATACAAGGCATGCAACAAAATCCCAGTGAAGACTTCAAAATCAGAAACCATAAGTAAAGACATGGTCAAAAGAGGGTTCCGCTATGTCGGCCCCACCGTTATACACTCGTTCATGCAGGCAGCCGGACTCACCAACGACCACCTGATCGCCTGTCCACGACATCTCCCGTGTGTGGCATTGGCAACTCAACCTGCACCCCCTGCCCTATAATTTACCTTTTATCAACTACTCTACTAAGCCATAGTTTTAAGTTTAGCAAACAAAAGTTGTTGAGGAAACCTAGTTGAGATTGTCTAACAATATTCTACCTTCTTCTTTTTTTTGGGGTGATGAATTTAGATGTTTTAAGTGATTTTATTTGATGATGTAAGATATTGAGTTGGTTAAATGTATAGAAAGTAGAAAGGAATAAAGTAAGGATGGTATAGATATGGGGGGACAGGAAGCATGTGCAGGGTGGGCAGGGGAATGCCAATTGCATGTGCCATTTGATTTAATTTTGTGTGGGCACTGACCACCACCACCATCAGCAGCAAAAGCCATCACTGCACCACTATTTACTTGCACTTGCGTGCTTTTGAACAGTGACTTATCTTTCAAGGATAAGATCATCAAGTACACAGAGGAGGAGCCTTTGCTT</genome_strand>
        <mrna_strand>ATTAAGAAGACATTTGGTTCGTTCGACAAGTATCTGTGGGGATTCGTGAACAACAAGCCCATTGCAACACAATACAAGGCATGCAACAAAATCCCAGTGAAGACTTCAAAATCAGAAACCATAAGTAAAGACATGGTCAAAAGAGGGTTCCGCTATGTCGGCCCCACCGTTATACACTCGTTCATGCAGGCAGCCGGACTCACCAACGACCACCTGATCGCCTGTCCACGACATCTCCCGTGTGTGGCATTGGCAACTCAACCTGCACCCCCTGCCCTATAATTTACCTTTTATCAACTACTCTACTAAGCCATAGTTTTAAGTTTAGCAAACAAAAGTTGTTGAGGAAACCTAGTTGAGATTGTCTAACAATATTCTACCTTCTTCTTTTTTTTGGGGTGATGAATTTAGATGTTTTAAGTGATTTTATTTGATGATGTAAGATATTGAGTTGGTTAAATGTATAGAAAGTAGAAAGGAATAAAGTAAGGATGGTATAGATATGGGGGGACAGGAAGCATGTGCAGGGTGGGCAGGGGAATGCCAATTGCATGTGCCATTTGATTTAATTTTGTGTGGGCACTGACCACCACCACCATCAGCAGCAAAAGCCATCACTGCACCACTATTTACTTGCACTTGCGTGCTTTTGAACAGTGACTTATCTTTCAAGGGATAGATCATCAAGTACACAGAGGAAGAGCCTTTGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E537685" ref_strand="+" ref_description="SGN-E537685 [TUS-56-G17](-)">
      <seq>ttttaagtgattttatttgatgatgtaagatattgagttggttaaatgtatagaaagtagaaaggaataaagtaaggatggtatagatatggggggacaggaagcatgtccagggtgggcaggggaatgccaattgcatgtgccatttgatttaattttgtgggggcattgacccccccccccttcagcagcaaaagccatcattgcaccactatttatttgcacttgggtgtttttgaacagtgatttttttttcaaggataagatcttcaagtacccagggggggggcttttgtttcccccaattataggcccttcattcctgttgctgcagggaataaataggggatgatttattccctgcatcattcaacaaaaatgaagccacgtgcagccccttaacacaaaagtaaaggggcattagtttggttatgtttgttgccccatttttgatatgtaaacttgacagagaggcaagcacaaagtcccttgcagtttgtatcatatgtttagtggggaattttgagggtttttttttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="47170" stop="119194"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47470" g_stop="48009" g_length="540"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="540" r_length="540" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48010" i_stop="48280" i_length="271">
            <donor d_prob="0.000" d_score="0.90"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48281" g_stop="48307" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="541" r_stop="567" r_length="27" r_score="0.556"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48308" i_stop="48474" i_length="167">
            <donor d_prob="0.223" d_score="0.00"/>
            <acceptor a_prob="0.802" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48475" g_stop="48508" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="568" r_stop="601" r_length="34" r_score="0.559"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E537685" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E537685" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47470" e_stop="48009"/>
          <exon e_start="48281" e_stop="48307"/>
          <exon e_start="48475" e_stop="48508"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTAAGTGATTTTATTTGATGATGTAAGATATTGAGTTGGTTAAATGTATAGAAAGTAGAAAGGAATAAAGTAAGGATGGTATAGATATGGGGGGACAGGAAGCATGTGCAGGGTGGGCAGGGGAATGCCAATTGCATGTGCCATTTGATTTAATTTTGTGTGGGCACTGACCACCACCACCATCAGCAGCAAAAGCCATCACTGCACCACTATTTACTTGCACTTGCGTGCTTTTGAACAGTGACTTATCTTTCAAGGATAAGATCATCAAGTACACAGAGGAGGAGCCTTTGCTTCCCCCAATTATAGGCCCTTCATTCCTGTTGCTGCAGGGAATAAATAGTGGATGATTTATTCCCTGCATCATTCAACAAAAATGAAGCCACGTGCAGCACCTTAACACAAAAGTAAAGGGGCATTAGTTTGGTTATGTTTGTTGCCCCATCTTTGATATGTAAACTTGACAGAGAGGCAAGCACAAAGTGCCTTGCAGTTTGTATCATATGTTTAGTGTGGAATTTTGAGTGTTTTTTCTTTGGCCCTGGCCTTCTTTTTTTCTTCTTATGGGGATTGTAATTCTATTATGGATTTTAGTGGCTATCAAGATATTTTATGGATGCACTTTTCGGGATTCTGTTCAATTTGATAAGTTAAGCATCTTCTTCTACATCACATGTGCTTCTCAGCTTTTAAAAGTCACTTTGGTGGATCAGATGGTAAAAGCAAAGCATATTCCCCATACATGTGCACATGGGATGTATAGCTCAGCAGTTCATTGCTTTTCTTTGCACCATTTGAAAGTGGATTGGAAATAAAATCTTAAAAGTAAAGTGCAGGCAAACAACACTTAATTTAGTTGAGGTTACGTAACAAATATTCGAAGTTGAAGTAAAAAAGTTTGGAAGTTGACAGATTTTTGACATGAATTTCACTTGAAAAAATTTGGCGTTTGTTAACAGTGTTTCTCTGCTATCATTGGTATGCAAACAATATGTATGTCTAGCAGGAAAATGTAAACAGATCCAAGACAAGAAGAA</genome_strand>
        <mrna_strand>TTTTAAGTGATTTTATTTGATGATGTAAGATATTGAGTTGGTTAAATGTATAGAAAGTAGAAAGGAATAAAGTAAGGATGGTATAGATATGGGGGGACAGGAAGCATGTCCAGGGTGGGCAGGGGAATGCCAATTGCATGTGCCATTTGATTTAATTTTGTGGGGGCATTGACCCCCCCCCCCTTCAGCAGCAAAAGCCATCATTGCACCACTATTTATTTGCACTTGGGTGTTTTTGAACAGTGATTTTTTTTTCAAGGATAAGATCTTCAAGTACCCAGGGGGGGGGCTTTTGTTTCCCCCAATTATAGGCCCTTCATTCCTGTTGCTGCAGGGAATAAATAGGGGATGATTTATTCCCTGCATCATTCAACAAAAATGAAGCCACGTGCAGCCCCTTAACACAAAAGTAAAGGGGCATTAGTTTGGTTATGTTTGTTGCCCCATTTTTGATATGTAAACTTGACAGAGAGGCAAGCACAAAGTCCCTTGCAGTTTGTATCATATGTTTAGTGGGGAATTTTGAGGGTTTTTTTTTAA...............................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAA.......................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E537688" ref_strand="+" ref_description="SGN-E537688 [TUS-56-G17]">
      <seq>ttttaagtgattttatttgatgatgtaagatattgagttggttaaatgtatagaaagtagaaaggaataaagtaaggatggtatagatatggggggacaggaagcatgtgcagggtgggcaggggaatgccaattgcatgtgccatttgatttaattttgtgtgggcactgaccaccaccaccatcagcagcaaaagccatcactgcaccactatttacttgcacttgcgtgcttttgaacagtgacttatctttcaaggataagatcatcaagtacacagaggaggagcctttgcttcccccaattataggcccttcattcctgttgctgcagggaataaatagtggatgatttattccctgcatcattcaacaaaaatgaagccacgtgcagcaccttaacacaaaagtaaaggggcattagtttggttatgtttgttgccccatctttgatatgtaaacttgacagagaggcaagcacaaagtgccttgcagtttgtatcatatgtttagtgtggaattttgagtgttttttcttaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="47170" stop="48307"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47470" g_stop="48012" g_length="543"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="543" r_length="543" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E537688" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E537688" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47470" e_stop="48012"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTAAGTGATTTTATTTGATGATGTAAGATATTGAGTTGGTTAAATGTATAGAAAGTAGAAAGGAATAAAGTAAGGATGGTATAGATATGGGGGGACAGGAAGCATGTGCAGGGTGGGCAGGGGAATGCCAATTGCATGTGCCATTTGATTTAATTTTGTGTGGGCACTGACCACCACCACCATCAGCAGCAAAAGCCATCACTGCACCACTATTTACTTGCACTTGCGTGCTTTTGAACAGTGACTTATCTTTCAAGGATAAGATCATCAAGTACACAGAGGAGGAGCCTTTGCTTCCCCCAATTATAGGCCCTTCATTCCTGTTGCTGCAGGGAATAAATAGTGGATGATTTATTCCCTGCATCATTCAACAAAAATGAAGCCACGTGCAGCACCTTAACACAAAAGTAAAGGGGCATTAGTTTGGTTATGTTTGTTGCCCCATCTTTGATATGTAAACTTGACAGAGAGGCAAGCACAAAGTGCCTTGCAGTTTGTATCATATGTTTAGTGTGGAATTTTGAGTGTTTTTTCTTTGGCC</genome_strand>
        <mrna_strand>TTTTAAGTGATTTTATTTGATGATGTAAGATATTGAGTTGGTTAAATGTATAGAAAGTAGAAAGGAATAAAGTAAGGATGGTATAGATATGGGGGGACAGGAAGCATGTGCAGGGTGGGCAGGGGAATGCCAATTGCATGTGCCATTTGATTTAATTTTGTGTGGGCACTGACCACCACCACCATCAGCAGCAAAAGCCATCACTGCACCACTATTTACTTGCACTTGCGTGCTTTTGAACAGTGACTTATCTTTCAAGGATAAGATCATCAAGTACACAGAGGAGGAGCCTTTGCTTCCCCCAATTATAGGCCCTTCATTCCTGTTGCTGCAGGGAATAAATAGTGGATGATTTATTCCCTGCATCATTCAACAAAAATGAAGCCACGTGCAGCACCTTAACACAAAAGTAAAGGGGCATTAGTTTGGTTATGTTTGTTGCCCCATCTTTGATATGTAAACTTGACAGAGAGGCAAGCACAAAGTGCCTTGCAGTTTGTATCATATGTTTAGTGTGGAATTTTGAGTGTTTTTTCTTAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E266117" ref_strand="+" ref_description="SGN-E266117 [cLEI-6-J7]">
      <seq>tttaagtgattttatttgatgatgtaagatattgagttggttaaatgtatagaaagtagaaaggaataaagtaaggatggtatagatatggggggacaggaagcatgtgcagggtgggcaggggaatgccaattgcatgtgccatttgatttaattttgtgtgggcactgaccaccaccaccatcagcagcaaaagccatcactgcaccactatttacttgcacttgcgtgcttttgaacagtgacttatctttcaaggataagatcatcaagtacacagaggaggagcctttgcttcccccaattataggcccttcattcctgttgctgcagggaataaatagtggatgatttattccctgcatcattcaacaaaaatgaagccacgtgcagcaccttaacacaaaagtaaaggggcattagtttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="47171" stop="48197"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47471" g_stop="47897" g_length="427"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="427" r_length="427" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E266117" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>427</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E266117" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47471" e_stop="47897"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAAGTGATTTTATTTGATGATGTAAGATATTGAGTTGGTTAAATGTATAGAAAGTAGAAAGGAATAAAGTAAGGATGGTATAGATATGGGGGGACAGGAAGCATGTGCAGGGTGGGCAGGGGAATGCCAATTGCATGTGCCATTTGATTTAATTTTGTGTGGGCACTGACCACCACCACCATCAGCAGCAAAAGCCATCACTGCACCACTATTTACTTGCACTTGCGTGCTTTTGAACAGTGACTTATCTTTCAAGGATAAGATCATCAAGTACACAGAGGAGGAGCCTTTGCTTCCCCCAATTATAGGCCCTTCATTCCTGTTGCTGCAGGGAATAAATAGTGGATGATTTATTCCCTGCATCATTCAACAAAAATGAAGCCACGTGCAGCACCTTAACACAAAAGTAAAGGGGCATTAGTTTG</genome_strand>
        <mrna_strand>TTTAAGTGATTTTATTTGATGATGTAAGATATTGAGTTGGTTAAATGTATAGAAAGTAGAAAGGAATAAAGTAAGGATGGTATAGATATGGGGGGACAGGAAGCATGTGCAGGGTGGGCAGGGGAATGCCAATTGCATGTGCCATTTGATTTAATTTTGTGTGGGCACTGACCACCACCACCATCAGCAGCAAAAGCCATCACTGCACCACTATTTACTTGCACTTGCGTGCTTTTGAACAGTGACTTATCTTTCAAGGATAAGATCATCAAGTACACAGAGGAGGAGCCTTTGCTTCCCCCAATTATAGGCCCTTCATTCCTGTTGCTGCAGGGAATAAATAGTGGATGATTTATTCCCTGCATCATTCAACAAAAATGAAGCCACGTGCAGCACCTTAACACAAAAGTAAAGGGGCATTAGTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E228661" ref_strand="+" ref_description="SGN-E228661 [cLEL-29-F1](-)">
      <seq>cttttgaacagtgacttatctttcaaggataagatcatcaagtacacagaggaggagcctttgcttcccccaattataggcccttcattcctgttgctgcagggaataaatagtggatgatttattccctgcatcattcaacaaaaatgaagccacgtgcagccccttaacacaaaagtaaaggggcattagtttggttatgtttgttgccccatctttgatatgtaaacttgacagagaggcaagcacaaagtgccttgcagtttgtatcatatgtttagtgtggaattttgagtgttttttctttggccctggccttctttttttcttcttatggggattgtaattctattatggattttagtggctatcaagatattttatggatgccaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="47402" stop="48391"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47702" g_stop="48089" g_length="388"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="388" r_length="388" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="392" polyA_stop="408"/>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E228661" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>388</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E228661" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47702" e_stop="48089"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTGAACAGTGACTTATCTTTCAAGGATAAGATCATCAAGTACACAGAGGAGGAGCCTTTGCTTCCCCCAATTATAGGCCCTTCATTCCTGTTGCTGCAGGGAATAAATAGTGGATGATTTATTCCCTGCATCATTCAACAAAAATGAAGCCACGTGCAGCACCTTAACACAAAAGTAAAGGGGCATTAGTTTGGTTATGTTTGTTGCCCCATCTTTGATATGTAAACTTGACAGAGAGGCAAGCACAAAGTGCCTTGCAGTTTGTATCATATGTTTAGTGTGGAATTTTGAGTGTTTTTTCTTTGGCCCTGGCCTTCTTTTTTTCTTCTTATGGGGATTGTAATTCTATTATGGATTTTAGTGGCTATCAAGATATTTTATGGAT</genome_strand>
        <mrna_strand>CTTTTGAACAGTGACTTATCTTTCAAGGATAAGATCATCAAGTACACAGAGGAGGAGCCTTTGCTTCCCCCAATTATAGGCCCTTCATTCCTGTTGCTGCAGGGAATAAATAGTGGATGATTTATTCCCTGCATCATTCAACAAAAATGAAGCCACGTGCAGCCCCTTAACACAAAAGTAAAGGGGCATTAGTTTGGTTATGTTTGTTGCCCCATCTTTGATATGTAAACTTGACAGAGAGGCAAGCACAAAGTGCCTTGCAGTTTGTATCATATGTTTAGTGTGGAATTTTGAGTGTTTTTTCTTTGGCCCTGGCCTTCTTTTTTTCTTCTTATGGGGATTGTAATTCTATTATGGATTTTAGTGGCTATCAAGATATTTTATGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E229141" ref_strand="+" ref_description="SGN-E229141 [cLEL-29-F1](-)">
      <seq>ttttgaacagtgacttatctttcaaggataagatcatcaagtacacagaggaggagcctttgcttcccccaattataggcccttcattcctgttgctgcagggaataaatagtggatgatttattccctgcatcattcaacaaaaatgaagccacgtgcagccccttaacacaaaagtaaaggggcattagtttggttatgtttgttgccccatctttgatatgtaaacttgacagagaggcaagcacaaagtgccttgcagtttgtatcatatgtttagtgtggaattttgagtgttttttctttggccctggccttctttttttcttcttatggggattgtaattctattatggattttagtggctatcaagatattttatggatgcaaaaaaaaacaaaaaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="47403" stop="48392"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47703" g_stop="48089" g_length="387"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="387" r_length="387" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="390" polyA_stop="405"/>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E229141" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>387</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E229141" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47703" e_stop="48089"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGAACAGTGACTTATCTTTCAAGGATAAGATCATCAAGTACACAGAGGAGGAGCCTTTGCTTCCCCCAATTATAGGCCCTTCATTCCTGTTGCTGCAGGGAATAAATAGTGGATGATTTATTCCCTGCATCATTCAACAAAAATGAAGCCACGTGCAGCACCTTAACACAAAAGTAAAGGGGCATTAGTTTGGTTATGTTTGTTGCCCCATCTTTGATATGTAAACTTGACAGAGAGGCAAGCACAAAGTGCCTTGCAGTTTGTATCATATGTTTAGTGTGGAATTTTGAGTGTTTTTTCTTTGGCCCTGGCCTTCTTTTTTTCTTCTTATGGGGATTGTAATTCTATTATGGATTTTAGTGGCTATCAAGATATTTTATGGAT</genome_strand>
        <mrna_strand>TTTTGAACAGTGACTTATCTTTCAAGGATAAGATCATCAAGTACACAGAGGAGGAGCCTTTGCTTCCCCCAATTATAGGCCCTTCATTCCTGTTGCTGCAGGGAATAAATAGTGGATGATTTATTCCCTGCATCATTCAACAAAAATGAAGCCACGTGCAGCCCCTTAACACAAAAGTAAAGGGGCATTAGTTTGGTTATGTTTGTTGCCCCATCTTTGATATGTAAACTTGACAGAGAGGCAAGCACAAAGTGCCTTGCAGTTTGTATCATATGTTTAGTGTGGAATTTTGAGTGTTTTTTCTTTGGCCCTGGCCTTCTTTTTTTCTTCTTATGGGGATTGTAATTCTATTATGGATTTTAGTGGCTATCAAGATATTTTATGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E339147" ref_strand="+" ref_description="SGN-E339147 [cTOF-6-D15]">
      <seq>aagcatggaaggcagcagcaaacaaggcaatgggattgaaggtgtttgataaccctaagttgttgaaggagagtttgaagaaggataagagaaagaaagagaagagttctgagaagtggaaggaaagaattcagactacggagaagatgaagaatgagcgacagcagaagagaagggataacattgctggcaaagccaaggagaagaagatgaggaagattgccaaaagggaaaagaagctcatgaggccgggctttgaggggcgaaaggaaggctacattactcaggataaaagctaaactggtcatgaactctttcttatgccttcttactttgaatttagctgctctctcatttggagagagttttgtgtttggtctgaaatcttttgctaattctgtgctagtcaagtttaagctttttctattcagtaagtagtatgttggctaattagcctatcccaactggtttaggattaagcattgttgattcatagtaacatgttagttcatgatttgttttcatgaagttagcattataatatatgcttgtcacccaaatatcattagtttgattggaacatattgtatgcaaacatttctcaaacagctgtggaaatggaacaaatatgagattgactgtgaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="56815" stop="55571"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56515" g_stop="55876" g_length="640"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="640" r_length="640" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="644" polyA_stop="658"/>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E339147" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E339147" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56515" e_stop="55876"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCATGGAAGGCAGCAGCAAACAAGGCAATGGGATTGAAGGTGTTTGATAACCCTAAGTTGTTGAAGGAGAGTTTGAAGAAGGATAAGAGAAAGAAAGAGAAGAGTTCTGAGAAGTGGAAGGAAAGAATTCAGACTACGGAGAAGATGAAGAATGAGCGACAGCAGAAGAGAAGGGATAACATTGCTGGCAAAGCCAAGGAGAAGAAGATGAGGAAGATTGCCAAAAGGGAAAAGAAGCTCATGAGGCCGGGCTTTGAGGGGCGAAAGGAAGGCTACATTACTCAGGATAAAAGCTAAACTGGTCATGAACTCTTTCTTATGCCTTCTTACTTTGAATTTAGCTGCTCTCTCATTTGGAGAGAGTTTTGTGTTTGGTCTGAAATCTTTTGCTAATTCTGTGCTAGTCAAGTTTAAGCTTTTTCTATTCAGTAAGTAGTATGTTGGCTAATTAGCCTATCCCAACTGGTTTAGGATTAAGCATTGTTGATTCATAGTAACATGTTAGTTCATGATTTGTTTTCATGAAGTTAGCATTATAATATATGCTTGTCACCCAAATATCATTAGTTTGATTGGAACATATTGTATGCAAACATTTCTCAAACAGCTGTGGAAATGGAACAAATATGAGATTGACT</genome_strand>
        <mrna_strand>AAGCATGGAAGGCAGCAGCAAACAAGGCAATGGGATTGAAGGTGTTTGATAACCCTAAGTTGTTGAAGGAGAGTTTGAAGAAGGATAAGAGAAAGAAAGAGAAGAGTTCTGAGAAGTGGAAGGAAAGAATTCAGACTACGGAGAAGATGAAGAATGAGCGACAGCAGAAGAGAAGGGATAACATTGCTGGCAAAGCCAAGGAGAAGAAGATGAGGAAGATTGCCAAAAGGGAAAAGAAGCTCATGAGGCCGGGCTTTGAGGGGCGAAAGGAAGGCTACATTACTCAGGATAAAAGCTAAACTGGTCATGAACTCTTTCTTATGCCTTCTTACTTTGAATTTAGCTGCTCTCTCATTTGGAGAGAGTTTTGTGTTTGGTCTGAAATCTTTTGCTAATTCTGTGCTAGTCAAGTTTAAGCTTTTTCTATTCAGTAAGTAGTATGTTGGCTAATTAGCCTATCCCAACTGGTTTAGGATTAAGCATTGTTGATTCATAGTAACATGTTAGTTCATGATTTGTTTTCATGAAGTTAGCATTATAATATATGCTTGTCACCCAAATATCATTAGTTTGATTGGAACATATTGTATGCAAACATTTCTCAAACAGCTGTGGAAATGGAACAAATATGAGATTGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E713839" ref_strand="+" ref_description="SGN-E713839 [FB09DB12]">
      <seq>cgatttcggagagaaacaaatttaatcagcgcaagaggagtgaaaaggatgcatctttagagaaatccgatggtaagaagagaaagaggggtgaagacgacaatggagaagatacttcaatggaaaaggacatagagtttgggaaagttaaattaggagacgactatgacaagaaaaagaagaagaagaaagtatccaaacccaaagagttggaaagactgaagaggctggaagaggtgaagagggagaataagacgctggcggataaggaagcatggaaggcagcagcaaacaaggcaatgggattgaaggtgtttgataaccctaagttgttgaaggagagtttgaagaaggataagagaaagaaagagaagagttctgagaagtggaaggaaagaattcagactacggagaagatgaagaatgagcgacagcagaagagaagggataacattgctggcaaagccaaggagaagaagatgaggaagattgccaaaagggaaaagaagctcatgaggccgggctttgaggggcgaaaggaaggctacattactcaggataaaagctaaactggtcatgaactctttcttatgccttcttactttgaatttagctgctctctcatttggagagagttttgtgtttggtctgaaatcttttgctaattctgtgctagtcaagtttaagctttttctattcagtaagtagtatgttggctaattaccctatcccaactggtttaggattaagcattgttgattcatagtaccatgttagttcatgatttgttttcatgaagttacccttataatatatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="57084" stop="55667"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56785" g_stop="55967" g_length="819"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="819" r_length="819" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E713839" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>819</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E713839" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56785" e_stop="55967"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGTTCGGAGAGAAACAAATTTAATCAGCGCAAGAGGAGTGAAAAGGATGCATCTTTAGAGAAATCCGATGGTAAGAAGAGAAAGAGGGGTGAAGACGACAATGGAGAAGATACTTCAATGGAAAAGGACATAGAGTTTGGGAAAGTTAAATTAGGAGACGACTATGACAAGAAAAAGAAGAAGAAGAAAGTATCCAAACCCAAAGAGTTGGAAAGACTGAAGAGGCTGGAAGAGGTGAAGAGGGAGAATAAGACGCTGGCGGATAAGGAAGCATGGAAGGCAGCAGCAAACAAGGCAATGGGATTGAAGGTGTTTGATAACCCTAAGTTGTTGAAGGAGAGTTTGAAGAAGGATAAGAGAAAGAAAGAGAAGAGTTCTGAGAAGTGGAAGGAAAGAATTCAGACTACGGAGAAGATGAAGAATGAGCGACAGCAGAAGAGAAGGGATAACATTGCTGGCAAAGCCAAGGAGAAGAAGATGAGGAAGATTGCCAAAAGGGAAAAGAAGCTCATGAGGCCGGGCTTTGAGGGGCGAAAGGAAGGCTACATTACTCAGGATAAAAGCTAAACTGGTCATGAACTCTTTCTTATGCCTTCTTACTTTGAATTTAGCTGCTCTCTCATTTGGAGAGAGTTTTGTGTTTGGTCTGAAATCTTTTGCTAATTCTGTGCTAGTCAAGTTTAAGCTTTTTCTATTCAGTAAGTAGTATGTTGGCTAATTAGCCTATCCCAACTGGTTTAGGATTAAGCATTGTTGATTCATAGTAACATGTTAGTTCATGATTTGTTTTCATGAAGTTAGCATTATAATATATGCT</genome_strand>
        <mrna_strand>CGATTTCGGAGAGAAACAAATTTAATCAGCGCAAGAGGAGTGAAAAGGATGCATCTTTAGAGAAATCCGATGGTAAGAAGAGAAAGAGGGGTGAAGACGACAATGGAGAAGATACTTCAATGGAAAAGGACATAGAGTTTGGGAAAGTTAAATTAGGAGACGACTATGACAAGAAAAAGAAGAAGAAGAAAGTATCCAAACCCAAAGAGTTGGAAAGACTGAAGAGGCTGGAAGAGGTGAAGAGGGAGAATAAGACGCTGGCGGATAAGGAAGCATGGAAGGCAGCAGCAAACAAGGCAATGGGATTGAAGGTGTTTGATAACCCTAAGTTGTTGAAGGAGAGTTTGAAGAAGGATAAGAGAAAGAAAGAGAAGAGTTCTGAGAAGTGGAAGGAAAGAATTCAGACTACGGAGAAGATGAAGAATGAGCGACAGCAGAAGAGAAGGGATAACATTGCTGGCAAAGCCAAGGAGAAGAAGATGAGGAAGATTGCCAAAAGGGAAAAGAAGCTCATGAGGCCGGGCTTTGAGGGGCGAAAGGAAGGCTACATTACTCAGGATAAAAGCTAAACTGGTCATGAACTCTTTCTTATGCCTTCTTACTTTGAATTTAGCTGCTCTCTCATTTGGAGAGAGTTTTGTGTTTGGTCTGAAATCTTTTGCTAATTCTGTGCTAGTCAAGTTTAAGCTTTTTCTATTCAGTAAGTAGTATGTTGGCTAATTACCCTATCCCAACTGGTTTAGGATTAAGCATTGTTGATTCATAGTACCATGTTAGTTCATGATTTGTTTTCATGAAGTTACCCTTATAATATATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E370587" ref_strand="+" ref_description="SGN-E370587 [TUS-27-K24](-)">
      <seq>aaaggacatagagtttgggaaagttaaattaggagacgactatgacaagaaaaagaagaagaagaaagtatccaaacccaaagagttggaaagactgaagaggctggaagaggtgaagagggagaataagacgctggcggataaggaagcatggaaggcagcagcaaacaaggcaatgggattgaaggtgtttgataaccctaagttgttgaaggagagtttgaagaaggataagagaaagaaagagaagagttctgagaagtggaaggaaagaattcagactacggagaagatgaagaatgagcgacagcagaagagaagggataacattgctggcaaagccaaggagaagaagatgaggaagattgccaaaagggaaaagaagctcatgaggccgggctttgaggggcgaaaggaaggctacattactcaggataaaagctaaactggtcatgaactctttcttatgccttcttactttgaatttagctgctctctcatttggagagagttttgtgtttggtctgaaatcttttgctaattctgtgctagtcaagtttaagctttttctattcagtaagtagtatgttggctaattagcctatcccaactggtttaggattaagcattgttgattcatagtaacatgttagttcatgatttgttttcatgaagttagcattataataaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="56961" stop="55671"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56661" g_stop="55974" g_length="688"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="688" r_length="688" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="689" polyA_stop="698"/>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E370587" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>688</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E370587" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56661" e_stop="55974"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGGACATAGAGTTTGGGAAAGTTAAATTAGGAGACGACTATGACAAGAAAAAGAAGAAGAAGAAAGTATCCAAACCCAAAGAGTTGGAAAGACTGAAGAGGCTGGAAGAGGTGAAGAGGGAGAATAAGACGCTGGCGGATAAGGAAGCATGGAAGGCAGCAGCAAACAAGGCAATGGGATTGAAGGTGTTTGATAACCCTAAGTTGTTGAAGGAGAGTTTGAAGAAGGATAAGAGAAAGAAAGAGAAGAGTTCTGAGAAGTGGAAGGAAAGAATTCAGACTACGGAGAAGATGAAGAATGAGCGACAGCAGAAGAGAAGGGATAACATTGCTGGCAAAGCCAAGGAGAAGAAGATGAGGAAGATTGCCAAAAGGGAAAAGAAGCTCATGAGGCCGGGCTTTGAGGGGCGAAAGGAAGGCTACATTACTCAGGATAAAAGCTAAACTGGTCATGAACTCTTTCTTATGCCTTCTTACTTTGAATTTAGCTGCTCTCTCATTTGGAGAGAGTTTTGTGTTTGGTCTGAAATCTTTTGCTAATTCTGTGCTAGTCAAGTTTAAGCTTTTTCTATTCAGTAAGTAGTATGTTGGCTAATTAGCCTATCCCAACTGGTTTAGGATTAAGCATTGTTGATTCATAGTAACATGTTAGTTCATGATTTGTTTTCATGAAGTTAGCATTATAAT</genome_strand>
        <mrna_strand>AAAGGACATAGAGTTTGGGAAAGTTAAATTAGGAGACGACTATGACAAGAAAAAGAAGAAGAAGAAAGTATCCAAACCCAAAGAGTTGGAAAGACTGAAGAGGCTGGAAGAGGTGAAGAGGGAGAATAAGACGCTGGCGGATAAGGAAGCATGGAAGGCAGCAGCAAACAAGGCAATGGGATTGAAGGTGTTTGATAACCCTAAGTTGTTGAAGGAGAGTTTGAAGAAGGATAAGAGAAAGAAAGAGAAGAGTTCTGAGAAGTGGAAGGAAAGAATTCAGACTACGGAGAAGATGAAGAATGAGCGACAGCAGAAGAGAAGGGATAACATTGCTGGCAAAGCCAAGGAGAAGAAGATGAGGAAGATTGCCAAAAGGGAAAAGAAGCTCATGAGGCCGGGCTTTGAGGGGCGAAAGGAAGGCTACATTACTCAGGATAAAAGCTAAACTGGTCATGAACTCTTTCTTATGCCTTCTTACTTTGAATTTAGCTGCTCTCTCATTTGGAGAGAGTTTTGTGTTTGGTCTGAAATCTTTTGCTAATTCTGTGCTAGTCAAGTTTAAGCTTTTTCTATTCAGTAAGTAGTATGTTGGCTAATTAGCCTATCCCAACTGGTTTAGGATTAAGCATTGTTGATTCATAGTAACATGTTAGTTCATGATTTGTTTTCATGAAGTTAGCATTATAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E326198" ref_strand="+" ref_description="SGN-E326198 [cTOC-16-D19]">
      <seq>agtatccaaacccaaagatttggaaagactgaagaggctggtttacccgaagagggagaataagacgctggcggataaggaagcatggaaggcagcagcaaacaaggcaatgggattgaaggtgtttgataaccctaagttgttgaaggagagtttgaagaaggataagagaaagaaagagaagagttctgagaagtggaaggaaagaattcagactacggagaagatgaagaatgagcgacagcagaagagaagggataacattgctggcaaagccaaggagaagaagatgaggaagattgccaaaagggaaaagaagctcatgaggccgggctttgaggggcgaaaggaaggctacattactcaggataaaagctaaactggtcatgaactctttcttatgccttcttactttgaatttagctgctctctcatttggagagagttttgtgtttggtctgaaatcttttgctaattctgtgctagtcaagtttaagctttttctattcagtaagtagtatgttggctaattagcctatcccaactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="56895" stop="55749"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56595" g_stop="56049" g_length="547"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="547" r_length="547" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E326198" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E326198" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56595" e_stop="56049"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTATCCAAACCCAAAGAGTTGGAAAGACTGAAGAGGCTGGAAGAGGTGAAGAGGGAGAATAAGACGCTGGCGGATAAGGAAGCATGGAAGGCAGCAGCAAACAAGGCAATGGGATTGAAGGTGTTTGATAACCCTAAGTTGTTGAAGGAGAGTTTGAAGAAGGATAAGAGAAAGAAAGAGAAGAGTTCTGAGAAGTGGAAGGAAAGAATTCAGACTACGGAGAAGATGAAGAATGAGCGACAGCAGAAGAGAAGGGATAACATTGCTGGCAAAGCCAAGGAGAAGAAGATGAGGAAGATTGCCAAAAGGGAAAAGAAGCTCATGAGGCCGGGCTTTGAGGGGCGAAAGGAAGGCTACATTACTCAGGATAAAAGCTAAACTGGTCATGAACTCTTTCTTATGCCTTCTTACTTTGAATTTAGCTGCTCTCTCATTTGGAGAGAGTTTTGTGTTTGGTCTGAAATCTTTTGCTAATTCTGTGCTAGTCAAGTTTAAGCTTTTTCTATTCAGTAAGTAGTATGTTGGCTAATTAGCCTATCCCAACTG</genome_strand>
        <mrna_strand>AGTATCCAAACCCAAAGATTTGGAAAGACTGAAGAGGCTGGTTTACCCGAAGAGGGAGAATAAGACGCTGGCGGATAAGGAAGCATGGAAGGCAGCAGCAAACAAGGCAATGGGATTGAAGGTGTTTGATAACCCTAAGTTGTTGAAGGAGAGTTTGAAGAAGGATAAGAGAAAGAAAGAGAAGAGTTCTGAGAAGTGGAAGGAAAGAATTCAGACTACGGAGAAGATGAAGAATGAGCGACAGCAGAAGAGAAGGGATAACATTGCTGGCAAAGCCAAGGAGAAGAAGATGAGGAAGATTGCCAAAAGGGAAAAGAAGCTCATGAGGCCGGGCTTTGAGGGGCGAAAGGAAGGCTACATTACTCAGGATAAAAGCTAAACTGGTCATGAACTCTTTCTTATGCCTTCTTACTTTGAATTTAGCTGCTCTCTCATTTGGAGAGAGTTTTGTGTTTGGTCTGAAATCTTTTGCTAATTCTGTGCTAGTCAAGTTTAAGCTTTTTCTATTCAGTAAGTAGTATGTTGGCTAATTAGCCTATCCCAACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E348894" ref_strand="+" ref_description="SGN-E348894 [cTOF-29-E19]">
      <seq>taactactctggtacttacgaaagagttgaggcgtaggctacacagaaaaaatcgaaatgctccgcggtaacccggggtgatggcgagagttcggagagaaacaaatttaatcagcgcaagaggagtgaaaaggatgcatctttagagaaatccgatggtaagaagagaaagaggggtgaagacgacaatggagaagataccttcaatggaaaaggaccatagagtttgggaaagttaaattaggagacgactatgacaagaaaaagaagaagaagaaagtatccaaacccaaagagttggaaagactgaagaggctggaagaggtgaagagggagaataagacgctggcggataaggaagcatggaagggcagcagcaaacaaggcaatgggattgaagggtgtttgataacccctaagttgttgaagggagagtttgaagaagggataagaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="57168" stop="56118"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56868" g_stop="56417" g_length="452"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="462" r_length="462" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E348894" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>452</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E348894" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56868" e_stop="56417"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAACTACTCTGGTACTTACG-AAGAGTTGAGGCGTAGGCTACACAG-AAAAATCGAAATGCTCCGCGGTAA-CCGGGGTGATGGCGAGAGTTCGGAGAGAAACAAATTTAATCAGCGCAAGAGGAGTGAAAAGGATGCATCTTTAGAGAAATCCGATGGTAAGAAGAGAAAGAGGGGTGAAGACGACAATGGAGAAGATA-CTTCAATGGAAAAGGA-CATAGAGTTTGGGAAAGTTAAATTAGGAGACGACTATGACAAGAAAAAGAAGAAGAAGAAAGTATCCAAACCCAAAGAGTTGGAAAGACTGAAGAGGCTGGAAGAGGTGAAGAGGGAGAATAAGACGCTGGCGGATAAGGAAGCATGGAA-GGCAGCAGCAAACAAGGCAATGGGATTGAA-GGTGTTTGATAA-CCCTAAGTTGTTGAA-GGAGAGTTTGAAGAA-GGATAAGAGAAAGAAAG</genome_strand>
        <mrna_strand>TAACTACTCTGGTACTTACGAAAGAGTTGAGGCGTAGGCTACACAGAAAAAATCGAAATGCTCCGCGGTAACCCGGGGTGATGGCGAGAGTTCGGAGAGAAACAAATTTAATCAGCGCAAGAGGAGTGAAAAGGATGCATCTTTAGAGAAATCCGATGGTAAGAAGAGAAAGAGGGGTGAAGACGACAATGGAGAAGATACCTTCAATGGAAAAGGACCATAGAGTTTGGGAAAGTTAAATTAGGAGACGACTATGACAAGAAAAAGAAGAAGAAGAAAGTATCCAAACCCAAAGAGTTGGAAAGACTGAAGAGGCTGGAAGAGGTGAAGAGGGAGAATAAGACGCTGGCGGATAAGGAAGCATGGAAGGGCAGCAGCAAACAAGGCAATGGGATTGAAGGGTGTTTGATAACCCCTAAGTTGTTGAAGGGAGAGTTTGAAGAAGGGATAAGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E729337" ref_strand="+" ref_description="SGN-E729337 [LA20DA06]">
      <seq>gccgcaatgaagaagaaacagaagtccaccaccatctccgccgaagatacggcggacgctaccgccgtaaccgccagcaccacaatagatttgaaagccctaatccgggataacaggctcttcttcgacaagttgattgacttaattcctcctagattctacctccctaaagatgaacccgatacctggtatcgaggccttcccaaagccgccaaagcttcattgaagaaacaatccagggagaatctcaaactcgcccgccgcaaccggcttgaccccgagaagaaagaacagtcctctactgtcggcctcctcgaacaatcccttcagaaaaagcaaaaaactgacgaggaggatgattccggcgaggaggatcatggtgaacctacgcctattaatttggaggaaaacgataaccctaacaacgataactactctggtacttacgaagagttgaggcgtaggctacacagaaaaatcgaaatgctccgcggtaaccggggtgatggcgagagttcggagagaaacaaatttaatcagcgcaagaggagtgaaaaggatgcatctttagagaaatccgatggtaagaagagaaagaggggtgaagacgacaatggagaagatacttcaatggaaaaggacatagagtttgggaaagttaaattaggagacgactatgacaagagaaagaagaagaagaaagtatccaaacccaaagagttggaaagactgaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="57596" stop="56262"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57296" g_stop="56562" g_length="735"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="735" r_length="735" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E729337" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E729337" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57296" e_stop="56562"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCGCAATGAAGAAGAAACAGAAGTCCACCACCATCTCCGCCGAAGATACGGCGGACGCTACCGCCGTAACCGCCAGCACCACAATAGATTTGAAAGCCCTAATCCGGGATAACAGGCTCTTCTTCGACAAGTTGATTGACTTAATTCCTCCTAGATTCTACCTCCCTAAAGATGAACCCGATACCTGGTATCGAGGCCTTCCCAAAGCCGCCAAAGCTTCATTGAAGAAACAATCCAGGGAGAATCTCAAACTCGCCCGCCGCAACCGGCTTGACCCCGAGAAGAAAGAACAGTCCTCTACTGTCGGCCTCCTCGAACAATCCCTTCAGAAAAAGCAAAAAACTGACGAGGAGGATGATTCCGGCGAGGAGGATCATGGTGAACCTACGCCTATTAATTTGGAGGAAAACGATAACCCTAACAACGATAACTACTCTGGTACTTACGAAGAGTTGAGGCGTAGGCTACACAGAAAAATCGAAATGCTCCGCGGTAACCGGGGTGATGGCGAGAGTTCGGAGAGAAACAAATTTAATCAGCGCAAGAGGAGTGAAAAGGATGCATCTTTAGAGAAATCCGATGGTAAGAAGAGAAAGAGGGGTGAAGACGACAATGGAGAAGATACTTCAATGGAAAAGGACATAGAGTTTGGGAAAGTTAAATTAGGAGACGACTATGACAAGAAAAAGAAGAAGAAGAAAGTATCCAAACCCAAAGAGTTGGAAAGACTGAAG</genome_strand>
        <mrna_strand>GCCGCAATGAAGAAGAAACAGAAGTCCACCACCATCTCCGCCGAAGATACGGCGGACGCTACCGCCGTAACCGCCAGCACCACAATAGATTTGAAAGCCCTAATCCGGGATAACAGGCTCTTCTTCGACAAGTTGATTGACTTAATTCCTCCTAGATTCTACCTCCCTAAAGATGAACCCGATACCTGGTATCGAGGCCTTCCCAAAGCCGCCAAAGCTTCATTGAAGAAACAATCCAGGGAGAATCTCAAACTCGCCCGCCGCAACCGGCTTGACCCCGAGAAGAAAGAACAGTCCTCTACTGTCGGCCTCCTCGAACAATCCCTTCAGAAAAAGCAAAAAACTGACGAGGAGGATGATTCCGGCGAGGAGGATCATGGTGAACCTACGCCTATTAATTTGGAGGAAAACGATAACCCTAACAACGATAACTACTCTGGTACTTACGAAGAGTTGAGGCGTAGGCTACACAGAAAAATCGAAATGCTCCGCGGTAACCGGGGTGATGGCGAGAGTTCGGAGAGAAACAAATTTAATCAGCGCAAGAGGAGTGAAAAGGATGCATCTTTAGAGAAATCCGATGGTAAGAAGAGAAAGAGGGGTGAAGACGACAATGGAGAAGATACTTCAATGGAAAAGGACATAGAGTTTGGGAAAGTTAAATTAGGAGACGACTATGACAAGAGAAAGAAGAAGAAGAAAGTATCCAAACCCAAAGAGTTGGAAAGACTGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E219598" ref_strand="+" ref_description="SGN-E219598 [cLEL-11-O10](-)">
      <seq>cttcagaaaaagcaaaaatctgacaaggaggatgattccggcgaggaggatcatggtgaacctacgcctattaatttggaggaaaacgatgaccctaacagcgataactactctggtacttacgaagagttgaggcgtaggctacacagaaaaatcgaaatgctccgcggtaaccggggtgatggcgagagttcggagagaaacaaatttaatcagcgcaagaggagtgaaaaggatgcatctttagagaaatccgatggtaagaagagaaagaggggtgaagacgacaatggagaagatacttcaatggaaaaggacatagagtttgggaaagttaaattaggaggcggtctatgaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="57272" stop="5865"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56972" g_stop="56599" g_length="374"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="375" r_length="375" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E219598" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>374</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E219598" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56972" e_stop="56599"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCAGAAAAAGCAAAAAACTGACGAGGAGGATGATTCCGGCGAGGAGGATCATGGTGAACCTACGCCTATTAATTTGGAGGAAAACGATAACCCTAACAACGATAACTACTCTGGTACTTACGAAGAGTTGAGGCGTAGGCTACACAGAAAAATCGAAATGCTCCGCGGTAACCGGGGTGATGGCGAGAGTTCGGAGAGAAACAAATTTAATCAGCGCAAGAGGAGTGAAAAGGATGCATCTTTAGAGAAATCCGATGGTAAGAAGAGAAAGAGGGGTGAAGACGACAATGGAGAAGATACTTCAATGGAAAAGGACATAGAGTTTGGGAAAGTTAAATTAGGAGAC-GACTATGACAAGAAAAAGAAGAAGAA</genome_strand>
        <mrna_strand>CTTCAGAAAAAGCAAAAATCTGACAAGGAGGATGATTCCGGCGAGGAGGATCATGGTGAACCTACGCCTATTAATTTGGAGGAAAACGATGACCCTAACAGCGATAACTACTCTGGTACTTACGAAGAGTTGAGGCGTAGGCTACACAGAAAAATCGAAATGCTCCGCGGTAACCGGGGTGATGGCGAGAGTTCGGAGAGAAACAAATTTAATCAGCGCAAGAGGAGTGAAAAGGATGCATCTTTAGAGAAATCCGATGGTAAGAAGAGAAAGAGGGGTGAAGACGACAATGGAGAAGATACTTCAATGGAAAAGGACATAGAGTTTGGGAAAGTTAAATTAGGAGGCGGTCTATGAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E370588" ref_strand="+" ref_description="SGN-E370588 [TUS-27-K24]">
      <seq>aagaaacagaagtccaccaccatctccgccgaagatacggcggacgctaccgccgtaaccgccagcaccacaatagatttgaaagccctaatccgggataacaggctcttcttcgacaagttgattgacttaattcctcctagattctacctccctaaagatgaacccgatacctggtatcgaggccttcccaaagccgccaaagcttcattgaagaaacaatccagggagaatctcaaactcgcccgccgcaaccggcttgaccccgagaagaaagaacagtcctctactgtcggcctcctcgaacaatcccttcagaaaaagcaaaaaactgacgaggaggatgattccggcgaggaggatcatggtgaacctacgcctattaatttggaggaaaacgataaccctaacaacgataactactctggtacttacgaagagttgaggcgtaggctacacagaaaaatcgaaatgctccgcggtaaccggggtgatggcgagagttcggagagaaacaaatttaatcagcgcaagaggagtgaaaaggatgcatctttagagaaatccgatggtaagaagagaaagaggggtgaagacgacaatggagaagatacttcaatggaaaaggacatagagtttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="57584" stop="56345"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57284" g_stop="56645" g_length="640"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="640" r_length="640" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E370588" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E370588" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57284" e_stop="56645"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAACAGAAGTCCACCACCATCTCCGCCGAAGATACGGCGGACGCTACCGCCGTAACCGCCAGCACCACAATAGATTTGAAAGCCCTAATCCGGGATAACAGGCTCTTCTTCGACAAGTTGATTGACTTAATTCCTCCTAGATTCTACCTCCCTAAAGATGAACCCGATACCTGGTATCGAGGCCTTCCCAAAGCCGCCAAAGCTTCATTGAAGAAACAATCCAGGGAGAATCTCAAACTCGCCCGCCGCAACCGGCTTGACCCCGAGAAGAAAGAACAGTCCTCTACTGTCGGCCTCCTCGAACAATCCCTTCAGAAAAAGCAAAAAACTGACGAGGAGGATGATTCCGGCGAGGAGGATCATGGTGAACCTACGCCTATTAATTTGGAGGAAAACGATAACCCTAACAACGATAACTACTCTGGTACTTACGAAGAGTTGAGGCGTAGGCTACACAGAAAAATCGAAATGCTCCGCGGTAACCGGGGTGATGGCGAGAGTTCGGAGAGAAACAAATTTAATCAGCGCAAGAGGAGTGAAAAGGATGCATCTTTAGAGAAATCCGATGGTAAGAAGAGAAAGAGGGGTGAAGACGACAATGGAGAAGATACTTCAATGGAAAAGGACATAGAGTTTG</genome_strand>
        <mrna_strand>AAGAAACAGAAGTCCACCACCATCTCCGCCGAAGATACGGCGGACGCTACCGCCGTAACCGCCAGCACCACAATAGATTTGAAAGCCCTAATCCGGGATAACAGGCTCTTCTTCGACAAGTTGATTGACTTAATTCCTCCTAGATTCTACCTCCCTAAAGATGAACCCGATACCTGGTATCGAGGCCTTCCCAAAGCCGCCAAAGCTTCATTGAAGAAACAATCCAGGGAGAATCTCAAACTCGCCCGCCGCAACCGGCTTGACCCCGAGAAGAAAGAACAGTCCTCTACTGTCGGCCTCCTCGAACAATCCCTTCAGAAAAAGCAAAAAACTGACGAGGAGGATGATTCCGGCGAGGAGGATCATGGTGAACCTACGCCTATTAATTTGGAGGAAAACGATAACCCTAACAACGATAACTACTCTGGTACTTACGAAGAGTTGAGGCGTAGGCTACACAGAAAAATCGAAATGCTCCGCGGTAACCGGGGTGATGGCGAGAGTTCGGAGAGAAACAAATTTAATCAGCGCAAGAGGAGTGAAAAGGATGCATCTTTAGAGAAATCCGATGGTAAGAAGAGAAAGAGGGGTGAAGACGACAATGGAGAAGATACTTCAATGGAAAAGGACATAGAGTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E245732" ref_strand="+" ref_description="SGN-E245732 [cLEF-48-K6]">
      <seq>cagcaccacaatagatttgaaagccctaatccgggataacaggctcttcttcgacaagttgattgacttaattcctcctagattctacctccctaaagatgaacccgatacctggtatcgaggccttcccaaagccgccaaagcttcattgaagaaacaatccagggagaatctcaaactcgcccgccgcaaccggcttgaccccgagaagaaagaacagtcctctactgtcggcctcctcgaacaatcccttcagaaaaagcaaaaaactgacgaggaggatgattccggcgaggaggatcatggtgaacctacgcctattaatttggaggaaaacgataaccctaacaacgataactactctggtacttacgaagagttgaggcgtaggctacacagaaaaatcgaaatgctccgcggtaaccggggtgatggcgagagttcggagagaaacaaatttaatcagcgcaagaggagtgaaaaggatgcatctttagagaaatccgatggtaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="57522" stop="56408"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57222" g_stop="56708" g_length="515"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="515" r_length="515" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E245732" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245732" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57222" e_stop="56708"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGCACCACAATAGATTTGAAAGCCCTAATCCGGGATAACAGGCTCTTCTTCGACAAGTTGATTGACTTAATTCCTCCTAGATTCTACCTCCCTAAAGATGAACCCGATACCTGGTATCGAGGCCTTCCCAAAGCCGCCAAAGCTTCATTGAAGAAACAATCCAGGGAGAATCTCAAACTCGCCCGCCGCAACCGGCTTGACCCCGAGAAGAAAGAACAGTCCTCTACTGTCGGCCTCCTCGAACAATCCCTTCAGAAAAAGCAAAAAACTGACGAGGAGGATGATTCCGGCGAGGAGGATCATGGTGAACCTACGCCTATTAATTTGGAGGAAAACGATAACCCTAACAACGATAACTACTCTGGTACTTACGAAGAGTTGAGGCGTAGGCTACACAGAAAAATCGAAATGCTCCGCGGTAACCGGGGTGATGGCGAGAGTTCGGAGAGAAACAAATTTAATCAGCGCAAGAGGAGTGAAAAGGATGCATCTTTAGAGAAATCCGATGGTAAGA</genome_strand>
        <mrna_strand>CAGCACCACAATAGATTTGAAAGCCCTAATCCGGGATAACAGGCTCTTCTTCGACAAGTTGATTGACTTAATTCCTCCTAGATTCTACCTCCCTAAAGATGAACCCGATACCTGGTATCGAGGCCTTCCCAAAGCCGCCAAAGCTTCATTGAAGAAACAATCCAGGGAGAATCTCAAACTCGCCCGCCGCAACCGGCTTGACCCCGAGAAGAAAGAACAGTCCTCTACTGTCGGCCTCCTCGAACAATCCCTTCAGAAAAAGCAAAAAACTGACGAGGAGGATGATTCCGGCGAGGAGGATCATGGTGAACCTACGCCTATTAATTTGGAGGAAAACGATAACCCTAACAACGATAACTACTCTGGTACTTACGAAGAGTTGAGGCGTAGGCTACACAGAAAAATCGAAATGCTCCGCGGTAACCGGGGTGATGGCGAGAGTTCGGAGAGAAACAAATTTAATCAGCGCAAGAGGAGTGAAAAGGATGCATCTTTAGAGAAATCCGATGGTAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E269238" ref_strand="+" ref_description="SGN-E269238 [cLEI-16-L4]">
      <seq>gtcaatccaacctagccgcaatgaagaagaaacagaagtccaccaccatctccgccgaagatacggcggacgctaccgccgtaaccgccagcaccacaatagatttgaaagccctaatccgggataacaggctcttcttcgacaagttgattgacttaattcctcctagattctacctccctaaagatgaacccgatacctggtatcgaggccttcccaaagccgccaaagcttcattgaagaaacaatccagggagaatctcaaactcgcccgccgcaaccggcttgaccccgagaagaaagaacagtcctctactgtcggcctcctcgaacaatcccttcagaaaaagcaaaaaactgacgaggaggatgattccggcgaggaggatcatggtgaacctacgcctattaatttggaggaaaacgataaccctaacaacgataactactctggtacttacgaagagttgaggcgtaggctacacagaaaaatcgaaatgctccgcggtaaccggggtgatggcgagagttcggagagaaacaaatttaatcagcgcaagaggagtgaaaaggatgcatctttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="57610" stop="56426"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57310" g_stop="56726" g_length="585"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="585" r_length="585" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E269238" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E269238" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57310" e_stop="56726"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAATCCAACCTAGCCGCAATGAAGAAGAAACAGAAGTCCACCACCATCTCCGCCGAAGATACGGCGGACGCTACCGCCGTAACCGCCAGCACCACAATAGATTTGAAAGCCCTAATCCGGGATAACAGGCTCTTCTTCGACAAGTTGATTGACTTAATTCCTCCTAGATTCTACCTCCCTAAAGATGAACCCGATACCTGGTATCGAGGCCTTCCCAAAGCCGCCAAAGCTTCATTGAAGAAACAATCCAGGGAGAATCTCAAACTCGCCCGCCGCAACCGGCTTGACCCCGAGAAGAAAGAACAGTCCTCTACTGTCGGCCTCCTCGAACAATCCCTTCAGAAAAAGCAAAAAACTGACGAGGAGGATGATTCCGGCGAGGAGGATCATGGTGAACCTACGCCTATTAATTTGGAGGAAAACGATAACCCTAACAACGATAACTACTCTGGTACTTACGAAGAGTTGAGGCGTAGGCTACACAGAAAAATCGAAATGCTCCGCGGTAACCGGGGTGATGGCGAGAGTTCGGAGAGAAACAAATTTAATCAGCGCAAGAGGAGTGAAAAGGATGCATCTTTAG</genome_strand>
        <mrna_strand>GTCAATCCAACCTAGCCGCAATGAAGAAGAAACAGAAGTCCACCACCATCTCCGCCGAAGATACGGCGGACGCTACCGCCGTAACCGCCAGCACCACAATAGATTTGAAAGCCCTAATCCGGGATAACAGGCTCTTCTTCGACAAGTTGATTGACTTAATTCCTCCTAGATTCTACCTCCCTAAAGATGAACCCGATACCTGGTATCGAGGCCTTCCCAAAGCCGCCAAAGCTTCATTGAAGAAACAATCCAGGGAGAATCTCAAACTCGCCCGCCGCAACCGGCTTGACCCCGAGAAGAAAGAACAGTCCTCTACTGTCGGCCTCCTCGAACAATCCCTTCAGAAAAAGCAAAAAACTGACGAGGAGGATGATTCCGGCGAGGAGGATCATGGTGAACCTACGCCTATTAATTTGGAGGAAAACGATAACCCTAACAACGATAACTACTCTGGTACTTACGAAGAGTTGAGGCGTAGGCTACACAGAAAAATCGAAATGCTCCGCGGTAACCGGGGTGATGGCGAGAGTTCGGAGAGAAACAAATTTAATCAGCGCAAGAGGAGTGAAAAGGATGCATCTTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E244397" ref_strand="+" ref_description="SGN-E244397 [cLEF-3-N13]">
      <seq>attgtcaatccaacctagccggaatgaagaagaaacagaagtccaccaccatctgcgccgaagatacgggggacgctaccgccgtaaccgccagcaccacaatagatttgaaagccctaatccgggataacaggctcttcttcgacaagttgattgacttaattcctcctagattctacctccctaaagatgaacccgatacctggtatcgaggcctttccaaagtcgtcaaagctttattgaagaaacaatccagggagaatgtcaaactcgcccgccgcaaccggcttgaccccgagaagaaagaacagtcctctactgtcggactgctctaacaatcccttcagaaaaagcaaaaaactgacgaggaggatgattccggcgaggaggatcatggtgaacctacgcctattaatttggaggaaaacgataaccctaacaacgataactactctggtacttacgaagagttgaggcgtatgctacacagaaaaatcgaaatgctccgcggtaaccggggtgatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="57613" stop="56488"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57313" g_stop="56788" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E244397" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244397" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57313" e_stop="56788"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGTCAATCCAACCTAGCCGCAATGAAGAAGAAACAGAAGTCCACCACCATCTCCGCCGAAGATACGGCGGACGCTACCGCCGTAACCGCCAGCACCACAATAGATTTGAAAGCCCTAATCCGGGATAACAGGCTCTTCTTCGACAAGTTGATTGACTTAATTCCTCCTAGATTCTACCTCCCTAAAGATGAACCCGATACCTGGTATCGAGGCCTTCCCAAAGCCGCCAAAGCTTCATTGAAGAAACAATCCAGGGAGAATCTCAAACTCGCCCGCCGCAACCGGCTTGACCCCGAGAAGAAAGAACAGTCCTCTACTGTCGGCCTCCTCGAACAATCCCTTCAGAAAAAGCAAAAAACTGACGAGGAGGATGATTCCGGCGAGGAGGATCATGGTGAACCTACGCCTATTAATTTGGAGGAAAACGATAACCCTAACAACGATAACTACTCTGGTACTTACGAAGAGTTGAGGCGTAGGCTACACAGAAAAATCGAAATGCTCCGCGGTAACCGGGGTGATGG</genome_strand>
        <mrna_strand>ATTGTCAATCCAACCTAGCCGGAATGAAGAAGAAACAGAAGTCCACCACCATCTGCGCCGAAGATACGGGGGACGCTACCGCCGTAACCGCCAGCACCACAATAGATTTGAAAGCCCTAATCCGGGATAACAGGCTCTTCTTCGACAAGTTGATTGACTTAATTCCTCCTAGATTCTACCTCCCTAAAGATGAACCCGATACCTGGTATCGAGGCCTTTCCAAAGTCGTCAAAGCTTTATTGAAGAAACAATCCAGGGAGAATGTCAAACTCGCCCGCCGCAACCGGCTTGACCCCGAGAAGAAAGAACAGTCCTCTACTGTCGGACTGCTCTAACAATCCCTTCAGAAAAAGCAAAAAACTGACGAGGAGGATGATTCCGGCGAGGAGGATCATGGTGAACCTACGCCTATTAATTTGGAGGAAAACGATAACCCTAACAACGATAACTACTCTGGTACTTACGAAGAGTTGAGGCGTATGCTACACAGAAAAATCGAAATGCTCCGCGGTAACCGGGGTGATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E271275" ref_strand="+" ref_description="SGN-E271275 [cLEM-5-F23]">
      <seq>aagaaacagaagtccaccaccatctccgccgaagataccggcggacgctaccgccgtaaccgccagcaccacaatagatttgaaagccctaatccgggataacaggctcttcttcgacaagttgattgacttaattcctcctagattctacctccctaaagatgaacccgatacctggtatcgaggccttcccaaagccgccaaagcttcattgaagaaacaatccagggagaatctcaaactcgcccgccgcaaccggcttgaccccgagaagaaagaacagtcctctactgtcggcctcctcgaacaatcccttcagaaaaagcaaaaaactgacgaggaggatgattccggcgaggaggatcatggtgaacctacgcctattaatttggaggaaaacgataaccctaacaacgataactactctggtactta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="57584" stop="56551"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57284" g_stop="56851" g_length="434"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="435" r_length="435" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E271275" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>434</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E271275" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57284" e_stop="56851"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAACAGAAGTCCACCACCATCTCCGCCGAAGATA-CGGCGGACGCTACCGCCGTAACCGCCAGCACCACAATAGATTTGAAAGCCCTAATCCGGGATAACAGGCTCTTCTTCGACAAGTTGATTGACTTAATTCCTCCTAGATTCTACCTCCCTAAAGATGAACCCGATACCTGGTATCGAGGCCTTCCCAAAGCCGCCAAAGCTTCATTGAAGAAACAATCCAGGGAGAATCTCAAACTCGCCCGCCGCAACCGGCTTGACCCCGAGAAGAAAGAACAGTCCTCTACTGTCGGCCTCCTCGAACAATCCCTTCAGAAAAAGCAAAAAACTGACGAGGAGGATGATTCCGGCGAGGAGGATCATGGTGAACCTACGCCTATTAATTTGGAGGAAAACGATAACCCTAACAACGATAACTACTCTGGTACTTA</genome_strand>
        <mrna_strand>AAGAAACAGAAGTCCACCACCATCTCCGCCGAAGATACCGGCGGACGCTACCGCCGTAACCGCCAGCACCACAATAGATTTGAAAGCCCTAATCCGGGATAACAGGCTCTTCTTCGACAAGTTGATTGACTTAATTCCTCCTAGATTCTACCTCCCTAAAGATGAACCCGATACCTGGTATCGAGGCCTTCCCAAAGCCGCCAAAGCTTCATTGAAGAAACAATCCAGGGAGAATCTCAAACTCGCCCGCCGCAACCGGCTTGACCCCGAGAAGAAAGAACAGTCCTCTACTGTCGGCCTCCTCGAACAATCCCTTCAGAAAAAGCAAAAAACTGACGAGGAGGATGATTCCGGCGAGGAGGATCATGGTGAACCTACGCCTATTAATTTGGAGGAAAACGATAACCCTAACAACGATAACTACTCTGGTACTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E724921" ref_strand="+" ref_description="SGN-E724921 [FC25CB09]">
      <seq>ggcagatttcagcccctagagagaaagagagagagagaatactggaaagaagcagtaggcattgtaaagaagaaacatctagatatactctagaataactaaaaccctgttttctctttccttttttcttcttcttcttctctctctctactgttccgtcgtctgctcatttttatctttcagtatgagtaaggagaaagaacggaggatgttcgttggtgttgtttgaaattgtgctgctgagcttaagcttcttcttactgctcttctttttctctgttctcttattacacttcttcactttatcccttctcgtttaataactttctcccctgtaaatcttggcagctgtatttctactcccatcgccccacttcactctgtttcccacttaaacgctacaaattcatcaaccccatctgctaatacgagtactactactccaccgccggcaccggagtcgccgtctttggagaaagacatactgttacaaaacggtgtcgttaagaaagctttcaaccctttcggctccgccgcatacaactttattcagatgtctgcttataaaggaggttataacccttttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="62808" stop="63978"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63091" g_stop="63678" g_length="588"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="588" r_length="588" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E724921" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>588</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E724921" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63091" e_stop="63678"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAGATTTCAGTATAGAGAGAGAAAGAGAGAGAGAGAATACTGGAAAGAAGCAGTAGGCATTGTAAAGAAGAAACATCTAGATATACTCTAGAATAACTAAAACCCTGTTTTCTCTTTCCTTTTTTCTTCTTCTTCTTCTCTCTCTCTACTGTTCCGTCGTCTGCTCATTTTTATCTTTCAGTATGAGTAAGGAGAAAGAACGGAGGATGTTCGTTGGTGTTGTTTGGAATTGTGCTGCTGAGCTTAAGCTTCTTCTTACTGCTCTTCTTTTTCTCTGTTCTCTTATTACACTTCTTCACTTTATCCCTTCTCGTTTAATAACTTTCTCCCCTGTAGATCTTGGCAGCTGTATTTCTACTCCCATCGCCCCACTTCACTCTGTTTCCCACTTAAACGCTACGAATTCATCAACCCCATCTGCTAATACGAGTACTACTACTCCACCGCCGGCACCGGAGTCGCCGTCGTTGGAGAAAGACAGACTGTTACAAAACGGTGTCGTTAAGAGAGCTTTCAACCCTTTCGGCTCCGCCGCATACAACTTTATTCTGATGTCTGCTTATAGAGGAGGTTATAACACTTTTGC</genome_strand>
        <mrna_strand>GGCAGATTTCAGCCCCTAGAGAGAAAGAGAGAGAGAGAATACTGGAAAGAAGCAGTAGGCATTGTAAAGAAGAAACATCTAGATATACTCTAGAATAACTAAAACCCTGTTTTCTCTTTCCTTTTTTCTTCTTCTTCTTCTCTCTCTCTACTGTTCCGTCGTCTGCTCATTTTTATCTTTCAGTATGAGTAAGGAGAAAGAACGGAGGATGTTCGTTGGTGTTGTTTGAAATTGTGCTGCTGAGCTTAAGCTTCTTCTTACTGCTCTTCTTTTTCTCTGTTCTCTTATTACACTTCTTCACTTTATCCCTTCTCGTTTAATAACTTTCTCCCCTGTAAATCTTGGCAGCTGTATTTCTACTCCCATCGCCCCACTTCACTCTGTTTCCCACTTAAACGCTACAAATTCATCAACCCCATCTGCTAATACGAGTACTACTACTCCACCGCCGGCACCGGAGTCGCCGTCTTTGGAGAAAGACATACTGTTACAAAACGGTGTCGTTAAGAAAGCTTTCAACCCTTTCGGCTCCGCCGCATACAACTTTATTCAGATGTCTGCTTATAAAGGAGGTTATAACCCTTTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E745808" ref_strand="+" ref_description="SGN-E745808 [GI|47105062]">
      <seq>gagtatagagagagaaagagagagagagaatactggaaagaagcagtaggcattgtaaagaagaaacatctagatatactctagaataactaaaaccctgttttctctttccttttttcttcttcttcttctctctctctactgttccgtcgtctgctcatttttatctttcagtatgagtaaggagaaagaacggaggatgttcgttggtgttgtttggaattgtgctgctgagcttaagcttcttcttactgctcttctttttctctgttctcttattacacttcttcactttatcccttctcgtttaataactttctcccctgtagatcttggcagctgtatttctactcccatcgccccacttcactctgtttcccacttaaacgctacgaattcatcaaccccatctgctaatacgagtactactactccaccgccggcaccggagtcgccgtcgttggagaaagacagactgttacaaaacggtgtcgttaagagagctttcaaccctttcggctccgccgcatacaactttattctgatgtctgcttatagaggaggttataacacttttgctgtaatgggtttaggttcaaagcctcttcacgtctacggcaaacccagttaccgttgtgagtgggtttcttctgataaacagaaaacccccatctccgttgttggtcataagatcctcccggactggggttatggcagggtttatactgtgatagtcataaattgcactttccctgtaccagttggcaacggcgaaaatggcggaaaacttctcgttcacgccaccaccaacggcggcggcgacactaactttaacaccaccgacactttcgaggcattgtcggaaacgggaaaggatttcgtcaacttcacttccgtatatgaagctcccccaaagtatgatttcttctactgcgggtcatctctatacgggaacttgagcccacagagagtaagagagtggctggcatttcacgttaggctgttcggagagaagtcccatttcgtaattcacgatgctggaggtgtacatgagggggtaatggaggtgcttaagccatggatggagaaaggatacgttacattacaggatattagggaccaagagagatttgatgggtactatcataatcagttccttattgtcaatgattgcttacacagatataagtttcaagctaaatggatgttcttctttgatgtggatgagtacatttatgtaccaaagaagagcaccattaaatctgttgtgaattccttatcggattatacacaattcaccattgaacagatgccaatgtctaacaagctctgtctcgaagaggaccgcggtaaatcctatagaaaatgggggtttgagaagctagtgtacaaggacgtgaagacaggtattaggagggatcgaaaatatgcagtacaacctcgcaatgtgatcgccaacggtgtgcatatgtctcagaatacagtaggcaagacaacacacaagacagaaggacgtatcaaatacttccactatcacgggaccatcgcggagcaccgtgaaccatgccggcagctggtcaacaccacagccatcaccgttgacggtatcccttataatgttgacactacaatgagagatgttgctgcaactgttaagagattcgaacttaagatgattggcactacattacaaagaacgcggcaatgaggtcaacattgtcttgtactttgttttcaacatgtgttattacttttaagtttcttttggttagagctatatatattcttcttctcttgttcatttctgtatgataaaatttttcttatactttttggaatagaagcatgggtggtatagaaacagcagtgacaagcatattagtatatgattcgtttatttatatatttgtaggattacagggtgttttgtactgttgtctttgtttataacactatttaattcgctttattttgccaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="62801" stop="66271"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63100" g_stop="64461" g_length="1362"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1362" r_length="1362" r_score="0.999"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64462" i_stop="65352" i_length="891">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65353" g_stop="65971" g_length="619"/>
          <reference_exon_boundary r_type="cDNA" r_start="1363" r_stop="1981" r_length="619" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65972" i_stop="66047" i_length="76">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66048" g_stop="66058" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="1982" r_stop="1992" r_length="11" r_score="0.818"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E745808" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1992</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E745808" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63100" e_stop="64461"/>
          <exon e_start="65353" e_stop="65971"/>
          <exon e_start="66048" e_stop="66058"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTATAGAGAGAGAAAGAGAGAGAGAGAATACTGGAAAGAAGCAGTAGGCATTGTAAAGAAGAAACATCTAGATATACTCTAGAATAACTAAAACCCTGTTTTCTCTTTCCTTTTTTCTTCTTCTTCTTCTCTCTCTCTACTGTTCCGTCGTCTGCTCATTTTTATCTTTCAGTATGAGTAAGGAGAAAGAACGGAGGATGTTCGTTGGTGTTGTTTGGAATTGTGCTGCTGAGCTTAAGCTTCTTCTTACTGCTCTTCTTTTTCTCTGTTCTCTTATTACACTTCTTCACTTTATCCCTTCTCGTTTAATAACTTTCTCCCCTGTAGATCTTGGCAGCTGTATTTCTACTCCCATCGCCCCACTTCACTCTGTTTCCCACTTAAACGCTACGAATTCATCAACCCCATCTGCTAATACGAGTACTACTACTCCACCGCCGGCACCGGAGTCGCCGTCGTTGGAGAAAGACAGACTGTTACAAAACGGTGTCGTTAAGAGAGCTTTCAACCCTTTCGGCTCCGCCGCATACAACTTTATTCTGATGTCTGCTTATAGAGGAGGTTATAACACTTTTGCTGTAATGGGTTTAGGTTCAAAGCCTCTTCACGTCTACGGCAAACCCAGTTACCGTTGTGAGTGGGTTTCTTCTGATAAACAGAAAACCCCCATCTCCGTTGTTGGTCATAAGATCCTCCCGGACTGGGGTTATGGCAGGGTTTATACTGTGATAGTCATAAATTGCACTTTCCCTGTACCAGTTGGCAACGGCGAAAATGGCGGAAAACTTCTCGTTCACGCCACCACCAACGGCGGCGGCGACACTAACTTTAACACCACCGACACTTTCGAGGCATTGTCGGAAACGGGAAAGGATTTCGTCAACTTCACTTCCGTATATGAAGCTCCCCCAAAGTATGATTTCTTCTACTGCGGGTCATCTCTATACGGGAACTTGAGCCCACAGAGAGTAAGAGAGTGGCTGGCATTTCACGTTAGGCTGTTCGGAGAGAAGTCCCATTTCGTAATTCACGATGCTGGAGGTGTACATGAGGGGGTAATGGAGGTGCTTAAGCCATGGATGGAGAAAGGATACGTTACATTACAGGATATTAGGGACCAAGAGAGATTTGATGGGTACTATCATAATCAGTTCCTTATTGTCAATGATTGCTTACACAGATATAAGTTTCAAGCTAAATGGATGTTCTTCTTTGATGTGGATGAGTACATTTATGTACCAAAGAAGAGCACCATTAAATCTGTTGTGAATTCCTTATCGGATTATACACAATTCACCATTGAACAGATGCCAATGTCTAACAAGCTCTGTCTCGAAGAGGACCGCGGTAAATCCTATAGGTAACTTTTCCAGACACCCATTCACCTTGTGAATTTCTTAGTTTAGTTCAATTTGGCATTTACTTATGCATTTATTGGTCAACATGTTTCTCACCAAACATTCAAGATGCTGAATTTCGATTGACCCGTGTTGGTATTTTTAATTGAAATAAAGAATTTTGCTACTTAAACTAAATCAACCATCCCAATTTGGATAAATTTGTTTAGTATCAAGACAATATATTAATGTTGATTGTTGTTCCTCTAAACATGAGGTCTTTCTCTGTTACAGAGCATATAGTTAGATATTCTGGTAATATTTTGTTGATTTGTTGATGTCTTGTAGTGGTAGATAATTGAGATGCTTTGATGGGTTATTAGACTGTTCACGAGTAAAGGAATTCTTGATTGCTACTTTAGTTTGGTGATTAGTCTTGTGATCTTGGCTTAAAAATTTGATTAATGCCTTATTTTGTATTTGCTCTAGTGGAAGCTTAGCTGTCTTAATTTGTCAATATTCTAATTACCTTAATGAGACCTGTATTAGCTGGATCAAATGTTTTTTCCATGGTGTTTGGAATGGAACCTCGACCAAATTAGCTGTCCTGAAAAAATTTAGATACTTAATGCTCATCACCAATTAAAGTTGTGTTTTTTAATATTTAGTTGTCATTACCTAGTTGTAACTGCGCGTTCTTTTAGTGAGTAAAAATTGTATCTTTGAATAATTGAATCCACTATTCGTATATGGTATGCTTGATTTTGATAGACCAGAAGACTGGATAAAAGAAAACGATTTGTGGGTTTTTACGAGTCGTTTTCAACTAAAAATCGTCTTTGCTTAATATATTTTGGATGAAGTTATGTGTTCAAACACTTAAAACTGATGATTCAATGCTAATTTGGCTACAGAAAATGGGGGTTTGAGAAGCTAGTGTACAAGGACGTGAAGACAGGTATTAGGAGGGATCGAAAATATGCAGTACAACCTCGCAATGTGATCGCCAACGGTGTGCATATGTCTCAGAATACAGTAGGCAAGACAACACACAAGACAGAAGGACGTATCAAATACTTCCACTATCACGGGACCATCGCGGAGCACCGTGAACCATGCCGGCAGCTGGTCAACACCACAGCCATCACCGTTGACGGTATCCCTTATAATGTTGACACTACAATGAGAGATGTTGCTGCAACTGTTAAGAGATTCGAACTTAAGATGATTGGCACTACATTACAAAGAACGCGGCAATGAGGTCAACATTGTCTTGTACTTTGTTTTCAACATGTGTTATTACTTTTAAGTTTCTTTTGGTTAGAGCTATATATATTCTTCTTCTCTTGTTCATTTCTGTATGATAAAATTTTTCTTATACTTTTTGGAATAGAAGCATGGGTGGTATAGAAACAGCAGTGACAAGCATATTAGTATATGATTCGTTTATTTATATATTTGTAGGATTACAGGGTGTTTTGTACTGTTGTCTTTGTTTATAACACTATTTAATTCGCTTTATTTTGCCAAAAAGTTGGCTGGATTTGATTATGATTGTCGGTGTCAAGGGGGGCCTCCCACCTCTTATCAACACACAACTGGCATGTAGAAAAAATATAA</genome_strand>
        <mrna_strand>GAGTATAGAGAGAGAAAGAGAGAGAGAGAATACTGGAAAGAAGCAGTAGGCATTGTAAAGAAGAAACATCTAGATATACTCTAGAATAACTAAAACCCTGTTTTCTCTTTCCTTTTTTCTTCTTCTTCTTCTCTCTCTCTACTGTTCCGTCGTCTGCTCATTTTTATCTTTCAGTATGAGTAAGGAGAAAGAACGGAGGATGTTCGTTGGTGTTGTTTGGAATTGTGCTGCTGAGCTTAAGCTTCTTCTTACTGCTCTTCTTTTTCTCTGTTCTCTTATTACACTTCTTCACTTTATCCCTTCTCGTTTAATAACTTTCTCCCCTGTAGATCTTGGCAGCTGTATTTCTACTCCCATCGCCCCACTTCACTCTGTTTCCCACTTAAACGCTACGAATTCATCAACCCCATCTGCTAATACGAGTACTACTACTCCACCGCCGGCACCGGAGTCGCCGTCGTTGGAGAAAGACAGACTGTTACAAAACGGTGTCGTTAAGAGAGCTTTCAACCCTTTCGGCTCCGCCGCATACAACTTTATTCTGATGTCTGCTTATAGAGGAGGTTATAACACTTTTGCTGTAATGGGTTTAGGTTCAAAGCCTCTTCACGTCTACGGCAAACCCAGTTACCGTTGTGAGTGGGTTTCTTCTGATAAACAGAAAACCCCCATCTCCGTTGTTGGTCATAAGATCCTCCCGGACTGGGGTTATGGCAGGGTTTATACTGTGATAGTCATAAATTGCACTTTCCCTGTACCAGTTGGCAACGGCGAAAATGGCGGAAAACTTCTCGTTCACGCCACCACCAACGGCGGCGGCGACACTAACTTTAACACCACCGACACTTTCGAGGCATTGTCGGAAACGGGAAAGGATTTCGTCAACTTCACTTCCGTATATGAAGCTCCCCCAAAGTATGATTTCTTCTACTGCGGGTCATCTCTATACGGGAACTTGAGCCCACAGAGAGTAAGAGAGTGGCTGGCATTTCACGTTAGGCTGTTCGGAGAGAAGTCCCATTTCGTAATTCACGATGCTGGAGGTGTACATGAGGGGGTAATGGAGGTGCTTAAGCCATGGATGGAGAAAGGATACGTTACATTACAGGATATTAGGGACCAAGAGAGATTTGATGGGTACTATCATAATCAGTTCCTTATTGTCAATGATTGCTTACACAGATATAAGTTTCAAGCTAAATGGATGTTCTTCTTTGATGTGGATGAGTACATTTATGTACCAAAGAAGAGCACCATTAAATCTGTTGTGAATTCCTTATCGGATTATACACAATTCACCATTGAACAGATGCCAATGTCTAACAAGCTCTGTCTCGAAGAGGACCGCGGTAAATCCTATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGGGGGTTTGAGAAGCTAGTGTACAAGGACGTGAAGACAGGTATTAGGAGGGATCGAAAATATGCAGTACAACCTCGCAATGTGATCGCCAACGGTGTGCATATGTCTCAGAATACAGTAGGCAAGACAACACACAAGACAGAAGGACGTATCAAATACTTCCACTATCACGGGACCATCGCGGAGCACCGTGAACCATGCCGGCAGCTGGTCAACACCACAGCCATCACCGTTGACGGTATCCCTTATAATGTTGACACTACAATGAGAGATGTTGCTGCAACTGTTAAGAGATTCGAACTTAAGATGATTGGCACTACATTACAAAGAACGCGGCAATGAGGTCAACATTGTCTTGTACTTTGTTTTCAACATGTGTTATTACTTTTAAGTTTCTTTTGGTTAGAGCTATATATATTCTTCTTCTCTTGTTCATTTCTGTATGATAAAATTTTTCTTATACTTTTTGGAATAGAAGCATGGGTGGTATAGAAACAGCAGTGACAAGCATATTAGTATATGATTCGTTTATTTATATATTTGTAGGATTACAGGGTGTTTTGTACTGTTGTCTTTGTTTATAACACTATTTAATTCGCTTTATTTTGCCAAAAA............................................................................AAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E367187" ref_strand="+" ref_description="SGN-E367187 [cLPT-5-A9]">
      <seq>aaagagagagagagagaatactggaaagaagcagtagcattgtaaagaagaaacatctagatatactctagaataactaaaagcctgttttctctttccttttttcttcttcttcttcttcttcttatctctctctctactgttctgtcgtctgctcatttttatctttcagtatgagtaaggagaaagaacggaggatgttcgttggtgttgtttggaattgtgctgctgagcttaagcttcttcttactgctcttctttttctctgttctcttattacacttcttcactttatcccttctcgtttaatcactttctcccctgtagatcttggcagctgtatttctactcccaccgccccacttcactttgtttcccacttaaacgctactaattcatcaaccccatctgctaatacgagtactactactccaccgccggcaccggagccgccgtcgttggagaaagacagactgttactaaacggcgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="62897" stop="63892"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63112" g_stop="63592" g_length="481"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="491" r_length="491" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E367187" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E367187" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63112" e_stop="63592"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAGAGAGAGAGAGAATACTGGAAAGAAGCAGTAGGCATTGTAAAGAAGAAACATCTAGATATACTCTAGAATAACTAAAACCCTGTTTTCTCTTTCC----TT-TT-TTCTTCTTCTTCTTC---TCTC--TCTCTACTGTTCCGTCGTCTGCTCATTTTTATCTTTCAGTATGAGTAAGGAGAAAGAACGGAGGATGTTCGTTGGTGTTGTTTGGAATTGTGCTGCTGAGCTTAAGCTTCTTCTTACTGCTCTTCTTTTTCTCTGTTCTCTTATTACACTTCTTCACTTTATCCCTTCTCGTTTAATAACTTTCTCCCCTGTAGATCTTGGCAGCTGTATTTCTACTCCCATCGCCCCACTTCACTCTGTTTCCCACTTAAACGCTACGAATTCATCAACCCCATCTGCTAATACGAGTACTACTACTCCACCGCCGGCACCGGAGTCGCCGTCGTTGGAGAAAGACAGACTGTTACAAAACGGTGTC</genome_strand>
        <mrna_strand>AAAGAGAGAGAGAGAGAATACTGGAAAGAAGCAGTA-GCATTGTAAAGAAGAAACATCTAGATATACTCTAGAATAACTAAAAGCCTGTTTTCTCTTTCCTTTTTTCTTCTTCTTCTTCTTCTTCTTATCTCTCTCTCTACTGTTCTGTCGTCTGCTCATTTTTATCTTTCAGTATGAGTAAGGAGAAAGAACGGAGGATGTTCGTTGGTGTTGTTTGGAATTGTGCTGCTGAGCTTAAGCTTCTTCTTACTGCTCTTCTTTTTCTCTGTTCTCTTATTACACTTCTTCACTTTATCCCTTCTCGTTTAATCACTTTCTCCCCTGTAGATCTTGGCAGCTGTATTTCTACTCCCACCGCCCCACTTCACTTTGTTTCCCACTTAAACGCTACTAATTCATCAACCCCATCTGCTAATACGAGTACTACTACTCCACCGCCGGCACCGGAGCCGCCGTCGTTGGAGAAAGACAGACTGTTACTAAACGGCGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E203927" ref_strand="+" ref_description="SGN-E203927 [cLEC-17-J14]">
      <seq>aagagagagagagaatactggaaagaagcagtaggcattgtaaagaagaaacatctagatatactctagaataactaaaaccctgttttctctttccttttttcttcttcttcttctctctctctactgttccgtcgtctgctcatttttatctttcagtatgagtaaggagaaagaacggaggatgttcgttggtgttgtttggaattgtgctgctgagcttaagcttcttcttactgctcttctttttctctgttctcttattacacttcttcactttatcccttctcgtttaataactttctcccctgtagatcttggcagctgtatttctactcccatcgccccacttcactctgtttcccacttaaacgctacgaattcatcaaccccatctgctaatacgagtactactactccaccgccggcaccggagtcgccgtcgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="62815" stop="63860"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63115" g_stop="63560" g_length="446"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="446" r_length="446" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E203927" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>446</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E203927" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63115" e_stop="63560"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGAGAGAGAGAATACTGGAAAGAAGCAGTAGGCATTGTAAAGAAGAAACATCTAGATATACTCTAGAATAACTAAAACCCTGTTTTCTCTTTCCTTTTTTCTTCTTCTTCTTCTCTCTCTCTACTGTTCCGTCGTCTGCTCATTTTTATCTTTCAGTATGAGTAAGGAGAAAGAACGGAGGATGTTCGTTGGTGTTGTTTGGAATTGTGCTGCTGAGCTTAAGCTTCTTCTTACTGCTCTTCTTTTTCTCTGTTCTCTTATTACACTTCTTCACTTTATCCCTTCTCGTTTAATAACTTTCTCCCCTGTAGATCTTGGCAGCTGTATTTCTACTCCCATCGCCCCACTTCACTCTGTTTCCCACTTAAACGCTACGAATTCATCAACCCCATCTGCTAATACGAGTACTACTACTCCACCGCCGGCACCGGAGTCGCCGTCGT</genome_strand>
        <mrna_strand>AAGAGAGAGAGAGAATACTGGAAAGAAGCAGTAGGCATTGTAAAGAAGAAACATCTAGATATACTCTAGAATAACTAAAACCCTGTTTTCTCTTTCCTTTTTTCTTCTTCTTCTTCTCTCTCTCTACTGTTCCGTCGTCTGCTCATTTTTATCTTTCAGTATGAGTAAGGAGAAAGAACGGAGGATGTTCGTTGGTGTTGTTTGGAATTGTGCTGCTGAGCTTAAGCTTCTTCTTACTGCTCTTCTTTTTCTCTGTTCTCTTATTACACTTCTTCACTTTATCCCTTCTCGTTTAATAACTTTCTCCCCTGTAGATCTTGGCAGCTGTATTTCTACTCCCATCGCCCCACTTCACTCTGTTTCCCACTTAAACGCTACGAATTCATCAACCCCATCTGCTAATACGAGTACTACTACTCCACCGCCGGCACCGGAGTCGCCGTCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E706830" ref_strand="+" ref_description="SGN-E706830 [FA31AC02]">
      <seq>gagagagagagaatactggaaagaagcagtaggcattgtaaagaagaaacatctagatatactctagaataactaaaaccctgttttctctttccttttttcttcttcttcttctctctctctactgttccgtcgtctgctcatttttatctttcagtatgagtaaggagaaagaacggaggatgttcgttggtgttgtttggaattgtgctgctgagcttaagcttcttcttactgctcttctttttctctgttctcttattacacttcttcactttatcccttctcgtttaataactttctcccctgtagatcttggcagctgtatttctactcccatcgccccacttcactctgtttcccacttaaacgctacgaattcatcaaccccatctgctaatacgagtactactactccaccgccggcaccggagtcgccgtcgttggagaaagacagactgttacaaaacggtgtcgttaagagagctttcaaccctttcggctccgccgcatacaactttattctgatgtctgcttatagaggaggttataacacttttgctgtaatgggtttaggttcaaagcctcttcacgtctacggcaaacccagttaccgttgtgagtgggtttcttctgataaacagaaaacccccatctccgttgttggtcataagatcctcccggactggggttatggcagggtttatactgtgatagtcataaattgcactttccctgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="62817" stop="64155"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63117" g_stop="63855" g_length="739"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="739" r_length="739" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E706830" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>739</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E706830" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63117" e_stop="63855"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAGAGAGAGAATACTGGAAAGAAGCAGTAGGCATTGTAAAGAAGAAACATCTAGATATACTCTAGAATAACTAAAACCCTGTTTTCTCTTTCCTTTTTTCTTCTTCTTCTTCTCTCTCTCTACTGTTCCGTCGTCTGCTCATTTTTATCTTTCAGTATGAGTAAGGAGAAAGAACGGAGGATGTTCGTTGGTGTTGTTTGGAATTGTGCTGCTGAGCTTAAGCTTCTTCTTACTGCTCTTCTTTTTCTCTGTTCTCTTATTACACTTCTTCACTTTATCCCTTCTCGTTTAATAACTTTCTCCCCTGTAGATCTTGGCAGCTGTATTTCTACTCCCATCGCCCCACTTCACTCTGTTTCCCACTTAAACGCTACGAATTCATCAACCCCATCTGCTAATACGAGTACTACTACTCCACCGCCGGCACCGGAGTCGCCGTCGTTGGAGAAAGACAGACTGTTACAAAACGGTGTCGTTAAGAGAGCTTTCAACCCTTTCGGCTCCGCCGCATACAACTTTATTCTGATGTCTGCTTATAGAGGAGGTTATAACACTTTTGCTGTAATGGGTTTAGGTTCAAAGCCTCTTCACGTCTACGGCAAACCCAGTTACCGTTGTGAGTGGGTTTCTTCTGATAAACAGAAAACCCCCATCTCCGTTGTTGGTCATAAGATCCTCCCGGACTGGGGTTATGGCAGGGTTTATACTGTGATAGTCATAAATTGCACTTTCCCTGT</genome_strand>
        <mrna_strand>GAGAGAGAGAGAATACTGGAAAGAAGCAGTAGGCATTGTAAAGAAGAAACATCTAGATATACTCTAGAATAACTAAAACCCTGTTTTCTCTTTCCTTTTTTCTTCTTCTTCTTCTCTCTCTCTACTGTTCCGTCGTCTGCTCATTTTTATCTTTCAGTATGAGTAAGGAGAAAGAACGGAGGATGTTCGTTGGTGTTGTTTGGAATTGTGCTGCTGAGCTTAAGCTTCTTCTTACTGCTCTTCTTTTTCTCTGTTCTCTTATTACACTTCTTCACTTTATCCCTTCTCGTTTAATAACTTTCTCCCCTGTAGATCTTGGCAGCTGTATTTCTACTCCCATCGCCCCACTTCACTCTGTTTCCCACTTAAACGCTACGAATTCATCAACCCCATCTGCTAATACGAGTACTACTACTCCACCGCCGGCACCGGAGTCGCCGTCGTTGGAGAAAGACAGACTGTTACAAAACGGTGTCGTTAAGAGAGCTTTCAACCCTTTCGGCTCCGCCGCATACAACTTTATTCTGATGTCTGCTTATAGAGGAGGTTATAACACTTTTGCTGTAATGGGTTTAGGTTCAAAGCCTCTTCACGTCTACGGCAAACCCAGTTACCGTTGTGAGTGGGTTTCTTCTGATAAACAGAAAACCCCCATCTCCGTTGTTGGTCATAAGATCCTCCCGGACTGGGGTTATGGCAGGGTTTATACTGTGATAGTCATAAATTGCACTTTCCCTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E739708" ref_strand="+" ref_description="SGN-E739708 [LC18CC02]">
      <seq>catagagagaatactggaaagaagcagtaggcattgtaaagaagaaacatctagatatactctagaataactaaaaccctgttttctctttccttttttcttcttcttcttctctctctctactgttccgtcgtctgctcatttttatctttcagtatgagtaaggagaaagaacggaggatgttcgttggtgttgtttggaattgtgctgctgagcttaagcttcttcttactgctcttctttttctctgttctcttattacacttcttcactttatcccttctcgtttaataactttctcccctgtagatcttggcagctgtatttctactcccatcgccccacttcactctgtttcccacttaaacgctacgaattcatcaaccccatctgctaatacgagtactactactccaccgccggcaccggagtcgccgtcgttggagaaagacagactgttacaaaacggtgtcgttaagagagctttcaaccctttcggctccgccgcatacaactttattctgatgtctgcttatagaggaggttataacacttttgctgtaatgggtttaggttcaaagcctcttcacgtctacggcaaacccagttaccgttgtgagtgggtttcttctgataaacagaaaacccccatctccgttgttggtcataagatcctcccggactggggttatggcagggtttatactgtgatagtcataaattgcactttccctgtaccagttggcaacggcgaaaatggcggaaaacttctcgttcacgccaccaccaacggcggcggcgacactaactttaacaccaccgacactttcaaggcattgtcggaaacgggaaaaggatttcgtcaacttcacttccgtatatgaagctcccccaaagtatgatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="62820" stop="64324"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63119" g_stop="64024" g_length="906"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="907" r_length="907" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E739708" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>906</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E739708" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63119" e_stop="64024"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAGAGAGAATACTGGAAAGAAGCAGTAGGCATTGTAAAGAAGAAACATCTAGATATACTCTAGAATAACTAAAACCCTGTTTTCTCTTTCCTTTTTTCTTCTTCTTCTTCTCTCTCTCTACTGTTCCGTCGTCTGCTCATTTTTATCTTTCAGTATGAGTAAGGAGAAAGAACGGAGGATGTTCGTTGGTGTTGTTTGGAATTGTGCTGCTGAGCTTAAGCTTCTTCTTACTGCTCTTCTTTTTCTCTGTTCTCTTATTACACTTCTTCACTTTATCCCTTCTCGTTTAATAACTTTCTCCCCTGTAGATCTTGGCAGCTGTATTTCTACTCCCATCGCCCCACTTCACTCTGTTTCCCACTTAAACGCTACGAATTCATCAACCCCATCTGCTAATACGAGTACTACTACTCCACCGCCGGCACCGGAGTCGCCGTCGTTGGAGAAAGACAGACTGTTACAAAACGGTGTCGTTAAGAGAGCTTTCAACCCTTTCGGCTCCGCCGCATACAACTTTATTCTGATGTCTGCTTATAGAGGAGGTTATAACACTTTTGCTGTAATGGGTTTAGGTTCAAAGCCTCTTCACGTCTACGGCAAACCCAGTTACCGTTGTGAGTGGGTTTCTTCTGATAAACAGAAAACCCCCATCTCCGTTGTTGGTCATAAGATCCTCCCGGACTGGGGTTATGGCAGGGTTTATACTGTGATAGTCATAAATTGCACTTTCCCTGTACCAGTTGGCAACGGCGAAAATGGCGGAAAACTTCTCGTTCACGCCACCACCAACGGCGGCGGCGACACTAACTTTAACACCACCGACACTTTCGAGGCATTGTCGGAAACGGG-AAAGGATTTCGTCAACTTCACTTCCGTATATGAAGCTCCCCCAAAGTATGATTTC</genome_strand>
        <mrna_strand>CATAGAGAGAATACTGGAAAGAAGCAGTAGGCATTGTAAAGAAGAAACATCTAGATATACTCTAGAATAACTAAAACCCTGTTTTCTCTTTCCTTTTTTCTTCTTCTTCTTCTCTCTCTCTACTGTTCCGTCGTCTGCTCATTTTTATCTTTCAGTATGAGTAAGGAGAAAGAACGGAGGATGTTCGTTGGTGTTGTTTGGAATTGTGCTGCTGAGCTTAAGCTTCTTCTTACTGCTCTTCTTTTTCTCTGTTCTCTTATTACACTTCTTCACTTTATCCCTTCTCGTTTAATAACTTTCTCCCCTGTAGATCTTGGCAGCTGTATTTCTACTCCCATCGCCCCACTTCACTCTGTTTCCCACTTAAACGCTACGAATTCATCAACCCCATCTGCTAATACGAGTACTACTACTCCACCGCCGGCACCGGAGTCGCCGTCGTTGGAGAAAGACAGACTGTTACAAAACGGTGTCGTTAAGAGAGCTTTCAACCCTTTCGGCTCCGCCGCATACAACTTTATTCTGATGTCTGCTTATAGAGGAGGTTATAACACTTTTGCTGTAATGGGTTTAGGTTCAAAGCCTCTTCACGTCTACGGCAAACCCAGTTACCGTTGTGAGTGGGTTTCTTCTGATAAACAGAAAACCCCCATCTCCGTTGTTGGTCATAAGATCCTCCCGGACTGGGGTTATGGCAGGGTTTATACTGTGATAGTCATAAATTGCACTTTCCCTGTACCAGTTGGCAACGGCGAAAATGGCGGAAAACTTCTCGTTCACGCCACCACCAACGGCGGCGGCGACACTAACTTTAACACCACCGACACTTTCAAGGCATTGTCGGAAACGGGAAAAGGATTTCGTCAACTTCACTTCCGTATATGAAGCTCCCCCAAAGTATGATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E332194" ref_strand="+" ref_description="SGN-E332194 [cTOD-16-L14]">
      <seq>tttaataactttctcccctgtagatcttggcagctgtatttctactcccatcgccccacttcactctgtttcccacttaaacgctacgaattcatcaaccccatctgctaatacgagtactactactccaccgccggcaccggagtcgccgtcgttggagaaagacagactgttacaaaacggtgtcgttaagagagctttcaaccctttcggctccgccgcatacaactttattctgatgtctgcttatagaggaggttataacacttttgctgtaatgggtttaggttcaaagcctcttcacgtctacggcaaacccagttaccgttgtgagtgggtttcttctgataaacagaaaacccccatctccgttgttggtcataagatcctcccggactggggttatggcagggtttatactgtgatagtcataaattgcactttccctgtaccagttggcaacggcgaaaatggcggaaaacttctcgttcacgccaccaccaacggcggcggcgacactaactttaacaccaccgacactttcgaggcattgtcggaaacgggaaaggatttcgtcaacttcacttccgtatatgaagctcccccaaagtatgatttcttctactgcgggtcatctctatacgggaacttgagcccacagagagtaagagagtggctggcatttcacgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="63106" stop="64396"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63406" g_stop="64096" g_length="691"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="691" r_length="691" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E332194" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>691</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332194" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63406" e_stop="64096"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAATAACTTTCTCCCCTGTAGATCTTGGCAGCTGTATTTCTACTCCCATCGCCCCACTTCACTCTGTTTCCCACTTAAACGCTACGAATTCATCAACCCCATCTGCTAATACGAGTACTACTACTCCACCGCCGGCACCGGAGTCGCCGTCGTTGGAGAAAGACAGACTGTTACAAAACGGTGTCGTTAAGAGAGCTTTCAACCCTTTCGGCTCCGCCGCATACAACTTTATTCTGATGTCTGCTTATAGAGGAGGTTATAACACTTTTGCTGTAATGGGTTTAGGTTCAAAGCCTCTTCACGTCTACGGCAAACCCAGTTACCGTTGTGAGTGGGTTTCTTCTGATAAACAGAAAACCCCCATCTCCGTTGTTGGTCATAAGATCCTCCCGGACTGGGGTTATGGCAGGGTTTATACTGTGATAGTCATAAATTGCACTTTCCCTGTACCAGTTGGCAACGGCGAAAATGGCGGAAAACTTCTCGTTCACGCCACCACCAACGGCGGCGGCGACACTAACTTTAACACCACCGACACTTTCGAGGCATTGTCGGAAACGGGAAAGGATTTCGTCAACTTCACTTCCGTATATGAAGCTCCCCCAAAGTATGATTTCTTCTACTGCGGGTCATCTCTATACGGGAACTTGAGCCCACAGAGAGTAAGAGAGTGGCTGGCATTTCACGTT</genome_strand>
        <mrna_strand>TTTAATAACTTTCTCCCCTGTAGATCTTGGCAGCTGTATTTCTACTCCCATCGCCCCACTTCACTCTGTTTCCCACTTAAACGCTACGAATTCATCAACCCCATCTGCTAATACGAGTACTACTACTCCACCGCCGGCACCGGAGTCGCCGTCGTTGGAGAAAGACAGACTGTTACAAAACGGTGTCGTTAAGAGAGCTTTCAACCCTTTCGGCTCCGCCGCATACAACTTTATTCTGATGTCTGCTTATAGAGGAGGTTATAACACTTTTGCTGTAATGGGTTTAGGTTCAAAGCCTCTTCACGTCTACGGCAAACCCAGTTACCGTTGTGAGTGGGTTTCTTCTGATAAACAGAAAACCCCCATCTCCGTTGTTGGTCATAAGATCCTCCCGGACTGGGGTTATGGCAGGGTTTATACTGTGATAGTCATAAATTGCACTTTCCCTGTACCAGTTGGCAACGGCGAAAATGGCGGAAAACTTCTCGTTCACGCCACCACCAACGGCGGCGGCGACACTAACTTTAACACCACCGACACTTTCGAGGCATTGTCGGAAACGGGAAAGGATTTCGTCAACTTCACTTCCGTATATGAAGCTCCCCCAAAGTATGATTTCTTCTACTGCGGGTCATCTCTATACGGGAACTTGAGCCCACAGAGAGTAAGAGAGTGGCTGGCATTTCACGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E332192" ref_strand="+" ref_description="SGN-E332192 [cTOD-16-L10]">
      <seq>tttaataactttctcccctgtagatcttggcagctgtatttctactcccatcgccccacttcactctgtttcccacttaaacgctacgaattcatcaaccccatctgctaatacgagtactactactccaccgccggcaccggagtcgccgtcgttggagaaagacagactgttacaaaacggtgtcgttaagagagctttcaaccctttcggctccgccgcatacaactttattctgatgtctgcttatagaggaggttataacacttttgctgtaatgggtttaggttcaaagcctcttcacgtctacggcaaacccagttaccgttgtgagtgggtttcttctgataaacagaaaacccccatctccgttgttggtcataagatcctcccggactggggttatggcagggtttatactgtgatagtcataaattgcactttccctgtaccagttggcaacggcgaaaatggcggaaaacttctcgttcacgccaccaccaacggcggcggcgacactaactttaacaccaccgacactttcgaggcattgtcggaaacgggaaaggatttcgtcaacttcacttccgtatatgaagctcccccaaagtatgatttcttctactgcgggtcatctctatacgggaactttgagccacagagagtaagagagtggctggcatttcacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="63106" stop="64394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63406" g_stop="64094" g_length="689"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="689" r_length="689" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E332192" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>689</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332192" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63406" e_stop="64094"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAATAACTTTCTCCCCTGTAGATCTTGGCAGCTGTATTTCTACTCCCATCGCCCCACTTCACTCTGTTTCCCACTTAAACGCTACGAATTCATCAACCCCATCTGCTAATACGAGTACTACTACTCCACCGCCGGCACCGGAGTCGCCGTCGTTGGAGAAAGACAGACTGTTACAAAACGGTGTCGTTAAGAGAGCTTTCAACCCTTTCGGCTCCGCCGCATACAACTTTATTCTGATGTCTGCTTATAGAGGAGGTTATAACACTTTTGCTGTAATGGGTTTAGGTTCAAAGCCTCTTCACGTCTACGGCAAACCCAGTTACCGTTGTGAGTGGGTTTCTTCTGATAAACAGAAAACCCCCATCTCCGTTGTTGGTCATAAGATCCTCCCGGACTGGGGTTATGGCAGGGTTTATACTGTGATAGTCATAAATTGCACTTTCCCTGTACCAGTTGGCAACGGCGAAAATGGCGGAAAACTTCTCGTTCACGCCACCACCAACGGCGGCGGCGACACTAACTTTAACACCACCGACACTTTCGAGGCATTGTCGGAAACGGGAAAGGATTTCGTCAACTTCACTTCCGTATATGAAGCTCCCCCAAAGTATGATTTCTTCTACTGCGGGTCATCTCTATACGGGAACTTGAGCCCACAGAGAGTAAGAGAGTGGCTGGCATTTCACG</genome_strand>
        <mrna_strand>TTTAATAACTTTCTCCCCTGTAGATCTTGGCAGCTGTATTTCTACTCCCATCGCCCCACTTCACTCTGTTTCCCACTTAAACGCTACGAATTCATCAACCCCATCTGCTAATACGAGTACTACTACTCCACCGCCGGCACCGGAGTCGCCGTCGTTGGAGAAAGACAGACTGTTACAAAACGGTGTCGTTAAGAGAGCTTTCAACCCTTTCGGCTCCGCCGCATACAACTTTATTCTGATGTCTGCTTATAGAGGAGGTTATAACACTTTTGCTGTAATGGGTTTAGGTTCAAAGCCTCTTCACGTCTACGGCAAACCCAGTTACCGTTGTGAGTGGGTTTCTTCTGATAAACAGAAAACCCCCATCTCCGTTGTTGGTCATAAGATCCTCCCGGACTGGGGTTATGGCAGGGTTTATACTGTGATAGTCATAAATTGCACTTTCCCTGTACCAGTTGGCAACGGCGAAAATGGCGGAAAACTTCTCGTTCACGCCACCACCAACGGCGGCGGCGACACTAACTTTAACACCACCGACACTTTCGAGGCATTGTCGGAAACGGGAAAGGATTTCGTCAACTTCACTTCCGTATATGAAGCTCCCCCAAAGTATGATTTCTTCTACTGCGGGTCATCTCTATACGGGAACTTTGAGCCACAGAGAGTAAGAGAGTGGCTGGCATTTCACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E203724" ref_strand="+" ref_description="SGN-E203724 [cLEC-17-I1]">
      <seq>atttcgtcaacttcacttccgtatatgaagctcccccaaagtatgatttcttctactgcgggtcatctctatacgggaacttgagcccacagagagtaagagagtggctggcatttcacgttaggctgttcggagagaagtcccatttcgtaattcacgatgctggaggtgtacatgagggggtaatggaggtgcttaagccatggatggagaaaggatacgttacattacaggatattagggaccaagagagatttgatgggtactatcataat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="63675" stop="64549"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63975" g_stop="64249" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="275" r_length="275" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E203724" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>275</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E203724" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63975" e_stop="64249"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCGTCAACTTCACTTCCGTATATGAAGCTCCCCCAAAGTATGATTTCTTCTACTGCGGGTCATCTCTATACGGGAACTTGAGCCCACAGAGAGTAAGAGAGTGGCTGGCATTTCACGTTAGGCTGTTCGGAGAGAAGTCCCATTTCGTAATTCACGATGCTGGAGGTGTACATGAGGGGGTAATGGAGGTGCTTAAGCCATGGATGGAGAAAGGATACGTTACATTACAGGATATTAGGGACCAAGAGAGATTTGATGGGTACTATCATAAT</genome_strand>
        <mrna_strand>ATTTCGTCAACTTCACTTCCGTATATGAAGCTCCCCCAAAGTATGATTTCTTCTACTGCGGGTCATCTCTATACGGGAACTTGAGCCCACAGAGAGTAAGAGAGTGGCTGGCATTTCACGTTAGGCTGTTCGGAGAGAAGTCCCATTTCGTAATTCACGATGCTGGAGGTGTACATGAGGGGGTAATGGAGGTGCTTAAGCCATGGATGGAGAAAGGATACGTTACATTACAGGATATTAGGGACCAAGAGAGATTTGATGGGTACTATCATAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E390131" ref_strand="+" ref_description="SGN-E390131 [TUS-17-O1]">
      <seq>ggtaatggaggtgcttaagccatggatggagaaaggatacgttacattacaggatattagggaccaagagagatttgatgggtactatcataatcagttccttattgtcaatgattgcttacacagatataagtttcaagctaaatggatgttcttctttgatgtggatgagtacatttatgtaccaaagaagagcaccattaaatctgttgtgaattccttatcggattatacacaattcaccattgaacagatgccaatgtctaacaagctctgtctcgaagaggaccgcggtaaatcctatagaaaatgggggtttgagaagctagtgtacaaggacgtgaagacaggtattaggagggatcgaaaatatgcagtacaacctcgcaatgtgatcgccaacggtgtgcatatgtctcagaatacagtaggcaagacaacacacaagacagaaggacgtatcaaatacttccactatcacgggaccatcgcggagcaccgtgaaccatgccggcagctggtcaacaccacagccatcaccgttgacggtatcccttataatgttgacactacaatgagagatgttgctgcaactgttaagagattcaaacttaagatgattggcactacattacaaagaacgcggcaatgaagtcaacattgtcttgtactttgttttcaacatgtgttatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="63856" stop="66039"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64156" g_stop="64461" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="306" r_length="306" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64462" i_stop="65352" i_length="891">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65353" g_stop="65739" g_length="387"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="693" r_length="387" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E390131" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E390131" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64156" e_stop="64461"/>
          <exon e_start="65353" e_stop="65739"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTAATGGAGGTGCTTAAGCCATGGATGGAGAAAGGATACGTTACATTACAGGATATTAGGGACCAAGAGAGATTTGATGGGTACTATCATAATCAGTTCCTTATTGTCAATGATTGCTTACACAGATATAAGTTTCAAGCTAAATGGATGTTCTTCTTTGATGTGGATGAGTACATTTATGTACCAAAGAAGAGCACCATTAAATCTGTTGTGAATTCCTTATCGGATTATACACAATTCACCATTGAACAGATGCCAATGTCTAACAAGCTCTGTCTCGAAGAGGACCGCGGTAAATCCTATAGGTAACTTTTCCAGACACCCATTCACCTTGTGAATTTCTTAGTTTAGTTCAATTTGGCATTTACTTATGCATTTATTGGTCAACATGTTTCTCACCAAACATTCAAGATGCTGAATTTCGATTGACCCGTGTTGGTATTTTTAATTGAAATAAAGAATTTTGCTACTTAAACTAAATCAACCATCCCAATTTGGATAAATTTGTTTAGTATCAAGACAATATATTAATGTTGATTGTTGTTCCTCTAAACATGAGGTCTTTCTCTGTTACAGAGCATATAGTTAGATATTCTGGTAATATTTTGTTGATTTGTTGATGTCTTGTAGTGGTAGATAATTGAGATGCTTTGATGGGTTATTAGACTGTTCACGAGTAAAGGAATTCTTGATTGCTACTTTAGTTTGGTGATTAGTCTTGTGATCTTGGCTTAAAAATTTGATTAATGCCTTATTTTGTATTTGCTCTAGTGGAAGCTTAGCTGTCTTAATTTGTCAATATTCTAATTACCTTAATGAGACCTGTATTAGCTGGATCAAATGTTTTTTCCATGGTGTTTGGAATGGAACCTCGACCAAATTAGCTGTCCTGAAAAAATTTAGATACTTAATGCTCATCACCAATTAAAGTTGTGTTTTTTAATATTTAGTTGTCATTACCTAGTTGTAACTGCGCGTTCTTTTAGTGAGTAAAAATTGTATCTTTGAATAATTGAATCCACTATTCGTATATGGTATGCTTGATTTTGATAGACCAGAAGACTGGATAAAAGAAAACGATTTGTGGGTTTTTACGAGTCGTTTTCAACTAAAAATCGTCTTTGCTTAATATATTTTGGATGAAGTTATGTGTTCAAACACTTAAAACTGATGATTCAATGCTAATTTGGCTACAGAAAATGGGGGTTTGAGAAGCTAGTGTACAAGGACGTGAAGACAGGTATTAGGAGGGATCGAAAATATGCAGTACAACCTCGCAATGTGATCGCCAACGGTGTGCATATGTCTCAGAATACAGTAGGCAAGACAACACACAAGACAGAAGGACGTATCAAATACTTCCACTATCACGGGACCATCGCGGAGCACCGTGAACCATGCCGGCAGCTGGTCAACACCACAGCCATCACCGTTGACGGTATCCCTTATAATGTTGACACTACAATGAGAGATGTTGCTGCAACTGTTAAGAGATTCGAACTTAAGATGATTGGCACTACATTACAAAGAACGCGGCAATGAGGTCAACATTGTCTTGTACTTTGTTTTCAACATGTGTTATT</genome_strand>
        <mrna_strand>GGTAATGGAGGTGCTTAAGCCATGGATGGAGAAAGGATACGTTACATTACAGGATATTAGGGACCAAGAGAGATTTGATGGGTACTATCATAATCAGTTCCTTATTGTCAATGATTGCTTACACAGATATAAGTTTCAAGCTAAATGGATGTTCTTCTTTGATGTGGATGAGTACATTTATGTACCAAAGAAGAGCACCATTAAATCTGTTGTGAATTCCTTATCGGATTATACACAATTCACCATTGAACAGATGCCAATGTCTAACAAGCTCTGTCTCGAAGAGGACCGCGGTAAATCCTATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGGGGGTTTGAGAAGCTAGTGTACAAGGACGTGAAGACAGGTATTAGGAGGGATCGAAAATATGCAGTACAACCTCGCAATGTGATCGCCAACGGTGTGCATATGTCTCAGAATACAGTAGGCAAGACAACACACAAGACAGAAGGACGTATCAAATACTTCCACTATCACGGGACCATCGCGGAGCACCGTGAACCATGCCGGCAGCTGGTCAACACCACAGCCATCACCGTTGACGGTATCCCTTATAATGTTGACACTACAATGAGAGATGTTGCTGCAACTGTTAAGAGATTCAAACTTAAGATGATTGGCACTACATTACAAAGAACGCGGCAATGAAGTCAACATTGTCTTGTACTTTGTTTTCAACATGTGTTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E208370" ref_strand="+" ref_description="SGN-E208370 [cLEC-37-I22]">
      <seq>gtaatggaggtgcttaagccatggatggagaaaggatacgttacattacaggatattagggaccaagagagatttgatgggtactatcataatcagttccttattgtcaatgattgcttacacagatataagtttcaagctaaatggatgttcttctttgatgtggatgagtacatttatgtaccaaagaagagcaccattaaatctgttgtgaattccttatcggattatacacaattcaccattgaacagatgccaatgtctaacaagctctgtctcgaagaggaccgcggtanatcctatagaagatgggggtttgagaagctagtgtacaaggacgtgaagacaggtattaggagggatcgaaaatatgcagtacaacctcgcaatgtgatcgccaacggtgtgcatatgtctcagaatacagtaggcaagacaacacacaagacagaatgacgtatcaaatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="63857" stop="65816"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64157" g_stop="64461" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="305" r_length="305" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64462" i_stop="65352" i_length="891">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65353" g_stop="65516" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="469" r_length="164" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E208370" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E208370" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64157" e_stop="64461"/>
          <exon e_start="65353" e_stop="65516"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAATGGAGGTGCTTAAGCCATGGATGGAGAAAGGATACGTTACATTACAGGATATTAGGGACCAAGAGAGATTTGATGGGTACTATCATAATCAGTTCCTTATTGTCAATGATTGCTTACACAGATATAAGTTTCAAGCTAAATGGATGTTCTTCTTTGATGTGGATGAGTACATTTATGTACCAAAGAAGAGCACCATTAAATCTGTTGTGAATTCCTTATCGGATTATACACAATTCACCATTGAACAGATGCCAATGTCTAACAAGCTCTGTCTCGAAGAGGACCGCGGTAAATCCTATAGGTAACTTTTCCAGACACCCATTCACCTTGTGAATTTCTTAGTTTAGTTCAATTTGGCATTTACTTATGCATTTATTGGTCAACATGTTTCTCACCAAACATTCAAGATGCTGAATTTCGATTGACCCGTGTTGGTATTTTTAATTGAAATAAAGAATTTTGCTACTTAAACTAAATCAACCATCCCAATTTGGATAAATTTGTTTAGTATCAAGACAATATATTAATGTTGATTGTTGTTCCTCTAAACATGAGGTCTTTCTCTGTTACAGAGCATATAGTTAGATATTCTGGTAATATTTTGTTGATTTGTTGATGTCTTGTAGTGGTAGATAATTGAGATGCTTTGATGGGTTATTAGACTGTTCACGAGTAAAGGAATTCTTGATTGCTACTTTAGTTTGGTGATTAGTCTTGTGATCTTGGCTTAAAAATTTGATTAATGCCTTATTTTGTATTTGCTCTAGTGGAAGCTTAGCTGTCTTAATTTGTCAATATTCTAATTACCTTAATGAGACCTGTATTAGCTGGATCAAATGTTTTTTCCATGGTGTTTGGAATGGAACCTCGACCAAATTAGCTGTCCTGAAAAAATTTAGATACTTAATGCTCATCACCAATTAAAGTTGTGTTTTTTAATATTTAGTTGTCATTACCTAGTTGTAACTGCGCGTTCTTTTAGTGAGTAAAAATTGTATCTTTGAATAATTGAATCCACTATTCGTATATGGTATGCTTGATTTTGATAGACCAGAAGACTGGATAAAAGAAAACGATTTGTGGGTTTTTACGAGTCGTTTTCAACTAAAAATCGTCTTTGCTTAATATATTTTGGATGAAGTTATGTGTTCAAACACTTAAAACTGATGATTCAATGCTAATTTGGCTACAGAAAATGGGGGTTTGAGAAGCTAGTGTACAAGGACGTGAAGACAGGTATTAGGAGGGATCGAAAATATGCAGTACAACCTCGCAATGTGATCGCCAACGGTGTGCATATGTCTCAGAATACAGTAGGCAAGACAACACACAAGACAGAAGGACGTATCAAATACT</genome_strand>
        <mrna_strand>GTAATGGAGGTGCTTAAGCCATGGATGGAGAAAGGATACGTTACATTACAGGATATTAGGGACCAAGAGAGATTTGATGGGTACTATCATAATCAGTTCCTTATTGTCAATGATTGCTTACACAGATATAAGTTTCAAGCTAAATGGATGTTCTTCTTTGATGTGGATGAGTACATTTATGTACCAAAGAAGAGCACCATTAAATCTGTTGTGAATTCCTTATCGGATTATACACAATTCACCATTGAACAGATGCCAATGTCTAACAAGCTCTGTCTCGAAGAGGACCGCGGTANATCCTATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATGGGGGTTTGAGAAGCTAGTGTACAAGGACGTGAAGACAGGTATTAGGAGGGATCGAAAATATGCAGTACAACCTCGCAATGTGATCGCCAACGGTGTGCATATGTCTCAGAATACAGTAGGCAAGACAACACACAAGACAGAATGACGTATCAAATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E734009" ref_strand="+" ref_description="SGN-E734009 [LB11CB09]">
      <seq>cttacattacaggatattagggaccaagagagatttgatgggtactatcataatcagttccttattgtcaatgattgcttacacagatataagtttcaagctaaatggatgttcttctttgatgtggatgagtacatttatgtaccaaagaagagcaccattaaatctgttgtgaattccttatcggattatacacaattcaccattgaacagatgccaatgtctaacaagctctgtctcgaagaggaccgcggtaaatcctatagaaaatgggggtttgagaagctagtgtacaaggacgtgaagacaggtattaggagggatcgaaaatatgcagtacaacctcgcaatgtgatcgccaacggtgtgcatatgtctcagaatacagtaggcaagacaacacacaagacagaaggacgtatcaaatacttccactatcacgggaccatcgcggagcaccgtgaaccatgccggcagctggtcaacaccacagccatcaccgttgacggtatcccttataatgttgacactacaatgagagatgttgctgcaactgttaagagattcgaacttaagatgattggcactacattacaaagaacgcggcaatgaggtcaacattgtcttgtactttgttttcaacatgtgttattacttttaagtttcttttggttagagctatatatattcttcttctcttgttcatttctgtatgataaaatttttcttatactttttgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="63897" stop="66127"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64196" g_stop="64461" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="266" r_length="266" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64462" i_stop="65352" i_length="891">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65353" g_stop="65827" g_length="475"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="741" r_length="475" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E734009" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E734009" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64196" e_stop="64461"/>
          <exon e_start="65353" e_stop="65827"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTACATTACAGGATATTAGGGACCAAGAGAGATTTGATGGGTACTATCATAATCAGTTCCTTATTGTCAATGATTGCTTACACAGATATAAGTTTCAAGCTAAATGGATGTTCTTCTTTGATGTGGATGAGTACATTTATGTACCAAAGAAGAGCACCATTAAATCTGTTGTGAATTCCTTATCGGATTATACACAATTCACCATTGAACAGATGCCAATGTCTAACAAGCTCTGTCTCGAAGAGGACCGCGGTAAATCCTATAGGTAACTTTTCCAGACACCCATTCACCTTGTGAATTTCTTAGTTTAGTTCAATTTGGCATTTACTTATGCATTTATTGGTCAACATGTTTCTCACCAAACATTCAAGATGCTGAATTTCGATTGACCCGTGTTGGTATTTTTAATTGAAATAAAGAATTTTGCTACTTAAACTAAATCAACCATCCCAATTTGGATAAATTTGTTTAGTATCAAGACAATATATTAATGTTGATTGTTGTTCCTCTAAACATGAGGTCTTTCTCTGTTACAGAGCATATAGTTAGATATTCTGGTAATATTTTGTTGATTTGTTGATGTCTTGTAGTGGTAGATAATTGAGATGCTTTGATGGGTTATTAGACTGTTCACGAGTAAAGGAATTCTTGATTGCTACTTTAGTTTGGTGATTAGTCTTGTGATCTTGGCTTAAAAATTTGATTAATGCCTTATTTTGTATTTGCTCTAGTGGAAGCTTAGCTGTCTTAATTTGTCAATATTCTAATTACCTTAATGAGACCTGTATTAGCTGGATCAAATGTTTTTTCCATGGTGTTTGGAATGGAACCTCGACCAAATTAGCTGTCCTGAAAAAATTTAGATACTTAATGCTCATCACCAATTAAAGTTGTGTTTTTTAATATTTAGTTGTCATTACCTAGTTGTAACTGCGCGTTCTTTTAGTGAGTAAAAATTGTATCTTTGAATAATTGAATCCACTATTCGTATATGGTATGCTTGATTTTGATAGACCAGAAGACTGGATAAAAGAAAACGATTTGTGGGTTTTTACGAGTCGTTTTCAACTAAAAATCGTCTTTGCTTAATATATTTTGGATGAAGTTATGTGTTCAAACACTTAAAACTGATGATTCAATGCTAATTTGGCTACAGAAAATGGGGGTTTGAGAAGCTAGTGTACAAGGACGTGAAGACAGGTATTAGGAGGGATCGAAAATATGCAGTACAACCTCGCAATGTGATCGCCAACGGTGTGCATATGTCTCAGAATACAGTAGGCAAGACAACACACAAGACAGAAGGACGTATCAAATACTTCCACTATCACGGGACCATCGCGGAGCACCGTGAACCATGCCGGCAGCTGGTCAACACCACAGCCATCACCGTTGACGGTATCCCTTATAATGTTGACACTACAATGAGAGATGTTGCTGCAACTGTTAAGAGATTCGAACTTAAGATGATTGGCACTACATTACAAAGAACGCGGCAATGAGGTCAACATTGTCTTGTACTTTGTTTTCAACATGTGTTATTACTTTTAAGTTTCTTTTGGTTAGAGCTATATATATTCTTCTTCTCTTGTTCATTTCTGTATGATAAAATTTTTCTTATACTTTTTGGA</genome_strand>
        <mrna_strand>CTTACATTACAGGATATTAGGGACCAAGAGAGATTTGATGGGTACTATCATAATCAGTTCCTTATTGTCAATGATTGCTTACACAGATATAAGTTTCAAGCTAAATGGATGTTCTTCTTTGATGTGGATGAGTACATTTATGTACCAAAGAAGAGCACCATTAAATCTGTTGTGAATTCCTTATCGGATTATACACAATTCACCATTGAACAGATGCCAATGTCTAACAAGCTCTGTCTCGAAGAGGACCGCGGTAAATCCTATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGGGGGTTTGAGAAGCTAGTGTACAAGGACGTGAAGACAGGTATTAGGAGGGATCGAAAATATGCAGTACAACCTCGCAATGTGATCGCCAACGGTGTGCATATGTCTCAGAATACAGTAGGCAAGACAACACACAAGACAGAAGGACGTATCAAATACTTCCACTATCACGGGACCATCGCGGAGCACCGTGAACCATGCCGGCAGCTGGTCAACACCACAGCCATCACCGTTGACGGTATCCCTTATAATGTTGACACTACAATGAGAGATGTTGCTGCAACTGTTAAGAGATTCGAACTTAAGATGATTGGCACTACATTACAAAGAACGCGGCAATGAGGTCAACATTGTCTTGTACTTTGTTTTCAACATGTGTTATTACTTTTAAGTTTCTTTTGGTTAGAGCTATATATATTCTTCTTCTCTTGTTCATTTCTGTATGATAAAATTTTTCTTATACTTTTTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E339245" ref_strand="+" ref_description="SGN-E339245 [cTOF-4-G20]">
      <seq>cggcaatgaggtcaacattgtcttgtactttgttttcaacatgtgttattacttttaagtttcttttggttagagctatatatattcttcttctcttgttcatttctgtatgataaaatttttcttatactttttggaatagaagcatgggtggtatagaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="65390" stop="66153"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65690" g_stop="65858" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="169" r_length="169" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E339245" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>169</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E339245" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65690" e_stop="65858"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGCAATGAGGTCAACATTGTCTTGTACTTTGTTTTCAACATGTGTTATTACTTTTAAGTTTCTTTTGGTTAGAGCTATATATATTCTTCTTCTCTTGTTCATTTCTGTATGATAAAATTTTTCTTATACTTTTTGGAATAGAAGCATGGGTGGTATAGAAACAGCAGT</genome_strand>
        <mrna_strand>CGGCAATGAGGTCAACATTGTCTTGTACTTTGTTTTCAACATGTGTTATTACTTTTAAGTTTCTTTTGGTTAGAGCTATATATATTCTTCTTCTCTTGTTCATTTCTGTATGATAAAATTTTTCTTATACTTTTTGGAATAGAAGCATGGGTGGTATAGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E200845" ref_strand="+" ref_description="SGN-E200845 [cLEC-5-G3]">
      <seq>aaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaatagaaacagaatttatacacttctgtgtatatagcgagataggcgagcgagaatggagagtggcgagcgagatttttgggagggagacgcctgacaaactttagctaacgtttgctatggagcacaattaaatcaaactctagctactccatttagttagattactag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="76416" stop="75365"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76116" g_stop="75665" g_length="452"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="450" r_length="450" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E200845" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>452</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E200845" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76116" e_stop="75665"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAATATATATGTTTTTTCTCTCGCTTTATACAAAAACGGAAACACAATATATACACTTCTGTTGTATAAAGCTAGAGAAAATTGTATTTCACTGCAATTGCATAATTCGCAATTGTGTAATTCGTTGGCCTTTTCCTCTGCAATATCTGAAGTGAACTGTTTGTAAATTGTATAATTAAGTGTATAACACGAAGATATATATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAAAAACAAAATTTATACACTTTTGTGTATAAAGCGAGAGAGGCGAGCGAGAATGGAGAGTGGCGAGCGAGATTTTTGGGAGAGAGACGCTTGACAAACTTTAACTAACGTTTGCTATGGAGCACAATTAAATCAAACCCTAACTACTCCATTTATTTTAGGTTATTAG</genome_strand>
        <mrna_strand>AAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATG-TTTTTGTCTCGCTTTATACAAAAACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAGAAACAGAATTTATACACTTCTGTGTATATAGCGAGATAGGCGAGCGAGAATGGAGAGTGGCGAGCGAGATTTTTGGGAGGGAGACGCCTGACAAACTTTAGCTAACGTTTGCTATGGAGCACAATTAAATCAAACTCTAGCTACTCCATTTA-GTTAGATTACTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E393076" ref_strand="+" ref_description="SGN-E393076 [TUS-37-J4]">
      <seq>taaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaataaaaacagaatttatttttttttgtgtatatagcgagatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="76417" stop="75518"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76117" g_stop="75792" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="325" r_length="325" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E393076" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>326</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393076" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76117" e_stop="75792"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAATATATATGTTTTTTCTCTCGCTTTATACAAAAACGGAAACACAATATATACACTTCTGTTGTATAAAGCTAGAGAAAATTGTATTTCACTGCAATTGCATAATTCGCAATTGTGTAATTCGTTGGCCTTTTCCTCTGCAATATCTGAAGTGAACTGTTTGTAAATTGTATAATTAAGTGTATAACACGAAGATATATATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAAAAACAAAATTTATACACTTTTGTGTATAAAGCGAGAGAG</genome_strand>
        <mrna_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATG-TTTTTGTCTCGCTTTATACAAAAACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAAAAACAGAATTTATTTTTTTTTGTGTATATAGCGAGATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E393075" ref_strand="+" ref_description="SGN-E393075 [TUS-37-J2]">
      <seq>taaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaatagaaacagaggttttttttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="76417" stop="75518"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76117" g_stop="75809" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="308" r_length="308" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E393075" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>309</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393075" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76117" e_stop="75809"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAATATATATGTTTTTTCTCTCGCTTTATACAAAAACGGAAACACAATATATACACTTCTGTTGTATAAAGCTAGAGAAAATTGTATTTCACTGCAATTGCATAATTCGCAATTGTGTAATTCGTTGGCCTTTTCCTCTGCAATATCTGAAGTGAACTGTTTGTAAATTGTATAATTAAGTGTATAACACGAAGATATATATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAAAAACAAAATTTATACACTTTTG</genome_strand>
        <mrna_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATG-TTTTTGTCTCGCTTTATACAAAAACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAGAAACAGAGGTTTTTTTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E392727" ref_strand="+" ref_description="SGN-E392727 [TUS-37-J5]">
      <seq>taatatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtcacgctttatacaaaatttaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="106368" stop="75664"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76117" g_stop="75964" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="153" r_length="153" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E392727" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>154</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392727" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76117" e_stop="75964"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAATATATATGTTTTTTCTCTCGCTTTATACAAAAACGGAAACACAATATATACACTTCTGTTGTATAAAGCTAGAGAAAATTGTATTTCACTGCAATTGCATAATTCGCAATT</genome_strand>
        <mrna_strand>TAATATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATG-TTTTTGTCACGCTTTATACAAAATTTAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E745974" ref_strand="+" ref_description="SGN-E745974 [GI|47105428]">
      <seq>gaattcagtgctcgctctctaaaaaggcaaaggttttcgtctcatctgtcacacaacacgacacacattcttcatcttttctccgccgcttcaaaaattttcatacaaaaaccaattagcttttcagcagagaattaatggagttatcagctcaacaaccaccagcagcgcttaaccaaaatcgacagcaagatcaacagcaggccgcgtggtttatcagagcagtactggcgaagatcatcatgtattgtagcaacaacaaaggtggtactggcagagtaagcaccagatccaaaatgcaagcagaaatgggcaagcgttactatatgattttactggttatcaattacatgtgtctcttcttgggttccgtttcgtctagtctgctttcgaaattctacttcaatcacaaaggtggcagtagatgggtttccacttgggtacaatgtgctggttttcctcttcttctattcccaatctgctttttcagaattttcaccgacagaaaattgttttctgggttcacccctaaaatcatcgccctctcaattctcatcgggttgttgttgggggttaacaatcttcttttctcttgggggaattcttatcttcctgtttcaacgaattctctggttttgtctactcaattggcctttaccctcgttacttccatgattatcgtcaagcaaaaaatcacataccccaatctgaactgtgtcgtcgttctcaccctcagttcggtcatattagccctgagttcaagtcacgacaaaccgattggattaacaaaggcgaagtacttcaaaggctttttctcaaccgtaggtgcaggattgatgttcgctctttacctccctgtcatggagaagatataccaaagagttaactgctacgccatggtagtggaaatgcagctggtcatggagatagcggcgacggtgttggccacggtgggtatggcagcggacggcggtttctctgagatgaagagggagagcttgaaggtgttcgatttaggaccgaaagcgtactggctgacggtggggtttaatgtggtgacgtggcaggtgtgtttcatgggtacggcagggatggtgtttttgacgacgtcgttaactggaggtgtatgcatgacggcgctgatggggataaacgtgttgggtggagtattagtttacggtgattatttcagtgggcttaaagctgtgtcgacttcgctatgtgtatggggattttgttcatatatttacggcatttatatgaacatgaaggaagaagacgagaatagcatagagaagaatgtgaagaagatgaacagtgatcatattatggaacttgcagagattgttgttacgcataacgcctcagggtgatcacgtgacatctctctctattttgttttcgttttattcgaatatattaggggtattctggagctggtttataactggcaagtgtttgtattcaagttaagtaatggaaaagtaaggagtaatgatttatggttttgacctaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="83144" stop="81021"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82845" g_stop="81316" g_length="1530"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1530" r_length="1530" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E745974" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1530</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E745974" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82845" e_stop="81316"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTCAGTGCTCGCTCTCTAAAAAGGCAAAGGTTTTCGTCTCATCTGTCACACAACACAACACACATTCTTCATCTTTTCTCCGCCGCTTCAAAAATTTTCATACAAAAACCAATTAGCTTTTCAGCAGAGAATTAATGGAGTTATCAGCTCAACAACCACCAGCAGCGCTTAACCAAAATCGACAGCAAGATCAACAGCAGGCCGCGTGGTTTATCAGAGCAGTACTGGCGAAGATCATCATGTATTGTAGCAACAACAAAGGTGGTACTGGCAGAGTAAGCACCAGATCCAAAATGCAAGCAGAAATGGGCAAGCGTTACTATATGATTTTACTGGTTATCAATTACATGTGTCTCTTCTTGGGTTCCGTTTCGTCTAGTCTGCTTTCGAAATTCTACTTCAATCACAAAGGTGGCAGTAGATGGGTTTCCACTTGGGTACAATGTGCTGGTTTTCCTCTTCTTCTATTCCCAATCTGCTTTTTCAGAATTTTCACCGACAGAAAATTGTTTTCTGGGTTCACCCCTAAAATCATCGCCCTCTCAATTCTCATCGGGTTGTTGTTGGGGGTTAACAATCTTCTTTTCTCTTGGGGGAATTCTTATCTTCCTGTTTCAACGAATTCTCTGGTTTTGTCTACTCAATTGGCCTTTACCCTCGTTACTTCCATGATTATCGTCAAGCAAAAAATCACATACCCCAATCTGAACTGTGTCGTCGTTCTCACCCTCAGTTCGGTCATATTAGCCCTGAGTTCAAGTCACGACAAACCGATTGGATTAACAAAGGCGAAGTACTTCAAAGGCTTTTTCTCAACCGTAGGTGCAGGATTGATGTTCGCTCTTTACCTCCCTGTCATGGAGAAGATATACCAAAGAGTTAACTGCTACGCCATGGTAGTGGAAATGCAGCTGGTCATGGAGATAGCGGCGACGGTGTTGGCCACGGTGGGTATGGCAGCGGACGGCGGTTTCTCTGAGATGAAGAGGGAGAGCTTGAAGGTGTTCGATTTAGGACCGAAAGCGTACTGGCTGACGGTGGGGTTTAATGTGGTGACGTGGCAGGTGTGTTTCATGGGTACGGCAGGGATGGTGTTTTTGACGACGTCGTTAACTGGAGGTGTATGCATGACGGCGCTGATGGGGATAAACGTGTTGGGTGGAGTATTAGTTTACGGTGATTATTTCAGTGGGCTTAAAGCTGTGTCGACTTCGCTATGTGTATGGGGATTTTGTTCATATATTTACGGCATTTATATGAACATGAAGGAAGAAGACGAGAATAGCATAGAGAAGAATGTGAAGAAGATGAACAGTGATCATATTATGGAACTTGCAGAGATTGTTGTTACGCATAACGCCTCAGGGTGATCACGTGACATCTCTCTCTATTTTGTTTTCGTTTTATTCGAATATATTAGGGGTATTCTGGAGCTGGTTTATAACTGGCAAGTGTTTGTATTCAAGTTAAGTAATGGAAAAGTAAGGAGTAATGATTTATGGTTTTGACCAAAAACAAAAAATGGAA</genome_strand>
        <mrna_strand>GAATTCAGTGCTCGCTCTCTAAAAAGGCAAAGGTTTTCGTCTCATCTGTCACACAACACGACACACATTCTTCATCTTTTCTCCGCCGCTTCAAAAATTTTCATACAAAAACCAATTAGCTTTTCAGCAGAGAATTAATGGAGTTATCAGCTCAACAACCACCAGCAGCGCTTAACCAAAATCGACAGCAAGATCAACAGCAGGCCGCGTGGTTTATCAGAGCAGTACTGGCGAAGATCATCATGTATTGTAGCAACAACAAAGGTGGTACTGGCAGAGTAAGCACCAGATCCAAAATGCAAGCAGAAATGGGCAAGCGTTACTATATGATTTTACTGGTTATCAATTACATGTGTCTCTTCTTGGGTTCCGTTTCGTCTAGTCTGCTTTCGAAATTCTACTTCAATCACAAAGGTGGCAGTAGATGGGTTTCCACTTGGGTACAATGTGCTGGTTTTCCTCTTCTTCTATTCCCAATCTGCTTTTTCAGAATTTTCACCGACAGAAAATTGTTTTCTGGGTTCACCCCTAAAATCATCGCCCTCTCAATTCTCATCGGGTTGTTGTTGGGGGTTAACAATCTTCTTTTCTCTTGGGGGAATTCTTATCTTCCTGTTTCAACGAATTCTCTGGTTTTGTCTACTCAATTGGCCTTTACCCTCGTTACTTCCATGATTATCGTCAAGCAAAAAATCACATACCCCAATCTGAACTGTGTCGTCGTTCTCACCCTCAGTTCGGTCATATTAGCCCTGAGTTCAAGTCACGACAAACCGATTGGATTAACAAAGGCGAAGTACTTCAAAGGCTTTTTCTCAACCGTAGGTGCAGGATTGATGTTCGCTCTTTACCTCCCTGTCATGGAGAAGATATACCAAAGAGTTAACTGCTACGCCATGGTAGTGGAAATGCAGCTGGTCATGGAGATAGCGGCGACGGTGTTGGCCACGGTGGGTATGGCAGCGGACGGCGGTTTCTCTGAGATGAAGAGGGAGAGCTTGAAGGTGTTCGATTTAGGACCGAAAGCGTACTGGCTGACGGTGGGGTTTAATGTGGTGACGTGGCAGGTGTGTTTCATGGGTACGGCAGGGATGGTGTTTTTGACGACGTCGTTAACTGGAGGTGTATGCATGACGGCGCTGATGGGGATAAACGTGTTGGGTGGAGTATTAGTTTACGGTGATTATTTCAGTGGGCTTAAAGCTGTGTCGACTTCGCTATGTGTATGGGGATTTTGTTCATATATTTACGGCATTTATATGAACATGAAGGAAGAAGACGAGAATAGCATAGAGAAGAATGTGAAGAAGATGAACAGTGATCATATTATGGAACTTGCAGAGATTGTTGTTACGCATAACGCCTCAGGGTGATCACGTGACATCTCTCTCTATTTTGTTTTCGTTTTATTCGAATATATTAGGGGTATTCTGGAGCTGGTTTATAACTGGCAAGTGTTTGTATTCAAGTTAAGTAATGGAAAAGTAAGGAGTAATGATTTATGGTTTTGACCTAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E724432" ref_strand="+" ref_description="SGN-E724432 [FC24AD07]">
      <seq>atccctctttgacaaatttgaagatcaagaaatggacagctatggcggtggcgggtacttcgtcgacgagaaagccgttagggtcgaaaacatcttcttggagttcctcaagagttttcgagtggatgcgaactcacgtgagccattttacgagtcggagatcgaagccatgagacctaatgagtccaacacaatgttcattgatttctctcacgttatgcgcttcaacgatattcttcaaaaggccatttccgatgagtttctcaggtttgaatcctatctgaaaaatgcttgcaagagatttgtgatggaattgaagccaactttcatcactgatgataatcctaacaaggacatcaacgtcgcattttacaatcttccgctgattaatagattgagagagttgactacctcaaagatagggaaattggtgtcggtgactggagtggtaactcgtaccagtgaggtccgaccagagcttctacagggaaccttcaaatgcttggactgtggaactgtgatcaagaatgttgaacagcaattcaaatacaccgaggtttagtttcctagtcattcatctgtcaataagaggccatttttattgttgttgttgttggttcatgtttgtgcagtaattgaccttgttagttgtgaactctctcaaagatggagggtataccttttttttctaatgtaaagcacaatgggaacttatttcatgctatgattaacatttttaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="87305" stop="88883"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87605" g_stop="87718" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="87719" i_stop="87792" i_length="74">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="87793" g_stop="87945" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="267" r_length="153" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="87946" i_stop="88028" i_length="83">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.791" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88029" g_stop="88154" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="393" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88155" i_stop="88233" i_length="79">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.671" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88234" g_stop="88583" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="743" r_length="350" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E724432" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>743</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E724432" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87605" e_stop="87718"/>
          <exon e_start="87793" e_stop="87945"/>
          <exon e_start="88029" e_stop="88154"/>
          <exon e_start="88234" e_stop="88583"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCCTCTTTGAGAAATTTGAAGATCAAGAAATGGACAGCTATGGCGGTGGCGGGTACTTCGTCGACGAGAAAGCCGTTAGGGTCGAAAACATCTTCTTGGAGTTCCTCAAGAGGTTCAAATTTCTCTTTCAATTTGTATTGAACAATTTCTCCTTTTTTCTTTCTGGATCTAACATTGTGCTTTCAGTTTTCGAGTGGATGCGAACTCACGTGAGCCATTTTACGAGTCGGAGATCGAAGCCATGAGACCTAATGAGTCCAACACAATGTTCATTGATTTCTCTCACGTTATGCGCTTCAACGATATTCTTCAGAAGGCCATTTCCGATGAGTTTCTCAGGTATTTTTCTGTTGATATTGCTTTTTTACTGTGTATCTCGAAGAACAAGTAAAAAAGACTCAAACTTTGAATTTCGATTGTAGGTTTGAATCCTATCTGAAAAATGCTTGCAAGAGATTTGTGATGGAATTGAAGCCAACTTTCATCACTGATGATAATCCTAACAAGGACATCAACGTCGCATTTTACAATCTTCCGCTGATTAATAGGTTCGCTTCAATATTACGCTGCCCCCCTTTTATATGATTCTAGTTAATTGCCATTTGCTAATTTGAGAATTGGGCCCAGATTGAGAGAGTTGACTACCTCAGAGATAGGGAAATTGGTGTCGGTGACTGGAGTGGTAACTCGTACCAGTGAGGTCCGACCAGAGCTTCTACAGGGAACCTTCAAATGCTTGGACTGTGGAACTGTGATCAAGAATGTTGAACAGCAATTCAAATACACCGAGGTTTAGTTTCCTAGTCATTCATCTGTCAATAAGAGGCCATTTTTATTGTTGTTGTTGTTGGTTCATGTTTGTGCAGTAATTGACCTTGTTAGTTGTGAACTCTCTCAAAGATGGAGGGTATACCTTTTTTTTCTAATGTAAAGCACAATGGGAACTTATTTCATGCTATGATTAACAATATTAACAA</genome_strand>
        <mrna_strand>ATCCCTCTTTGACAAATTTGAAGATCAAGAAATGGACAGCTATGGCGGTGGCGGGTACTTCGTCGACGAGAAAGCCGTTAGGGTCGAAAACATCTTCTTGGAGTTCCTCAAGAG..........................................................................TTTTCGAGTGGATGCGAACTCACGTGAGCCATTTTACGAGTCGGAGATCGAAGCCATGAGACCTAATGAGTCCAACACAATGTTCATTGATTTCTCTCACGTTATGCGCTTCAACGATATTCTTCAAAAGGCCATTTCCGATGAGTTTCTCAG...................................................................................GTTTGAATCCTATCTGAAAAATGCTTGCAAGAGATTTGTGATGGAATTGAAGCCAACTTTCATCACTGATGATAATCCTAACAAGGACATCAACGTCGCATTTTACAATCTTCCGCTGATTAATAG...............................................................................ATTGAGAGAGTTGACTACCTCAAAGATAGGGAAATTGGTGTCGGTGACTGGAGTGGTAACTCGTACCAGTGAGGTCCGACCAGAGCTTCTACAGGGAACCTTCAAATGCTTGGACTGTGGAACTGTGATCAAGAATGTTGAACAGCAATTCAAATACACCGAGGTTTAGTTTCCTAGTCATTCATCTGTCAATAAGAGGCCATTTTTATTGTTGTTGTTGTTGGTTCATGTTTGTGCAGTAATTGACCTTGTTAGTTGTGAACTCTCTCAAAGATGGAGGGTATACCTTTTTTTTCTAATGTAAAGCACAATGGGAACTTATTTCATGCTATGATTAACATTTTTAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E347653" ref_strand="+" ref_description="SGN-E347653 [cTOF-26-F12]">
      <seq>aaatttgaagatcaagaaatggacagctatggcggtggcgggtacttcgtcgacgagaaagccgttagggtcgaaaacatcttcttggagttcctcaagagttttcgagtggatgcgaactcacgtgagccattttacgagtcggagatcgaagccatgagacctaatgagtccaacacaatgttcattgatttctctcacgttatgcgcttcaacgatattcttcagaaggccatttccgatgagtttctcaggtttgaatcctatctgaaaaatgcttgcaagagatttgtgatggaattgaagccaactttcatcactgatgataatcctaacaaggacatcaacgtcgcattttacaatcttccgctgattaatagattgagagagttgactacctcagagatagggaaattggtgtcggtgactggagtggtaactcgtaccagtgaggtccgaccagagcttctacagggaaccttcaaatgcttggactgtggaactgtgatcaagaatgttgaacagcaattcaaatacaccgagcctataatttgtatgaatgcgacatgtcaaaacaaagcaagatgggcattactcaggcaagagagcaaatttgcagactggcaganggtccgaatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="87318" stop="89186"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87618" g_stop="87718" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="101" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="87719" i_stop="87792" i_length="74">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="87793" g_stop="87945" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="254" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="87946" i_stop="88028" i_length="83">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.791" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88029" g_stop="88154" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="380" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88155" i_stop="88233" i_length="79">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.671" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88234" g_stop="88396" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="543" r_length="163" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="88397" i_stop="88789" i_length="393">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.796" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="88790" g_stop="88886" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="544" r_stop="640" r_length="97" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E347653" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E347653" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87618" e_stop="87718"/>
          <exon e_start="87793" e_stop="87945"/>
          <exon e_start="88029" e_stop="88154"/>
          <exon e_start="88234" e_stop="88396"/>
          <exon e_start="88790" e_stop="88886"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTTGAAGATCAAGAAATGGACAGCTATGGCGGTGGCGGGTACTTCGTCGACGAGAAAGCCGTTAGGGTCGAAAACATCTTCTTGGAGTTCCTCAAGAGGTTCAAATTTCTCTTTCAATTTGTATTGAACAATTTCTCCTTTTTTCTTTCTGGATCTAACATTGTGCTTTCAGTTTTCGAGTGGATGCGAACTCACGTGAGCCATTTTACGAGTCGGAGATCGAAGCCATGAGACCTAATGAGTCCAACACAATGTTCATTGATTTCTCTCACGTTATGCGCTTCAACGATATTCTTCAGAAGGCCATTTCCGATGAGTTTCTCAGGTATTTTTCTGTTGATATTGCTTTTTTACTGTGTATCTCGAAGAACAAGTAAAAAAGACTCAAACTTTGAATTTCGATTGTAGGTTTGAATCCTATCTGAAAAATGCTTGCAAGAGATTTGTGATGGAATTGAAGCCAACTTTCATCACTGATGATAATCCTAACAAGGACATCAACGTCGCATTTTACAATCTTCCGCTGATTAATAGGTTCGCTTCAATATTACGCTGCCCCCCTTTTATATGATTCTAGTTAATTGCCATTTGCTAATTTGAGAATTGGGCCCAGATTGAGAGAGTTGACTACCTCAGAGATAGGGAAATTGGTGTCGGTGACTGGAGTGGTAACTCGTACCAGTGAGGTCCGACCAGAGCTTCTACAGGGAACCTTCAAATGCTTGGACTGTGGAACTGTGATCAAGAATGTTGAACAGCAATTCAAATACACCGAGGTTTAGTTTCCTAGTCATTCATCTGTCAATAAGAGGCCATTTTTATTGTTGTTGTTGTTGGTTCATGTTTGTGCAGTAATTGACCTTGTTAGTTGTGAACTCTCTCAAAGATGGAGGGTATACCTTTTTTTTCTAATGTAAAGCACAATGGGAACTTATTTCATGCTATGATTAACAATATTAACAATTGTGTCAACCAATGCCTCAATTCAATAGCTCACAATTAACTACACCACAAAGTTGGATATTCCCAGAGGTGATCAAGAATAAGCTTGGGATCATGCACTGTTTTATCTAGTGATTTCTATATTCCATGTCTACCAATTTTACTACTTGCTATCTTGTCTCGAATGTTCATCACTCCTTTTTAATCTTATTGTTACGTCTCTGTAGCCTATAATTTGTATGAATGCGACATGTCAAAACAAAGCAAGATGGGCATTACTCAGGCAAGAGAGCAAATTTGCAGACTGGCAGAGGGTCCGAATGC</genome_strand>
        <mrna_strand>AAATTTGAAGATCAAGAAATGGACAGCTATGGCGGTGGCGGGTACTTCGTCGACGAGAAAGCCGTTAGGGTCGAAAACATCTTCTTGGAGTTCCTCAAGAG..........................................................................TTTTCGAGTGGATGCGAACTCACGTGAGCCATTTTACGAGTCGGAGATCGAAGCCATGAGACCTAATGAGTCCAACACAATGTTCATTGATTTCTCTCACGTTATGCGCTTCAACGATATTCTTCAGAAGGCCATTTCCGATGAGTTTCTCAG...................................................................................GTTTGAATCCTATCTGAAAAATGCTTGCAAGAGATTTGTGATGGAATTGAAGCCAACTTTCATCACTGATGATAATCCTAACAAGGACATCAACGTCGCATTTTACAATCTTCCGCTGATTAATAG...............................................................................ATTGAGAGAGTTGACTACCTCAGAGATAGGGAAATTGGTGTCGGTGACTGGAGTGGTAACTCGTACCAGTGAGGTCCGACCAGAGCTTCTACAGGGAACCTTCAAATGCTTGGACTGTGGAACTGTGATCAAGAATGTTGAACAGCAATTCAAATACACCGAG.........................................................................................................................................................................................................................................................................................................................................................................................................CCTATAATTTGTATGAATGCGACATGTCAAAACAAAGCAAGATGGGCATTACTCAGGCAAGAGAGCAAATTTGCAGACTGGCAGANGGTCCGAATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E279287" ref_strand="-" ref_description="SGN-E279287 [cLEL-4-B13](-)">
      <seq>gcacgaggcgggtacttcgtcgacgagaaagccgttagggtcgaaagcatcttcttggagttcctcaagagttttcgagtggatgcgaactcacgtgagccattttacgagtcggagatcgaagccatgagacctaatgagtccaacacaatgttcattgatttctctcacgttatgcgcttcaacgatattcttcagaaggccatttccgatgagtttctcaggtttgaatcctatctgaaaaatgcttgcaagagatttgtgatggaattgaagccaactttcatcactgatgataatcctaacaaggacatcaacgtcgcattttacaatcttccgctgattaatagattgagagagttgactacctcagagatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="87352" stop="88562"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87648" g_stop="87718" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="0.930"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="87719" i_stop="87792" i_length="74">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="87793" g_stop="87945" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="224" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="87946" i_stop="88028" i_length="83">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.791" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88029" g_stop="88154" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="350" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88155" i_stop="88233" i_length="79">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.671" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88234" g_stop="88262" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="379" r_length="29" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E279287" ref_strand="-">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>379</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E279287" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="87648" e_stop="87718"/>
          <exon e_start="87793" e_stop="87945"/>
          <exon e_start="88029" e_stop="88154"/>
          <exon e_start="88234" e_stop="88262"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCGGTGGCGGGTACTTCGTCGACGAGAAAGCCGTTAGGGTCGAAAACATCTTCTTGGAGTTCCTCAAGAGGTTCAAATTTCTCTTTCAATTTGTATTGAACAATTTCTCCTTTTTTCTTTCTGGATCTAACATTGTGCTTTCAGTTTTCGAGTGGATGCGAACTCACGTGAGCCATTTTACGAGTCGGAGATCGAAGCCATGAGACCTAATGAGTCCAACACAATGTTCATTGATTTCTCTCACGTTATGCGCTTCAACGATATTCTTCAGAAGGCCATTTCCGATGAGTTTCTCAGGTATTTTTCTGTTGATATTGCTTTTTTACTGTGTATCTCGAAGAACAAGTAAAAAAGACTCAAACTTTGAATTTCGATTGTAGGTTTGAATCCTATCTGAAAAATGCTTGCAAGAGATTTGTGATGGAATTGAAGCCAACTTTCATCACTGATGATAATCCTAACAAGGACATCAACGTCGCATTTTACAATCTTCCGCTGATTAATAGGTTCGCTTCAATATTACGCTGCCCCCCTTTTATATGATTCTAGTTAATTGCCATTTGCTAATTTGAGAATTGGGCCCAGATTGAGAGAGTTGACTACCTCAGAGATAG</genome_strand>
        <mrna_strand>GCACGAGGCGGGTACTTCGTCGACGAGAAAGCCGTTAGGGTCGAAAGCATCTTCTTGGAGTTCCTCAAGAG..........................................................................TTTTCGAGTGGATGCGAACTCACGTGAGCCATTTTACGAGTCGGAGATCGAAGCCATGAGACCTAATGAGTCCAACACAATGTTCATTGATTTCTCTCACGTTATGCGCTTCAACGATATTCTTCAGAAGGCCATTTCCGATGAGTTTCTCAG...................................................................................GTTTGAATCCTATCTGAAAAATGCTTGCAAGAGATTTGTGATGGAATTGAAGCCAACTTTCATCACTGATGATAATCCTAACAAGGACATCAACGTCGCATTTTACAATCTTCCGCTGATTAATAG...............................................................................ATTGAGAGAGTTGACTACCTCAGAGATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E374565" ref_strand="-" ref_description="SGN-E374565 [TUS-15-F15](-)">
      <seq>ctagttctctccatgacattgtggaacaagccagagcaggtgacacggtcatatttactggtaccgttgtggtgatacctgacatacttgcacttgcctctcctggggagagagctgaatgtcgccgtgatgcatctcagcgaaagaatggtactggtgcgcaagaaggtgtgaagggtcttcgagccttgggcgttagggatctctcgtatcgattagcatttatagctaactcggttcagatatgtgatggtcgaagggacaatgacatcagaaatagaaggagagatgttgatgaagaagagagtccccagttcatgactgaagagctagaagacatccaacgaatgaggaaagttccggattttttcaataagcttgttgagagtgttgctccaactgtttttggtcactcagatatcaagagggcaatactgctcatgcttttgggtggtgttcacaagtttactcatgaaggcattaatttaagaggggacatcaatgtttgcattgttggagatcctagctgtgcaaaatctcagttcctcaaatacacagcaggtctggttcctcgatctgtctatacatcagggaaatcctcgtctgctgctgggttgacagcaacagtggccaaagaaccagaaactggagaattctgtattgaggctggtgcactgatgcttgcagacaatggtatctgttgtattgatgaatttgacaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="88638" stop="91073"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88937" g_stop="88983" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="0.894"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88984" i_stop="89071" i_length="88">
            <donor d_prob="1.000" d_score="0.89"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89072" g_stop="89267" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="242" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89268" i_stop="89459" i_length="192">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89460" g_stop="89537" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="320" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89538" i_stop="89957" i_length="420">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="89958" g_stop="90187" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="550" r_length="230" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="90188" i_stop="90271" i_length="84">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="90272" g_stop="90386" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="551" r_stop="665" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="90387" i_stop="90714" i_length="328">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="90715" g_stop="90773" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="666" r_stop="724" r_length="59" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E374565" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>725</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E374565" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="88937" e_stop="88983"/>
          <exon e_start="89072" e_stop="89267"/>
          <exon e_start="89460" e_stop="89537"/>
          <exon e_start="89958" e_stop="90187"/>
          <exon e_start="90272" e_stop="90386"/>
          <exon e_start="90715" e_stop="90773"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCATTCTACGCCATGACATTGTGGAACAAGCCAGAGCAGGTGACACGTAAGTACAATTACTTTATACTAGTAGAGTAACCTAGTACTTAACTCGGATATGTTGCATTCTCATTGGTGTTCCTACTCTGTTGCAGGGTCATATTTACTGGTACCGTTGTGGTGATACCTGACATACTTGCACTTGCCTCTCCTGGGGAGAGAGCTGAATGTCGCCGTGATGCATCTCAGCGAAAGAATGGTACTGGTGCGCAAGAAGGTGTGAAGGGTCTTCGAGCCTTGGGCGTTAGGGATCTCTCGTATCGATTAGCATTTATAGCTAACTCGGTTCAGGTTAGTGACACTTTCAGATTAGATAACTTCTATTTTTGACTGGGATCCGATAAAGGAACATCTCCTGTTGATTCCTTAATGTAAACATCTTAGAAGTTGAATGAATATACAATTTGTTTGGAAATGCAGTCTTTTTTCTACTCTTTACTGTGCATTTTACATAATGATATTGTATTCATCTCCTTTACTCAGATATGTGATGGTCGAAGGGACAATGACATCAGAAATAGAAGGAGAGATGTTGATGAAGAAGAGAGTCCCCAGTTCATGGTTGGTCTTTCTTTCATCTTTTTTCACTTTTCATCAAACAAAAATTATAACTAGAGTATCTGGTTATATTTCTGTATGCATAGCTTCATTTTATATGGTTCATAAAATCAATCACATTGGGTAACTTCGTGCTATAAAACTTTGGATATATATCAACACATCCATAGCCAATAAGATATGATAAAATTGTTACATGTTTTAGGGAGGAGGGGAGAAGAAAATTTGGGTCAGACTTAGTCAGTCAGGCTCATCCTTGTGTATATACTATAGAAGGCTATACTATAGAAGGCTATGGCCCGTAGTCCATGAATATGTAACAATCGCATTGCAGTATGCAAGCTCCTTCTCTTTTACTAATGTGCTCGTCAAATTTTTAATATACTCAACTGACTCAGTTTTGGTCACTCACTCAATTGGCAGACTGAAGAGCTAGAAGACATCCAACGAATGAGGAAAGTTCCGGATTTTTTCAATAAGCTTGTTGAGAGTGTTGCTCCAACTGTTTTTGGTCACTCAGATATCAAGAGGGCAATACTGCTCATGCTTTTGGGTGGTGTTCACAAGTTTACTCATGAAGGCATTAATTTAAGAGGGGACATCAATGTTTGCATTGTTGGAGATCCTAGCTGTGCAAAATCTCAGTTCCTCAAGTGTGTTTTCTTCTCTTCTTTCTAATTTCTTCAACTGGTTTCCGAGCAAATGAATTAACTTCTGCTACGTCATATATTGCCTAGATACACAGCAGGTCTGGTTCCTCGATCTGTCTATACATCAGGGAAATCCTCGTCTGCTGCTGGGTTGACAGCAACAGTGGCCAAAGAACCAGAAACTGGAGAATTCTGTATTGAGGTAGCTTGCAACTTTCTCGTCTCGTTACAAAAATGGGTAATTTGTTGTACGGAGTATAAAATAGGTTAAGTTGCATCAGCAAGTCTAGAAGATGTCATCTGTGATGACATTGAACAATTAATTGCCTGTGACTGTTATCTGCACTCCAAGTGCATGATGCACTGGGGGGGGGGGGGTCTGTGCAAATTAATCTTGAAATGAGTTAACTCTCTCTAGACAAATTAATTCTTCTTACTTTTTTTCTACTATATTTGGATTTCTTTTCAGTATATTTTTATCATCTTAAATTCTATCCCATATCCTATTAAGTTTTCTTCATGCCTTTTAGGCTGGTGCACTGATGCTTGCAGACAATGGTATCTGTTGTATTGATGAATTTGACAAAAT</genome_strand>
        <mrna_strand>CTAGTTCT-CTCCATGACATTGTGGAACAAGCCAGAGCAGGTGACAC........................................................................................GGTCATATTTACTGGTACCGTTGTGGTGATACCTGACATACTTGCACTTGCCTCTCCTGGGGAGAGAGCTGAATGTCGCCGTGATGCATCTCAGCGAAAGAATGGTACTGGTGCGCAAGAAGGTGTGAAGGGTCTTCGAGCCTTGGGCGTTAGGGATCTCTCGTATCGATTAGCATTTATAGCTAACTCGGTTCAG................................................................................................................................................................................................ATATGTGATGGTCGAAGGGACAATGACATCAGAAATAGAAGGAGAGATGTTGATGAAGAAGAGAGTCCCCAGTTCATG....................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAAGAGCTAGAAGACATCCAACGAATGAGGAAAGTTCCGGATTTTTTCAATAAGCTTGTTGAGAGTGTTGCTCCAACTGTTTTTGGTCACTCAGATATCAAGAGGGCAATACTGCTCATGCTTTTGGGTGGTGTTCACAAGTTTACTCATGAAGGCATTAATTTAAGAGGGGACATCAATGTTTGCATTGTTGGAGATCCTAGCTGTGCAAAATCTCAGTTCCTCAA....................................................................................ATACACAGCAGGTCTGGTTCCTCGATCTGTCTATACATCAGGGAAATCCTCGTCTGCTGCTGGGTTGACAGCAACAGTGGCCAAAGAACCAGAAACTGGAGAATTCTGTATTGAG........................................................................................................................................................................................................................................................................................................................................GCTGGTGCACTGATGCTTGCAGACAATGGTATCTGTTGTATTGATGAATTTGACAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E314603" ref_strand="-" ref_description="SGN-E314603 [cTOA-20-O12]">
      <seq>ttccaaaatgagaatccccgaggatggtgtnggtgatactcaaaatggtactggtcaaaggaaactgancccaactgaagctccggctgagtcagtatctgggaatgcagaaaatggtgctggaactacaaacaagcaaggaaagaaactagtcattactgatgaatatttccagagagtcacccgtgctcttattctgcgattgaggcagcatgaagagactgtaatgcaagacgggactggattagctggaatgaggcagaaagatcttatacagtggtacgtgagtcagcagaatgataagaatagctacagctccatggaagaggcagcagccgaagtcacgaaagtgaaagctattatagagagcttgattcgaagagaaggccatttgatagttgtagatgatggtacgcaagcaggcgaggaaagtggaaggcaatcagcatccagaaacgaccggattttagcagtggctcccaattatgttgtagattgatttggaattcttgtgaacaggacagaaaatctggggctgtttgagcgcaatggcagcgcggcctaaagttgtaggactggggaactgtgtttttctactgtcatagctgagaaatcttacaccctttgtgggaatgttctactatacgagactaacttgttttaagttaaactaattgttgtacttgagtttgagaatgtgaagttatcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="91593" stop="93363"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91893" g_stop="92001" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="0.936"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92002" i_stop="92089" i_length="88">
            <donor d_prob="0.990" d_score="0.94"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92090" g_stop="92215" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="236" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92216" i_stop="92498" i_length="283">
            <donor d_prob="0.312" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92499" g_stop="92629" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="367" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="92630" i_stop="92719" i_length="90">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92720" g_stop="93063" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="711" r_length="344" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E314603" ref_strand="-">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>710</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E314603" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="91893" e_stop="92001"/>
          <exon e_start="92090" e_stop="92215"/>
          <exon e_start="92499" e_stop="92629"/>
          <exon e_start="92720" e_stop="93063"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCAAAATGAGAATCC-CGAGGATGGTGTTGGTGATACTCAAAATGGTACTGGTCAAAGGGAAACTGAA-CCAACTGAAGCTCCGGCTGAGTCAGTATCTGGGAATGCAGGTATGCAATATTCAATTGGTTGTTTTGTAGGATCTGATTTCAAAATTCATAGACTTCTTGTGTCTTAATTTGGTTATCCATGGTGTAGAAAATGGTGCTGGAACTACAAACAAGCAAGGAAAGAAACTAGTCATTACTGATGAATATTTCCAGAGAGTCACCCGTGCTCTTATTCTGCGATTGAGGCAGCATGAAGAGACTGTAATGCAAGACGGTAAGTCAGCGCGTACAAATTTTACAGATTCTTTTGCTTAGGGTTGTTAGCAAAAGTTGAATTGAAGTTCTACAATGCTTTGTTTCAATGACATTAAATTTTCTGTGTGATATGATATATGGAGAAATAATGAAATAGGGACACAACAAATAGGACCAGTAGGATCAAGTAATACAAGCTTGAAAAACATTCATTTGCTAGGGGAGAATTCAGTTTTAATCCAAGTGAAGACATTTTTCTGTTGTGGAATGTGGAACGCTCATAAACATTTATACACCTGTAGGGACTGGATTAGCTGGAATGAGGCAGAAAGATCTTATACAGTGGTACGTGAGTCAGCAGAATGATAAGAATAGCTACAGCTCCATGGAAGAGGCAGCAGCCGAAGTCACGAAAGTGAAAGCTATTATAGAGGTAACCTTGGATATTTATGCATTTTTAATGGTCTTGATAAATATATGCCCTATGCTCAACTGTTATTTGGACCATATTTATGTTGGACAGAGCTTGATTCGAAGAGAAGGCCATTTGATAGTTGTAGATGATGGTACGCAAGCAGGCGAGGAAAGTGGAAGGCAATCAGCATCCAGAAACGACCGGATTTTAGCAGTGGCTCCCAATTATGTTGTAGATTGATTTGGAATTCTTGTGAACAGGACAGAAAATCTGGGGCTGTTTGAGCGCAATGGCAGCGCGGCCTAAAGTTGTAGGACTGGGGAACTGTGTTTTTCTACTGTCATAGCTGAGAAATCTTACACCCTTTGTGGGAATGTTCTACTATACGAGACTAACTTGTTTTAAGTTAAACTAATTGTTGTACTTGAGTTTGAGAATGTGAAGTTATCAAG</genome_strand>
        <mrna_strand>TTCCAAAATGAGAATCCCCGAGGATGGTGTNGGTGATACTCAAAATGGTACTGGTCAAA-GGAAACTGANCCCAACTGAAGCTCCGGCTGAGTCAGTATCTGGGAATGCAG........................................................................................AAAATGGTGCTGGAACTACAAACAAGCAAGGAAAGAAACTAGTCATTACTGATGAATATTTCCAGAGAGTCACCCGTGCTCTTATTCTGCGATTGAGGCAGCATGAAGAGACTGTAATGCAAGACG...........................................................................................................................................................................................................................................................................................GGACTGGATTAGCTGGAATGAGGCAGAAAGATCTTATACAGTGGTACGTGAGTCAGCAGAATGATAAGAATAGCTACAGCTCCATGGAAGAGGCAGCAGCCGAAGTCACGAAAGTGAAAGCTATTATAGAG..........................................................................................AGCTTGATTCGAAGAGAAGGCCATTTGATAGTTGTAGATGATGGTACGCAAGCAGGCGAGGAAAGTGGAAGGCAATCAGCATCCAGAAACGACCGGATTTTAGCAGTGGCTCCCAATTATGTTGTAGATTGATTTGGAATTCTTGTGAACAGGACAGAAAATCTGGGGCTGTTTGAGCGCAATGGCAGCGCGGCCTAAAGTTGTAGGACTGGGGAACTGTGTTTTTCTACTGTCATAGCTGAGAAATCTTACACCCTTTGTGGGAATGTTCTACTATACGAGACTAACTTGTTTTAAGTTAAACTAATTGTTGTACTTGAGTTTGAGAATGTGAAGTTATCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E374566" ref_strand="-" ref_description="SGN-E374566 [TUS-15-F15]">
      <seq>ctccggctgagtcagtatctgggaatgcagaaaatggtgctggaactacaaacaagcaaggaaagaaactagtcattactgatgaatatttccagagagtcacccgtgctcttattctgcgattgaggcagcatgaagagactgtaatgcaagacgggactggattagctggaatgaggcagaaagatcttatacagtggtacgtgagtcagcagaatgataagaatagctacagctccatggaagaggcagcagccgaagtcacgaaagtgaaagctattatagagagcttgattcgaagagaaggccatttgatagttgtagatgatggtacgcaagcaggcgaggaaagtggaaggcaatcagcatccagaaacgaccggattttagcagtggctcccaattatgttgtagattgatttggaattcttgtgaacaggacagaaaatctggggctgtttgagcgcaatggcagcgcggcctaaagttgtaggactggggaactgtgtttttctactgtcatagctgagaaatcttacaccctttgtgggaatgttctactatacgagactaacttgttttaagttaaactaattgttgtacttgagtttgagaatgtgaagttatcaagcctacctgtactagtattagttttgagtttgcttatgttcaatgtagtatcaactggtattagtcttctggattcattaatggtacatttttaattaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="91672" stop="93462"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91972" g_stop="92001" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92002" i_stop="92089" i_length="88">
            <donor d_prob="0.990" d_score="0.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92090" g_stop="92215" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="156" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92216" i_stop="92498" i_length="283">
            <donor d_prob="0.312" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92499" g_stop="92629" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="287" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="92630" i_stop="92719" i_length="90">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92720" g_stop="93162" g_length="443"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="730" r_length="443" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E374566" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>730</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E374566" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="91972" e_stop="92001"/>
          <exon e_start="92090" e_stop="92215"/>
          <exon e_start="92499" e_stop="92629"/>
          <exon e_start="92720" e_stop="93162"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCGGCTGAGTCAGTATCTGGGAATGCAGGTATGCAATATTCAATTGGTTGTTTTGTAGGATCTGATTTCAAAATTCATAGACTTCTTGTGTCTTAATTTGGTTATCCATGGTGTAGAAAATGGTGCTGGAACTACAAACAAGCAAGGAAAGAAACTAGTCATTACTGATGAATATTTCCAGAGAGTCACCCGTGCTCTTATTCTGCGATTGAGGCAGCATGAAGAGACTGTAATGCAAGACGGTAAGTCAGCGCGTACAAATTTTACAGATTCTTTTGCTTAGGGTTGTTAGCAAAAGTTGAATTGAAGTTCTACAATGCTTTGTTTCAATGACATTAAATTTTCTGTGTGATATGATATATGGAGAAATAATGAAATAGGGACACAACAAATAGGACCAGTAGGATCAAGTAATACAAGCTTGAAAAACATTCATTTGCTAGGGGAGAATTCAGTTTTAATCCAAGTGAAGACATTTTTCTGTTGTGGAATGTGGAACGCTCATAAACATTTATACACCTGTAGGGACTGGATTAGCTGGAATGAGGCAGAAAGATCTTATACAGTGGTACGTGAGTCAGCAGAATGATAAGAATAGCTACAGCTCCATGGAAGAGGCAGCAGCCGAAGTCACGAAAGTGAAAGCTATTATAGAGGTAACCTTGGATATTTATGCATTTTTAATGGTCTTGATAAATATATGCCCTATGCTCAACTGTTATTTGGACCATATTTATGTTGGACAGAGCTTGATTCGAAGAGAAGGCCATTTGATAGTTGTAGATGATGGTACGCAAGCAGGCGAGGAAAGTGGAAGGCAATCAGCATCCAGAAACGACCGGATTTTAGCAGTGGCTCCCAATTATGTTGTAGATTGATTTGGAATTCTTGTGAACAGGACAGAAAATCTGGGGCTGTTTGAGCGCAATGGCAGCGCGGCCTAAAGTTGTAGGACTGGGGAACTGTGTTTTTCTACTGTCATAGCTGAGAAATCTTACACCCTTTGTGGGAATGTTCTACTATACGAGACTAACTTGTTTTAAGTTAAACTAATTGTTGTACTTGAGTTTGAGAATGTGAAGTTATCAAGCCTACCTGTACTAGTATTAGTTTTGAGTTTGCTTATGTTCAATGTAGTATCAACTGGTATTAGTCTTCTGGATTCATTAATGGTACATTTTTAATTAGA</genome_strand>
        <mrna_strand>CTCCGGCTGAGTCAGTATCTGGGAATGCAG........................................................................................AAAATGGTGCTGGAACTACAAACAAGCAAGGAAAGAAACTAGTCATTACTGATGAATATTTCCAGAGAGTCACCCGTGCTCTTATTCTGCGATTGAGGCAGCATGAAGAGACTGTAATGCAAGACG...........................................................................................................................................................................................................................................................................................GGACTGGATTAGCTGGAATGAGGCAGAAAGATCTTATACAGTGGTACGTGAGTCAGCAGAATGATAAGAATAGCTACAGCTCCATGGAAGAGGCAGCAGCCGAAGTCACGAAAGTGAAAGCTATTATAGAG..........................................................................................AGCTTGATTCGAAGAGAAGGCCATTTGATAGTTGTAGATGATGGTACGCAAGCAGGCGAGGAAAGTGGAAGGCAATCAGCATCCAGAAACGACCGGATTTTAGCAGTGGCTCCCAATTATGTTGTAGATTGATTTGGAATTCTTGTGAACAGGACAGAAAATCTGGGGCTGTTTGAGCGCAATGGCAGCGCGGCCTAAAGTTGTAGGACTGGGGAACTGTGTTTTTCTACTGTCATAGCTGAGAAATCTTACACCCTTTGTGGGAATGTTCTACTATACGAGACTAACTTGTTTTAAGTTAAACTAATTGTTGTACTTGAGTTTGAGAATGTGAAGTTATCAAGCCTACCTGTACTAGTATTAGTTTTGAGTTTGCTTATGTTCAATGTAGTATCAACTGGTATTAGTCTTCTGGATTCATTAATGGTACATTTTTAATTAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E715345" ref_strand="+" ref_description="SGN-E715345 [FB14AA12]">
      <seq>gataatggtgctggaactacaaacaagcaaggaaagaaactagtcattactgatgaatatttccagagagtcacccgtgctcttattctgcgattgaggcagcatgaagagactgtaatgcaagacgggactggattagctggaatgaggcagaaagatcttatacagtggtacgtgagtcagcagaatgataagaatagctacagctccatggaagaggcagcagccgaagtcacgaaagtgaaagctattatagagagcttgattcgaagagaaggccatttgatagttgtagatgatggtacgcaagcaggcgaggaaagtggaaggcaatcagcatccagaaacgaccggattttagcagtggctcccaattatgttgtagattgatttggaattcttgtgaacaggacagaaaatctggggctgtttgagcgcaatggcagcgcggcctaaagttgtaggactggggaactgtgtttttctactgtcatagctgagaaatcttacaccctttgtgggaatgttctactatacgagactaacttgttttaagttaaactaattgttgtacttgagtttgagaatgtgaagttatcaagcctacctgtactagtattagttttgagtttgcttatgttcaatgtagtatcaactggtattagtcttctggattcattaatggtacatttttaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="91789" stop="93458"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92089" g_stop="92215" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="127" r_length="127" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92216" i_stop="92498" i_length="283">
            <donor d_prob="0.312" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92499" g_stop="92629" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="258" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92630" i_stop="92719" i_length="90">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92720" g_stop="93158" g_length="439"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="697" r_length="439" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E715345" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E715345" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92089" e_stop="92215"/>
          <exon e_start="92499" e_stop="92629"/>
          <exon e_start="92720" e_stop="93158"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAATGGTGCTGGAACTACAAACAAGCAAGGAAAGAAACTAGTCATTACTGATGAATATTTCCAGAGAGTCACCCGTGCTCTTATTCTGCGATTGAGGCAGCATGAAGAGACTGTAATGCAAGACGGTAAGTCAGCGCGTACAAATTTTACAGATTCTTTTGCTTAGGGTTGTTAGCAAAAGTTGAATTGAAGTTCTACAATGCTTTGTTTCAATGACATTAAATTTTCTGTGTGATATGATATATGGAGAAATAATGAAATAGGGACACAACAAATAGGACCAGTAGGATCAAGTAATACAAGCTTGAAAAACATTCATTTGCTAGGGGAGAATTCAGTTTTAATCCAAGTGAAGACATTTTTCTGTTGTGGAATGTGGAACGCTCATAAACATTTATACACCTGTAGGGACTGGATTAGCTGGAATGAGGCAGAAAGATCTTATACAGTGGTACGTGAGTCAGCAGAATGATAAGAATAGCTACAGCTCCATGGAAGAGGCAGCAGCCGAAGTCACGAAAGTGAAAGCTATTATAGAGGTAACCTTGGATATTTATGCATTTTTAATGGTCTTGATAAATATATGCCCTATGCTCAACTGTTATTTGGACCATATTTATGTTGGACAGAGCTTGATTCGAAGAGAAGGCCATTTGATAGTTGTAGATGATGGTACGCAAGCAGGCGAGGAAAGTGGAAGGCAATCAGCATCCAGAAACGACCGGATTTTAGCAGTGGCTCCCAATTATGTTGTAGATTGATTTGGAATTCTTGTGAACAGGACAGAAAATCTGGGGCTGTTTGAGCGCAATGGCAGCGCGGCCTAAAGTTGTAGGACTGGGGAACTGTGTTTTTCTACTGTCATAGCTGAGAAATCTTACACCCTTTGTGGGAATGTTCTACTATACGAGACTAACTTGTTTTAAGTTAAACTAATTGTTGTACTTGAGTTTGAGAATGTGAAGTTATCAAGCCTACCTGTACTAGTATTAGTTTTGAGTTTGCTTATGTTCAATGTAGTATCAACTGGTATTAGTCTTCTGGATTCATTAATGGTACATTTTTAAT</genome_strand>
        <mrna_strand>GATAATGGTGCTGGAACTACAAACAAGCAAGGAAAGAAACTAGTCATTACTGATGAATATTTCCAGAGAGTCACCCGTGCTCTTATTCTGCGATTGAGGCAGCATGAAGAGACTGTAATGCAAGACG...........................................................................................................................................................................................................................................................................................GGACTGGATTAGCTGGAATGAGGCAGAAAGATCTTATACAGTGGTACGTGAGTCAGCAGAATGATAAGAATAGCTACAGCTCCATGGAAGAGGCAGCAGCCGAAGTCACGAAAGTGAAAGCTATTATAGAG..........................................................................................AGCTTGATTCGAAGAGAAGGCCATTTGATAGTTGTAGATGATGGTACGCAAGCAGGCGAGGAAAGTGGAAGGCAATCAGCATCCAGAAACGACCGGATTTTAGCAGTGGCTCCCAATTATGTTGTAGATTGATTTGGAATTCTTGTGAACAGGACAGAAAATCTGGGGCTGTTTGAGCGCAATGGCAGCGCGGCCTAAAGTTGTAGGACTGGGGAACTGTGTTTTTCTACTGTCATAGCTGAGAAATCTTACACCCTTTGTGGGAATGTTCTACTATACGAGACTAACTTGTTTTAAGTTAAACTAATTGTTGTACTTGAGTTTGAGAATGTGAAGTTATCAAGCCTACCTGTACTAGTATTAGTTTTGAGTTTGCTTATGTTCAATGTAGTATCAACTGGTATTAGTCTTCTGGATTCATTAATGGTACATTTTTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E717103" ref_strand="+" ref_description="SGN-E717103 [FB18DG05]">
      <seq>gaaaatggtgctggaactacaaacaagcaaggaaagaaactagtcattactgatgaatatttccagagagtcacccgtgctcttattctgcgattgaggcagcatgaagagactgtaatgcaagacgggactggattagctggaatgaggcagaaagatcttatacagtggtacgtgagtcagcagaatgataagaatagctacagctccatggaagaggcagcagccgaagtcacgaaagtgaaagctattatagagagcttgattcgaagagaaggccatttgatagttgtagatgatggtacgcaagcaggcgaggaaagtggaaggcaatcagcatccagaaacgaccggattttagcagtggctcccaattatgttgtagattgatttggaattcttgtgaacaggacagaaaatctggggctgtttgagcgcaatggcagcgcggcctaaagttgtaggactggggaactgtgtttttctactgtcatagctgagaaatcttacaccctttgtgggaatgttctactatacgagactaacttgttttaagttaaactaattgttgtacttgagtttgagaatgtgaagttatcaagcctacctgtactagtattagttttgagtttgcttatgttcaatgtagtatcaactggtattagtcttctggattcattaatggtacattttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="91789" stop="93455"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92089" g_stop="92215" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="127" r_length="127" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92216" i_stop="92498" i_length="283">
            <donor d_prob="0.312" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92499" g_stop="92629" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="258" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92630" i_stop="92719" i_length="90">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92720" g_stop="93155" g_length="436"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="694" r_length="436" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E717103" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>694</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E717103" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92089" e_stop="92215"/>
          <exon e_start="92499" e_stop="92629"/>
          <exon e_start="92720" e_stop="93155"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAATGGTGCTGGAACTACAAACAAGCAAGGAAAGAAACTAGTCATTACTGATGAATATTTCCAGAGAGTCACCCGTGCTCTTATTCTGCGATTGAGGCAGCATGAAGAGACTGTAATGCAAGACGGTAAGTCAGCGCGTACAAATTTTACAGATTCTTTTGCTTAGGGTTGTTAGCAAAAGTTGAATTGAAGTTCTACAATGCTTTGTTTCAATGACATTAAATTTTCTGTGTGATATGATATATGGAGAAATAATGAAATAGGGACACAACAAATAGGACCAGTAGGATCAAGTAATACAAGCTTGAAAAACATTCATTTGCTAGGGGAGAATTCAGTTTTAATCCAAGTGAAGACATTTTTCTGTTGTGGAATGTGGAACGCTCATAAACATTTATACACCTGTAGGGACTGGATTAGCTGGAATGAGGCAGAAAGATCTTATACAGTGGTACGTGAGTCAGCAGAATGATAAGAATAGCTACAGCTCCATGGAAGAGGCAGCAGCCGAAGTCACGAAAGTGAAAGCTATTATAGAGGTAACCTTGGATATTTATGCATTTTTAATGGTCTTGATAAATATATGCCCTATGCTCAACTGTTATTTGGACCATATTTATGTTGGACAGAGCTTGATTCGAAGAGAAGGCCATTTGATAGTTGTAGATGATGGTACGCAAGCAGGCGAGGAAAGTGGAAGGCAATCAGCATCCAGAAACGACCGGATTTTAGCAGTGGCTCCCAATTATGTTGTAGATTGATTTGGAATTCTTGTGAACAGGACAGAAAATCTGGGGCTGTTTGAGCGCAATGGCAGCGCGGCCTAAAGTTGTAGGACTGGGGAACTGTGTTTTTCTACTGTCATAGCTGAGAAATCTTACACCCTTTGTGGGAATGTTCTACTATACGAGACTAACTTGTTTTAAGTTAAACTAATTGTTGTACTTGAGTTTGAGAATGTGAAGTTATCAAGCCTACCTGTACTAGTATTAGTTTTGAGTTTGCTTATGTTCAATGTAGTATCAACTGGTATTAGTCTTCTGGATTCATTAATGGTACATTTTT</genome_strand>
        <mrna_strand>GAAAATGGTGCTGGAACTACAAACAAGCAAGGAAAGAAACTAGTCATTACTGATGAATATTTCCAGAGAGTCACCCGTGCTCTTATTCTGCGATTGAGGCAGCATGAAGAGACTGTAATGCAAGACG...........................................................................................................................................................................................................................................................................................GGACTGGATTAGCTGGAATGAGGCAGAAAGATCTTATACAGTGGTACGTGAGTCAGCAGAATGATAAGAATAGCTACAGCTCCATGGAAGAGGCAGCAGCCGAAGTCACGAAAGTGAAAGCTATTATAGAG..........................................................................................AGCTTGATTCGAAGAGAAGGCCATTTGATAGTTGTAGATGATGGTACGCAAGCAGGCGAGGAAAGTGGAAGGCAATCAGCATCCAGAAACGACCGGATTTTAGCAGTGGCTCCCAATTATGTTGTAGATTGATTTGGAATTCTTGTGAACAGGACAGAAAATCTGGGGCTGTTTGAGCGCAATGGCAGCGCGGCCTAAAGTTGTAGGACTGGGGAACTGTGTTTTTCTACTGTCATAGCTGAGAAATCTTACACCCTTTGTGGGAATGTTCTACTATACGAGACTAACTTGTTTTAAGTTAAACTAATTGTTGTACTTGAGTTTGAGAATGTGAAGTTATCAAGCCTACCTGTACTAGTATTAGTTTTGAGTTTGCTTATGTTCAATGTAGTATCAACTGGTATTAGTCTTCTGGATTCATTAATGGTACATTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E353902" ref_strand="+" ref_description="SGN-E353902 [cTOS-10-M18]">
      <seq>tcacccgtgctcttattctgcgattgaggcagcatgaagagactgtaatgcaagacgggactggattagctggaatgaggcagaaagatcttatacagtggtacgtgagtcagcagaatgataagaatagctacagctccatggaagaggcagcagccgaagtcacgaaagtgaaagctattatagagagcttgattcgaagagaaggccatttgatagttgtagatgatggtacgcaagcaggcgaggaaagtggaaggcaatcagcatccagaaacgaccggattttagcagtggctcccaattatgttgtagattgatttggaattcttgtgaacaggacagaaaatctggggctgtttgagcgcaatggcagcgcggcctaaagttgtaggactggggaactgtgtttttctactgtcatagctgagaaatcttacaccctttgtgggaatgttctactatacgagactaacttgttttaagttaaactaattgttgtacttgagtttgagaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="91859" stop="93348"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92159" g_stop="92215" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92216" i_stop="92498" i_length="283">
            <donor d_prob="0.312" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92499" g_stop="92629" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="188" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92630" i_stop="92719" i_length="90">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92720" g_stop="93047" g_length="328"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="516" r_length="328" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="517" polyA_stop="535"/>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E353902" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E353902" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92159" e_stop="92215"/>
          <exon e_start="92499" e_stop="92629"/>
          <exon e_start="92720" e_stop="93047"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACCCGTGCTCTTATTCTGCGATTGAGGCAGCATGAAGAGACTGTAATGCAAGACGGTAAGTCAGCGCGTACAAATTTTACAGATTCTTTTGCTTAGGGTTGTTAGCAAAAGTTGAATTGAAGTTCTACAATGCTTTGTTTCAATGACATTAAATTTTCTGTGTGATATGATATATGGAGAAATAATGAAATAGGGACACAACAAATAGGACCAGTAGGATCAAGTAATACAAGCTTGAAAAACATTCATTTGCTAGGGGAGAATTCAGTTTTAATCCAAGTGAAGACATTTTTCTGTTGTGGAATGTGGAACGCTCATAAACATTTATACACCTGTAGGGACTGGATTAGCTGGAATGAGGCAGAAAGATCTTATACAGTGGTACGTGAGTCAGCAGAATGATAAGAATAGCTACAGCTCCATGGAAGAGGCAGCAGCCGAAGTCACGAAAGTGAAAGCTATTATAGAGGTAACCTTGGATATTTATGCATTTTTAATGGTCTTGATAAATATATGCCCTATGCTCAACTGTTATTTGGACCATATTTATGTTGGACAGAGCTTGATTCGAAGAGAAGGCCATTTGATAGTTGTAGATGATGGTACGCAAGCAGGCGAGGAAAGTGGAAGGCAATCAGCATCCAGAAACGACCGGATTTTAGCAGTGGCTCCCAATTATGTTGTAGATTGATTTGGAATTCTTGTGAACAGGACAGAAAATCTGGGGCTGTTTGAGCGCAATGGCAGCGCGGCCTAAAGTTGTAGGACTGGGGAACTGTGTTTTTCTACTGTCATAGCTGAGAAATCTTACACCCTTTGTGGGAATGTTCTACTATACGAGACTAACTTGTTTTAAGTTAAACTAATTGTTGTACTTGAGTTTGAGA</genome_strand>
        <mrna_strand>TCACCCGTGCTCTTATTCTGCGATTGAGGCAGCATGAAGAGACTGTAATGCAAGACG...........................................................................................................................................................................................................................................................................................GGACTGGATTAGCTGGAATGAGGCAGAAAGATCTTATACAGTGGTACGTGAGTCAGCAGAATGATAAGAATAGCTACAGCTCCATGGAAGAGGCAGCAGCCGAAGTCACGAAAGTGAAAGCTATTATAGAG..........................................................................................AGCTTGATTCGAAGAGAAGGCCATTTGATAGTTGTAGATGATGGTACGCAAGCAGGCGAGGAAAGTGGAAGGCAATCAGCATCCAGAAACGACCGGATTTTAGCAGTGGCTCCCAATTATGTTGTAGATTGATTTGGAATTCTTGTGAACAGGACAGAAAATCTGGGGCTGTTTGAGCGCAATGGCAGCGCGGCCTAAAGTTGTAGGACTGGGGAACTGTGTTTTTCTACTGTCATAGCTGAGAAATCTTACACCCTTTGTGGGAATGTTCTACTATACGAGACTAACTTGTTTTAAGTTAAACTAATTGTTGTACTTGAGTTTGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E204232" ref_strand="-" ref_description="SGN-E204232 [cLEC-13-J11]">
      <seq>cacccgtgctcttattctgcgattgaggcagcatgaagagactgtaatgcaagacgggactggattagctggaatgaggcagaaagatcttatacagtggtacgtgagtcagcagaatgataagaatagctacagctccatggaagaggcagcagccgaagtcacgaaagtgaaagctattatagagagcttgattcgaagagaaggccatttgatagttgtagatgatggtacgcaagcaggcgaggaaagtggaaggcaatcagcatccagaaacgaccggattttagcagtggctcccaattatgttgtagattgatttggaattcttgtgaacaggacagaaaatctggggctgtttgagcgcaatggcagcgcggcctaaagttgtaggactggggaactgtgtttttctactgtcatagctgagaaatcttacaccctttgtgggaatgttctactatacgagactaacttgttttaagttaaactaattgttgtacttgagtttgagaatgtgaagttatcaagcctacctgtactagtattagttttgagtttgcttatgttcaatgtagtatcaactggtattagtcttctggattcattaatggtacatttttaattaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="91860" stop="93462"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92160" g_stop="92215" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92216" i_stop="92498" i_length="283">
            <donor d_prob="0.312" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92499" g_stop="92629" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="187" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92630" i_stop="92719" i_length="90">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92720" g_stop="93162" g_length="443"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="630" r_length="443" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E204232" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>630</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E204232" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="92160" e_stop="92215"/>
          <exon e_start="92499" e_stop="92629"/>
          <exon e_start="92720" e_stop="93162"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACCCGTGCTCTTATTCTGCGATTGAGGCAGCATGAAGAGACTGTAATGCAAGACGGTAAGTCAGCGCGTACAAATTTTACAGATTCTTTTGCTTAGGGTTGTTAGCAAAAGTTGAATTGAAGTTCTACAATGCTTTGTTTCAATGACATTAAATTTTCTGTGTGATATGATATATGGAGAAATAATGAAATAGGGACACAACAAATAGGACCAGTAGGATCAAGTAATACAAGCTTGAAAAACATTCATTTGCTAGGGGAGAATTCAGTTTTAATCCAAGTGAAGACATTTTTCTGTTGTGGAATGTGGAACGCTCATAAACATTTATACACCTGTAGGGACTGGATTAGCTGGAATGAGGCAGAAAGATCTTATACAGTGGTACGTGAGTCAGCAGAATGATAAGAATAGCTACAGCTCCATGGAAGAGGCAGCAGCCGAAGTCACGAAAGTGAAAGCTATTATAGAGGTAACCTTGGATATTTATGCATTTTTAATGGTCTTGATAAATATATGCCCTATGCTCAACTGTTATTTGGACCATATTTATGTTGGACAGAGCTTGATTCGAAGAGAAGGCCATTTGATAGTTGTAGATGATGGTACGCAAGCAGGCGAGGAAAGTGGAAGGCAATCAGCATCCAGAAACGACCGGATTTTAGCAGTGGCTCCCAATTATGTTGTAGATTGATTTGGAATTCTTGTGAACAGGACAGAAAATCTGGGGCTGTTTGAGCGCAATGGCAGCGCGGCCTAAAGTTGTAGGACTGGGGAACTGTGTTTTTCTACTGTCATAGCTGAGAAATCTTACACCCTTTGTGGGAATGTTCTACTATACGAGACTAACTTGTTTTAAGTTAAACTAATTGTTGTACTTGAGTTTGAGAATGTGAAGTTATCAAGCCTACCTGTACTAGTATTAGTTTTGAGTTTGCTTATGTTCAATGTAGTATCAACTGGTATTAGTCTTCTGGATTCATTAATGGTACATTTTTAATTAGA</genome_strand>
        <mrna_strand>CACCCGTGCTCTTATTCTGCGATTGAGGCAGCATGAAGAGACTGTAATGCAAGACG...........................................................................................................................................................................................................................................................................................GGACTGGATTAGCTGGAATGAGGCAGAAAGATCTTATACAGTGGTACGTGAGTCAGCAGAATGATAAGAATAGCTACAGCTCCATGGAAGAGGCAGCAGCCGAAGTCACGAAAGTGAAAGCTATTATAGAG..........................................................................................AGCTTGATTCGAAGAGAAGGCCATTTGATAGTTGTAGATGATGGTACGCAAGCAGGCGAGGAAAGTGGAAGGCAATCAGCATCCAGAAACGACCGGATTTTAGCAGTGGCTCCCAATTATGTTGTAGATTGATTTGGAATTCTTGTGAACAGGACAGAAAATCTGGGGCTGTTTGAGCGCAATGGCAGCGCGGCCTAAAGTTGTAGGACTGGGGAACTGTGTTTTTCTACTGTCATAGCTGAGAAATCTTACACCCTTTGTGGGAATGTTCTACTATACGAGACTAACTTGTTTTAAGTTAAACTAATTGTTGTACTTGAGTTTGAGAATGTGAAGTTATCAAGCCTACCTGTACTAGTATTAGTTTTGAGTTTGCTTATGTTCAATGTAGTATCAACTGGTATTAGTCTTCTGGATTCATTAATGGTACATTTTTAATTAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E216328" ref_strand="+" ref_description="SGN-E216328 [cLEL-13-C4](-)">
      <seq>gattttagcagtggctcccaattatgttgtagattgatttggaattcttgtgaacaggacagaaaatctggggctgtttgagcgcaatggcagcgcggcctaaagttgtaggactggggaactgtgtttttctactgtcatagctgagaaatcttacaccctttgtgggaatgttctactatacgagactaacttgttttaagttaaactaattgttgtacttgagtttgagaatgtgaagttatcaagcctacctgtactagtattagttttgagtttgcttatgttcaatgtagtatcaactggtattagtcttctggattcattaatggtacatttttaattaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="92515" stop="93464"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92815" g_stop="93160" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="346" r_length="346" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="347" polyA_stop="362"/>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E216328" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>346</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E216328" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92815" e_stop="93160"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTTTAGCAGTGGCTCCCAATTATGTTGTAGATTGATTTGGAATTCTTGTGAACAGGACAGAAAATCTGGGGCTGTTTGAGCGCAATGGCAGCGCGGCCTAAAGTTGTAGGACTGGGGAACTGTGTTTTTCTACTGTCATAGCTGAGAAATCTTACACCCTTTGTGGGAATGTTCTACTATACGAGACTAACTTGTTTTAAGTTAAACTAATTGTTGTACTTGAGTTTGAGAATGTGAAGTTATCAAGCCTACCTGTACTAGTATTAGTTTTGAGTTTGCTTATGTTCAATGTAGTATCAACTGGTATTAGTCTTCTGGATTCATTAATGGTACATTTTTAATTA</genome_strand>
        <mrna_strand>GATTTTAGCAGTGGCTCCCAATTATGTTGTAGATTGATTTGGAATTCTTGTGAACAGGACAGAAAATCTGGGGCTGTTTGAGCGCAATGGCAGCGCGGCCTAAAGTTGTAGGACTGGGGAACTGTGTTTTTCTACTGTCATAGCTGAGAAATCTTACACCCTTTGTGGGAATGTTCTACTATACGAGACTAACTTGTTTTAAGTTAAACTAATTGTTGTACTTGAGTTTGAGAATGTGAAGTTATCAAGCCTACCTGTACTAGTATTAGTTTTGAGTTTGCTTATGTTCAATGTAGTATCAACTGGTATTAGTCTTCTGGATTCATTAATGGTACATTTTTAATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E307036" ref_strand="+" ref_description="SGN-E307036 [cLEY-15-I1]">
      <seq>aatacatatagccataaagccgacatcgctacatatgtcatacctggcaaagtttccggcatcatactatcctaccattcttacttctggctttgccattctcttttccttcatatctcagcaaagtttacacacagcttgctgttcggtgcggcgggtaatttcaaatccatctttagtagattgacgaggagaatcagagatgaagtatgtgttggttacaggaggagtggttagcgggctcggtaaaggagttaccgccagtagtatcggtcttatccttaagtgctgtggtcttcgcgttacttccattaagatagatccttacttgaacactgatgctggaacaatgtctccatttgagcatggagaagtattcgtcttggacgatggtggagaggtggacctagaccttggtaactatgaacgctctctggatattaagttgacacgtgacaacaatataactactggaaaaatttaccagtctgctcttgataaggagagaaaaggaaattatttggggaagactgttcatgtcgtccctcacattacagatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="93816" stop="96465"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94116" g_stop="94296" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="182" r_length="182" r_score="0.934"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94297" i_stop="94383" i_length="87">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.939" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94384" g_stop="94521" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="320" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="94522" i_stop="95316" i_length="795">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95317" g_stop="95396" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="400" r_length="80" r_score="0.988"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95397" i_stop="95814" i_length="418">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95815" g_stop="95901" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="487" r_length="87" r_score="0.989"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="95902" i_stop="96021" i_length="120">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="96022" g_stop="96072" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="488" r_stop="538" r_length="51" r_score="0.941"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="96073" i_stop="96142" i_length="70">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="96143" g_stop="96165" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="539" r_stop="561" r_length="23" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E307036" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>560</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E307036" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94116" e_stop="94296"/>
          <exon e_start="94384" e_stop="94521"/>
          <exon e_start="95317" e_stop="95396"/>
          <exon e_start="95815" e_stop="95901"/>
          <exon e_start="96022" e_stop="96072"/>
          <exon e_start="96143" e_stop="96165"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATACATATAGCCATAAAGCCGCCATCGCTTCATATTTCATACCTAACAAAGTTTCCGCCATCATTCTCTCCTACCATTCTTCCTTCTC-CTTTGCCATTCTCTTTTCCTTCATATCTCAGCAAAGTTTACACACAGCTTGCTGTTCGGTGCGGCGGGTAATTTCAAATCCATCTTTAGTAGGTAAAGCTAATTGCTATGTATATATTCTCTCTACATTCTAAGTTTCTGCAGCGAAAACAGTTGATATAGTGTTACTATTCATTGTAGATTGACGAGGAGAATCAGAGATGAAGTATGTGTTGGTTACAGGAGGAGTGGTTAGCGGGCTCGGTAAAGGAGTTACCGCCAGTAGTATCGGTCTTATCCTTAAGTGCTGTGGTCTTCGCGTTACTTCCATTAAGATAGGTTTGTTTCAGCTGATTTTATAATATATATATACCCTGTTTCTTGTAACAGACTAACAGAGTCATTTTACTCTGGTCTATGTGAATGGGAATTTTGGGCCAAGAGAATATTATTGTTATTTTTTGAAAAAAACTTTTCGGACGAAATCTTGAACTACTATTTGTGCAAAGGAGAAGCCAAGAAACTTAATAAGTTTTCCTTAACTAGGCAGCAATGCTTTTCTTTATCTTCTTTTTGTGGCATCGATGCTAAGTTGGTTAAATATCAAGCATTTTCTTGATCATAAACCATTTACTACCCCAAACTTAATTGTATTTTTGAACTTTTCGACGGAATCTTGAACTACTGTTTGTGCAAAGGAGAAGCCAAGAAAGTTGATAATTTTTTTTGTGTTAGGGAGCATGGCTTTTCTTTATGTTCTTCGTGTAGTATGCATGCTAAGTTGGTAAAGTTTCAAGAATTTTTTTGATCAGAAACCATTTACCATCCCAACCCTAATTGTATTTTTAAATTTTTCTAACGGAACCTTAAACTACTCTTTGTACAAAGAAGAAGCCAAGAAAGTTGATAAGTTTTCCTTGTTAGGGAGCATTGCTTTTCGTTAGGTTCCTTATGTGGCATCGATGCTAAGTTGGTAAAGTTTCAAGCATTTTCTTTATCAGAAACCATTTACTAACCAACCCTAATTGTATTTGTTCTGACAAGCTGTTTTTGGTTTGTTTGTTCTTAACAAGTTATATTAATTGTCATGGTATGTATCTATTCTGCTTTTTCATCGGATTTCCCTTGTTTCAGATCCTTACTTGAACACTGATGCTGGAACAATGTCTCCATTTGAGCATGGAGAAGTATTTGTCTTGGACGATGGTGGAGAGGTTAGTCAGTAATCTTTCACATTATCAATTCATTAGTGCTTTTCTGTGCTGAAATAGATTTTGTTTCATCTTCTCTCTAGACATCTGTAGAGGTGAGGTGGAGTGGTCAGAGCTGGAACAAGTTCTTTAAACTTTGAACTTATAAATGTGATATCTTGCAGTATAGTCTTTCTAGCTTGACCTTAACATGTTACTTAATTTTCTGATCGCGGCTCTCTTCCCTGATAGTGTTACTCATAGCTCTTGTTTTTCATTTAGGGGAAAAACTTCCGATTGCTCTGTTTTATTGTTATTGTGTCAACTTTTATATAGAGAGAGTAGAGACAAACATTATTGTTTTTAGACTCAGGAAAGATGAAGTGGAATTTATTTGTGTCGATGCCTATAGATAATTGCTTTATTTTCTTTGGTTTTGTAGGTGGACCTAGACCTTGGTAACTATGAACGCTTTCTGGATATTAAGTTGACACGTGACAACAATATAACTACTGGAAAAATTTACCAGGTATGTTGTCAATAATCGGAAATTTCTTCCTACAAGATTTTATGGATTCATGCTTCGTCAAATTCATGTAATGAAAGCAAAATGTTTAGCTTGAGAAACTGTTTGAATTTTCATTTTCAGTCTGTTCTTGATAAGGAGAGAAAAGGAGATTATTTGGGGAAGACTGTTCAGGTTTGTCGCTCTTCCAGAGTACATTTTCATTTATTAAGTTATACTGTTACTAATCTGCCCACTTGTTTAGGTCGTCCCTCACATTACAGATGC</genome_strand>
        <mrna_strand>AATACATATAGCCATAAAGCCGACATCGCTACATATGTCATACCTGGCAAAGTTTCCGGCATCATACTATCCTACCATTCTTACTTCTGGCTTTGCCATTCTCTTTTCCTTCATATCTCAGCAAAGTTTACACACAGCTTGCTGTTCGGTGCGGCGGGTAATTTCAAATCCATCTTTAGTAG.......................................................................................ATTGACGAGGAGAATCAGAGATGAAGTATGTGTTGGTTACAGGAGGAGTGGTTAGCGGGCTCGGTAAAGGAGTTACCGCCAGTAGTATCGGTCTTATCCTTAAGTGCTGTGGTCTTCGCGTTACTTCCATTAAGATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTTACTTGAACACTGATGCTGGAACAATGTCTCCATTTGAGCATGGAGAAGTATTCGTCTTGGACGATGGTGGAGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGACCTAGACCTTGGTAACTATGAACGCTCTCTGGATATTAAGTTGACACGTGACAACAATATAACTACTGGAAAAATTTACCAG........................................................................................................................TCTGCTCTTGATAAGGAGAGAAAAGGAAATTATTTGGGGAAGACTGTTCAT......................................................................GTCGTCCCTCACATTACAGATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E205964" ref_strand="+" ref_description="SGN-E205964 [cLEC-20-C8]">
      <seq>cataaagccgccatcgcttcatatttcatacctaacaaagtttccgggatcattctctcctaccattcttccttctcctttgccattctcttttccttcatatctcagcaaagtttacacacagcttgctgttcggtgcggcgggtaatttcaaatccatctttagtagattgacgaggagaatcagagatgaagtatgtgttggttacaggaggagtggttagcgggctcggtaaaggagttaccgccagtagtatcggtcttatccttaagtgctgtggtcttcgcgttacttccattaagatagatccttacttgaacactgatgctggaacaatgtctccatttgagcatggagaagtatttgtcttggacgatggtggagaggtggacctagaccttggtaactatgaacgctttctggatattaagttgacacgtgacaacaatataactactggaaaaatttaccagtctgttcttgataaggagagaaaaggagattatttggggaagactgttcaggtcgtccctcacattacagatgccattcaagagtggattgaacgtgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="93828" stop="96489"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94128" g_stop="94296" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="169" r_length="169" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94297" i_stop="94383" i_length="87">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.939" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94384" g_stop="94521" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="307" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="94522" i_stop="95316" i_length="795">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95317" g_stop="95396" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="387" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95397" i_stop="95814" i_length="418">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95815" g_stop="95901" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="474" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="95902" i_stop="96021" i_length="120">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="96022" g_stop="96072" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="475" r_stop="525" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="96073" i_stop="96142" i_length="70">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="96143" g_stop="96189" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="526" r_stop="572" r_length="47" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E205964" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>572</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E205964" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94128" e_stop="94296"/>
          <exon e_start="94384" e_stop="94521"/>
          <exon e_start="95317" e_stop="95396"/>
          <exon e_start="95815" e_stop="95901"/>
          <exon e_start="96022" e_stop="96072"/>
          <exon e_start="96143" e_stop="96189"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATAAAGCCGCCATCGCTTCATATTTCATACCTAACAAAGTTTCCGCCATCATTCTCTCCTACCATTCTTCCTTCTCCTTTGCCATTCTCTTTTCCTTCATATCTCAGCAAAGTTTACACACAGCTTGCTGTTCGGTGCGGCGGGTAATTTCAAATCCATCTTTAGTAGGTAAAGCTAATTGCTATGTATATATTCTCTCTACATTCTAAGTTTCTGCAGCGAAAACAGTTGATATAGTGTTACTATTCATTGTAGATTGACGAGGAGAATCAGAGATGAAGTATGTGTTGGTTACAGGAGGAGTGGTTAGCGGGCTCGGTAAAGGAGTTACCGCCAGTAGTATCGGTCTTATCCTTAAGTGCTGTGGTCTTCGCGTTACTTCCATTAAGATAGGTTTGTTTCAGCTGATTTTATAATATATATATACCCTGTTTCTTGTAACAGACTAACAGAGTCATTTTACTCTGGTCTATGTGAATGGGAATTTTGGGCCAAGAGAATATTATTGTTATTTTTTGAAAAAAACTTTTCGGACGAAATCTTGAACTACTATTTGTGCAAAGGAGAAGCCAAGAAACTTAATAAGTTTTCCTTAACTAGGCAGCAATGCTTTTCTTTATCTTCTTTTTGTGGCATCGATGCTAAGTTGGTTAAATATCAAGCATTTTCTTGATCATAAACCATTTACTACCCCAAACTTAATTGTATTTTTGAACTTTTCGACGGAATCTTGAACTACTGTTTGTGCAAAGGAGAAGCCAAGAAAGTTGATAATTTTTTTTGTGTTAGGGAGCATGGCTTTTCTTTATGTTCTTCGTGTAGTATGCATGCTAAGTTGGTAAAGTTTCAAGAATTTTTTTGATCAGAAACCATTTACCATCCCAACCCTAATTGTATTTTTAAATTTTTCTAACGGAACCTTAAACTACTCTTTGTACAAAGAAGAAGCCAAGAAAGTTGATAAGTTTTCCTTGTTAGGGAGCATTGCTTTTCGTTAGGTTCCTTATGTGGCATCGATGCTAAGTTGGTAAAGTTTCAAGCATTTTCTTTATCAGAAACCATTTACTAACCAACCCTAATTGTATTTGTTCTGACAAGCTGTTTTTGGTTTGTTTGTTCTTAACAAGTTATATTAATTGTCATGGTATGTATCTATTCTGCTTTTTCATCGGATTTCCCTTGTTTCAGATCCTTACTTGAACACTGATGCTGGAACAATGTCTCCATTTGAGCATGGAGAAGTATTTGTCTTGGACGATGGTGGAGAGGTTAGTCAGTAATCTTTCACATTATCAATTCATTAGTGCTTTTCTGTGCTGAAATAGATTTTGTTTCATCTTCTCTCTAGACATCTGTAGAGGTGAGGTGGAGTGGTCAGAGCTGGAACAAGTTCTTTAAACTTTGAACTTATAAATGTGATATCTTGCAGTATAGTCTTTCTAGCTTGACCTTAACATGTTACTTAATTTTCTGATCGCGGCTCTCTTCCCTGATAGTGTTACTCATAGCTCTTGTTTTTCATTTAGGGGAAAAACTTCCGATTGCTCTGTTTTATTGTTATTGTGTCAACTTTTATATAGAGAGAGTAGAGACAAACATTATTGTTTTTAGACTCAGGAAAGATGAAGTGGAATTTATTTGTGTCGATGCCTATAGATAATTGCTTTATTTTCTTTGGTTTTGTAGGTGGACCTAGACCTTGGTAACTATGAACGCTTTCTGGATATTAAGTTGACACGTGACAACAATATAACTACTGGAAAAATTTACCAGGTATGTTGTCAATAATCGGAAATTTCTTCCTACAAGATTTTATGGATTCATGCTTCGTCAAATTCATGTAATGAAAGCAAAATGTTTAGCTTGAGAAACTGTTTGAATTTTCATTTTCAGTCTGTTCTTGATAAGGAGAGAAAAGGAGATTATTTGGGGAAGACTGTTCAGGTTTGTCGCTCTTCCAGAGTACATTTTCATTTATTAAGTTATACTGTTACTAATCTGCCCACTTGTTTAGGTCGTCCCTCACATTACAGATGCCATTCAAGAGTGGATTGAACGTGT</genome_strand>
        <mrna_strand>CATAAAGCCGCCATCGCTTCATATTTCATACCTAACAAAGTTTCCGGGATCATTCTCTCCTACCATTCTTCCTTCTCCTTTGCCATTCTCTTTTCCTTCATATCTCAGCAAAGTTTACACACAGCTTGCTGTTCGGTGCGGCGGGTAATTTCAAATCCATCTTTAGTAG.......................................................................................ATTGACGAGGAGAATCAGAGATGAAGTATGTGTTGGTTACAGGAGGAGTGGTTAGCGGGCTCGGTAAAGGAGTTACCGCCAGTAGTATCGGTCTTATCCTTAAGTGCTGTGGTCTTCGCGTTACTTCCATTAAGATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTTACTTGAACACTGATGCTGGAACAATGTCTCCATTTGAGCATGGAGAAGTATTTGTCTTGGACGATGGTGGAGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGACCTAGACCTTGGTAACTATGAACGCTTTCTGGATATTAAGTTGACACGTGACAACAATATAACTACTGGAAAAATTTACCAG........................................................................................................................TCTGTTCTTGATAAGGAGAGAAAAGGAGATTATTTGGGGAAGACTGTTCAG......................................................................GTCGTCCCTCACATTACAGATGCCATTCAAGAGTGGATTGAACGTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E209607" ref_strand="+" ref_description="SGN-E209607 [cLEC-54-C18]">
      <seq>cataaagccgccatcgcttcatatttcatacctaacaaagtttccgccatcattctctcctaccattcttccttctcctttgccattctcttttccttcatatctcagcaaagtttacacacagcttgctgttcggtgcggcgggtaatttcaaatccatctttagtagattgacgaggagaatcagagatgaagtatgtgttggttacaggaggagaggttagcgggctcggtaaaggagttaccgccagtagtatcggtcttatccttaagtgctgtggtcttcgcgttacttccattaagatagatccttacttgaacactgatgctggaacaatgtctccatttgagcatggagaagtatttgtcttggacgatggtggagagggggacctagaccttggtaactatgaacgctttctggatatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="93828" stop="96156"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94128" g_stop="94296" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="169" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94297" i_stop="94383" i_length="87">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.939" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94384" g_stop="94521" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="307" r_length="138" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="94522" i_stop="95316" i_length="795">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95317" g_stop="95396" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="387" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95397" i_stop="95814" i_length="418">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95815" g_stop="95856" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="429" r_length="42" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E209607" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E209607" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94128" e_stop="94296"/>
          <exon e_start="94384" e_stop="94521"/>
          <exon e_start="95317" e_stop="95396"/>
          <exon e_start="95815" e_stop="95856"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATAAAGCCGCCATCGCTTCATATTTCATACCTAACAAAGTTTCCGCCATCATTCTCTCCTACCATTCTTCCTTCTCCTTTGCCATTCTCTTTTCCTTCATATCTCAGCAAAGTTTACACACAGCTTGCTGTTCGGTGCGGCGGGTAATTTCAAATCCATCTTTAGTAGGTAAAGCTAATTGCTATGTATATATTCTCTCTACATTCTAAGTTTCTGCAGCGAAAACAGTTGATATAGTGTTACTATTCATTGTAGATTGACGAGGAGAATCAGAGATGAAGTATGTGTTGGTTACAGGAGGAGTGGTTAGCGGGCTCGGTAAAGGAGTTACCGCCAGTAGTATCGGTCTTATCCTTAAGTGCTGTGGTCTTCGCGTTACTTCCATTAAGATAGGTTTGTTTCAGCTGATTTTATAATATATATATACCCTGTTTCTTGTAACAGACTAACAGAGTCATTTTACTCTGGTCTATGTGAATGGGAATTTTGGGCCAAGAGAATATTATTGTTATTTTTTGAAAAAAACTTTTCGGACGAAATCTTGAACTACTATTTGTGCAAAGGAGAAGCCAAGAAACTTAATAAGTTTTCCTTAACTAGGCAGCAATGCTTTTCTTTATCTTCTTTTTGTGGCATCGATGCTAAGTTGGTTAAATATCAAGCATTTTCTTGATCATAAACCATTTACTACCCCAAACTTAATTGTATTTTTGAACTTTTCGACGGAATCTTGAACTACTGTTTGTGCAAAGGAGAAGCCAAGAAAGTTGATAATTTTTTTTGTGTTAGGGAGCATGGCTTTTCTTTATGTTCTTCGTGTAGTATGCATGCTAAGTTGGTAAAGTTTCAAGAATTTTTTTGATCAGAAACCATTTACCATCCCAACCCTAATTGTATTTTTAAATTTTTCTAACGGAACCTTAAACTACTCTTTGTACAAAGAAGAAGCCAAGAAAGTTGATAAGTTTTCCTTGTTAGGGAGCATTGCTTTTCGTTAGGTTCCTTATGTGGCATCGATGCTAAGTTGGTAAAGTTTCAAGCATTTTCTTTATCAGAAACCATTTACTAACCAACCCTAATTGTATTTGTTCTGACAAGCTGTTTTTGGTTTGTTTGTTCTTAACAAGTTATATTAATTGTCATGGTATGTATCTATTCTGCTTTTTCATCGGATTTCCCTTGTTTCAGATCCTTACTTGAACACTGATGCTGGAACAATGTCTCCATTTGAGCATGGAGAAGTATTTGTCTTGGACGATGGTGGAGAGGTTAGTCAGTAATCTTTCACATTATCAATTCATTAGTGCTTTTCTGTGCTGAAATAGATTTTGTTTCATCTTCTCTCTAGACATCTGTAGAGGTGAGGTGGAGTGGTCAGAGCTGGAACAAGTTCTTTAAACTTTGAACTTATAAATGTGATATCTTGCAGTATAGTCTTTCTAGCTTGACCTTAACATGTTACTTAATTTTCTGATCGCGGCTCTCTTCCCTGATAGTGTTACTCATAGCTCTTGTTTTTCATTTAGGGGAAAAACTTCCGATTGCTCTGTTTTATTGTTATTGTGTCAACTTTTATATAGAGAGAGTAGAGACAAACATTATTGTTTTTAGACTCAGGAAAGATGAAGTGGAATTTATTTGTGTCGATGCCTATAGATAATTGCTTTATTTTCTTTGGTTTTGTAGGTGGACCTAGACCTTGGTAACTATGAACGCTTTCTGGATATT</genome_strand>
        <mrna_strand>CATAAAGCCGCCATCGCTTCATATTTCATACCTAACAAAGTTTCCGCCATCATTCTCTCCTACCATTCTTCCTTCTCCTTTGCCATTCTCTTTTCCTTCATATCTCAGCAAAGTTTACACACAGCTTGCTGTTCGGTGCGGCGGGTAATTTCAAATCCATCTTTAGTAG.......................................................................................ATTGACGAGGAGAATCAGAGATGAAGTATGTGTTGGTTACAGGAGGAGAGGTTAGCGGGCTCGGTAAAGGAGTTACCGCCAGTAGTATCGGTCTTATCCTTAAGTGCTGTGGTCTTCGCGTTACTTCCATTAAGATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTTACTTGAACACTGATGCTGGAACAATGTCTCCATTTGAGCATGGAGAAGTATTTGTCTTGGACGATGGTGGAGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGACCTAGACCTTGGTAACTATGAACGCTTTCTGGATATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E745093" ref_strand="+" ref_description="SGN-E745093 [GI|47106035]">
      <seq>gatatttcatacctaacaaagtttccgccatcattctctcctaccattcttccttctcctttgccattctcttttccttcatatctcagcaaagtttacacacagcttgctgttcggtgcggcgggtaatttcaaatccatctttagtagattgacgaggagaatcagagatgaagtatgtgttggttacaggaggagtggttagcgggctcggtaaaggagttaccgccagtagtatcggtcttatccttaagtgctgtggtcttcgcgttacttccattaagatagatccttacttgaacactgatgctggaacaatgtctccatttgagcatggagaagtatttgtcttggacgatggtggagaggtggacctagaccttggtaactatgaacgctttctggatattaagttgacacgtgacaacaatataactactggaaaaatttaccagtctgttcttgataaggagagaaaaggagattatttggggaagactgttcaggtcgtccctcacattacagatgccattcaagagtggattgaacgtgtggctgtcataccagttgatggagaggatagtccagctgatgtttgtgttatagaactgggtggaactataggagatattgagtctatgccatttattgaagctttaggacaattctcatatcgtgtaggtgctggaaatttttgcttgatacatgtcagccttgtgcccgttttgaatgtagttggtgagcagaaaacaaagccaactcaacacagcgtcaggggtttgagaagcctgggactgactccaaatattttagcctgccggagcacaacggcacttgatgataacgtgaaggagaaactttcccgtttttgccatgttccggttgatagcatcatcagtctttatgatgcttcaaacatttggcgagttcctttgattttaagagaccagaaggcccatgaagcaattctgaaagtgctgaatcttaaaggagttgctcgggaacctgtctttggagaatggacatctcggactgaactttgtgacagactacatgagccagttagagttgccatggtgggaaagtacactggactttcagattcgtatctctcagtactgaaggctcttttgcattcctctgtagcttgccgcaggaaactctttgtcgattgggttccagccagtgaccttgaaaatgaaactgccaaagagaatcctgaaaattatagaaattcgtggaatttgctgaagggggcggatgctgtactagttcccggaggatttggtgatagaggtgtggagggtaaaatacttgctgccaaatacgcacgtgaaaacaggattccttacctgggcatatgtttaggcatgcaaattgctgttattgagtatgctagatctattcttgggttgcaagatgcgaacagtacagagtttgatcccaacactccgaatccttgtgtaattttcatgccggagggttcaaaaacgcatatggggggtacaatgcgtcttggatcaagaagaacttattttcaagtcagagattctaaatctacaaaattatttggcaaccagagctttgtagatgagaggcaccgtcatagatatgaggtgaatcctgatatggtgcagcaatttgaagatgctggcctttctttcactggcaaagatgaaactggtcgtcgcatggagattgttgagctgcctaatcatccgtactttattggcgttcaatttcatcctgaatttaaatcaaggccaggaaaaccgtctgccgtgttcttagggcttatagcagcagcatgcgggcagcttgattgtctcctgaagaagggtggaacaccgactcatggacttagcaatggtacagcatctggcgaaaaattgcatcgaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="93848" stop="99944"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94147" g_stop="94296" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="150" r_length="150" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94297" i_stop="94383" i_length="87">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.939" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94384" g_stop="94521" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="288" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="94522" i_stop="95316" i_length="795">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95317" g_stop="95396" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="368" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95397" i_stop="95814" i_length="418">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95815" g_stop="95901" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="369" r_stop="455" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="95902" i_stop="96021" i_length="120">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="96022" g_stop="96072" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="506" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="96073" i_stop="96142" i_length="70">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="96143" g_stop="96260" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="507" r_stop="624" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="96261" i_stop="96341" i_length="81">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="96342" g_stop="96398" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="625" r_stop="681" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="96399" i_stop="96523" i_length="125">
            <donor d_prob="0.765" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="96524" g_stop="96588" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="682" r_stop="746" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="96589" i_stop="96674" i_length="86">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="96675" g_stop="96758" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="747" r_stop="830" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="96759" i_stop="96931" i_length="173">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="96932" g_stop="96982" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="831" r_stop="881" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="96983" i_stop="97095" i_length="113">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="97096" g_stop="97158" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="882" r_stop="944" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="97159" i_stop="97248" i_length="90">
            <donor d_prob="0.317" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="97249" g_stop="97295" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="945" r_stop="991" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="97296" i_stop="97441" i_length="146">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="97442" g_stop="97511" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="992" r_stop="1061" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="97512" i_stop="97582" i_length="71">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="97583" g_stop="97645" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1062" r_stop="1124" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="97646" i_stop="97922" i_length="277">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="97923" g_stop="98012" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1125" r_stop="1214" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="98013" i_stop="98083" i_length="71">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="98084" g_stop="98122" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1215" r_stop="1253" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="16">
          <gDNA_intron_boundary i_start="98123" i_stop="98232" i_length="110">
            <donor d_prob="0.043" d_score="0.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="17">
          <gDNA_exon_boundary g_start="98233" g_stop="98460" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="1254" r_stop="1481" r_length="228" r_score="1.000"/>
        </exon>
        <intron i_serial="17">
          <gDNA_intron_boundary i_start="98461" i_stop="98567" i_length="107">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="18">
          <gDNA_exon_boundary g_start="98568" g_stop="98653" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1482" r_stop="1567" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="18">
          <gDNA_intron_boundary i_start="98654" i_stop="98765" i_length="112">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.921" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="19">
          <gDNA_exon_boundary g_start="98766" g_stop="98814" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1568" r_stop="1616" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="19">
          <gDNA_intron_boundary i_start="98815" i_stop="98959" i_length="145">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="20">
          <gDNA_exon_boundary g_start="98960" g_stop="99040" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1617" r_stop="1697" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="20">
          <gDNA_intron_boundary i_start="99041" i_stop="99121" i_length="81">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="21">
          <gDNA_exon_boundary g_start="99122" g_stop="99215" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1698" r_stop="1791" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="21">
          <gDNA_intron_boundary i_start="99216" i_stop="99535" i_length="320">
            <donor d_prob="0.759" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="22">
          <gDNA_exon_boundary g_start="99536" g_stop="99656" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1792" r_stop="1912" r_length="121" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E745093" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1912</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E745093" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94147" e_stop="94296"/>
          <exon e_start="94384" e_stop="94521"/>
          <exon e_start="95317" e_stop="95396"/>
          <exon e_start="95815" e_stop="95901"/>
          <exon e_start="96022" e_stop="96072"/>
          <exon e_start="96143" e_stop="96260"/>
          <exon e_start="96342" e_stop="96398"/>
          <exon e_start="96524" e_stop="96588"/>
          <exon e_start="96675" e_stop="96758"/>
          <exon e_start="96932" e_stop="96982"/>
          <exon e_start="97096" e_stop="97158"/>
          <exon e_start="97249" e_stop="97295"/>
          <exon e_start="97442" e_stop="97511"/>
          <exon e_start="97583" e_stop="97645"/>
          <exon e_start="97923" e_stop="98012"/>
          <exon e_start="98084" e_stop="98122"/>
          <exon e_start="98233" e_stop="98460"/>
          <exon e_start="98568" e_stop="98653"/>
          <exon e_start="98766" e_stop="98814"/>
          <exon e_start="98960" e_stop="99040"/>
          <exon e_start="99122" e_stop="99215"/>
          <exon e_start="99536" e_stop="99656"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATATTTCATACCTAACAAAGTTTCCGCCATCATTCTCTCCTACCATTCTTCCTTCTCCTTTGCCATTCTCTTTTCCTTCATATCTCAGCAAAGTTTACACACAGCTTGCTGTTCGGTGCGGCGGGTAATTTCAAATCCATCTTTAGTAGGTAAAGCTAATTGCTATGTATATATTCTCTCTACATTCTAAGTTTCTGCAGCGAAAACAGTTGATATAGTGTTACTATTCATTGTAGATTGACGAGGAGAATCAGAGATGAAGTATGTGTTGGTTACAGGAGGAGTGGTTAGCGGGCTCGGTAAAGGAGTTACCGCCAGTAGTATCGGTCTTATCCTTAAGTGCTGTGGTCTTCGCGTTACTTCCATTAAGATAGGTTTGTTTCAGCTGATTTTATAATATATATATACCCTGTTTCTTGTAACAGACTAACAGAGTCATTTTACTCTGGTCTATGTGAATGGGAATTTTGGGCCAAGAGAATATTATTGTTATTTTTTGAAAAAAACTTTTCGGACGAAATCTTGAACTACTATTTGTGCAAAGGAGAAGCCAAGAAACTTAATAAGTTTTCCTTAACTAGGCAGCAATGCTTTTCTTTATCTTCTTTTTGTGGCATCGATGCTAAGTTGGTTAAATATCAAGCATTTTCTTGATCATAAACCATTTACTACCCCAAACTTAATTGTATTTTTGAACTTTTCGACGGAATCTTGAACTACTGTTTGTGCAAAGGAGAAGCCAAGAAAGTTGATAATTTTTTTTGTGTTAGGGAGCATGGCTTTTCTTTATGTTCTTCGTGTAGTATGCATGCTAAGTTGGTAAAGTTTCAAGAATTTTTTTGATCAGAAACCATTTACCATCCCAACCCTAATTGTATTTTTAAATTTTTCTAACGGAACCTTAAACTACTCTTTGTACAAAGAAGAAGCCAAGAAAGTTGATAAGTTTTCCTTGTTAGGGAGCATTGCTTTTCGTTAGGTTCCTTATGTGGCATCGATGCTAAGTTGGTAAAGTTTCAAGCATTTTCTTTATCAGAAACCATTTACTAACCAACCCTAATTGTATTTGTTCTGACAAGCTGTTTTTGGTTTGTTTGTTCTTAACAAGTTATATTAATTGTCATGGTATGTATCTATTCTGCTTTTTCATCGGATTTCCCTTGTTTCAGATCCTTACTTGAACACTGATGCTGGAACAATGTCTCCATTTGAGCATGGAGAAGTATTTGTCTTGGACGATGGTGGAGAGGTTAGTCAGTAATCTTTCACATTATCAATTCATTAGTGCTTTTCTGTGCTGAAATAGATTTTGTTTCATCTTCTCTCTAGACATCTGTAGAGGTGAGGTGGAGTGGTCAGAGCTGGAACAAGTTCTTTAAACTTTGAACTTATAAATGTGATATCTTGCAGTATAGTCTTTCTAGCTTGACCTTAACATGTTACTTAATTTTCTGATCGCGGCTCTCTTCCCTGATAGTGTTACTCATAGCTCTTGTTTTTCATTTAGGGGAAAAACTTCCGATTGCTCTGTTTTATTGTTATTGTGTCAACTTTTATATAGAGAGAGTAGAGACAAACATTATTGTTTTTAGACTCAGGAAAGATGAAGTGGAATTTATTTGTGTCGATGCCTATAGATAATTGCTTTATTTTCTTTGGTTTTGTAGGTGGACCTAGACCTTGGTAACTATGAACGCTTTCTGGATATTAAGTTGACACGTGACAACAATATAACTACTGGAAAAATTTACCAGGTATGTTGTCAATAATCGGAAATTTCTTCCTACAAGATTTTATGGATTCATGCTTCGTCAAATTCATGTAATGAAAGCAAAATGTTTAGCTTGAGAAACTGTTTGAATTTTCATTTTCAGTCTGTTCTTGATAAGGAGAGAAAAGGAGATTATTTGGGGAAGACTGTTCAGGTTTGTCGCTCTTCCAGAGTACATTTTCATTTATTAAGTTATACTGTTACTAATCTGCCCACTTGTTTAGGTCGTCCCTCACATTACAGATGCCATTCAAGAGTGGATTGAACGTGTGGCTGTCATACCAGTTGATGGAGAGGATAGTCCAGCTGATGTTTGTGTTATAGAACTGGGTGGAACTATAGGTATGGTCAAATGATGTTTGACAGTAGGCATGATAAGTTGTTTATGGATCTGTTTTCTCAAAGTAACTGATCCTTGTGCAGGAGATATTGAGTCTATGCCATTTATTGAAGCTTTAGGACAATTCTCATATCGTGTAGGTAAGGTTGCAAGTCCAAGTTTGAACTATGACATCACCATATAATGTATTTTGTGCCCCAGGAAATGCAACTGTTAATTTTAGTGCTTGAATGCAATAAAAAAATTTCAATTTGTTGCTTCTTAGGTGCTGGAAATTTTTGCTTGATACATGTCAGCCTTGTGCCCGTTTTGAATGTAGTTGGTGAGCAGGTAGCTTCTGATCAAAGTGTATTTACATGAATCTTCCCTTTAAAGTAACTAGTTAGTTGAGTGCCTAAGCTTTTTTTAATATTCAGAAAACAAAGCCAACTCAACACAGCGTCAGGGGTTTGAGAAGCCTGGGACTGACTCCAAATATTTTAGCCTGCCGGAGCACAACGGTCTCTCTCTCTCTCGCTTTCGCTCTCTACATATATATATTTATATATTACTCTCTAAGTGTGTCTTTTCATCAGCTTTCTCTCTCGCTATCTACATATATACCATTTGTCTTTCTTTTGTCAGATGTTTAGGTTTGTCAAGTTCAGCTTTTGAAGTTTGTTTTCTTATTTAGGCACTTGATGATAACGTGAAGGAGAAACTTTCCCGTTTTTGCCATGTTCCGGTATTGTTTTCTTTCTCTATACAATCTATATCTCCGAACACCTATATCTTTTATCTGGCCATCTATTATATGTGATTCCCTGTTGCTGAAGTTCTGTGTATCTTGGTTTCCAGGTTGATAGCATCATCAGTCTTTATGATGCTTCAAACATTTGGCGAGTTCCTTTGATTTTAAGAGTGAGTAGTGTTGGTACTCTTATTTTGATGTTTTTGCATAAATTTTCAGAGTGAGTTTTAAGAAAAAAAGTATTTTCTTCGTTGGACCAGGACCAGAAGGCCCATGAAGCAATTCTGAAAGTGCTGAATCTTAAAGGGTAATGCCTGATGAGCTCCACTTCAAATGTCTTTCGTTTCTGTTATGTACATTAATGACATATAGTCTTCAATCTTCAGCTTTTAGTATCTTCACTTTTGTGACATTTCGTGTATGGTAATATATTTTGGTTTTTGTCATTTGTAGAGTTGCTCGGGAACCTGTCTTTGGAGAATGGACATCTCGGACTGAACTTTGTGACAGACTACATGAGCCAGTATGTCACAGGATATATATGCTAATTCTCTTTCCCTTTAGGAGTTTATCTCATATTTGCCATCCATACAGGTTAGAGTTGCCATGGTGGGAAAGTACACTGGACTTTCAGATTCGTATCTCTCAGTACTGAAGGTGAATATCTCATGTAGACTTCTCTTAAGTCAAATCTAGATCAACTGACACTTTTTACTTGCTCTTATCTACTCATGTGATTTTTGTTGTGTTTATGTGGTTAGCCCCTCAAACACTTTCCAGTATAGAATAAACAAACACTTTCCTCTGCTCTAATGCGCTTCTCGTTTTGATCTCATTACTTTTAGGCAATTGCTGTAGTCTGTCTTTTTTAAATTCATATAGTTTCTCCCTAGAGTTAATAACCATCTGTTTGATTTATTGTTTGTCCTTTCAGGCTCTTTTGCATTCCTCTGTAGCTTGCCGCAGGAAACTCTTTGTCGATTGGGTTCCAGCCAGTGACCTTGAAAATGAAACTGCCAAAGAGGTATTTTTTTGTCTGTCTTTGTGTTGCTTTATATCTTGTATGACAAGCTGACTTTTAACTTCCAATTGCAGAATCCTGAAAATTATAGAAATTCGTGGAATTTGCTGAAGGTTCGGATAGTCTGATTCCTCAACGTTATATGATAGCTGAGCTTACTTTAGTACCCCTACTTAGTCTTATATACTCTTGTGACGTCTGACGGAGAGTCATCTGTTAATAGGGGGCGGATGCTGTACTAGTTCCCGGAGGATTTGGTGATAGAGGTGTGGAGGGTAAAATACTTGCTGCCAAATACGCACGTGAAAACAGGATTCCTTACCTGGGCATATGTTTAGGCATGCAAATTGCTGTTATTGAGTATGCTAGATCTATTCTTGGGTTGCAAGATGCGAACAGTACAGAGTTTGATCCCAACACTCCGAATCCTTGTGTAATTTTCATGCCGGAGGTTAAGTTCTGACACTTCCCGTTAATCATGAATTTTTCTCATGACTTTTATGTATTTTAGGTCTCATTTTAGTACTGTCTATATTAATCTGTAGACCATATTCACAGGGTTCAAAAACGCATATGGGGGGTACAATGCGTCTTGGATCAAGAAGAACTTATTTTCAAGTCAGAGATTCTAAATCTACAAAATTGTAAGTACTTCCTTTCCTCCAACCGCACTGCATTGGCTATATTTTGATTTGAAGCCATTCTTGGAGGGCTTCTATTGATATTACCAAGTGGCTAAACTATATCTTTTCTCAGATTTGGCAACCAGAGCTTTGTAGATGAGAGGCACCGTCATAGATATGAGGTACACCACTTTTTTTTCTTCTGTAAATTGGAACAGTGGTGTAACTATTGCACAGCTAGGTGGACTGGTTTAACTATATGTGGACTATAAGATGTGATATCTTTAGCAAGGGACGTATGCTCAAAACTTATTTTGTGCTGTGTAGGTGAATCCTGATATGGTGCAGCAATTTGAAGATGCTGGCCTTTCTTTCACTGGCAAAGATGAAACTGGTCGTCGCATGGAGGTGAACCTTTGTCTGATTGTATTACGAATTCATGCTAGATACTCGTAGTATTATTGATTTAATTTTCTATTTCTTGTACAGATTGTTGAGCTGCCTAATCATCCGTACTTTATTGGCGTTCAATTTCATCCTGAATTTAAATCAAGGCCAGGAAAACCGTCTGCCGTGTTCTTAGGTATTCCTCCCTGCTTTATCCTTCCGCTCATAGCCAGCTAGAATACCTGATGCTTACTTTGGAACTTTGGAAGTATCATTTCAACATTTGTATTTGCATTTCAATATGTGGCTCGCTTCTAGTTGATCCAGAAAAGTCAATGTATACAATCTTAGATTATTTGATTTGTAGACATAAAACTAACGATTGGTACTTTGAAGGAATTAAGTGAATGAAGGTCTTTTTAACCGTGACGTCCAGCTCCTAATGGTTATGAGTAGTCTCTTGTTTTGAATGTAATGCTCTTCGTTATGATGTGTTATTCCTATTTCTCTGAACAGGGCTTATAGCAGCAGCATGCGGGCAGCTTGATTGTCTCCTGAAGAAGGGTGGAACACCGACTCATGGACTTAGCAATGGTACAGCATCTGGCGAAAAATTGCATCGAAATGGAAATGGAAC</genome_strand>
        <mrna_strand>GATATTTCATACCTAACAAAGTTTCCGCCATCATTCTCTCCTACCATTCTTCCTTCTCCTTTGCCATTCTCTTTTCCTTCATATCTCAGCAAAGTTTACACACAGCTTGCTGTTCGGTGCGGCGGGTAATTTCAAATCCATCTTTAGTAG.......................................................................................ATTGACGAGGAGAATCAGAGATGAAGTATGTGTTGGTTACAGGAGGAGTGGTTAGCGGGCTCGGTAAAGGAGTTACCGCCAGTAGTATCGGTCTTATCCTTAAGTGCTGTGGTCTTCGCGTTACTTCCATTAAGATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTTACTTGAACACTGATGCTGGAACAATGTCTCCATTTGAGCATGGAGAAGTATTTGTCTTGGACGATGGTGGAGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGACCTAGACCTTGGTAACTATGAACGCTTTCTGGATATTAAGTTGACACGTGACAACAATATAACTACTGGAAAAATTTACCAG........................................................................................................................TCTGTTCTTGATAAGGAGAGAAAAGGAGATTATTTGGGGAAGACTGTTCAG......................................................................GTCGTCCCTCACATTACAGATGCCATTCAAGAGTGGATTGAACGTGTGGCTGTCATACCAGTTGATGGAGAGGATAGTCCAGCTGATGTTTGTGTTATAGAACTGGGTGGAACTATAG.................................................................................GAGATATTGAGTCTATGCCATTTATTGAAGCTTTAGGACAATTCTCATATCGTGTAG.............................................................................................................................GTGCTGGAAATTTTTGCTTGATACATGTCAGCCTTGTGCCCGTTTTGAATGTAGTTGGTGAGCAG......................................................................................AAAACAAAGCCAACTCAACACAGCGTCAGGGGTTTGAGAAGCCTGGGACTGACTCCAAATATTTTAGCCTGCCGGAGCACAACG.............................................................................................................................................................................GCACTTGATGATAACGTGAAGGAGAAACTTTCCCGTTTTTGCCATGTTCCG.................................................................................................................GTTGATAGCATCATCAGTCTTTATGATGCTTCAAACATTTGGCGAGTTCCTTTGATTTTAAGA..........................................................................................GACCAGAAGGCCCATGAAGCAATTCTGAAAGTGCTGAATCTTAAAGG..................................................................................................................................................AGTTGCTCGGGAACCTGTCTTTGGAGAATGGACATCTCGGACTGAACTTTGTGACAGACTACATGAGCCA.......................................................................GTTAGAGTTGCCATGGTGGGAAAGTACACTGGACTTTCAGATTCGTATCTCTCAGTACTGAAG.....................................................................................................................................................................................................................................................................................GCTCTTTTGCATTCCTCTGTAGCTTGCCGCAGGAAACTCTTTGTCGATTGGGTTCCAGCCAGTGACCTTGAAAATGAAACTGCCAAAGAG.......................................................................AATCCTGAAAATTATAGAAATTCGTGGAATTTGCTGAAG..............................................................................................................GGGGCGGATGCTGTACTAGTTCCCGGAGGATTTGGTGATAGAGGTGTGGAGGGTAAAATACTTGCTGCCAAATACGCACGTGAAAACAGGATTCCTTACCTGGGCATATGTTTAGGCATGCAAATTGCTGTTATTGAGTATGCTAGATCTATTCTTGGGTTGCAAGATGCGAACAGTACAGAGTTTGATCCCAACACTCCGAATCCTTGTGTAATTTTCATGCCGGAG...........................................................................................................GGTTCAAAAACGCATATGGGGGGTACAATGCGTCTTGGATCAAGAAGAACTTATTTTCAAGTCAGAGATTCTAAATCTACAAAATT................................................................................................................ATTTGGCAACCAGAGCTTTGTAGATGAGAGGCACCGTCATAGATATGAG.................................................................................................................................................GTGAATCCTGATATGGTGCAGCAATTTGAAGATGCTGGCCTTTCTTTCACTGGCAAAGATGAAACTGGTCGTCGCATGGAG.................................................................................ATTGTTGAGCTGCCTAATCATCCGTACTTTATTGGCGTTCAATTTCATCCTGAATTTAAATCAAGGCCAGGAAAACCGTCTGCCGTGTTCTTAG................................................................................................................................................................................................................................................................................................................................GGCTTATAGCAGCAGCATGCGGGCAGCTTGATTGTCTCCTGAAGAAGGGTGGAACACCGACTCATGGACTTAGCAATGGTACAGCATCTGGCGAAAAATTGCATCGAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E328207" ref_strand="+" ref_description="SGN-E328207 [cTOC-21-I24]">
      <seq>atcattctctcctaccattcttccttctcctttgccattctcttttccttcatatctcagcaaagtttacacacagcttgctgttcggtgcggcgggtaatttcaaatccatctttagtagattgacgaggagaatcagagatgaagtatgtgttggttacaggaggagtggttagcgggctcggtaaaggagttaccgccagtagtatcggtcttatccttaagtgctgtggtcttcgcgttacttccattaagatagatccttacttgaacactgatgctggaacaatgtctccatttgagcatggagaagtatttgtcttggacgatggtggagaggtggacctagaccttggtaactatgaacgctttctggatattaagttgacacgtgacaacaatataactactggaaaaatttaccagtctgttcttgataaggagagaaaaggagattatttggggaagactgttcaggtcgtccctcacattacagatgccattcaagagtggattgaacgtgtggctgtcataccagttgatggagaggatagtccagctgatgtttgtgttatagaactgggtggaactatangagatattgagtctatgccatttattgaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="93876" stop="96671"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94176" g_stop="94296" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94297" i_stop="94383" i_length="87">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.939" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94384" g_stop="94521" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="259" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="94522" i_stop="95316" i_length="795">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95317" g_stop="95396" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="339" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95397" i_stop="95814" i_length="418">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95815" g_stop="95901" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="426" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="95902" i_stop="96021" i_length="120">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="96022" g_stop="96072" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="477" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="96073" i_stop="96142" i_length="70">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="96143" g_stop="96260" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="478" r_stop="595" r_length="118" r_score="0.992"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="96261" i_stop="96341" i_length="81">
            <donor d_prob="0.882" d_score="0.98"/>
            <acceptor a_prob="0.958" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="96342" g_stop="96371" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="596" r_stop="625" r_length="30" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E328207" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>625</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E328207" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94176" e_stop="94296"/>
          <exon e_start="94384" e_stop="94521"/>
          <exon e_start="95317" e_stop="95396"/>
          <exon e_start="95815" e_stop="95901"/>
          <exon e_start="96022" e_stop="96072"/>
          <exon e_start="96143" e_stop="96260"/>
          <exon e_start="96342" e_stop="96371"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCATTCTCTCCTACCATTCTTCCTTCTCCTTTGCCATTCTCTTTTCCTTCATATCTCAGCAAAGTTTACACACAGCTTGCTGTTCGGTGCGGCGGGTAATTTCAAATCCATCTTTAGTAGGTAAAGCTAATTGCTATGTATATATTCTCTCTACATTCTAAGTTTCTGCAGCGAAAACAGTTGATATAGTGTTACTATTCATTGTAGATTGACGAGGAGAATCAGAGATGAAGTATGTGTTGGTTACAGGAGGAGTGGTTAGCGGGCTCGGTAAAGGAGTTACCGCCAGTAGTATCGGTCTTATCCTTAAGTGCTGTGGTCTTCGCGTTACTTCCATTAAGATAGGTTTGTTTCAGCTGATTTTATAATATATATATACCCTGTTTCTTGTAACAGACTAACAGAGTCATTTTACTCTGGTCTATGTGAATGGGAATTTTGGGCCAAGAGAATATTATTGTTATTTTTTGAAAAAAACTTTTCGGACGAAATCTTGAACTACTATTTGTGCAAAGGAGAAGCCAAGAAACTTAATAAGTTTTCCTTAACTAGGCAGCAATGCTTTTCTTTATCTTCTTTTTGTGGCATCGATGCTAAGTTGGTTAAATATCAAGCATTTTCTTGATCATAAACCATTTACTACCCCAAACTTAATTGTATTTTTGAACTTTTCGACGGAATCTTGAACTACTGTTTGTGCAAAGGAGAAGCCAAGAAAGTTGATAATTTTTTTTGTGTTAGGGAGCATGGCTTTTCTTTATGTTCTTCGTGTAGTATGCATGCTAAGTTGGTAAAGTTTCAAGAATTTTTTTGATCAGAAACCATTTACCATCCCAACCCTAATTGTATTTTTAAATTTTTCTAACGGAACCTTAAACTACTCTTTGTACAAAGAAGAAGCCAAGAAAGTTGATAAGTTTTCCTTGTTAGGGAGCATTGCTTTTCGTTAGGTTCCTTATGTGGCATCGATGCTAAGTTGGTAAAGTTTCAAGCATTTTCTTTATCAGAAACCATTTACTAACCAACCCTAATTGTATTTGTTCTGACAAGCTGTTTTTGGTTTGTTTGTTCTTAACAAGTTATATTAATTGTCATGGTATGTATCTATTCTGCTTTTTCATCGGATTTCCCTTGTTTCAGATCCTTACTTGAACACTGATGCTGGAACAATGTCTCCATTTGAGCATGGAGAAGTATTTGTCTTGGACGATGGTGGAGAGGTTAGTCAGTAATCTTTCACATTATCAATTCATTAGTGCTTTTCTGTGCTGAAATAGATTTTGTTTCATCTTCTCTCTAGACATCTGTAGAGGTGAGGTGGAGTGGTCAGAGCTGGAACAAGTTCTTTAAACTTTGAACTTATAAATGTGATATCTTGCAGTATAGTCTTTCTAGCTTGACCTTAACATGTTACTTAATTTTCTGATCGCGGCTCTCTTCCCTGATAGTGTTACTCATAGCTCTTGTTTTTCATTTAGGGGAAAAACTTCCGATTGCTCTGTTTTATTGTTATTGTGTCAACTTTTATATAGAGAGAGTAGAGACAAACATTATTGTTTTTAGACTCAGGAAAGATGAAGTGGAATTTATTTGTGTCGATGCCTATAGATAATTGCTTTATTTTCTTTGGTTTTGTAGGTGGACCTAGACCTTGGTAACTATGAACGCTTTCTGGATATTAAGTTGACACGTGACAACAATATAACTACTGGAAAAATTTACCAGGTATGTTGTCAATAATCGGAAATTTCTTCCTACAAGATTTTATGGATTCATGCTTCGTCAAATTCATGTAATGAAAGCAAAATGTTTAGCTTGAGAAACTGTTTGAATTTTCATTTTCAGTCTGTTCTTGATAAGGAGAGAAAAGGAGATTATTTGGGGAAGACTGTTCAGGTTTGTCGCTCTTCCAGAGTACATTTTCATTTATTAAGTTATACTGTTACTAATCTGCCCACTTGTTTAGGTCGTCCCTCACATTACAGATGCCATTCAAGAGTGGATTGAACGTGTGGCTGTCATACCAGTTGATGGAGAGGATAGTCCAGCTGATGTTTGTGTTATAGAACTGGGTGGAACTATAGGTATGGTCAAATGATGTTTGACAGTAGGCATGATAAGTTGTTTATGGATCTGTTTTCTCAAAGTAACTGATCCTTGTGCAGGAGATATTGAGTCTATGCCATTTATTGAAG</genome_strand>
        <mrna_strand>ATCATTCTCTCCTACCATTCTTCCTTCTCCTTTGCCATTCTCTTTTCCTTCATATCTCAGCAAAGTTTACACACAGCTTGCTGTTCGGTGCGGCGGGTAATTTCAAATCCATCTTTAGTAG.......................................................................................ATTGACGAGGAGAATCAGAGATGAAGTATGTGTTGGTTACAGGAGGAGTGGTTAGCGGGCTCGGTAAAGGAGTTACCGCCAGTAGTATCGGTCTTATCCTTAAGTGCTGTGGTCTTCGCGTTACTTCCATTAAGATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTTACTTGAACACTGATGCTGGAACAATGTCTCCATTTGAGCATGGAGAAGTATTTGTCTTGGACGATGGTGGAGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGACCTAGACCTTGGTAACTATGAACGCTTTCTGGATATTAAGTTGACACGTGACAACAATATAACTACTGGAAAAATTTACCAG........................................................................................................................TCTGTTCTTGATAAGGAGAGAAAAGGAGATTATTTGGGGAAGACTGTTCAG......................................................................GTCGTCCCTCACATTACAGATGCCATTCAAGAGTGGATTGAACGTGTGGCTGTCATACCAGTTGATGGAGAGGATAGTCCAGCTGATGTTTGTGTTATAGAACTGGGTGGAACTATAN.................................................................................GAGATATTGAGTCTATGCCATTTATTGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E324612" ref_strand="+" ref_description="SGN-E324612 [cTOC-9-I21]">
      <seq>atcattctctcctaccattcttccttctcctttgccattctcttttccttcatatctcagcaaagtttacacacagcttgctgttcggtgcggcgggtaatttcaaatccatctttagtagattgacgaggagaatcagagatgaagtatgtgttggttacaggaggagtggttagcgggctcggtaaaggagttaccgccagtagtatcggtcttatccttaagtgctgtggtcttcgcgttacttccattaagatagatccttacttgaacactgatgctggaacaatgtctccatttgagcatggagaagtatttgtcttggacgatggtggagaggtggacctagaccttggtaactatgaacgctttctggatattaagttgacacgtgacaacaatataactactggaaaaatttaccagtctgttcttgataaggagagaaaaggagattatttggggaagactgttcaagtcgtccctcacattacagatgccattcaagagtggattgaacgtgtggctgtcataccagttgatggagaggatagtccagctgatgtttgtgttatagaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="93876" stop="96546"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94176" g_stop="94296" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94297" i_stop="94383" i_length="87">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.939" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94384" g_stop="94521" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="259" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="94522" i_stop="95316" i_length="795">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95317" g_stop="95396" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="339" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95397" i_stop="95814" i_length="418">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95815" g_stop="95901" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="426" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="95902" i_stop="96021" i_length="120">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="96022" g_stop="96072" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="477" r_length="51" r_score="0.980"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="96073" i_stop="96142" i_length="70">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="96143" g_stop="96246" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="478" r_stop="581" r_length="104" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E324612" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>581</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E324612" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94176" e_stop="94296"/>
          <exon e_start="94384" e_stop="94521"/>
          <exon e_start="95317" e_stop="95396"/>
          <exon e_start="95815" e_stop="95901"/>
          <exon e_start="96022" e_stop="96072"/>
          <exon e_start="96143" e_stop="96246"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCATTCTCTCCTACCATTCTTCCTTCTCCTTTGCCATTCTCTTTTCCTTCATATCTCAGCAAAGTTTACACACAGCTTGCTGTTCGGTGCGGCGGGTAATTTCAAATCCATCTTTAGTAGGTAAAGCTAATTGCTATGTATATATTCTCTCTACATTCTAAGTTTCTGCAGCGAAAACAGTTGATATAGTGTTACTATTCATTGTAGATTGACGAGGAGAATCAGAGATGAAGTATGTGTTGGTTACAGGAGGAGTGGTTAGCGGGCTCGGTAAAGGAGTTACCGCCAGTAGTATCGGTCTTATCCTTAAGTGCTGTGGTCTTCGCGTTACTTCCATTAAGATAGGTTTGTTTCAGCTGATTTTATAATATATATATACCCTGTTTCTTGTAACAGACTAACAGAGTCATTTTACTCTGGTCTATGTGAATGGGAATTTTGGGCCAAGAGAATATTATTGTTATTTTTTGAAAAAAACTTTTCGGACGAAATCTTGAACTACTATTTGTGCAAAGGAGAAGCCAAGAAACTTAATAAGTTTTCCTTAACTAGGCAGCAATGCTTTTCTTTATCTTCTTTTTGTGGCATCGATGCTAAGTTGGTTAAATATCAAGCATTTTCTTGATCATAAACCATTTACTACCCCAAACTTAATTGTATTTTTGAACTTTTCGACGGAATCTTGAACTACTGTTTGTGCAAAGGAGAAGCCAAGAAAGTTGATAATTTTTTTTGTGTTAGGGAGCATGGCTTTTCTTTATGTTCTTCGTGTAGTATGCATGCTAAGTTGGTAAAGTTTCAAGAATTTTTTTGATCAGAAACCATTTACCATCCCAACCCTAATTGTATTTTTAAATTTTTCTAACGGAACCTTAAACTACTCTTTGTACAAAGAAGAAGCCAAGAAAGTTGATAAGTTTTCCTTGTTAGGGAGCATTGCTTTTCGTTAGGTTCCTTATGTGGCATCGATGCTAAGTTGGTAAAGTTTCAAGCATTTTCTTTATCAGAAACCATTTACTAACCAACCCTAATTGTATTTGTTCTGACAAGCTGTTTTTGGTTTGTTTGTTCTTAACAAGTTATATTAATTGTCATGGTATGTATCTATTCTGCTTTTTCATCGGATTTCCCTTGTTTCAGATCCTTACTTGAACACTGATGCTGGAACAATGTCTCCATTTGAGCATGGAGAAGTATTTGTCTTGGACGATGGTGGAGAGGTTAGTCAGTAATCTTTCACATTATCAATTCATTAGTGCTTTTCTGTGCTGAAATAGATTTTGTTTCATCTTCTCTCTAGACATCTGTAGAGGTGAGGTGGAGTGGTCAGAGCTGGAACAAGTTCTTTAAACTTTGAACTTATAAATGTGATATCTTGCAGTATAGTCTTTCTAGCTTGACCTTAACATGTTACTTAATTTTCTGATCGCGGCTCTCTTCCCTGATAGTGTTACTCATAGCTCTTGTTTTTCATTTAGGGGAAAAACTTCCGATTGCTCTGTTTTATTGTTATTGTGTCAACTTTTATATAGAGAGAGTAGAGACAAACATTATTGTTTTTAGACTCAGGAAAGATGAAGTGGAATTTATTTGTGTCGATGCCTATAGATAATTGCTTTATTTTCTTTGGTTTTGTAGGTGGACCTAGACCTTGGTAACTATGAACGCTTTCTGGATATTAAGTTGACACGTGACAACAATATAACTACTGGAAAAATTTACCAGGTATGTTGTCAATAATCGGAAATTTCTTCCTACAAGATTTTATGGATTCATGCTTCGTCAAATTCATGTAATGAAAGCAAAATGTTTAGCTTGAGAAACTGTTTGAATTTTCATTTTCAGTCTGTTCTTGATAAGGAGAGAAAAGGAGATTATTTGGGGAAGACTGTTCAGGTTTGTCGCTCTTCCAGAGTACATTTTCATTTATTAAGTTATACTGTTACTAATCTGCCCACTTGTTTAGGTCGTCCCTCACATTACAGATGCCATTCAAGAGTGGATTGAACGTGTGGCTGTCATACCAGTTGATGGAGAGGATAGTCCAGCTGATGTTTGTGTTATAGAACT</genome_strand>
        <mrna_strand>ATCATTCTCTCCTACCATTCTTCCTTCTCCTTTGCCATTCTCTTTTCCTTCATATCTCAGCAAAGTTTACACACAGCTTGCTGTTCGGTGCGGCGGGTAATTTCAAATCCATCTTTAGTAG.......................................................................................ATTGACGAGGAGAATCAGAGATGAAGTATGTGTTGGTTACAGGAGGAGTGGTTAGCGGGCTCGGTAAAGGAGTTACCGCCAGTAGTATCGGTCTTATCCTTAAGTGCTGTGGTCTTCGCGTTACTTCCATTAAGATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTTACTTGAACACTGATGCTGGAACAATGTCTCCATTTGAGCATGGAGAAGTATTTGTCTTGGACGATGGTGGAGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGACCTAGACCTTGGTAACTATGAACGCTTTCTGGATATTAAGTTGACACGTGACAACAATATAACTACTGGAAAAATTTACCAG........................................................................................................................TCTGTTCTTGATAAGGAGAGAAAAGGAGATTATTTGGGGAAGACTGTTCAA......................................................................GTCGTCCCTCACATTACAGATGCCATTCAAGAGTGGATTGAACGTGTGGCTGTCATACCAGTTGATGGAGAGGATAGTCCAGCTGATGTTTGTGTTATAGAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E249404" ref_strand="+" ref_description="SGN-E249404 [cLEF-50-J7]">
      <seq>tcttttccttcatatctcagcaaagtttacaccaccagcttgctgttcggtgcggcgggtaatttcaaatccatctttagtagattgacgaggagaatcagagatgaagtatgtgttggttacaggaggagtggttagcgggctcggtaaaggagttaccgccagtagtatcggtcttatccttaagtgctgtggtcttcgcgttacttccattaagatagatccttacttgaacactgatgctggaacaatgtctccatttgagcatggagaagtatttgtcttggacgatggtggagaggtggacctagaccttggtaactatgaacgctttctggatattaagttgacacgtgacaacaatataactactggaaaaatttaccagtctgttcttgataaggagagaaaaggagattatttggggaagactgttcaggtcgtccctcacattacagatgccattcaagagtggattgaacgtgtggctgtcataccagttgatggagaggatagtccagctgatgtttgtgttata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="93916" stop="96541"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94216" g_stop="94296" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="83" r_length="83" r_score="0.951"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94297" i_stop="94383" i_length="87">
            <donor d_prob="0.984" d_score="0.96"/>
            <acceptor a_prob="0.939" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94384" g_stop="94521" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="221" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="94522" i_stop="95316" i_length="795">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95317" g_stop="95396" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="301" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95397" i_stop="95814" i_length="418">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95815" g_stop="95901" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="388" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="95902" i_stop="96021" i_length="120">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="96022" g_stop="96072" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="439" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="96073" i_stop="96142" i_length="70">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="96143" g_stop="96241" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="440" r_stop="538" r_length="99" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E249404" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E249404" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94216" e_stop="94296"/>
          <exon e_start="94384" e_stop="94521"/>
          <exon e_start="95317" e_stop="95396"/>
          <exon e_start="95815" e_stop="95901"/>
          <exon e_start="96022" e_stop="96072"/>
          <exon e_start="96143" e_stop="96241"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTTCCTTCATATCTCAGCAAAGTTTACA-CA-CAGCTTGCTGTTCGGTGCGGCGGGTAATTTCAAATCCATCTTTAGTAGGTAAAGCTAATTGCTATGTATATATTCTCTCTACATTCTAAGTTTCTGCAGCGAAAACAGTTGATATAGTGTTACTATTCATTGTAGATTGACGAGGAGAATCAGAGATGAAGTATGTGTTGGTTACAGGAGGAGTGGTTAGCGGGCTCGGTAAAGGAGTTACCGCCAGTAGTATCGGTCTTATCCTTAAGTGCTGTGGTCTTCGCGTTACTTCCATTAAGATAGGTTTGTTTCAGCTGATTTTATAATATATATATACCCTGTTTCTTGTAACAGACTAACAGAGTCATTTTACTCTGGTCTATGTGAATGGGAATTTTGGGCCAAGAGAATATTATTGTTATTTTTTGAAAAAAACTTTTCGGACGAAATCTTGAACTACTATTTGTGCAAAGGAGAAGCCAAGAAACTTAATAAGTTTTCCTTAACTAGGCAGCAATGCTTTTCTTTATCTTCTTTTTGTGGCATCGATGCTAAGTTGGTTAAATATCAAGCATTTTCTTGATCATAAACCATTTACTACCCCAAACTTAATTGTATTTTTGAACTTTTCGACGGAATCTTGAACTACTGTTTGTGCAAAGGAGAAGCCAAGAAAGTTGATAATTTTTTTTGTGTTAGGGAGCATGGCTTTTCTTTATGTTCTTCGTGTAGTATGCATGCTAAGTTGGTAAAGTTTCAAGAATTTTTTTGATCAGAAACCATTTACCATCCCAACCCTAATTGTATTTTTAAATTTTTCTAACGGAACCTTAAACTACTCTTTGTACAAAGAAGAAGCCAAGAAAGTTGATAAGTTTTCCTTGTTAGGGAGCATTGCTTTTCGTTAGGTTCCTTATGTGGCATCGATGCTAAGTTGGTAAAGTTTCAAGCATTTTCTTTATCAGAAACCATTTACTAACCAACCCTAATTGTATTTGTTCTGACAAGCTGTTTTTGGTTTGTTTGTTCTTAACAAGTTATATTAATTGTCATGGTATGTATCTATTCTGCTTTTTCATCGGATTTCCCTTGTTTCAGATCCTTACTTGAACACTGATGCTGGAACAATGTCTCCATTTGAGCATGGAGAAGTATTTGTCTTGGACGATGGTGGAGAGGTTAGTCAGTAATCTTTCACATTATCAATTCATTAGTGCTTTTCTGTGCTGAAATAGATTTTGTTTCATCTTCTCTCTAGACATCTGTAGAGGTGAGGTGGAGTGGTCAGAGCTGGAACAAGTTCTTTAAACTTTGAACTTATAAATGTGATATCTTGCAGTATAGTCTTTCTAGCTTGACCTTAACATGTTACTTAATTTTCTGATCGCGGCTCTCTTCCCTGATAGTGTTACTCATAGCTCTTGTTTTTCATTTAGGGGAAAAACTTCCGATTGCTCTGTTTTATTGTTATTGTGTCAACTTTTATATAGAGAGAGTAGAGACAAACATTATTGTTTTTAGACTCAGGAAAGATGAAGTGGAATTTATTTGTGTCGATGCCTATAGATAATTGCTTTATTTTCTTTGGTTTTGTAGGTGGACCTAGACCTTGGTAACTATGAACGCTTTCTGGATATTAAGTTGACACGTGACAACAATATAACTACTGGAAAAATTTACCAGGTATGTTGTCAATAATCGGAAATTTCTTCCTACAAGATTTTATGGATTCATGCTTCGTCAAATTCATGTAATGAAAGCAAAATGTTTAGCTTGAGAAACTGTTTGAATTTTCATTTTCAGTCTGTTCTTGATAAGGAGAGAAAAGGAGATTATTTGGGGAAGACTGTTCAGGTTTGTCGCTCTTCCAGAGTACATTTTCATTTATTAAGTTATACTGTTACTAATCTGCCCACTTGTTTAGGTCGTCCCTCACATTACAGATGCCATTCAAGAGTGGATTGAACGTGTGGCTGTCATACCAGTTGATGGAGAGGATAGTCCAGCTGATGTTTGTGTTATA</genome_strand>
        <mrna_strand>TCTTTTCCTTCATATCTCAGCAAAGTTTACACCACCAGCTTGCTGTTCGGTGCGGCGGGTAATTTCAAATCCATCTTTAGTAG.......................................................................................ATTGACGAGGAGAATCAGAGATGAAGTATGTGTTGGTTACAGGAGGAGTGGTTAGCGGGCTCGGTAAAGGAGTTACCGCCAGTAGTATCGGTCTTATCCTTAAGTGCTGTGGTCTTCGCGTTACTTCCATTAAGATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTTACTTGAACACTGATGCTGGAACAATGTCTCCATTTGAGCATGGAGAAGTATTTGTCTTGGACGATGGTGGAGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGACCTAGACCTTGGTAACTATGAACGCTTTCTGGATATTAAGTTGACACGTGACAACAATATAACTACTGGAAAAATTTACCAG........................................................................................................................TCTGTTCTTGATAAGGAGAGAAAAGGAGATTATTTGGGGAAGACTGTTCAG......................................................................GTCGTCCCTCACATTACAGATGCCATTCAAGAGTGGATTGAACGTGTGGCTGTCATACCAGTTGATGGAGAGGATAGTCCAGCTGATGTTTGTGTTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E208104" ref_strand="+" ref_description="SGN-E208104 [cLEC-34-D4]">
      <seq>gaggtggacctagaccttggtaactatgaacgctttctggatattaagttgacacgtgacaacaatataactactggaaaaatttaccagtctgttcttgataaggagagaaaaggagattatttggggaagactgttcaggtcgtccctcacattacagatgccattcaagagtggattgaacgtgtggctgtcataccagttgatggagaggatagtccagctgatgtttgtgttatagaactgggtggaactataggagatattgagtctatgccatttattgaagctttaggacaattctcatatcgtgtaggtgctggaaatttttgcttgatacatgtcagccttgtgcccgttttgaatgtagttggtgagcagaaaacaaagccaactcaacacagcgtcaggggtttgagaagcctgggactgactccaaatattttagcctgccggagcacaacggcacttgatgataacgtgaaggagaaactttcccgtttttgccatgttccggttgatagcatcatcagtctttatgatgcttcaaacatttggcgagttcctttgattttaagagaccagaaggcccatgaagcaattctgaaagtgctgaatcttaaaggagttgctcgggaacctgtctttggagaatggaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="95513" stop="97775"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95812" g_stop="95901" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="90" r_length="90" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95902" i_stop="96021" i_length="120">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96022" g_stop="96072" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="141" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96073" i_stop="96142" i_length="70">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96143" g_stop="96260" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="259" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="96261" i_stop="96341" i_length="81">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="96342" g_stop="96398" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="316" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="96399" i_stop="96523" i_length="125">
            <donor d_prob="0.765" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="96524" g_stop="96588" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="381" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="96589" i_stop="96674" i_length="86">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="96675" g_stop="96758" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="465" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="96759" i_stop="96931" i_length="173">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="96932" g_stop="96982" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="516" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="96983" i_stop="97095" i_length="113">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="97096" g_stop="97158" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="517" r_stop="579" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="97159" i_stop="97248" i_length="90">
            <donor d_prob="0.317" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="97249" g_stop="97295" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="580" r_stop="626" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="97296" i_stop="97441" i_length="146">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="97442" g_stop="97475" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="627" r_stop="660" r_length="34" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E208104" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E208104" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95812" e_stop="95901"/>
          <exon e_start="96022" e_stop="96072"/>
          <exon e_start="96143" e_stop="96260"/>
          <exon e_start="96342" e_stop="96398"/>
          <exon e_start="96524" e_stop="96588"/>
          <exon e_start="96675" e_stop="96758"/>
          <exon e_start="96932" e_stop="96982"/>
          <exon e_start="97096" e_stop="97158"/>
          <exon e_start="97249" e_stop="97295"/>
          <exon e_start="97442" e_stop="97475"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGTGGACCTAGACCTTGGTAACTATGAACGCTTTCTGGATATTAAGTTGACACGTGACAACAATATAACTACTGGAAAAATTTACCAGGTATGTTGTCAATAATCGGAAATTTCTTCCTACAAGATTTTATGGATTCATGCTTCGTCAAATTCATGTAATGAAAGCAAAATGTTTAGCTTGAGAAACTGTTTGAATTTTCATTTTCAGTCTGTTCTTGATAAGGAGAGAAAAGGAGATTATTTGGGGAAGACTGTTCAGGTTTGTCGCTCTTCCAGAGTACATTTTCATTTATTAAGTTATACTGTTACTAATCTGCCCACTTGTTTAGGTCGTCCCTCACATTACAGATGCCATTCAAGAGTGGATTGAACGTGTGGCTGTCATACCAGTTGATGGAGAGGATAGTCCAGCTGATGTTTGTGTTATAGAACTGGGTGGAACTATAGGTATGGTCAAATGATGTTTGACAGTAGGCATGATAAGTTGTTTATGGATCTGTTTTCTCAAAGTAACTGATCCTTGTGCAGGAGATATTGAGTCTATGCCATTTATTGAAGCTTTAGGACAATTCTCATATCGTGTAGGTAAGGTTGCAAGTCCAAGTTTGAACTATGACATCACCATATAATGTATTTTGTGCCCCAGGAAATGCAACTGTTAATTTTAGTGCTTGAATGCAATAAAAAAATTTCAATTTGTTGCTTCTTAGGTGCTGGAAATTTTTGCTTGATACATGTCAGCCTTGTGCCCGTTTTGAATGTAGTTGGTGAGCAGGTAGCTTCTGATCAAAGTGTATTTACATGAATCTTCCCTTTAAAGTAACTAGTTAGTTGAGTGCCTAAGCTTTTTTTAATATTCAGAAAACAAAGCCAACTCAACACAGCGTCAGGGGTTTGAGAAGCCTGGGACTGACTCCAAATATTTTAGCCTGCCGGAGCACAACGGTCTCTCTCTCTCTCGCTTTCGCTCTCTACATATATATATTTATATATTACTCTCTAAGTGTGTCTTTTCATCAGCTTTCTCTCTCGCTATCTACATATATACCATTTGTCTTTCTTTTGTCAGATGTTTAGGTTTGTCAAGTTCAGCTTTTGAAGTTTGTTTTCTTATTTAGGCACTTGATGATAACGTGAAGGAGAAACTTTCCCGTTTTTGCCATGTTCCGGTATTGTTTTCTTTCTCTATACAATCTATATCTCCGAACACCTATATCTTTTATCTGGCCATCTATTATATGTGATTCCCTGTTGCTGAAGTTCTGTGTATCTTGGTTTCCAGGTTGATAGCATCATCAGTCTTTATGATGCTTCAAACATTTGGCGAGTTCCTTTGATTTTAAGAGTGAGTAGTGTTGGTACTCTTATTTTGATGTTTTTGCATAAATTTTCAGAGTGAGTTTTAAGAAAAAAAGTATTTTCTTCGTTGGACCAGGACCAGAAGGCCCATGAAGCAATTCTGAAAGTGCTGAATCTTAAAGGGTAATGCCTGATGAGCTCCACTTCAAATGTCTTTCGTTTCTGTTATGTACATTAATGACATATAGTCTTCAATCTTCAGCTTTTAGTATCTTCACTTTTGTGACATTTCGTGTATGGTAATATATTTTGGTTTTTGTCATTTGTAGAGTTGCTCGGGAACCTGTCTTTGGAGAATGGACA</genome_strand>
        <mrna_strand>GAGGTGGACCTAGACCTTGGTAACTATGAACGCTTTCTGGATATTAAGTTGACACGTGACAACAATATAACTACTGGAAAAATTTACCAG........................................................................................................................TCTGTTCTTGATAAGGAGAGAAAAGGAGATTATTTGGGGAAGACTGTTCAG......................................................................GTCGTCCCTCACATTACAGATGCCATTCAAGAGTGGATTGAACGTGTGGCTGTCATACCAGTTGATGGAGAGGATAGTCCAGCTGATGTTTGTGTTATAGAACTGGGTGGAACTATAG.................................................................................GAGATATTGAGTCTATGCCATTTATTGAAGCTTTAGGACAATTCTCATATCGTGTAG.............................................................................................................................GTGCTGGAAATTTTTGCTTGATACATGTCAGCCTTGTGCCCGTTTTGAATGTAGTTGGTGAGCAG......................................................................................AAAACAAAGCCAACTCAACACAGCGTCAGGGGTTTGAGAAGCCTGGGACTGACTCCAAATATTTTAGCCTGCCGGAGCACAACG.............................................................................................................................................................................GCACTTGATGATAACGTGAAGGAGAAACTTTCCCGTTTTTGCCATGTTCCG.................................................................................................................GTTGATAGCATCATCAGTCTTTATGATGCTTCAAACATTTGGCGAGTTCCTTTGATTTTAAGA..........................................................................................GACCAGAAGGCCCATGAAGCAATTCTGAAAGTGCTGAATCTTAAAGG..................................................................................................................................................AGTTGCTCGGGAACCTGTCTTTGGAGAATGGACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E252055" ref_strand="+" ref_description="SGN-E252055 [cLEG-8-L11]">
      <seq>agatattgagtctatgccatttattgaagctttaggacaattctcatatcgtgtaggtgctggaaatttttgcttgatacatgtcagccttgtgcccgttttgaatgtagttggtgagcagaaaacaaagccaactcaacacagcgtcaggggtttgagaagcctgggactgactccaaatattttagcctgccggagcacaacggcacttgatgataacgtgaaggagaaactttcccgtttttgccatgttccggttgatagcatcatcagtctttatgatgcttcaaacatttggcgagttcctttgattttaagagaccagaaggcccatgaagcaattctgaaagtgctgaatcttaaagggagttnttgctcgggaacctgtctttggagaatggacatctcggactgaactttgtgacagactacatgagccagttagagttgccatggtgggaaagtacactggactttcagattcgtatctctcagtactgaaggctcttttgcattcctctgtagcttgccgcaggaaactctttgtcgattgggttccagccagtgaccttgaaaatgaaactgccaaagagaatcctgaaaattatagaaattcgtggaatttgctgaagggggcggatgctgtact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="96043" stop="98549"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96343" g_stop="96398" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96399" i_stop="96523" i_length="125">
            <donor d_prob="0.765" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96524" g_stop="96588" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="121" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96589" i_stop="96674" i_length="86">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96675" g_stop="96758" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="205" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="96759" i_stop="96931" i_length="173">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="96932" g_stop="96982" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="256" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="96983" i_stop="97095" i_length="113">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="97096" g_stop="97158" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="319" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="97159" i_stop="97248" i_length="90">
            <donor d_prob="0.317" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="97249" g_stop="97300" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="370" r_length="51" r_score="0.962"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="97301" i_stop="97441" i_length="141">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="97442" g_stop="97511" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="371" r_stop="440" r_length="70" r_score="0.971"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="97512" i_stop="97582" i_length="71">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="97583" g_stop="97645" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="503" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="97646" i_stop="97922" i_length="277">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="97923" g_stop="98012" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="504" r_stop="593" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="98013" i_stop="98083" i_length="71">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="98084" g_stop="98122" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="594" r_stop="632" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="98123" i_stop="98232" i_length="110">
            <donor d_prob="0.043" d_score="0.00"/>
            <acceptor a_prob="0.983" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="98233" g_stop="98249" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="633" r_stop="649" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E252055" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>650</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E252055" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96343" e_stop="96398"/>
          <exon e_start="96524" e_stop="96588"/>
          <exon e_start="96675" e_stop="96758"/>
          <exon e_start="96932" e_stop="96982"/>
          <exon e_start="97096" e_stop="97158"/>
          <exon e_start="97249" e_stop="97300"/>
          <exon e_start="97442" e_stop="97511"/>
          <exon e_start="97583" e_stop="97645"/>
          <exon e_start="97923" e_stop="98012"/>
          <exon e_start="98084" e_stop="98122"/>
          <exon e_start="98233" e_stop="98249"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATATTGAGTCTATGCCATTTATTGAAGCTTTAGGACAATTCTCATATCGTGTAGGTAAGGTTGCAAGTCCAAGTTTGAACTATGACATCACCATATAATGTATTTTGTGCCCCAGGAAATGCAACTGTTAATTTTAGTGCTTGAATGCAATAAAAAAATTTCAATTTGTTGCTTCTTAGGTGCTGGAAATTTTTGCTTGATACATGTCAGCCTTGTGCCCGTTTTGAATGTAGTTGGTGAGCAGGTAGCTTCTGATCAAAGTGTATTTACATGAATCTTCCCTTTAAAGTAACTAGTTAGTTGAGTGCCTAAGCTTTTTTTAATATTCAGAAAACAAAGCCAACTCAACACAGCGTCAGGGGTTTGAGAAGCCTGGGACTGACTCCAAATATTTTAGCCTGCCGGAGCACAACGGTCTCTCTCTCTCTCGCTTTCGCTCTCTACATATATATATTTATATATTACTCTCTAAGTGTGTCTTTTCATCAGCTTTCTCTCTCGCTATCTACATATATACCATTTGTCTTTCTTTTGTCAGATGTTTAGGTTTGTCAAGTTCAGCTTTTGAAGTTTGTTTTCTTATTTAGGCACTTGATGATAACGTGAAGGAGAAACTTTCCCGTTTTTGCCATGTTCCGGTATTGTTTTCTTTCTCTATACAATCTATATCTCCGAACACCTATATCTTTTATCTGGCCATCTATTATATGTGATTCCCTGTTGCTGAAGTTCTGTGTATCTTGGTTTCCAGGTTGATAGCATCATCAGTCTTTATGATGCTTCAAACATTTGGCGAGTTCCTTTGATTTTAAGAGTGAGTAGTGTTGGTACTCTTATTTTGATGTTTTTGCATAAATTTTCAGAGTGAGTTTTAAGAAAAAAAGTATTTTCTTCGTTGGACCAGGACCAGAAGGCCCATGAAGCAATTCTGAAAGTGCTGAATCTTAAAGGGTAATGCCTGATGAGCTCCACTTCAAATGTCTTTCGTTTCTGTTATGTACATTAATGACATATAGTCTTCAATCTTCAGCTTTTAGTATCTTCACTTTTGTGACATTTCGTGTATGGTAATATATTTTGGTTTTTGTCATTTGTAGAGTTGCTCGGGAACCTGTCTTTGGAGAATGGACATCTCGGACTGAACTTTGTGACAGACTACATGAGCCAGTATGTCACAGGATATATATGCTAATTCTCTTTCCCTTTAGGAGTTTATCTCATATTTGCCATCCATACAGGTTAGAGTTGCCATGGTGGGAAAGTACACTGGACTTTCAGATTCGTATCTCTCAGTACTGAAGGTGAATATCTCATGTAGACTTCTCTTAAGTCAAATCTAGATCAACTGACACTTTTTACTTGCTCTTATCTACTCATGTGATTTTTGTTGTGTTTATGTGGTTAGCCCCTCAAACACTTTCCAGTATAGAATAAACAAACACTTTCCTCTGCTCTAATGCGCTTCTCGTTTTGATCTCATTACTTTTAGGCAATTGCTGTAGTCTGTCTTTTTTAAATTCATATAGTTTCTCCCTAGAGTTAATAACCATCTGTTTGATTTATTGTTTGTCCTTTCAGGCTCTTTTGCATTCCTCTGTAGCTTGCCGCAGGAAACTCTTTGTCGATTGGGTTCCAGCCAGTGACCTTGAAAATGAAACTGCCAAAGAGGTATTTTTTTGTCTGTCTTTGTGTTGCTTTATATCTTGTATGACAAGCTGACTTTTAACTTCCAATTGCAGAATCCTGAAAATTATAGAAATTCGTGGAATTTGCTGAAGGTTCGGATAGTCTGATTCCTCAACGTTATATGATAGCTGAGCTTACTTTAGTACCCCTACTTAGTCTTATATACTCTTGTGACGTCTGACGGAGAGTCATCTGTTAATAGGGGGCGGATGCTGTACT</genome_strand>
        <mrna_strand>AGATATTGAGTCTATGCCATTTATTGAAGCTTTAGGACAATTCTCATATCGTGTAG.............................................................................................................................GTGCTGGAAATTTTTGCTTGATACATGTCAGCCTTGTGCCCGTTTTGAATGTAGTTGGTGAGCAG......................................................................................AAAACAAAGCCAACTCAACACAGCGTCAGGGGTTTGAGAAGCCTGGGACTGACTCCAAATATTTTAGCCTGCCGGAGCACAACG.............................................................................................................................................................................GCACTTGATGATAACGTGAAGGAGAAACTTTCCCGTTTTTGCCATGTTCCG.................................................................................................................GTTGATAGCATCATCAGTCTTTATGATGCTTCAAACATTTGGCGAGTTCCTTTGATTTTAAGA..........................................................................................GACCAGAAGGCCCATGAAGCAATTCTGAAAGTGCTGAATCTTAAAGGG-AGT.............................................................................................................................................TNTTGCTCGGGAACCTGTCTTTGGAGAATGGACATCTCGGACTGAACTTTGTGACAGACTACATGAGCCA.......................................................................GTTAGAGTTGCCATGGTGGGAAAGTACACTGGACTTTCAGATTCGTATCTCTCAGTACTGAAG.....................................................................................................................................................................................................................................................................................GCTCTTTTGCATTCCTCTGTAGCTTGCCGCAGGAAACTCTTTGTCGATTGGGTTCCAGCCAGTGACCTTGAAAATGAAACTGCCAAAGAG.......................................................................AATCCTGAAAATTATAGAAATTCGTGGAATTTGCTGAAG..............................................................................................................GGGGCGGATGCTGTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E319359" ref_strand="+" ref_description="SGN-E319359 [cTOB-15-O17]">
      <seq>ttagagttgccatggtgggaaagtacactggactttcagattcgtatctctcagtactgaaggctcttttgcattcctctgtagcttgccgcaggaaactctttgtcgattgggttccagccagtgaccttgaaaatgaaactgccaaagagaatcctgaaaattatagaaattcgtggaatttgctgaagggggcggatgctgtactagttcccggaggatttggtgatagaggtgtggagggtaaaatacttgctgccaaatacgcacgtgaaaacaggattccttacctgggcatatgtttaggcatgcaaattgctgttattgagtatgctagatctattcttgggttgcaagatgcgaacagtacagagtttgatcccaacactccgaatccttgtgtaattttcatgccggagggttcaaaaacgcatatggggggtacaatgcgtcttggatcaagaagaacttattttcaagtcagagattctaaatctacaaaattatttggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="97284" stop="98955"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97584" g_stop="97645" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="97646" i_stop="97922" i_length="277">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97923" g_stop="98012" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="152" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98013" i_stop="98083" i_length="71">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98084" g_stop="98122" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="191" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98123" i_stop="98232" i_length="110">
            <donor d_prob="0.043" d_score="0.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98233" g_stop="98460" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="419" r_length="228" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98461" i_stop="98567" i_length="107">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98568" g_stop="98653" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="505" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="98654" i_stop="98765" i_length="112">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.921" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98766" g_stop="98772" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="512" r_length="7" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E319359" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E319359" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97584" e_stop="97645"/>
          <exon e_start="97923" e_stop="98012"/>
          <exon e_start="98084" e_stop="98122"/>
          <exon e_start="98233" e_stop="98460"/>
          <exon e_start="98568" e_stop="98653"/>
          <exon e_start="98766" e_stop="98772"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGAGTTGCCATGGTGGGAAAGTACACTGGACTTTCAGATTCGTATCTCTCAGTACTGAAGGTGAATATCTCATGTAGACTTCTCTTAAGTCAAATCTAGATCAACTGACACTTTTTACTTGCTCTTATCTACTCATGTGATTTTTGTTGTGTTTATGTGGTTAGCCCCTCAAACACTTTCCAGTATAGAATAAACAAACACTTTCCTCTGCTCTAATGCGCTTCTCGTTTTGATCTCATTACTTTTAGGCAATTGCTGTAGTCTGTCTTTTTTAAATTCATATAGTTTCTCCCTAGAGTTAATAACCATCTGTTTGATTTATTGTTTGTCCTTTCAGGCTCTTTTGCATTCCTCTGTAGCTTGCCGCAGGAAACTCTTTGTCGATTGGGTTCCAGCCAGTGACCTTGAAAATGAAACTGCCAAAGAGGTATTTTTTTGTCTGTCTTTGTGTTGCTTTATATCTTGTATGACAAGCTGACTTTTAACTTCCAATTGCAGAATCCTGAAAATTATAGAAATTCGTGGAATTTGCTGAAGGTTCGGATAGTCTGATTCCTCAACGTTATATGATAGCTGAGCTTACTTTAGTACCCCTACTTAGTCTTATATACTCTTGTGACGTCTGACGGAGAGTCATCTGTTAATAGGGGGCGGATGCTGTACTAGTTCCCGGAGGATTTGGTGATAGAGGTGTGGAGGGTAAAATACTTGCTGCCAAATACGCACGTGAAAACAGGATTCCTTACCTGGGCATATGTTTAGGCATGCAAATTGCTGTTATTGAGTATGCTAGATCTATTCTTGGGTTGCAAGATGCGAACAGTACAGAGTTTGATCCCAACACTCCGAATCCTTGTGTAATTTTCATGCCGGAGGTTAAGTTCTGACACTTCCCGTTAATCATGAATTTTTCTCATGACTTTTATGTATTTTAGGTCTCATTTTAGTACTGTCTATATTAATCTGTAGACCATATTCACAGGGTTCAAAAACGCATATGGGGGGTACAATGCGTCTTGGATCAAGAAGAACTTATTTTCAAGTCAGAGATTCTAAATCTACAAAATTGTAAGTACTTCCTTTCCTCCAACCGCACTGCATTGGCTATATTTTGATTTGAAGCCATTCTTGGAGGGCTTCTATTGATATTACCAAGTGGCTAAACTATATCTTTTCTCAGATTTGGC</genome_strand>
        <mrna_strand>TTAGAGTTGCCATGGTGGGAAAGTACACTGGACTTTCAGATTCGTATCTCTCAGTACTGAAG.....................................................................................................................................................................................................................................................................................GCTCTTTTGCATTCCTCTGTAGCTTGCCGCAGGAAACTCTTTGTCGATTGGGTTCCAGCCAGTGACCTTGAAAATGAAACTGCCAAAGAG.......................................................................AATCCTGAAAATTATAGAAATTCGTGGAATTTGCTGAAG..............................................................................................................GGGGCGGATGCTGTACTAGTTCCCGGAGGATTTGGTGATAGAGGTGTGGAGGGTAAAATACTTGCTGCCAAATACGCACGTGAAAACAGGATTCCTTACCTGGGCATATGTTTAGGCATGCAAATTGCTGTTATTGAGTATGCTAGATCTATTCTTGGGTTGCAAGATGCGAACAGTACAGAGTTTGATCCCAACACTCCGAATCCTTGTGTAATTTTCATGCCGGAG...........................................................................................................GGTTCAAAAACGCATATGGGGGGTACAATGCGTCTTGGATCAAGAAGAACTTATTTTCAAGTCAGAGATTCTAAATCTACAAAATT................................................................................................................ATTTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E319918" ref_strand="+" ref_description="SGN-E319918 [cTOB-12-B24]">
      <seq>aagggggcggatgctgtactagatcccggaggatttggtgatagaggtgtggagggtaaaatacttgctgccaaatacgcacgtgaaaacaggattccttacctgggcatatgtttatgcatgcaaattgctgttattgagtatgctagatctattcttgggttgcaagatgcgaacagtacaaagtttgatcccaacactccgaatccttgtgtaattatcatgccggagggttcaaaaacgcatatggggggtacaatgcgtattggatcaagaagaacttattttcaagtcagagattctaaatctacaaaattatttggcaaccagagctatgtacatgagaggcaccgtgataaatatgaggtgaatcctgatgtggtgcagcaatttgaagatgctggcctttctttcactggcaaagatgaaactggtcgtcgcatggagattgttgagctgactaatcatccgtactttattggcgttcaatttcatcctgaatttaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="97931" stop="99482"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98230" g_stop="98460" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="231" r_length="231" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98461" i_stop="98567" i_length="107">
            <donor d_prob="0.941" d_score="0.96"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98568" g_stop="98653" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="317" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98654" i_stop="98765" i_length="112">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.921" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98766" g_stop="98814" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="366" r_length="49" r_score="0.918"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98815" i_stop="98959" i_length="145">
            <donor d_prob="0.980" d_score="0.92"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98960" g_stop="99040" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="447" r_length="81" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="99041" i_stop="99121" i_length="81">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="99122" g_stop="99182" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="508" r_length="61" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E319918" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E319918" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98230" e_stop="98460"/>
          <exon e_start="98568" e_stop="98653"/>
          <exon e_start="98766" e_stop="98814"/>
          <exon e_start="98960" e_stop="99040"/>
          <exon e_start="99122" e_stop="99182"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGGGGCGGATGCTGTACTAGTTCCCGGAGGATTTGGTGATAGAGGTGTGGAGGGTAAAATACTTGCTGCCAAATACGCACGTGAAAACAGGATTCCTTACCTGGGCATATGTTTAGGCATGCAAATTGCTGTTATTGAGTATGCTAGATCTATTCTTGGGTTGCAAGATGCGAACAGTACAGAGTTTGATCCCAACACTCCGAATCCTTGTGTAATTTTCATGCCGGAGGTTAAGTTCTGACACTTCCCGTTAATCATGAATTTTTCTCATGACTTTTATGTATTTTAGGTCTCATTTTAGTACTGTCTATATTAATCTGTAGACCATATTCACAGGGTTCAAAAACGCATATGGGGGGTACAATGCGTCTTGGATCAAGAAGAACTTATTTTCAAGTCAGAGATTCTAAATCTACAAAATTGTAAGTACTTCCTTTCCTCCAACCGCACTGCATTGGCTATATTTTGATTTGAAGCCATTCTTGGAGGGCTTCTATTGATATTACCAAGTGGCTAAACTATATCTTTTCTCAGATTTGGCAACCAGAGCTTTGTAGATGAGAGGCACCGTCATAGATATGAGGTACACCACTTTTTTTTCTTCTGTAAATTGGAACAGTGGTGTAACTATTGCACAGCTAGGTGGACTGGTTTAACTATATGTGGACTATAAGATGTGATATCTTTAGCAAGGGACGTATGCTCAAAACTTATTTTGTGCTGTGTAGGTGAATCCTGATATGGTGCAGCAATTTGAAGATGCTGGCCTTTCTTTCACTGGCAAAGATGAAACTGGTCGTCGCATGGAGGTGAACCTTTGTCTGATTGTATTACGAATTCATGCTAGATACTCGTAGTATTATTGATTTAATTTTCTATTTCTTGTACAGATTGTTGAGCTGCCTAATCATCCGTACTTTATTGGCGTTCAATTTCATCCTGAATTTAAAT</genome_strand>
        <mrna_strand>AAGGGGGCGGATGCTGTACTAGATCCCGGAGGATTTGGTGATAGAGGTGTGGAGGGTAAAATACTTGCTGCCAAATACGCACGTGAAAACAGGATTCCTTACCTGGGCATATGTTTATGCATGCAAATTGCTGTTATTGAGTATGCTAGATCTATTCTTGGGTTGCAAGATGCGAACAGTACAAAGTTTGATCCCAACACTCCGAATCCTTGTGTAATTATCATGCCGGAG...........................................................................................................GGTTCAAAAACGCATATGGGGGGTACAATGCGTATTGGATCAAGAAGAACTTATTTTCAAGTCAGAGATTCTAAATCTACAAAATT................................................................................................................ATTTGGCAACCAGAGCTATGTACATGAGAGGCACCGTGATAAATATGAG.................................................................................................................................................GTGAATCCTGATGTGGTGCAGCAATTTGAAGATGCTGGCCTTTCTTTCACTGGCAAAGATGAAACTGGTCGTCGCATGGAG.................................................................................ATTGTTGAGCTGACTAATCATCCGTACTTTATTGGCGTTCAATTTCATCCTGAATTTAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E691312" ref_strand="+" ref_description="SGN-E691312 [LH_Ea05M14]">
      <seq>ttatggtgcagcaatttgaagatgctggcctttctttcactggcaaagatgaaactggtcgtcgcatggagattgttgagctgcctaatcatccgtactttattggcgttcaatttcatcctgaatttaaatcaaggccaggaaaaccgtctgccgtgttcttagggcttatagcagcagcatgcgggcagcttgattctctcctgaagaagggtggaacaccggctcatggacttagcaatggtacagcatctggcgaaaaattgcatcgaaatggaaatggaacgactcttgccaatggatctttagatgggatttatcgcaatgggaatggtgtacatgtctaaggaaacagtaaaaacacaattggggtcaatggccttgtgatcgatctcttatcaatcaaattttgctagtgcctttcttccagtcgatatgtataggttttacagcttctctcgttaaggctatctagttatagagctaaattccggtctttgttacggagttatagcggcagcaagtttaatttaggcatttactttgaacgattaaaaaaactcttttgattacctgctccaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="98671" stop="100247"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98970" g_stop="99040" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99041" i_stop="99121" i_length="81">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="99122" g_stop="99215" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="165" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="99216" i_stop="99535" i_length="320">
            <donor d_prob="0.759" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="99536" g_stop="99949" g_length="414"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="591" r_length="426" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E691312" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E691312" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98970" e_stop="99040"/>
          <exon e_start="99122" e_stop="99215"/>
          <exon e_start="99536" e_stop="99949"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATGGTGCAGCAATTTGAAGATGCTGGCCTTTCTTTCACTGGCAAAGATGAAACTGGTCGTCGCATGGAGGTGAACCTTTGTCTGATTGTATTACGAATTCATGCTAGATACTCGTAGTATTATTGATTTAATTTTCTATTTCTTGTACAGATTGTTGAGCTGCCTAATCATCCGTACTTTATTGGCGTTCAATTTCATCCTGAATTTAAATCAAGGCCAGGAAAACCGTCTGCCGTGTTCTTAGGTATTCCTCCCTGCTTTATCCTTCCGCTCATAGCCAGCTAGAATACCTGATGCTTACTTTGGAACTTTGGAAGTATCATTTCAACATTTGTATTTGCATTTCAATATGTGGCTCGCTTCTAGTTGATCCAGAAAAGTCAATGTATACAATCTTAGATTATTTGATTTGTAGACATAAAACTAACGATTGGTACTTTGAAGGAATTAAGTGAATGAAGGTCTTTTTAACCGTGACGTCCAGCTCCTAATGGTTATGAGTAGTCTCTTGTTTTGAATGTAATGCTCTTCGTTATGATGTGTTATTCCTATTTCTCTGAACAGGGCTTATAGCAGCAGCATGCGGGCAGCTTGATTGTCTCCTGAAGAAGGGTGGAACACCGACTCATGGACTTAGCAATGGTACAGCATCTGGCGAAAAATTGCATCGAAATGGAAATGGAACGACTCTTGCCAATGGATCTTTAGATGGGATTTATCGCAATGGGAATGGTGTACATGTCTAAGGAAACAGTAAAAACACTATTGGGGTCAATGGCCTTGTGATCG-----------ATCAAATTTTGCTAGTGCCTTTCTTCCAGTCGATATGTATAGGTTTTACAGCTTCTCTCGTTAAGGCTATCTAGTTATAGAGCTAAATTCCGGTCTTTGTTACGGAGTTGTAGCGGCAGCAAGTTTAATTTAGGCATTTACTTTGAACGATT-AAAAAACTCTTTTGATTACCTGCTCCAACATGAAACT</genome_strand>
        <mrna_strand>TTATGGTGCAGCAATTTGAAGATGCTGGCCTTTCTTTCACTGGCAAAGATGAAACTGGTCGTCGCATGGAG.................................................................................ATTGTTGAGCTGCCTAATCATCCGTACTTTATTGGCGTTCAATTTCATCCTGAATTTAAATCAAGGCCAGGAAAACCGTCTGCCGTGTTCTTAG................................................................................................................................................................................................................................................................................................................................GGCTTATAGCAGCAGCATGCGGGCAGCTTGATTCTCTCCTGAAGAAGGGTGGAACACCGGCTCATGGACTTAGCAATGGTACAGCATCTGGCGAAAAATTGCATCGAAATGGAAATGGAACGACTCTTGCCAATGGATCTTTAGATGGGATTTATCGCAATGGGAATGGTGTACATGTCTAAGGAAACAGTAAAAACACAATTGGGGTCAATGGCCTTGTGATCGATCTCTTATCAATCAAATTTTGCTAGTGCCTTTCTTCCAGTCGATATGTATAGGTTTTACAGCTTCTCTCGTTAAGGCTATCTAGTTATAGAGCTAAATTCCGGTCTTTGTTACGGAGTTATAGCGGCAGCAAGTTTAATTTAGGCATTTACTTTGAACGATTAAAAAAACTCTTTTGATTACCTGCTCCAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E691311" ref_strand="+" ref_description="SGN-E691311 [LH_Ea05M13]">
      <seq>atatggtgcagcaatttgaagatgctggcctttctttcactggcaaagatgaaactggtcgtcgcatggagattgttgagctgcctaatcatccgtactttattggcgttcaatttcatcctgaatttaaatcaaggccaggaaaaccgtctgccgtgttcttagggcttatagcagcagcatgcgggcagcttgattctctcctgaagaagggtggaacaccggctcatggacttagcaatggtacagcatctggcgaaaaattgcatcgaaatggaaatggaacgactcttgccaatggatctttagatgggatttatcgcaatgggaatggtgtacatgtctaaggaaacagtaaaaacacaattggggtcaatggccttgtgatcgatctcttatcaatcaaattttgctagtgcctttcttccagtcgatatgtataggttttacagcttctctcgttaaggctatctagttatagagctaaattccggtctttgttacggagttatagcggcagcaagtttaatttaggcatttactttgaacgattaaaaaaactcttttgattacctgctccaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="98670" stop="100247"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98970" g_stop="99040" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99041" i_stop="99121" i_length="81">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="99122" g_stop="99215" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="165" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="99216" i_stop="99535" i_length="320">
            <donor d_prob="0.759" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="99536" g_stop="99949" g_length="414"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="591" r_length="426" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E691311" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E691311" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98970" e_stop="99040"/>
          <exon e_start="99122" e_stop="99215"/>
          <exon e_start="99536" e_stop="99949"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATGGTGCAGCAATTTGAAGATGCTGGCCTTTCTTTCACTGGCAAAGATGAAACTGGTCGTCGCATGGAGGTGAACCTTTGTCTGATTGTATTACGAATTCATGCTAGATACTCGTAGTATTATTGATTTAATTTTCTATTTCTTGTACAGATTGTTGAGCTGCCTAATCATCCGTACTTTATTGGCGTTCAATTTCATCCTGAATTTAAATCAAGGCCAGGAAAACCGTCTGCCGTGTTCTTAGGTATTCCTCCCTGCTTTATCCTTCCGCTCATAGCCAGCTAGAATACCTGATGCTTACTTTGGAACTTTGGAAGTATCATTTCAACATTTGTATTTGCATTTCAATATGTGGCTCGCTTCTAGTTGATCCAGAAAAGTCAATGTATACAATCTTAGATTATTTGATTTGTAGACATAAAACTAACGATTGGTACTTTGAAGGAATTAAGTGAATGAAGGTCTTTTTAACCGTGACGTCCAGCTCCTAATGGTTATGAGTAGTCTCTTGTTTTGAATGTAATGCTCTTCGTTATGATGTGTTATTCCTATTTCTCTGAACAGGGCTTATAGCAGCAGCATGCGGGCAGCTTGATTGTCTCCTGAAGAAGGGTGGAACACCGACTCATGGACTTAGCAATGGTACAGCATCTGGCGAAAAATTGCATCGAAATGGAAATGGAACGACTCTTGCCAATGGATCTTTAGATGGGATTTATCGCAATGGGAATGGTGTACATGTCTAAGGAAACAGTAAAAACACTATTGGGGTCAATGGCCTTGTGATCG-----------ATCAAATTTTGCTAGTGCCTTTCTTCCAGTCGATATGTATAGGTTTTACAGCTTCTCTCGTTAAGGCTATCTAGTTATAGAGCTAAATTCCGGTCTTTGTTACGGAGTTGTAGCGGCAGCAAGTTTAATTTAGGCATTTACTTTGAACGATT-AAAAAACTCTTTTGATTACCTGCTCCAACATGAAACT</genome_strand>
        <mrna_strand>ATATGGTGCAGCAATTTGAAGATGCTGGCCTTTCTTTCACTGGCAAAGATGAAACTGGTCGTCGCATGGAG.................................................................................ATTGTTGAGCTGCCTAATCATCCGTACTTTATTGGCGTTCAATTTCATCCTGAATTTAAATCAAGGCCAGGAAAACCGTCTGCCGTGTTCTTAG................................................................................................................................................................................................................................................................................................................................GGCTTATAGCAGCAGCATGCGGGCAGCTTGATTCTCTCCTGAAGAAGGGTGGAACACCGGCTCATGGACTTAGCAATGGTACAGCATCTGGCGAAAAATTGCATCGAAATGGAAATGGAACGACTCTTGCCAATGGATCTTTAGATGGGATTTATCGCAATGGGAATGGTGTACATGTCTAAGGAAACAGTAAAAACACAATTGGGGTCAATGGCCTTGTGATCGATCTCTTATCAATCAAATTTTGCTAGTGCCTTTCTTCCAGTCGATATGTATAGGTTTTACAGCTTCTCTCGTTAAGGCTATCTAGTTATAGAGCTAAATTCCGGTCTTTGTTACGGAGTTATAGCGGCAGCAAGTTTAATTTAGGCATTTACTTTGAACGATTAAAAAAACTCTTTTGATTACCTGCTCCAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E695151" ref_strand="+" ref_description="SGN-E695151 [LH_Ea05M13](-)">
      <seq>atatggtgcagcaatttgaagatgctggcctttctttcactggcaaagatgaaactggtcgtcgcatggagattgttgagctgcctaatcatccgtactttattggcgttcaatttcatcctgaatttaaatcaaggccaggaaaaccgtctgccgtgttcttagggcttatagcagcagcatgcgggcagcttgattctctcctgaagaagggtggaacaccggctcatggacttagcaatggtacagcatctggcgaaaaattgcatcgaaatggaaatggaacgactcttgccaatggatctttagatgggatttatcgcaatgggaatggtgtacatgtctaaggaaacagtaaaaacacaattggggtcaatggccttgtgatcgatctcttatcaatcaaattttgctagtgcctttcttccagtcgatatgtataggttttacagcttctctcgttaaggctatctagttatagagctaaattccggtctttgtttcaaaggtatagcggcagcaagtttaatttaggcatttccttagaggattaaaaaaactcttttgttacctgctccaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="98670" stop="100206"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98970" g_stop="99040" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99041" i_stop="99121" i_length="81">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="99122" g_stop="99215" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="165" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="99216" i_stop="99535" i_length="320">
            <donor d_prob="0.759" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="99536" g_stop="99941" g_length="406"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="581" r_length="416" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="582" polyA_stop="594"/>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E695151" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>571</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E695151" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98970" e_stop="99040"/>
          <exon e_start="99122" e_stop="99215"/>
          <exon e_start="99536" e_stop="99941"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATGGTGCAGCAATTTGAAGATGCTGGCCTTTCTTTCACTGGCAAAGATGAAACTGGTCGTCGCATGGAGGTGAACCTTTGTCTGATTGTATTACGAATTCATGCTAGATACTCGTAGTATTATTGATTTAATTTTCTATTTCTTGTACAGATTGTTGAGCTGCCTAATCATCCGTACTTTATTGGCGTTCAATTTCATCCTGAATTTAAATCAAGGCCAGGAAAACCGTCTGCCGTGTTCTTAGGTATTCCTCCCTGCTTTATCCTTCCGCTCATAGCCAGCTAGAATACCTGATGCTTACTTTGGAACTTTGGAAGTATCATTTCAACATTTGTATTTGCATTTCAATATGTGGCTCGCTTCTAGTTGATCCAGAAAAGTCAATGTATACAATCTTAGATTATTTGATTTGTAGACATAAAACTAACGATTGGTACTTTGAAGGAATTAAGTGAATGAAGGTCTTTTTAACCGTGACGTCCAGCTCCTAATGGTTATGAGTAGTCTCTTGTTTTGAATGTAATGCTCTTCGTTATGATGTGTTATTCCTATTTCTCTGAACAGGGCTTATAGCAGCAGCATGCGGGCAGCTTGATTGTCTCCTGAAGAAGGGTGGAACACCGACTCATGGACTTAGCAATGGTACAGCATCTGGCGAAAAATTGCATCGAAATGGAAATGGAACGACTCTTGCCAATGGATCTTTAGATGGGATTTATCGCAATGGGAATGGTGTACATGTCTAAGGAAACAGTAAAAACACTATTGGGGTCAATGGCCTTGTGATCG-----------ATCAAATTTTGCTAGTGCCTTTCTTCCAGTCGATATGTATAGGTTTTACAGCTTCTCTCGTTAAGGCTATCTAGTTATAGAGCTAAATTCCGGTCTTTGTTACGGAGTTGTAGCGGCAGCAAGTTTAATTTAGGCATTTACTTTGAACGATTAAAAAACTCTTTTGATTACCTGCTCCAAC</genome_strand>
        <mrna_strand>ATATGGTGCAGCAATTTGAAGATGCTGGCCTTTCTTTCACTGGCAAAGATGAAACTGGTCGTCGCATGGAG.................................................................................ATTGTTGAGCTGCCTAATCATCCGTACTTTATTGGCGTTCAATTTCATCCTGAATTTAAATCAAGGCCAGGAAAACCGTCTGCCGTGTTCTTAG................................................................................................................................................................................................................................................................................................................................GGCTTATAGCAGCAGCATGCGGGCAGCTTGATTCTCTCCTGAAGAAGGGTGGAACACCGGCTCATGGACTTAGCAATGGTACAGCATCTGGCGAAAAATTGCATCGAAATGGAAATGGAACGACTCTTGCCAATGGATCTTTAGATGGGATTTATCGCAATGGGAATGGTGTACATGTCTAAGGAAACAGTAAAAACACAATTGGGGTCAATGGCCTTGTGATCGATCTCTTATCAATCAAATTTTGCTAGTGCCTTTCTTCCAGTCGATATGTATAGGTTTTACAGCTTCTCTCGTTAAGGCTATCTAGTTATAGAGCTAAATTCCGGTCTTTGTTTCAAAGGTATAGCGGCAGCAAGTTTAATTTAGGCATTTCCTTAGAGGATTAAAAAAACTCTTTTG-TTACCTGCTCCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E359082" ref_strand="-" ref_description="SGN-E359082 [cLHT-11-L17]">
      <seq>ctttattggcgttcaatttcatcctgaatttaaatcaaggccaggaaaaccgtctgccgtgttcttagggcttatagcagcagcatgcgggcatcttgattctctcctgaagaagggtggaacaccgactcatggacttagcaatggtacagcatctggcgaaaaattgcatcgaaatggaaatggaacgactcttgccaatggatctttagatgggatttatcgcaatgggaatggtgtacatgtctaaggaaacagtaaaaacccaattggggtcaatggccttgtgatcgatctcttatcaatcaaattttgctagtgcctttcttccagtcgatatgtataggttttacagcttctctcgttaaggctatctagttatagagctaaattccggtctttgttacggagttatagcggcagcaagtttaatttaggcatttactttgaacgattaaaaaaactcttttgattacctgctccaacatgaaaaacttgtgtttggtagtaaaagattgggttgctcctaaaaaaaaaaaaaaaaaaaaaaaaaaaaactcgaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="98848" stop="100283"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99148" g_stop="99215" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99216" i_stop="99535" i_length="320">
            <donor d_prob="0.759" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="99536" g_stop="99982" g_length="447"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="529" r_length="461" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="530" polyA_stop="558"/>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E359082" ref_strand="-">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="0.913" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E359082" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="99148" e_stop="99215"/>
          <exon e_start="99536" e_stop="99982"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTATTGGCGTTCAATTTCATCCTGAATTTAAATCAAGGCCAGGAAAACCGTCTGCCGTGTTCTTAGGTATTCCTCCCTGCTTTATCCTTCCGCTCATAGCCAGCTAGAATACCTGATGCTTACTTTGGAACTTTGGAAGTATCATTTCAACATTTGTATTTGCATTTCAATATGTGGCTCGCTTCTAGTTGATCCAGAAAAGTCAATGTATACAATCTTAGATTATTTGATTTGTAGACATAAAACTAACGATTGGTACTTTGAAGGAATTAAGTGAATGAAGGTCTTTTTAACCGTGACGTCCAGCTCCTAATGGTTATGAGTAGTCTCTTGTTTTGAATGTAATGCTCTTCGTTATGATGTGTTATTCCTATTTCTCTGAACAGGGCTTATAGCAGCAGCATGCGGGCAGCTTGATTGTCTCCTGAAGAAGGGTGGAACACCGACTCATGGACTTAGCAATGGTACAGCATCTGGCGAAAAATTGCATCGAAATGGAAATGGAACGACTCTTGCCAATGGATCTTTAGATGGGATTTATCGCAATGGGAATGGTGTACATGTCTAAGGAAACAGTAAAAACACTATTGGGGTCAATGGCCTTGTGATCG-----------ATCAAATTTTGCTAGTGCCTTTCTTCCAGTCGATATGTATAGGTTTTACAGCTTCTCTCGTTAAGGCTATCTAGTTATAGAGCTAAATTCCGGTCTTTGTTACGGAGTTGTAGCGGCAGCAAGTTTAATTTAGGCATTTACTTTGAACGATT-AAAAAACTCTTTTGATTACCTGCTCCAACATG--AAACTTGTGTTTGGTAGTAAAAGATTGGATTGCTCCTA</genome_strand>
        <mrna_strand>CTTTATTGGCGTTCAATTTCATCCTGAATTTAAATCAAGGCCAGGAAAACCGTCTGCCGTGTTCTTAG................................................................................................................................................................................................................................................................................................................................GGCTTATAGCAGCAGCATGCGGGCATCTTGATTCTCTCCTGAAGAAGGGTGGAACACCGACTCATGGACTTAGCAATGGTACAGCATCTGGCGAAAAATTGCATCGAAATGGAAATGGAACGACTCTTGCCAATGGATCTTTAGATGGGATTTATCGCAATGGGAATGGTGTACATGTCTAAGGAAACAGTAAAAACCCAATTGGGGTCAATGGCCTTGTGATCGATCTCTTATCAATCAAATTTTGCTAGTGCCTTTCTTCCAGTCGATATGTATAGGTTTTACAGCTTCTCTCGTTAAGGCTATCTAGTTATAGAGCTAAATTCCGGTCTTTGTTACGGAGTTATAGCGGCAGCAAGTTTAATTTAGGCATTTACTTTGAACGATTAAAAAAACTCTTTTGATTACCTGCTCCAACATGAAAAACTTGTGTTTGGTAGTAAAAGATTGGGTTGCTCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E226124" ref_strand="+" ref_description="SGN-E226124 [cLEL-31-G3](-)">
      <seq>tgttcttagggcttatagcagcagcatgcgggcagcttgattgtctcctgaagaagggtggaacacccgactcatggacttagcaatggtacagcatctggcgaaaaattgcatcgaaatggaaatggaacgactcttgccaatggatctttagatgggatttatcgcaatgggaatggtgtacatgtctaaggaaacagtaaaaacactattggggtcaatggccttgtgatcgatcaaattttgctagtgcctttcttccagtcgatatgtataggttttacagcttctctcgttaaggctatctagttatagagctaaattccggtctttgttacggagttgtagcggcagcaagtttaatttaggcatttactttgaacgattaaaaaactcttttgattacctgctccaacatgaaacttgtgtttggtagtaaaagattggattgctcctaattcgatctttataaagatcttgagatggcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="99234" stop="100313"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99536" g_stop="100010" g_length="475"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="485" r_length="476" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E226124" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>475</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E226124" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99536" e_stop="100010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTTATAGCAGCAGCATGCGGGCAGCTTGATTGTCTCCTGAAGAAGGGTGGAACA-CCGACTCATGGACTTAGCAATGGTACAGCATCTGGCGAAAAATTGCATCGAAATGGAAATGGAACGACTCTTGCCAATGGATCTTTAGATGGGATTTATCGCAATGGGAATGGTGTACATGTCTAAGGAAACAGTAAAAACACTATTGGGGTCAATGGCCTTGTGATCGATCAAATTTTGCTAGTGCCTTTCTTCCAGTCGATATGTATAGGTTTTACAGCTTCTCTCGTTAAGGCTATCTAGTTATAGAGCTAAATTCCGGTCTTTGTTACGGAGTTGTAGCGGCAGCAAGTTTAATTTAGGCATTTACTTTGAACGATTAAAAAACTCTTTTGATTACCTGCTCCAACATGAAACTTGTGTTTGGTAGTAAAAGATTGGATTGCTCCTAATTCGATCTTTATGAAGTTCTTGAGATG</genome_strand>
        <mrna_strand>GGCTTATAGCAGCAGCATGCGGGCAGCTTGATTGTCTCCTGAAGAAGGGTGGAACACCCGACTCATGGACTTAGCAATGGTACAGCATCTGGCGAAAAATTGCATCGAAATGGAAATGGAACGACTCTTGCCAATGGATCTTTAGATGGGATTTATCGCAATGGGAATGGTGTACATGTCTAAGGAAACAGTAAAAACACTATTGGGGTCAATGGCCTTGTGATCGATCAAATTTTGCTAGTGCCTTTCTTCCAGTCGATATGTATAGGTTTTACAGCTTCTCTCGTTAAGGCTATCTAGTTATAGAGCTAAATTCCGGTCTTTGTTACGGAGTTGTAGCGGCAGCAAGTTTAATTTAGGCATTTACTTTGAACGATTAAAAAACTCTTTTGATTACCTGCTCCAACATGAAACTTGTGTTTGGTAGTAAAAGATTGGATTGCTCCTAATTCGATCTTTATAAAGATCTTGAGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E226028" ref_strand="+" ref_description="SGN-E226028 [cLEL-31-G3](-)">
      <seq>aatggtacagcatctggcgaaaaattgcatcgaaatggaaatggaacgactcttgccaatggatctttagatgggatttatcgcaatgggaatggtgtacatgtctaaggaaacagtaaaaacactattggggtcaatggccttgtgatcgatcaaattttgctagtgcctttcttccagtcgatatgtataggttttacagcttctctcgttaaggctatctagttatagagctaaattccggtctttgttacggagttgtagcggcagcaagtttaatttaggcatttactttgaacgattaaaaaactcttttgattacctgctccaacatgaaacttgtgtttggtagtaaaagattggattgctcctaattcgatctttatgaagttcttgagatggcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="99310" stop="100313"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99610" g_stop="100010" g_length="401"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="401" r_length="401" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E226028" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>401</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E226028" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99610" e_stop="100010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGGTACAGCATCTGGCGAAAAATTGCATCGAAATGGAAATGGAACGACTCTTGCCAATGGATCTTTAGATGGGATTTATCGCAATGGGAATGGTGTACATGTCTAAGGAAACAGTAAAAACACTATTGGGGTCAATGGCCTTGTGATCGATCAAATTTTGCTAGTGCCTTTCTTCCAGTCGATATGTATAGGTTTTACAGCTTCTCTCGTTAAGGCTATCTAGTTATAGAGCTAAATTCCGGTCTTTGTTACGGAGTTGTAGCGGCAGCAAGTTTAATTTAGGCATTTACTTTGAACGATTAAAAAACTCTTTTGATTACCTGCTCCAACATGAAACTTGTGTTTGGTAGTAAAAGATTGGATTGCTCCTAATTCGATCTTTATGAAGTTCTTGAGATG</genome_strand>
        <mrna_strand>AATGGTACAGCATCTGGCGAAAAATTGCATCGAAATGGAAATGGAACGACTCTTGCCAATGGATCTTTAGATGGGATTTATCGCAATGGGAATGGTGTACATGTCTAAGGAAACAGTAAAAACACTATTGGGGTCAATGGCCTTGTGATCGATCAAATTTTGCTAGTGCCTTTCTTCCAGTCGATATGTATAGGTTTTACAGCTTCTCTCGTTAAGGCTATCTAGTTATAGAGCTAAATTCCGGTCTTTGTTACGGAGTTGTAGCGGCAGCAAGTTTAATTTAGGCATTTACTTTGAACGATTAAAAAACTCTTTTGATTACCTGCTCCAACATGAAACTTGTGTTTGGTAGTAAAAGATTGGATTGCTCCTAATTCGATCTTTATGAAGTTCTTGAGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E221062" ref_strand="+" ref_description="SGN-E221062 [cLEL-22-N24](-)">
      <seq>aattgcatcgaaatggaaatggaacgnctcttgccaatgggtctttagatgggatttatcgcaatgggaatggtgtacatgtctaaggaaacagtaaaaacactattggggtcaatggccttgtgatcgatcaaattttgctagtgcctttcttccagtcgatatgtataggttttacagcttctctcgttaaggctatctagttatagagctaaattccggtctttgttacggagttgtagcggcagcaagtttaatttaggcattttctttgaacgattaaaaaactcttttgattacctgctccaacatgaaacttgtgtttggtagtaaaagattggattgctcctaattcgatctttatgaagttcttgagatggcatctctatccactttaagtttttgttgnnnnnaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="99332" stop="100339"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99632" g_stop="100041" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="410" r_length="410" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="414" polyA_stop="434"/>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E221062" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>410</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E221062" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99632" e_stop="100041"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGCATCGAAATGGAAATGGAACGACTCTTGCCAATGGATCTTTAGATGGGATTTATCGCAATGGGAATGGTGTACATGTCTAAGGAAACAGTAAAAACACTATTGGGGTCAATGGCCTTGTGATCGATCAAATTTTGCTAGTGCCTTTCTTCCAGTCGATATGTATAGGTTTTACAGCTTCTCTCGTTAAGGCTATCTAGTTATAGAGCTAAATTCCGGTCTTTGTTACGGAGTTGTAGCGGCAGCAAGTTTAATTTAGGCATTTACTTTGAACGATTAAAAAACTCTTTTGATTACCTGCTCCAACATGAAACTTGTGTTTGGTAGTAAAAGATTGGATTGCTCCTAATTCGATCTTTATGAAGTTCTTGAGATGGCATCTCTATCCACTTTAAGTTTTTGTTGAT</genome_strand>
        <mrna_strand>AATTGCATCGAAATGGAAATGGAACGNCTCTTGCCAATGGGTCTTTAGATGGGATTTATCGCAATGGGAATGGTGTACATGTCTAAGGAAACAGTAAAAACACTATTGGGGTCAATGGCCTTGTGATCGATCAAATTTTGCTAGTGCCTTTCTTCCAGTCGATATGTATAGGTTTTACAGCTTCTCTCGTTAAGGCTATCTAGTTATAGAGCTAAATTCCGGTCTTTGTTACGGAGTTGTAGCGGCAGCAAGTTTAATTTAGGCATTTTCTTTGAACGATTAAAAAACTCTTTTGATTACCTGCTCCAACATGAAACTTGTGTTTGGTAGTAAAAGATTGGATTGCTCCTAATTCGATCTTTATGAAGTTCTTGAGATGGCATCTCTATCCACTTTAAGTTTTTGTTGNN</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E221214" ref_strand="+" ref_description="SGN-E221214 [cLEL-22-N12](-)">
      <seq>gatctttaaatgggatttatcgcaatgggaatggtgtacatgtctaaggaacaagtaaaaaccctattggggtcaatggccttgtgatcgatcaaattttgctagtgcctttcttccagtcgatatgtataggttttacagcttctctcgttaaggctatctagttataaagctaaattccggtctttgttacggagttgtagcggcagcaagtttaatttaggcatttactttgaacgattaaaaaactcttttgattacctgctccaacatgaaacttgtgtttggtagtaaaagattggattgctcctaattcgatctttatgaagttcttgagatggcatctctatcccccttaagtttttgttgaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="99371" stop="100340"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99671" g_stop="100039" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="369" r_length="369" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="370" polyA_stop="395"/>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E221214" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>369</cumulative_length_of_scored_exons>
        <coverage percentage="0.934" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E221214" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99671" e_stop="100039"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTTTAGATGGGATTTATCGCAATGGGAATGGTGTACATGTCTAAGGAAACAGTAAAAACACTATTGGGGTCAATGGCCTTGTGATCGATCAAATTTTGCTAGTGCCTTTCTTCCAGTCGATATGTATAGGTTTTACAGCTTCTCTCGTTAAGGCTATCTAGTTATAGAGCTAAATTCCGGTCTTTGTTACGGAGTTGTAGCGGCAGCAAGTTTAATTTAGGCATTTACTTTGAACGATTAAAAAACTCTTTTGATTACCTGCTCCAACATGAAACTTGTGTTTGGTAGTAAAAGATTGGATTGCTCCTAATTCGATCTTTATGAAGTTCTTGAGATGGCATCTCTATCCACTTTAAGTTTTTGTTG</genome_strand>
        <mrna_strand>GATCTTTAAATGGGATTTATCGCAATGGGAATGGTGTACATGTCTAAGGAACAAGTAAAAACCCTATTGGGGTCAATGGCCTTGTGATCGATCAAATTTTGCTAGTGCCTTTCTTCCAGTCGATATGTATAGGTTTTACAGCTTCTCTCGTTAAGGCTATCTAGTTATAAAGCTAAATTCCGGTCTTTGTTACGGAGTTGTAGCGGCAGCAAGTTTAATTTAGGCATTTACTTTGAACGATTAAAAAACTCTTTTGATTACCTGCTCCAACATGAAACTTGTGTTTGGTAGTAAAAGATTGGATTGCTCCTAATTCGATCTTTATGAAGTTCTTGAGATGGCATCTCTATCCCCCTTAAGTTTTTGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E316464" ref_strand="+" ref_description="SGN-E316464 [cTOA-25-A1]">
      <seq>tgattcgtgtgaaagaagacttcacaggaaagtgaggatgtcgctcggaatttcgcttcaatggcaactcccctccgttatcaggagtactacaacctcggcagctcaacgtacgaccgatgtctttctgtcgtttcctacggttcattccggtcgtgctcttcagagctcggccattcccagtagctcaattgctaccggcaaacgggatggacggttaagatcccttcgttgtctatctgctctggatcctaacttgaagtctacgctggataaggttgtcacatcacaaaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggattgaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgttgtagaagcatacaagagcggagagttgcaagaattgctagaaaggacattgtgctcctgatggattcagatgtaataagcccattattaaattgtatggactatcangtgtctgttgttcttactgcagatgatngaaatattttactatgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="100069" stop="104438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100369" g_stop="100610" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="242" r_length="242" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101697" g_stop="101966" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="512" r_length="270" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103990" g_stop="104138" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="513" r_stop="661" r_length="149" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E316464" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E316464" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100369" e_stop="100610"/>
          <exon e_start="101697" e_stop="101966"/>
          <exon e_start="103990" e_stop="104138"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTCGTGTGAAAGAAGACTTCACAGGAAAGTGAGGATGTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTGGTAAAATTTAATTTCGCATCATCATATATTCCAACTTATAGGGTTTTCAATCGTTCTGTGCTTATTTCTTCCACTGCAATTATTTTAGTACTACTTTCTCTGATTGAAGGACGGAGAAATCTAAACTTTTTTATGGTGTTGGACGTAATTGCTTTCTGCTACGTTAATTAGTTGTATATTAATGCATTTTCTGTTAGTAGTAAGTTATACTATCAGTTTATTGTCATGTCTAAATTATGTTTCTTAAGCAGAATTCGGGGTTGTTTCATTTGACGAAAAAGTGAATCTTTAGATTCAAATTTAGCTGTCTATGATGTAATTCTTATCCTTATTGCAAATTGCAAACAGAGTAAATAGCTGAGTAAGTAAGTTACCCATTATTTTAAGCATCTATCATAGTAGGCCAAGATCCCAAGTAGAAATACTTGGCCAGTTAGACTTAAGTTCTTACCAGTCCTCTATGGGGAGCTTAGTCTCCTAGGTGGAGAGAAAGTTTAAAGTTTTGTGCAAGGTATGTTAGATATGAATAAGTTTGTTGATAGTCTATTTGGTGGTAGAAGCTCACTTAGAATGAAAGACCCTTAATTGCTAGCCGGAGCAATTAATGAGGCAAGACTTAGAGGGAAAAGATCGTATTTGAGGATATTGCAAGTCTATTATGTTGGCATTCTTTGTCGTTACTTAGAAAAGTTGTGATGGCAAGGATGGACTTGTTGAAATAGAAATCTTTGGTAAATTACATCCTATCAATCAGGCTTTTGAAGAATGGATGTTTGCTTGATGGTTTTAAGTAAAGGATACATATAACTGTACTATCTATCAATTTATGCCTACAAAAGAGTGTCAGAGAAATCTTCCCCCAACCTTATGGCTACTCCAGGTTGTGTGCATCTATGTTCTTGTGATGTTATGTTATACAGGGCGTCCTTTTGCTCATTTTGTGTTTATTTATCATTGCATATTTATATATTTCTCTTATTATGCTTGGAATGTACAACTTATGTTTTCATTTAAGAATAGCCGAGGTAGTAAGTCACTCATCTAAGAATTGCTGACATGTGTTTTATTCACTTTCATGTCTTGTAGCTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAGGTAGGTATACAAATTGATACTTCAATATGCATCAGAACTTTTGAATTATTTGCACCCCTCGACTCTTTATGTGTACCTGCTACCTCCCACCAACACAGTTACAAGTAACTTTGCCCATCAAAGTTGAGGTAGATGGGAAGAGATCATCTAGTGTCTTTTGTGTTTGCCTGGATTCTAATCTTGGTCCCTAAGAACAGTTTTTTGTGTTTTTAGGTTATGTTACCAAACTGGAAGGTGTAGTACATGGTTTATACTTCCTTAGTTGTTTACTATGTTGATGAACTACTGTCAAGTTGAAGTTTTGTTCTTAATATGGTGAATCATCATAACTCTTGAAATTGGGGATTGAGCACTTTGTTGCTGAGAAGAACTGGTATAACTACCATAAATAACTTGGACAGAATGTAGAATTCTCTGTACTCAGTAGTCAATTCAACCTCCTACACCACATAGTTCACCTTGTCGATCATATCTTCTCTTCCCCAAACACGCAACTGCTAAGCTGATCCTTTTTTCCATTCGTTCACATCCTTTGAAGTCTTTAACTGGTTTTTTTAATACCAAGAAATCTGTCTGGATCCTGCCCTTTGGACCAACTGCGGCCTTTGAAAAATGGGGATAGTGGGCCAACCTTAAAATGGCTTCTCTTTTCAATTTTTTTTTAAAAATGTGATGGGTAAGAAAATCTTTGCTACCTCTTGAGTCTTGCATCTAGATTGCTAACCCTATTGTACTTTTATCAAATTGCTCTCTTATTGCCAAGTTCCTCAATGTAAGGTCCCTAATTAGTAATATCTATAAGTTGACTCTATATGAGAACACAACAAAGGGATTGTATCCCAAATGTTCCCTAACTGCCTTTCTAATTAGGAAGGTTTTCCATATGGATGGGCATTCAAGAATTGTCTAGATATGACCTGATTCATTGCAGACATCCAAAGAAAACATATTCTAGATATCTTTGGCTGCCTCATAGTGTAGAAAAAGCTGTTTACTGATTTTGCTCATGGAATGCACATGTAGTTGCCGCTGCTCCACATATTCGCCCTTTTGTTGTTTGATAATCTTGAGTTATTACAAGTTCCATACTATTGTCCACCCAAAGAAGGCTACTTTTATGGCAGATTTTGTCTTCCGGATGAACTTCCACGGAGGTTCAACATTTACCGTCCTGCCTCAATAGTGTACACCGATTAAATGGAAAAGGATTTCACTGGGAAAGACTACCTTTTCCTTCTGTCAAGATCAGTCTGTTAGGTTCCGAGTTTATGACTTAGATCAGTGACAAGTAAAAGTGAAAATCTATTTTTGGAATAGTGGACAAGTAATAGTGAAAATCTATTTTGGAATAGTGGACAAATAATAGTGAACAGAGTACTTTTTTTTATTTTTACATAGTTACATTGAGTTCACACCTTCCAGTTATAGTTATCCTCGTTGAAAATGTAAATGACTTTGTTTGGCACTTGTTGCTAGATAGTAGATTGTTACTCCTTGGATCAAATGATCAGTTCACACGGGTTTAAGCTACTCGTAGAAAAGTTAATAGAAAAAATATGTATCATGAACAAGACTTTATATTTTACACCATCTGTTTCAATGTATGTGAAACTCTTTCCATTTTGGGGATATTCTAAAATGTTTGACATGCTTCCTCCTATATTATTACTTTATACATCTTTTGTGAATCTTAATTCATTTAACTATTCAAATCTTAAACTTTGATGTGATCCATACTAAAATTTCAAACACAATTACTGTTATTATACCTAAGTTAAAGCAACATCCTGAACTCCGTATCTAGTACTGTCTATTCAAGCTTGCAACCAGATGCTAGACAAGACATGAACTTCACACCTCTTGCTGTGTCTAGATTAAGTTTTTTGGAATTTACTTCAGCCTTCATCTCTTCATCTCGAAGACAATTTTGAGCACTGAATGCAATTGCTGTCATCATGGTTCGTGCCAAGTTTTGATTCATACTGAATGGAGACTAACAAGTTGCATTGTTTTATTATTACAGAAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTT</genome_strand>
        <mrna_strand>TGATTCGTGTGAAAGAAGACTTCACAGGAAAGTGAGGATGTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCANGTGTCTGTTGTTCTTACTGCAGATGATNGAAATATTTTACTATGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E712253" ref_strand="+" ref_description="SGN-E712253 [FB04BD04]">
      <seq>aagaagacttcacaggaaagtgaggatgtcgctcggaatttcgcttcaatggcaactcccctccgttatcaggagtactacaacctcggcagctcaacgtacgaccgatgtctttctgtcgtttcctacggttcattccggtcgtgctcttcagagctcggccattcccagtagctcaattgctaccggcaaacgggatggacggttaagatcccttcgttgtctatctgctctggatcctaacttgaagtctacgctggataaggttgtcacatcacaaaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggattgaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgttgtagaagcatacaagagcggagagttgcaagaattgctagaaaggacattgtgctcctgatggattcagatgtaataagcccattattaaattgtatggactatcaggtgtctgttgttcttactgcagatgatgaaaatattttactatgtttatttcctcttcaaggactgaactttaagatatgaatacatcttggaanaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="100081" stop="104488"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100381" g_stop="100610" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="230" r_length="230" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101697" g_stop="101966" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="500" r_length="270" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103990" g_stop="104189" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="501" r_stop="700" r_length="200" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104190" i_stop="104277" i_length="88">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.712" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104278" g_stop="104290" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="701" r_stop="713" r_length="13" r_score="0.615"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E712253" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E712253" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100381" e_stop="100610"/>
          <exon e_start="101697" e_stop="101966"/>
          <exon e_start="103990" e_stop="104189"/>
          <exon e_start="104278" e_stop="104290"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAGACTTCACAGGAAAGTGAGGATGTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTGGTAAAATTTAATTTCGCATCATCATATATTCCAACTTATAGGGTTTTCAATCGTTCTGTGCTTATTTCTTCCACTGCAATTATTTTAGTACTACTTTCTCTGATTGAAGGACGGAGAAATCTAAACTTTTTTATGGTGTTGGACGTAATTGCTTTCTGCTACGTTAATTAGTTGTATATTAATGCATTTTCTGTTAGTAGTAAGTTATACTATCAGTTTATTGTCATGTCTAAATTATGTTTCTTAAGCAGAATTCGGGGTTGTTTCATTTGACGAAAAAGTGAATCTTTAGATTCAAATTTAGCTGTCTATGATGTAATTCTTATCCTTATTGCAAATTGCAAACAGAGTAAATAGCTGAGTAAGTAAGTTACCCATTATTTTAAGCATCTATCATAGTAGGCCAAGATCCCAAGTAGAAATACTTGGCCAGTTAGACTTAAGTTCTTACCAGTCCTCTATGGGGAGCTTAGTCTCCTAGGTGGAGAGAAAGTTTAAAGTTTTGTGCAAGGTATGTTAGATATGAATAAGTTTGTTGATAGTCTATTTGGTGGTAGAAGCTCACTTAGAATGAAAGACCCTTAATTGCTAGCCGGAGCAATTAATGAGGCAAGACTTAGAGGGAAAAGATCGTATTTGAGGATATTGCAAGTCTATTATGTTGGCATTCTTTGTCGTTACTTAGAAAAGTTGTGATGGCAAGGATGGACTTGTTGAAATAGAAATCTTTGGTAAATTACATCCTATCAATCAGGCTTTTGAAGAATGGATGTTTGCTTGATGGTTTTAAGTAAAGGATACATATAACTGTACTATCTATCAATTTATGCCTACAAAAGAGTGTCAGAGAAATCTTCCCCCAACCTTATGGCTACTCCAGGTTGTGTGCATCTATGTTCTTGTGATGTTATGTTATACAGGGCGTCCTTTTGCTCATTTTGTGTTTATTTATCATTGCATATTTATATATTTCTCTTATTATGCTTGGAATGTACAACTTATGTTTTCATTTAAGAATAGCCGAGGTAGTAAGTCACTCATCTAAGAATTGCTGACATGTGTTTTATTCACTTTCATGTCTTGTAGCTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAGGTAGGTATACAAATTGATACTTCAATATGCATCAGAACTTTTGAATTATTTGCACCCCTCGACTCTTTATGTGTACCTGCTACCTCCCACCAACACAGTTACAAGTAACTTTGCCCATCAAAGTTGAGGTAGATGGGAAGAGATCATCTAGTGTCTTTTGTGTTTGCCTGGATTCTAATCTTGGTCCCTAAGAACAGTTTTTTGTGTTTTTAGGTTATGTTACCAAACTGGAAGGTGTAGTACATGGTTTATACTTCCTTAGTTGTTTACTATGTTGATGAACTACTGTCAAGTTGAAGTTTTGTTCTTAATATGGTGAATCATCATAACTCTTGAAATTGGGGATTGAGCACTTTGTTGCTGAGAAGAACTGGTATAACTACCATAAATAACTTGGACAGAATGTAGAATTCTCTGTACTCAGTAGTCAATTCAACCTCCTACACCACATAGTTCACCTTGTCGATCATATCTTCTCTTCCCCAAACACGCAACTGCTAAGCTGATCCTTTTTTCCATTCGTTCACATCCTTTGAAGTCTTTAACTGGTTTTTTTAATACCAAGAAATCTGTCTGGATCCTGCCCTTTGGACCAACTGCGGCCTTTGAAAAATGGGGATAGTGGGCCAACCTTAAAATGGCTTCTCTTTTCAATTTTTTTTTAAAAATGTGATGGGTAAGAAAATCTTTGCTACCTCTTGAGTCTTGCATCTAGATTGCTAACCCTATTGTACTTTTATCAAATTGCTCTCTTATTGCCAAGTTCCTCAATGTAAGGTCCCTAATTAGTAATATCTATAAGTTGACTCTATATGAGAACACAACAAAGGGATTGTATCCCAAATGTTCCCTAACTGCCTTTCTAATTAGGAAGGTTTTCCATATGGATGGGCATTCAAGAATTGTCTAGATATGACCTGATTCATTGCAGACATCCAAAGAAAACATATTCTAGATATCTTTGGCTGCCTCATAGTGTAGAAAAAGCTGTTTACTGATTTTGCTCATGGAATGCACATGTAGTTGCCGCTGCTCCACATATTCGCCCTTTTGTTGTTTGATAATCTTGAGTTATTACAAGTTCCATACTATTGTCCACCCAAAGAAGGCTACTTTTATGGCAGATTTTGTCTTCCGGATGAACTTCCACGGAGGTTCAACATTTACCGTCCTGCCTCAATAGTGTACACCGATTAAATGGAAAAGGATTTCACTGGGAAAGACTACCTTTTCCTTCTGTCAAGATCAGTCTGTTAGGTTCCGAGTTTATGACTTAGATCAGTGACAAGTAAAAGTGAAAATCTATTTTTGGAATAGTGGACAAGTAATAGTGAAAATCTATTTTGGAATAGTGGACAAATAATAGTGAACAGAGTACTTTTTTTTATTTTTACATAGTTACATTGAGTTCACACCTTCCAGTTATAGTTATCCTCGTTGAAAATGTAAATGACTTTGTTTGGCACTTGTTGCTAGATAGTAGATTGTTACTCCTTGGATCAAATGATCAGTTCACACGGGTTTAAGCTACTCGTAGAAAAGTTAATAGAAAAAATATGTATCATGAACAAGACTTTATATTTTACACCATCTGTTTCAATGTATGTGAAACTCTTTCCATTTTGGGGATATTCTAAAATGTTTGACATGCTTCCTCCTATATTATTACTTTATACATCTTTTGTGAATCTTAATTCATTTAACTATTCAAATCTTAAACTTTGATGTGATCCATACTAAAATTTCAAACACAATTACTGTTATTATACCTAAGTTAAAGCAACATCCTGAACTCCGTATCTAGTACTGTCTATTCAAGCTTGCAACCAGATGCTAGACAAGACATGAACTTCACACCTCTTGCTGTGTCTAGATTAAGTTTTTTGGAATTTACTTCAGCCTTCATCTCTTCATCTCGAAGACAATTTTGAGCACTGAATGCAATTGCTGTCATCATGGTTCGTGCCAAGTTTTGATTCATACTGAATGGAGACTAACAAGTTGCATTGTTTTATTATTACAGAAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAGATGTGGTTTTCAATTGCATCTACTTAGTAATCATTGCAGAGTGTGCAGGAGAGGCGTAGTATGTGATACTTTTAGGGCATAATTTGACAGGTAAAAAATGGAA</genome_strand>
        <mrna_strand>AAGAAGACTTCACAGGAAAGTGAGGATGTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAANAA........................................................................................AAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E723894" ref_strand="+" ref_description="SGN-E723894 [FC22BD12]">
      <seq>gggcgattggcggccaatcggccgaattgacaggaaagtgagcctttcactcggaatttcgcttcaatggcaactcccctccgttatcaggagtactacaacctcggcagctcaacgtacgaccgatgtctttctgtcgtttcctacggttcattccggtcgtgctcttcaaagctcggccattcccagtagctcaattgctaccggcaaacgggatggacggttaagatcccttcgttgtctatctgctctggatcctaacttgaagtctacgctggataaggttgtcacatcacaaaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggattgaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgttgtagaagcatacaagagcggagagttgcaagaattgctagaaaggacattgtgctcctgatggattcagatgtaataagcccattattaaattgtatggactatcaggtgtctgttgttcttactgcagatgatgaaaatattttactatgtttatttcctcttcaaggactgaactttaagatatgaatacatcttggaagatgtggttttcaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="100086" stop="104502"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100389" g_stop="100610" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="248" r_length="222" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101697" g_stop="101966" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="518" r_length="270" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103990" g_stop="104202" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="519" r_stop="731" r_length="213" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E723894" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>705</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E723894" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100389" e_stop="100610"/>
          <exon e_start="101697" e_stop="101966"/>
          <exon e_start="103990" e_stop="104202"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACAGGAAAGTGAGGATGTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTGGTAAAATTTAATTTCGCATCATCATATATTCCAACTTATAGGGTTTTCAATCGTTCTGTGCTTATTTCTTCCACTGCAATTATTTTAGTACTACTTTCTCTGATTGAAGGACGGAGAAATCTAAACTTTTTTATGGTGTTGGACGTAATTGCTTTCTGCTACGTTAATTAGTTGTATATTAATGCATTTTCTGTTAGTAGTAAGTTATACTATCAGTTTATTGTCATGTCTAAATTATGTTTCTTAAGCAGAATTCGGGGTTGTTTCATTTGACGAAAAAGTGAATCTTTAGATTCAAATTTAGCTGTCTATGATGTAATTCTTATCCTTATTGCAAATTGCAAACAGAGTAAATAGCTGAGTAAGTAAGTTACCCATTATTTTAAGCATCTATCATAGTAGGCCAAGATCCCAAGTAGAAATACTTGGCCAGTTAGACTTAAGTTCTTACCAGTCCTCTATGGGGAGCTTAGTCTCCTAGGTGGAGAGAAAGTTTAAAGTTTTGTGCAAGGTATGTTAGATATGAATAAGTTTGTTGATAGTCTATTTGGTGGTAGAAGCTCACTTAGAATGAAAGACCCTTAATTGCTAGCCGGAGCAATTAATGAGGCAAGACTTAGAGGGAAAAGATCGTATTTGAGGATATTGCAAGTCTATTATGTTGGCATTCTTTGTCGTTACTTAGAAAAGTTGTGATGGCAAGGATGGACTTGTTGAAATAGAAATCTTTGGTAAATTACATCCTATCAATCAGGCTTTTGAAGAATGGATGTTTGCTTGATGGTTTTAAGTAAAGGATACATATAACTGTACTATCTATCAATTTATGCCTACAAAAGAGTGTCAGAGAAATCTTCCCCCAACCTTATGGCTACTCCAGGTTGTGTGCATCTATGTTCTTGTGATGTTATGTTATACAGGGCGTCCTTTTGCTCATTTTGTGTTTATTTATCATTGCATATTTATATATTTCTCTTATTATGCTTGGAATGTACAACTTATGTTTTCATTTAAGAATAGCCGAGGTAGTAAGTCACTCATCTAAGAATTGCTGACATGTGTTTTATTCACTTTCATGTCTTGTAGCTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAGGTAGGTATACAAATTGATACTTCAATATGCATCAGAACTTTTGAATTATTTGCACCCCTCGACTCTTTATGTGTACCTGCTACCTCCCACCAACACAGTTACAAGTAACTTTGCCCATCAAAGTTGAGGTAGATGGGAAGAGATCATCTAGTGTCTTTTGTGTTTGCCTGGATTCTAATCTTGGTCCCTAAGAACAGTTTTTTGTGTTTTTAGGTTATGTTACCAAACTGGAAGGTGTAGTACATGGTTTATACTTCCTTAGTTGTTTACTATGTTGATGAACTACTGTCAAGTTGAAGTTTTGTTCTTAATATGGTGAATCATCATAACTCTTGAAATTGGGGATTGAGCACTTTGTTGCTGAGAAGAACTGGTATAACTACCATAAATAACTTGGACAGAATGTAGAATTCTCTGTACTCAGTAGTCAATTCAACCTCCTACACCACATAGTTCACCTTGTCGATCATATCTTCTCTTCCCCAAACACGCAACTGCTAAGCTGATCCTTTTTTCCATTCGTTCACATCCTTTGAAGTCTTTAACTGGTTTTTTTAATACCAAGAAATCTGTCTGGATCCTGCCCTTTGGACCAACTGCGGCCTTTGAAAAATGGGGATAGTGGGCCAACCTTAAAATGGCTTCTCTTTTCAATTTTTTTTTAAAAATGTGATGGGTAAGAAAATCTTTGCTACCTCTTGAGTCTTGCATCTAGATTGCTAACCCTATTGTACTTTTATCAAATTGCTCTCTTATTGCCAAGTTCCTCAATGTAAGGTCCCTAATTAGTAATATCTATAAGTTGACTCTATATGAGAACACAACAAAGGGATTGTATCCCAAATGTTCCCTAACTGCCTTTCTAATTAGGAAGGTTTTCCATATGGATGGGCATTCAAGAATTGTCTAGATATGACCTGATTCATTGCAGACATCCAAAGAAAACATATTCTAGATATCTTTGGCTGCCTCATAGTGTAGAAAAAGCTGTTTACTGATTTTGCTCATGGAATGCACATGTAGTTGCCGCTGCTCCACATATTCGCCCTTTTGTTGTTTGATAATCTTGAGTTATTACAAGTTCCATACTATTGTCCACCCAAAGAAGGCTACTTTTATGGCAGATTTTGTCTTCCGGATGAACTTCCACGGAGGTTCAACATTTACCGTCCTGCCTCAATAGTGTACACCGATTAAATGGAAAAGGATTTCACTGGGAAAGACTACCTTTTCCTTCTGTCAAGATCAGTCTGTTAGGTTCCGAGTTTATGACTTAGATCAGTGACAAGTAAAAGTGAAAATCTATTTTTGGAATAGTGGACAAGTAATAGTGAAAATCTATTTTGGAATAGTGGACAAATAATAGTGAACAGAGTACTTTTTTTTATTTTTACATAGTTACATTGAGTTCACACCTTCCAGTTATAGTTATCCTCGTTGAAAATGTAAATGACTTTGTTTGGCACTTGTTGCTAGATAGTAGATTGTTACTCCTTGGATCAAATGATCAGTTCACACGGGTTTAAGCTACTCGTAGAAAAGTTAATAGAAAAAATATGTATCATGAACAAGACTTTATATTTTACACCATCTGTTTCAATGTATGTGAAACTCTTTCCATTTTGGGGATATTCTAAAATGTTTGACATGCTTCCTCCTATATTATTACTTTATACATCTTTTGTGAATCTTAATTCATTTAACTATTCAAATCTTAAACTTTGATGTGATCCATACTAAAATTTCAAACACAATTACTGTTATTATACCTAAGTTAAAGCAACATCCTGAACTCCGTATCTAGTACTGTCTATTCAAGCTTGCAACCAGATGCTAGACAAGACATGAACTTCACACCTCTTGCTGTGTCTAGATTAAGTTTTTTGGAATTTACTTCAGCCTTCATCTCTTCATCTCGAAGACAATTTTGAGCACTGAATGCAATTGCTGTCATCATGGTTCGTGCCAAGTTTTGATTCATACTGAATGGAGACTAACAAGTTGCATTGTTTTATTATTACAGAAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAGATGTGGTTTTCAATT</genome_strand>
        <mrna_strand>TTGACAGGAAAGTGAGCCTTTCACTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAAAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAGATGTGGTTTTCAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E723320" ref_strand="+" ref_description="SGN-E723320 [FC20AF01]">
      <seq>gggcgattggcggccaatcggccgaattgacaggaaagtgaggacgtctctcggaatttcgcttcaatggcaactcccctccgttatcaggagtactacaacctcggcagctcaacgtacgaccgatgtctttctgtcgtttcctacggttcattccggtcgtgctcttcagagctcggccattcccagtagctcaattgctaccggcaaacgggatggacggttaagatcccttcgttgtctatctgctctggatcctaacttgaagtctacgctggataaggttgtcacatcacaaaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggattgaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgttgtagaagcatacaagagcggagagttgcaagaattgctagaaaggacattgtgctcctgatggattcagatgtaataagcccattattaaattgtatggactatcaggtgtctgttgttcttactgcagatgatgaaaatattttactatgtttatttcctcttcaaggactgaactttaagatatgaatacatcttggaagatgtggttttcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="100086" stop="104500"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100389" g_stop="100610" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="248" r_length="222" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101697" g_stop="101966" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="518" r_length="270" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103990" g_stop="104200" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="519" r_stop="729" r_length="211" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E723320" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E723320" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100389" e_stop="100610"/>
          <exon e_start="101697" e_stop="101966"/>
          <exon e_start="103990" e_stop="104200"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACAGGAAAGTGAGGATGTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTGGTAAAATTTAATTTCGCATCATCATATATTCCAACTTATAGGGTTTTCAATCGTTCTGTGCTTATTTCTTCCACTGCAATTATTTTAGTACTACTTTCTCTGATTGAAGGACGGAGAAATCTAAACTTTTTTATGGTGTTGGACGTAATTGCTTTCTGCTACGTTAATTAGTTGTATATTAATGCATTTTCTGTTAGTAGTAAGTTATACTATCAGTTTATTGTCATGTCTAAATTATGTTTCTTAAGCAGAATTCGGGGTTGTTTCATTTGACGAAAAAGTGAATCTTTAGATTCAAATTTAGCTGTCTATGATGTAATTCTTATCCTTATTGCAAATTGCAAACAGAGTAAATAGCTGAGTAAGTAAGTTACCCATTATTTTAAGCATCTATCATAGTAGGCCAAGATCCCAAGTAGAAATACTTGGCCAGTTAGACTTAAGTTCTTACCAGTCCTCTATGGGGAGCTTAGTCTCCTAGGTGGAGAGAAAGTTTAAAGTTTTGTGCAAGGTATGTTAGATATGAATAAGTTTGTTGATAGTCTATTTGGTGGTAGAAGCTCACTTAGAATGAAAGACCCTTAATTGCTAGCCGGAGCAATTAATGAGGCAAGACTTAGAGGGAAAAGATCGTATTTGAGGATATTGCAAGTCTATTATGTTGGCATTCTTTGTCGTTACTTAGAAAAGTTGTGATGGCAAGGATGGACTTGTTGAAATAGAAATCTTTGGTAAATTACATCCTATCAATCAGGCTTTTGAAGAATGGATGTTTGCTTGATGGTTTTAAGTAAAGGATACATATAACTGTACTATCTATCAATTTATGCCTACAAAAGAGTGTCAGAGAAATCTTCCCCCAACCTTATGGCTACTCCAGGTTGTGTGCATCTATGTTCTTGTGATGTTATGTTATACAGGGCGTCCTTTTGCTCATTTTGTGTTTATTTATCATTGCATATTTATATATTTCTCTTATTATGCTTGGAATGTACAACTTATGTTTTCATTTAAGAATAGCCGAGGTAGTAAGTCACTCATCTAAGAATTGCTGACATGTGTTTTATTCACTTTCATGTCTTGTAGCTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAGGTAGGTATACAAATTGATACTTCAATATGCATCAGAACTTTTGAATTATTTGCACCCCTCGACTCTTTATGTGTACCTGCTACCTCCCACCAACACAGTTACAAGTAACTTTGCCCATCAAAGTTGAGGTAGATGGGAAGAGATCATCTAGTGTCTTTTGTGTTTGCCTGGATTCTAATCTTGGTCCCTAAGAACAGTTTTTTGTGTTTTTAGGTTATGTTACCAAACTGGAAGGTGTAGTACATGGTTTATACTTCCTTAGTTGTTTACTATGTTGATGAACTACTGTCAAGTTGAAGTTTTGTTCTTAATATGGTGAATCATCATAACTCTTGAAATTGGGGATTGAGCACTTTGTTGCTGAGAAGAACTGGTATAACTACCATAAATAACTTGGACAGAATGTAGAATTCTCTGTACTCAGTAGTCAATTCAACCTCCTACACCACATAGTTCACCTTGTCGATCATATCTTCTCTTCCCCAAACACGCAACTGCTAAGCTGATCCTTTTTTCCATTCGTTCACATCCTTTGAAGTCTTTAACTGGTTTTTTTAATACCAAGAAATCTGTCTGGATCCTGCCCTTTGGACCAACTGCGGCCTTTGAAAAATGGGGATAGTGGGCCAACCTTAAAATGGCTTCTCTTTTCAATTTTTTTTTAAAAATGTGATGGGTAAGAAAATCTTTGCTACCTCTTGAGTCTTGCATCTAGATTGCTAACCCTATTGTACTTTTATCAAATTGCTCTCTTATTGCCAAGTTCCTCAATGTAAGGTCCCTAATTAGTAATATCTATAAGTTGACTCTATATGAGAACACAACAAAGGGATTGTATCCCAAATGTTCCCTAACTGCCTTTCTAATTAGGAAGGTTTTCCATATGGATGGGCATTCAAGAATTGTCTAGATATGACCTGATTCATTGCAGACATCCAAAGAAAACATATTCTAGATATCTTTGGCTGCCTCATAGTGTAGAAAAAGCTGTTTACTGATTTTGCTCATGGAATGCACATGTAGTTGCCGCTGCTCCACATATTCGCCCTTTTGTTGTTTGATAATCTTGAGTTATTACAAGTTCCATACTATTGTCCACCCAAAGAAGGCTACTTTTATGGCAGATTTTGTCTTCCGGATGAACTTCCACGGAGGTTCAACATTTACCGTCCTGCCTCAATAGTGTACACCGATTAAATGGAAAAGGATTTCACTGGGAAAGACTACCTTTTCCTTCTGTCAAGATCAGTCTGTTAGGTTCCGAGTTTATGACTTAGATCAGTGACAAGTAAAAGTGAAAATCTATTTTTGGAATAGTGGACAAGTAATAGTGAAAATCTATTTTGGAATAGTGGACAAATAATAGTGAACAGAGTACTTTTTTTTATTTTTACATAGTTACATTGAGTTCACACCTTCCAGTTATAGTTATCCTCGTTGAAAATGTAAATGACTTTGTTTGGCACTTGTTGCTAGATAGTAGATTGTTACTCCTTGGATCAAATGATCAGTTCACACGGGTTTAAGCTACTCGTAGAAAAGTTAATAGAAAAAATATGTATCATGAACAAGACTTTATATTTTACACCATCTGTTTCAATGTATGTGAAACTCTTTCCATTTTGGGGATATTCTAAAATGTTTGACATGCTTCCTCCTATATTATTACTTTATACATCTTTTGTGAATCTTAATTCATTTAACTATTCAAATCTTAAACTTTGATGTGATCCATACTAAAATTTCAAACACAATTACTGTTATTATACCTAAGTTAAAGCAACATCCTGAACTCCGTATCTAGTACTGTCTATTCAAGCTTGCAACCAGATGCTAGACAAGACATGAACTTCACACCTCTTGCTGTGTCTAGATTAAGTTTTTTGGAATTTACTTCAGCCTTCATCTCTTCATCTCGAAGACAATTTTGAGCACTGAATGCAATTGCTGTCATCATGGTTCGTGCCAAGTTTTGATTCATACTGAATGGAGACTAACAAGTTGCATTGTTTTATTATTACAGAAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAGATGTGGTTTTCAA</genome_strand>
        <mrna_strand>TTGACAGGAAAGTGAGGACGTCTCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAGATGTGGTTTTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E723155" ref_strand="+" ref_description="SGN-E723155 [FC19CC10]">
      <seq>caggaaagtgaggatgtcgctcggaatttcgcttcaatggcaactcccctccgttatcaggagtactacaacctcggcagctcaacgtacgaccgatgtctttctgtcgtttcctacggttcattccggtcgtgctcttcagagctcggccattcccagtagctcaattgctaccggcaaacgggatggacggttaagatcccttcgttgtctatctgctctggatcctaacttgaagtctacgctggataaggttgtcacatcacaaaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggattgaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgttgtagaagcatacaagagcggagagttgcaagaattgctagaaaggacattgtgctcctgatggattcagatgtaataagcccattattaaattgtatggactatcaggtgtctgttgttcttactgcagatgatgaaaatattttactatgtttatttcctcttcaaggactgaactttaagatatgaatacatcttggaagatgtggttttcaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="100093" stop="104500"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100393" g_stop="100610" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="218" r_length="218" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101697" g_stop="101966" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="488" r_length="270" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103990" g_stop="104211" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="489" r_stop="710" r_length="222" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E723155" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>710</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E723155" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100393" e_stop="100610"/>
          <exon e_start="101697" e_stop="101966"/>
          <exon e_start="103990" e_stop="104211"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGAAAGTGAGGATGTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTGGTAAAATTTAATTTCGCATCATCATATATTCCAACTTATAGGGTTTTCAATCGTTCTGTGCTTATTTCTTCCACTGCAATTATTTTAGTACTACTTTCTCTGATTGAAGGACGGAGAAATCTAAACTTTTTTATGGTGTTGGACGTAATTGCTTTCTGCTACGTTAATTAGTTGTATATTAATGCATTTTCTGTTAGTAGTAAGTTATACTATCAGTTTATTGTCATGTCTAAATTATGTTTCTTAAGCAGAATTCGGGGTTGTTTCATTTGACGAAAAAGTGAATCTTTAGATTCAAATTTAGCTGTCTATGATGTAATTCTTATCCTTATTGCAAATTGCAAACAGAGTAAATAGCTGAGTAAGTAAGTTACCCATTATTTTAAGCATCTATCATAGTAGGCCAAGATCCCAAGTAGAAATACTTGGCCAGTTAGACTTAAGTTCTTACCAGTCCTCTATGGGGAGCTTAGTCTCCTAGGTGGAGAGAAAGTTTAAAGTTTTGTGCAAGGTATGTTAGATATGAATAAGTTTGTTGATAGTCTATTTGGTGGTAGAAGCTCACTTAGAATGAAAGACCCTTAATTGCTAGCCGGAGCAATTAATGAGGCAAGACTTAGAGGGAAAAGATCGTATTTGAGGATATTGCAAGTCTATTATGTTGGCATTCTTTGTCGTTACTTAGAAAAGTTGTGATGGCAAGGATGGACTTGTTGAAATAGAAATCTTTGGTAAATTACATCCTATCAATCAGGCTTTTGAAGAATGGATGTTTGCTTGATGGTTTTAAGTAAAGGATACATATAACTGTACTATCTATCAATTTATGCCTACAAAAGAGTGTCAGAGAAATCTTCCCCCAACCTTATGGCTACTCCAGGTTGTGTGCATCTATGTTCTTGTGATGTTATGTTATACAGGGCGTCCTTTTGCTCATTTTGTGTTTATTTATCATTGCATATTTATATATTTCTCTTATTATGCTTGGAATGTACAACTTATGTTTTCATTTAAGAATAGCCGAGGTAGTAAGTCACTCATCTAAGAATTGCTGACATGTGTTTTATTCACTTTCATGTCTTGTAGCTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAGGTAGGTATACAAATTGATACTTCAATATGCATCAGAACTTTTGAATTATTTGCACCCCTCGACTCTTTATGTGTACCTGCTACCTCCCACCAACACAGTTACAAGTAACTTTGCCCATCAAAGTTGAGGTAGATGGGAAGAGATCATCTAGTGTCTTTTGTGTTTGCCTGGATTCTAATCTTGGTCCCTAAGAACAGTTTTTTGTGTTTTTAGGTTATGTTACCAAACTGGAAGGTGTAGTACATGGTTTATACTTCCTTAGTTGTTTACTATGTTGATGAACTACTGTCAAGTTGAAGTTTTGTTCTTAATATGGTGAATCATCATAACTCTTGAAATTGGGGATTGAGCACTTTGTTGCTGAGAAGAACTGGTATAACTACCATAAATAACTTGGACAGAATGTAGAATTCTCTGTACTCAGTAGTCAATTCAACCTCCTACACCACATAGTTCACCTTGTCGATCATATCTTCTCTTCCCCAAACACGCAACTGCTAAGCTGATCCTTTTTTCCATTCGTTCACATCCTTTGAAGTCTTTAACTGGTTTTTTTAATACCAAGAAATCTGTCTGGATCCTGCCCTTTGGACCAACTGCGGCCTTTGAAAAATGGGGATAGTGGGCCAACCTTAAAATGGCTTCTCTTTTCAATTTTTTTTTAAAAATGTGATGGGTAAGAAAATCTTTGCTACCTCTTGAGTCTTGCATCTAGATTGCTAACCCTATTGTACTTTTATCAAATTGCTCTCTTATTGCCAAGTTCCTCAATGTAAGGTCCCTAATTAGTAATATCTATAAGTTGACTCTATATGAGAACACAACAAAGGGATTGTATCCCAAATGTTCCCTAACTGCCTTTCTAATTAGGAAGGTTTTCCATATGGATGGGCATTCAAGAATTGTCTAGATATGACCTGATTCATTGCAGACATCCAAAGAAAACATATTCTAGATATCTTTGGCTGCCTCATAGTGTAGAAAAAGCTGTTTACTGATTTTGCTCATGGAATGCACATGTAGTTGCCGCTGCTCCACATATTCGCCCTTTTGTTGTTTGATAATCTTGAGTTATTACAAGTTCCATACTATTGTCCACCCAAAGAAGGCTACTTTTATGGCAGATTTTGTCTTCCGGATGAACTTCCACGGAGGTTCAACATTTACCGTCCTGCCTCAATAGTGTACACCGATTAAATGGAAAAGGATTTCACTGGGAAAGACTACCTTTTCCTTCTGTCAAGATCAGTCTGTTAGGTTCCGAGTTTATGACTTAGATCAGTGACAAGTAAAAGTGAAAATCTATTTTTGGAATAGTGGACAAGTAATAGTGAAAATCTATTTTGGAATAGTGGACAAATAATAGTGAACAGAGTACTTTTTTTTATTTTTACATAGTTACATTGAGTTCACACCTTCCAGTTATAGTTATCCTCGTTGAAAATGTAAATGACTTTGTTTGGCACTTGTTGCTAGATAGTAGATTGTTACTCCTTGGATCAAATGATCAGTTCACACGGGTTTAAGCTACTCGTAGAAAAGTTAATAGAAAAAATATGTATCATGAACAAGACTTTATATTTTACACCATCTGTTTCAATGTATGTGAAACTCTTTCCATTTTGGGGATATTCTAAAATGTTTGACATGCTTCCTCCTATATTATTACTTTATACATCTTTTGTGAATCTTAATTCATTTAACTATTCAAATCTTAAACTTTGATGTGATCCATACTAAAATTTCAAACACAATTACTGTTATTATACCTAAGTTAAAGCAACATCCTGAACTCCGTATCTAGTACTGTCTATTCAAGCTTGCAACCAGATGCTAGACAAGACATGAACTTCACACCTCTTGCTGTGTCTAGATTAAGTTTTTTGGAATTTACTTCAGCCTTCATCTCTTCATCTCGAAGACAATTTTGAGCACTGAATGCAATTGCTGTCATCATGGTTCGTGCCAAGTTTTGATTCATACTGAATGGAGACTAACAAGTTGCATTGTTTTATTATTACAGAAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAGATGTGGTTTTCAATTGCATCTACT</genome_strand>
        <mrna_strand>CAGGAAAGTGAGGATGTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAGATGTGGTTTTCAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E289863" ref_strand="+" ref_description="SGN-E289863 [cLET-9-J22]">
      <seq>aggaaagtgaggatgtcgctcggaatttcgcttcaatggcaactcccctccgttatcaggagtactacaacctcggcagctcaacgtacgaccgatgtctttctgtcgtttcctacggttcattccggtcgtgctcttcagagctcggccattcccagtagctcaattgctaccggcaaacgggatggacggttaagatcccttcgttgtctatctgctctggatcctaacttgaagtctacgctggataaggttgtcacatcacaaaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="100094" stop="102101"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100394" g_stop="100610" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="217" r_length="217" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101697" g_stop="101801" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="322" r_length="105" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E289863" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>322</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E289863" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100394" e_stop="100610"/>
          <exon e_start="101697" e_stop="101801"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAAAGTGAGGATGTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTGGTAAAATTTAATTTCGCATCATCATATATTCCAACTTATAGGGTTTTCAATCGTTCTGTGCTTATTTCTTCCACTGCAATTATTTTAGTACTACTTTCTCTGATTGAAGGACGGAGAAATCTAAACTTTTTTATGGTGTTGGACGTAATTGCTTTCTGCTACGTTAATTAGTTGTATATTAATGCATTTTCTGTTAGTAGTAAGTTATACTATCAGTTTATTGTCATGTCTAAATTATGTTTCTTAAGCAGAATTCGGGGTTGTTTCATTTGACGAAAAAGTGAATCTTTAGATTCAAATTTAGCTGTCTATGATGTAATTCTTATCCTTATTGCAAATTGCAAACAGAGTAAATAGCTGAGTAAGTAAGTTACCCATTATTTTAAGCATCTATCATAGTAGGCCAAGATCCCAAGTAGAAATACTTGGCCAGTTAGACTTAAGTTCTTACCAGTCCTCTATGGGGAGCTTAGTCTCCTAGGTGGAGAGAAAGTTTAAAGTTTTGTGCAAGGTATGTTAGATATGAATAAGTTTGTTGATAGTCTATTTGGTGGTAGAAGCTCACTTAGAATGAAAGACCCTTAATTGCTAGCCGGAGCAATTAATGAGGCAAGACTTAGAGGGAAAAGATCGTATTTGAGGATATTGCAAGTCTATTATGTTGGCATTCTTTGTCGTTACTTAGAAAAGTTGTGATGGCAAGGATGGACTTGTTGAAATAGAAATCTTTGGTAAATTACATCCTATCAATCAGGCTTTTGAAGAATGGATGTTTGCTTGATGGTTTTAAGTAAAGGATACATATAACTGTACTATCTATCAATTTATGCCTACAAAAGAGTGTCAGAGAAATCTTCCCCCAACCTTATGGCTACTCCAGGTTGTGTGCATCTATGTTCTTGTGATGTTATGTTATACAGGGCGTCCTTTTGCTCATTTTGTGTTTATTTATCATTGCATATTTATATATTTCTCTTATTATGCTTGGAATGTACAACTTATGTTTTCATTTAAGAATAGCCGAGGTAGTAAGTCACTCATCTAAGAATTGCTGACATGTGTTTTATTCACTTTCATGTCTTGTAGCTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAA</genome_strand>
        <mrna_strand>AGGAAAGTGAGGATGTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E734433" ref_strand="+" ref_description="SGN-E734433 [LB12CF06]">
      <seq>ggaaagtgaggatgtcgctcggaatttcgcttcaatggcaactcccctccgttatcaggagtactacaacctcggcagctcaacgtacgaccgatgtctttctgtcgtttcctacggttcattccggtcgtgctcttcagagctcggccattcccagtagctcaattgctaccggcaaacgggatggacggttaagatcccttcgttgtctatctgctctggatcctaacttgaagtctacgctggataaggttgtcacatcacaaaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggattgaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgttgtagaagcatacaagagcggagagttgcaagaattgctagaaaggacattgtgctcctgatggattcagatgtaataagcccattattaaattgtatggactatcaggtgtctgttgttcttactgcagatgatgaaaatattttactatgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="100095" stop="104438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100395" g_stop="100610" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101697" g_stop="101966" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="486" r_length="270" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103990" g_stop="104138" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="487" r_stop="635" r_length="149" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E734433" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>635</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E734433" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100395" e_stop="100610"/>
          <exon e_start="101697" e_stop="101966"/>
          <exon e_start="103990" e_stop="104138"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAGTGAGGATGTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTGGTAAAATTTAATTTCGCATCATCATATATTCCAACTTATAGGGTTTTCAATCGTTCTGTGCTTATTTCTTCCACTGCAATTATTTTAGTACTACTTTCTCTGATTGAAGGACGGAGAAATCTAAACTTTTTTATGGTGTTGGACGTAATTGCTTTCTGCTACGTTAATTAGTTGTATATTAATGCATTTTCTGTTAGTAGTAAGTTATACTATCAGTTTATTGTCATGTCTAAATTATGTTTCTTAAGCAGAATTCGGGGTTGTTTCATTTGACGAAAAAGTGAATCTTTAGATTCAAATTTAGCTGTCTATGATGTAATTCTTATCCTTATTGCAAATTGCAAACAGAGTAAATAGCTGAGTAAGTAAGTTACCCATTATTTTAAGCATCTATCATAGTAGGCCAAGATCCCAAGTAGAAATACTTGGCCAGTTAGACTTAAGTTCTTACCAGTCCTCTATGGGGAGCTTAGTCTCCTAGGTGGAGAGAAAGTTTAAAGTTTTGTGCAAGGTATGTTAGATATGAATAAGTTTGTTGATAGTCTATTTGGTGGTAGAAGCTCACTTAGAATGAAAGACCCTTAATTGCTAGCCGGAGCAATTAATGAGGCAAGACTTAGAGGGAAAAGATCGTATTTGAGGATATTGCAAGTCTATTATGTTGGCATTCTTTGTCGTTACTTAGAAAAGTTGTGATGGCAAGGATGGACTTGTTGAAATAGAAATCTTTGGTAAATTACATCCTATCAATCAGGCTTTTGAAGAATGGATGTTTGCTTGATGGTTTTAAGTAAAGGATACATATAACTGTACTATCTATCAATTTATGCCTACAAAAGAGTGTCAGAGAAATCTTCCCCCAACCTTATGGCTACTCCAGGTTGTGTGCATCTATGTTCTTGTGATGTTATGTTATACAGGGCGTCCTTTTGCTCATTTTGTGTTTATTTATCATTGCATATTTATATATTTCTCTTATTATGCTTGGAATGTACAACTTATGTTTTCATTTAAGAATAGCCGAGGTAGTAAGTCACTCATCTAAGAATTGCTGACATGTGTTTTATTCACTTTCATGTCTTGTAGCTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAGGTAGGTATACAAATTGATACTTCAATATGCATCAGAACTTTTGAATTATTTGCACCCCTCGACTCTTTATGTGTACCTGCTACCTCCCACCAACACAGTTACAAGTAACTTTGCCCATCAAAGTTGAGGTAGATGGGAAGAGATCATCTAGTGTCTTTTGTGTTTGCCTGGATTCTAATCTTGGTCCCTAAGAACAGTTTTTTGTGTTTTTAGGTTATGTTACCAAACTGGAAGGTGTAGTACATGGTTTATACTTCCTTAGTTGTTTACTATGTTGATGAACTACTGTCAAGTTGAAGTTTTGTTCTTAATATGGTGAATCATCATAACTCTTGAAATTGGGGATTGAGCACTTTGTTGCTGAGAAGAACTGGTATAACTACCATAAATAACTTGGACAGAATGTAGAATTCTCTGTACTCAGTAGTCAATTCAACCTCCTACACCACATAGTTCACCTTGTCGATCATATCTTCTCTTCCCCAAACACGCAACTGCTAAGCTGATCCTTTTTTCCATTCGTTCACATCCTTTGAAGTCTTTAACTGGTTTTTTTAATACCAAGAAATCTGTCTGGATCCTGCCCTTTGGACCAACTGCGGCCTTTGAAAAATGGGGATAGTGGGCCAACCTTAAAATGGCTTCTCTTTTCAATTTTTTTTTAAAAATGTGATGGGTAAGAAAATCTTTGCTACCTCTTGAGTCTTGCATCTAGATTGCTAACCCTATTGTACTTTTATCAAATTGCTCTCTTATTGCCAAGTTCCTCAATGTAAGGTCCCTAATTAGTAATATCTATAAGTTGACTCTATATGAGAACACAACAAAGGGATTGTATCCCAAATGTTCCCTAACTGCCTTTCTAATTAGGAAGGTTTTCCATATGGATGGGCATTCAAGAATTGTCTAGATATGACCTGATTCATTGCAGACATCCAAAGAAAACATATTCTAGATATCTTTGGCTGCCTCATAGTGTAGAAAAAGCTGTTTACTGATTTTGCTCATGGAATGCACATGTAGTTGCCGCTGCTCCACATATTCGCCCTTTTGTTGTTTGATAATCTTGAGTTATTACAAGTTCCATACTATTGTCCACCCAAAGAAGGCTACTTTTATGGCAGATTTTGTCTTCCGGATGAACTTCCACGGAGGTTCAACATTTACCGTCCTGCCTCAATAGTGTACACCGATTAAATGGAAAAGGATTTCACTGGGAAAGACTACCTTTTCCTTCTGTCAAGATCAGTCTGTTAGGTTCCGAGTTTATGACTTAGATCAGTGACAAGTAAAAGTGAAAATCTATTTTTGGAATAGTGGACAAGTAATAGTGAAAATCTATTTTGGAATAGTGGACAAATAATAGTGAACAGAGTACTTTTTTTTATTTTTACATAGTTACATTGAGTTCACACCTTCCAGTTATAGTTATCCTCGTTGAAAATGTAAATGACTTTGTTTGGCACTTGTTGCTAGATAGTAGATTGTTACTCCTTGGATCAAATGATCAGTTCACACGGGTTTAAGCTACTCGTAGAAAAGTTAATAGAAAAAATATGTATCATGAACAAGACTTTATATTTTACACCATCTGTTTCAATGTATGTGAAACTCTTTCCATTTTGGGGATATTCTAAAATGTTTGACATGCTTCCTCCTATATTATTACTTTATACATCTTTTGTGAATCTTAATTCATTTAACTATTCAAATCTTAAACTTTGATGTGATCCATACTAAAATTTCAAACACAATTACTGTTATTATACCTAAGTTAAAGCAACATCCTGAACTCCGTATCTAGTACTGTCTATTCAAGCTTGCAACCAGATGCTAGACAAGACATGAACTTCACACCTCTTGCTGTGTCTAGATTAAGTTTTTTGGAATTTACTTCAGCCTTCATCTCTTCATCTCGAAGACAATTTTGAGCACTGAATGCAATTGCTGTCATCATGGTTCGTGCCAAGTTTTGATTCATACTGAATGGAGACTAACAAGTTGCATTGTTTTATTATTACAGAAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTT</genome_strand>
        <mrna_strand>GGAAAGTGAGGATGTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E735716" ref_strand="+" ref_description="SGN-E735716 [LC02CH10]">
      <seq>cggtatgtcgctcggaatttcgcttcaatggcaactcccctccgttatcaggagtactacaacctcggcagctcaacgtacgaccgatgtctttctgtcgtttcctacggttcattccggtcgtgctcttcagagctcggccattcccagtagctcaattgctaccggcaaacgggatggacggttaagatcccttcgttgtctatctgctctggatcctaacttgaagtctacgctggataaggttgtcacatcacaaaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggattgaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgttgtagaagcatacaagagcggagagttgcaagaattgctagaaaggacattgtgctcctgatggattcagatgtaataagcccattattaaattgtatggactatcaggtgtctgttgttcttactgcagatgatgaaaatattttactatgtttatttcctcttcaaggactgaactttaagatatgaatacatcttgaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="100104" stop="104487"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100402" g_stop="100610" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="209" r_length="209" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101697" g_stop="101966" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="479" r_length="270" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103990" g_stop="104182" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="480" r_stop="672" r_length="193" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E735716" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>672</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E735716" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100402" e_stop="100610"/>
          <exon e_start="101697" e_stop="101966"/>
          <exon e_start="103990" e_stop="104182"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGATGTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTGGTAAAATTTAATTTCGCATCATCATATATTCCAACTTATAGGGTTTTCAATCGTTCTGTGCTTATTTCTTCCACTGCAATTATTTTAGTACTACTTTCTCTGATTGAAGGACGGAGAAATCTAAACTTTTTTATGGTGTTGGACGTAATTGCTTTCTGCTACGTTAATTAGTTGTATATTAATGCATTTTCTGTTAGTAGTAAGTTATACTATCAGTTTATTGTCATGTCTAAATTATGTTTCTTAAGCAGAATTCGGGGTTGTTTCATTTGACGAAAAAGTGAATCTTTAGATTCAAATTTAGCTGTCTATGATGTAATTCTTATCCTTATTGCAAATTGCAAACAGAGTAAATAGCTGAGTAAGTAAGTTACCCATTATTTTAAGCATCTATCATAGTAGGCCAAGATCCCAAGTAGAAATACTTGGCCAGTTAGACTTAAGTTCTTACCAGTCCTCTATGGGGAGCTTAGTCTCCTAGGTGGAGAGAAAGTTTAAAGTTTTGTGCAAGGTATGTTAGATATGAATAAGTTTGTTGATAGTCTATTTGGTGGTAGAAGCTCACTTAGAATGAAAGACCCTTAATTGCTAGCCGGAGCAATTAATGAGGCAAGACTTAGAGGGAAAAGATCGTATTTGAGGATATTGCAAGTCTATTATGTTGGCATTCTTTGTCGTTACTTAGAAAAGTTGTGATGGCAAGGATGGACTTGTTGAAATAGAAATCTTTGGTAAATTACATCCTATCAATCAGGCTTTTGAAGAATGGATGTTTGCTTGATGGTTTTAAGTAAAGGATACATATAACTGTACTATCTATCAATTTATGCCTACAAAAGAGTGTCAGAGAAATCTTCCCCCAACCTTATGGCTACTCCAGGTTGTGTGCATCTATGTTCTTGTGATGTTATGTTATACAGGGCGTCCTTTTGCTCATTTTGTGTTTATTTATCATTGCATATTTATATATTTCTCTTATTATGCTTGGAATGTACAACTTATGTTTTCATTTAAGAATAGCCGAGGTAGTAAGTCACTCATCTAAGAATTGCTGACATGTGTTTTATTCACTTTCATGTCTTGTAGCTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAGGTAGGTATACAAATTGATACTTCAATATGCATCAGAACTTTTGAATTATTTGCACCCCTCGACTCTTTATGTGTACCTGCTACCTCCCACCAACACAGTTACAAGTAACTTTGCCCATCAAAGTTGAGGTAGATGGGAAGAGATCATCTAGTGTCTTTTGTGTTTGCCTGGATTCTAATCTTGGTCCCTAAGAACAGTTTTTTGTGTTTTTAGGTTATGTTACCAAACTGGAAGGTGTAGTACATGGTTTATACTTCCTTAGTTGTTTACTATGTTGATGAACTACTGTCAAGTTGAAGTTTTGTTCTTAATATGGTGAATCATCATAACTCTTGAAATTGGGGATTGAGCACTTTGTTGCTGAGAAGAACTGGTATAACTACCATAAATAACTTGGACAGAATGTAGAATTCTCTGTACTCAGTAGTCAATTCAACCTCCTACACCACATAGTTCACCTTGTCGATCATATCTTCTCTTCCCCAAACACGCAACTGCTAAGCTGATCCTTTTTTCCATTCGTTCACATCCTTTGAAGTCTTTAACTGGTTTTTTTAATACCAAGAAATCTGTCTGGATCCTGCCCTTTGGACCAACTGCGGCCTTTGAAAAATGGGGATAGTGGGCCAACCTTAAAATGGCTTCTCTTTTCAATTTTTTTTTAAAAATGTGATGGGTAAGAAAATCTTTGCTACCTCTTGAGTCTTGCATCTAGATTGCTAACCCTATTGTACTTTTATCAAATTGCTCTCTTATTGCCAAGTTCCTCAATGTAAGGTCCCTAATTAGTAATATCTATAAGTTGACTCTATATGAGAACACAACAAAGGGATTGTATCCCAAATGTTCCCTAACTGCCTTTCTAATTAGGAAGGTTTTCCATATGGATGGGCATTCAAGAATTGTCTAGATATGACCTGATTCATTGCAGACATCCAAAGAAAACATATTCTAGATATCTTTGGCTGCCTCATAGTGTAGAAAAAGCTGTTTACTGATTTTGCTCATGGAATGCACATGTAGTTGCCGCTGCTCCACATATTCGCCCTTTTGTTGTTTGATAATCTTGAGTTATTACAAGTTCCATACTATTGTCCACCCAAAGAAGGCTACTTTTATGGCAGATTTTGTCTTCCGGATGAACTTCCACGGAGGTTCAACATTTACCGTCCTGCCTCAATAGTGTACACCGATTAAATGGAAAAGGATTTCACTGGGAAAGACTACCTTTTCCTTCTGTCAAGATCAGTCTGTTAGGTTCCGAGTTTATGACTTAGATCAGTGACAAGTAAAAGTGAAAATCTATTTTTGGAATAGTGGACAAGTAATAGTGAAAATCTATTTTGGAATAGTGGACAAATAATAGTGAACAGAGTACTTTTTTTTATTTTTACATAGTTACATTGAGTTCACACCTTCCAGTTATAGTTATCCTCGTTGAAAATGTAAATGACTTTGTTTGGCACTTGTTGCTAGATAGTAGATTGTTACTCCTTGGATCAAATGATCAGTTCACACGGGTTTAAGCTACTCGTAGAAAAGTTAATAGAAAAAATATGTATCATGAACAAGACTTTATATTTTACACCATCTGTTTCAATGTATGTGAAACTCTTTCCATTTTGGGGATATTCTAAAATGTTTGACATGCTTCCTCCTATATTATTACTTTATACATCTTTTGTGAATCTTAATTCATTTAACTATTCAAATCTTAAACTTTGATGTGATCCATACTAAAATTTCAAACACAATTACTGTTATTATACCTAAGTTAAAGCAACATCCTGAACTCCGTATCTAGTACTGTCTATTCAAGCTTGCAACCAGATGCTAGACAAGACATGAACTTCACACCTCTTGCTGTGTCTAGATTAAGTTTTTTGGAATTTACTTCAGCCTTCATCTCTTCATCTCGAAGACAATTTTGAGCACTGAATGCAATTGCTGTCATCATGGTTCGTGCCAAGTTTTGATTCATACTGAATGGAGACTAACAAGTTGCATTGTTTTATTATTACAGAAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTT</genome_strand>
        <mrna_strand>CGGTATGTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E312608" ref_strand="+" ref_description="SGN-E312608 [cLEZ-20-F13]">
      <seq>gaggatgtcgctcgaaatttagcttcaatggcaactccggtgcgttatgaggagtactacaacctcggcagctcaacgtacgaccgatgtctttctgtcgtttcctacggttcattccggtcgtgctcttcagagctcggccattcccagtagctcaattgctaccggcaaacgggatggacggttaagatcccttcgttgtctatctgctctggatcctaacttgaagtctacgctggataaggttgtcacatcacaaaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggattgaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgttgtagaagcatacaagagcggagagttgcaagaattgctagaaaggacattgtgctcctgatggattcagatgtaataagcccattattaaattgtatggactatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="100102" stop="104390"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100402" g_stop="100610" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="209" r_length="209" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101697" g_stop="101966" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="479" r_length="270" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103990" g_stop="104090" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="480" r_stop="580" r_length="101" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E312608" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>580</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E312608" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100402" e_stop="100610"/>
          <exon e_start="101697" e_stop="101966"/>
          <exon e_start="103990" e_stop="104090"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGATGTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTGGTAAAATTTAATTTCGCATCATCATATATTCCAACTTATAGGGTTTTCAATCGTTCTGTGCTTATTTCTTCCACTGCAATTATTTTAGTACTACTTTCTCTGATTGAAGGACGGAGAAATCTAAACTTTTTTATGGTGTTGGACGTAATTGCTTTCTGCTACGTTAATTAGTTGTATATTAATGCATTTTCTGTTAGTAGTAAGTTATACTATCAGTTTATTGTCATGTCTAAATTATGTTTCTTAAGCAGAATTCGGGGTTGTTTCATTTGACGAAAAAGTGAATCTTTAGATTCAAATTTAGCTGTCTATGATGTAATTCTTATCCTTATTGCAAATTGCAAACAGAGTAAATAGCTGAGTAAGTAAGTTACCCATTATTTTAAGCATCTATCATAGTAGGCCAAGATCCCAAGTAGAAATACTTGGCCAGTTAGACTTAAGTTCTTACCAGTCCTCTATGGGGAGCTTAGTCTCCTAGGTGGAGAGAAAGTTTAAAGTTTTGTGCAAGGTATGTTAGATATGAATAAGTTTGTTGATAGTCTATTTGGTGGTAGAAGCTCACTTAGAATGAAAGACCCTTAATTGCTAGCCGGAGCAATTAATGAGGCAAGACTTAGAGGGAAAAGATCGTATTTGAGGATATTGCAAGTCTATTATGTTGGCATTCTTTGTCGTTACTTAGAAAAGTTGTGATGGCAAGGATGGACTTGTTGAAATAGAAATCTTTGGTAAATTACATCCTATCAATCAGGCTTTTGAAGAATGGATGTTTGCTTGATGGTTTTAAGTAAAGGATACATATAACTGTACTATCTATCAATTTATGCCTACAAAAGAGTGTCAGAGAAATCTTCCCCCAACCTTATGGCTACTCCAGGTTGTGTGCATCTATGTTCTTGTGATGTTATGTTATACAGGGCGTCCTTTTGCTCATTTTGTGTTTATTTATCATTGCATATTTATATATTTCTCTTATTATGCTTGGAATGTACAACTTATGTTTTCATTTAAGAATAGCCGAGGTAGTAAGTCACTCATCTAAGAATTGCTGACATGTGTTTTATTCACTTTCATGTCTTGTAGCTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAGGTAGGTATACAAATTGATACTTCAATATGCATCAGAACTTTTGAATTATTTGCACCCCTCGACTCTTTATGTGTACCTGCTACCTCCCACCAACACAGTTACAAGTAACTTTGCCCATCAAAGTTGAGGTAGATGGGAAGAGATCATCTAGTGTCTTTTGTGTTTGCCTGGATTCTAATCTTGGTCCCTAAGAACAGTTTTTTGTGTTTTTAGGTTATGTTACCAAACTGGAAGGTGTAGTACATGGTTTATACTTCCTTAGTTGTTTACTATGTTGATGAACTACTGTCAAGTTGAAGTTTTGTTCTTAATATGGTGAATCATCATAACTCTTGAAATTGGGGATTGAGCACTTTGTTGCTGAGAAGAACTGGTATAACTACCATAAATAACTTGGACAGAATGTAGAATTCTCTGTACTCAGTAGTCAATTCAACCTCCTACACCACATAGTTCACCTTGTCGATCATATCTTCTCTTCCCCAAACACGCAACTGCTAAGCTGATCCTTTTTTCCATTCGTTCACATCCTTTGAAGTCTTTAACTGGTTTTTTTAATACCAAGAAATCTGTCTGGATCCTGCCCTTTGGACCAACTGCGGCCTTTGAAAAATGGGGATAGTGGGCCAACCTTAAAATGGCTTCTCTTTTCAATTTTTTTTTAAAAATGTGATGGGTAAGAAAATCTTTGCTACCTCTTGAGTCTTGCATCTAGATTGCTAACCCTATTGTACTTTTATCAAATTGCTCTCTTATTGCCAAGTTCCTCAATGTAAGGTCCCTAATTAGTAATATCTATAAGTTGACTCTATATGAGAACACAACAAAGGGATTGTATCCCAAATGTTCCCTAACTGCCTTTCTAATTAGGAAGGTTTTCCATATGGATGGGCATTCAAGAATTGTCTAGATATGACCTGATTCATTGCAGACATCCAAAGAAAACATATTCTAGATATCTTTGGCTGCCTCATAGTGTAGAAAAAGCTGTTTACTGATTTTGCTCATGGAATGCACATGTAGTTGCCGCTGCTCCACATATTCGCCCTTTTGTTGTTTGATAATCTTGAGTTATTACAAGTTCCATACTATTGTCCACCCAAAGAAGGCTACTTTTATGGCAGATTTTGTCTTCCGGATGAACTTCCACGGAGGTTCAACATTTACCGTCCTGCCTCAATAGTGTACACCGATTAAATGGAAAAGGATTTCACTGGGAAAGACTACCTTTTCCTTCTGTCAAGATCAGTCTGTTAGGTTCCGAGTTTATGACTTAGATCAGTGACAAGTAAAAGTGAAAATCTATTTTTGGAATAGTGGACAAGTAATAGTGAAAATCTATTTTGGAATAGTGGACAAATAATAGTGAACAGAGTACTTTTTTTTATTTTTACATAGTTACATTGAGTTCACACCTTCCAGTTATAGTTATCCTCGTTGAAAATGTAAATGACTTTGTTTGGCACTTGTTGCTAGATAGTAGATTGTTACTCCTTGGATCAAATGATCAGTTCACACGGGTTTAAGCTACTCGTAGAAAAGTTAATAGAAAAAATATGTATCATGAACAAGACTTTATATTTTACACCATCTGTTTCAATGTATGTGAAACTCTTTCCATTTTGGGGATATTCTAAAATGTTTGACATGCTTCCTCCTATATTATTACTTTATACATCTTTTGTGAATCTTAATTCATTTAACTATTCAAATCTTAAACTTTGATGTGATCCATACTAAAATTTCAAACACAATTACTGTTATTATACCTAAGTTAAAGCAACATCCTGAACTCCGTATCTAGTACTGTCTATTCAAGCTTGCAACCAGATGCTAGACAAGACATGAACTTCACACCTCTTGCTGTGTCTAGATTAAGTTTTTTGGAATTTACTTCAGCCTTCATCTCTTCATCTCGAAGACAATTTTGAGCACTGAATGCAATTGCTGTCATCATGGTTCGTGCCAAGTTTTGATTCATACTGAATGGAGACTAACAAGTTGCATTGTTTTATTATTACAGAAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATC</genome_strand>
        <mrna_strand>GAGGATGTCGCTCGAAATTTAGCTTCAATGGCAACTCCGGTGCGTTATGAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E735258" ref_strand="+" ref_description="SGN-E735258 [LB14DD10]">
      <seq>ggatgtcgctcggaatttcgcttcaatggcaactcccctccgttatcaggagtactacaacctcggcagctcaacgtacgaccgatgtctttctgtcgtttcctacggttcattccggtcgtgctcttcagagctcggccattcccagtagctcaattgctaccggcaaacgggatggacggttaagatcccttcgttgtctatctgctctggatcctaacttgaagtctacgctggataaggttgtcacatcacaaaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggattgaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgttgtagaagcatacaagagcggagagttgcaagaattgctagaaaggacattgtgctcctgatggattcagatgtaataagcccattattaaattgtatggactatcaggtgtctgttgttcttactgcagatgatgaaaatattttactatgtttatttcctcttcaaggactgaactttaagatatgaatacatcttggaagatgtggttttcaattgcatctacttagtaatcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="100104" stop="104520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100404" g_stop="100610" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="207" r_length="207" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101697" g_stop="101966" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="208" r_stop="477" r_length="270" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103990" g_stop="104229" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="478" r_stop="717" r_length="240" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E735258" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>717</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E735258" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100404" e_stop="100610"/>
          <exon e_start="101697" e_stop="101966"/>
          <exon e_start="103990" e_stop="104229"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATGTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTGGTAAAATTTAATTTCGCATCATCATATATTCCAACTTATAGGGTTTTCAATCGTTCTGTGCTTATTTCTTCCACTGCAATTATTTTAGTACTACTTTCTCTGATTGAAGGACGGAGAAATCTAAACTTTTTTATGGTGTTGGACGTAATTGCTTTCTGCTACGTTAATTAGTTGTATATTAATGCATTTTCTGTTAGTAGTAAGTTATACTATCAGTTTATTGTCATGTCTAAATTATGTTTCTTAAGCAGAATTCGGGGTTGTTTCATTTGACGAAAAAGTGAATCTTTAGATTCAAATTTAGCTGTCTATGATGTAATTCTTATCCTTATTGCAAATTGCAAACAGAGTAAATAGCTGAGTAAGTAAGTTACCCATTATTTTAAGCATCTATCATAGTAGGCCAAGATCCCAAGTAGAAATACTTGGCCAGTTAGACTTAAGTTCTTACCAGTCCTCTATGGGGAGCTTAGTCTCCTAGGTGGAGAGAAAGTTTAAAGTTTTGTGCAAGGTATGTTAGATATGAATAAGTTTGTTGATAGTCTATTTGGTGGTAGAAGCTCACTTAGAATGAAAGACCCTTAATTGCTAGCCGGAGCAATTAATGAGGCAAGACTTAGAGGGAAAAGATCGTATTTGAGGATATTGCAAGTCTATTATGTTGGCATTCTTTGTCGTTACTTAGAAAAGTTGTGATGGCAAGGATGGACTTGTTGAAATAGAAATCTTTGGTAAATTACATCCTATCAATCAGGCTTTTGAAGAATGGATGTTTGCTTGATGGTTTTAAGTAAAGGATACATATAACTGTACTATCTATCAATTTATGCCTACAAAAGAGTGTCAGAGAAATCTTCCCCCAACCTTATGGCTACTCCAGGTTGTGTGCATCTATGTTCTTGTGATGTTATGTTATACAGGGCGTCCTTTTGCTCATTTTGTGTTTATTTATCATTGCATATTTATATATTTCTCTTATTATGCTTGGAATGTACAACTTATGTTTTCATTTAAGAATAGCCGAGGTAGTAAGTCACTCATCTAAGAATTGCTGACATGTGTTTTATTCACTTTCATGTCTTGTAGCTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAGGTAGGTATACAAATTGATACTTCAATATGCATCAGAACTTTTGAATTATTTGCACCCCTCGACTCTTTATGTGTACCTGCTACCTCCCACCAACACAGTTACAAGTAACTTTGCCCATCAAAGTTGAGGTAGATGGGAAGAGATCATCTAGTGTCTTTTGTGTTTGCCTGGATTCTAATCTTGGTCCCTAAGAACAGTTTTTTGTGTTTTTAGGTTATGTTACCAAACTGGAAGGTGTAGTACATGGTTTATACTTCCTTAGTTGTTTACTATGTTGATGAACTACTGTCAAGTTGAAGTTTTGTTCTTAATATGGTGAATCATCATAACTCTTGAAATTGGGGATTGAGCACTTTGTTGCTGAGAAGAACTGGTATAACTACCATAAATAACTTGGACAGAATGTAGAATTCTCTGTACTCAGTAGTCAATTCAACCTCCTACACCACATAGTTCACCTTGTCGATCATATCTTCTCTTCCCCAAACACGCAACTGCTAAGCTGATCCTTTTTTCCATTCGTTCACATCCTTTGAAGTCTTTAACTGGTTTTTTTAATACCAAGAAATCTGTCTGGATCCTGCCCTTTGGACCAACTGCGGCCTTTGAAAAATGGGGATAGTGGGCCAACCTTAAAATGGCTTCTCTTTTCAATTTTTTTTTAAAAATGTGATGGGTAAGAAAATCTTTGCTACCTCTTGAGTCTTGCATCTAGATTGCTAACCCTATTGTACTTTTATCAAATTGCTCTCTTATTGCCAAGTTCCTCAATGTAAGGTCCCTAATTAGTAATATCTATAAGTTGACTCTATATGAGAACACAACAAAGGGATTGTATCCCAAATGTTCCCTAACTGCCTTTCTAATTAGGAAGGTTTTCCATATGGATGGGCATTCAAGAATTGTCTAGATATGACCTGATTCATTGCAGACATCCAAAGAAAACATATTCTAGATATCTTTGGCTGCCTCATAGTGTAGAAAAAGCTGTTTACTGATTTTGCTCATGGAATGCACATGTAGTTGCCGCTGCTCCACATATTCGCCCTTTTGTTGTTTGATAATCTTGAGTTATTACAAGTTCCATACTATTGTCCACCCAAAGAAGGCTACTTTTATGGCAGATTTTGTCTTCCGGATGAACTTCCACGGAGGTTCAACATTTACCGTCCTGCCTCAATAGTGTACACCGATTAAATGGAAAAGGATTTCACTGGGAAAGACTACCTTTTCCTTCTGTCAAGATCAGTCTGTTAGGTTCCGAGTTTATGACTTAGATCAGTGACAAGTAAAAGTGAAAATCTATTTTTGGAATAGTGGACAAGTAATAGTGAAAATCTATTTTGGAATAGTGGACAAATAATAGTGAACAGAGTACTTTTTTTTATTTTTACATAGTTACATTGAGTTCACACCTTCCAGTTATAGTTATCCTCGTTGAAAATGTAAATGACTTTGTTTGGCACTTGTTGCTAGATAGTAGATTGTTACTCCTTGGATCAAATGATCAGTTCACACGGGTTTAAGCTACTCGTAGAAAAGTTAATAGAAAAAATATGTATCATGAACAAGACTTTATATTTTACACCATCTGTTTCAATGTATGTGAAACTCTTTCCATTTTGGGGATATTCTAAAATGTTTGACATGCTTCCTCCTATATTATTACTTTATACATCTTTTGTGAATCTTAATTCATTTAACTATTCAAATCTTAAACTTTGATGTGATCCATACTAAAATTTCAAACACAATTACTGTTATTATACCTAAGTTAAAGCAACATCCTGAACTCCGTATCTAGTACTGTCTATTCAAGCTTGCAACCAGATGCTAGACAAGACATGAACTTCACACCTCTTGCTGTGTCTAGATTAAGTTTTTTGGAATTTACTTCAGCCTTCATCTCTTCATCTCGAAGACAATTTTGAGCACTGAATGCAATTGCTGTCATCATGGTTCGTGCCAAGTTTTGATTCATACTGAATGGAGACTAACAAGTTGCATTGTTTTATTATTACAGAAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAGATGTGGTTTTCAATTGCATCTACTTAGTAATCATTGCAGAGT</genome_strand>
        <mrna_strand>GGATGTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAGATGTGGTTTTCAATTGCATCTACTTAGTAATCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E346081" ref_strand="+" ref_description="SGN-E346081 [cTOF-24-L2]">
      <seq>gatgtcgctcggaatttcgcttcaatggcaactcccctccgttatcaggagtactacaacctcggcagctcaacgtacgaccgatgtctttctgtcgtttcctacggttcattccggtcgtgctcttcagagctcggccattcccagtagctcaattgctaccggcaaacgggatggacggttaagatcccttcgttgtctatctgctctggatcctaacttgaagtctacgctggataaggttgtcacatcacaaaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggattgaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgttgtagaagcatacaagagcggagagttgcaagaattgctagaaaggacattgtgctcctgatggattcagatgtaataagcccattattaaattgtatggacctatcaggtgtctgttgttcttactgcagatgatgaaaatattntactatgttttatttcctcttcaagactgaactttaagatatgaatacatcttggaagaatgtggttttcaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="100105" stop="104500"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100405" g_stop="100610" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="206" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101697" g_stop="101966" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="476" r_length="270" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103990" g_stop="104206" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="695" r_length="219" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E346081" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E346081" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100405" e_stop="100610"/>
          <exon e_start="101697" e_stop="101966"/>
          <exon e_start="103990" e_stop="104206"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTGGTAAAATTTAATTTCGCATCATCATATATTCCAACTTATAGGGTTTTCAATCGTTCTGTGCTTATTTCTTCCACTGCAATTATTTTAGTACTACTTTCTCTGATTGAAGGACGGAGAAATCTAAACTTTTTTATGGTGTTGGACGTAATTGCTTTCTGCTACGTTAATTAGTTGTATATTAATGCATTTTCTGTTAGTAGTAAGTTATACTATCAGTTTATTGTCATGTCTAAATTATGTTTCTTAAGCAGAATTCGGGGTTGTTTCATTTGACGAAAAAGTGAATCTTTAGATTCAAATTTAGCTGTCTATGATGTAATTCTTATCCTTATTGCAAATTGCAAACAGAGTAAATAGCTGAGTAAGTAAGTTACCCATTATTTTAAGCATCTATCATAGTAGGCCAAGATCCCAAGTAGAAATACTTGGCCAGTTAGACTTAAGTTCTTACCAGTCCTCTATGGGGAGCTTAGTCTCCTAGGTGGAGAGAAAGTTTAAAGTTTTGTGCAAGGTATGTTAGATATGAATAAGTTTGTTGATAGTCTATTTGGTGGTAGAAGCTCACTTAGAATGAAAGACCCTTAATTGCTAGCCGGAGCAATTAATGAGGCAAGACTTAGAGGGAAAAGATCGTATTTGAGGATATTGCAAGTCTATTATGTTGGCATTCTTTGTCGTTACTTAGAAAAGTTGTGATGGCAAGGATGGACTTGTTGAAATAGAAATCTTTGGTAAATTACATCCTATCAATCAGGCTTTTGAAGAATGGATGTTTGCTTGATGGTTTTAAGTAAAGGATACATATAACTGTACTATCTATCAATTTATGCCTACAAAAGAGTGTCAGAGAAATCTTCCCCCAACCTTATGGCTACTCCAGGTTGTGTGCATCTATGTTCTTGTGATGTTATGTTATACAGGGCGTCCTTTTGCTCATTTTGTGTTTATTTATCATTGCATATTTATATATTTCTCTTATTATGCTTGGAATGTACAACTTATGTTTTCATTTAAGAATAGCCGAGGTAGTAAGTCACTCATCTAAGAATTGCTGACATGTGTTTTATTCACTTTCATGTCTTGTAGCTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAGGTAGGTATACAAATTGATACTTCAATATGCATCAGAACTTTTGAATTATTTGCACCCCTCGACTCTTTATGTGTACCTGCTACCTCCCACCAACACAGTTACAAGTAACTTTGCCCATCAAAGTTGAGGTAGATGGGAAGAGATCATCTAGTGTCTTTTGTGTTTGCCTGGATTCTAATCTTGGTCCCTAAGAACAGTTTTTTGTGTTTTTAGGTTATGTTACCAAACTGGAAGGTGTAGTACATGGTTTATACTTCCTTAGTTGTTTACTATGTTGATGAACTACTGTCAAGTTGAAGTTTTGTTCTTAATATGGTGAATCATCATAACTCTTGAAATTGGGGATTGAGCACTTTGTTGCTGAGAAGAACTGGTATAACTACCATAAATAACTTGGACAGAATGTAGAATTCTCTGTACTCAGTAGTCAATTCAACCTCCTACACCACATAGTTCACCTTGTCGATCATATCTTCTCTTCCCCAAACACGCAACTGCTAAGCTGATCCTTTTTTCCATTCGTTCACATCCTTTGAAGTCTTTAACTGGTTTTTTTAATACCAAGAAATCTGTCTGGATCCTGCCCTTTGGACCAACTGCGGCCTTTGAAAAATGGGGATAGTGGGCCAACCTTAAAATGGCTTCTCTTTTCAATTTTTTTTTAAAAATGTGATGGGTAAGAAAATCTTTGCTACCTCTTGAGTCTTGCATCTAGATTGCTAACCCTATTGTACTTTTATCAAATTGCTCTCTTATTGCCAAGTTCCTCAATGTAAGGTCCCTAATTAGTAATATCTATAAGTTGACTCTATATGAGAACACAACAAAGGGATTGTATCCCAAATGTTCCCTAACTGCCTTTCTAATTAGGAAGGTTTTCCATATGGATGGGCATTCAAGAATTGTCTAGATATGACCTGATTCATTGCAGACATCCAAAGAAAACATATTCTAGATATCTTTGGCTGCCTCATAGTGTAGAAAAAGCTGTTTACTGATTTTGCTCATGGAATGCACATGTAGTTGCCGCTGCTCCACATATTCGCCCTTTTGTTGTTTGATAATCTTGAGTTATTACAAGTTCCATACTATTGTCCACCCAAAGAAGGCTACTTTTATGGCAGATTTTGTCTTCCGGATGAACTTCCACGGAGGTTCAACATTTACCGTCCTGCCTCAATAGTGTACACCGATTAAATGGAAAAGGATTTCACTGGGAAAGACTACCTTTTCCTTCTGTCAAGATCAGTCTGTTAGGTTCCGAGTTTATGACTTAGATCAGTGACAAGTAAAAGTGAAAATCTATTTTTGGAATAGTGGACAAGTAATAGTGAAAATCTATTTTGGAATAGTGGACAAATAATAGTGAACAGAGTACTTTTTTTTATTTTTACATAGTTACATTGAGTTCACACCTTCCAGTTATAGTTATCCTCGTTGAAAATGTAAATGACTTTGTTTGGCACTTGTTGCTAGATAGTAGATTGTTACTCCTTGGATCAAATGATCAGTTCACACGGGTTTAAGCTACTCGTAGAAAAGTTAATAGAAAAAATATGTATCATGAACAAGACTTTATATTTTACACCATCTGTTTCAATGTATGTGAAACTCTTTCCATTTTGGGGATATTCTAAAATGTTTGACATGCTTCCTCCTATATTATTACTTTATACATCTTTTGTGAATCTTAATTCATTTAACTATTCAAATCTTAAACTTTGATGTGATCCATACTAAAATTTCAAACACAATTACTGTTATTATACCTAAGTTAAAGCAACATCCTGAACTCCGTATCTAGTACTGTCTATTCAAGCTTGCAACCAGATGCTAGACAAGACATGAACTTCACACCTCTTGCTGTGTCTAGATTAAGTTTTTTGGAATTTACTTCAGCCTTCATCTCTTCATCTCGAAGACAATTTTGAGCACTGAATGCAATTGCTGTCATCATGGTTCGTGCCAAGTTTTGATTCATACTGAATGGAGACTAACAAGTTGCATTGTTTTATTATTACAGAAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGA-CTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATG-TTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAG-ATGTGGTTTTCAATTGCAT</genome_strand>
        <mrna_strand>GATGTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACCTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTNTACTATGTTTTATTTCCTCTTCAA-GACTGAACTTTAAGATATGAATACATCTTGGAAGAATGTGGTTTTCAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E290815" ref_strand="+" ref_description="SGN-E290815 [cLET-10-C20]">
      <seq>gatgtcgctcggaatttcgcttcaatggcaactcccctccgttatcaggagtactacaacctcggcagctcaacgtacgaccgatgtctttctgtcgtttcctacggttcattccggtcgtgctcttcagagctcggccattcccagtagctcaattgctaccggcaaacgggatggacggttaagatcccttcgttgtctatctgctctggatcctaacttgaagtctacgctggataaggttgtcacatcacaaaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggattgaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgttgtagaagcatacaagagcggagagttgcaagaattgctagaaaggacattgtgctcctgatggattcagatgtaataagcccattattaaattgtatggacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="100105" stop="104388"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100405" g_stop="100610" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="206" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101697" g_stop="101966" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="476" r_length="270" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103990" g_stop="104088" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="575" r_length="99" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E290815" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E290815" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100405" e_stop="100610"/>
          <exon e_start="101697" e_stop="101966"/>
          <exon e_start="103990" e_stop="104088"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTGGTAAAATTTAATTTCGCATCATCATATATTCCAACTTATAGGGTTTTCAATCGTTCTGTGCTTATTTCTTCCACTGCAATTATTTTAGTACTACTTTCTCTGATTGAAGGACGGAGAAATCTAAACTTTTTTATGGTGTTGGACGTAATTGCTTTCTGCTACGTTAATTAGTTGTATATTAATGCATTTTCTGTTAGTAGTAAGTTATACTATCAGTTTATTGTCATGTCTAAATTATGTTTCTTAAGCAGAATTCGGGGTTGTTTCATTTGACGAAAAAGTGAATCTTTAGATTCAAATTTAGCTGTCTATGATGTAATTCTTATCCTTATTGCAAATTGCAAACAGAGTAAATAGCTGAGTAAGTAAGTTACCCATTATTTTAAGCATCTATCATAGTAGGCCAAGATCCCAAGTAGAAATACTTGGCCAGTTAGACTTAAGTTCTTACCAGTCCTCTATGGGGAGCTTAGTCTCCTAGGTGGAGAGAAAGTTTAAAGTTTTGTGCAAGGTATGTTAGATATGAATAAGTTTGTTGATAGTCTATTTGGTGGTAGAAGCTCACTTAGAATGAAAGACCCTTAATTGCTAGCCGGAGCAATTAATGAGGCAAGACTTAGAGGGAAAAGATCGTATTTGAGGATATTGCAAGTCTATTATGTTGGCATTCTTTGTCGTTACTTAGAAAAGTTGTGATGGCAAGGATGGACTTGTTGAAATAGAAATCTTTGGTAAATTACATCCTATCAATCAGGCTTTTGAAGAATGGATGTTTGCTTGATGGTTTTAAGTAAAGGATACATATAACTGTACTATCTATCAATTTATGCCTACAAAAGAGTGTCAGAGAAATCTTCCCCCAACCTTATGGCTACTCCAGGTTGTGTGCATCTATGTTCTTGTGATGTTATGTTATACAGGGCGTCCTTTTGCTCATTTTGTGTTTATTTATCATTGCATATTTATATATTTCTCTTATTATGCTTGGAATGTACAACTTATGTTTTCATTTAAGAATAGCCGAGGTAGTAAGTCACTCATCTAAGAATTGCTGACATGTGTTTTATTCACTTTCATGTCTTGTAGCTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAGGTAGGTATACAAATTGATACTTCAATATGCATCAGAACTTTTGAATTATTTGCACCCCTCGACTCTTTATGTGTACCTGCTACCTCCCACCAACACAGTTACAAGTAACTTTGCCCATCAAAGTTGAGGTAGATGGGAAGAGATCATCTAGTGTCTTTTGTGTTTGCCTGGATTCTAATCTTGGTCCCTAAGAACAGTTTTTTGTGTTTTTAGGTTATGTTACCAAACTGGAAGGTGTAGTACATGGTTTATACTTCCTTAGTTGTTTACTATGTTGATGAACTACTGTCAAGTTGAAGTTTTGTTCTTAATATGGTGAATCATCATAACTCTTGAAATTGGGGATTGAGCACTTTGTTGCTGAGAAGAACTGGTATAACTACCATAAATAACTTGGACAGAATGTAGAATTCTCTGTACTCAGTAGTCAATTCAACCTCCTACACCACATAGTTCACCTTGTCGATCATATCTTCTCTTCCCCAAACACGCAACTGCTAAGCTGATCCTTTTTTCCATTCGTTCACATCCTTTGAAGTCTTTAACTGGTTTTTTTAATACCAAGAAATCTGTCTGGATCCTGCCCTTTGGACCAACTGCGGCCTTTGAAAAATGGGGATAGTGGGCCAACCTTAAAATGGCTTCTCTTTTCAATTTTTTTTTAAAAATGTGATGGGTAAGAAAATCTTTGCTACCTCTTGAGTCTTGCATCTAGATTGCTAACCCTATTGTACTTTTATCAAATTGCTCTCTTATTGCCAAGTTCCTCAATGTAAGGTCCCTAATTAGTAATATCTATAAGTTGACTCTATATGAGAACACAACAAAGGGATTGTATCCCAAATGTTCCCTAACTGCCTTTCTAATTAGGAAGGTTTTCCATATGGATGGGCATTCAAGAATTGTCTAGATATGACCTGATTCATTGCAGACATCCAAAGAAAACATATTCTAGATATCTTTGGCTGCCTCATAGTGTAGAAAAAGCTGTTTACTGATTTTGCTCATGGAATGCACATGTAGTTGCCGCTGCTCCACATATTCGCCCTTTTGTTGTTTGATAATCTTGAGTTATTACAAGTTCCATACTATTGTCCACCCAAAGAAGGCTACTTTTATGGCAGATTTTGTCTTCCGGATGAACTTCCACGGAGGTTCAACATTTACCGTCCTGCCTCAATAGTGTACACCGATTAAATGGAAAAGGATTTCACTGGGAAAGACTACCTTTTCCTTCTGTCAAGATCAGTCTGTTAGGTTCCGAGTTTATGACTTAGATCAGTGACAAGTAAAAGTGAAAATCTATTTTTGGAATAGTGGACAAGTAATAGTGAAAATCTATTTTGGAATAGTGGACAAATAATAGTGAACAGAGTACTTTTTTTTATTTTTACATAGTTACATTGAGTTCACACCTTCCAGTTATAGTTATCCTCGTTGAAAATGTAAATGACTTTGTTTGGCACTTGTTGCTAGATAGTAGATTGTTACTCCTTGGATCAAATGATCAGTTCACACGGGTTTAAGCTACTCGTAGAAAAGTTAATAGAAAAAATATGTATCATGAACAAGACTTTATATTTTACACCATCTGTTTCAATGTATGTGAAACTCTTTCCATTTTGGGGATATTCTAAAATGTTTGACATGCTTCCTCCTATATTATTACTTTATACATCTTTTGTGAATCTTAATTCATTTAACTATTCAAATCTTAAACTTTGATGTGATCCATACTAAAATTTCAAACACAATTACTGTTATTATACCTAAGTTAAAGCAACATCCTGAACTCCGTATCTAGTACTGTCTATTCAAGCTTGCAACCAGATGCTAGACAAGACATGAACTTCACACCTCTTGCTGTGTCTAGATTAAGTTTTTTGGAATTTACTTCAGCCTTCATCTCTTCATCTCGAAGACAATTTTGAGCACTGAATGCAATTGCTGTCATCATGGTTCGTGCCAAGTTTTGATTCATACTGAATGGAGACTAACAAGTTGCATTGTTTTATTATTACAGAAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTA</genome_strand>
        <mrna_strand>GATGTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E716924" ref_strand="+" ref_description="SGN-E716924 [FB18BG03]">
      <seq>gtcgctcggaatttcgcttcaatggcaactcccctccgttatcaggagtactacaacctcggcagctcaacgtacgaccgatgtctttctgtcgtttcctacggttcattccggtcgtgctcttcagagctcggccattcccagtagctcaattgctaccggcaaacgggatggacggttaagatcccttcgttgtctatctgctctggatcctaacttgaagtctacgctggataaggttgtcacatcacaaaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggattgaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgttgtagaagcatacaagagcggagagttgcaagaattgctagaaaggacattgtgctcctgatggattcagatgtaataagcccattattaaattgtatggactatcaggtgtctgttgttcttactgcagatgatgaaaatattttactatgtttatttcctcttcaaggactgaactttaagatatgaatacatcttggaagatgtggttttcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="100108" stop="104500"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100408" g_stop="100610" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="203" r_length="203" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101697" g_stop="101966" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="204" r_stop="473" r_length="270" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103990" g_stop="104200" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="474" r_stop="684" r_length="211" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E716924" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>684</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E716924" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100408" e_stop="100610"/>
          <exon e_start="101697" e_stop="101966"/>
          <exon e_start="103990" e_stop="104200"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTGGTAAAATTTAATTTCGCATCATCATATATTCCAACTTATAGGGTTTTCAATCGTTCTGTGCTTATTTCTTCCACTGCAATTATTTTAGTACTACTTTCTCTGATTGAAGGACGGAGAAATCTAAACTTTTTTATGGTGTTGGACGTAATTGCTTTCTGCTACGTTAATTAGTTGTATATTAATGCATTTTCTGTTAGTAGTAAGTTATACTATCAGTTTATTGTCATGTCTAAATTATGTTTCTTAAGCAGAATTCGGGGTTGTTTCATTTGACGAAAAAGTGAATCTTTAGATTCAAATTTAGCTGTCTATGATGTAATTCTTATCCTTATTGCAAATTGCAAACAGAGTAAATAGCTGAGTAAGTAAGTTACCCATTATTTTAAGCATCTATCATAGTAGGCCAAGATCCCAAGTAGAAATACTTGGCCAGTTAGACTTAAGTTCTTACCAGTCCTCTATGGGGAGCTTAGTCTCCTAGGTGGAGAGAAAGTTTAAAGTTTTGTGCAAGGTATGTTAGATATGAATAAGTTTGTTGATAGTCTATTTGGTGGTAGAAGCTCACTTAGAATGAAAGACCCTTAATTGCTAGCCGGAGCAATTAATGAGGCAAGACTTAGAGGGAAAAGATCGTATTTGAGGATATTGCAAGTCTATTATGTTGGCATTCTTTGTCGTTACTTAGAAAAGTTGTGATGGCAAGGATGGACTTGTTGAAATAGAAATCTTTGGTAAATTACATCCTATCAATCAGGCTTTTGAAGAATGGATGTTTGCTTGATGGTTTTAAGTAAAGGATACATATAACTGTACTATCTATCAATTTATGCCTACAAAAGAGTGTCAGAGAAATCTTCCCCCAACCTTATGGCTACTCCAGGTTGTGTGCATCTATGTTCTTGTGATGTTATGTTATACAGGGCGTCCTTTTGCTCATTTTGTGTTTATTTATCATTGCATATTTATATATTTCTCTTATTATGCTTGGAATGTACAACTTATGTTTTCATTTAAGAATAGCCGAGGTAGTAAGTCACTCATCTAAGAATTGCTGACATGTGTTTTATTCACTTTCATGTCTTGTAGCTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAGGTAGGTATACAAATTGATACTTCAATATGCATCAGAACTTTTGAATTATTTGCACCCCTCGACTCTTTATGTGTACCTGCTACCTCCCACCAACACAGTTACAAGTAACTTTGCCCATCAAAGTTGAGGTAGATGGGAAGAGATCATCTAGTGTCTTTTGTGTTTGCCTGGATTCTAATCTTGGTCCCTAAGAACAGTTTTTTGTGTTTTTAGGTTATGTTACCAAACTGGAAGGTGTAGTACATGGTTTATACTTCCTTAGTTGTTTACTATGTTGATGAACTACTGTCAAGTTGAAGTTTTGTTCTTAATATGGTGAATCATCATAACTCTTGAAATTGGGGATTGAGCACTTTGTTGCTGAGAAGAACTGGTATAACTACCATAAATAACTTGGACAGAATGTAGAATTCTCTGTACTCAGTAGTCAATTCAACCTCCTACACCACATAGTTCACCTTGTCGATCATATCTTCTCTTCCCCAAACACGCAACTGCTAAGCTGATCCTTTTTTCCATTCGTTCACATCCTTTGAAGTCTTTAACTGGTTTTTTTAATACCAAGAAATCTGTCTGGATCCTGCCCTTTGGACCAACTGCGGCCTTTGAAAAATGGGGATAGTGGGCCAACCTTAAAATGGCTTCTCTTTTCAATTTTTTTTTAAAAATGTGATGGGTAAGAAAATCTTTGCTACCTCTTGAGTCTTGCATCTAGATTGCTAACCCTATTGTACTTTTATCAAATTGCTCTCTTATTGCCAAGTTCCTCAATGTAAGGTCCCTAATTAGTAATATCTATAAGTTGACTCTATATGAGAACACAACAAAGGGATTGTATCCCAAATGTTCCCTAACTGCCTTTCTAATTAGGAAGGTTTTCCATATGGATGGGCATTCAAGAATTGTCTAGATATGACCTGATTCATTGCAGACATCCAAAGAAAACATATTCTAGATATCTTTGGCTGCCTCATAGTGTAGAAAAAGCTGTTTACTGATTTTGCTCATGGAATGCACATGTAGTTGCCGCTGCTCCACATATTCGCCCTTTTGTTGTTTGATAATCTTGAGTTATTACAAGTTCCATACTATTGTCCACCCAAAGAAGGCTACTTTTATGGCAGATTTTGTCTTCCGGATGAACTTCCACGGAGGTTCAACATTTACCGTCCTGCCTCAATAGTGTACACCGATTAAATGGAAAAGGATTTCACTGGGAAAGACTACCTTTTCCTTCTGTCAAGATCAGTCTGTTAGGTTCCGAGTTTATGACTTAGATCAGTGACAAGTAAAAGTGAAAATCTATTTTTGGAATAGTGGACAAGTAATAGTGAAAATCTATTTTGGAATAGTGGACAAATAATAGTGAACAGAGTACTTTTTTTTATTTTTACATAGTTACATTGAGTTCACACCTTCCAGTTATAGTTATCCTCGTTGAAAATGTAAATGACTTTGTTTGGCACTTGTTGCTAGATAGTAGATTGTTACTCCTTGGATCAAATGATCAGTTCACACGGGTTTAAGCTACTCGTAGAAAAGTTAATAGAAAAAATATGTATCATGAACAAGACTTTATATTTTACACCATCTGTTTCAATGTATGTGAAACTCTTTCCATTTTGGGGATATTCTAAAATGTTTGACATGCTTCCTCCTATATTATTACTTTATACATCTTTTGTGAATCTTAATTCATTTAACTATTCAAATCTTAAACTTTGATGTGATCCATACTAAAATTTCAAACACAATTACTGTTATTATACCTAAGTTAAAGCAACATCCTGAACTCCGTATCTAGTACTGTCTATTCAAGCTTGCAACCAGATGCTAGACAAGACATGAACTTCACACCTCTTGCTGTGTCTAGATTAAGTTTTTTGGAATTTACTTCAGCCTTCATCTCTTCATCTCGAAGACAATTTTGAGCACTGAATGCAATTGCTGTCATCATGGTTCGTGCCAAGTTTTGATTCATACTGAATGGAGACTAACAAGTTGCATTGTTTTATTATTACAGAAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAGATGTGGTTTTCAA</genome_strand>
        <mrna_strand>GTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAGATGTGGTTTTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E312439" ref_strand="+" ref_description="SGN-E312439 [cLEZ-20-G20]">
      <seq>tcgctcggaatttcgcttcaatggcaactcccctccgttatcaggagtactacaacctcggcagctcaacgtacgaccgatgtctttctgtcgtttcctacggttcattccggtcgtgcctcttcagagctcggccattcccagtagctcaattgctaccggcaaacgggatggacggttaagatcccttcgttgtctatctgctctggatcctaacttgaagtctacgctggataaggttgtcacatcacaaaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggattgaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgttgtagaagcatacaagagccggagagttgcaagaaattgctagaaagggaccattgtgctcctgatnggattcagatgtnaataagcccattattaaattgtatggactatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="100109" stop="104390"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100409" g_stop="100610" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="203" r_length="203" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101697" g_stop="101966" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="204" r_stop="473" r_length="270" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.83"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103990" g_stop="104090" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="474" r_stop="580" r_length="107" r_score="0.881"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E312439" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E312439" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100409" e_stop="100610"/>
          <exon e_start="101697" e_stop="101966"/>
          <exon e_start="103990" e_stop="104090"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTG-CTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTGGTAAAATTTAATTTCGCATCATCATATATTCCAACTTATAGGGTTTTCAATCGTTCTGTGCTTATTTCTTCCACTGCAATTATTTTAGTACTACTTTCTCTGATTGAAGGACGGAGAAATCTAAACTTTTTTATGGTGTTGGACGTAATTGCTTTCTGCTACGTTAATTAGTTGTATATTAATGCATTTTCTGTTAGTAGTAAGTTATACTATCAGTTTATTGTCATGTCTAAATTATGTTTCTTAAGCAGAATTCGGGGTTGTTTCATTTGACGAAAAAGTGAATCTTTAGATTCAAATTTAGCTGTCTATGATGTAATTCTTATCCTTATTGCAAATTGCAAACAGAGTAAATAGCTGAGTAAGTAAGTTACCCATTATTTTAAGCATCTATCATAGTAGGCCAAGATCCCAAGTAGAAATACTTGGCCAGTTAGACTTAAGTTCTTACCAGTCCTCTATGGGGAGCTTAGTCTCCTAGGTGGAGAGAAAGTTTAAAGTTTTGTGCAAGGTATGTTAGATATGAATAAGTTTGTTGATAGTCTATTTGGTGGTAGAAGCTCACTTAGAATGAAAGACCCTTAATTGCTAGCCGGAGCAATTAATGAGGCAAGACTTAGAGGGAAAAGATCGTATTTGAGGATATTGCAAGTCTATTATGTTGGCATTCTTTGTCGTTACTTAGAAAAGTTGTGATGGCAAGGATGGACTTGTTGAAATAGAAATCTTTGGTAAATTACATCCTATCAATCAGGCTTTTGAAGAATGGATGTTTGCTTGATGGTTTTAAGTAAAGGATACATATAACTGTACTATCTATCAATTTATGCCTACAAAAGAGTGTCAGAGAAATCTTCCCCCAACCTTATGGCTACTCCAGGTTGTGTGCATCTATGTTCTTGTGATGTTATGTTATACAGGGCGTCCTTTTGCTCATTTTGTGTTTATTTATCATTGCATATTTATATATTTCTCTTATTATGCTTGGAATGTACAACTTATGTTTTCATTTAAGAATAGCCGAGGTAGTAAGTCACTCATCTAAGAATTGCTGACATGTGTTTTATTCACTTTCATGTCTTGTAGCTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAGGTAGGTATACAAATTGATACTTCAATATGCATCAGAACTTTTGAATTATTTGCACCCCTCGACTCTTTATGTGTACCTGCTACCTCCCACCAACACAGTTACAAGTAACTTTGCCCATCAAAGTTGAGGTAGATGGGAAGAGATCATCTAGTGTCTTTTGTGTTTGCCTGGATTCTAATCTTGGTCCCTAAGAACAGTTTTTTGTGTTTTTAGGTTATGTTACCAAACTGGAAGGTGTAGTACATGGTTTATACTTCCTTAGTTGTTTACTATGTTGATGAACTACTGTCAAGTTGAAGTTTTGTTCTTAATATGGTGAATCATCATAACTCTTGAAATTGGGGATTGAGCACTTTGTTGCTGAGAAGAACTGGTATAACTACCATAAATAACTTGGACAGAATGTAGAATTCTCTGTACTCAGTAGTCAATTCAACCTCCTACACCACATAGTTCACCTTGTCGATCATATCTTCTCTTCCCCAAACACGCAACTGCTAAGCTGATCCTTTTTTCCATTCGTTCACATCCTTTGAAGTCTTTAACTGGTTTTTTTAATACCAAGAAATCTGTCTGGATCCTGCCCTTTGGACCAACTGCGGCCTTTGAAAAATGGGGATAGTGGGCCAACCTTAAAATGGCTTCTCTTTTCAATTTTTTTTTAAAAATGTGATGGGTAAGAAAATCTTTGCTACCTCTTGAGTCTTGCATCTAGATTGCTAACCCTATTGTACTTTTATCAAATTGCTCTCTTATTGCCAAGTTCCTCAATGTAAGGTCCCTAATTAGTAATATCTATAAGTTGACTCTATATGAGAACACAACAAAGGGATTGTATCCCAAATGTTCCCTAACTGCCTTTCTAATTAGGAAGGTTTTCCATATGGATGGGCATTCAAGAATTGTCTAGATATGACCTGATTCATTGCAGACATCCAAAGAAAACATATTCTAGATATCTTTGGCTGCCTCATAGTGTAGAAAAAGCTGTTTACTGATTTTGCTCATGGAATGCACATGTAGTTGCCGCTGCTCCACATATTCGCCCTTTTGTTGTTTGATAATCTTGAGTTATTACAAGTTCCATACTATTGTCCACCCAAAGAAGGCTACTTTTATGGCAGATTTTGTCTTCCGGATGAACTTCCACGGAGGTTCAACATTTACCGTCCTGCCTCAATAGTGTACACCGATTAAATGGAAAAGGATTTCACTGGGAAAGACTACCTTTTCCTTCTGTCAAGATCAGTCTGTTAGGTTCCGAGTTTATGACTTAGATCAGTGACAAGTAAAAGTGAAAATCTATTTTTGGAATAGTGGACAAGTAATAGTGAAAATCTATTTTGGAATAGTGGACAAATAATAGTGAACAGAGTACTTTTTTTTATTTTTACATAGTTACATTGAGTTCACACCTTCCAGTTATAGTTATCCTCGTTGAAAATGTAAATGACTTTGTTTGGCACTTGTTGCTAGATAGTAGATTGTTACTCCTTGGATCAAATGATCAGTTCACACGGGTTTAAGCTACTCGTAGAAAAGTTAATAGAAAAAATATGTATCATGAACAAGACTTTATATTTTACACCATCTGTTTCAATGTATGTGAAACTCTTTCCATTTTGGGGATATTCTAAAATGTTTGACATGCTTCCTCCTATATTATTACTTTATACATCTTTTGTGAATCTTAATTCATTTAACTATTCAAATCTTAAACTTTGATGTGATCCATACTAAAATTTCAAACACAATTACTGTTATTATACCTAAGTTAAAGCAACATCCTGAACTCCGTATCTAGTACTGTCTATTCAAGCTTGCAACCAGATGCTAGACAAGACATGAACTTCACACCTCTTGCTGTGTCTAGATTAAGTTTTTTGGAATTTACTTCAGCCTTCATCTCTTCATCTCGAAGACAATTTTGAGCACTGAATGCAATTGCTGTCATCATGGTTCGTGCCAAGTTTTGATTCATACTGAATGGAGACTAACAAGTTGCATTGTTTTATTATTACAGAAGCATACAAGAG-CGGAGAGTTGCAAG-AATTGCTAGAAA-GGA-CATTGTGCTCCTGAT-GGATTCAGATGT-AATAAGCCCATTATTAAATTGTATGGACTATC</genome_strand>
        <mrna_strand>TCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACAAGAGCCGGAGAGTTGCAAGAAATTGCTAGAAAGGGACCATTGTGCTCCTGATNGGATTCAGATGTNAATAAGCCCATTATTAAATTGTATGGACTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E299125" ref_strand="+" ref_description="SGN-E299125 [cLET-42-F11]">
      <seq>ggaatttcgctccaatggcaactcccctccgttatcaggagtactacaacctcggcagctcaacgtacgaccgatgtctttctgtcgtttcctacggttcattccggtcgtgctcttcagagctcggccattcccagtagctcaattgctaccggcaaacgggatggacggttaagatcccttcgttgtctatctgctctggatcctaacttgaagtctacgctggataaggttgtcacatcacagaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggattgaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="100115" stop="102261"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100415" g_stop="100610" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="196" r_length="196" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101697" g_stop="101961" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="461" r_length="265" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E299125" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E299125" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100415" e_stop="100610"/>
          <exon e_start="101697" e_stop="101961"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTGGTAAAATTTAATTTCGCATCATCATATATTCCAACTTATAGGGTTTTCAATCGTTCTGTGCTTATTTCTTCCACTGCAATTATTTTAGTACTACTTTCTCTGATTGAAGGACGGAGAAATCTAAACTTTTTTATGGTGTTGGACGTAATTGCTTTCTGCTACGTTAATTAGTTGTATATTAATGCATTTTCTGTTAGTAGTAAGTTATACTATCAGTTTATTGTCATGTCTAAATTATGTTTCTTAAGCAGAATTCGGGGTTGTTTCATTTGACGAAAAAGTGAATCTTTAGATTCAAATTTAGCTGTCTATGATGTAATTCTTATCCTTATTGCAAATTGCAAACAGAGTAAATAGCTGAGTAAGTAAGTTACCCATTATTTTAAGCATCTATCATAGTAGGCCAAGATCCCAAGTAGAAATACTTGGCCAGTTAGACTTAAGTTCTTACCAGTCCTCTATGGGGAGCTTAGTCTCCTAGGTGGAGAGAAAGTTTAAAGTTTTGTGCAAGGTATGTTAGATATGAATAAGTTTGTTGATAGTCTATTTGGTGGTAGAAGCTCACTTAGAATGAAAGACCCTTAATTGCTAGCCGGAGCAATTAATGAGGCAAGACTTAGAGGGAAAAGATCGTATTTGAGGATATTGCAAGTCTATTATGTTGGCATTCTTTGTCGTTACTTAGAAAAGTTGTGATGGCAAGGATGGACTTGTTGAAATAGAAATCTTTGGTAAATTACATCCTATCAATCAGGCTTTTGAAGAATGGATGTTTGCTTGATGGTTTTAAGTAAAGGATACATATAACTGTACTATCTATCAATTTATGCCTACAAAAGAGTGTCAGAGAAATCTTCCCCCAACCTTATGGCTACTCCAGGTTGTGTGCATCTATGTTCTTGTGATGTTATGTTATACAGGGCGTCCTTTTGCTCATTTTGTGTTTATTTATCATTGCATATTTATATATTTCTCTTATTATGCTTGGAATGTACAACTTATGTTTTCATTTAAGAATAGCCGAGGTAGTAAGTCACTCATCTAAGAATTGCTGACATGTGTTTTATTCACTTTCATGTCTTGTAGCTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGT</genome_strand>
        <mrna_strand>GGAATTTCGCTCCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAGAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E541059" ref_strand="+" ref_description="SGN-E541059 [TUS-61-K12]">
      <seq>aatttcgcttcaatggcaactcccctccgttatcaggagtactacaacctcggcagctcaacgtacgaccgatgtctttctgtcgtttcctacggttcattccggtcgtgctcttcagagctcggccattcccagtagctcaattgctaccggcaaacgggatggacggttaagatcccttcgttgtctatctgctctggatcctaacttgaagtctacgctggataaggttgtcacatcacaaaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggattgaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgttgtagaagcatacaagagcggagagttgcaagaattgctagaaaggacattgtgctcctgatggattcagatgtaataagcccattattaaattgtatggactatcaggtgtctgttgttcttactgcagatgatgaaaatattttactatgtttatttcctcttcaaggactgaactttaagatatgaatacatcttggaagatgtggttttnncattgaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="100117" stop="104497"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100417" g_stop="100610" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="194" r_length="194" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101697" g_stop="101966" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="464" r_length="270" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103990" g_stop="104212" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="688" r_length="224" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E541059" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>687</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E541059" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100417" e_stop="100610"/>
          <exon e_start="101697" e_stop="101966"/>
          <exon e_start="103990" e_stop="104212"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTGGTAAAATTTAATTTCGCATCATCATATATTCCAACTTATAGGGTTTTCAATCGTTCTGTGCTTATTTCTTCCACTGCAATTATTTTAGTACTACTTTCTCTGATTGAAGGACGGAGAAATCTAAACTTTTTTATGGTGTTGGACGTAATTGCTTTCTGCTACGTTAATTAGTTGTATATTAATGCATTTTCTGTTAGTAGTAAGTTATACTATCAGTTTATTGTCATGTCTAAATTATGTTTCTTAAGCAGAATTCGGGGTTGTTTCATTTGACGAAAAAGTGAATCTTTAGATTCAAATTTAGCTGTCTATGATGTAATTCTTATCCTTATTGCAAATTGCAAACAGAGTAAATAGCTGAGTAAGTAAGTTACCCATTATTTTAAGCATCTATCATAGTAGGCCAAGATCCCAAGTAGAAATACTTGGCCAGTTAGACTTAAGTTCTTACCAGTCCTCTATGGGGAGCTTAGTCTCCTAGGTGGAGAGAAAGTTTAAAGTTTTGTGCAAGGTATGTTAGATATGAATAAGTTTGTTGATAGTCTATTTGGTGGTAGAAGCTCACTTAGAATGAAAGACCCTTAATTGCTAGCCGGAGCAATTAATGAGGCAAGACTTAGAGGGAAAAGATCGTATTTGAGGATATTGCAAGTCTATTATGTTGGCATTCTTTGTCGTTACTTAGAAAAGTTGTGATGGCAAGGATGGACTTGTTGAAATAGAAATCTTTGGTAAATTACATCCTATCAATCAGGCTTTTGAAGAATGGATGTTTGCTTGATGGTTTTAAGTAAAGGATACATATAACTGTACTATCTATCAATTTATGCCTACAAAAGAGTGTCAGAGAAATCTTCCCCCAACCTTATGGCTACTCCAGGTTGTGTGCATCTATGTTCTTGTGATGTTATGTTATACAGGGCGTCCTTTTGCTCATTTTGTGTTTATTTATCATTGCATATTTATATATTTCTCTTATTATGCTTGGAATGTACAACTTATGTTTTCATTTAAGAATAGCCGAGGTAGTAAGTCACTCATCTAAGAATTGCTGACATGTGTTTTATTCACTTTCATGTCTTGTAGCTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAGGTAGGTATACAAATTGATACTTCAATATGCATCAGAACTTTTGAATTATTTGCACCCCTCGACTCTTTATGTGTACCTGCTACCTCCCACCAACACAGTTACAAGTAACTTTGCCCATCAAAGTTGAGGTAGATGGGAAGAGATCATCTAGTGTCTTTTGTGTTTGCCTGGATTCTAATCTTGGTCCCTAAGAACAGTTTTTTGTGTTTTTAGGTTATGTTACCAAACTGGAAGGTGTAGTACATGGTTTATACTTCCTTAGTTGTTTACTATGTTGATGAACTACTGTCAAGTTGAAGTTTTGTTCTTAATATGGTGAATCATCATAACTCTTGAAATTGGGGATTGAGCACTTTGTTGCTGAGAAGAACTGGTATAACTACCATAAATAACTTGGACAGAATGTAGAATTCTCTGTACTCAGTAGTCAATTCAACCTCCTACACCACATAGTTCACCTTGTCGATCATATCTTCTCTTCCCCAAACACGCAACTGCTAAGCTGATCCTTTTTTCCATTCGTTCACATCCTTTGAAGTCTTTAACTGGTTTTTTTAATACCAAGAAATCTGTCTGGATCCTGCCCTTTGGACCAACTGCGGCCTTTGAAAAATGGGGATAGTGGGCCAACCTTAAAATGGCTTCTCTTTTCAATTTTTTTTTAAAAATGTGATGGGTAAGAAAATCTTTGCTACCTCTTGAGTCTTGCATCTAGATTGCTAACCCTATTGTACTTTTATCAAATTGCTCTCTTATTGCCAAGTTCCTCAATGTAAGGTCCCTAATTAGTAATATCTATAAGTTGACTCTATATGAGAACACAACAAAGGGATTGTATCCCAAATGTTCCCTAACTGCCTTTCTAATTAGGAAGGTTTTCCATATGGATGGGCATTCAAGAATTGTCTAGATATGACCTGATTCATTGCAGACATCCAAAGAAAACATATTCTAGATATCTTTGGCTGCCTCATAGTGTAGAAAAAGCTGTTTACTGATTTTGCTCATGGAATGCACATGTAGTTGCCGCTGCTCCACATATTCGCCCTTTTGTTGTTTGATAATCTTGAGTTATTACAAGTTCCATACTATTGTCCACCCAAAGAAGGCTACTTTTATGGCAGATTTTGTCTTCCGGATGAACTTCCACGGAGGTTCAACATTTACCGTCCTGCCTCAATAGTGTACACCGATTAAATGGAAAAGGATTTCACTGGGAAAGACTACCTTTTCCTTCTGTCAAGATCAGTCTGTTAGGTTCCGAGTTTATGACTTAGATCAGTGACAAGTAAAAGTGAAAATCTATTTTTGGAATAGTGGACAAGTAATAGTGAAAATCTATTTTGGAATAGTGGACAAATAATAGTGAACAGAGTACTTTTTTTTATTTTTACATAGTTACATTGAGTTCACACCTTCCAGTTATAGTTATCCTCGTTGAAAATGTAAATGACTTTGTTTGGCACTTGTTGCTAGATAGTAGATTGTTACTCCTTGGATCAAATGATCAGTTCACACGGGTTTAAGCTACTCGTAGAAAAGTTAATAGAAAAAATATGTATCATGAACAAGACTTTATATTTTACACCATCTGTTTCAATGTATGTGAAACTCTTTCCATTTTGGGGATATTCTAAAATGTTTGACATGCTTCCTCCTATATTATTACTTTATACATCTTTTGTGAATCTTAATTCATTTAACTATTCAAATCTTAAACTTTGATGTGATCCATACTAAAATTTCAAACACAATTACTGTTATTATACCTAAGTTAAAGCAACATCCTGAACTCCGTATCTAGTACTGTCTATTCAAGCTTGCAACCAGATGCTAGACAAGACATGAACTTCACACCTCTTGCTGTGTCTAGATTAAGTTTTTTGGAATTTACTTCAGCCTTCATCTCTTCATCTCGAAGACAATTTTGAGCACTGAATGCAATTGCTGTCATCATGGTTCGTGCCAAGTTTTGATTCATACTGAATGGAGACTAACAAGTTGCATTGTTTTATTATTACAGAAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAGATGTGGTTTTCA-ATTGCATCTACTT</genome_strand>
        <mrna_strand>AATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAGATGTGGTTTTNNCATTGAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E541057" ref_strand="+" ref_description="SGN-E541057 [TUS-61-K12](-)">
      <seq>aatttcgcttcaatggcactccccctccgttatcaggagtactacaaactcggcagctcaacgtacgaccgatgtctttctgtcgtttcctacggttcattccggtcgtgctcttcagagctcggccattcccagtagctcaattgctaccgcaaaacgggatggacggttaagatcccttcgttgtctatctgctctggatcctaacttgaagtctacgctggataaggttgtcacatcacaaaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggattgaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgttgtagaagcatacaagagcggagagttgcaagaattgctagaaaggacattgtgctcctgatggattcagatgtaataagcccattattaaattgtatggactatcaggtgtctgttgttcttactgcagatgatgaaaatattttactatgtttatttcctcttcaaggactgaactttaagatatgaatacatcttggaagatgggttttcaatgaaaaaaagaaaaaaaaaaactcgaggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="100117" stop="104505"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100417" g_stop="100610" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="194" r_length="194" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101697" g_stop="101966" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="464" r_length="270" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103990" g_stop="104199" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="673" r_length="209" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="677" polyA_stop="695"/>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E541057" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>674</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E541057" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100417" e_stop="100610"/>
          <exon e_start="101697" e_stop="101966"/>
          <exon e_start="103990" e_stop="104199"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTGGTAAAATTTAATTTCGCATCATCATATATTCCAACTTATAGGGTTTTCAATCGTTCTGTGCTTATTTCTTCCACTGCAATTATTTTAGTACTACTTTCTCTGATTGAAGGACGGAGAAATCTAAACTTTTTTATGGTGTTGGACGTAATTGCTTTCTGCTACGTTAATTAGTTGTATATTAATGCATTTTCTGTTAGTAGTAAGTTATACTATCAGTTTATTGTCATGTCTAAATTATGTTTCTTAAGCAGAATTCGGGGTTGTTTCATTTGACGAAAAAGTGAATCTTTAGATTCAAATTTAGCTGTCTATGATGTAATTCTTATCCTTATTGCAAATTGCAAACAGAGTAAATAGCTGAGTAAGTAAGTTACCCATTATTTTAAGCATCTATCATAGTAGGCCAAGATCCCAAGTAGAAATACTTGGCCAGTTAGACTTAAGTTCTTACCAGTCCTCTATGGGGAGCTTAGTCTCCTAGGTGGAGAGAAAGTTTAAAGTTTTGTGCAAGGTATGTTAGATATGAATAAGTTTGTTGATAGTCTATTTGGTGGTAGAAGCTCACTTAGAATGAAAGACCCTTAATTGCTAGCCGGAGCAATTAATGAGGCAAGACTTAGAGGGAAAAGATCGTATTTGAGGATATTGCAAGTCTATTATGTTGGCATTCTTTGTCGTTACTTAGAAAAGTTGTGATGGCAAGGATGGACTTGTTGAAATAGAAATCTTTGGTAAATTACATCCTATCAATCAGGCTTTTGAAGAATGGATGTTTGCTTGATGGTTTTAAGTAAAGGATACATATAACTGTACTATCTATCAATTTATGCCTACAAAAGAGTGTCAGAGAAATCTTCCCCCAACCTTATGGCTACTCCAGGTTGTGTGCATCTATGTTCTTGTGATGTTATGTTATACAGGGCGTCCTTTTGCTCATTTTGTGTTTATTTATCATTGCATATTTATATATTTCTCTTATTATGCTTGGAATGTACAACTTATGTTTTCATTTAAGAATAGCCGAGGTAGTAAGTCACTCATCTAAGAATTGCTGACATGTGTTTTATTCACTTTCATGTCTTGTAGCTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAGGTAGGTATACAAATTGATACTTCAATATGCATCAGAACTTTTGAATTATTTGCACCCCTCGACTCTTTATGTGTACCTGCTACCTCCCACCAACACAGTTACAAGTAACTTTGCCCATCAAAGTTGAGGTAGATGGGAAGAGATCATCTAGTGTCTTTTGTGTTTGCCTGGATTCTAATCTTGGTCCCTAAGAACAGTTTTTTGTGTTTTTAGGTTATGTTACCAAACTGGAAGGTGTAGTACATGGTTTATACTTCCTTAGTTGTTTACTATGTTGATGAACTACTGTCAAGTTGAAGTTTTGTTCTTAATATGGTGAATCATCATAACTCTTGAAATTGGGGATTGAGCACTTTGTTGCTGAGAAGAACTGGTATAACTACCATAAATAACTTGGACAGAATGTAGAATTCTCTGTACTCAGTAGTCAATTCAACCTCCTACACCACATAGTTCACCTTGTCGATCATATCTTCTCTTCCCCAAACACGCAACTGCTAAGCTGATCCTTTTTTCCATTCGTTCACATCCTTTGAAGTCTTTAACTGGTTTTTTTAATACCAAGAAATCTGTCTGGATCCTGCCCTTTGGACCAACTGCGGCCTTTGAAAAATGGGGATAGTGGGCCAACCTTAAAATGGCTTCTCTTTTCAATTTTTTTTTAAAAATGTGATGGGTAAGAAAATCTTTGCTACCTCTTGAGTCTTGCATCTAGATTGCTAACCCTATTGTACTTTTATCAAATTGCTCTCTTATTGCCAAGTTCCTCAATGTAAGGTCCCTAATTAGTAATATCTATAAGTTGACTCTATATGAGAACACAACAAAGGGATTGTATCCCAAATGTTCCCTAACTGCCTTTCTAATTAGGAAGGTTTTCCATATGGATGGGCATTCAAGAATTGTCTAGATATGACCTGATTCATTGCAGACATCCAAAGAAAACATATTCTAGATATCTTTGGCTGCCTCATAGTGTAGAAAAAGCTGTTTACTGATTTTGCTCATGGAATGCACATGTAGTTGCCGCTGCTCCACATATTCGCCCTTTTGTTGTTTGATAATCTTGAGTTATTACAAGTTCCATACTATTGTCCACCCAAAGAAGGCTACTTTTATGGCAGATTTTGTCTTCCGGATGAACTTCCACGGAGGTTCAACATTTACCGTCCTGCCTCAATAGTGTACACCGATTAAATGGAAAAGGATTTCACTGGGAAAGACTACCTTTTCCTTCTGTCAAGATCAGTCTGTTAGGTTCCGAGTTTATGACTTAGATCAGTGACAAGTAAAAGTGAAAATCTATTTTTGGAATAGTGGACAAGTAATAGTGAAAATCTATTTTGGAATAGTGGACAAATAATAGTGAACAGAGTACTTTTTTTTATTTTTACATAGTTACATTGAGTTCACACCTTCCAGTTATAGTTATCCTCGTTGAAAATGTAAATGACTTTGTTTGGCACTTGTTGCTAGATAGTAGATTGTTACTCCTTGGATCAAATGATCAGTTCACACGGGTTTAAGCTACTCGTAGAAAAGTTAATAGAAAAAATATGTATCATGAACAAGACTTTATATTTTACACCATCTGTTTCAATGTATGTGAAACTCTTTCCATTTTGGGGATATTCTAAAATGTTTGACATGCTTCCTCCTATATTATTACTTTATACATCTTTTGTGAATCTTAATTCATTTAACTATTCAAATCTTAAACTTTGATGTGATCCATACTAAAATTTCAAACACAATTACTGTTATTATACCTAAGTTAAAGCAACATCCTGAACTCCGTATCTAGTACTGTCTATTCAAGCTTGCAACCAGATGCTAGACAAGACATGAACTTCACACCTCTTGCTGTGTCTAGATTAAGTTTTTTGGAATTTACTTCAGCCTTCATCTCTTCATCTCGAAGACAATTTTGAGCACTGAATGCAATTGCTGTCATCATGGTTCGTGCCAAGTTTTGATTCATACTGAATGGAGACTAACAAGTTGCATTGTTTTATTATTACAGAAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAGATGTGGTTTTCA</genome_strand>
        <mrna_strand>AATTTCGCTTCAATGGCACTCCCCCTCCGTTATCAGGAGTACTACAAACTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGCAAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAGATG-GGTTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E294908" ref_strand="-" ref_description="SGN-E294908 [cLET-17-K5](-)">
      <seq>atttcgcttcaatggcaactcccctccgttatcaggagtactacaacctcggcagctcaacgtacgaccgatgtctttctgtcgtttcctacggttcattccggtcgtgctcttcagagctcggccattcccagtagctcaattgctaccggcaaacgggatggacggttaagatcccttcgttgtctatctgctctggatcctaacttgaagtctacgctggataaggttgtcacatcacaaaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggattgaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgttgtagaagcatacaagagcggagagttgcaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="100118" stop="104318"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100418" g_stop="100610" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="193" r_length="193" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101697" g_stop="101966" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="463" r_length="270" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103990" g_stop="104018" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="492" r_length="29" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E294908" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E294908" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="100418" e_stop="100610"/>
          <exon e_start="101697" e_stop="101966"/>
          <exon e_start="103990" e_stop="104018"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTGGTAAAATTTAATTTCGCATCATCATATATTCCAACTTATAGGGTTTTCAATCGTTCTGTGCTTATTTCTTCCACTGCAATTATTTTAGTACTACTTTCTCTGATTGAAGGACGGAGAAATCTAAACTTTTTTATGGTGTTGGACGTAATTGCTTTCTGCTACGTTAATTAGTTGTATATTAATGCATTTTCTGTTAGTAGTAAGTTATACTATCAGTTTATTGTCATGTCTAAATTATGTTTCTTAAGCAGAATTCGGGGTTGTTTCATTTGACGAAAAAGTGAATCTTTAGATTCAAATTTAGCTGTCTATGATGTAATTCTTATCCTTATTGCAAATTGCAAACAGAGTAAATAGCTGAGTAAGTAAGTTACCCATTATTTTAAGCATCTATCATAGTAGGCCAAGATCCCAAGTAGAAATACTTGGCCAGTTAGACTTAAGTTCTTACCAGTCCTCTATGGGGAGCTTAGTCTCCTAGGTGGAGAGAAAGTTTAAAGTTTTGTGCAAGGTATGTTAGATATGAATAAGTTTGTTGATAGTCTATTTGGTGGTAGAAGCTCACTTAGAATGAAAGACCCTTAATTGCTAGCCGGAGCAATTAATGAGGCAAGACTTAGAGGGAAAAGATCGTATTTGAGGATATTGCAAGTCTATTATGTTGGCATTCTTTGTCGTTACTTAGAAAAGTTGTGATGGCAAGGATGGACTTGTTGAAATAGAAATCTTTGGTAAATTACATCCTATCAATCAGGCTTTTGAAGAATGGATGTTTGCTTGATGGTTTTAAGTAAAGGATACATATAACTGTACTATCTATCAATTTATGCCTACAAAAGAGTGTCAGAGAAATCTTCCCCCAACCTTATGGCTACTCCAGGTTGTGTGCATCTATGTTCTTGTGATGTTATGTTATACAGGGCGTCCTTTTGCTCATTTTGTGTTTATTTATCATTGCATATTTATATATTTCTCTTATTATGCTTGGAATGTACAACTTATGTTTTCATTTAAGAATAGCCGAGGTAGTAAGTCACTCATCTAAGAATTGCTGACATGTGTTTTATTCACTTTCATGTCTTGTAGCTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAGGTAGGTATACAAATTGATACTTCAATATGCATCAGAACTTTTGAATTATTTGCACCCCTCGACTCTTTATGTGTACCTGCTACCTCCCACCAACACAGTTACAAGTAACTTTGCCCATCAAAGTTGAGGTAGATGGGAAGAGATCATCTAGTGTCTTTTGTGTTTGCCTGGATTCTAATCTTGGTCCCTAAGAACAGTTTTTTGTGTTTTTAGGTTATGTTACCAAACTGGAAGGTGTAGTACATGGTTTATACTTCCTTAGTTGTTTACTATGTTGATGAACTACTGTCAAGTTGAAGTTTTGTTCTTAATATGGTGAATCATCATAACTCTTGAAATTGGGGATTGAGCACTTTGTTGCTGAGAAGAACTGGTATAACTACCATAAATAACTTGGACAGAATGTAGAATTCTCTGTACTCAGTAGTCAATTCAACCTCCTACACCACATAGTTCACCTTGTCGATCATATCTTCTCTTCCCCAAACACGCAACTGCTAAGCTGATCCTTTTTTCCATTCGTTCACATCCTTTGAAGTCTTTAACTGGTTTTTTTAATACCAAGAAATCTGTCTGGATCCTGCCCTTTGGACCAACTGCGGCCTTTGAAAAATGGGGATAGTGGGCCAACCTTAAAATGGCTTCTCTTTTCAATTTTTTTTTAAAAATGTGATGGGTAAGAAAATCTTTGCTACCTCTTGAGTCTTGCATCTAGATTGCTAACCCTATTGTACTTTTATCAAATTGCTCTCTTATTGCCAAGTTCCTCAATGTAAGGTCCCTAATTAGTAATATCTATAAGTTGACTCTATATGAGAACACAACAAAGGGATTGTATCCCAAATGTTCCCTAACTGCCTTTCTAATTAGGAAGGTTTTCCATATGGATGGGCATTCAAGAATTGTCTAGATATGACCTGATTCATTGCAGACATCCAAAGAAAACATATTCTAGATATCTTTGGCTGCCTCATAGTGTAGAAAAAGCTGTTTACTGATTTTGCTCATGGAATGCACATGTAGTTGCCGCTGCTCCACATATTCGCCCTTTTGTTGTTTGATAATCTTGAGTTATTACAAGTTCCATACTATTGTCCACCCAAAGAAGGCTACTTTTATGGCAGATTTTGTCTTCCGGATGAACTTCCACGGAGGTTCAACATTTACCGTCCTGCCTCAATAGTGTACACCGATTAAATGGAAAAGGATTTCACTGGGAAAGACTACCTTTTCCTTCTGTCAAGATCAGTCTGTTAGGTTCCGAGTTTATGACTTAGATCAGTGACAAGTAAAAGTGAAAATCTATTTTTGGAATAGTGGACAAGTAATAGTGAAAATCTATTTTGGAATAGTGGACAAATAATAGTGAACAGAGTACTTTTTTTTATTTTTACATAGTTACATTGAGTTCACACCTTCCAGTTATAGTTATCCTCGTTGAAAATGTAAATGACTTTGTTTGGCACTTGTTGCTAGATAGTAGATTGTTACTCCTTGGATCAAATGATCAGTTCACACGGGTTTAAGCTACTCGTAGAAAAGTTAATAGAAAAAATATGTATCATGAACAAGACTTTATATTTTACACCATCTGTTTCAATGTATGTGAAACTCTTTCCATTTTGGGGATATTCTAAAATGTTTGACATGCTTCCTCCTATATTATTACTTTATACATCTTTTGTGAATCTTAATTCATTTAACTATTCAAATCTTAAACTTTGATGTGATCCATACTAAAATTTCAAACACAATTACTGTTATTATACCTAAGTTAAAGCAACATCCTGAACTCCGTATCTAGTACTGTCTATTCAAGCTTGCAACCAGATGCTAGACAAGACATGAACTTCACACCTCTTGCTGTGTCTAGATTAAGTTTTTTGGAATTTACTTCAGCCTTCATCTCTTCATCTCGAAGACAATTTTGAGCACTGAATGCAATTGCTGTCATCATGGTTCGTGCCAAGTTTTGATTCATACTGAATGGAGACTAACAAGTTGCATTGTTTTATTATTACAGAAGCATACAAGAGCGGAGAGTTGCAAGAA</genome_strand>
        <mrna_strand>ATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACAAGAGCGGAGAGTTGCAAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E294907" ref_strand="+" ref_description="SGN-E294907 [cLET-17-K5]">
      <seq>atttcgcttcaatggcaactcccctccgttatcaggagtactacaacctcggcagctcaacgtacgaccgatgtctttctgtcgtttcctacggttcattccggtcgtgctcttcagagctcggccattcccagtagctcaattgctaccggcaaacgggatggacggttaagatcccttcgttgtctatctgctctggatcctaacttgaagtctacgctggataaggttgtcacatcacaaaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggattgaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgttgtagaagcatacaagagcggagagttgcaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="100118" stop="104318"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100418" g_stop="100610" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="193" r_length="193" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101697" g_stop="101966" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="463" r_length="270" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103990" g_stop="104018" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="492" r_length="29" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E294907" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E294907" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100418" e_stop="100610"/>
          <exon e_start="101697" e_stop="101966"/>
          <exon e_start="103990" e_stop="104018"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTGGTAAAATTTAATTTCGCATCATCATATATTCCAACTTATAGGGTTTTCAATCGTTCTGTGCTTATTTCTTCCACTGCAATTATTTTAGTACTACTTTCTCTGATTGAAGGACGGAGAAATCTAAACTTTTTTATGGTGTTGGACGTAATTGCTTTCTGCTACGTTAATTAGTTGTATATTAATGCATTTTCTGTTAGTAGTAAGTTATACTATCAGTTTATTGTCATGTCTAAATTATGTTTCTTAAGCAGAATTCGGGGTTGTTTCATTTGACGAAAAAGTGAATCTTTAGATTCAAATTTAGCTGTCTATGATGTAATTCTTATCCTTATTGCAAATTGCAAACAGAGTAAATAGCTGAGTAAGTAAGTTACCCATTATTTTAAGCATCTATCATAGTAGGCCAAGATCCCAAGTAGAAATACTTGGCCAGTTAGACTTAAGTTCTTACCAGTCCTCTATGGGGAGCTTAGTCTCCTAGGTGGAGAGAAAGTTTAAAGTTTTGTGCAAGGTATGTTAGATATGAATAAGTTTGTTGATAGTCTATTTGGTGGTAGAAGCTCACTTAGAATGAAAGACCCTTAATTGCTAGCCGGAGCAATTAATGAGGCAAGACTTAGAGGGAAAAGATCGTATTTGAGGATATTGCAAGTCTATTATGTTGGCATTCTTTGTCGTTACTTAGAAAAGTTGTGATGGCAAGGATGGACTTGTTGAAATAGAAATCTTTGGTAAATTACATCCTATCAATCAGGCTTTTGAAGAATGGATGTTTGCTTGATGGTTTTAAGTAAAGGATACATATAACTGTACTATCTATCAATTTATGCCTACAAAAGAGTGTCAGAGAAATCTTCCCCCAACCTTATGGCTACTCCAGGTTGTGTGCATCTATGTTCTTGTGATGTTATGTTATACAGGGCGTCCTTTTGCTCATTTTGTGTTTATTTATCATTGCATATTTATATATTTCTCTTATTATGCTTGGAATGTACAACTTATGTTTTCATTTAAGAATAGCCGAGGTAGTAAGTCACTCATCTAAGAATTGCTGACATGTGTTTTATTCACTTTCATGTCTTGTAGCTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAGGTAGGTATACAAATTGATACTTCAATATGCATCAGAACTTTTGAATTATTTGCACCCCTCGACTCTTTATGTGTACCTGCTACCTCCCACCAACACAGTTACAAGTAACTTTGCCCATCAAAGTTGAGGTAGATGGGAAGAGATCATCTAGTGTCTTTTGTGTTTGCCTGGATTCTAATCTTGGTCCCTAAGAACAGTTTTTTGTGTTTTTAGGTTATGTTACCAAACTGGAAGGTGTAGTACATGGTTTATACTTCCTTAGTTGTTTACTATGTTGATGAACTACTGTCAAGTTGAAGTTTTGTTCTTAATATGGTGAATCATCATAACTCTTGAAATTGGGGATTGAGCACTTTGTTGCTGAGAAGAACTGGTATAACTACCATAAATAACTTGGACAGAATGTAGAATTCTCTGTACTCAGTAGTCAATTCAACCTCCTACACCACATAGTTCACCTTGTCGATCATATCTTCTCTTCCCCAAACACGCAACTGCTAAGCTGATCCTTTTTTCCATTCGTTCACATCCTTTGAAGTCTTTAACTGGTTTTTTTAATACCAAGAAATCTGTCTGGATCCTGCCCTTTGGACCAACTGCGGCCTTTGAAAAATGGGGATAGTGGGCCAACCTTAAAATGGCTTCTCTTTTCAATTTTTTTTTAAAAATGTGATGGGTAAGAAAATCTTTGCTACCTCTTGAGTCTTGCATCTAGATTGCTAACCCTATTGTACTTTTATCAAATTGCTCTCTTATTGCCAAGTTCCTCAATGTAAGGTCCCTAATTAGTAATATCTATAAGTTGACTCTATATGAGAACACAACAAAGGGATTGTATCCCAAATGTTCCCTAACTGCCTTTCTAATTAGGAAGGTTTTCCATATGGATGGGCATTCAAGAATTGTCTAGATATGACCTGATTCATTGCAGACATCCAAAGAAAACATATTCTAGATATCTTTGGCTGCCTCATAGTGTAGAAAAAGCTGTTTACTGATTTTGCTCATGGAATGCACATGTAGTTGCCGCTGCTCCACATATTCGCCCTTTTGTTGTTTGATAATCTTGAGTTATTACAAGTTCCATACTATTGTCCACCCAAAGAAGGCTACTTTTATGGCAGATTTTGTCTTCCGGATGAACTTCCACGGAGGTTCAACATTTACCGTCCTGCCTCAATAGTGTACACCGATTAAATGGAAAAGGATTTCACTGGGAAAGACTACCTTTTCCTTCTGTCAAGATCAGTCTGTTAGGTTCCGAGTTTATGACTTAGATCAGTGACAAGTAAAAGTGAAAATCTATTTTTGGAATAGTGGACAAGTAATAGTGAAAATCTATTTTGGAATAGTGGACAAATAATAGTGAACAGAGTACTTTTTTTTATTTTTACATAGTTACATTGAGTTCACACCTTCCAGTTATAGTTATCCTCGTTGAAAATGTAAATGACTTTGTTTGGCACTTGTTGCTAGATAGTAGATTGTTACTCCTTGGATCAAATGATCAGTTCACACGGGTTTAAGCTACTCGTAGAAAAGTTAATAGAAAAAATATGTATCATGAACAAGACTTTATATTTTACACCATCTGTTTCAATGTATGTGAAACTCTTTCCATTTTGGGGATATTCTAAAATGTTTGACATGCTTCCTCCTATATTATTACTTTATACATCTTTTGTGAATCTTAATTCATTTAACTATTCAAATCTTAAACTTTGATGTGATCCATACTAAAATTTCAAACACAATTACTGTTATTATACCTAAGTTAAAGCAACATCCTGAACTCCGTATCTAGTACTGTCTATTCAAGCTTGCAACCAGATGCTAGACAAGACATGAACTTCACACCTCTTGCTGTGTCTAGATTAAGTTTTTTGGAATTTACTTCAGCCTTCATCTCTTCATCTCGAAGACAATTTTGAGCACTGAATGCAATTGCTGTCATCATGGTTCGTGCCAAGTTTTGATTCATACTGAATGGAGACTAACAAGTTGCATTGTTTTATTATTACAGAAGCATACAAGAGCGGAGAGTTGCAAGAA</genome_strand>
        <mrna_strand>ATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACAAGAGCGGAGAGTTGCAAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E295633" ref_strand="+" ref_description="SGN-E295633 [cLET-25-A10]">
      <seq>atttcgcttcaatggcaactcccctccgttgtcaggagtactacaaccttggcagctcaacgtacgaccgatgtctttctgtcgtttcctacggttcattccggtcgtgctcttcatagctcggacattcccagtagctcaattgctgccggcaaacgggatggacggttaagatcccttcgtagtctatctgctctggatcctaacttgaagtctacgctggataaggttgtcacatcacaaaaaatcgcgttgttcatgaaggggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="100118" stop="102072"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100418" g_stop="100610" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="193" r_length="193" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101697" g_stop="101772" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="269" r_length="76" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E295633" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>269</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E295633" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100418" e_stop="100610"/>
          <exon e_start="101697" e_stop="101772"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTGGTAAAATTTAATTTCGCATCATCATATATTCCAACTTATAGGGTTTTCAATCGTTCTGTGCTTATTTCTTCCACTGCAATTATTTTAGTACTACTTTCTCTGATTGAAGGACGGAGAAATCTAAACTTTTTTATGGTGTTGGACGTAATTGCTTTCTGCTACGTTAATTAGTTGTATATTAATGCATTTTCTGTTAGTAGTAAGTTATACTATCAGTTTATTGTCATGTCTAAATTATGTTTCTTAAGCAGAATTCGGGGTTGTTTCATTTGACGAAAAAGTGAATCTTTAGATTCAAATTTAGCTGTCTATGATGTAATTCTTATCCTTATTGCAAATTGCAAACAGAGTAAATAGCTGAGTAAGTAAGTTACCCATTATTTTAAGCATCTATCATAGTAGGCCAAGATCCCAAGTAGAAATACTTGGCCAGTTAGACTTAAGTTCTTACCAGTCCTCTATGGGGAGCTTAGTCTCCTAGGTGGAGAGAAAGTTTAAAGTTTTGTGCAAGGTATGTTAGATATGAATAAGTTTGTTGATAGTCTATTTGGTGGTAGAAGCTCACTTAGAATGAAAGACCCTTAATTGCTAGCCGGAGCAATTAATGAGGCAAGACTTAGAGGGAAAAGATCGTATTTGAGGATATTGCAAGTCTATTATGTTGGCATTCTTTGTCGTTACTTAGAAAAGTTGTGATGGCAAGGATGGACTTGTTGAAATAGAAATCTTTGGTAAATTACATCCTATCAATCAGGCTTTTGAAGAATGGATGTTTGCTTGATGGTTTTAAGTAAAGGATACATATAACTGTACTATCTATCAATTTATGCCTACAAAAGAGTGTCAGAGAAATCTTCCCCCAACCTTATGGCTACTCCAGGTTGTGTGCATCTATGTTCTTGTGATGTTATGTTATACAGGGCGTCCTTTTGCTCATTTTGTGTTTATTTATCATTGCATATTTATATATTTCTCTTATTATGCTTGGAATGTACAACTTATGTTTTCATTTAAGAATAGCCGAGGTAGTAAGTCACTCATCTAAGAATTGCTGACATGTGTTTTATTCACTTTCATGTCTTGTAGCTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGAC</genome_strand>
        <mrna_strand>ATTTCGCTTCAATGGCAACTCCCCTCCGTTGTCAGGAGTACTACAACCTTGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCATAGCTCGGACATTCCCAGTAGCTCAATTGCTGCCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTAGTCTATCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGCGTTGTTCATGAAGGGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E296617" ref_strand="+" ref_description="SGN-E296617 [cLET-39-H18]">
      <seq>acgtacgaccgatgtctttctgtcgtttcctacggttcattccggtcgtgctcttcagagctcggccattcccagtagctcaattgctaccggcaaacgggatggacggttaagatcccttcgttgtctatctgctctggatcctaacttgaagtctacgctggataaggttgtcacatcacaaaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="100177" stop="102180"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100477" g_stop="100610" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="134" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101697" g_stop="101880" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="318" r_length="184" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E296617" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>318</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E296617" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100477" e_stop="100610"/>
          <exon e_start="101697" e_stop="101880"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTGGTAAAATTTAATTTCGCATCATCATATATTCCAACTTATAGGGTTTTCAATCGTTCTGTGCTTATTTCTTCCACTGCAATTATTTTAGTACTACTTTCTCTGATTGAAGGACGGAGAAATCTAAACTTTTTTATGGTGTTGGACGTAATTGCTTTCTGCTACGTTAATTAGTTGTATATTAATGCATTTTCTGTTAGTAGTAAGTTATACTATCAGTTTATTGTCATGTCTAAATTATGTTTCTTAAGCAGAATTCGGGGTTGTTTCATTTGACGAAAAAGTGAATCTTTAGATTCAAATTTAGCTGTCTATGATGTAATTCTTATCCTTATTGCAAATTGCAAACAGAGTAAATAGCTGAGTAAGTAAGTTACCCATTATTTTAAGCATCTATCATAGTAGGCCAAGATCCCAAGTAGAAATACTTGGCCAGTTAGACTTAAGTTCTTACCAGTCCTCTATGGGGAGCTTAGTCTCCTAGGTGGAGAGAAAGTTTAAAGTTTTGTGCAAGGTATGTTAGATATGAATAAGTTTGTTGATAGTCTATTTGGTGGTAGAAGCTCACTTAGAATGAAAGACCCTTAATTGCTAGCCGGAGCAATTAATGAGGCAAGACTTAGAGGGAAAAGATCGTATTTGAGGATATTGCAAGTCTATTATGTTGGCATTCTTTGTCGTTACTTAGAAAAGTTGTGATGGCAAGGATGGACTTGTTGAAATAGAAATCTTTGGTAAATTACATCCTATCAATCAGGCTTTTGAAGAATGGATGTTTGCTTGATGGTTTTAAGTAAAGGATACATATAACTGTACTATCTATCAATTTATGCCTACAAAAGAGTGTCAGAGAAATCTTCCCCCAACCTTATGGCTACTCCAGGTTGTGTGCATCTATGTTCTTGTGATGTTATGTTATACAGGGCGTCCTTTTGCTCATTTTGTGTTTATTTATCATTGCATATTTATATATTTCTCTTATTATGCTTGGAATGTACAACTTATGTTTTCATTTAAGAATAGCCGAGGTAGTAAGTCACTCATCTAAGAATTGCTGACATGTGTTTTATTCACTTTCATGTCTTGTAGCTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCA</genome_strand>
        <mrna_strand>ACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E715956" ref_strand="+" ref_description="SGN-E715956 [FB15CH10]">
      <seq>ttaagatcccttcgttgtctatctgctctggatcctaacttgaagtctacgctggataaggttgtcacatcacaaaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggattgaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgttgtagaagcatacaagagcggagagttgcaagaattgctagaaaggacattgtgctcctgatggattcagatgtaataagcccattattaaattgtatggactatcaggtgtctgttgttcttactgcagatgatgaaaatattttactatgtttatttcctcttcaaggactgaactttaagatatgaatacatcttggaagatgtggttttcaattgaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="100286" stop="104505"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100586" g_stop="100610" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101697" g_stop="101966" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="295" r_length="270" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103990" g_stop="104220" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="526" r_length="231" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E715956" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E715956" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100586" e_stop="100610"/>
          <exon e_start="101697" e_stop="101966"/>
          <exon e_start="103990" e_stop="104220"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAAGATCCCTTCGTTGTCTATCTGGTAAAATTTAATTTCGCATCATCATATATTCCAACTTATAGGGTTTTCAATCGTTCTGTGCTTATTTCTTCCACTGCAATTATTTTAGTACTACTTTCTCTGATTGAAGGACGGAGAAATCTAAACTTTTTTATGGTGTTGGACGTAATTGCTTTCTGCTACGTTAATTAGTTGTATATTAATGCATTTTCTGTTAGTAGTAAGTTATACTATCAGTTTATTGTCATGTCTAAATTATGTTTCTTAAGCAGAATTCGGGGTTGTTTCATTTGACGAAAAAGTGAATCTTTAGATTCAAATTTAGCTGTCTATGATGTAATTCTTATCCTTATTGCAAATTGCAAACAGAGTAAATAGCTGAGTAAGTAAGTTACCCATTATTTTAAGCATCTATCATAGTAGGCCAAGATCCCAAGTAGAAATACTTGGCCAGTTAGACTTAAGTTCTTACCAGTCCTCTATGGGGAGCTTAGTCTCCTAGGTGGAGAGAAAGTTTAAAGTTTTGTGCAAGGTATGTTAGATATGAATAAGTTTGTTGATAGTCTATTTGGTGGTAGAAGCTCACTTAGAATGAAAGACCCTTAATTGCTAGCCGGAGCAATTAATGAGGCAAGACTTAGAGGGAAAAGATCGTATTTGAGGATATTGCAAGTCTATTATGTTGGCATTCTTTGTCGTTACTTAGAAAAGTTGTGATGGCAAGGATGGACTTGTTGAAATAGAAATCTTTGGTAAATTACATCCTATCAATCAGGCTTTTGAAGAATGGATGTTTGCTTGATGGTTTTAAGTAAAGGATACATATAACTGTACTATCTATCAATTTATGCCTACAAAAGAGTGTCAGAGAAATCTTCCCCCAACCTTATGGCTACTCCAGGTTGTGTGCATCTATGTTCTTGTGATGTTATGTTATACAGGGCGTCCTTTTGCTCATTTTGTGTTTATTTATCATTGCATATTTATATATTTCTCTTATTATGCTTGGAATGTACAACTTATGTTTTCATTTAAGAATAGCCGAGGTAGTAAGTCACTCATCTAAGAATTGCTGACATGTGTTTTATTCACTTTCATGTCTTGTAGCTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAGGTAGGTATACAAATTGATACTTCAATATGCATCAGAACTTTTGAATTATTTGCACCCCTCGACTCTTTATGTGTACCTGCTACCTCCCACCAACACAGTTACAAGTAACTTTGCCCATCAAAGTTGAGGTAGATGGGAAGAGATCATCTAGTGTCTTTTGTGTTTGCCTGGATTCTAATCTTGGTCCCTAAGAACAGTTTTTTGTGTTTTTAGGTTATGTTACCAAACTGGAAGGTGTAGTACATGGTTTATACTTCCTTAGTTGTTTACTATGTTGATGAACTACTGTCAAGTTGAAGTTTTGTTCTTAATATGGTGAATCATCATAACTCTTGAAATTGGGGATTGAGCACTTTGTTGCTGAGAAGAACTGGTATAACTACCATAAATAACTTGGACAGAATGTAGAATTCTCTGTACTCAGTAGTCAATTCAACCTCCTACACCACATAGTTCACCTTGTCGATCATATCTTCTCTTCCCCAAACACGCAACTGCTAAGCTGATCCTTTTTTCCATTCGTTCACATCCTTTGAAGTCTTTAACTGGTTTTTTTAATACCAAGAAATCTGTCTGGATCCTGCCCTTTGGACCAACTGCGGCCTTTGAAAAATGGGGATAGTGGGCCAACCTTAAAATGGCTTCTCTTTTCAATTTTTTTTTAAAAATGTGATGGGTAAGAAAATCTTTGCTACCTCTTGAGTCTTGCATCTAGATTGCTAACCCTATTGTACTTTTATCAAATTGCTCTCTTATTGCCAAGTTCCTCAATGTAAGGTCCCTAATTAGTAATATCTATAAGTTGACTCTATATGAGAACACAACAAAGGGATTGTATCCCAAATGTTCCCTAACTGCCTTTCTAATTAGGAAGGTTTTCCATATGGATGGGCATTCAAGAATTGTCTAGATATGACCTGATTCATTGCAGACATCCAAAGAAAACATATTCTAGATATCTTTGGCTGCCTCATAGTGTAGAAAAAGCTGTTTACTGATTTTGCTCATGGAATGCACATGTAGTTGCCGCTGCTCCACATATTCGCCCTTTTGTTGTTTGATAATCTTGAGTTATTACAAGTTCCATACTATTGTCCACCCAAAGAAGGCTACTTTTATGGCAGATTTTGTCTTCCGGATGAACTTCCACGGAGGTTCAACATTTACCGTCCTGCCTCAATAGTGTACACCGATTAAATGGAAAAGGATTTCACTGGGAAAGACTACCTTTTCCTTCTGTCAAGATCAGTCTGTTAGGTTCCGAGTTTATGACTTAGATCAGTGACAAGTAAAAGTGAAAATCTATTTTTGGAATAGTGGACAAGTAATAGTGAAAATCTATTTTGGAATAGTGGACAAATAATAGTGAACAGAGTACTTTTTTTTATTTTTACATAGTTACATTGAGTTCACACCTTCCAGTTATAGTTATCCTCGTTGAAAATGTAAATGACTTTGTTTGGCACTTGTTGCTAGATAGTAGATTGTTACTCCTTGGATCAAATGATCAGTTCACACGGGTTTAAGCTACTCGTAGAAAAGTTAATAGAAAAAATATGTATCATGAACAAGACTTTATATTTTACACCATCTGTTTCAATGTATGTGAAACTCTTTCCATTTTGGGGATATTCTAAAATGTTTGACATGCTTCCTCCTATATTATTACTTTATACATCTTTTGTGAATCTTAATTCATTTAACTATTCAAATCTTAAACTTTGATGTGATCCATACTAAAATTTCAAACACAATTACTGTTATTATACCTAAGTTAAAGCAACATCCTGAACTCCGTATCTAGTACTGTCTATTCAAGCTTGCAACCAGATGCTAGACAAGACATGAACTTCACACCTCTTGCTGTGTCTAGATTAAGTTTTTTGGAATTTACTTCAGCCTTCATCTCTTCATCTCGAAGACAATTTTGAGCACTGAATGCAATTGCTGTCATCATGGTTCGTGCCAAGTTTTGATTCATACTGAATGGAGACTAACAAGTTGCATTGTTTTATTATTACAGAAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAGATGTGGTTTTCAATTGCATCTACTTAGTAATCA</genome_strand>
        <mrna_strand>TTAAGATCCCTTCGTTGTCTATCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAGATGTGGTTTTCAATTGAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E234720" ref_strand="+" ref_description="SGN-E234720 [cLEL-6-G14](-)">
      <seq>atcctaacttgaagtctacgctggataaggttgtcacatcacaaaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggattgaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgttgtagaagcatacaagagcggagagttgcaagaattgctagaaaggacattgtgctcctgatggattcagatgtaataagcccattattaaattgtatggactatcaggtgtctgttgttcttactgcagatgatgaaaatattttactatgtttatttcctcttaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="101403" stop="104452"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101703" g_stop="101966" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="264" r_length="264" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103990" g_stop="104170" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="445" r_length="181" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E234720" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>445</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E234720" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101703" e_stop="101966"/>
          <exon e_start="103990" e_stop="104170"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAGGTAGGTATACAAATTGATACTTCAATATGCATCAGAACTTTTGAATTATTTGCACCCCTCGACTCTTTATGTGTACCTGCTACCTCCCACCAACACAGTTACAAGTAACTTTGCCCATCAAAGTTGAGGTAGATGGGAAGAGATCATCTAGTGTCTTTTGTGTTTGCCTGGATTCTAATCTTGGTCCCTAAGAACAGTTTTTTGTGTTTTTAGGTTATGTTACCAAACTGGAAGGTGTAGTACATGGTTTATACTTCCTTAGTTGTTTACTATGTTGATGAACTACTGTCAAGTTGAAGTTTTGTTCTTAATATGGTGAATCATCATAACTCTTGAAATTGGGGATTGAGCACTTTGTTGCTGAGAAGAACTGGTATAACTACCATAAATAACTTGGACAGAATGTAGAATTCTCTGTACTCAGTAGTCAATTCAACCTCCTACACCACATAGTTCACCTTGTCGATCATATCTTCTCTTCCCCAAACACGCAACTGCTAAGCTGATCCTTTTTTCCATTCGTTCACATCCTTTGAAGTCTTTAACTGGTTTTTTTAATACCAAGAAATCTGTCTGGATCCTGCCCTTTGGACCAACTGCGGCCTTTGAAAAATGGGGATAGTGGGCCAACCTTAAAATGGCTTCTCTTTTCAATTTTTTTTTAAAAATGTGATGGGTAAGAAAATCTTTGCTACCTCTTGAGTCTTGCATCTAGATTGCTAACCCTATTGTACTTTTATCAAATTGCTCTCTTATTGCCAAGTTCCTCAATGTAAGGTCCCTAATTAGTAATATCTATAAGTTGACTCTATATGAGAACACAACAAAGGGATTGTATCCCAAATGTTCCCTAACTGCCTTTCTAATTAGGAAGGTTTTCCATATGGATGGGCATTCAAGAATTGTCTAGATATGACCTGATTCATTGCAGACATCCAAAGAAAACATATTCTAGATATCTTTGGCTGCCTCATAGTGTAGAAAAAGCTGTTTACTGATTTTGCTCATGGAATGCACATGTAGTTGCCGCTGCTCCACATATTCGCCCTTTTGTTGTTTGATAATCTTGAGTTATTACAAGTTCCATACTATTGTCCACCCAAAGAAGGCTACTTTTATGGCAGATTTTGTCTTCCGGATGAACTTCCACGGAGGTTCAACATTTACCGTCCTGCCTCAATAGTGTACACCGATTAAATGGAAAAGGATTTCACTGGGAAAGACTACCTTTTCCTTCTGTCAAGATCAGTCTGTTAGGTTCCGAGTTTATGACTTAGATCAGTGACAAGTAAAAGTGAAAATCTATTTTTGGAATAGTGGACAAGTAATAGTGAAAATCTATTTTGGAATAGTGGACAAATAATAGTGAACAGAGTACTTTTTTTTATTTTTACATAGTTACATTGAGTTCACACCTTCCAGTTATAGTTATCCTCGTTGAAAATGTAAATGACTTTGTTTGGCACTTGTTGCTAGATAGTAGATTGTTACTCCTTGGATCAAATGATCAGTTCACACGGGTTTAAGCTACTCGTAGAAAAGTTAATAGAAAAAATATGTATCATGAACAAGACTTTATATTTTACACCATCTGTTTCAATGTATGTGAAACTCTTTCCATTTTGGGGATATTCTAAAATGTTTGACATGCTTCCTCCTATATTATTACTTTATACATCTTTTGTGAATCTTAATTCATTTAACTATTCAAATCTTAAACTTTGATGTGATCCATACTAAAATTTCAAACACAATTACTGTTATTATACCTAAGTTAAAGCAACATCCTGAACTCCGTATCTAGTACTGTCTATTCAAGCTTGCAACCAGATGCTAGACAAGACATGAACTTCACACCTCTTGCTGTGTCTAGATTAAGTTTTTTGGAATTTACTTCAGCCTTCATCTCTTCATCTCGAAGACAATTTTGAGCACTGAATGCAATTGCTGTCATCATGGTTCGTGCCAAGTTTTGATTCATACTGAATGGAGACTAACAAGTTGCATTGTTTTATTATTACAGAAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATA</genome_strand>
        <mrna_strand>ATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E285783" ref_strand="-" ref_description="SGN-E285783 [cLES-5-I18]">
      <seq>cgctggataaggttgtcacatcacaaaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggattgaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgttgtagaagcatacaagagcggagagttgcaagaattgctagaaaggacattgtgctcctgatggattcagatgtaataagcccattattaaattgtatggactatcaggtgtctgttgttcttactgcagatgatgaaaatattttactatgtttatttcctcttcaaggactgaactttaagatatgaatacatcttggaagatgtggttttcaattgcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="101421" stop="104505"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101721" g_stop="101966" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="246" r_length="246" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103990" g_stop="104215" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="472" r_length="226" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E285783" ref_strand="-">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E285783" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="101721" e_stop="101966"/>
          <exon e_start="103990" e_stop="104215"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAGGTAGGTATACAAATTGATACTTCAATATGCATCAGAACTTTTGAATTATTTGCACCCCTCGACTCTTTATGTGTACCTGCTACCTCCCACCAACACAGTTACAAGTAACTTTGCCCATCAAAGTTGAGGTAGATGGGAAGAGATCATCTAGTGTCTTTTGTGTTTGCCTGGATTCTAATCTTGGTCCCTAAGAACAGTTTTTTGTGTTTTTAGGTTATGTTACCAAACTGGAAGGTGTAGTACATGGTTTATACTTCCTTAGTTGTTTACTATGTTGATGAACTACTGTCAAGTTGAAGTTTTGTTCTTAATATGGTGAATCATCATAACTCTTGAAATTGGGGATTGAGCACTTTGTTGCTGAGAAGAACTGGTATAACTACCATAAATAACTTGGACAGAATGTAGAATTCTCTGTACTCAGTAGTCAATTCAACCTCCTACACCACATAGTTCACCTTGTCGATCATATCTTCTCTTCCCCAAACACGCAACTGCTAAGCTGATCCTTTTTTCCATTCGTTCACATCCTTTGAAGTCTTTAACTGGTTTTTTTAATACCAAGAAATCTGTCTGGATCCTGCCCTTTGGACCAACTGCGGCCTTTGAAAAATGGGGATAGTGGGCCAACCTTAAAATGGCTTCTCTTTTCAATTTTTTTTTAAAAATGTGATGGGTAAGAAAATCTTTGCTACCTCTTGAGTCTTGCATCTAGATTGCTAACCCTATTGTACTTTTATCAAATTGCTCTCTTATTGCCAAGTTCCTCAATGTAAGGTCCCTAATTAGTAATATCTATAAGTTGACTCTATATGAGAACACAACAAAGGGATTGTATCCCAAATGTTCCCTAACTGCCTTTCTAATTAGGAAGGTTTTCCATATGGATGGGCATTCAAGAATTGTCTAGATATGACCTGATTCATTGCAGACATCCAAAGAAAACATATTCTAGATATCTTTGGCTGCCTCATAGTGTAGAAAAAGCTGTTTACTGATTTTGCTCATGGAATGCACATGTAGTTGCCGCTGCTCCACATATTCGCCCTTTTGTTGTTTGATAATCTTGAGTTATTACAAGTTCCATACTATTGTCCACCCAAAGAAGGCTACTTTTATGGCAGATTTTGTCTTCCGGATGAACTTCCACGGAGGTTCAACATTTACCGTCCTGCCTCAATAGTGTACACCGATTAAATGGAAAAGGATTTCACTGGGAAAGACTACCTTTTCCTTCTGTCAAGATCAGTCTGTTAGGTTCCGAGTTTATGACTTAGATCAGTGACAAGTAAAAGTGAAAATCTATTTTTGGAATAGTGGACAAGTAATAGTGAAAATCTATTTTGGAATAGTGGACAAATAATAGTGAACAGAGTACTTTTTTTTATTTTTACATAGTTACATTGAGTTCACACCTTCCAGTTATAGTTATCCTCGTTGAAAATGTAAATGACTTTGTTTGGCACTTGTTGCTAGATAGTAGATTGTTACTCCTTGGATCAAATGATCAGTTCACACGGGTTTAAGCTACTCGTAGAAAAGTTAATAGAAAAAATATGTATCATGAACAAGACTTTATATTTTACACCATCTGTTTCAATGTATGTGAAACTCTTTCCATTTTGGGGATATTCTAAAATGTTTGACATGCTTCCTCCTATATTATTACTTTATACATCTTTTGTGAATCTTAATTCATTTAACTATTCAAATCTTAAACTTTGATGTGATCCATACTAAAATTTCAAACACAATTACTGTTATTATACCTAAGTTAAAGCAACATCCTGAACTCCGTATCTAGTACTGTCTATTCAAGCTTGCAACCAGATGCTAGACAAGACATGAACTTCACACCTCTTGCTGTGTCTAGATTAAGTTTTTTGGAATTTACTTCAGCCTTCATCTCTTCATCTCGAAGACAATTTTGAGCACTGAATGCAATTGCTGTCATCATGGTTCGTGCCAAGTTTTGATTCATACTGAATGGAGACTAACAAGTTGCATTGTTTTATTATTACAGAAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAGATGTGGTTTTCAATTGCATCTACTTAGT</genome_strand>
        <mrna_strand>CGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAGATGTGGTTTTCAATTGCAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E217742" ref_strand="+" ref_description="SGN-E217742 [cLEL-25-M3](-)">
      <seq>aaaaaatcgtgttgttcatgaaggggaccaaggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggattgaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgttgtagaagcatacaagagcggagagttgcaagaattgctagaaaggccattgtgctcctgatggattcagatgtaataagcccattattaaattgtatggactatcaggtgtctgttgttcttactgcagatgatgaaaatattttactatgtttatttcctcttcaaggactgaactttaagatatgaatacatcttggaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="101445" stop="104488"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101745" g_stop="101966" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="222" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103990" g_stop="104189" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="422" r_length="200" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104190" i_stop="104277" i_length="88">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.712" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104278" g_stop="104289" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="434" r_length="12" r_score="0.583"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E217742" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>434</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E217742" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101745" e_stop="101966"/>
          <exon e_start="103990" e_stop="104189"/>
          <exon e_start="104278" e_stop="104289"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAGGTAGGTATACAAATTGATACTTCAATATGCATCAGAACTTTTGAATTATTTGCACCCCTCGACTCTTTATGTGTACCTGCTACCTCCCACCAACACAGTTACAAGTAACTTTGCCCATCAAAGTTGAGGTAGATGGGAAGAGATCATCTAGTGTCTTTTGTGTTTGCCTGGATTCTAATCTTGGTCCCTAAGAACAGTTTTTTGTGTTTTTAGGTTATGTTACCAAACTGGAAGGTGTAGTACATGGTTTATACTTCCTTAGTTGTTTACTATGTTGATGAACTACTGTCAAGTTGAAGTTTTGTTCTTAATATGGTGAATCATCATAACTCTTGAAATTGGGGATTGAGCACTTTGTTGCTGAGAAGAACTGGTATAACTACCATAAATAACTTGGACAGAATGTAGAATTCTCTGTACTCAGTAGTCAATTCAACCTCCTACACCACATAGTTCACCTTGTCGATCATATCTTCTCTTCCCCAAACACGCAACTGCTAAGCTGATCCTTTTTTCCATTCGTTCACATCCTTTGAAGTCTTTAACTGGTTTTTTTAATACCAAGAAATCTGTCTGGATCCTGCCCTTTGGACCAACTGCGGCCTTTGAAAAATGGGGATAGTGGGCCAACCTTAAAATGGCTTCTCTTTTCAATTTTTTTTTAAAAATGTGATGGGTAAGAAAATCTTTGCTACCTCTTGAGTCTTGCATCTAGATTGCTAACCCTATTGTACTTTTATCAAATTGCTCTCTTATTGCCAAGTTCCTCAATGTAAGGTCCCTAATTAGTAATATCTATAAGTTGACTCTATATGAGAACACAACAAAGGGATTGTATCCCAAATGTTCCCTAACTGCCTTTCTAATTAGGAAGGTTTTCCATATGGATGGGCATTCAAGAATTGTCTAGATATGACCTGATTCATTGCAGACATCCAAAGAAAACATATTCTAGATATCTTTGGCTGCCTCATAGTGTAGAAAAAGCTGTTTACTGATTTTGCTCATGGAATGCACATGTAGTTGCCGCTGCTCCACATATTCGCCCTTTTGTTGTTTGATAATCTTGAGTTATTACAAGTTCCATACTATTGTCCACCCAAAGAAGGCTACTTTTATGGCAGATTTTGTCTTCCGGATGAACTTCCACGGAGGTTCAACATTTACCGTCCTGCCTCAATAGTGTACACCGATTAAATGGAAAAGGATTTCACTGGGAAAGACTACCTTTTCCTTCTGTCAAGATCAGTCTGTTAGGTTCCGAGTTTATGACTTAGATCAGTGACAAGTAAAAGTGAAAATCTATTTTTGGAATAGTGGACAAGTAATAGTGAAAATCTATTTTGGAATAGTGGACAAATAATAGTGAACAGAGTACTTTTTTTTATTTTTACATAGTTACATTGAGTTCACACCTTCCAGTTATAGTTATCCTCGTTGAAAATGTAAATGACTTTGTTTGGCACTTGTTGCTAGATAGTAGATTGTTACTCCTTGGATCAAATGATCAGTTCACACGGGTTTAAGCTACTCGTAGAAAAGTTAATAGAAAAAATATGTATCATGAACAAGACTTTATATTTTACACCATCTGTTTCAATGTATGTGAAACTCTTTCCATTTTGGGGATATTCTAAAATGTTTGACATGCTTCCTCCTATATTATTACTTTATACATCTTTTGTGAATCTTAATTCATTTAACTATTCAAATCTTAAACTTTGATGTGATCCATACTAAAATTTCAAACACAATTACTGTTATTATACCTAAGTTAAAGCAACATCCTGAACTCCGTATCTAGTACTGTCTATTCAAGCTTGCAACCAGATGCTAGACAAGACATGAACTTCACACCTCTTGCTGTGTCTAGATTAAGTTTTTTGGAATTTACTTCAGCCTTCATCTCTTCATCTCGAAGACAATTTTGAGCACTGAATGCAATTGCTGTCATCATGGTTCGTGCCAAGTTTTGATTCATACTGAATGGAGACTAACAAGTTGCATTGTTTTATTATTACAGAAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAGATGTGGTTTTCAATTGCATCTACTTAGTAATCATTGCAGAGTGTGCAGGAGAGGCGTAGTATGTGATACTTTTAGGGCATAATTTGACAGGTAAAAAATGGA</genome_strand>
        <mrna_strand>AAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGCCATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAAAA........................................................................................AAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E217606" ref_strand="+" ref_description="SGN-E217606 [cLEL-25-M3](-)">
      <seq>ggaatttcctcaatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggattgaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgttgtagaagcatacaagagcggagagttgcaagaattgctagaaaggacattgtgctcctgatggattcagatgtaataagcccattattaaattgtatggactatcaggtgtctgttgttcttactgcagatgatgaaaatattttactatgtttatttcctcttcaaggactgaactttaagatatgaatacatcttggaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="101476" stop="104488"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101776" g_stop="101966" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="191" r_length="191" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103990" g_stop="104189" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="391" r_length="200" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104190" i_stop="104277" i_length="88">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.712" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104278" g_stop="104289" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="403" r_length="12" r_score="0.583"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E217606" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>403</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E217606" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101776" e_stop="101966"/>
          <exon e_start="103990" e_stop="104189"/>
          <exon e_start="104278" e_stop="104289"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAGGTAGGTATACAAATTGATACTTCAATATGCATCAGAACTTTTGAATTATTTGCACCCCTCGACTCTTTATGTGTACCTGCTACCTCCCACCAACACAGTTACAAGTAACTTTGCCCATCAAAGTTGAGGTAGATGGGAAGAGATCATCTAGTGTCTTTTGTGTTTGCCTGGATTCTAATCTTGGTCCCTAAGAACAGTTTTTTGTGTTTTTAGGTTATGTTACCAAACTGGAAGGTGTAGTACATGGTTTATACTTCCTTAGTTGTTTACTATGTTGATGAACTACTGTCAAGTTGAAGTTTTGTTCTTAATATGGTGAATCATCATAACTCTTGAAATTGGGGATTGAGCACTTTGTTGCTGAGAAGAACTGGTATAACTACCATAAATAACTTGGACAGAATGTAGAATTCTCTGTACTCAGTAGTCAATTCAACCTCCTACACCACATAGTTCACCTTGTCGATCATATCTTCTCTTCCCCAAACACGCAACTGCTAAGCTGATCCTTTTTTCCATTCGTTCACATCCTTTGAAGTCTTTAACTGGTTTTTTTAATACCAAGAAATCTGTCTGGATCCTGCCCTTTGGACCAACTGCGGCCTTTGAAAAATGGGGATAGTGGGCCAACCTTAAAATGGCTTCTCTTTTCAATTTTTTTTTAAAAATGTGATGGGTAAGAAAATCTTTGCTACCTCTTGAGTCTTGCATCTAGATTGCTAACCCTATTGTACTTTTATCAAATTGCTCTCTTATTGCCAAGTTCCTCAATGTAAGGTCCCTAATTAGTAATATCTATAAGTTGACTCTATATGAGAACACAACAAAGGGATTGTATCCCAAATGTTCCCTAACTGCCTTTCTAATTAGGAAGGTTTTCCATATGGATGGGCATTCAAGAATTGTCTAGATATGACCTGATTCATTGCAGACATCCAAAGAAAACATATTCTAGATATCTTTGGCTGCCTCATAGTGTAGAAAAAGCTGTTTACTGATTTTGCTCATGGAATGCACATGTAGTTGCCGCTGCTCCACATATTCGCCCTTTTGTTGTTTGATAATCTTGAGTTATTACAAGTTCCATACTATTGTCCACCCAAAGAAGGCTACTTTTATGGCAGATTTTGTCTTCCGGATGAACTTCCACGGAGGTTCAACATTTACCGTCCTGCCTCAATAGTGTACACCGATTAAATGGAAAAGGATTTCACTGGGAAAGACTACCTTTTCCTTCTGTCAAGATCAGTCTGTTAGGTTCCGAGTTTATGACTTAGATCAGTGACAAGTAAAAGTGAAAATCTATTTTTGGAATAGTGGACAAGTAATAGTGAAAATCTATTTTGGAATAGTGGACAAATAATAGTGAACAGAGTACTTTTTTTTATTTTTACATAGTTACATTGAGTTCACACCTTCCAGTTATAGTTATCCTCGTTGAAAATGTAAATGACTTTGTTTGGCACTTGTTGCTAGATAGTAGATTGTTACTCCTTGGATCAAATGATCAGTTCACACGGGTTTAAGCTACTCGTAGAAAAGTTAATAGAAAAAATATGTATCATGAACAAGACTTTATATTTTACACCATCTGTTTCAATGTATGTGAAACTCTTTCCATTTTGGGGATATTCTAAAATGTTTGACATGCTTCCTCCTATATTATTACTTTATACATCTTTTGTGAATCTTAATTCATTTAACTATTCAAATCTTAAACTTTGATGTGATCCATACTAAAATTTCAAACACAATTACTGTTATTATACCTAAGTTAAAGCAACATCCTGAACTCCGTATCTAGTACTGTCTATTCAAGCTTGCAACCAGATGCTAGACAAGACATGAACTTCACACCTCTTGCTGTGTCTAGATTAAGTTTTTTGGAATTTACTTCAGCCTTCATCTCTTCATCTCGAAGACAATTTTGAGCACTGAATGCAATTGCTGTCATCATGGTTCGTGCCAAGTTTTGATTCATACTGAATGGAGACTAACAAGTTGCATTGTTTTATTATTACAGAAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAGATGTGGTTTTCAATTGCATCTACTTAGTAATCATTGCAGAGTGTGCAGGAGAGGCGTAGTATGTGATACTTTTAGGGCATAATTTGACAGGTAAAAAATGGA</genome_strand>
        <mrna_strand>GGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAAAA........................................................................................AAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E235008" ref_strand="+" ref_description="SGN-E235008 [cLEL-6-G14](-)">
      <seq>aatgcggattctcaaatacagtggttcagatattaaaagcactaaatgcacccttcgagacactaaatatccttgaaaatgaagcacttcgtcaaggatttaaggagtattccagttggccaacctttccacaactctacattgatggagagttctttggtggctgtgacattgttgtaaaagcatacaagagcggagagttgcaagaattgctagaaaggacattgtgctcctgatggattcagatgtaataagcccattattaaattgtatggactatcaggtgtctgttgttcttactgcagatgatgaaaaaattttactatgtttatttcctcttcaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="101487" stop="104452"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101787" g_stop="101966" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="180" r_length="180" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023">
            <donor d_prob="0.961" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103990" g_stop="104170" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="361" r_length="181" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E235008" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>361</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E235008" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101787" e_stop="101966"/>
          <exon e_start="103990" e_stop="104170"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAGGTAGGTATACAAATTGATACTTCAATATGCATCAGAACTTTTGAATTATTTGCACCCCTCGACTCTTTATGTGTACCTGCTACCTCCCACCAACACAGTTACAAGTAACTTTGCCCATCAAAGTTGAGGTAGATGGGAAGAGATCATCTAGTGTCTTTTGTGTTTGCCTGGATTCTAATCTTGGTCCCTAAGAACAGTTTTTTGTGTTTTTAGGTTATGTTACCAAACTGGAAGGTGTAGTACATGGTTTATACTTCCTTAGTTGTTTACTATGTTGATGAACTACTGTCAAGTTGAAGTTTTGTTCTTAATATGGTGAATCATCATAACTCTTGAAATTGGGGATTGAGCACTTTGTTGCTGAGAAGAACTGGTATAACTACCATAAATAACTTGGACAGAATGTAGAATTCTCTGTACTCAGTAGTCAATTCAACCTCCTACACCACATAGTTCACCTTGTCGATCATATCTTCTCTTCCCCAAACACGCAACTGCTAAGCTGATCCTTTTTTCCATTCGTTCACATCCTTTGAAGTCTTTAACTGGTTTTTTTAATACCAAGAAATCTGTCTGGATCCTGCCCTTTGGACCAACTGCGGCCTTTGAAAAATGGGGATAGTGGGCCAACCTTAAAATGGCTTCTCTTTTCAATTTTTTTTTAAAAATGTGATGGGTAAGAAAATCTTTGCTACCTCTTGAGTCTTGCATCTAGATTGCTAACCCTATTGTACTTTTATCAAATTGCTCTCTTATTGCCAAGTTCCTCAATGTAAGGTCCCTAATTAGTAATATCTATAAGTTGACTCTATATGAGAACACAACAAAGGGATTGTATCCCAAATGTTCCCTAACTGCCTTTCTAATTAGGAAGGTTTTCCATATGGATGGGCATTCAAGAATTGTCTAGATATGACCTGATTCATTGCAGACATCCAAAGAAAACATATTCTAGATATCTTTGGCTGCCTCATAGTGTAGAAAAAGCTGTTTACTGATTTTGCTCATGGAATGCACATGTAGTTGCCGCTGCTCCACATATTCGCCCTTTTGTTGTTTGATAATCTTGAGTTATTACAAGTTCCATACTATTGTCCACCCAAAGAAGGCTACTTTTATGGCAGATTTTGTCTTCCGGATGAACTTCCACGGAGGTTCAACATTTACCGTCCTGCCTCAATAGTGTACACCGATTAAATGGAAAAGGATTTCACTGGGAAAGACTACCTTTTCCTTCTGTCAAGATCAGTCTGTTAGGTTCCGAGTTTATGACTTAGATCAGTGACAAGTAAAAGTGAAAATCTATTTTTGGAATAGTGGACAAGTAATAGTGAAAATCTATTTTGGAATAGTGGACAAATAATAGTGAACAGAGTACTTTTTTTTATTTTTACATAGTTACATTGAGTTCACACCTTCCAGTTATAGTTATCCTCGTTGAAAATGTAAATGACTTTGTTTGGCACTTGTTGCTAGATAGTAGATTGTTACTCCTTGGATCAAATGATCAGTTCACACGGGTTTAAGCTACTCGTAGAAAAGTTAATAGAAAAAATATGTATCATGAACAAGACTTTATATTTTACACCATCTGTTTCAATGTATGTGAAACTCTTTCCATTTTGGGGATATTCTAAAATGTTTGACATGCTTCCTCCTATATTATTACTTTATACATCTTTTGTGAATCTTAATTCATTTAACTATTCAAATCTTAAACTTTGATGTGATCCATACTAAAATTTCAAACACAATTACTGTTATTATACCTAAGTTAAAGCAACATCCTGAACTCCGTATCTAGTACTGTCTATTCAAGCTTGCAACCAGATGCTAGACAAGACATGAACTTCACACCTCTTGCTGTGTCTAGATTAAGTTTTTTGGAATTTACTTCAGCCTTCATCTCTTCATCTCGAAGACAATTTTGAGCACTGAATGCAATTGCTGTCATCATGGTTCGTGCCAAGTTTTGATTCATACTGAATGGAGACTAACAAGTTGCATTGTTTTATTATTACAGAAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATA</genome_strand>
        <mrna_strand>AATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTTAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAAAATTTTACTATGTTTATTTCCTCTTCAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E376865" ref_strand="+" ref_description="SGN-E376865 [TUS-19-B19]">
      <seq>gatctcgtcggagacgactctctccccaccgcgcactcatcgccaccgcagctttcactgtcgtcggactattgatcctaactttgaggtccgtcgatccgtccactcagcttccaatcaccacctctgaaaacgtgaatgctaagccagcagatacaaatcttcactcgaaccactccgatgctcaaccactaaaaacatgcgcaaccgtggaggagatgggcgaggtgtttcgcagcgggttttggaaggaaagttacagagtgaggaaaatcatcgaaagtcactttgctattaatggtgcttcgagagttcgatctcttccgccggaggagttctgcagacatggtttcgtgttgggaaaagcatcagaagcaggttttggtaatgagatgtacaaaatcttaactgccggagcactgagtgtgatgttgaaccggtcgttgataattgggcaatccaggcatattggggtagatttccttttgaggatttcatctcttactccaatcttaccttcacattgaaagaaatcaagcacctttggagacaaaatggttgtctgaccaaatatgggaggcatcttgttatcagaattgatgatttccagaagccagcacgaactaatgttctgtgtagcatttggagggtctgggaacaacctatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="111030" stop="109205"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110730" g_stop="110431" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="300" r_length="300" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110430" i_stop="110283" i_length="148">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110282" g_stop="110112" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="471" r_length="171" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110111" i_stop="109702" i_length="410">
            <donor d_prob="0.915" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="109701" g_stop="109505" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="668" r_length="197" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E376865" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>668</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E376865" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110730" e_stop="110431"/>
          <exon e_start="110282" e_stop="110112"/>
          <exon e_start="109701" e_stop="109505"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTCGTCGGAGACGACTCTCTCCCCACCGCGCACTCATCGCCACCGCAGCTTTCACTGTCGTCGGACTATTGATCCTAACTTTGAGGTCCGTCGATCCGTCCACTCAGCTTCCAATCACCACCTCTGAAAACGTGAATGCTAAGCCAGCAGATACAAATCTTCACTCGAACCACTCCGATGCTCAACCACTAAAAACATGCGCAACCGTGGAGGAGATGGGCGAGGTGTTTCGCAGCGGGTTTTGGAAGGAAAGTTACAGAGTGAGGAAAATCATCGAAAGTCACTTTGCTATTAATGGTACTATTAAACTACATTTCATGCTATTTTATTGTTATCTATTCGATTTGTGAACCGAAGTTGTACTTATTTTTCCATGAAATTACTGGAAGAACTGTTATATGTTTGGACAATTAAGGAACACTAATAATTGTTTGTTTTTCTACAGGTGCTTCGAGAGTTCGAGCTCTTCCGCCGGAGGAGTTCTGCAGACATGGTTTCGTGTTGGGAAAAGCATCAGAAGCAGGTTTTGGTAATGAGATGTACAAAATCTTAACTGCCGGAGCACTGAGTGTGATGTTGAACCGGTCGTTGATAATTGGGCAATCCAGGCATATTGGTTCTCTCTCAAGCCTTTCTATTTGTACTGTTTGTTGTATGTGTTTAGTTTCGGATTCCATATTTGTTGTTTCTTTCCCTCGTAGTTTTGATATTGAACTATTTCAGTCCACTTGGAAGCTACCCTCAATATAGATGCAGGGAATAACCAGTCCCTTTTGCATTTGCGCTTTCAGAAATATCTTTTATCTTATTCCAGTAGAATAACATGTCTTAATAGAAACACGATTTTGCTTCATTAGTGAGAAACTATTAAACACACACAAATGTACACATATGTATGCATTATATAGGTGAAGGTCTGTTTCTTCGCTCTAATAAATAAGTACTGATCATGCATTGCTCAAATTCTGCCTTAGTACTCCAGAAATATCTTCTTTATGTCTAATTTTTGCATTTTCAAAACTTCAGGGGTAGATTTCCTTTTGAGGATTTCATCTCTTACTCCAATCTTACCTTCACATTGAAAGAAATCAAGCACCTTTGGAGACAAAATGGTTGTCTGACCAAATATGGGAGGCATCTTGTTATCAGAATTGATGATTTCCAGAAGCCAGCACGAACTAATGTTCTGTGTAGCAATTGGAGGGTCTGGGAACAACCTATTA</genome_strand>
        <mrna_strand>GATCTCGTCGGAGACGACTCTCTCCCCACCGCGCACTCATCGCCACCGCAGCTTTCACTGTCGTCGGACTATTGATCCTAACTTTGAGGTCCGTCGATCCGTCCACTCAGCTTCCAATCACCACCTCTGAAAACGTGAATGCTAAGCCAGCAGATACAAATCTTCACTCGAACCACTCCGATGCTCAACCACTAAAAACATGCGCAACCGTGGAGGAGATGGGCGAGGTGTTTCGCAGCGGGTTTTGGAAGGAAAGTTACAGAGTGAGGAAAATCATCGAAAGTCACTTTGCTATTAATG....................................................................................................................................................GTGCTTCGAGAGTTCGATCTCTTCCGCCGGAGGAGTTCTGCAGACATGGTTTCGTGTTGGGAAAAGCATCAGAAGCAGGTTTTGGTAATGAGATGTACAAAATCTTAACTGCCGGAGCACTGAGTGTGATGTTGAACCGGTCGTTGATAATTGGGCAATCCAGGCATATTG..........................................................................................................................................................................................................................................................................................................................................................................................................................GGGTAGATTTCCTTTTGAGGATTTCATCTCTTACTCCAATCTTACCTTCACATTGAAAGAAATCAAGCACCTTTGGAGACAAAATGGTTGTCTGACCAAATATGGGAGGCATCTTGTTATCAGAATTGATGATTTCCAGAAGCCAGCACGAACTAATGTTCTGTGTAGCATTTGGAGGGTCTGGGAACAACCTATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E231693" ref_strand="+" ref_description="SGN-E231693 [cLED-4-O18]">
      <seq>gatctcgtcggagacgactctctccccaccgcgcactcatcgccaccgcagctttcactgtcgtcggactattgatcctaactttgaggtccgtcgatccgtccactcagcttccaatcaccacctctgaaaacgtgaatgctaagccagcagatacaaatcttcactcgaaccactccgatgctcaaccactaaaaacatgcgcaaccgtggaggagatgggcgaggtgtttcgcagcgggttttggaaggaaagttacagagtgaggaaaatcatcgaaagtcactttgctattaatggtgcttcgagagttcgatctcttccgccggaggagttctgcagacatggtttcgtgttgggaaaagcatcagaagcaggttttggtaatgagatgtacaaaatcttaactgccggagcactgagtgtgatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="111030" stop="109851"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110730" g_stop="110431" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="300" r_length="300" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110430" i_stop="110283" i_length="148">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110282" g_stop="110151" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="432" r_length="132" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E231693" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>432</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E231693" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110730" e_stop="110431"/>
          <exon e_start="110282" e_stop="110151"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTCGTCGGAGACGACTCTCTCCCCACCGCGCACTCATCGCCACCGCAGCTTTCACTGTCGTCGGACTATTGATCCTAACTTTGAGGTCCGTCGATCCGTCCACTCAGCTTCCAATCACCACCTCTGAAAACGTGAATGCTAAGCCAGCAGATACAAATCTTCACTCGAACCACTCCGATGCTCAACCACTAAAAACATGCGCAACCGTGGAGGAGATGGGCGAGGTGTTTCGCAGCGGGTTTTGGAAGGAAAGTTACAGAGTGAGGAAAATCATCGAAAGTCACTTTGCTATTAATGGTACTATTAAACTACATTTCATGCTATTTTATTGTTATCTATTCGATTTGTGAACCGAAGTTGTACTTATTTTTCCATGAAATTACTGGAAGAACTGTTATATGTTTGGACAATTAAGGAACACTAATAATTGTTTGTTTTTCTACAGGTGCTTCGAGAGTTCGAGCTCTTCCGCCGGAGGAGTTCTGCAGACATGGTTTCGTGTTGGGAAAAGCATCAGAAGCAGGTTTTGGTAATGAGATGTACAAAATCTTAACTGCCGGAGCACTGAGTGTGATGT</genome_strand>
        <mrna_strand>GATCTCGTCGGAGACGACTCTCTCCCCACCGCGCACTCATCGCCACCGCAGCTTTCACTGTCGTCGGACTATTGATCCTAACTTTGAGGTCCGTCGATCCGTCCACTCAGCTTCCAATCACCACCTCTGAAAACGTGAATGCTAAGCCAGCAGATACAAATCTTCACTCGAACCACTCCGATGCTCAACCACTAAAAACATGCGCAACCGTGGAGGAGATGGGCGAGGTGTTTCGCAGCGGGTTTTGGAAGGAAAGTTACAGAGTGAGGAAAATCATCGAAAGTCACTTTGCTATTAATG....................................................................................................................................................GTGCTTCGAGAGTTCGATCTCTTCCGCCGGAGGAGTTCTGCAGACATGGTTTCGTGTTGGGAAAAGCATCAGAAGCAGGTTTTGGTAATGAGATGTACAAAATCTTAACTGCCGGAGCACTGAGTGTGATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E331390" ref_strand="+" ref_description="SGN-E331390 [cTOD-9-O10]">
      <seq>aaaagacttatgttatatgcccaacttttaagtcctcaacactcgcctgcggtttaacccatcgcttcgacctctctgcgactgatcgctgtttctctcaacttcgactccacttttgccggcggccttatcggcgagatctttaatcaggaagcggtcctttgtgaccatgggcaccgaatatcccaatcggccaacctttccctcaaggcctgctgctacaccttttggtgttccgcagagtacaactccttttcaatcatctcgtccagtggttggatctgatgcttctgcttttcggcctgctcctcctacttcttctccggctatgccacctccttcctcatctggacccatggttggaccagggatatcttcttttagaccgatgccacccgggatgcctaatgatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="114074" stop="115902"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114374" g_stop="114523" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="150" r_length="150" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="114524" i_stop="115338" i_length="815">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="115339" g_stop="115602" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="414" r_length="264" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E331390" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>414</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331390" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114374" e_stop="114523"/>
          <exon e_start="115339" e_stop="115602"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGACTTATGTTATATGCCCAACTTTTAACTCCTCAACACTCGCCTGCGGTTTAACCCATCGCTTCGACCTCTCTGCGACTGATCGCTGTTTCTCTCAACTTCGACTCCACTTTTGCCGGCGGCCTTATCGGCGAGATCTTTAATCAGGTAATTTTCCATATACTCCAAATCGACGACTTCTATGCCAATTTCGCGTTGATTGTGCGATTTCGAACTGTTGTTTTCGACATCAGAGATTGGATTTCATTTTTTATTGGAATTTGATAATGCGTTAATTTTGATCTTTTGAGATCAGATGCTGACTTCTATTGTTGAGTTATTAGTTTGATTTATATTCTGCATTAATTTGGCTACTTACTCTTGTTAGTTTGATTCGAAAAAAGGATATGCACATCAACATCAGAATTGAGTGTTGCTCTAGATTGAGAATTTACCGATATTGTTTTTATTTAACTGTTTTGTCCTCTATTATGATGGAATAGAGATTGCTGGAACAACATTAGTGCTAGGGATCAAAGGAAGTTATTAGAATTGAGGCAAACCTTGTTCTGATTTGGCTTCTATTGAGTGTTTTCTACTTGTTTTAGTTACTAGAAACTAGATTCTATGTGCTGTAGGCACCTAAAGGAAGTGGAACTGAGTTCTGACCTTCTTATGTGTTCCTTTCCCATGTCCTTCATTCTCCCAACCATTCCTTATTTGCTGGGAAAACTCAACAGACTGCTCATTATGAAATGGAAAAGGTCTTTAGTAAGTATTTATCTTCTTAGACAGAGTTGCGTATCTTCTTCTCCTTATCTCTGTTTTATTCCTTTTCTATTCCTGGGTTGCAAATATTTGTTTCCCTACTATTTTTGGCTAATGTATTTAGTCTTGCATTATTTTTATCTTTTTGTGCTTTAATGTTGATTTTTGTGGTAATGACATGTTTTATTGATTTTTGTTGGTGGATTAAACTTCAGGAAGCGGTCCTTTGTGACCATGGGCACCGAATATCCCAATCGGCCAACCTTTCCCTCAAGGCCTGCTGCTACACCTTTTGGTGTTCCGCAGAGTACAACTCCTTTTCAATCATCTCGTCCAGTGGTTGGATCTGATGCTTCTGCTTTTCGGCCTGCTCCTCCTACTTCTTCTCCGGCTATGCCACCTCCTTCCTCATCTGGACCCATGGTTGGACCAGGGATATCTTCTTTTAGACCGATGCCACCCGGGATGCCTAATGATGC</genome_strand>
        <mrna_strand>AAAAGACTTATGTTATATGCCCAACTTTTAAGTCCTCAACACTCGCCTGCGGTTTAACCCATCGCTTCGACCTCTCTGCGACTGATCGCTGTTTCTCTCAACTTCGACTCCACTTTTGCCGGCGGCCTTATCGGCGAGATCTTTAATCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCGGTCCTTTGTGACCATGGGCACCGAATATCCCAATCGGCCAACCTTTCCCTCAAGGCCTGCTGCTACACCTTTTGGTGTTCCGCAGAGTACAACTCCTTTTCAATCATCTCGTCCAGTGGTTGGATCTGATGCTTCTGCTTTTCGGCCTGCTCCTCCTACTTCTTCTCCGGCTATGCCACCTCCTTCCTCATCTGGACCCATGGTTGGACCAGGGATATCTTCTTTTAGACCGATGCCACCCGGGATGCCTAATGATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E545875" ref_strand="+" ref_description="SGN-E545875 [TUS-68-P5]">
      <seq>cgcttcgacctctctgcgactgatcgccgtttctctcaacttcgcctccacttttaccggcggccttatcggcgagatctttaatcaggaagcggtcctttgtgaccatgggcaccgaatatcccaatcggccaacctttccctcaaggcctgctgctacaccttttggtgttccgcagagtacaactccttttcaatcatctcgtccggtggttggttctgatgcttctgcttttcggcctgctcctcctacttcttctccgcccatgccacctccttcctcatctggacccatggttggaccagggttctcttcttttagaccgatgccacccgggatgcctaatgatgcagggaggccacctccaacatcaacacctccatatgggccgacagtcactggccctttcccacgtttcccctcaccgcagtttccttctacagctcaggtaccacctccacgcacttcgatgccgggccagcctgttgtagcagccccagttagacctgtttcagggcctttctcaacactcctggtgcccatcatccacaaatcccaactcctactggtccgatggggatctctcctcaaggtgcaagtacagtgcagcctagtccaaatgttcatcagggtcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="114136" stop="116187"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114436" g_stop="114523" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="114524" i_stop="115338" i_length="815">
            <donor d_prob="0.978" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="115339" g_stop="115887" g_length="549"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="636" r_length="548" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E545875" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>637</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E545875" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114436" e_stop="114523"/>
          <exon e_start="115339" e_stop="115887"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCTTCGACCTCTCTGCGACTGATCGCTGTTTCTCTCAACTTCGACTCCACTTTTGCCGGCGGCCTTATCGGCGAGATCTTTAATCAGGTAATTTTCCATATACTCCAAATCGACGACTTCTATGCCAATTTCGCGTTGATTGTGCGATTTCGAACTGTTGTTTTCGACATCAGAGATTGGATTTCATTTTTTATTGGAATTTGATAATGCGTTAATTTTGATCTTTTGAGATCAGATGCTGACTTCTATTGTTGAGTTATTAGTTTGATTTATATTCTGCATTAATTTGGCTACTTACTCTTGTTAGTTTGATTCGAAAAAAGGATATGCACATCAACATCAGAATTGAGTGTTGCTCTAGATTGAGAATTTACCGATATTGTTTTTATTTAACTGTTTTGTCCTCTATTATGATGGAATAGAGATTGCTGGAACAACATTAGTGCTAGGGATCAAAGGAAGTTATTAGAATTGAGGCAAACCTTGTTCTGATTTGGCTTCTATTGAGTGTTTTCTACTTGTTTTAGTTACTAGAAACTAGATTCTATGTGCTGTAGGCACCTAAAGGAAGTGGAACTGAGTTCTGACCTTCTTATGTGTTCCTTTCCCATGTCCTTCATTCTCCCAACCATTCCTTATTTGCTGGGAAAACTCAACAGACTGCTCATTATGAAATGGAAAAGGTCTTTAGTAAGTATTTATCTTCTTAGACAGAGTTGCGTATCTTCTTCTCCTTATCTCTGTTTTATTCCTTTTCTATTCCTGGGTTGCAAATATTTGTTTCCCTACTATTTTTGGCTAATGTATTTAGTCTTGCATTATTTTTATCTTTTTGTGCTTTAATGTTGATTTTTGTGGTAATGACATGTTTTATTGATTTTTGTTGGTGGATTAAACTTCAGGAAGCGGTCCTTTGTGACCATGGGCACCGAATATCCCAATCGGCCAACCTTTCCCTCAAGGCCTGCTGCTACACCTTTTGGTGTTCCGCAGAGTACAACTCCTTTTCAATCATCTCGTCCAGTGGTTGGATCTGATGCTTCTGCTTTTCGGCCTGCTCCTCCTACTTCTTCTCCGGCTATGCCACCTCCTTCCTCATCTGGACCCATGGTTGGACCAGGGATATCTTCTTTTAGACCGATGCCACCCGGGATGCCTAATGATGCAGGGAGGCCACCTCCAACATCAACACCTCCATATGGGCCGACAGTCTCTGGCCCTTTCCCACGTTTCCCCTCACCGCAGTTTCCTTCTACAGCTCAGGTACCACCTCCACGCACTTCGATGCCGGGGCAGCCGGTTGTAGCAGCCCCTGTTAGACCTGTTTCAGGGCCTTTCTCAACACCTCCTGGTGCCCATCATCCACAAATCCAACCTCCTACTGTTCCGATGGGATCGCCTCCTCAAGGTGCAAGTACAGTGCAGCCTAGTCCAAATGTTTATCAGGGTCC</genome_strand>
        <mrna_strand>CGCTTCGACCTCTCTGCGACTGATCGCCGTTTCTCTCAACTTCGCCTCCACTTTTACCGGCGGCCTTATCGGCGAGATCTTTAATCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCGGTCCTTTGTGACCATGGGCACCGAATATCCCAATCGGCCAACCTTTCCCTCAAGGCCTGCTGCTACACCTTTTGGTGTTCCGCAGAGTACAACTCCTTTTCAATCATCTCGTCCGGTGGTTGGTTCTGATGCTTCTGCTTTTCGGCCTGCTCCTCCTACTTCTTCTCCGCCCATGCCACCTCCTTCCTCATCTGGACCCATGGTTGGACCAGGGTTCTCTTCTTTTAGACCGATGCCACCCGGGATGCCTAATGATGCAGGGAGGCCACCTCCAACATCAACACCTCCATATGGGCCGACAGTCACTGGCCCTTTCCCACGTTTCCCCTCACCGCAGTTTCCTTCTACAGCTCAGGTACCACCTCCACGCACTTCGATGCCGGGCCAGCCTGTTGTAGCAGCCCCAGTTAGACCTGTTTCAGGGCCTTTCTCAACA-CTCCTGGTGCCCATCATCCACAAATCCCAACTCCTACTGGTCCGATGGGGATCTCTCCTCAAGGTGCAAGTACAGTGCAGCCTAGTCCAAATGTTCATCAGGGTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E356100" ref_strand="+" ref_description="SGN-E356100 [cLHT-7-I3]">
      <seq>gcttcgacctctctgcgactgatcgccgtttctctcaacttcgcctccacttttaccggcggccttatcggcgagatctttaatcaggaagcggtcctttgtgaccatgggcaccgaatatcccaatcggccaacctttccctcaaggcctgctgctacaccttttggtgttccgcagagtacaactccttttcaatcatctcgtgcggtggttggttctgatgcttctgcttttcggcctgctcctcctacttcttctccgcccatgccacctccttcctcatctggacccatggttggaccagggttctcttcttttagaccgatgccacccgggatgcctaatgatgcagggaggccacctccaacatcaacacctccatatgggccgacagtcactggccctttcccacgtttcccctcaccgcagtttccttctacagctcaggtaccacctncacgcacttcgatgccgggccag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="114137" stop="116032"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114437" g_stop="114523" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="87" r_length="87" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="114524" i_stop="115338" i_length="815">
            <donor d_prob="0.978" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="115339" g_stop="115732" g_length="394"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="481" r_length="394" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E356100" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356100" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114437" e_stop="114523"/>
          <exon e_start="115339" e_stop="115732"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTCGACCTCTCTGCGACTGATCGCTGTTTCTCTCAACTTCGACTCCACTTTTGCCGGCGGCCTTATCGGCGAGATCTTTAATCAGGTAATTTTCCATATACTCCAAATCGACGACTTCTATGCCAATTTCGCGTTGATTGTGCGATTTCGAACTGTTGTTTTCGACATCAGAGATTGGATTTCATTTTTTATTGGAATTTGATAATGCGTTAATTTTGATCTTTTGAGATCAGATGCTGACTTCTATTGTTGAGTTATTAGTTTGATTTATATTCTGCATTAATTTGGCTACTTACTCTTGTTAGTTTGATTCGAAAAAAGGATATGCACATCAACATCAGAATTGAGTGTTGCTCTAGATTGAGAATTTACCGATATTGTTTTTATTTAACTGTTTTGTCCTCTATTATGATGGAATAGAGATTGCTGGAACAACATTAGTGCTAGGGATCAAAGGAAGTTATTAGAATTGAGGCAAACCTTGTTCTGATTTGGCTTCTATTGAGTGTTTTCTACTTGTTTTAGTTACTAGAAACTAGATTCTATGTGCTGTAGGCACCTAAAGGAAGTGGAACTGAGTTCTGACCTTCTTATGTGTTCCTTTCCCATGTCCTTCATTCTCCCAACCATTCCTTATTTGCTGGGAAAACTCAACAGACTGCTCATTATGAAATGGAAAAGGTCTTTAGTAAGTATTTATCTTCTTAGACAGAGTTGCGTATCTTCTTCTCCTTATCTCTGTTTTATTCCTTTTCTATTCCTGGGTTGCAAATATTTGTTTCCCTACTATTTTTGGCTAATGTATTTAGTCTTGCATTATTTTTATCTTTTTGTGCTTTAATGTTGATTTTTGTGGTAATGACATGTTTTATTGATTTTTGTTGGTGGATTAAACTTCAGGAAGCGGTCCTTTGTGACCATGGGCACCGAATATCCCAATCGGCCAACCTTTCCCTCAAGGCCTGCTGCTACACCTTTTGGTGTTCCGCAGAGTACAACTCCTTTTCAATCATCTCGTCCAGTGGTTGGATCTGATGCTTCTGCTTTTCGGCCTGCTCCTCCTACTTCTTCTCCGGCTATGCCACCTCCTTCCTCATCTGGACCCATGGTTGGACCAGGGATATCTTCTTTTAGACCGATGCCACCCGGGATGCCTAATGATGCAGGGAGGCCACCTCCAACATCAACACCTCCATATGGGCCGACAGTCTCTGGCCCTTTCCCACGTTTCCCCTCACCGCAGTTTCCTTCTACAGCTCAGGTACCACCTCCACGCACTTCGATGCCGGGGCAG</genome_strand>
        <mrna_strand>GCTTCGACCTCTCTGCGACTGATCGCCGTTTCTCTCAACTTCGCCTCCACTTTTACCGGCGGCCTTATCGGCGAGATCTTTAATCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCGGTCCTTTGTGACCATGGGCACCGAATATCCCAATCGGCCAACCTTTCCCTCAAGGCCTGCTGCTACACCTTTTGGTGTTCCGCAGAGTACAACTCCTTTTCAATCATCTCGTGCGGTGGTTGGTTCTGATGCTTCTGCTTTTCGGCCTGCTCCTCCTACTTCTTCTCCGCCCATGCCACCTCCTTCCTCATCTGGACCCATGGTTGGACCAGGGTTCTCTTCTTTTAGACCGATGCCACCCGGGATGCCTAATGATGCAGGGAGGCCACCTCCAACATCAACACCTCCATATGGGCCGACAGTCACTGGCCCTTTCCCACGTTTCCCCTCACCGCAGTTTCCTTCTACAGCTCAGGTACCACCTNCACGCACTTCGATGCCGGGCCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E339564" ref_strand="+" ref_description="SGN-E339564 [cTOE-16-K24]">
      <seq>aatgtttatcagggtcccatgcagtcccagttttctgctgccagagcaacctcacagccatcttcccctttagcaggttcagcttatcctgctgctagacctggctttcaatctggttttccaggatatataagtcagcaaccttcagggtttgcacaagctccccctagacaatcagtaccatttccttctcagcctggcggctatgttccaccagtgccagcagcttctagcccctatctttctcaacaaggagggtttgcaccaccaccaccacctctaacatctcaacgtccaggatctatgcctcctacatctgctatgcaaggtttggtggaagacttcagttccttctcaattgggtctgttccaggatcatttgattccggccttgactctaaggttctaccaagaccaattgatgttgatgttgagcggaatgttttgtctgagatgtatcccatgaactgcagttcaagatttttgaggctcacaactagtggcataccaaattctcagtctttggcttcaaggtggcacttatctcttgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="115571" stop="116722"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115871" g_stop="116422" g_length="552"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="552" r_length="552" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E339564" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E339564" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115871" e_stop="116422"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGTTTATCAGGGTCCCATGCAGTCCCAGTTTTCTGCTGCCAGAGCAACCTCACAGCCATCTTCCCCTTTAGCAGGTTCAGCTTATCCTGCTGCTAGACCTGGCTTTCAATCTGGTTTTCCAGGATATATAAGTCAGCAACCTTCAGGGTTTGCACAAGCTCCCCCTAGACAATCAGTACCATTTCCTTCTCAGCCTGGCGGCTATGTTCCACCAGTGCCAGCAGCTTCTAGCCCCTATCTTTCTCAACAAGGAGGGTTTGCACCACCACCACCACCTCTAACATCTCAACGTCCAGGATCTATGCCTCCTACATCTGCTATGCAAGGTTTGGTGGAAGACTTCAGTTCCTTCTCAATTGGGTCTGTTCCAGGATCATTTGATTCCGGCCTTGACTCTAAGGTTCTACCAAGACCAATTGATGTTGATGTTGAGCGGAATGTTTTGTCTGAGATGTATCCCATGAACTGCAGTTCAAGATTTTTGAGGCTCACAACTAGTGGCATACCAAATTCTCAGTCTTTGGCTTCAAGGTGGCACTTATCTCTTGGA</genome_strand>
        <mrna_strand>AATGTTTATCAGGGTCCCATGCAGTCCCAGTTTTCTGCTGCCAGAGCAACCTCACAGCCATCTTCCCCTTTAGCAGGTTCAGCTTATCCTGCTGCTAGACCTGGCTTTCAATCTGGTTTTCCAGGATATATAAGTCAGCAACCTTCAGGGTTTGCACAAGCTCCCCCTAGACAATCAGTACCATTTCCTTCTCAGCCTGGCGGCTATGTTCCACCAGTGCCAGCAGCTTCTAGCCCCTATCTTTCTCAACAAGGAGGGTTTGCACCACCACCACCACCTCTAACATCTCAACGTCCAGGATCTATGCCTCCTACATCTGCTATGCAAGGTTTGGTGGAAGACTTCAGTTCCTTCTCAATTGGGTCTGTTCCAGGATCATTTGATTCCGGCCTTGACTCTAAGGTTCTACCAAGACCAATTGATGTTGATGTTGAGCGGAATGTTTTGTCTGAGATGTATCCCATGAACTGCAGTTCAAGATTTTTGAGGCTCACAACTAGTGGCATACCAAATTCTCAGTCTTTGGCTTCAAGGTGGCACTTATCTCTTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E538021" ref_strand="+" ref_description="SGN-E538021 [TUS-56-O19]">
      <seq>ctgcagttcaagatttttgaggctcacaactagtggcataccaaattctcagtctttggcttcaaggtggcacttatctcttggagcagttgtttgtcctctcgccgaggcatcagatggggaagaagttcctgtggttaattttgccccaactggtatcatccgctgtagaaggtgtcgcacttatgtaaatccttatgtgacattcaccgacagtggaagaaagtggagatgtaatatatgtgcattgcttaatgaagttcctggtgaatatttcgcacatttggatgccagtggcagaagagttgacttggatcaaaggcctgaacttaccaaaggtagcgtggagtttattgctccagctgagtacatggtccggcctccgatgcctcccctgtacttttttctcattgatgtatctttgactgctgtgagaagtggaatgcttgaggttttagcacaaaccatcaagaacagtttggacagcttgcctggatttccaagaacacagatcgggtttataacatatgacagtacagtacacttttataacatgaagtcatccttgactcaacctcaaatgatggtcatgtcagatcttgaagatgtatttgtgccattgccagatgatcttcttgtcaacttgtcagaatcaagaactgtggtagatgcatttctagacagccttccttctatgtttcaggataatgcgaatgtggaatcagcttttggtccagctcttaaacagccttcatggttatgaacaaacttggcggtaaattgctgatctttcaaagcagtcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="116038" stop="118908"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116338" g_stop="116458" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116459" i_stop="116562" i_length="104">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.791" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="116563" g_stop="116701" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="260" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="116702" i_stop="117421" i_length="720">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="117422" g_stop="117612" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="451" r_length="191" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="117613" i_stop="118016" i_length="404">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.836" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="118017" g_stop="118124" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="559" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="118125" i_stop="118214" i_length="90">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.897" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="118215" g_stop="118418" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="560" r_stop="762" r_length="203" r_score="0.990"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="118419" i_stop="118565" i_length="147">
            <donor d_prob="0.976" d_score="0.98"/>
            <acceptor a_prob="0.866" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="118566" g_stop="118608" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="763" r_stop="805" r_length="43" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E538021" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>806</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E538021" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116338" e_stop="116458"/>
          <exon e_start="116563" e_stop="116701"/>
          <exon e_start="117422" e_stop="117612"/>
          <exon e_start="118017" e_stop="118124"/>
          <exon e_start="118215" e_stop="118418"/>
          <exon e_start="118566" e_stop="118608"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCAGTTCAAGATTTTTGAGGCTCACAACTAGTGGCATACCAAATTCTCAGTCTTTGGCTTCAAGGTGGCACTTATCTCTTGGAGCAGTTGTTTGTCCTCTCGCCGAGGCATCAGATGGGGTATGTATTCATGACATAGTACTCTTTTCATATTCTGGATAGTTACAGTTTAAGGGTTTCATGTGAATCTCACTTGCTCTACGTGCAAAATCTACATCATGCAGGAAGAAGTTCCTGTGGTTAATTTTGCCCCAACTGGTATCATCCGCTGTAGAAGGTGTCGCACTTATGTAAATCCTTATGTGACATTCACCGACAGTGGAAGAAAGTGGAGATGTAATATATGTGCATTGCTTAATGAAGGTAAGTACTGTCACTACTGATATTGCTTCAGGTCTTGAGTTTTTAACAAGTATATTTTGGTTTTAGTATACTTTAAAAGTTTTAGTTAGGTGTAGCTAGAATAGTTGAATTCCTTCTTGAATATTCTGTTGCGTTTTTGCATTGATTAACTTCCTAATATGTGGGTAGATGGGTTAAGGCCGCGAGAGAGATGGAGGGAAGTGGATTAATGTGCATGAGGCTGGCACCGTAATATGTCGAATGCATGCATCCCGATTTTGGAAATAACCTTAACCTTGAAATAAGTAATGGTAGAAGGTCAGATGATTAATGAGTAAATGCCTAAATAAAATGACCCCACTTAGCTTTAATACTAAACTGTGCTATCTTATTAATGAACAAAAACTTCTATGTAGACCTTACTTTCTGCTCTTTGCATCTTTTAGCAGATTTTTTTCTACTCATTGCTCACATTCCATTCAAATTGCTGCTAAGAGAACTTTGATACTCCACCATGTCCTCTCTGATTGTGATGCTGGATTTAATTTGTCTACAATTGTTTGTTTTCATTGCCATATATGTACAAGTTAGCATTCCATGTCAGGGCCTCCCAGCTATGTTGTTGTGCTTTTTGTCACTTTAGAATCTGAAGATTCACATTTCTAATGTTGCATATTGAGGATGTAGTGTATTGTGTCCTTTTTTGAAATGCATGGGCTCATTTTTTCTCTCTATGTCTAGTTCCTGGTGAATATTTCGCACATTTGGATGCCAGTGGCAGAAGAGTTGACTTGGATCAAAGGCCTGAACTTACCAAAGGTAGCGTGGAGTTTATTGCTCCAGCTGAGTACATGGTCCGGCCTCCGATGCCTCCCCTGTACTTTTTTCTCATTGATGTATCTTTGACTGCTGTGAGAAGTGGAATGCTTGAGGTAAGAGATTTAGTTATTGAGCTTTGCAGTTTGTATCTAACTACAACAAACTACACATCAATTATGGCCACCGTCCTTTCTACATGCAAGTTAACCAACTTGGAGAGGGTTCTCTATTGGTCATTATTGTGTGGCTTATTGGTGCAAGTATTGCTGTTGCCATCTTATATTAGAATGCTTCTGAGAAATCATTCACATAGACGAGCCTGATGTTTGTATATATGAGCACGTGGGGCTCGTTTTCAAATTTTATCATTTAATTTGATATTCCATTAAGTATCAATTGCCTGTCTAGTTAAACTTCTATTTGTTGGCTACTGGAGCAATTTTTTGTAAAATAATCTGATAAATTGCAAGTTTATCTGGTATGCCCTTTGTTAATCCCTTTTATACATCTACGTCAGGTTTTAGCACAAACCATCAAGAACAGTTTGGACAGCTTGCCTGGATTTCCAAGAACACAGATCGGGTTTATAACATATGACAGTACAGTACACTTTTATAACATGAAGGCGAGTCAGCCGAATAATGATTAATCTTATTGCATAATATGAATATCCATTTACTGTTAAATAATTTAGGTTCTTTTTCTCTTGTACCAGTCATCCTTGACTCAACCTCAAATGATGGTCATGTCAGATCTTGAAGATGTATTTGTGCCATTGCCAGATGATCTTCTTGTCAACTTGTCAGAATCAAGAACTGTGGTAGATGCATTTCTAGACAGCCTTCCTTCAATGTTTCAGGATAATGCGAATGTGGAATCAGCTTTTGGTCCAGCTCTTAAAACAGCCTTCATGGTTATGGTGCGCAACCTTCTTTTTATGCTATTCACGTGATTTTCTGACATTCAAGTTCTTGGTAGCACAGAAGTTTTTCCTTTCACTTTCTGTAAATTCAGTTTTTTGCCTTATGTTGATTCACACTGACTAATATCGCCTCTCTACTTCCAGAACCAACTTGGCGGTAAATTGCTGATCTTTCAAAGCAGTCTTC</genome_strand>
        <mrna_strand>CTGCAGTTCAAGATTTTTGAGGCTCACAACTAGTGGCATACCAAATTCTCAGTCTTTGGCTTCAAGGTGGCACTTATCTCTTGGAGCAGTTGTTTGTCCTCTCGCCGAGGCATCAGATGGG........................................................................................................GAAGAAGTTCCTGTGGTTAATTTTGCCCCAACTGGTATCATCCGCTGTAGAAGGTGTCGCACTTATGTAAATCCTTATGTGACATTCACCGACAGTGGAAGAAAGTGGAGATGTAATATATGTGCATTGCTTAATGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTGGTGAATATTTCGCACATTTGGATGCCAGTGGCAGAAGAGTTGACTTGGATCAAAGGCCTGAACTTACCAAAGGTAGCGTGGAGTTTATTGCTCCAGCTGAGTACATGGTCCGGCCTCCGATGCCTCCCCTGTACTTTTTTCTCATTGATGTATCTTTGACTGCTGTGAGAAGTGGAATGCTTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTAGCACAAACCATCAAGAACAGTTTGGACAGCTTGCCTGGATTTCCAAGAACACAGATCGGGTTTATAACATATGACAGTACAGTACACTTTTATAACATGAAG..........................................................................................TCATCCTTGACTCAACCTCAAATGATGGTCATGTCAGATCTTGAAGATGTATTTGTGCCATTGCCAGATGATCTTCTTGTCAACTTGTCAGAATCAAGAACTGTGGTAGATGCATTTCTAGACAGCCTTCCTTCTATGTTTCAGGATAATGCGAATGTGGAATCAGCTTTTGGTCCAGCTCTT-AAACAGCCTTCATGGTTATG...................................................................................................................................................AACAAACTTGGCGGTAAATTGCTGATCTTTCAAAGCAGTCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E267745" ref_strand="+" ref_description="SGN-E267745 [cLEI-12-J5]">
      <seq>tgcagttcaagatttttgaggctcacaactagtggcataccaaattctcagtctttggcttcaaggtggcacttatctcttggagcagttgtttgtcctctcgccgaggcatcagatggggaagaagttcctgtggttaattttgccccaactggtatcatccgctgtagaaggtgtcgcacttatgtaaatccttatgtgacattcaccgacagtggaagaaagtggagatgtaatatatgtgcattgcttaatgaagttcctggtgaatatttcgcacatttggatgccagtggcagaagagttgacttggatcaaaggcctgaacttaccaaaggtagcgtggagtttattgctccagctgagtacatggtccggcctccgatgcctcccctgtacttttttctcattgatgtatctttgactgctgtgagaagtggaatgcttgaggttttagcacaaaccatcaagaacagtttggacagcttgcctggatttccaagaacacagatcgggtttataacatatgacagtacagtacactgttataacatgaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="116039" stop="118424"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116339" g_stop="116458" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="120" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116459" i_stop="116562" i_length="104">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.791" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="116563" g_stop="116701" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="121" r_stop="259" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="116702" i_stop="117421" i_length="720">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="117422" g_stop="117612" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="450" r_length="191" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="117613" i_stop="118016" i_length="404">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.836" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="118017" g_stop="118124" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="558" r_length="108" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E267745" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267745" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116339" e_stop="116458"/>
          <exon e_start="116563" e_stop="116701"/>
          <exon e_start="117422" e_stop="117612"/>
          <exon e_start="118017" e_stop="118124"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAGTTCAAGATTTTTGAGGCTCACAACTAGTGGCATACCAAATTCTCAGTCTTTGGCTTCAAGGTGGCACTTATCTCTTGGAGCAGTTGTTTGTCCTCTCGCCGAGGCATCAGATGGGGTATGTATTCATGACATAGTACTCTTTTCATATTCTGGATAGTTACAGTTTAAGGGTTTCATGTGAATCTCACTTGCTCTACGTGCAAAATCTACATCATGCAGGAAGAAGTTCCTGTGGTTAATTTTGCCCCAACTGGTATCATCCGCTGTAGAAGGTGTCGCACTTATGTAAATCCTTATGTGACATTCACCGACAGTGGAAGAAAGTGGAGATGTAATATATGTGCATTGCTTAATGAAGGTAAGTACTGTCACTACTGATATTGCTTCAGGTCTTGAGTTTTTAACAAGTATATTTTGGTTTTAGTATACTTTAAAAGTTTTAGTTAGGTGTAGCTAGAATAGTTGAATTCCTTCTTGAATATTCTGTTGCGTTTTTGCATTGATTAACTTCCTAATATGTGGGTAGATGGGTTAAGGCCGCGAGAGAGATGGAGGGAAGTGGATTAATGTGCATGAGGCTGGCACCGTAATATGTCGAATGCATGCATCCCGATTTTGGAAATAACCTTAACCTTGAAATAAGTAATGGTAGAAGGTCAGATGATTAATGAGTAAATGCCTAAATAAAATGACCCCACTTAGCTTTAATACTAAACTGTGCTATCTTATTAATGAACAAAAACTTCTATGTAGACCTTACTTTCTGCTCTTTGCATCTTTTAGCAGATTTTTTTCTACTCATTGCTCACATTCCATTCAAATTGCTGCTAAGAGAACTTTGATACTCCACCATGTCCTCTCTGATTGTGATGCTGGATTTAATTTGTCTACAATTGTTTGTTTTCATTGCCATATATGTACAAGTTAGCATTCCATGTCAGGGCCTCCCAGCTATGTTGTTGTGCTTTTTGTCACTTTAGAATCTGAAGATTCACATTTCTAATGTTGCATATTGAGGATGTAGTGTATTGTGTCCTTTTTTGAAATGCATGGGCTCATTTTTTCTCTCTATGTCTAGTTCCTGGTGAATATTTCGCACATTTGGATGCCAGTGGCAGAAGAGTTGACTTGGATCAAAGGCCTGAACTTACCAAAGGTAGCGTGGAGTTTATTGCTCCAGCTGAGTACATGGTCCGGCCTCCGATGCCTCCCCTGTACTTTTTTCTCATTGATGTATCTTTGACTGCTGTGAGAAGTGGAATGCTTGAGGTAAGAGATTTAGTTATTGAGCTTTGCAGTTTGTATCTAACTACAACAAACTACACATCAATTATGGCCACCGTCCTTTCTACATGCAAGTTAACCAACTTGGAGAGGGTTCTCTATTGGTCATTATTGTGTGGCTTATTGGTGCAAGTATTGCTGTTGCCATCTTATATTAGAATGCTTCTGAGAAATCATTCACATAGACGAGCCTGATGTTTGTATATATGAGCACGTGGGGCTCGTTTTCAAATTTTATCATTTAATTTGATATTCCATTAAGTATCAATTGCCTGTCTAGTTAAACTTCTATTTGTTGGCTACTGGAGCAATTTTTTGTAAAATAATCTGATAAATTGCAAGTTTATCTGGTATGCCCTTTGTTAATCCCTTTTATACATCTACGTCAGGTTTTAGCACAAACCATCAAGAACAGTTTGGACAGCTTGCCTGGATTTCCAAGAACACAGATCGGGTTTATAACATATGACAGTACAGTACACTTTTATAACATGAAG</genome_strand>
        <mrna_strand>TGCAGTTCAAGATTTTTGAGGCTCACAACTAGTGGCATACCAAATTCTCAGTCTTTGGCTTCAAGGTGGCACTTATCTCTTGGAGCAGTTGTTTGTCCTCTCGCCGAGGCATCAGATGGG........................................................................................................GAAGAAGTTCCTGTGGTTAATTTTGCCCCAACTGGTATCATCCGCTGTAGAAGGTGTCGCACTTATGTAAATCCTTATGTGACATTCACCGACAGTGGAAGAAAGTGGAGATGTAATATATGTGCATTGCTTAATGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTGGTGAATATTTCGCACATTTGGATGCCAGTGGCAGAAGAGTTGACTTGGATCAAAGGCCTGAACTTACCAAAGGTAGCGTGGAGTTTATTGCTCCAGCTGAGTACATGGTCCGGCCTCCGATGCCTCCCCTGTACTTTTTTCTCATTGATGTATCTTTGACTGCTGTGAGAAGTGGAATGCTTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTAGCACAAACCATCAAGAACAGTTTGGACAGCTTGCCTGGATTTCCAAGAACACAGATCGGGTTTATAACATATGACAGTACAGTACACTGTTATAACATGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E265302" ref_strand="+" ref_description="SGN-E265302 [cLEI-9-O24]">
      <seq>ggagatgtaatatatgtgcattgcttaatgaagttcctggtgaatatttcgcacatttggatgccagtggcagaagagttgacttggatcaaaggcctgaacttaccaaaggtagcgtggagtttattgctccagctgagtacatggtccggcctccgatgcctcccctgtacttttttctcattgatgtatctttgactgctgtgagaagtggaatgcttgaggttttagcacaaaccatcaagaacagtttggacagcttgcctggatttccaagaacacagatcgggtttataacatatgacagtacagtacacttttataacatgaagtcatccttgactcaacctcaaatgatggtcatgtcagatcttgaagatgtatttgtgccattgccagatgatcttcttgtcaacttgtcagaatcaagaactgtggtagatgcatttctagacagccttccttcaatgtttcaggataatgcgaatgtggaatcagcttttggtccagcttttaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="116369" stop="118701"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116669" g_stop="116701" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="33" r_length="33" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116702" i_stop="117421" i_length="720">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="117422" g_stop="117612" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="34" r_stop="224" r_length="191" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="117613" i_stop="118016" i_length="404">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.836" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="118017" g_stop="118124" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="332" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="118125" i_stop="118214" i_length="90">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.897" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="118215" g_stop="118401" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="519" r_length="187" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E265302" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E265302" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116669" e_stop="116701"/>
          <exon e_start="117422" e_stop="117612"/>
          <exon e_start="118017" e_stop="118124"/>
          <exon e_start="118215" e_stop="118401"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGATGTAATATATGTGCATTGCTTAATGAAGGTAAGTACTGTCACTACTGATATTGCTTCAGGTCTTGAGTTTTTAACAAGTATATTTTGGTTTTAGTATACTTTAAAAGTTTTAGTTAGGTGTAGCTAGAATAGTTGAATTCCTTCTTGAATATTCTGTTGCGTTTTTGCATTGATTAACTTCCTAATATGTGGGTAGATGGGTTAAGGCCGCGAGAGAGATGGAGGGAAGTGGATTAATGTGCATGAGGCTGGCACCGTAATATGTCGAATGCATGCATCCCGATTTTGGAAATAACCTTAACCTTGAAATAAGTAATGGTAGAAGGTCAGATGATTAATGAGTAAATGCCTAAATAAAATGACCCCACTTAGCTTTAATACTAAACTGTGCTATCTTATTAATGAACAAAAACTTCTATGTAGACCTTACTTTCTGCTCTTTGCATCTTTTAGCAGATTTTTTTCTACTCATTGCTCACATTCCATTCAAATTGCTGCTAAGAGAACTTTGATACTCCACCATGTCCTCTCTGATTGTGATGCTGGATTTAATTTGTCTACAATTGTTTGTTTTCATTGCCATATATGTACAAGTTAGCATTCCATGTCAGGGCCTCCCAGCTATGTTGTTGTGCTTTTTGTCACTTTAGAATCTGAAGATTCACATTTCTAATGTTGCATATTGAGGATGTAGTGTATTGTGTCCTTTTTTGAAATGCATGGGCTCATTTTTTCTCTCTATGTCTAGTTCCTGGTGAATATTTCGCACATTTGGATGCCAGTGGCAGAAGAGTTGACTTGGATCAAAGGCCTGAACTTACCAAAGGTAGCGTGGAGTTTATTGCTCCAGCTGAGTACATGGTCCGGCCTCCGATGCCTCCCCTGTACTTTTTTCTCATTGATGTATCTTTGACTGCTGTGAGAAGTGGAATGCTTGAGGTAAGAGATTTAGTTATTGAGCTTTGCAGTTTGTATCTAACTACAACAAACTACACATCAATTATGGCCACCGTCCTTTCTACATGCAAGTTAACCAACTTGGAGAGGGTTCTCTATTGGTCATTATTGTGTGGCTTATTGGTGCAAGTATTGCTGTTGCCATCTTATATTAGAATGCTTCTGAGAAATCATTCACATAGACGAGCCTGATGTTTGTATATATGAGCACGTGGGGCTCGTTTTCAAATTTTATCATTTAATTTGATATTCCATTAAGTATCAATTGCCTGTCTAGTTAAACTTCTATTTGTTGGCTACTGGAGCAATTTTTTGTAAAATAATCTGATAAATTGCAAGTTTATCTGGTATGCCCTTTGTTAATCCCTTTTATACATCTACGTCAGGTTTTAGCACAAACCATCAAGAACAGTTTGGACAGCTTGCCTGGATTTCCAAGAACACAGATCGGGTTTATAACATATGACAGTACAGTACACTTTTATAACATGAAGGCGAGTCAGCCGAATAATGATTAATCTTATTGCATAATATGAATATCCATTTACTGTTAAATAATTTAGGTTCTTTTTCTCTTGTACCAGTCATCCTTGACTCAACCTCAAATGATGGTCATGTCAGATCTTGAAGATGTATTTGTGCCATTGCCAGATGATCTTCTTGTCAACTTGTCAGAATCAAGAACTGTGGTAGATGCATTTCTAGACAGCCTTCCTTCAATGTTTCAGGATAATGCGAATGTGGAATCAGCTTTTGGTCCAGCTCTTAAAA</genome_strand>
        <mrna_strand>GGAGATGTAATATATGTGCATTGCTTAATGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTGGTGAATATTTCGCACATTTGGATGCCAGTGGCAGAAGAGTTGACTTGGATCAAAGGCCTGAACTTACCAAAGGTAGCGTGGAGTTTATTGCTCCAGCTGAGTACATGGTCCGGCCTCCGATGCCTCCCCTGTACTTTTTTCTCATTGATGTATCTTTGACTGCTGTGAGAAGTGGAATGCTTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTAGCACAAACCATCAAGAACAGTTTGGACAGCTTGCCTGGATTTCCAAGAACACAGATCGGGTTTATAACATATGACAGTACAGTACACTTTTATAACATGAAG..........................................................................................TCATCCTTGACTCAACCTCAAATGATGGTCATGTCAGATCTTGAAGATGTATTTGTGCCATTGCCAGATGATCTTCTTGTCAACTTGTCAGAATCAAGAACTGTGGTAGATGCATTTCTAGACAGCCTTCCTTCAATGTTTCAGGATAATGCGAATGTGGAATCAGCTTTTGGTCCAGCTTTTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E538332" ref_strand="+" ref_description="SGN-E538332 [TUS-57-H8]">
      <seq>tagcagtcaatgtatatgctttcagtgacaaatatactgacatagctactataggtacgctggcaaagtacacaggtggtcaggtgtactactatccaagttttcaagcgtccgttcacaaagatagattgcgtcacgagttaacccgagatcttacaagggagactgcttgggagtctgtcatgcgcataagatgtggaaaaggtgttcgttttacaacatatcatgggaacttcatgctgagatccactgatctgatagcacttcctgctgttgactgtgataaagcatatgcaatgcagttatcccttgaagaaacactactcacttcccagacagtatttttccaaattgctctactatacacatcatcttctggagaaaggcgcattagagtacacacagcagcagcaccggttgtttcagatttaggagaaatgtatcgcctagctgatactggtgctatcatttctctttttaccaggcttgccattgagaaaactctgacctctaaattagaggaggctcgaaattctattcaactcaggattgtgaaagctcttagagaatatcgaaatctccatgctgttcagcaccgtgtggctggaaggatgatttatccagaatctttaaagtacttgccattatatggattagctttatgcaaaacaactgcccttcgcggtggatatgctgatgctcagcttgacgaacgatgtgctgctggatataccatgatggctttgcccgttaaaagattgttgaagcttctatatcctaagttgatccgtatagatgaatatcttctaaaaaaccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="118444" stop="121388"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="118744" g_stop="118797" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="118798" i_stop="119869" i_length="1072">
            <donor d_prob="0.903" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="119870" g_stop="120019" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="204" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="120020" i_stop="120134" i_length="115">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="120135" g_stop="120291" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="361" r_length="157" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="120292" i_stop="120538" i_length="247">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.823" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="120539" g_stop="120666" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="489" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="120667" i_stop="120765" i_length="99">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.642" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="120766" g_stop="121088" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="811" r_length="322" r_score="0.997"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="121089" i_stop="121167" i_length="79">
            <donor d_prob="0.923" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="121168" g_stop="121174" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="812" r_stop="818" r_length="7" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E538332" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>819</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E538332" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="118744" e_stop="118797"/>
          <exon e_start="119870" e_stop="120019"/>
          <exon e_start="120135" e_stop="120291"/>
          <exon e_start="120539" e_stop="120666"/>
          <exon e_start="120766" e_stop="121088"/>
          <exon e_start="121168" e_stop="121174"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCAGTCAATGTATATGCTTTCAGTGACAAATATACTGACATAGCTACTATAGGTAATTGAACTCTAACGATAAAGGACCTCTACCCCACAGATTAAATTGTGTTTCATGTTTAAGCTGATGAATACTTCTTTTTTAAAAAAAAAAAATATTCCTTTTGATAAGTCAAAGGTTTCATTACTAAGCATCAAGTTTTTGTCAAAAGTTGTACCAATTGTTTTTGACTTAAACCAAGTTGTCTGCTGGCATCTAAACAAGTCTCCGATTGTCCATACAACATGGTATTCACTCTTCACACCAAATTAACAAGTGAGACATGATCGATCTTTTGATGCCTTTTATGTCATTGGAGCTCACTGGAGCATTCTTTCTTCTTTGCATTACATAAGCACCAAAAGTGATGTATTAGTGATGCTCCAGGCTGTCTTATCTCCCACTTTTGATCCTCTGTGATCTCTAGTCTAGCTCGTGGTTGCATCCTCCACTTCCATTGTGTAACACCCTTGATCTATTCTACAAGCGAGAATGCAAGGGCTCACGATTGTGTTGTTAACCTGCAATGCAACAATGGATACTTAGTATCTTCTACAGATTCTCTGCACATGCAACACTAACTCACTAATATCCTCCTCTTTATCAAGTTGTCAGTTGATGAATGCTTCAGTTTACACCAACATTTTCTTTCATATGCCCAAAATTTTCCCATTGAATTCTATGAGATCTTTTTATCCGTCGAACATAATCTTGTTTTATAAAAGGACCTTGTGCCGAAGGCAATCAGGGAAGGCTGATTGATTGACTTCTGTGAGGAATTTGGATGTTCTTTCACTTTGACGTTTGTACGAAGTATAAGCAAAAGCAGAATTAGTAGAAATAAATTACATACAGGGAACTGTGAAAAAATGTCATGCTTAAAATTTTCTTTTAGATGAAAGTGTGTTAAATTAAGTTATTTGGTATACTGAAACATTCCCTGTACTCTGTATTGCCACAGTCAAGGTAGGTCAATTTATTTGACTGAAAGTTGCTCATAATGGGAGTTCATCGTCTTGGTGACCACAGTTATTAATATTTAGGTATGTCCTCATGAGATATTGATGTATAACTTCCTTTAATTATATTGTAGGTACGCTGGCAAAGTACACAGGTGGTCAGGTGTACTACTATCCAAGTTTTCAAGCGTCCGTTCACAAAGATAGATTGCGTCACGAGTTAACCCGAGATCTTACAAGGGAGACTGCTTGGGAGTCTGTCATGCGCATAAGATGTGGAAAAGGTTATCTTGCTATATTACTCTAACCTCTAGAAGCTTAATTTCACTTCCATGTGCAATAAAGAGAGTTTGTGGAGTGTATGTTGGTATAGGTCACTAAGATGTTTGGTGCTTTCAGGTGTTCGTTTTACAACATATCATGGGAACTTCATGCTGAGATCCACTGATCTGATAGCACTTCCTGCTGTTGACTGTGATAAAGCATATGCAATGCAGTTATCCCTTGAAGAAACACTACTCACTTCCCAGACAGTATTTTTCCAAATTGCTCTACTGTATCCTTTAGCATGAAATGTTTTGTGCTTAATTCACTTCATATATTTTCTCGAGTACTCCTGCACCAGATACTTTTTAAATGGGAATCCAGGTGATGTCTATTCTAGGATGAAAATTCCCCTCCTAAATATTTCATAGAAGCATTAATTTCCTAGTTTTTAATTTTATTTTTTTTGATAATGAATGAACTTACCCATGATGAATGAGTAATAGGGTTTCCTGGAACACTTTCTTAACAATTAAAAGATACACATCATCTTCTGGAGAAAGGCGCATTAGAGTACACACAGCAGCAGCACCGGTTGTTTCAGATTTAGGAGAAATGTATCGCCTAGCTGATACTGGTGCTATCATTTCTCTTTTTACCAGGCTTGGTAAATTTAGCTATACTTTTCTTGTATTTGGTCCTGTGACTTTGAGATTTTTCCCTTTAGTACTTTTAAGTTTCTTACGCGCAAGTTCTTGTCTTTCAGCCATTGAGAAAACTCTGACCTCTAAATTAGAGGAGGCTCGAAATTCTATTCAACTCAGGATTGTGAAAGCTCTTAGAGAATATCGAAATCTCCATGCTGTTCAGCACCGTGTGGCTGGAAGGATGATTTATCCAGAATCTTTAAAGTACTTGCCATTATATGGATTAGCTTTATGCAAAACAACTGCCCTTCGCGGTGGATATGCTGATGCTCAGCTTGACGAACGATGTGCTGCTGGATATACCATGATGGCTTTGCCCGTTAAAAGATTGTTGAAGCTTCTATATCCTAAGTTGATCCGTATAGATGAATATCTTCTAAAAGTAAGCATCTGACAGCCCTTCCACATTGTTGCTGTATTTGCTTTAAAGGTTCTAAAACCTATGATTTTTCTATTTCTAGAAACCAT</genome_strand>
        <mrna_strand>TAGCAGTCAATGTATATGCTTTCAGTGACAAATATACTGACATAGCTACTATAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGCTGGCAAAGTACACAGGTGGTCAGGTGTACTACTATCCAAGTTTTCAAGCGTCCGTTCACAAAGATAGATTGCGTCACGAGTTAACCCGAGATCTTACAAGGGAGACTGCTTGGGAGTCTGTCATGCGCATAAGATGTGGAAAAG...................................................................................................................GTGTTCGTTTTACAACATATCATGGGAACTTCATGCTGAGATCCACTGATCTGATAGCACTTCCTGCTGTTGACTGTGATAAAGCATATGCAATGCAGTTATCCCTTGAAGAAACACTACTCACTTCCCAGACAGTATTTTTCCAAATTGCTCTACT.......................................................................................................................................................................................................................................................ATACACATCATCTTCTGGAGAAAGGCGCATTAGAGTACACACAGCAGCAGCACCGGTTGTTTCAGATTTAGGAGAAATGTATCGCCTAGCTGATACTGGTGCTATCATTTCTCTTTTTACCAGGCTTG...................................................................................................CCATTGAGAAAACTCTGACCTCTAAATTAGAGGAGGCTCGAAATTCTATTCAACTCAGGATTGTGAAAGCTCTTAGAGAATATCGAAATCTCCATGCTGTTCAGCACCGTGTGGCTGGAAGGATGATTTATCCAGAATCTTTAAAGTACTTGCCATTATATGGATTAGCTTTATGCAAAACAACTGCCCTTCGCGGTGGATATGCTGATGCTCAGCTTGACGAACGATGTGCTGCTGGATATACCATGATGGCTTTGCCCGTTAAAAGATTGTTGAAGCTTCTATATCCTAAGTTGATCCGTATAGATGAATATCTTCT-AAA...............................................................................AAACCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E538339" ref_strand="+" ref_description="SGN-E538339 [TUS-57-H12]">
      <seq>tagcagtcaatgtatatgcattcagtgacaaatatactgacatagctactataggtacgctggcaaagtacacaggtggtcaggtgtactactatccaagttttcaagcgtccgttcacaaagatagattgcgtcacgagttaacccgagatcttacaagggagactgcttgggagtctgtcatgcgcataagatgtggaaaaggtgttcgttttacaacatatcatgggaacttcatgctgagatccactgatctgatagcacttcctgctgttgactgtgataaagaatatgcaatgcagttatcccttgaagaaacactactcacttcccagacagtatttttccaaattgctctactatacacatcatcttctggagaaaggcgcattagagtacacacagcagcagcaccggttgtttcagatttaggagaaatgtatcgcctacctgatactggtgctatcatttctctttttaccaggcttgccattgagaaaactctgacctctaaattagaggaggctcgaaattctattcaactcaggattgtgaaagctcttagagaatatcgaaatctccatgctgttcagcaccgtgtggctggaaggatgatttatccagaatctttaaagtacttgccattatatggattagctttatgcaaaaaactgccctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="118444" stop="121256"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="118744" g_stop="118797" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="118798" i_stop="119869" i_length="1072">
            <donor d_prob="0.903" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="119870" g_stop="120019" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="204" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="120020" i_stop="120134" i_length="115">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="120135" g_stop="120291" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="361" r_length="157" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="120292" i_stop="120538" i_length="247">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.823" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="120539" g_stop="120666" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="489" r_length="128" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="120667" i_stop="120765" i_length="99">
            <donor d_prob="0.956" d_score="0.98"/>
            <acceptor a_prob="0.642" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="120766" g_stop="120956" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="679" r_length="190" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E538339" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E538339" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="118744" e_stop="118797"/>
          <exon e_start="119870" e_stop="120019"/>
          <exon e_start="120135" e_stop="120291"/>
          <exon e_start="120539" e_stop="120666"/>
          <exon e_start="120766" e_stop="120956"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCAGTCAATGTATATGCTTTCAGTGACAAATATACTGACATAGCTACTATAGGTAATTGAACTCTAACGATAAAGGACCTCTACCCCACAGATTAAATTGTGTTTCATGTTTAAGCTGATGAATACTTCTTTTTTAAAAAAAAAAAATATTCCTTTTGATAAGTCAAAGGTTTCATTACTAAGCATCAAGTTTTTGTCAAAAGTTGTACCAATTGTTTTTGACTTAAACCAAGTTGTCTGCTGGCATCTAAACAAGTCTCCGATTGTCCATACAACATGGTATTCACTCTTCACACCAAATTAACAAGTGAGACATGATCGATCTTTTGATGCCTTTTATGTCATTGGAGCTCACTGGAGCATTCTTTCTTCTTTGCATTACATAAGCACCAAAAGTGATGTATTAGTGATGCTCCAGGCTGTCTTATCTCCCACTTTTGATCCTCTGTGATCTCTAGTCTAGCTCGTGGTTGCATCCTCCACTTCCATTGTGTAACACCCTTGATCTATTCTACAAGCGAGAATGCAAGGGCTCACGATTGTGTTGTTAACCTGCAATGCAACAATGGATACTTAGTATCTTCTACAGATTCTCTGCACATGCAACACTAACTCACTAATATCCTCCTCTTTATCAAGTTGTCAGTTGATGAATGCTTCAGTTTACACCAACATTTTCTTTCATATGCCCAAAATTTTCCCATTGAATTCTATGAGATCTTTTTATCCGTCGAACATAATCTTGTTTTATAAAAGGACCTTGTGCCGAAGGCAATCAGGGAAGGCTGATTGATTGACTTCTGTGAGGAATTTGGATGTTCTTTCACTTTGACGTTTGTACGAAGTATAAGCAAAAGCAGAATTAGTAGAAATAAATTACATACAGGGAACTGTGAAAAAATGTCATGCTTAAAATTTTCTTTTAGATGAAAGTGTGTTAAATTAAGTTATTTGGTATACTGAAACATTCCCTGTACTCTGTATTGCCACAGTCAAGGTAGGTCAATTTATTTGACTGAAAGTTGCTCATAATGGGAGTTCATCGTCTTGGTGACCACAGTTATTAATATTTAGGTATGTCCTCATGAGATATTGATGTATAACTTCCTTTAATTATATTGTAGGTACGCTGGCAAAGTACACAGGTGGTCAGGTGTACTACTATCCAAGTTTTCAAGCGTCCGTTCACAAAGATAGATTGCGTCACGAGTTAACCCGAGATCTTACAAGGGAGACTGCTTGGGAGTCTGTCATGCGCATAAGATGTGGAAAAGGTTATCTTGCTATATTACTCTAACCTCTAGAAGCTTAATTTCACTTCCATGTGCAATAAAGAGAGTTTGTGGAGTGTATGTTGGTATAGGTCACTAAGATGTTTGGTGCTTTCAGGTGTTCGTTTTACAACATATCATGGGAACTTCATGCTGAGATCCACTGATCTGATAGCACTTCCTGCTGTTGACTGTGATAAAGCATATGCAATGCAGTTATCCCTTGAAGAAACACTACTCACTTCCCAGACAGTATTTTTCCAAATTGCTCTACTGTATCCTTTAGCATGAAATGTTTTGTGCTTAATTCACTTCATATATTTTCTCGAGTACTCCTGCACCAGATACTTTTTAAATGGGAATCCAGGTGATGTCTATTCTAGGATGAAAATTCCCCTCCTAAATATTTCATAGAAGCATTAATTTCCTAGTTTTTAATTTTATTTTTTTTGATAATGAATGAACTTACCCATGATGAATGAGTAATAGGGTTTCCTGGAACACTTTCTTAACAATTAAAAGATACACATCATCTTCTGGAGAAAGGCGCATTAGAGTACACACAGCAGCAGCACCGGTTGTTTCAGATTTAGGAGAAATGTATCGCCTAGCTGATACTGGTGCTATCATTTCTCTTTTTACCAGGCTTGGTAAATTTAGCTATACTTTTCTTGTATTTGGTCCTGTGACTTTGAGATTTTTCCCTTTAGTACTTTTAAGTTTCTTACGCGCAAGTTCTTGTCTTTCAGCCATTGAGAAAACTCTGACCTCTAAATTAGAGGAGGCTCGAAATTCTATTCAACTCAGGATTGTGAAAGCTCTTAGAGAATATCGAAATCTCCATGCTGTTCAGCACCGTGTGGCTGGAAGGATGATTTATCCAGAATCTTTAAAGTACTTGCCATTATATGGATTAGCTTTATGCAAAACAACTGCCCTT</genome_strand>
        <mrna_strand>TAGCAGTCAATGTATATGCATTCAGTGACAAATATACTGACATAGCTACTATAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGCTGGCAAAGTACACAGGTGGTCAGGTGTACTACTATCCAAGTTTTCAAGCGTCCGTTCACAAAGATAGATTGCGTCACGAGTTAACCCGAGATCTTACAAGGGAGACTGCTTGGGAGTCTGTCATGCGCATAAGATGTGGAAAAG...................................................................................................................GTGTTCGTTTTACAACATATCATGGGAACTTCATGCTGAGATCCACTGATCTGATAGCACTTCCTGCTGTTGACTGTGATAAAGAATATGCAATGCAGTTATCCCTTGAAGAAACACTACTCACTTCCCAGACAGTATTTTTCCAAATTGCTCTACT.......................................................................................................................................................................................................................................................ATACACATCATCTTCTGGAGAAAGGCGCATTAGAGTACACACAGCAGCAGCACCGGTTGTTTCAGATTTAGGAGAAATGTATCGCCTACCTGATACTGGTGCTATCATTTCTCTTTTTACCAGGCTTG...................................................................................................CCATTGAGAAAACTCTGACCTCTAAATTAGAGGAGGCTCGAAATTCTATTCAACTCAGGATTGTGAAAGCTCTTAGAGAATATCGAAATCTCCATGCTGTTCAGCACCGTGTGGCTGGAAGGATGATTTATCCAGAATCTTTAAAGTACTTGCCATTATATGGATTAGCTTTATGCAAAA-AACTGCCCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E269616" ref_strand="+" ref_description="SGN-E269616 [cLEM-2-L7]">
      <seq>cagccaatgtatatgctttcagtgacaaatatactgacatagctactataggtacgctggcaaagtacacaggtggtcaggtgtactactatccaagttttcaagcgtccgttcacaaagatagattgcgtcacgagttaacccgagatcttacaagggagactgcttgggagtctgtcatgcgcataagatgtggaaaaggtgttcgttttacaacatatcatgggaacttcatgctgagatccactgatctgatagcacttcctgctgttgactgtgataaagcatatgcaatgcagttatccgttgaagaaacactactcacttcccagacagtatttttccaaattgctctactatacacatcatcttctggagaaaggcgcattagagtacacacagcagcagcaccggttgtttcagatttaggagaaatgtatcgcctagctgatactggtgctatcatttctctttttaccaggcttgccattgagaaaactctgacctctaaattagaagaggctcgaaattctattcaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="118447" stop="121119"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="118747" g_stop="118797" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="118798" i_stop="119869" i_length="1072">
            <donor d_prob="0.903" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="119870" g_stop="120019" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="201" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="120020" i_stop="120134" i_length="115">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="120135" g_stop="120291" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="358" r_length="157" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="120292" i_stop="120538" i_length="247">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.823" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="120539" g_stop="120666" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="486" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="120667" i_stop="120765" i_length="99">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.642" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="120766" g_stop="120819" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="487" r_stop="540" r_length="54" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E269616" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E269616" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="118747" e_stop="118797"/>
          <exon e_start="119870" e_stop="120019"/>
          <exon e_start="120135" e_stop="120291"/>
          <exon e_start="120539" e_stop="120666"/>
          <exon e_start="120766" e_stop="120819"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTCAATGTATATGCTTTCAGTGACAAATATACTGACATAGCTACTATAGGTAATTGAACTCTAACGATAAAGGACCTCTACCCCACAGATTAAATTGTGTTTCATGTTTAAGCTGATGAATACTTCTTTTTTAAAAAAAAAAAATATTCCTTTTGATAAGTCAAAGGTTTCATTACTAAGCATCAAGTTTTTGTCAAAAGTTGTACCAATTGTTTTTGACTTAAACCAAGTTGTCTGCTGGCATCTAAACAAGTCTCCGATTGTCCATACAACATGGTATTCACTCTTCACACCAAATTAACAAGTGAGACATGATCGATCTTTTGATGCCTTTTATGTCATTGGAGCTCACTGGAGCATTCTTTCTTCTTTGCATTACATAAGCACCAAAAGTGATGTATTAGTGATGCTCCAGGCTGTCTTATCTCCCACTTTTGATCCTCTGTGATCTCTAGTCTAGCTCGTGGTTGCATCCTCCACTTCCATTGTGTAACACCCTTGATCTATTCTACAAGCGAGAATGCAAGGGCTCACGATTGTGTTGTTAACCTGCAATGCAACAATGGATACTTAGTATCTTCTACAGATTCTCTGCACATGCAACACTAACTCACTAATATCCTCCTCTTTATCAAGTTGTCAGTTGATGAATGCTTCAGTTTACACCAACATTTTCTTTCATATGCCCAAAATTTTCCCATTGAATTCTATGAGATCTTTTTATCCGTCGAACATAATCTTGTTTTATAAAAGGACCTTGTGCCGAAGGCAATCAGGGAAGGCTGATTGATTGACTTCTGTGAGGAATTTGGATGTTCTTTCACTTTGACGTTTGTACGAAGTATAAGCAAAAGCAGAATTAGTAGAAATAAATTACATACAGGGAACTGTGAAAAAATGTCATGCTTAAAATTTTCTTTTAGATGAAAGTGTGTTAAATTAAGTTATTTGGTATACTGAAACATTCCCTGTACTCTGTATTGCCACAGTCAAGGTAGGTCAATTTATTTGACTGAAAGTTGCTCATAATGGGAGTTCATCGTCTTGGTGACCACAGTTATTAATATTTAGGTATGTCCTCATGAGATATTGATGTATAACTTCCTTTAATTATATTGTAGGTACGCTGGCAAAGTACACAGGTGGTCAGGTGTACTACTATCCAAGTTTTCAAGCGTCCGTTCACAAAGATAGATTGCGTCACGAGTTAACCCGAGATCTTACAAGGGAGACTGCTTGGGAGTCTGTCATGCGCATAAGATGTGGAAAAGGTTATCTTGCTATATTACTCTAACCTCTAGAAGCTTAATTTCACTTCCATGTGCAATAAAGAGAGTTTGTGGAGTGTATGTTGGTATAGGTCACTAAGATGTTTGGTGCTTTCAGGTGTTCGTTTTACAACATATCATGGGAACTTCATGCTGAGATCCACTGATCTGATAGCACTTCCTGCTGTTGACTGTGATAAAGCATATGCAATGCAGTTATCCCTTGAAGAAACACTACTCACTTCCCAGACAGTATTTTTCCAAATTGCTCTACTGTATCCTTTAGCATGAAATGTTTTGTGCTTAATTCACTTCATATATTTTCTCGAGTACTCCTGCACCAGATACTTTTTAAATGGGAATCCAGGTGATGTCTATTCTAGGATGAAAATTCCCCTCCTAAATATTTCATAGAAGCATTAATTTCCTAGTTTTTAATTTTATTTTTTTTGATAATGAATGAACTTACCCATGATGAATGAGTAATAGGGTTTCCTGGAACACTTTCTTAACAATTAAAAGATACACATCATCTTCTGGAGAAAGGCGCATTAGAGTACACACAGCAGCAGCACCGGTTGTTTCAGATTTAGGAGAAATGTATCGCCTAGCTGATACTGGTGCTATCATTTCTCTTTTTACCAGGCTTGGTAAATTTAGCTATACTTTTCTTGTATTTGGTCCTGTGACTTTGAGATTTTTCCCTTTAGTACTTTTAAGTTTCTTACGCGCAAGTTCTTGTCTTTCAGCCATTGAGAAAACTCTGACCTCTAAATTAGAGGAGGCTCGAAATTCTATTCAAC</genome_strand>
        <mrna_strand>CAGCCAATGTATATGCTTTCAGTGACAAATATACTGACATAGCTACTATAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGCTGGCAAAGTACACAGGTGGTCAGGTGTACTACTATCCAAGTTTTCAAGCGTCCGTTCACAAAGATAGATTGCGTCACGAGTTAACCCGAGATCTTACAAGGGAGACTGCTTGGGAGTCTGTCATGCGCATAAGATGTGGAAAAG...................................................................................................................GTGTTCGTTTTACAACATATCATGGGAACTTCATGCTGAGATCCACTGATCTGATAGCACTTCCTGCTGTTGACTGTGATAAAGCATATGCAATGCAGTTATCCGTTGAAGAAACACTACTCACTTCCCAGACAGTATTTTTCCAAATTGCTCTACT.......................................................................................................................................................................................................................................................ATACACATCATCTTCTGGAGAAAGGCGCATTAGAGTACACACAGCAGCAGCACCGGTTGTTTCAGATTTAGGAGAAATGTATCGCCTAGCTGATACTGGTGCTATCATTTCTCTTTTTACCAGGCTTG...................................................................................................CCATTGAGAAAACTCTGACCTCTAAATTAGAAGAGGCTCGAAATTCTATTCAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E275173" ref_strand="+" ref_description="SGN-E275173 [cLEN-9-H4]">
      <seq>attgctctactatacacatcatcttctggagaaaggcgcattagagtacacacagcagcagcaccggttgtttcagatttaggagaaatgtatcgcctagctgatactggtgctatcatttctctttttaccaggcttgccattgagaaaactctgacctctaaattagaggaggctcgaaattctattcaactcaggattgtgaaagctcttagagaatatcgaaatctccatgctgttcagcaccgtgtggctggaaggatgatttatccagaatctttaaagtacttgccattatatggattagctttatgcaaaacaactgcccttcgcggtggatatgctgatgctcagcttgacgaacgatgtgctgctggatataccatgatggctttgcccgttaaaagattgttgaagcttctatatcctaagttgatccgtatagatgaatatcttctaaaaaaaccatcttcgcgagaggagtctaaagacatcttgaaaggggttccacttacaacagagagcttagatccccagggtctctatctctttgatgatggtttccggtttgtcatctggttcggtagaatgctttctcctaatatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="120239" stop="121612"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120281" g_stop="120291" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="11" r_length="11" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120292" i_stop="120538" i_length="247">
            <donor d_prob="0.990" d_score="0.00"/>
            <acceptor a_prob="0.823" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120539" g_stop="120666" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="139" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="120667" i_stop="120765" i_length="99">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.642" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="120766" g_stop="121088" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="462" r_length="323" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="121089" i_stop="121167" i_length="79">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="121168" g_stop="121312" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="463" r_stop="607" r_length="145" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E275173" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E275173" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120281" e_stop="120291"/>
          <exon e_start="120539" e_stop="120666"/>
          <exon e_start="120766" e_stop="121088"/>
          <exon e_start="121168" e_stop="121312"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGCTCTACTGTATCCTTTAGCATGAAATGTTTTGTGCTTAATTCACTTCATATATTTTCTCGAGTACTCCTGCACCAGATACTTTTTAAATGGGAATCCAGGTGATGTCTATTCTAGGATGAAAATTCCCCTCCTAAATATTTCATAGAAGCATTAATTTCCTAGTTTTTAATTTTATTTTTTTTGATAATGAATGAACTTACCCATGATGAATGAGTAATAGGGTTTCCTGGAACACTTTCTTAACAATTAAAAGATACACATCATCTTCTGGAGAAAGGCGCATTAGAGTACACACAGCAGCAGCACCGGTTGTTTCAGATTTAGGAGAAATGTATCGCCTAGCTGATACTGGTGCTATCATTTCTCTTTTTACCAGGCTTGGTAAATTTAGCTATACTTTTCTTGTATTTGGTCCTGTGACTTTGAGATTTTTCCCTTTAGTACTTTTAAGTTTCTTACGCGCAAGTTCTTGTCTTTCAGCCATTGAGAAAACTCTGACCTCTAAATTAGAGGAGGCTCGAAATTCTATTCAACTCAGGATTGTGAAAGCTCTTAGAGAATATCGAAATCTCCATGCTGTTCAGCACCGTGTGGCTGGAAGGATGATTTATCCAGAATCTTTAAAGTACTTGCCATTATATGGATTAGCTTTATGCAAAACAACTGCCCTTCGCGGTGGATATGCTGATGCTCAGCTTGACGAACGATGTGCTGCTGGATATACCATGATGGCTTTGCCCGTTAAAAGATTGTTGAAGCTTCTATATCCTAAGTTGATCCGTATAGATGAATATCTTCTAAAAGTAAGCATCTGACAGCCCTTCCACATTGTTGCTGTATTTGCTTTAAAGGTTCTAAAACCTATGATTTTTCTATTTCTAGAAACCATCTTCGCGAGAGGAGTCTAAAGACATCTTGAAAGGGGTTCCACTTACAACAGAGAGCTTAGATCCCCAGGGTCTCTATCTCTTTGATGATGGTTTCCGGTTTGTCATCTGGTTCGGTAGAATGCTTTCTCCTAATATGA</genome_strand>
        <mrna_strand>ATTGCTCTACT.......................................................................................................................................................................................................................................................ATACACATCATCTTCTGGAGAAAGGCGCATTAGAGTACACACAGCAGCAGCACCGGTTGTTTCAGATTTAGGAGAAATGTATCGCCTAGCTGATACTGGTGCTATCATTTCTCTTTTTACCAGGCTTG...................................................................................................CCATTGAGAAAACTCTGACCTCTAAATTAGAGGAGGCTCGAAATTCTATTCAACTCAGGATTGTGAAAGCTCTTAGAGAATATCGAAATCTCCATGCTGTTCAGCACCGTGTGGCTGGAAGGATGATTTATCCAGAATCTTTAAAGTACTTGCCATTATATGGATTAGCTTTATGCAAAACAACTGCCCTTCGCGGTGGATATGCTGATGCTCAGCTTGACGAACGATGTGCTGCTGGATATACCATGATGGCTTTGCCCGTTAAAAGATTGTTGAAGCTTCTATATCCTAAGTTGATCCGTATAGATGAATATCTTCTAAAA...............................................................................AAACCATCTTCGCGAGAGGAGTCTAAAGACATCTTGAAAGGGGTTCCACTTACAACAGAGAGCTTAGATCCCCAGGGTCTCTATCTCTTTGATGATGGTTTCCGGTTTGTCATCTGGTTCGGTAGAATGCTTTCTCCTAATATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E319939" ref_strand="+" ref_description="SGN-E319939 [cTOB-31-A13]">
      <seq>tgtttcagatttaagagaaatgtatcgcctagctgatactggtgctatcatttctctttttaccaggcttgccattgagaaaactctgacctctaaattagaggaggctcgaaattctattcaactcatgattgtgaaagctcttagagaatatcgaaatctccatgctgttcagcaccgtgtggctggaaggatgatttatccagaatctttaaagtacttgccattatatggattagctttatgcaaaacaactgcccttcgcggtggatatgctgatgctcagcttgacgaacgatgtgctgctggatataccatgatggctttgcccgttaaaagattgttgaagcttctatatcctaaggtgatccgtatagatgaatatcttctaaaaaaaccatcttcgcgagaggagtctaaagacatcttgaaaggggttccacttacaacagagagcttagatccccagggtctctatctctttgatgatggtttccggattgtcatctggttcgcgagaatgctttctcctaatatgatccagagtttgctcggagaaaactttgctgctgacttctctaaggtttcacttcgagagctagataatgatatgtcaagagaactgatgggtttgcttataagacagatggagagtgacagatcctattatcagttatgccatcttgtgaagcaatgtgacagcctagagaaggcttcttcttgcttgcagatctgattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="120296" stop="126068"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120596" g_stop="120666" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120667" i_stop="120765" i_length="99">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.642" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120766" g_stop="121088" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="394" r_length="323" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121089" i_stop="121167" i_length="79">
            <donor d_prob="0.923" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121168" g_stop="121356" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="583" r_length="189" r_score="0.984"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="121357" i_stop="125611" i_length="4255">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="125612" g_stop="125768" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="584" r_stop="739" r_length="156" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E319939" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>740</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E319939" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120596" e_stop="120666"/>
          <exon e_start="120766" e_stop="121088"/>
          <exon e_start="121168" e_stop="121356"/>
          <exon e_start="125612" e_stop="125768"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTTCAGATTTAGGAGAAATGTATCGCCTAGCTGATACTGGTGCTATCATTTCTCTTTTTACCAGGCTTGGTAAATTTAGCTATACTTTTCTTGTATTTGGTCCTGTGACTTTGAGATTTTTCCCTTTAGTACTTTTAAGTTTCTTACGCGCAAGTTCTTGTCTTTCAGCCATTGAGAAAACTCTGACCTCTAAATTAGAGGAGGCTCGAAATTCTATTCAACTCAGGATTGTGAAAGCTCTTAGAGAATATCGAAATCTCCATGCTGTTCAGCACCGTGTGGCTGGAAGGATGATTTATCCAGAATCTTTAAAGTACTTGCCATTATATGGATTAGCTTTATGCAAAACAACTGCCCTTCGCGGTGGATATGCTGATGCTCAGCTTGACGAACGATGTGCTGCTGGATATACCATGATGGCTTTGCCCGTTAAAAGATTGTTGAAGCTTCTATATCCTAAGTTGATCCGTATAGATGAATATCTTCTAAAAGTAAGCATCTGACAGCCCTTCCACATTGTTGCTGTATTTGCTTTAAAGGTTCTAAAACCTATGATTTTTCTATTTCTAGAAACCATCTTCGCGAGAGGAGTCTAAAGACATCTTGAAAGGGGTTCCACTTACAACAGAGAGCTTAGATCCCCAGGGTCTCTATCTCTTTGATGATGGTTTCCGGTTTGTCATCTGGTTCGGTAGAATGCTTTCTCCTAATATGATCCAGAGTTTGCTCGGAGAAAACTTTGCTGCTGACTTCTCTAAGGTAAGATTTATAGACTGCTGTGTCATCATCACACCATATTAGGAAGGTTCCGTTTGGTACTGAATGGACCAAACGTAAGCCGTATGAAATTTGAATATGCACTTTAAATGCCAACTACTTAGTTACGTAGTTTGGTTTGGATTAAATGGTAAAATCTGATTAGACTTCCGCCAATGAAATGTAGGAAGCCAAAAACAAAGTTCTCATTTTATTTTTCAAAGTGGTTCCATGGATCGTATGTGGAATTGTCTCCAGTATAGATGTTGCTGATTAAAAGGATCTAAATCTCTACTCAGCTTCACCTATAGCATCCTTTTTCTTTCTGGGCAAGCCTCATTTTTCATTTTATGCAGGACCATTAGTTATCTGTTTCTTTTTGTTATAGGTTAGTAACTTTCTGGTCTACTGGGTTATAGATTAGTATCTCCAATCCGTTTTACTTAACTTTGTCGTTTGTCTTCCATAGGTTGTACAGTTGCCATCTTCTGAAATTTGTTCTCTTTATTCTACTTCTGCCCCTCTGGGTTCACACTGATTTACTGACATTTTCCTTATTACTGCATCATCCGAATCTGTGGAATCTATAACATTTCATTAATTTCTTATCTCCTTGTTCTAGCCTGCATGTAGACAGAATTAGTAAAACACAGTTGCTTCTGGTTTAAGCATCTATATTTTTGCTTTTCATCGGATGATGAAGAGCTCTTAAGTTCTCTGCTCTTGTATTTAGCTCTAAATGTTGTAATCTTAACTTTTTTCCACTTTGATGACTATTGTGAGGTTAATTCTGTGTGCCTTCTGTGAGACATATAGGAGAAAATTATTATTGAGTTGTTGTTGCGTCTACATTATTACATTGAGACCCTATTAATAGAACCTAGAATACAATTCTTTACCAAGTAGGTTACTATTTAGTATTCTTATTACTATTCTAATAGGATTGTATAAACCTATCCTATTTTAACACTCCCCCGCAAGCTAGTACATACAATTCATGTACCCAGCTTGTTACAAATGTAATTAACACAAGGACTGATGAGGGGCGTGGTGAGATACCTGCTAGTTGATTCGTCGACTTTACAAAATTGAAGTCAATCTCAATGTACTTGTCTACTCGTTAAATACTGGATTTGATGCATAATGCCAGTATTCCAGTGTTGAACTTCCCAAACCAAACCTGCAAAGATTGCTTCAAACCATAGACTGACACATAATCGACATACAAGGCTACTAAACTCCCCCTGAGCAACAAAGTGCTCAAAACCTAGTGTAAAGTATATGGATCATTTGGAATCAATAGATGAGTCGATATTAAACAAGTCACCACAGAACTGGTTGGAATATGCTCATATGCCGGAGTATTAGATTTTATGGCTAAAGTGGTGACAATCTAAGATATAAAATTATATAGGTAGGGCCGGAATGATATCACGACCCATCTAGAAAATAGAAATTATATAGGATAGTTCAAATTGATGGAACGACCCCATTGAAAAAGTGAACTAATATGGGTAGGTTCAGAATGATGGCACGACAGTGCCGAAAAAGAAAAATTATATGGGTAGGGTAATGATTGCACAACCCTACACAAATCAGATTTGAGGAGTCACCGAAAAGACGAATGGAACTATGCAAATCAAATCTAAGGATTCACTAAAAAGACACGTGATGCTATGCAATTCAGATATTAGAAAATAGTTCAGAAAAATTCACAGTACCACTCAAATCAAATATGAAAAACAGTTCGAAGAGATGCACGGTGCTATGCAAATCAGATTTGCAAAAAAGGTAGTCACCAGAAGAATGACATGGTGCTACACAAATTGTATATGAAAAAGTAGTTGCTGGAATGATGGCACAGTGCTACACAAACCAGATATGAAAAATTAGTCACCGAAAAGATTGCTCGGTGCTGAACTAATTAAATATGAAAAAGTAGTCACTGGAATGATGGCATGGTGCTACACAAGTTAAATATGAAAAAGTAGTCACTGAAATGATGACACGGTGCTACACGAATTAGATATAAGAAAGTAGTCACCTTAATGATGTCACGGTGCTACAAAAATTTGATATGAGAAAATAGTCACTAGAAAGATACATGGTGCCCAACTTTTGCTAACATAATTATTGGCCGGACGGGCAGCATATATGAGTAATAGCCGCCCGCCGGCAGCGGAAGCTCTTTGAGTTTTTATCAATATCGTAAAGGCTCTGATACTATGTGAGAAATATAGGGAAAAAAATATTATTGAATTGTTGTTGTGTCTACATTATTACATTGAGACCCTATTTATAGACCCTATAATACAATTCTTTACCAAGTAGGATACTATTTAGTATTCCTATTCCTATTCTAATAGGATTGTATAACCTATTCCTATTCTAATAGGATTGTATAAACCTATTCCTATTTCAATAGGATTGTATTAATCTATTCCTATTCTAACATTTTTTTTCTAGGTTAACAGGGTCATGCTTAAGATCTAGTCTTTTTGCATTTTTGGGATTCCCTTTTCATTGTTTTCCTAGATATGGATGAGTTGTACTTCAGAAGTACTTCCAGTTGGTTTCATGTTCTGGTTTGTAGGTAGCCTCAGAACTGGATTTCTTTCCCTTTGTGCAAGTTTATACTGAAGGCCCAAAGGTTCAAAACTTCCCATATGATTTCTCTTCCCTGAAGGTATAAAAGAAGTTTCCTGCATATTTGGTTTTCTGAGCATACAACATGCAGTGTTGTGAAAGGCACACTTAAGCCCTAAAGTGAGGGACTAAACACATTGAGCACTTCACCTTGCCTTATAGGCACTTCAGTTTCATCATCAAGGCTCTAAAAGCATACTTTTCCCTGCCAAGGAGTGCAATCCTAAAGATGTGATACTGTACAATTGATATTTCACTTTATTATAATTTTTTTGCGATTTCTTTGTCCATATATTTATTACTCATGCTAGTGATTATTAATCTTGGACTAGTTTTTCTTCATTTGCACCTTTTCTCATTAAAACCCGTGTTGTATTTGCACTTTGCGCTTAAAGCCCCAAAGGACATTAGTCTTTTTGCACTTTCACTTTTGACAACACTGACTGTATGTCAGCAGTACTAATTAGCATCTAACTAGGTTTGCAATGAAAGTATAGCTACTTTGATAACATCCATCGTGTCTGATGAAGGCACATACTCCTTCTGTATCTCAAGTGCTTAGATCTGCTACTTTCCTGAAATAATGAGATTCAAATAGTTGGAATGGAGATATATGGTAAAAGAGAAAGCAAGTGCACTCGATATGTGAGATCATAAGATCTACACCTCACTGACCGAAATTTAGTATGTTACTCTGACAAAATATCAGATGTCAAGATTTAAGGAAGTACTTGGAGGATGGGCAATTTAGCCCTGATAATGATTTTGCATTTTGAAGAAATGACTTCTGTTGCCTTGCAAATTTGAACTTAGTGAGTCAAGAAGGATATTTTTTTTCCTGAATTTTTAAAGATTCTTGTTGAAAAGAGGATGACTATAGGTCTTAAATCCTTGTTTAATTCACTTTTTGCTTACATGTGATATAACGTTCACTAAGAATTTGCAATGTATTCGCCTAGAGGACCTTTCTTTGCTTATGGAAACCTTAAAACATGGGTGTATGGTCCTATGACTATCTCCCAAAAGCTTTAGTGGGCAGAGTTAGCCGGAACCTGTGCTAGTGGGAGATAAGATGTCTGGTGGAATTAATAGAGGTGTGTGCAAGCGGGCCCAGACATGCATCATTAAAAATAGGGTATATGTGCCTCCTTTCTTCTGAATCTAGGTTCCCATTTTCTTTGCACACAAATATAAAGTCGTGTGTTGAAGTATTATTTGAACAGCTCATCACTGAACATCGGTGATATCTTGGCTATCCATAAAAAAGGATTTGTTCTATGGTGCAGCAATACTCTTTTGAAGGGATGTGTTTCTTGCTTATGCCCCCCACCTCATCCCCTGCGTAGAAAAAAAAACAGAAGGAATAAGACATATTTGAGAGTGCAGGGGATTACTTTTCTTGTTAGGACAGAGGAAAACTGAGGCGCAACCCGAGTTGAGACACAACTTATGACAGTTATTTGGAATGGAGGAACCAAGTTTGGCACTCAGCTGGTTTCTTCGCTGATTCAACCCTATGTCCTTCACTGTGTTGATGTTTTGAGACAGCTCCTGCAAATTTTCTGCTTGTCTTTAACTCTCTGATGTGATTTTTTTTTAAATTGTGAATCAGGTTTCACTTCAAGAGCTAGATAATGAAATGTCAAGAGAACTGATGGGTTTGCTTAAAAGACAGAGGGAGAGTGACAGATCATATTATCAGTTATGCCATCTTGTGAGGCAAGGTGAACAGCCTAGAGAAGGCTTCTTCTTGCTTGCAAATCTGATTG</genome_strand>
        <mrna_strand>TGTTTCAGATTTAAGAGAAATGTATCGCCTAGCTGATACTGGTGCTATCATTTCTCTTTTTACCAGGCTTG...................................................................................................CCATTGAGAAAACTCTGACCTCTAAATTAGAGGAGGCTCGAAATTCTATTCAACTCATGATTGTGAAAGCTCTTAGAGAATATCGAAATCTCCATGCTGTTCAGCACCGTGTGGCTGGAAGGATGATTTATCCAGAATCTTTAAAGTACTTGCCATTATATGGATTAGCTTTATGCAAAACAACTGCCCTTCGCGGTGGATATGCTGATGCTCAGCTTGACGAACGATGTGCTGCTGGATATACCATGATGGCTTTGCCCGTTAAAAGATTGTTGAAGCTTCTATATCCTAAGGTGATCCGTATAGATGAATATCTTCTAAAA...............................................................................AAACCATCTTCGCGAGAGGAGTCTAAAGACATCTTGAAAGGGGTTCCACTTACAACAGAGAGCTTAGATCCCCAGGGTCTCTATCTCTTTGATGATGGTTTCCGGATTGTCATCTGGTTCGCGAGAATGCTTTCTCCTAATATGATCCAGAGTTTGCTCGGAGAAAACTTTGCTGCTGACTTCTCTAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCACTTCGAGAGCTAGATAATGATATGTCAAGAGAACTGATGGGTTTGCTTATAAGACAGATGGAGAGTGACAGATCCTATTATCAGTTATGCCATCTTGTGAAGCAATGTG-ACAGCCTAGAGAAGGCTTCTTCTTGCTTGCAGATCTGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E260477" ref_strand="+" ref_description="SGN-E260477 [cLEG-54-G19]">
      <seq>agaaaactctgacctctaaattagaggaggctcgaaattctattcaactcaggattgtgaaagctcttagagaatatcgaaatctccatgctgttcagcaccgtgtggctggaaggatgatttatccagaatctttaaagtacttgccattatatggattagctttatgcaaaacaactgcccttcgcggtggatatgctgatgctcagcttgacgaacgatgtgctgctggatataccatgatggctttgcccgttaaaagattgttgaagcttctatatcctaagttgatccgtatagatgaatatcttctaaaaaaaccatcttcgcgagaggagtctaaagacatcttgaaaggggttccacttacaacagagagcttagatccccagggtctctatctctttgatgatggtttccggtttgtcatctggttcggtagaatgctttctcctaatatgatccagagtttgctcggagaaaactttgctgctgacttctctaaggtttcacttcaagagctagataatgaaatgtcaagagaactgatgggtttgcttaaaagacagagggagagtgacagatcatattatcagttatgccatcttgtgaggcaaggtgaacagcctagagaaggcttcttcttgcttgcaaatctgattgaggatccagttggtggttctattggttaccaggattggattctgcaagtacaccgacnagtccagcaaaatgcataaagggttcctgtatgttcaatcatttgtggtcttctactgtgtggcggttcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="120472" stop="126455"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120772" g_stop="121088" g_length="317"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="317" r_length="317" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="121089" i_stop="121167" i_length="79">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121168" g_stop="121356" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="506" r_length="189" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121357" i_stop="125611" i_length="4255">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="125612" g_stop="125847" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="507" r_stop="742" r_length="236" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="125848" i_stop="126105" i_length="258">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.541" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="126106" g_stop="126155" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="743" r_stop="792" r_length="50" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E260477" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>792</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E260477" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120772" e_stop="121088"/>
          <exon e_start="121168" e_stop="121356"/>
          <exon e_start="125612" e_stop="125847"/>
          <exon e_start="126106" e_stop="126155"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAACTCTGACCTCTAAATTAGAGGAGGCTCGAAATTCTATTCAACTCAGGATTGTGAAAGCTCTTAGAGAATATCGAAATCTCCATGCTGTTCAGCACCGTGTGGCTGGAAGGATGATTTATCCAGAATCTTTAAAGTACTTGCCATTATATGGATTAGCTTTATGCAAAACAACTGCCCTTCGCGGTGGATATGCTGATGCTCAGCTTGACGAACGATGTGCTGCTGGATATACCATGATGGCTTTGCCCGTTAAAAGATTGTTGAAGCTTCTATATCCTAAGTTGATCCGTATAGATGAATATCTTCTAAAAGTAAGCATCTGACAGCCCTTCCACATTGTTGCTGTATTTGCTTTAAAGGTTCTAAAACCTATGATTTTTCTATTTCTAGAAACCATCTTCGCGAGAGGAGTCTAAAGACATCTTGAAAGGGGTTCCACTTACAACAGAGAGCTTAGATCCCCAGGGTCTCTATCTCTTTGATGATGGTTTCCGGTTTGTCATCTGGTTCGGTAGAATGCTTTCTCCTAATATGATCCAGAGTTTGCTCGGAGAAAACTTTGCTGCTGACTTCTCTAAGGTAAGATTTATAGACTGCTGTGTCATCATCACACCATATTAGGAAGGTTCCGTTTGGTACTGAATGGACCAAACGTAAGCCGTATGAAATTTGAATATGCACTTTAAATGCCAACTACTTAGTTACGTAGTTTGGTTTGGATTAAATGGTAAAATCTGATTAGACTTCCGCCAATGAAATGTAGGAAGCCAAAAACAAAGTTCTCATTTTATTTTTCAAAGTGGTTCCATGGATCGTATGTGGAATTGTCTCCAGTATAGATGTTGCTGATTAAAAGGATCTAAATCTCTACTCAGCTTCACCTATAGCATCCTTTTTCTTTCTGGGCAAGCCTCATTTTTCATTTTATGCAGGACCATTAGTTATCTGTTTCTTTTTGTTATAGGTTAGTAACTTTCTGGTCTACTGGGTTATAGATTAGTATCTCCAATCCGTTTTACTTAACTTTGTCGTTTGTCTTCCATAGGTTGTACAGTTGCCATCTTCTGAAATTTGTTCTCTTTATTCTACTTCTGCCCCTCTGGGTTCACACTGATTTACTGACATTTTCCTTATTACTGCATCATCCGAATCTGTGGAATCTATAACATTTCATTAATTTCTTATCTCCTTGTTCTAGCCTGCATGTAGACAGAATTAGTAAAACACAGTTGCTTCTGGTTTAAGCATCTATATTTTTGCTTTTCATCGGATGATGAAGAGCTCTTAAGTTCTCTGCTCTTGTATTTAGCTCTAAATGTTGTAATCTTAACTTTTTTCCACTTTGATGACTATTGTGAGGTTAATTCTGTGTGCCTTCTGTGAGACATATAGGAGAAAATTATTATTGAGTTGTTGTTGCGTCTACATTATTACATTGAGACCCTATTAATAGAACCTAGAATACAATTCTTTACCAAGTAGGTTACTATTTAGTATTCTTATTACTATTCTAATAGGATTGTATAAACCTATCCTATTTTAACACTCCCCCGCAAGCTAGTACATACAATTCATGTACCCAGCTTGTTACAAATGTAATTAACACAAGGACTGATGAGGGGCGTGGTGAGATACCTGCTAGTTGATTCGTCGACTTTACAAAATTGAAGTCAATCTCAATGTACTTGTCTACTCGTTAAATACTGGATTTGATGCATAATGCCAGTATTCCAGTGTTGAACTTCCCAAACCAAACCTGCAAAGATTGCTTCAAACCATAGACTGACACATAATCGACATACAAGGCTACTAAACTCCCCCTGAGCAACAAAGTGCTCAAAACCTAGTGTAAAGTATATGGATCATTTGGAATCAATAGATGAGTCGATATTAAACAAGTCACCACAGAACTGGTTGGAATATGCTCATATGCCGGAGTATTAGATTTTATGGCTAAAGTGGTGACAATCTAAGATATAAAATTATATAGGTAGGGCCGGAATGATATCACGACCCATCTAGAAAATAGAAATTATATAGGATAGTTCAAATTGATGGAACGACCCCATTGAAAAAGTGAACTAATATGGGTAGGTTCAGAATGATGGCACGACAGTGCCGAAAAAGAAAAATTATATGGGTAGGGTAATGATTGCACAACCCTACACAAATCAGATTTGAGGAGTCACCGAAAAGACGAATGGAACTATGCAAATCAAATCTAAGGATTCACTAAAAAGACACGTGATGCTATGCAATTCAGATATTAGAAAATAGTTCAGAAAAATTCACAGTACCACTCAAATCAAATATGAAAAACAGTTCGAAGAGATGCACGGTGCTATGCAAATCAGATTTGCAAAAAAGGTAGTCACCAGAAGAATGACATGGTGCTACACAAATTGTATATGAAAAAGTAGTTGCTGGAATGATGGCACAGTGCTACACAAACCAGATATGAAAAATTAGTCACCGAAAAGATTGCTCGGTGCTGAACTAATTAAATATGAAAAAGTAGTCACTGGAATGATGGCATGGTGCTACACAAGTTAAATATGAAAAAGTAGTCACTGAAATGATGACACGGTGCTACACGAATTAGATATAAGAAAGTAGTCACCTTAATGATGTCACGGTGCTACAAAAATTTGATATGAGAAAATAGTCACTAGAAAGATACATGGTGCCCAACTTTTGCTAACATAATTATTGGCCGGACGGGCAGCATATATGAGTAATAGCCGCCCGCCGGCAGCGGAAGCTCTTTGAGTTTTTATCAATATCGTAAAGGCTCTGATACTATGTGAGAAATATAGGGAAAAAAATATTATTGAATTGTTGTTGTGTCTACATTATTACATTGAGACCCTATTTATAGACCCTATAATACAATTCTTTACCAAGTAGGATACTATTTAGTATTCCTATTCCTATTCTAATAGGATTGTATAACCTATTCCTATTCTAATAGGATTGTATAAACCTATTCCTATTTCAATAGGATTGTATTAATCTATTCCTATTCTAACATTTTTTTTCTAGGTTAACAGGGTCATGCTTAAGATCTAGTCTTTTTGCATTTTTGGGATTCCCTTTTCATTGTTTTCCTAGATATGGATGAGTTGTACTTCAGAAGTACTTCCAGTTGGTTTCATGTTCTGGTTTGTAGGTAGCCTCAGAACTGGATTTCTTTCCCTTTGTGCAAGTTTATACTGAAGGCCCAAAGGTTCAAAACTTCCCATATGATTTCTCTTCCCTGAAGGTATAAAAGAAGTTTCCTGCATATTTGGTTTTCTGAGCATACAACATGCAGTGTTGTGAAAGGCACACTTAAGCCCTAAAGTGAGGGACTAAACACATTGAGCACTTCACCTTGCCTTATAGGCACTTCAGTTTCATCATCAAGGCTCTAAAAGCATACTTTTCCCTGCCAAGGAGTGCAATCCTAAAGATGTGATACTGTACAATTGATATTTCACTTTATTATAATTTTTTTGCGATTTCTTTGTCCATATATTTATTACTCATGCTAGTGATTATTAATCTTGGACTAGTTTTTCTTCATTTGCACCTTTTCTCATTAAAACCCGTGTTGTATTTGCACTTTGCGCTTAAAGCCCCAAAGGACATTAGTCTTTTTGCACTTTCACTTTTGACAACACTGACTGTATGTCAGCAGTACTAATTAGCATCTAACTAGGTTTGCAATGAAAGTATAGCTACTTTGATAACATCCATCGTGTCTGATGAAGGCACATACTCCTTCTGTATCTCAAGTGCTTAGATCTGCTACTTTCCTGAAATAATGAGATTCAAATAGTTGGAATGGAGATATATGGTAAAAGAGAAAGCAAGTGCACTCGATATGTGAGATCATAAGATCTACACCTCACTGACCGAAATTTAGTATGTTACTCTGACAAAATATCAGATGTCAAGATTTAAGGAAGTACTTGGAGGATGGGCAATTTAGCCCTGATAATGATTTTGCATTTTGAAGAAATGACTTCTGTTGCCTTGCAAATTTGAACTTAGTGAGTCAAGAAGGATATTTTTTTTCCTGAATTTTTAAAGATTCTTGTTGAAAAGAGGATGACTATAGGTCTTAAATCCTTGTTTAATTCACTTTTTGCTTACATGTGATATAACGTTCACTAAGAATTTGCAATGTATTCGCCTAGAGGACCTTTCTTTGCTTATGGAAACCTTAAAACATGGGTGTATGGTCCTATGACTATCTCCCAAAAGCTTTAGTGGGCAGAGTTAGCCGGAACCTGTGCTAGTGGGAGATAAGATGTCTGGTGGAATTAATAGAGGTGTGTGCAAGCGGGCCCAGACATGCATCATTAAAAATAGGGTATATGTGCCTCCTTTCTTCTGAATCTAGGTTCCCATTTTCTTTGCACACAAATATAAAGTCGTGTGTTGAAGTATTATTTGAACAGCTCATCACTGAACATCGGTGATATCTTGGCTATCCATAAAAAAGGATTTGTTCTATGGTGCAGCAATACTCTTTTGAAGGGATGTGTTTCTTGCTTATGCCCCCCACCTCATCCCCTGCGTAGAAAAAAAAACAGAAGGAATAAGACATATTTGAGAGTGCAGGGGATTACTTTTCTTGTTAGGACAGAGGAAAACTGAGGCGCAACCCGAGTTGAGACACAACTTATGACAGTTATTTGGAATGGAGGAACCAAGTTTGGCACTCAGCTGGTTTCTTCGCTGATTCAACCCTATGTCCTTCACTGTGTTGATGTTTTGAGACAGCTCCTGCAAATTTTCTGCTTGTCTTTAACTCTCTGATGTGATTTTTTTTTAAATTGTGAATCAGGTTTCACTTCAAGAGCTAGATAATGAAATGTCAAGAGAACTGATGGGTTTGCTTAAAAGACAGAGGGAGAGTGACAGATCATATTATCAGTTATGCCATCTTGTGAGGCAAGGTGAACAGCCTAGAGAAGGCTTCTTCTTGCTTGCAAATCTGATTGAGGATCCAGTTGGTGGTTCTATTGGTTACCAGGATTGGATTCTGCAAGTACACCGACAAGTCCAGCAAAATGCATAAAGGTAATGAAAAGGATTTACTGGTTGTTAATAGTTATAATTCTGTTATGCTTGTATTATTATTGACTTCATCTTTTGGGTGGTACCCAAGTGTTCCAAAAAGAGTGAAGGGTGAATCTTTATTATTGCATTATCTAAATGAAACTGAAACAGATGATGAAGAGATTGCCATCATGGTGATCACCTATGCATTTCTCCTCTCTGAACCTAAAATGATGAGTTTTAGTCTGCTTGCTGATTGAACACTCCCTATTTTAGCAGGGTTCCTGTATGTTCAATCATTTGTGGTCTTCTACTGTGTGGCGGTTCCT</genome_strand>
        <mrna_strand>AGAAAACTCTGACCTCTAAATTAGAGGAGGCTCGAAATTCTATTCAACTCAGGATTGTGAAAGCTCTTAGAGAATATCGAAATCTCCATGCTGTTCAGCACCGTGTGGCTGGAAGGATGATTTATCCAGAATCTTTAAAGTACTTGCCATTATATGGATTAGCTTTATGCAAAACAACTGCCCTTCGCGGTGGATATGCTGATGCTCAGCTTGACGAACGATGTGCTGCTGGATATACCATGATGGCTTTGCCCGTTAAAAGATTGTTGAAGCTTCTATATCCTAAGTTGATCCGTATAGATGAATATCTTCTAAAA...............................................................................AAACCATCTTCGCGAGAGGAGTCTAAAGACATCTTGAAAGGGGTTCCACTTACAACAGAGAGCTTAGATCCCCAGGGTCTCTATCTCTTTGATGATGGTTTCCGGTTTGTCATCTGGTTCGGTAGAATGCTTTCTCCTAATATGATCCAGAGTTTGCTCGGAGAAAACTTTGCTGCTGACTTCTCTAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCACTTCAAGAGCTAGATAATGAAATGTCAAGAGAACTGATGGGTTTGCTTAAAAGACAGAGGGAGAGTGACAGATCATATTATCAGTTATGCCATCTTGTGAGGCAAGGTGAACAGCCTAGAGAAGGCTTCTTCTTGCTTGCAAATCTGATTGAGGATCCAGTTGGTGGTTCTATTGGTTACCAGGATTGGATTCTGCAAGTACACCGACNAGTCCAGCAAAATGCATAAAG..................................................................................................................................................................................................................................................................GGTTCCTGTATGTTCAATCATTTGTGGTCTTCTACTGTGTGGCGGTTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E274653" ref_strand="+" ref_description="SGN-E274653 [cLEN-11-L2]">
      <seq>gagaatatcgaaatctccatgctgttcagcaccgtgtggctggaaggatgatttatccagaatctttaaagtacttgccattatatggattagctttatgcaaaacaactgcccttcgcggtggatatgctgatgctcagcttgacgaacgatgtgctgctggatataccatgatggctttgcccgttaaaagattgttgaagcttctatatcctaagttgatccgtatagatgaatatcttctaaaaaaaccatcttcgcgagaggagtctaaagacatcttgaaaggggttccacttacaacagagagcttagatccccagggtctctatctctttgatgatggtttccggtttgtcatctggttcggtagaatgctttctcctaatatgatccagagtttgctcggagaaaactttgctgctgacttctctaaggtttcacttcaagagctagataatgaaatgtcaagagaactgatgggtttgcttaaaagacagagggagagtgacagatcatattatcagttatgccatcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="120541" stop="126014"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120841" g_stop="121088" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="248" r_length="248" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="121089" i_stop="121167" i_length="79">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121168" g_stop="121356" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="437" r_length="189" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121357" i_stop="125611" i_length="4255">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="125612" g_stop="125714" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="540" r_length="103" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E274653" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E274653" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120841" e_stop="121088"/>
          <exon e_start="121168" e_stop="121356"/>
          <exon e_start="125612" e_stop="125714"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAATATCGAAATCTCCATGCTGTTCAGCACCGTGTGGCTGGAAGGATGATTTATCCAGAATCTTTAAAGTACTTGCCATTATATGGATTAGCTTTATGCAAAACAACTGCCCTTCGCGGTGGATATGCTGATGCTCAGCTTGACGAACGATGTGCTGCTGGATATACCATGATGGCTTTGCCCGTTAAAAGATTGTTGAAGCTTCTATATCCTAAGTTGATCCGTATAGATGAATATCTTCTAAAAGTAAGCATCTGACAGCCCTTCCACATTGTTGCTGTATTTGCTTTAAAGGTTCTAAAACCTATGATTTTTCTATTTCTAGAAACCATCTTCGCGAGAGGAGTCTAAAGACATCTTGAAAGGGGTTCCACTTACAACAGAGAGCTTAGATCCCCAGGGTCTCTATCTCTTTGATGATGGTTTCCGGTTTGTCATCTGGTTCGGTAGAATGCTTTCTCCTAATATGATCCAGAGTTTGCTCGGAGAAAACTTTGCTGCTGACTTCTCTAAGGTAAGATTTATAGACTGCTGTGTCATCATCACACCATATTAGGAAGGTTCCGTTTGGTACTGAATGGACCAAACGTAAGCCGTATGAAATTTGAATATGCACTTTAAATGCCAACTACTTAGTTACGTAGTTTGGTTTGGATTAAATGGTAAAATCTGATTAGACTTCCGCCAATGAAATGTAGGAAGCCAAAAACAAAGTTCTCATTTTATTTTTCAAAGTGGTTCCATGGATCGTATGTGGAATTGTCTCCAGTATAGATGTTGCTGATTAAAAGGATCTAAATCTCTACTCAGCTTCACCTATAGCATCCTTTTTCTTTCTGGGCAAGCCTCATTTTTCATTTTATGCAGGACCATTAGTTATCTGTTTCTTTTTGTTATAGGTTAGTAACTTTCTGGTCTACTGGGTTATAGATTAGTATCTCCAATCCGTTTTACTTAACTTTGTCGTTTGTCTTCCATAGGTTGTACAGTTGCCATCTTCTGAAATTTGTTCTCTTTATTCTACTTCTGCCCCTCTGGGTTCACACTGATTTACTGACATTTTCCTTATTACTGCATCATCCGAATCTGTGGAATCTATAACATTTCATTAATTTCTTATCTCCTTGTTCTAGCCTGCATGTAGACAGAATTAGTAAAACACAGTTGCTTCTGGTTTAAGCATCTATATTTTTGCTTTTCATCGGATGATGAAGAGCTCTTAAGTTCTCTGCTCTTGTATTTAGCTCTAAATGTTGTAATCTTAACTTTTTTCCACTTTGATGACTATTGTGAGGTTAATTCTGTGTGCCTTCTGTGAGACATATAGGAGAAAATTATTATTGAGTTGTTGTTGCGTCTACATTATTACATTGAGACCCTATTAATAGAACCTAGAATACAATTCTTTACCAAGTAGGTTACTATTTAGTATTCTTATTACTATTCTAATAGGATTGTATAAACCTATCCTATTTTAACACTCCCCCGCAAGCTAGTACATACAATTCATGTACCCAGCTTGTTACAAATGTAATTAACACAAGGACTGATGAGGGGCGTGGTGAGATACCTGCTAGTTGATTCGTCGACTTTACAAAATTGAAGTCAATCTCAATGTACTTGTCTACTCGTTAAATACTGGATTTGATGCATAATGCCAGTATTCCAGTGTTGAACTTCCCAAACCAAACCTGCAAAGATTGCTTCAAACCATAGACTGACACATAATCGACATACAAGGCTACTAAACTCCCCCTGAGCAACAAAGTGCTCAAAACCTAGTGTAAAGTATATGGATCATTTGGAATCAATAGATGAGTCGATATTAAACAAGTCACCACAGAACTGGTTGGAATATGCTCATATGCCGGAGTATTAGATTTTATGGCTAAAGTGGTGACAATCTAAGATATAAAATTATATAGGTAGGGCCGGAATGATATCACGACCCATCTAGAAAATAGAAATTATATAGGATAGTTCAAATTGATGGAACGACCCCATTGAAAAAGTGAACTAATATGGGTAGGTTCAGAATGATGGCACGACAGTGCCGAAAAAGAAAAATTATATGGGTAGGGTAATGATTGCACAACCCTACACAAATCAGATTTGAGGAGTCACCGAAAAGACGAATGGAACTATGCAAATCAAATCTAAGGATTCACTAAAAAGACACGTGATGCTATGCAATTCAGATATTAGAAAATAGTTCAGAAAAATTCACAGTACCACTCAAATCAAATATGAAAAACAGTTCGAAGAGATGCACGGTGCTATGCAAATCAGATTTGCAAAAAAGGTAGTCACCAGAAGAATGACATGGTGCTACACAAATTGTATATGAAAAAGTAGTTGCTGGAATGATGGCACAGTGCTACACAAACCAGATATGAAAAATTAGTCACCGAAAAGATTGCTCGGTGCTGAACTAATTAAATATGAAAAAGTAGTCACTGGAATGATGGCATGGTGCTACACAAGTTAAATATGAAAAAGTAGTCACTGAAATGATGACACGGTGCTACACGAATTAGATATAAGAAAGTAGTCACCTTAATGATGTCACGGTGCTACAAAAATTTGATATGAGAAAATAGTCACTAGAAAGATACATGGTGCCCAACTTTTGCTAACATAATTATTGGCCGGACGGGCAGCATATATGAGTAATAGCCGCCCGCCGGCAGCGGAAGCTCTTTGAGTTTTTATCAATATCGTAAAGGCTCTGATACTATGTGAGAAATATAGGGAAAAAAATATTATTGAATTGTTGTTGTGTCTACATTATTACATTGAGACCCTATTTATAGACCCTATAATACAATTCTTTACCAAGTAGGATACTATTTAGTATTCCTATTCCTATTCTAATAGGATTGTATAACCTATTCCTATTCTAATAGGATTGTATAAACCTATTCCTATTTCAATAGGATTGTATTAATCTATTCCTATTCTAACATTTTTTTTCTAGGTTAACAGGGTCATGCTTAAGATCTAGTCTTTTTGCATTTTTGGGATTCCCTTTTCATTGTTTTCCTAGATATGGATGAGTTGTACTTCAGAAGTACTTCCAGTTGGTTTCATGTTCTGGTTTGTAGGTAGCCTCAGAACTGGATTTCTTTCCCTTTGTGCAAGTTTATACTGAAGGCCCAAAGGTTCAAAACTTCCCATATGATTTCTCTTCCCTGAAGGTATAAAAGAAGTTTCCTGCATATTTGGTTTTCTGAGCATACAACATGCAGTGTTGTGAAAGGCACACTTAAGCCCTAAAGTGAGGGACTAAACACATTGAGCACTTCACCTTGCCTTATAGGCACTTCAGTTTCATCATCAAGGCTCTAAAAGCATACTTTTCCCTGCCAAGGAGTGCAATCCTAAAGATGTGATACTGTACAATTGATATTTCACTTTATTATAATTTTTTTGCGATTTCTTTGTCCATATATTTATTACTCATGCTAGTGATTATTAATCTTGGACTAGTTTTTCTTCATTTGCACCTTTTCTCATTAAAACCCGTGTTGTATTTGCACTTTGCGCTTAAAGCCCCAAAGGACATTAGTCTTTTTGCACTTTCACTTTTGACAACACTGACTGTATGTCAGCAGTACTAATTAGCATCTAACTAGGTTTGCAATGAAAGTATAGCTACTTTGATAACATCCATCGTGTCTGATGAAGGCACATACTCCTTCTGTATCTCAAGTGCTTAGATCTGCTACTTTCCTGAAATAATGAGATTCAAATAGTTGGAATGGAGATATATGGTAAAAGAGAAAGCAAGTGCACTCGATATGTGAGATCATAAGATCTACACCTCACTGACCGAAATTTAGTATGTTACTCTGACAAAATATCAGATGTCAAGATTTAAGGAAGTACTTGGAGGATGGGCAATTTAGCCCTGATAATGATTTTGCATTTTGAAGAAATGACTTCTGTTGCCTTGCAAATTTGAACTTAGTGAGTCAAGAAGGATATTTTTTTTCCTGAATTTTTAAAGATTCTTGTTGAAAAGAGGATGACTATAGGTCTTAAATCCTTGTTTAATTCACTTTTTGCTTACATGTGATATAACGTTCACTAAGAATTTGCAATGTATTCGCCTAGAGGACCTTTCTTTGCTTATGGAAACCTTAAAACATGGGTGTATGGTCCTATGACTATCTCCCAAAAGCTTTAGTGGGCAGAGTTAGCCGGAACCTGTGCTAGTGGGAGATAAGATGTCTGGTGGAATTAATAGAGGTGTGTGCAAGCGGGCCCAGACATGCATCATTAAAAATAGGGTATATGTGCCTCCTTTCTTCTGAATCTAGGTTCCCATTTTCTTTGCACACAAATATAAAGTCGTGTGTTGAAGTATTATTTGAACAGCTCATCACTGAACATCGGTGATATCTTGGCTATCCATAAAAAAGGATTTGTTCTATGGTGCAGCAATACTCTTTTGAAGGGATGTGTTTCTTGCTTATGCCCCCCACCTCATCCCCTGCGTAGAAAAAAAAACAGAAGGAATAAGACATATTTGAGAGTGCAGGGGATTACTTTTCTTGTTAGGACAGAGGAAAACTGAGGCGCAACCCGAGTTGAGACACAACTTATGACAGTTATTTGGAATGGAGGAACCAAGTTTGGCACTCAGCTGGTTTCTTCGCTGATTCAACCCTATGTCCTTCACTGTGTTGATGTTTTGAGACAGCTCCTGCAAATTTTCTGCTTGTCTTTAACTCTCTGATGTGATTTTTTTTTAAATTGTGAATCAGGTTTCACTTCAAGAGCTAGATAATGAAATGTCAAGAGAACTGATGGGTTTGCTTAAAAGACAGAGGGAGAGTGACAGATCATATTATCAGTTATGCCATCTTG</genome_strand>
        <mrna_strand>GAGAATATCGAAATCTCCATGCTGTTCAGCACCGTGTGGCTGGAAGGATGATTTATCCAGAATCTTTAAAGTACTTGCCATTATATGGATTAGCTTTATGCAAAACAACTGCCCTTCGCGGTGGATATGCTGATGCTCAGCTTGACGAACGATGTGCTGCTGGATATACCATGATGGCTTTGCCCGTTAAAAGATTGTTGAAGCTTCTATATCCTAAGTTGATCCGTATAGATGAATATCTTCTAAAA...............................................................................AAACCATCTTCGCGAGAGGAGTCTAAAGACATCTTGAAAGGGGTTCCACTTACAACAGAGAGCTTAGATCCCCAGGGTCTCTATCTCTTTGATGATGGTTTCCGGTTTGTCATCTGGTTCGGTAGAATGCTTTCTCCTAATATGATCCAGAGTTTGCTCGGAGAAAACTTTGCTGCTGACTTCTCTAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCACTTCAAGAGCTAGATAATGAAATGTCAAGAGAACTGATGGGTTTGCTTAAAAGACAGAGGGAGAGTGACAGATCATATTATCAGTTATGCCATCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E274654" ref_strand="+" ref_description="SGN-E274654 [cLEN-11-L4]">
      <seq>tataccatgatgggtttggccgttaaaagattgatgaagcttctatatcctaagttgatccggatagatgaatattttctaaaaaaaccatctcagcgagaggagtctaaagacatcttgaaaggggttccacttacaacagagagcttaaatccccagggtctctatctctttgatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="120705" stop="121563"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121005" g_stop="121088" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="121089" i_stop="121167" i_length="79">
            <donor d_prob="0.923" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121168" g_stop="121263" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="180" r_length="96" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E274654" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>180</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E274654" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121005" e_stop="121088"/>
          <exon e_start="121168" e_stop="121263"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATACCATGATGGCTTTGCCCGTTAAAAGATTGTTGAAGCTTCTATATCCTAAGTTGATCCGTATAGATGAATATCTTCTAAAAGTAAGCATCTGACAGCCCTTCCACATTGTTGCTGTATTTGCTTTAAAGGTTCTAAAACCTATGATTTTTCTATTTCTAGAAACCATCTTCGCGAGAGGAGTCTAAAGACATCTTGAAAGGGGTTCCACTTACAACAGAGAGCTTAGATCCCCAGGGTCTCTATCTCTTTGATGAT</genome_strand>
        <mrna_strand>TATACCATGATGGGTTTGGCCGTTAAAAGATTGATGAAGCTTCTATATCCTAAGTTGATCCGGATAGATGAATATTTTCTAAAA...............................................................................AAACCATCTCAGCGAGAGGAGTCTAAAGACATCTTGAAAGGGGTTCCACTTACAACAGAGAGCTTAAATCCCCAGGGTCTCTATCTCTTTGATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E708485" ref_strand="+" ref_description="SGN-E708485 [FA35DF02]">
      <seq>acgatttcttgaaaggggttccacttacaacagagagcttagatccccagggtctctatctctttgatgatggtttccggtttgtcatctggttcggtagaatgctttctcctaatatgatccagagtttgctcggagaaaactttgctgctgacttctctaaggtttcacttcaagagctagataatgaaatgtcaagagaactgatgggtttgcttaaaagacagagggagagtgacagatcatattatcagttatgccatcttgtgaggcaaggtgaacagcctagagaaggcttcttcttgcttgcaaatctgattgaggatccagttggtggttctattggttaccaggattggattctgcaagtacaccgacaagtccagcaaaatgcataaagcagggttcctgtatgttcaatcatttgtggtcttctactgtgtggcggttcctgaagaagttggaacttgttgccacttgcaactatggatggttcatccaatgagcaaaagcttccatggaagaaatctgctgttagtgttaattgacaccattgattgctgagcttacctgattttccttgtaacattagttgaagaactaatatttctcctcatgttgggatcatttcatacacctggaccagccatgcattatgatgtgggagcaggaagattgtgatcgtccttaaatgctagcattaccccgctgccccatttgcttggggtgaacatgaaaaaaatgctaattgactagtatttattttcacgtgttggtctggttagagtgagatgagacattaaatagaacaatgttgcagttatttatattcttgatgttgtggggatagggtatgcgtttgagtgggatttatttagactttttgtaaagatcttgtacatgcatttgctttgcttaactgaatttttttttctgcccgtaataaatttttgttgagctgaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="120895" stop="126966"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121193" g_stop="121356" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="164" r_length="164" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="121357" i_stop="125611" i_length="4255">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="125612" g_stop="125847" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="400" r_length="236" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="125848" i_stop="126102" i_length="255">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126103" g_stop="126677" g_length="575"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="975" r_length="575" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E708485" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>975</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E708485" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121193" e_stop="121356"/>
          <exon e_start="125612" e_stop="125847"/>
          <exon e_start="126103" e_stop="126677"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGACATCTTGAAAGGGGTTCCACTTACAACAGAGAGCTTAGATCCCCAGGGTCTCTATCTCTTTGATGATGGTTTCCGGTTTGTCATCTGGTTCGGTAGAATGCTTTCTCCTAATATGATCCAGAGTTTGCTCGGAGAAAACTTTGCTGCTGACTTCTCTAAGGTAAGATTTATAGACTGCTGTGTCATCATCACACCATATTAGGAAGGTTCCGTTTGGTACTGAATGGACCAAACGTAAGCCGTATGAAATTTGAATATGCACTTTAAATGCCAACTACTTAGTTACGTAGTTTGGTTTGGATTAAATGGTAAAATCTGATTAGACTTCCGCCAATGAAATGTAGGAAGCCAAAAACAAAGTTCTCATTTTATTTTTCAAAGTGGTTCCATGGATCGTATGTGGAATTGTCTCCAGTATAGATGTTGCTGATTAAAAGGATCTAAATCTCTACTCAGCTTCACCTATAGCATCCTTTTTCTTTCTGGGCAAGCCTCATTTTTCATTTTATGCAGGACCATTAGTTATCTGTTTCTTTTTGTTATAGGTTAGTAACTTTCTGGTCTACTGGGTTATAGATTAGTATCTCCAATCCGTTTTACTTAACTTTGTCGTTTGTCTTCCATAGGTTGTACAGTTGCCATCTTCTGAAATTTGTTCTCTTTATTCTACTTCTGCCCCTCTGGGTTCACACTGATTTACTGACATTTTCCTTATTACTGCATCATCCGAATCTGTGGAATCTATAACATTTCATTAATTTCTTATCTCCTTGTTCTAGCCTGCATGTAGACAGAATTAGTAAAACACAGTTGCTTCTGGTTTAAGCATCTATATTTTTGCTTTTCATCGGATGATGAAGAGCTCTTAAGTTCTCTGCTCTTGTATTTAGCTCTAAATGTTGTAATCTTAACTTTTTTCCACTTTGATGACTATTGTGAGGTTAATTCTGTGTGCCTTCTGTGAGACATATAGGAGAAAATTATTATTGAGTTGTTGTTGCGTCTACATTATTACATTGAGACCCTATTAATAGAACCTAGAATACAATTCTTTACCAAGTAGGTTACTATTTAGTATTCTTATTACTATTCTAATAGGATTGTATAAACCTATCCTATTTTAACACTCCCCCGCAAGCTAGTACATACAATTCATGTACCCAGCTTGTTACAAATGTAATTAACACAAGGACTGATGAGGGGCGTGGTGAGATACCTGCTAGTTGATTCGTCGACTTTACAAAATTGAAGTCAATCTCAATGTACTTGTCTACTCGTTAAATACTGGATTTGATGCATAATGCCAGTATTCCAGTGTTGAACTTCCCAAACCAAACCTGCAAAGATTGCTTCAAACCATAGACTGACACATAATCGACATACAAGGCTACTAAACTCCCCCTGAGCAACAAAGTGCTCAAAACCTAGTGTAAAGTATATGGATCATTTGGAATCAATAGATGAGTCGATATTAAACAAGTCACCACAGAACTGGTTGGAATATGCTCATATGCCGGAGTATTAGATTTTATGGCTAAAGTGGTGACAATCTAAGATATAAAATTATATAGGTAGGGCCGGAATGATATCACGACCCATCTAGAAAATAGAAATTATATAGGATAGTTCAAATTGATGGAACGACCCCATTGAAAAAGTGAACTAATATGGGTAGGTTCAGAATGATGGCACGACAGTGCCGAAAAAGAAAAATTATATGGGTAGGGTAATGATTGCACAACCCTACACAAATCAGATTTGAGGAGTCACCGAAAAGACGAATGGAACTATGCAAATCAAATCTAAGGATTCACTAAAAAGACACGTGATGCTATGCAATTCAGATATTAGAAAATAGTTCAGAAAAATTCACAGTACCACTCAAATCAAATATGAAAAACAGTTCGAAGAGATGCACGGTGCTATGCAAATCAGATTTGCAAAAAAGGTAGTCACCAGAAGAATGACATGGTGCTACACAAATTGTATATGAAAAAGTAGTTGCTGGAATGATGGCACAGTGCTACACAAACCAGATATGAAAAATTAGTCACCGAAAAGATTGCTCGGTGCTGAACTAATTAAATATGAAAAAGTAGTCACTGGAATGATGGCATGGTGCTACACAAGTTAAATATGAAAAAGTAGTCACTGAAATGATGACACGGTGCTACACGAATTAGATATAAGAAAGTAGTCACCTTAATGATGTCACGGTGCTACAAAAATTTGATATGAGAAAATAGTCACTAGAAAGATACATGGTGCCCAACTTTTGCTAACATAATTATTGGCCGGACGGGCAGCATATATGAGTAATAGCCGCCCGCCGGCAGCGGAAGCTCTTTGAGTTTTTATCAATATCGTAAAGGCTCTGATACTATGTGAGAAATATAGGGAAAAAAATATTATTGAATTGTTGTTGTGTCTACATTATTACATTGAGACCCTATTTATAGACCCTATAATACAATTCTTTACCAAGTAGGATACTATTTAGTATTCCTATTCCTATTCTAATAGGATTGTATAACCTATTCCTATTCTAATAGGATTGTATAAACCTATTCCTATTTCAATAGGATTGTATTAATCTATTCCTATTCTAACATTTTTTTTCTAGGTTAACAGGGTCATGCTTAAGATCTAGTCTTTTTGCATTTTTGGGATTCCCTTTTCATTGTTTTCCTAGATATGGATGAGTTGTACTTCAGAAGTACTTCCAGTTGGTTTCATGTTCTGGTTTGTAGGTAGCCTCAGAACTGGATTTCTTTCCCTTTGTGCAAGTTTATACTGAAGGCCCAAAGGTTCAAAACTTCCCATATGATTTCTCTTCCCTGAAGGTATAAAAGAAGTTTCCTGCATATTTGGTTTTCTGAGCATACAACATGCAGTGTTGTGAAAGGCACACTTAAGCCCTAAAGTGAGGGACTAAACACATTGAGCACTTCACCTTGCCTTATAGGCACTTCAGTTTCATCATCAAGGCTCTAAAAGCATACTTTTCCCTGCCAAGGAGTGCAATCCTAAAGATGTGATACTGTACAATTGATATTTCACTTTATTATAATTTTTTTGCGATTTCTTTGTCCATATATTTATTACTCATGCTAGTGATTATTAATCTTGGACTAGTTTTTCTTCATTTGCACCTTTTCTCATTAAAACCCGTGTTGTATTTGCACTTTGCGCTTAAAGCCCCAAAGGACATTAGTCTTTTTGCACTTTCACTTTTGACAACACTGACTGTATGTCAGCAGTACTAATTAGCATCTAACTAGGTTTGCAATGAAAGTATAGCTACTTTGATAACATCCATCGTGTCTGATGAAGGCACATACTCCTTCTGTATCTCAAGTGCTTAGATCTGCTACTTTCCTGAAATAATGAGATTCAAATAGTTGGAATGGAGATATATGGTAAAAGAGAAAGCAAGTGCACTCGATATGTGAGATCATAAGATCTACACCTCACTGACCGAAATTTAGTATGTTACTCTGACAAAATATCAGATGTCAAGATTTAAGGAAGTACTTGGAGGATGGGCAATTTAGCCCTGATAATGATTTTGCATTTTGAAGAAATGACTTCTGTTGCCTTGCAAATTTGAACTTAGTGAGTCAAGAAGGATATTTTTTTTCCTGAATTTTTAAAGATTCTTGTTGAAAAGAGGATGACTATAGGTCTTAAATCCTTGTTTAATTCACTTTTTGCTTACATGTGATATAACGTTCACTAAGAATTTGCAATGTATTCGCCTAGAGGACCTTTCTTTGCTTATGGAAACCTTAAAACATGGGTGTATGGTCCTATGACTATCTCCCAAAAGCTTTAGTGGGCAGAGTTAGCCGGAACCTGTGCTAGTGGGAGATAAGATGTCTGGTGGAATTAATAGAGGTGTGTGCAAGCGGGCCCAGACATGCATCATTAAAAATAGGGTATATGTGCCTCCTTTCTTCTGAATCTAGGTTCCCATTTTCTTTGCACACAAATATAAAGTCGTGTGTTGAAGTATTATTTGAACAGCTCATCACTGAACATCGGTGATATCTTGGCTATCCATAAAAAAGGATTTGTTCTATGGTGCAGCAATACTCTTTTGAAGGGATGTGTTTCTTGCTTATGCCCCCCACCTCATCCCCTGCGTAGAAAAAAAAACAGAAGGAATAAGACATATTTGAGAGTGCAGGGGATTACTTTTCTTGTTAGGACAGAGGAAAACTGAGGCGCAACCCGAGTTGAGACACAACTTATGACAGTTATTTGGAATGGAGGAACCAAGTTTGGCACTCAGCTGGTTTCTTCGCTGATTCAACCCTATGTCCTTCACTGTGTTGATGTTTTGAGACAGCTCCTGCAAATTTTCTGCTTGTCTTTAACTCTCTGATGTGATTTTTTTTTAAATTGTGAATCAGGTTTCACTTCAAGAGCTAGATAATGAAATGTCAAGAGAACTGATGGGTTTGCTTAAAAGACAGAGGGAGAGTGACAGATCATATTATCAGTTATGCCATCTTGTGAGGCAAGGTGAACAGCCTAGAGAAGGCTTCTTCTTGCTTGCAAATCTGATTGAGGATCCAGTTGGTGGTTCTATTGGTTACCAGGATTGGATTCTGCAAGTACACCGACAAGTCCAGCAAAATGCATAAAGGTAATGAAAAGGATTTACTGGTTGTTAATAGTTATAATTCTGTTATGCTTGTATTATTATTGACTTCATCTTTTGGGTGGTACCCAAGTGTTCCAAAAAGAGTGAAGGGTGAATCTTTATTATTGCATTATCTAAATGAAACTGAAACAGATGATGAAGAGATTGCCATCATGGTGATCACCTATGCATTTCTCCTCTCTGAACCTAAAATGATGAGTTTTAGTCTGCTTGCTGATTGAACACTCCCTATTTTAGCAGGGTTCCTGTATGTTCAATCATTTGTGGTCTTCTACTGTGTGGCGGTTCCTGAAGAAGTTGGAACTTGTTGCCACTTGCAACTATGGATGGTTCATCCAATGAGCAAAAGCTTCCATGGAAGAAATCTGCTGTTAGTGTTAATTGACACCATTGATTGCTGAGCTTACCTGATTTTCCTTGTAACATTAGTTGAAGAACTAATATTTCTCCTCATGTTGGGATCATTTCATACACCTGGACCAGCCATGCATTATGATGTGGGAGCAGGAAGATTGTGATCGTCCTTAAATGCTAGCATTACCCCGCTGCCCCATTTGCTTGGGGTGAACATGAAAAAAATGCTAATTGACTAGTATTTATTTTCACGTGTTGGTCTGGTTAGAGTGAGATGAGACATTAAATAGAACAATGTTGCAGTTATTTATATTCTTGATGTTGTGGGGATAGGGTATGCGTTTGAGTGGGATTTATTTAGACTTTTTGTAGAGATCTTGTACATGCATTTGCTTTGCATAACTGAATTTTTTTTGCTGCCCGTAATAAATTTTTGTTGAGCTGAAATGTAGTGCAGA</genome_strand>
        <mrna_strand>ACGATTTCTTGAAAGGGGTTCCACTTACAACAGAGAGCTTAGATCCCCAGGGTCTCTATCTCTTTGATGATGGTTTCCGGTTTGTCATCTGGTTCGGTAGAATGCTTTCTCCTAATATGATCCAGAGTTTGCTCGGAGAAAACTTTGCTGCTGACTTCTCTAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCACTTCAAGAGCTAGATAATGAAATGTCAAGAGAACTGATGGGTTTGCTTAAAAGACAGAGGGAGAGTGACAGATCATATTATCAGTTATGCCATCTTGTGAGGCAAGGTGAACAGCCTAGAGAAGGCTTCTTCTTGCTTGCAAATCTGATTGAGGATCCAGTTGGTGGTTCTATTGGTTACCAGGATTGGATTCTGCAAGTACACCGACAAGTCCAGCAAAATGCATAAAG...............................................................................................................................................................................................................................................................CAGGGTTCCTGTATGTTCAATCATTTGTGGTCTTCTACTGTGTGGCGGTTCCTGAAGAAGTTGGAACTTGTTGCCACTTGCAACTATGGATGGTTCATCCAATGAGCAAAAGCTTCCATGGAAGAAATCTGCTGTTAGTGTTAATTGACACCATTGATTGCTGAGCTTACCTGATTTTCCTTGTAACATTAGTTGAAGAACTAATATTTCTCCTCATGTTGGGATCATTTCATACACCTGGACCAGCCATGCATTATGATGTGGGAGCAGGAAGATTGTGATCGTCCTTAAATGCTAGCATTACCCCGCTGCCCCATTTGCTTGGGGTGAACATGAAAAAAATGCTAATTGACTAGTATTTATTTTCACGTGTTGGTCTGGTTAGAGTGAGATGAGACATTAAATAGAACAATGTTGCAGTTATTTATATTCTTGATGTTGTGGGGATAGGGTATGCGTTTGAGTGGGATTTATTTAGACTTTTTGTAAAGATCTTGTACATGCATTTGCTTTGCTTAACTGAATTTTTTTTTCTGCCCGTAATAAATTTTTGTTGAGCTGAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E256945" ref_strand="+" ref_description="SGN-E256945 [cLEG-44-O16]">
      <seq>ggtttccggtttgtcatctggttcggtagaatgcctttctcctaatatgatccagagtttgctcggagaaaactttgctgctgaccttctctaaggtttcacttcaagagctagataatgaaatgtcaagagaactgatgggtttgcttaaaagacagagggagagtgacagatcatattatcagttatgccatcttgtgaggcaaggtgaacagcctagagaaggcttcttcttgcttgcaaatctgattgaggatccagttggtggttctattggttaccaggattggattctgcaagtacaccgacaagtccagcaaaatgcataaagggttcctgtatgttcaatcatttgtggtcttctactgtgtggcggttcctgaagaagttggaacttgttgccacttgcaactatggatggttcatccaatgagcaaaagcttccatggaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="120964" stop="126528"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121264" g_stop="121356" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="0.957"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="121357" i_stop="125611" i_length="4255">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="125612" g_stop="125847" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="331" r_length="236" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="125848" i_stop="126105" i_length="258">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.541" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126106" g_stop="126228" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="454" r_length="123" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E256945" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>452</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E256945" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121264" e_stop="121356"/>
          <exon e_start="125612" e_stop="125847"/>
          <exon e_start="126106" e_stop="126228"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTTCCGGTTTGTCATCTGGTTCGGTAGAATG-CTTTCTCCTAATATGATCCAGAGTTTGCTCGGAGAAAACTTTGCTGCTGA-CTTCTCTAAGGTAAGATTTATAGACTGCTGTGTCATCATCACACCATATTAGGAAGGTTCCGTTTGGTACTGAATGGACCAAACGTAAGCCGTATGAAATTTGAATATGCACTTTAAATGCCAACTACTTAGTTACGTAGTTTGGTTTGGATTAAATGGTAAAATCTGATTAGACTTCCGCCAATGAAATGTAGGAAGCCAAAAACAAAGTTCTCATTTTATTTTTCAAAGTGGTTCCATGGATCGTATGTGGAATTGTCTCCAGTATAGATGTTGCTGATTAAAAGGATCTAAATCTCTACTCAGCTTCACCTATAGCATCCTTTTTCTTTCTGGGCAAGCCTCATTTTTCATTTTATGCAGGACCATTAGTTATCTGTTTCTTTTTGTTATAGGTTAGTAACTTTCTGGTCTACTGGGTTATAGATTAGTATCTCCAATCCGTTTTACTTAACTTTGTCGTTTGTCTTCCATAGGTTGTACAGTTGCCATCTTCTGAAATTTGTTCTCTTTATTCTACTTCTGCCCCTCTGGGTTCACACTGATTTACTGACATTTTCCTTATTACTGCATCATCCGAATCTGTGGAATCTATAACATTTCATTAATTTCTTATCTCCTTGTTCTAGCCTGCATGTAGACAGAATTAGTAAAACACAGTTGCTTCTGGTTTAAGCATCTATATTTTTGCTTTTCATCGGATGATGAAGAGCTCTTAAGTTCTCTGCTCTTGTATTTAGCTCTAAATGTTGTAATCTTAACTTTTTTCCACTTTGATGACTATTGTGAGGTTAATTCTGTGTGCCTTCTGTGAGACATATAGGAGAAAATTATTATTGAGTTGTTGTTGCGTCTACATTATTACATTGAGACCCTATTAATAGAACCTAGAATACAATTCTTTACCAAGTAGGTTACTATTTAGTATTCTTATTACTATTCTAATAGGATTGTATAAACCTATCCTATTTTAACACTCCCCCGCAAGCTAGTACATACAATTCATGTACCCAGCTTGTTACAAATGTAATTAACACAAGGACTGATGAGGGGCGTGGTGAGATACCTGCTAGTTGATTCGTCGACTTTACAAAATTGAAGTCAATCTCAATGTACTTGTCTACTCGTTAAATACTGGATTTGATGCATAATGCCAGTATTCCAGTGTTGAACTTCCCAAACCAAACCTGCAAAGATTGCTTCAAACCATAGACTGACACATAATCGACATACAAGGCTACTAAACTCCCCCTGAGCAACAAAGTGCTCAAAACCTAGTGTAAAGTATATGGATCATTTGGAATCAATAGATGAGTCGATATTAAACAAGTCACCACAGAACTGGTTGGAATATGCTCATATGCCGGAGTATTAGATTTTATGGCTAAAGTGGTGACAATCTAAGATATAAAATTATATAGGTAGGGCCGGAATGATATCACGACCCATCTAGAAAATAGAAATTATATAGGATAGTTCAAATTGATGGAACGACCCCATTGAAAAAGTGAACTAATATGGGTAGGTTCAGAATGATGGCACGACAGTGCCGAAAAAGAAAAATTATATGGGTAGGGTAATGATTGCACAACCCTACACAAATCAGATTTGAGGAGTCACCGAAAAGACGAATGGAACTATGCAAATCAAATCTAAGGATTCACTAAAAAGACACGTGATGCTATGCAATTCAGATATTAGAAAATAGTTCAGAAAAATTCACAGTACCACTCAAATCAAATATGAAAAACAGTTCGAAGAGATGCACGGTGCTATGCAAATCAGATTTGCAAAAAAGGTAGTCACCAGAAGAATGACATGGTGCTACACAAATTGTATATGAAAAAGTAGTTGCTGGAATGATGGCACAGTGCTACACAAACCAGATATGAAAAATTAGTCACCGAAAAGATTGCTCGGTGCTGAACTAATTAAATATGAAAAAGTAGTCACTGGAATGATGGCATGGTGCTACACAAGTTAAATATGAAAAAGTAGTCACTGAAATGATGACACGGTGCTACACGAATTAGATATAAGAAAGTAGTCACCTTAATGATGTCACGGTGCTACAAAAATTTGATATGAGAAAATAGTCACTAGAAAGATACATGGTGCCCAACTTTTGCTAACATAATTATTGGCCGGACGGGCAGCATATATGAGTAATAGCCGCCCGCCGGCAGCGGAAGCTCTTTGAGTTTTTATCAATATCGTAAAGGCTCTGATACTATGTGAGAAATATAGGGAAAAAAATATTATTGAATTGTTGTTGTGTCTACATTATTACATTGAGACCCTATTTATAGACCCTATAATACAATTCTTTACCAAGTAGGATACTATTTAGTATTCCTATTCCTATTCTAATAGGATTGTATAACCTATTCCTATTCTAATAGGATTGTATAAACCTATTCCTATTTCAATAGGATTGTATTAATCTATTCCTATTCTAACATTTTTTTTCTAGGTTAACAGGGTCATGCTTAAGATCTAGTCTTTTTGCATTTTTGGGATTCCCTTTTCATTGTTTTCCTAGATATGGATGAGTTGTACTTCAGAAGTACTTCCAGTTGGTTTCATGTTCTGGTTTGTAGGTAGCCTCAGAACTGGATTTCTTTCCCTTTGTGCAAGTTTATACTGAAGGCCCAAAGGTTCAAAACTTCCCATATGATTTCTCTTCCCTGAAGGTATAAAAGAAGTTTCCTGCATATTTGGTTTTCTGAGCATACAACATGCAGTGTTGTGAAAGGCACACTTAAGCCCTAAAGTGAGGGACTAAACACATTGAGCACTTCACCTTGCCTTATAGGCACTTCAGTTTCATCATCAAGGCTCTAAAAGCATACTTTTCCCTGCCAAGGAGTGCAATCCTAAAGATGTGATACTGTACAATTGATATTTCACTTTATTATAATTTTTTTGCGATTTCTTTGTCCATATATTTATTACTCATGCTAGTGATTATTAATCTTGGACTAGTTTTTCTTCATTTGCACCTTTTCTCATTAAAACCCGTGTTGTATTTGCACTTTGCGCTTAAAGCCCCAAAGGACATTAGTCTTTTTGCACTTTCACTTTTGACAACACTGACTGTATGTCAGCAGTACTAATTAGCATCTAACTAGGTTTGCAATGAAAGTATAGCTACTTTGATAACATCCATCGTGTCTGATGAAGGCACATACTCCTTCTGTATCTCAAGTGCTTAGATCTGCTACTTTCCTGAAATAATGAGATTCAAATAGTTGGAATGGAGATATATGGTAAAAGAGAAAGCAAGTGCACTCGATATGTGAGATCATAAGATCTACACCTCACTGACCGAAATTTAGTATGTTACTCTGACAAAATATCAGATGTCAAGATTTAAGGAAGTACTTGGAGGATGGGCAATTTAGCCCTGATAATGATTTTGCATTTTGAAGAAATGACTTCTGTTGCCTTGCAAATTTGAACTTAGTGAGTCAAGAAGGATATTTTTTTTCCTGAATTTTTAAAGATTCTTGTTGAAAAGAGGATGACTATAGGTCTTAAATCCTTGTTTAATTCACTTTTTGCTTACATGTGATATAACGTTCACTAAGAATTTGCAATGTATTCGCCTAGAGGACCTTTCTTTGCTTATGGAAACCTTAAAACATGGGTGTATGGTCCTATGACTATCTCCCAAAAGCTTTAGTGGGCAGAGTTAGCCGGAACCTGTGCTAGTGGGAGATAAGATGTCTGGTGGAATTAATAGAGGTGTGTGCAAGCGGGCCCAGACATGCATCATTAAAAATAGGGTATATGTGCCTCCTTTCTTCTGAATCTAGGTTCCCATTTTCTTTGCACACAAATATAAAGTCGTGTGTTGAAGTATTATTTGAACAGCTCATCACTGAACATCGGTGATATCTTGGCTATCCATAAAAAAGGATTTGTTCTATGGTGCAGCAATACTCTTTTGAAGGGATGTGTTTCTTGCTTATGCCCCCCACCTCATCCCCTGCGTAGAAAAAAAAACAGAAGGAATAAGACATATTTGAGAGTGCAGGGGATTACTTTTCTTGTTAGGACAGAGGAAAACTGAGGCGCAACCCGAGTTGAGACACAACTTATGACAGTTATTTGGAATGGAGGAACCAAGTTTGGCACTCAGCTGGTTTCTTCGCTGATTCAACCCTATGTCCTTCACTGTGTTGATGTTTTGAGACAGCTCCTGCAAATTTTCTGCTTGTCTTTAACTCTCTGATGTGATTTTTTTTTAAATTGTGAATCAGGTTTCACTTCAAGAGCTAGATAATGAAATGTCAAGAGAACTGATGGGTTTGCTTAAAAGACAGAGGGAGAGTGACAGATCATATTATCAGTTATGCCATCTTGTGAGGCAAGGTGAACAGCCTAGAGAAGGCTTCTTCTTGCTTGCAAATCTGATTGAGGATCCAGTTGGTGGTTCTATTGGTTACCAGGATTGGATTCTGCAAGTACACCGACAAGTCCAGCAAAATGCATAAAGGTAATGAAAAGGATTTACTGGTTGTTAATAGTTATAATTCTGTTATGCTTGTATTATTATTGACTTCATCTTTTGGGTGGTACCCAAGTGTTCCAAAAAGAGTGAAGGGTGAATCTTTATTATTGCATTATCTAAATGAAACTGAAACAGATGATGAAGAGATTGCCATCATGGTGATCACCTATGCATTTCTCCTCTCTGAACCTAAAATGATGAGTTTTAGTCTGCTTGCTGATTGAACACTCCCTATTTTAGCAGGGTTCCTGTATGTTCAATCATTTGTGGTCTTCTACTGTGTGGCGGTTCCTGAAGAAGTTGGAACTTGTTGCCACTTGCAACTATGGATGGTTCATCCAATGAGCAAAAGCTTCCATGGAAGAA</genome_strand>
        <mrna_strand>GGTTTCCGGTTTGTCATCTGGTTCGGTAGAATGCCTTTCTCCTAATATGATCCAGAGTTTGCTCGGAGAAAACTTTGCTGCTGACCTTCTCTAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCACTTCAAGAGCTAGATAATGAAATGTCAAGAGAACTGATGGGTTTGCTTAAAAGACAGAGGGAGAGTGACAGATCATATTATCAGTTATGCCATCTTGTGAGGCAAGGTGAACAGCCTAGAGAAGGCTTCTTCTTGCTTGCAAATCTGATTGAGGATCCAGTTGGTGGTTCTATTGGTTACCAGGATTGGATTCTGCAAGTACACCGACAAGTCCAGCAAAATGCATAAAG..................................................................................................................................................................................................................................................................GGTTCCTGTATGTTCAATCATTTGTGGTCTTCTACTGTGTGGCGGTTCCTGAAGAAGTTGGAACTTGTTGCCACTTGCAACTATGGATGGTTCATCCAATGAGCAAAAGCTTCCATGGAAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E538329" ref_strand="+" ref_description="SGN-E538329 [TUS-57-H8](-)">
      <seq>ggtttcacttcaagagctagataatgaaatgtcaagagaactgatgggttgcttaaaagacagagggagagtgacagatcatattatcagttatgccatcttgtgaggcaaggtgaacagcctagagaaggcttcttcttgcttgcaaatctgattgaggatccagttggtggttctattggttaccaggattggattctgcaagtacaccgacaagtccagcaaaatgcataaagggttcctgtatgttcaatcatttgtggtcttctactgtgtggcggttcctgaagaagttggaacttgttgccacttgcaactatggatggttcatccaatgagcaaaagcttccatggaagaaatctgctgttagtgttaattgacaccattgattgctgagcttacctgattttccttgtaacattagttgaagaactaatatttctcctcatgttgggatcatttcatacacctggaccagccatgcattatgatgtgggagcaggaagattgtgatcgtccttaaatgctagcattaccccgctgccccatttgcttggggtgaacatgaaaaaaatgctaattgactagtatttattttcacgtgttggtctggttagagtgagatgagacattaaatagaacaatgttgcagttatttatattcttgatgttgtggggatagggtatgcgtttgagtgggatttatttagactttttgtagagatcttgtacatgcatttgctttgcataactgaattttttttgctgcccgtaataaatttttgtgagctaaaaaaaggggggcccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="125311" stop="126966"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125611" g_stop="125847" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="236" r_length="236" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125848" i_stop="126105" i_length="258">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.541" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126106" g_stop="126665" g_length="560"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="795" r_length="559" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E538329" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>797</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E538329" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125611" e_stop="125847"/>
          <exon e_start="126106" e_stop="126665"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTTCACTTCAAGAGCTAGATAATGAAATGTCAAGAGAACTGATGGGTTTGCTTAAAAGACAGAGGGAGAGTGACAGATCATATTATCAGTTATGCCATCTTGTGAGGCAAGGTGAACAGCCTAGAGAAGGCTTCTTCTTGCTTGCAAATCTGATTGAGGATCCAGTTGGTGGTTCTATTGGTTACCAGGATTGGATTCTGCAAGTACACCGACAAGTCCAGCAAAATGCATAAAGGTAATGAAAAGGATTTACTGGTTGTTAATAGTTATAATTCTGTTATGCTTGTATTATTATTGACTTCATCTTTTGGGTGGTACCCAAGTGTTCCAAAAAGAGTGAAGGGTGAATCTTTATTATTGCATTATCTAAATGAAACTGAAACAGATGATGAAGAGATTGCCATCATGGTGATCACCTATGCATTTCTCCTCTCTGAACCTAAAATGATGAGTTTTAGTCTGCTTGCTGATTGAACACTCCCTATTTTAGCAGGGTTCCTGTATGTTCAATCATTTGTGGTCTTCTACTGTGTGGCGGTTCCTGAAGAAGTTGGAACTTGTTGCCACTTGCAACTATGGATGGTTCATCCAATGAGCAAAAGCTTCCATGGAAGAAATCTGCTGTTAGTGTTAATTGACACCATTGATTGCTGAGCTTACCTGATTTTCCTTGTAACATTAGTTGAAGAACTAATATTTCTCCTCATGTTGGGATCATTTCATACACCTGGACCAGCCATGCATTATGATGTGGGAGCAGGAAGATTGTGATCGTCCTTAAATGCTAGCATTACCCCGCTGCCCCATTTGCTTGGGGTGAACATGAAAAAAATGCTAATTGACTAGTATTTATTTTCACGTGTTGGTCTGGTTAGAGTGAGATGAGACATTAAATAGAACAATGTTGCAGTTATTTATATTCTTGATGTTGTGGGGATAGGGTATGCGTTTGAGTGGGATTTATTTAGACTTTTTGTAGAGATCTTGTACATGCATTTGCTTTGCATAACTGAATTTTTTTTGCTGCCCGTAATAAATTTTTGTTGAGCTGAA</genome_strand>
        <mrna_strand>GGTTTCACTTCAAGAGCTAGATAATGAAATGTCAAGAGAACTGATGGG-TTGCTTAAAAGACAGAGGGAGAGTGACAGATCATATTATCAGTTATGCCATCTTGTGAGGCAAGGTGAACAGCCTAGAGAAGGCTTCTTCTTGCTTGCAAATCTGATTGAGGATCCAGTTGGTGGTTCTATTGGTTACCAGGATTGGATTCTGCAAGTACACCGACAAGTCCAGCAAAATGCATAAAG..................................................................................................................................................................................................................................................................GGTTCCTGTATGTTCAATCATTTGTGGTCTTCTACTGTGTGGCGGTTCCTGAAGAAGTTGGAACTTGTTGCCACTTGCAACTATGGATGGTTCATCCAATGAGCAAAAGCTTCCATGGAAGAAATCTGCTGTTAGTGTTAATTGACACCATTGATTGCTGAGCTTACCTGATTTTCCTTGTAACATTAGTTGAAGAACTAATATTTCTCCTCATGTTGGGATCATTTCATACACCTGGACCAGCCATGCATTATGATGTGGGAGCAGGAAGATTGTGATCGTCCTTAAATGCTAGCATTACCCCGCTGCCCCATTTGCTTGGGGTGAACATGAAAAAAATGCTAATTGACTAGTATTTATTTTCACGTGTTGGTCTGGTTAGAGTGAGATGAGACATTAAATAGAACAATGTTGCAGTTATTTATATTCTTGATGTTGTGGGGATAGGGTATGCGTTTGAGTGGGATTTATTTAGACTTTTTGTAGAGATCTTGTACATGCATTTGCTTTGCATAACTGAATTTTTTTTGCTGCCCGTAATAAATTTTTG-TGAGCTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E547987" ref_strand="+" ref_description="SGN-E547987 [TUS-56-O19](-)">
      <seq>agctagataatgaaatgtcaagagaactgatgggttgcttaaaagacagagggagagtgacagatcatattatcagttatgccatcttgtgaggcaaggtgaacagcctagagaaggcttcttcttgcttgcaaatctgattgaggatccagttggtggttctattggttaccaggattggattctgcaagtacaccgacaagtccagcaaaatgcataaagcagggttcctgtatgttcaatcatttgtggtcttctactgtgtggcggttcctgaagaagttggaacttgttgccacttgcaactatggatggttcatccaatgagcaaaagcttccatggaagaaatctgctgttagtgttaattgacaccattgattgctgagcttacctgattttccttgtaacattagttgaagaactaatatttctcctcatgttgggatcatttcatacacctggaccagccatgcattatgatgtgggagcaggaagattgtgatcgtccttaaatgctagcattaccccgctgccccatttgcttggggtgaacatgaaaaaaatgctaattgactagtatttattttcacgtgttggtctggttagagtgagatgagacattaaatagaacaatgttgcagttatttatattcttgatgttgtggggatagggtatgcgtttgagtgggatttatttagactttttgtagagatcttgtacatgcatttgctttgcataactgaattttttttgctgcccgtaataaatttttgttgagctgaaaaaaaaaaaaaaaaaaaaaaaagaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="125325" stop="126966"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125625" g_stop="125847" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="222" r_length="222" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125848" i_stop="126102" i_length="255">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126103" g_stop="126665" g_length="563"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="785" r_length="563" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="786" polyA_stop="811"/>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E547987" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>786</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E547987" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125625" e_stop="125847"/>
          <exon e_start="126103" e_stop="126665"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTAGATAATGAAATGTCAAGAGAACTGATGGGTTTGCTTAAAAGACAGAGGGAGAGTGACAGATCATATTATCAGTTATGCCATCTTGTGAGGCAAGGTGAACAGCCTAGAGAAGGCTTCTTCTTGCTTGCAAATCTGATTGAGGATCCAGTTGGTGGTTCTATTGGTTACCAGGATTGGATTCTGCAAGTACACCGACAAGTCCAGCAAAATGCATAAAGGTAATGAAAAGGATTTACTGGTTGTTAATAGTTATAATTCTGTTATGCTTGTATTATTATTGACTTCATCTTTTGGGTGGTACCCAAGTGTTCCAAAAAGAGTGAAGGGTGAATCTTTATTATTGCATTATCTAAATGAAACTGAAACAGATGATGAAGAGATTGCCATCATGGTGATCACCTATGCATTTCTCCTCTCTGAACCTAAAATGATGAGTTTTAGTCTGCTTGCTGATTGAACACTCCCTATTTTAGCAGGGTTCCTGTATGTTCAATCATTTGTGGTCTTCTACTGTGTGGCGGTTCCTGAAGAAGTTGGAACTTGTTGCCACTTGCAACTATGGATGGTTCATCCAATGAGCAAAAGCTTCCATGGAAGAAATCTGCTGTTAGTGTTAATTGACACCATTGATTGCTGAGCTTACCTGATTTTCCTTGTAACATTAGTTGAAGAACTAATATTTCTCCTCATGTTGGGATCATTTCATACACCTGGACCAGCCATGCATTATGATGTGGGAGCAGGAAGATTGTGATCGTCCTTAAATGCTAGCATTACCCCGCTGCCCCATTTGCTTGGGGTGAACATGAAAAAAATGCTAATTGACTAGTATTTATTTTCACGTGTTGGTCTGGTTAGAGTGAGATGAGACATTAAATAGAACAATGTTGCAGTTATTTATATTCTTGATGTTGTGGGGATAGGGTATGCGTTTGAGTGGGATTTATTTAGACTTTTTGTAGAGATCTTGTACATGCATTTGCTTTGCATAACTGAATTTTTTTTGCTGCCCGTAATAAATTTTTGTTGAGCTGAA</genome_strand>
        <mrna_strand>AGCTAGATAATGAAATGTCAAGAGAACTGATGGG-TTGCTTAAAAGACAGAGGGAGAGTGACAGATCATATTATCAGTTATGCCATCTTGTGAGGCAAGGTGAACAGCCTAGAGAAGGCTTCTTCTTGCTTGCAAATCTGATTGAGGATCCAGTTGGTGGTTCTATTGGTTACCAGGATTGGATTCTGCAAGTACACCGACAAGTCCAGCAAAATGCATAAAG...............................................................................................................................................................................................................................................................CAGGGTTCCTGTATGTTCAATCATTTGTGGTCTTCTACTGTGTGGCGGTTCCTGAAGAAGTTGGAACTTGTTGCCACTTGCAACTATGGATGGTTCATCCAATGAGCAAAAGCTTCCATGGAAGAAATCTGCTGTTAGTGTTAATTGACACCATTGATTGCTGAGCTTACCTGATTTTCCTTGTAACATTAGTTGAAGAACTAATATTTCTCCTCATGTTGGGATCATTTCATACACCTGGACCAGCCATGCATTATGATGTGGGAGCAGGAAGATTGTGATCGTCCTTAAATGCTAGCATTACCCCGCTGCCCCATTTGCTTGGGGTGAACATGAAAAAAATGCTAATTGACTAGTATTTATTTTCACGTGTTGGTCTGGTTAGAGTGAGATGAGACATTAAATAGAACAATGTTGCAGTTATTTATATTCTTGATGTTGTGGGGATAGGGTATGCGTTTGAGTGGGATTTATTTAGACTTTTTGTAGAGATCTTGTACATGCATTTGCTTTGCATAACTGAATTTTTTTTGCTGCCCGTAATAAATTTTTGTTGAGCTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E545874" ref_strand="+" ref_description="SGN-E545874 [TUS-68-P5](-)">
      <seq>tgatgggtttgcttaaaagacagagggagagtgatagatcatattatcagttatgccatcttgtgaggcaaggtgaacagcctagagaaggcttcttcttgcttgcaaatctgattgaggatccagttggtggttctattggttaccaggattggattctgcaagtacaccgacaagtccagcaaaatgcataaagggttcctgtatgttcaatcatttgtggtcttctactgagtggcgattccagaagaagttgggacttgttgccacttgcaactatggatggttcatccaatgagcaaaagcttccatggaagaaatctgctgttagtgttaattgacatcattgattgctgagcttacctgattttccttgtaacattagttgaagaactaatatttctcctcatgttgggatcatttcatacacctggaccagccatgcattatgatgtgggagcaggaagattgtgatcgtccttaaatgctagcattgccccgctgccccatttgcttggggtgaacatgaaagaaatgctaattgactagtatttattttcacgtgttggtctggttagagtgagatgagacattaaatagaacaatgttgcagttatttatattcttgatgttatggggataggatatgcgtttgagtgggatttatttagactttttgtagagatcttgtacatgcatttgcttttcataactgaattttttttgctgcccgtaataaatttttgttgagctgaacaaaaaaaaaaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="125352" stop="126965"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125652" g_stop="125847" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="196" r_length="196" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125848" i_stop="126105" i_length="258">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.541" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126106" g_stop="126665" g_length="560"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="756" r_length="560" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="758" polyA_stop="771"/>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E545874" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>756</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E545874" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125652" e_stop="125847"/>
          <exon e_start="126106" e_stop="126665"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATGGGTTTGCTTAAAAGACAGAGGGAGAGTGACAGATCATATTATCAGTTATGCCATCTTGTGAGGCAAGGTGAACAGCCTAGAGAAGGCTTCTTCTTGCTTGCAAATCTGATTGAGGATCCAGTTGGTGGTTCTATTGGTTACCAGGATTGGATTCTGCAAGTACACCGACAAGTCCAGCAAAATGCATAAAGGTAATGAAAAGGATTTACTGGTTGTTAATAGTTATAATTCTGTTATGCTTGTATTATTATTGACTTCATCTTTTGGGTGGTACCCAAGTGTTCCAAAAAGAGTGAAGGGTGAATCTTTATTATTGCATTATCTAAATGAAACTGAAACAGATGATGAAGAGATTGCCATCATGGTGATCACCTATGCATTTCTCCTCTCTGAACCTAAAATGATGAGTTTTAGTCTGCTTGCTGATTGAACACTCCCTATTTTAGCAGGGTTCCTGTATGTTCAATCATTTGTGGTCTTCTACTGTGTGGCGGTTCCTGAAGAAGTTGGAACTTGTTGCCACTTGCAACTATGGATGGTTCATCCAATGAGCAAAAGCTTCCATGGAAGAAATCTGCTGTTAGTGTTAATTGACACCATTGATTGCTGAGCTTACCTGATTTTCCTTGTAACATTAGTTGAAGAACTAATATTTCTCCTCATGTTGGGATCATTTCATACACCTGGACCAGCCATGCATTATGATGTGGGAGCAGGAAGATTGTGATCGTCCTTAAATGCTAGCATTACCCCGCTGCCCCATTTGCTTGGGGTGAACATGAAAAAAATGCTAATTGACTAGTATTTATTTTCACGTGTTGGTCTGGTTAGAGTGAGATGAGACATTAAATAGAACAATGTTGCAGTTATTTATATTCTTGATGTTGTGGGGATAGGGTATGCGTTTGAGTGGGATTTATTTAGACTTTTTGTAGAGATCTTGTACATGCATTTGCTTTGCATAACTGAATTTTTTTTGCTGCCCGTAATAAATTTTTGTTGAGCTGAA</genome_strand>
        <mrna_strand>TGATGGGTTTGCTTAAAAGACAGAGGGAGAGTGATAGATCATATTATCAGTTATGCCATCTTGTGAGGCAAGGTGAACAGCCTAGAGAAGGCTTCTTCTTGCTTGCAAATCTGATTGAGGATCCAGTTGGTGGTTCTATTGGTTACCAGGATTGGATTCTGCAAGTACACCGACAAGTCCAGCAAAATGCATAAAG..................................................................................................................................................................................................................................................................GGTTCCTGTATGTTCAATCATTTGTGGTCTTCTACTGAGTGGCGATTCCAGAAGAAGTTGGGACTTGTTGCCACTTGCAACTATGGATGGTTCATCCAATGAGCAAAAGCTTCCATGGAAGAAATCTGCTGTTAGTGTTAATTGACATCATTGATTGCTGAGCTTACCTGATTTTCCTTGTAACATTAGTTGAAGAACTAATATTTCTCCTCATGTTGGGATCATTTCATACACCTGGACCAGCCATGCATTATGATGTGGGAGCAGGAAGATTGTGATCGTCCTTAAATGCTAGCATTGCCCCGCTGCCCCATTTGCTTGGGGTGAACATGAAAGAAATGCTAATTGACTAGTATTTATTTTCACGTGTTGGTCTGGTTAGAGTGAGATGAGACATTAAATAGAACAATGTTGCAGTTATTTATATTCTTGATGTTATGGGGATAGGATATGCGTTTGAGTGGGATTTATTTAGACTTTTTGTAGAGATCTTGTACATGCATTTGCTTTTCATAACTGAATTTTTTTTGCTGCCCGTAATAAATTTTTGTTGAGCTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E538336" ref_strand="+" ref_description="SGN-E538336 [TUS-57-H12](-)">
      <seq>aggatccagttggtggttctattggttcccaggattggattctgcaagtacaccgacaagtccagcaaaaatgcataaagggttcctgtatgttcaatcatttgtggtcttctactgtgtggcggttcctgaagaagttggaacttgttgccacttgcaactatggatggttcatccaatgagcaaaagcttccatggaagaaatctgctgttagtgttaattgacaccattgattgctgagcttacatgattttccttgtaacattagttgaagaactaatatttctcctcatgttgggatcatttcatacacctggaccagccatgcattatgatgtgggagcaggaagattgtgatcgtccttaaatgctagcattaccccgctgccccatttgcttggggtgaacatgaaaaaaatgctaattgactagtatttattttcacgtgttggtctggttagagtgagatgagacattaaatagaacaatgttgcagttatttatattcttgatgttgtggggatagggtatgcgtttgagtgggatttatttagactttttgtagagatcttgtacatgcatttgctttgcataactgaattttttttgctgccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="125469" stop="126941"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125769" g_stop="125847" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="80" r_length="80" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125848" i_stop="126105" i_length="258">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.541" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126106" g_stop="126641" g_length="536"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="616" r_length="536" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E538336" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E538336" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125769" e_stop="125847"/>
          <exon e_start="126106" e_stop="126641"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGATCCAGTTGGTGGTTCTATTGGTTACCAGGATTGGATTCTGCAAGTACACCGACAAGTCCAGC-AAAATGCATAAAGGTAATGAAAAGGATTTACTGGTTGTTAATAGTTATAATTCTGTTATGCTTGTATTATTATTGACTTCATCTTTTGGGTGGTACCCAAGTGTTCCAAAAAGAGTGAAGGGTGAATCTTTATTATTGCATTATCTAAATGAAACTGAAACAGATGATGAAGAGATTGCCATCATGGTGATCACCTATGCATTTCTCCTCTCTGAACCTAAAATGATGAGTTTTAGTCTGCTTGCTGATTGAACACTCCCTATTTTAGCAGGGTTCCTGTATGTTCAATCATTTGTGGTCTTCTACTGTGTGGCGGTTCCTGAAGAAGTTGGAACTTGTTGCCACTTGCAACTATGGATGGTTCATCCAATGAGCAAAAGCTTCCATGGAAGAAATCTGCTGTTAGTGTTAATTGACACCATTGATTGCTGAGCTTACCTGATTTTCCTTGTAACATTAGTTGAAGAACTAATATTTCTCCTCATGTTGGGATCATTTCATACACCTGGACCAGCCATGCATTATGATGTGGGAGCAGGAAGATTGTGATCGTCCTTAAATGCTAGCATTACCCCGCTGCCCCATTTGCTTGGGGTGAACATGAAAAAAATGCTAATTGACTAGTATTTATTTTCACGTGTTGGTCTGGTTAGAGTGAGATGAGACATTAAATAGAACAATGTTGCAGTTATTTATATTCTTGATGTTGTGGGGATAGGGTATGCGTTTGAGTGGGATTTATTTAGACTTTTTGTAGAGATCTTGTACATGCATTTGCTTTGCATAACTGAATTTTTTTTGCTGCCC</genome_strand>
        <mrna_strand>AGGATCCAGTTGGTGGTTCTATTGGTTCCCAGGATTGGATTCTGCAAGTACACCGACAAGTCCAGCAAAAATGCATAAAG..................................................................................................................................................................................................................................................................GGTTCCTGTATGTTCAATCATTTGTGGTCTTCTACTGTGTGGCGGTTCCTGAAGAAGTTGGAACTTGTTGCCACTTGCAACTATGGATGGTTCATCCAATGAGCAAAAGCTTCCATGGAAGAAATCTGCTGTTAGTGTTAATTGACACCATTGATTGCTGAGCTTACATGATTTTCCTTGTAACATTAGTTGAAGAACTAATATTTCTCCTCATGTTGGGATCATTTCATACACCTGGACCAGCCATGCATTATGATGTGGGAGCAGGAAGATTGTGATCGTCCTTAAATGCTAGCATTACCCCGCTGCCCCATTTGCTTGGGGTGAACATGAAAAAAATGCTAATTGACTAGTATTTATTTTCACGTGTTGGTCTGGTTAGAGTGAGATGAGACATTAAATAGAACAATGTTGCAGTTATTTATATTCTTGATGTTGTGGGGATAGGGTATGCGTTTGAGTGGGATTTATTTAGACTTTTTGTAGAGATCTTGTACATGCATTTGCTTTGCATAACTGAATTTTTTTTGCTGCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E286577" ref_strand="+" ref_description="SGN-E286577 [cLES-12-I23]">
      <seq>cggttcctgaagaagttggaacttgttgccacttgcaactatggatggttcatccaatgagcaaaagcttccatggaagaaatctgctgttagtgttaattgacaccattgattgctgagcttacctgattttccttgtaacattagttgaagaactaatatttctcctcatgttgggatcatttcatacacctggaccagccatgcattatgatgtgggagcaggaagattgtgatcgtccttaaatgctagcattaccccgctgccccatttgcttggggtgaacatgaaaaaaatgctaattgactagtatttattttcacgtgttggtctggttagagtgagatgagacattaaatagaacaatgttgcagttatttatattcttgatgttgtggggatagggtatgcgtttgagtgggatttatttagactttttgtagagatcttgtacatgcatttgctatgcataactgaattttttttgctgcccgtaataaatttttgttgagctgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="+" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="125848" stop="126966"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126148" g_stop="126673" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="+" ref_id="SGN-E286577" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E286577" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126148" e_stop="126673"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGTTCCTGAAGAAGTTGGAACTTGTTGCCACTTGCAACTATGGATGGTTCATCCAATGAGCAAAAGCTTCCATGGAAGAAATCTGCTGTTAGTGTTAATTGACACCATTGATTGCTGAGCTTACCTGATTTTCCTTGTAACATTAGTTGAAGAACTAATATTTCTCCTCATGTTGGGATCATTTCATACACCTGGACCAGCCATGCATTATGATGTGGGAGCAGGAAGATTGTGATCGTCCTTAAATGCTAGCATTACCCCGCTGCCCCATTTGCTTGGGGTGAACATGAAAAAAATGCTAATTGACTAGTATTTATTTTCACGTGTTGGTCTGGTTAGAGTGAGATGAGACATTAAATAGAACAATGTTGCAGTTATTTATATTCTTGATGTTGTGGGGATAGGGTATGCGTTTGAGTGGGATTTATTTAGACTTTTTGTAGAGATCTTGTACATGCATTTGCTTTGCATAACTGAATTTTTTTTGCTGCCCGTAATAAATTTTTGTTGAGCTGAAATGTAGTG</genome_strand>
        <mrna_strand>CGGTTCCTGAAGAAGTTGGAACTTGTTGCCACTTGCAACTATGGATGGTTCATCCAATGAGCAAAAGCTTCCATGGAAGAAATCTGCTGTTAGTGTTAATTGACACCATTGATTGCTGAGCTTACCTGATTTTCCTTGTAACATTAGTTGAAGAACTAATATTTCTCCTCATGTTGGGATCATTTCATACACCTGGACCAGCCATGCATTATGATGTGGGAGCAGGAAGATTGTGATCGTCCTTAAATGCTAGCATTACCCCGCTGCCCCATTTGCTTGGGGTGAACATGAAAAAAATGCTAATTGACTAGTATTTATTTTCACGTGTTGGTCTGGTTAGAGTGAGATGAGACATTAAATAGAACAATGTTGCAGTTATTTATATTCTTGATGTTGTGGGGATAGGGTATGCGTTTGAGTGGGATTTATTTAGACTTTTTGTAGAGATCTTGTACATGCATTTGCTATGCATAACTGAATTTTTTTTGCTGCCCGTAATAAATTTTTGTTGAGCTGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E696662" ref_strand="+" ref_description="SGN-E696662 [LH_Ea09L12](-)">
      <seq>aaaagctaggagatctgtccttgatcctccttgggaaggtacgaatctgataccgggtgatgtcttgtggtcagacccgtcaatgaaacctggactttccccaaataaagaaagaggaattggtctcttatggggtccggattgcaccgaagatttcttgaagatgttgaatttaaagttgattattaggtcacatgaaggtccagatgcaagggaaaagagagagggaatggaaggaatggatcaagggtacaccatagaccatgaggtccagtccggtaaattgattacagtgtttagtgccccagactatccacagtttcaggcaactaaggataggtaccgaaataaaggagcatatattattttggaacctcctaattttgacatccccgtttatcgtagttttgaagcagtgatgccccgacccaaggtgaatccatattatgattttgaagattgcattgattctgatgaagaattagacttggcgtctatggctacatgaaggtagttctcatgatcagcgcgacatttgcaaagcttaaaatattgtacatgctgctatattatttttgaggtgatattagtaaaattattccttcaagatttcttgactgttagagagatacgtatcatggttttctactcagaacagttgccgatgtacaacctttttttgtatcaaatttagacagattgtttcttgtacaaatgaatatctttaatgctgcttgttttgcaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="132281" stop="127463"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131981" g_stop="131804" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="131803" i_stop="129713" i_length="2091">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129712" g_stop="129566" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="325" r_length="147" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129565" i_stop="128329" i_length="1237">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="128328" g_stop="128221" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="433" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="128220" i_stop="128076" i_length="145">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128075" g_stop="127773" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="736" r_length="303" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="744" polyA_stop="762"/>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E696662" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>736</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E696662" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131981" e_stop="131804"/>
          <exon e_start="129712" e_stop="129566"/>
          <exon e_start="128328" e_stop="128221"/>
          <exon e_start="128075" e_stop="127773"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGCTAGGAGATCTGTCCTTGATCCTCCTTGGGAAGGTACGAATCTGATACCGGGTGATGTCTTGTGGTCAGACCCGTCAATGAAACCTGGACTTTCCCCAAATAAAGAAAGAGGAATTGGTCTCTTATGGGGTCCGGATTGCACCGAAGATTTCTTGAAGATGTTGAATTTAAAGGTAAACTACTTGGAATTGTATTTCTTTCTTTGTATATGCTCTTTTCTTCTTGTTATTGATATAGCCTACTGCTAAATTACTTTGAAGTTGTCTTTTAACAGAGCTTAAAGTACATTTTTTTATCATTTATTTTTGAATGAAATTCTACAATATATTATGTCTTGTTCGCACGGTTTTATGGTGCGAATGATGTGATTGGACGTAATATTATTCAGAATATAATCTTTGACTTTGTAGTTTTTGTATTAAACTTCAATAGCTTCCATTAAGTGGGTTGTACTGTTTGTCAAAATATAATCTTTGAATTTGTAGTTCTTGGATTCGATTTCAATAGCTCTATTTTAAACTATGTTTGATTGAGGTGTAAGAAGAGGGGTTTGAGGAAGAATAAGGGTTGTTACTCTCGTCTATACAAGGAAGTTAAAGAAGAGGTGGAGTGTCCCCCCCCTCAATTTTACTCATTTTCCAACTTTACCAACCCTATTAGTCAACTAGGTGCAAACTAATTAATATCTGACCCAAGGCAAACCAACTACTTTATCTTCCTTCACTCTCTCTCATTTTTTCGGGAACCAATTGTTAACCAACCTTTGTGCTAGAACCATAGTTCCTGCAGTTTGAGTCATATATCCATATAAGCAATTAAGATAGGATGGGACTCACAAGTTGAAGTTACTCATATTTCTCTCTCTTTTTTGTACAAATTTTCACTAGGATATACTTTTATTTTTATGTATTTTACCGTAGTCATAACAATTCAGTTATACCTTTGCTGTAACTTGTAATATTTTGGAGATAAAGTAAGAAAATTCCTTAAGAAAAGGGCAAACCCCTTATACATGAAATGCCAAAAAGCAGAGAACCTTGCAAAAATACATGGTTTTCCATTAATGACATCACTTGATATTTAAATCCATCAATATTCTTGTCACATGACAGTTCAAATATTGGGTTGTTGCCTTATCTGTATACTCATGGAGTTCTGTGTTCACCTCATCAACATTTCCTCCTTGAGGATGAACATTGAAACTATTCTATCAGGCAAGGCTGCTAGGGAAATGATCCAATCTTCTTTCAGATGAAACTAATTAATTATCTGCATAATTTGAGTCCACTAGAAGATAAACATAACTAATCAAAGCAACTTCAAAGATCGAATAAGATTTATTACACGTGTGACGTGTTTGACTTACCTATGCAGAGATAATGGACAAGGCTGTACTATTTTTTAAAATATGGTGCACTCCTATTTAGTGGACTGAAAGGCTCTCATTGCACTTTCCTTTCGTCTGGTTCCATCATTGACTTGGTTCATCAATTTGATTTAGTAGTCAATAAGATGGACATACAAAGAGTTGATGCACCTCTTTTCAATGTCAATAAACAAGTCTTTTCATTTGTGAAAAAAAGGGTCTTTTCATATTTATTCACCTGAAGGAGGCTGGTTGTAACATGTTTTTCTTGAGTAGAGCATTGGTTTTATATCCAGTTGCAATGCAATACTAGTAATATTAACCAATTTCAAACGCATGAGTGTAGACATAACTATACTGGGTGTCTAAGAAAATCATGCTACTACCTGTACTCATTTAAGTAAGAAAATGATCTGGTTGTTGCCTTAAAAACTAGTACGCTATGATAGTAGTGCCATTAATATCTGAAATTCTTTCCTTTTTCTGACATAGCGGATCCAGTGTAGCTGGGAAATCAGAATATTTCCTAGAGATTACCGATGAACCTTTGGAGATGAATTTACTTGTTTTGAAGCCCAATCATTTCATTGGAAAAAGGAAAGAAAAATGTTGTATGAGATCTTAATTCCAAGTATCTGTGAACGAAGCATTTAACCACTTAAAGACCCACAAAGAAGTGAAGAAGCACAAAGGATGAAGATACTTTTACGTGACGAAGGCCTCTCACGTAATATTTGCCTGTTCAGGACTACTCTTATTTTGCACCTATACTATTTATGTTTACATTATTCATGTAATTTTAGGTTCTTGTATTTTCTGTGAGCTTGACATCTTCTTTTGTGACTTCTATATGTGAGAAAATTGCTCACGTTATGGTCTTTGATTGCTGCAACCTCAGTTGATTATTAGGTCACATGAAGGTCCAGATGCAAGGGAAAAGAGAGAGGGAATGGAAGGAATGGATCAAGGGTACACCATAGATCATGAGGTCCAGTCCGGTAAATTGATTACAGTGTTTAGTGCCCCAGACTATCCACAGTTTCAGGTATCTTCAATTTTACCATTCACTATATCATACTTTTTCACCTTACATCGTCCATGGTCAGAGTTTGTAGTTTGTGTTATACTTGAGTATGCAGTTCAACTTTCCTTTATGAAAACCGCTGGTGTGTTTACTTTCAGATGTCTGTAGAAGTGTAGTGCGTCTTTAAAGTTGCACAATGTTACTTTTGATAGAAACTATGTAATGCATCTGTTGATTCAGAATTTCTTTTCCTGAAATATGTGCCCAATGAGCATACTAATGGGATATATATATATATATATATATGTATATTTTGAAACAACGTATTAATGGTATATTAGGAGCATTTATCTTCTATTGTAGTGGCCTGTGTGCTTTCAATGATTGCATCAGCCAGATGTAGAGAAATGAGTTTAGGAATTTTTGTATTTTGGCAACCAATACTTACAAAGATGCATAAAGAACTTCACTCTTCAGTAGTTCTATCTTTCATGGTATATTAGGTGAAAAAGTATCTTTCATGGTCGGAGTGGTCTACTTTTTTTGTTTGTTTTGCATGTTGCCTAATCAGCATTTTCTCACGCTTAGCCAACATTCATTTACTCTAGGTTGAAATTGGTTAATTGACCGGATCGTTGCAAGGTAAAAATCTTGCATGACTTGATCGTCAACTGTCACTTTCTCCCTATTTCGGGAAGTAGTTTGTGGGCTTCATTCGTCAATATAAACAAATTTTCCGGTAACACACCTGCTGAGCTTGCTGGAATTGGCCCTTGCGCAAATTTTGGTGTTTACACAGCCAATTGTCTGTTTGTCCCTTCAAGTGGTATTAAGAATATGCTGCAATTATTACTATTTGCCTAAGGTTCTACTAAATAGATTCAATTTATGCGTGAAGTTTCTTTCTGGAGCAGTTTTTCCGGCTTGGGAATTAAGCCAATTTCTAGTCATGTGTTATACTCTACTTAAATGAATCAATGGAGGCCTGAAACTGCACTAGTTAGGATTGTCAAACCATTTTGAATCTACTTAATGAATCAATTTGTTCTATTGCTTCGAGAGGGTTTTCCTAATGATGGATCCTTTTCAATATGGTAAGAATAGGTAGCCATCTCGTCAAAATTAGGTTTTATCATGTTTGTTCAATTTTTTATACACTCATGCAAAAAGTTTGAAACATCTTTAGCGCCATTTCTATACCTGGAAGCTGTAGTATGAAATGGAGAAACTTATCTTTCTGTTTGTGCCCTAACTGCAGGCAACTAAGGATAGGTACCGAAATAAAGGAGCATATATTATTTTGGAACCTCCTAATTTTGACATCCCCGTTTATCGTAGTTTTGAAGCAGTGATGCCCCGACCCAAGGTATAGAACAGTTTGAAGCTTTGTCTTATCTTGAATTGAAATTCATGGGGTGTTCTTTTGTAAACAATGAGTAATTTGTTTGAAATTACTTGCATTGTCATGGCTGTTTAATGTAATAATAACATTGACTAAGTTATTGTCACAGGTGAATCCATATTATGATTTTGAAGATTGCATTGATTCTGATGAAGAATTAGACTTGGCGTCTATGGCTACATGAAGGTAGTTCTCATGATCAGCGCGACATTTGCAAAGCTTAAAATATTGTACATGCTTCTATATTATTTTTGAGGTGATATTAGTAAAATTATTCCTTCAAGATTTCTTGACTGTTAGAGAGATACGTATCATGGTTTTCTACTCAGAACAGTTGCTGATGTACAACCTTTTTTTGTATCAAATTTAGACAGACTGTTTCTTGTACAACTTAATATCTTAAATGCTGCTT</genome_strand>
        <mrna_strand>AAAAGCTAGGAGATCTGTCCTTGATCCTCCTTGGGAAGGTACGAATCTGATACCGGGTGATGTCTTGTGGTCAGACCCGTCAATGAAACCTGGACTTTCCCCAAATAAAGAAAGAGGAATTGGTCTCTTATGGGGTCCGGATTGCACCGAAGATTTCTTGAAGATGTTGAATTTAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTATTAGGTCACATGAAGGTCCAGATGCAAGGGAAAAGAGAGAGGGAATGGAAGGAATGGATCAAGGGTACACCATAGACCATGAGGTCCAGTCCGGTAAATTGATTACAGTGTTTAGTGCCCCAGACTATCCACAGTTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACTAAGGATAGGTACCGAAATAAAGGAGCATATATTATTTTGGAACCTCCTAATTTTGACATCCCCGTTTATCGTAGTTTTGAAGCAGTGATGCCCCGACCCAAG.................................................................................................................................................GTGAATCCATATTATGATTTTGAAGATTGCATTGATTCTGATGAAGAATTAGACTTGGCGTCTATGGCTACATGAAGGTAGTTCTCATGATCAGCGCGACATTTGCAAAGCTTAAAATATTGTACATGCTGCTATATTATTTTTGAGGTGATATTAGTAAAATTATTCCTTCAAGATTTCTTGACTGTTAGAGAGATACGTATCATGGTTTTCTACTCAGAACAGTTGCCGATGTACAACCTTTTTTTGTATCAAATTTAGACAGATTGTTTCTTGTACAAATGAATATCTTTAATGCTGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E396602" ref_strand="+" ref_description="SGN-E396602 [TUS-43-B19](-)">
      <seq>atttaaaagttgattattaggtcacatgaaggtccagatgcaagggaaaagagagagggaatggaaggaatggatcaagggtacaccatagatcatgaggtccagtccggtaaattgattacagtgtttagtgccccagactatccacagtttcaggttgaaattggttaattgaccggatcgttgcaaggtaaaaatcttgcatgacttgatcgtcaactgtcactttctccctatttcgggaagtagtttgtgggcttcattcgtcaatataaacaaattttccggtaacacacctgctgagcttgctggaattggcccttgcgcaaattttggtgtttacacagccaattgtctgtttgtcccttcaagtggcaactaaggataggtaccgaaataaaggagcatatattattttggaacctcctaattttgacatccccgtttatcgtagttttgaagcagtgatgccccgacccaaggtgaatccatattatgattttgaagattgcattgattttgatgaagaattagacttggcgtctatggctacatgaaggtagttctcatgatcagcgcgacatttgcaaagcttaaaatattgtacatgcttctatattatttttgaggtgatattagtaaaattattccttcaagatttcttgactgttagagagatacgtatcatggttttctactcagaacagttgctgatgtacaacctttttttgtatcaaatttagacagaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="130014" stop="127510"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129712" g_stop="129566" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="156" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129565" i_stop="128979" i_length="587">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="128978" g_stop="128761" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="374" r_length="218" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="128760" i_stop="128329" i_length="432">
            <donor d_prob="0.522" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="128328" g_stop="128221" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="482" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="128220" i_stop="128076" i_length="145">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128075" g_stop="127810" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="748" r_length="266" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="749" polyA_stop="762"/>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E396602" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>739</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E396602" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129712" e_stop="129566"/>
          <exon e_start="128978" e_stop="128761"/>
          <exon e_start="128328" e_stop="128221"/>
          <exon e_start="128075" e_stop="127810"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATTATTAGGTCACATGAAGGTCCAGATGCAAGGGAAAAGAGAGAGGGAATGGAAGGAATGGATCAAGGGTACACCATAGATCATGAGGTCCAGTCCGGTAAATTGATTACAGTGTTTAGTGCCCCAGACTATCCACAGTTTCAGGTATCTTCAATTTTACCATTCACTATATCATACTTTTTCACCTTACATCGTCCATGGTCAGAGTTTGTAGTTTGTGTTATACTTGAGTATGCAGTTCAACTTTCCTTTATGAAAACCGCTGGTGTGTTTACTTTCAGATGTCTGTAGAAGTGTAGTGCGTCTTTAAAGTTGCACAATGTTACTTTTGATAGAAACTATGTAATGCATCTGTTGATTCAGAATTTCTTTTCCTGAAATATGTGCCCAATGAGCATACTAATGGGATATATATATATATATATATATGTATATTTTGAAACAACGTATTAATGGTATATTAGGAGCATTTATCTTCTATTGTAGTGGCCTGTGTGCTTTCAATGATTGCATCAGCCAGATGTAGAGAAATGAGTTTAGGAATTTTTGTATTTTGGCAACCAATACTTACAAAGATGCATAAAGAACTTCACTCTTCAGTAGTTCTATCTTTCATGGTATATTAGGTGAAAAAGTATCTTTCATGGTCGGAGTGGTCTACTTTTTTTGTTTGTTTTGCATGTTGCCTAATCAGCATTTTCTCACGCTTAGCCAACATTCATTTACTCTAGGTTGAAATTGGTTAATTGACCGGATCGTTGCAAGGTAAAAATCTTGCATGACTTGATCGTCAACTGTCACTTTCTCCCTATTTCGGGAAGTAGTTTGTGGGCTTCATTCGTCAATATAAACAAATTTTCCGGTAACACACCTGCTGAGCTTGCTGGAATTGGCCCTTGCGCAAATTTTGGTGTTTACACAGCCAATTGTCTGTTTGTCCCTTCAAGTGGTATTAAGAATATGCTGCAATTATTACTATTTGCCTAAGGTTCTACTAAATAGATTCAATTTATGCGTGAAGTTTCTTTCTGGAGCAGTTTTTCCGGCTTGGGAATTAAGCCAATTTCTAGTCATGTGTTATACTCTACTTAAATGAATCAATGGAGGCCTGAAACTGCACTAGTTAGGATTGTCAAACCATTTTGAATCTACTTAATGAATCAATTTGTTCTATTGCTTCGAGAGGGTTTTCCTAATGATGGATCCTTTTCAATATGGTAAGAATAGGTAGCCATCTCGTCAAAATTAGGTTTTATCATGTTTGTTCAATTTTTTATACACTCATGCAAAAAGTTTGAAACATCTTTAGCGCCATTTCTATACCTGGAAGCTGTAGTATGAAATGGAGAAACTTATCTTTCTGTTTGTGCCCTAACTGCAGGCAACTAAGGATAGGTACCGAAATAAAGGAGCATATATTATTTTGGAACCTCCTAATTTTGACATCCCCGTTTATCGTAGTTTTGAAGCAGTGATGCCCCGACCCAAGGTATAGAACAGTTTGAAGCTTTGTCTTATCTTGAATTGAAATTCATGGGGTGTTCTTTTGTAAACAATGAGTAATTTGTTTGAAATTACTTGCATTGTCATGGCTGTTTAATGTAATAATAACATTGACTAAGTTATTGTCACAGGTGAATCCATATTATGATTTTGAAGATTGCATTGATTCTGATGAAGAATTAGACTTGGCGTCTATGGCTACATGAAGGTAGTTCTCATGATCAGCGCGACATTTGCAAAGCTTAAAATATTGTACATGCTTCTATATTATTTTTGAGGTGATATTAGTAAAATTATTCCTTCAAGATTTCTTGACTGTTAGAGAGATACGTATCATGGTTTTCTACTCAGAACAGTTGCTGATGTACAACCTTTTTTTGTATCAAATTTAGACAGA</genome_strand>
        <mrna_strand>TTGATTATTAGGTCACATGAAGGTCCAGATGCAAGGGAAAAGAGAGAGGGAATGGAAGGAATGGATCAAGGGTACACCATAGATCATGAGGTCCAGTCCGGTAAATTGATTACAGTGTTTAGTGCCCCAGACTATCCACAGTTTCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAAATTGGTTAATTGACCGGATCGTTGCAAGGTAAAAATCTTGCATGACTTGATCGTCAACTGTCACTTTCTCCCTATTTCGGGAAGTAGTTTGTGGGCTTCATTCGTCAATATAAACAAATTTTCCGGTAACACACCTGCTGAGCTTGCTGGAATTGGCCCTTGCGCAAATTTTGGTGTTTACACAGCCAATTGTCTGTTTGTCCCTTCAAGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACTAAGGATAGGTACCGAAATAAAGGAGCATATATTATTTTGGAACCTCCTAATTTTGACATCCCCGTTTATCGTAGTTTTGAAGCAGTGATGCCCCGACCCAAG.................................................................................................................................................GTGAATCCATATTATGATTTTGAAGATTGCATTGATTTTGATGAAGAATTAGACTTGGCGTCTATGGCTACATGAAGGTAGTTCTCATGATCAGCGCGACATTTGCAAAGCTTAAAATATTGTACATGCTTCTATATTATTTTTGAGGTGATATTAGTAAAATTATTCCTTCAAGATTTCTTGACTGTTAGAGAGATACGTATCATGGTTTTCTACTCAGAACAGTTGCTGATGTACAACCTTTTTTTGTATCAAATTTAGACAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E701946" ref_strand="+" ref_description="SGN-E701946 [FA17BE09]">
      <seq>catcggtgttgccggtagtggtgtttgatcggcttatactaacggcttccaagatcttgcataaagaacccaattgtgtgcatattgatagcgggtcggggttgggaaatgattcgagggttgttgtggttggggacgtgcacggccagctacatgatgtcttgttcttattgagagatgcgggttttccctctgacgatcggttctttgtgttcaatggagactatgtcgatagaggcgcttggggtcttgagacctttcttaccttgttggcttggaaggtttttatgcccaatagggtgtttctccttcgtggaaatcacgagtcgaagtactgtacttctgtttatggttttgaaaaggaggttctagcgaagtatgcggatagtgggaaacatgtatacaggaaatgtttaggatgcttcgaaggacttcctcttgcatccattattggggatcatgtctacacagctcatggagacccgtcaatgaaacctggactttccccaaataaagaaagaggaattggtctcttatggggtccggattgcaccgaagatttcttgaagatgttgaatttaaagttgattattaggtcacatgaaggtccagatgcaagggaaaagagagagggaatggaaggaatggatcaagggtacaccatagatcatgaggtccagtccggtaaattgattacagtgtttagtgccccagactatccacagtttcaggcaactaaggataggtaccgaaataaaggagcatatattattttggaacctcctaattttgacatccccgtttatcgtagttttgaagcagtgatgccccgacccaaggtgaatccatattatgattttgaagattgcattgattctgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="133611" stop="127734"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="133311" g_stop="133031" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="281" r_length="281" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="133030" i_stop="132299" i_length="732">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132298" g_stop="132100" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="480" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="132099" i_stop="131908" i_length="192">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="131907" g_stop="131804" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="481" r_stop="584" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="131803" i_stop="129713" i_length="2091">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="129712" g_stop="129566" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="585" r_stop="731" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="129565" i_stop="128329" i_length="1237">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="128328" g_stop="128221" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="732" r_stop="839" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="128220" i_stop="128076" i_length="145">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="128075" g_stop="128034" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="840" r_stop="881" r_length="42" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E701946" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>881</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E701946" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="133311" e_stop="133031"/>
          <exon e_start="132298" e_stop="132100"/>
          <exon e_start="131907" e_stop="131804"/>
          <exon e_start="129712" e_stop="129566"/>
          <exon e_start="128328" e_stop="128221"/>
          <exon e_start="128075" e_stop="128034"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCGGTGTTGCCGGTAGTGGTGTTTGATCGGCTTATACTAACGGCTTCCAAGATCTTGCATAAAGAACCCAATTGTGTGCATATTGATAGCGGGTCGGGGTTGGGAAATGATTCGAGGGTTGTTGTGGTTGGGGACGTGCACGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTCAATGGAGACTATGTCGATAGAGGCGCTTGGGGTCTTGAGACCTTTCTTACCTTGTTGGCTTGGAAGGTAAAATCTTTTTAACAAATTTTGAATTCTTTGTTTCCTGTAATGAAAATTTTGAACTGTTTTTATGAAATATTTAGGTAATGTAGTTTGAAATTCCCGTTTGGTAGTGTTTAGTATCAATTATGTTGTTACTTAGTTGATTATCTTACTTTTACTACATATCACAAGTTGTGTCTGGTGATAAGATAACAACTTTACTGTGTTTATGTATGGAATTTATGTCAGCAAATGTAATTGTTGATCATAATTATCAGTTTTATGTGGTCACTTAGCATGGAGAATTAGGGCTTTGTAAAGCTTGACGAGGTATTCTTCCTATAGAGATAGTTTGTTACTTTGTCATTGGCAACGTCATTTAACATCTGGAGGTTGTACAACAACAAAATGGGACGGTGATGCTTAACTTTAAAGTACCAGGTTTTGTATCATGGTAATCTGTAGAACAGGCAAATTCAGTTTTGGTTAAGCTTTATTATCCTTCATCTTCCTTTGAGTTTTGTATCAATTATGATGTTTCCTTGGTAATATTGGTTCATTCCTGTGCCTTGTTTAGCTGGGATAGGATAATATGCATCAAGTAACAGTGAGCTAGAAGCACCTTACTTCAACTTGATATTTGATTTGTGTTGTAACTTTTGAACTCAACTGGTTCATGTAATTGACTTTCTAGCTTATATCAGTCAGATGCAACTGTGGATATTCAATATTCAATCAAACTGTACATTCTTTCAGGTTTTTATGCCCAATAGGGTGTTTCTCCTTCGTGGAAATCACGAGTCGAAGTACTGTACTTCTGTTTATGGTTTTGAAAAGGAGGTTCTAGCGAAGTATGCGGATAGTGGGAAACATGTATACAGGAAATGTTTAGGATGCTTCGAAGGACTTCCTCTTGCATCCATTATTGGGGATCATGTCTACACAGCTCATGGAGGTATTTTCCGCAGTATTGCTGTCACTCCAGCTAAAAGAGCTAAAGGGAAGAAGAACCGTAAAATAGTTTCAAACCCTGATGTTACTACTTTATCTCTTGGTTCTATGGAGGAATTATTAAAAGCTAGGAGATCTGTCCTTGATCCTCCTTGGGAAGGTACGAATCTGATACCGGGTGATGTCTTGTGGTCAGACCCGTCAATGAAACCTGGACTTTCCCCAAATAAAGAAAGAGGAATTGGTCTCTTATGGGGTCCGGATTGCACCGAAGATTTCTTGAAGATGTTGAATTTAAAGGTAAACTACTTGGAATTGTATTTCTTTCTTTGTATATGCTCTTTTCTTCTTGTTATTGATATAGCCTACTGCTAAATTACTTTGAAGTTGTCTTTTAACAGAGCTTAAAGTACATTTTTTTATCATTTATTTTTGAATGAAATTCTACAATATATTATGTCTTGTTCGCACGGTTTTATGGTGCGAATGATGTGATTGGACGTAATATTATTCAGAATATAATCTTTGACTTTGTAGTTTTTGTATTAAACTTCAATAGCTTCCATTAAGTGGGTTGTACTGTTTGTCAAAATATAATCTTTGAATTTGTAGTTCTTGGATTCGATTTCAATAGCTCTATTTTAAACTATGTTTGATTGAGGTGTAAGAAGAGGGGTTTGAGGAAGAATAAGGGTTGTTACTCTCGTCTATACAAGGAAGTTAAAGAAGAGGTGGAGTGTCCCCCCCCTCAATTTTACTCATTTTCCAACTTTACCAACCCTATTAGTCAACTAGGTGCAAACTAATTAATATCTGACCCAAGGCAAACCAACTACTTTATCTTCCTTCACTCTCTCTCATTTTTTCGGGAACCAATTGTTAACCAACCTTTGTGCTAGAACCATAGTTCCTGCAGTTTGAGTCATATATCCATATAAGCAATTAAGATAGGATGGGACTCACAAGTTGAAGTTACTCATATTTCTCTCTCTTTTTTGTACAAATTTTCACTAGGATATACTTTTATTTTTATGTATTTTACCGTAGTCATAACAATTCAGTTATACCTTTGCTGTAACTTGTAATATTTTGGAGATAAAGTAAGAAAATTCCTTAAGAAAAGGGCAAACCCCTTATACATGAAATGCCAAAAAGCAGAGAACCTTGCAAAAATACATGGTTTTCCATTAATGACATCACTTGATATTTAAATCCATCAATATTCTTGTCACATGACAGTTCAAATATTGGGTTGTTGCCTTATCTGTATACTCATGGAGTTCTGTGTTCACCTCATCAACATTTCCTCCTTGAGGATGAACATTGAAACTATTCTATCAGGCAAGGCTGCTAGGGAAATGATCCAATCTTCTTTCAGATGAAACTAATTAATTATCTGCATAATTTGAGTCCACTAGAAGATAAACATAACTAATCAAAGCAACTTCAAAGATCGAATAAGATTTATTACACGTGTGACGTGTTTGACTTACCTATGCAGAGATAATGGACAAGGCTGTACTATTTTTTAAAATATGGTGCACTCCTATTTAGTGGACTGAAAGGCTCTCATTGCACTTTCCTTTCGTCTGGTTCCATCATTGACTTGGTTCATCAATTTGATTTAGTAGTCAATAAGATGGACATACAAAGAGTTGATGCACCTCTTTTCAATGTCAATAAACAAGTCTTTTCATTTGTGAAAAAAAGGGTCTTTTCATATTTATTCACCTGAAGGAGGCTGGTTGTAACATGTTTTTCTTGAGTAGAGCATTGGTTTTATATCCAGTTGCAATGCAATACTAGTAATATTAACCAATTTCAAACGCATGAGTGTAGACATAACTATACTGGGTGTCTAAGAAAATCATGCTACTACCTGTACTCATTTAAGTAAGAAAATGATCTGGTTGTTGCCTTAAAAACTAGTACGCTATGATAGTAGTGCCATTAATATCTGAAATTCTTTCCTTTTTCTGACATAGCGGATCCAGTGTAGCTGGGAAATCAGAATATTTCCTAGAGATTACCGATGAACCTTTGGAGATGAATTTACTTGTTTTGAAGCCCAATCATTTCATTGGAAAAAGGAAAGAAAAATGTTGTATGAGATCTTAATTCCAAGTATCTGTGAACGAAGCATTTAACCACTTAAAGACCCACAAAGAAGTGAAGAAGCACAAAGGATGAAGATACTTTTACGTGACGAAGGCCTCTCACGTAATATTTGCCTGTTCAGGACTACTCTTATTTTGCACCTATACTATTTATGTTTACATTATTCATGTAATTTTAGGTTCTTGTATTTTCTGTGAGCTTGACATCTTCTTTTGTGACTTCTATATGTGAGAAAATTGCTCACGTTATGGTCTTTGATTGCTGCAACCTCAGTTGATTATTAGGTCACATGAAGGTCCAGATGCAAGGGAAAAGAGAGAGGGAATGGAAGGAATGGATCAAGGGTACACCATAGATCATGAGGTCCAGTCCGGTAAATTGATTACAGTGTTTAGTGCCCCAGACTATCCACAGTTTCAGGTATCTTCAATTTTACCATTCACTATATCATACTTTTTCACCTTACATCGTCCATGGTCAGAGTTTGTAGTTTGTGTTATACTTGAGTATGCAGTTCAACTTTCCTTTATGAAAACCGCTGGTGTGTTTACTTTCAGATGTCTGTAGAAGTGTAGTGCGTCTTTAAAGTTGCACAATGTTACTTTTGATAGAAACTATGTAATGCATCTGTTGATTCAGAATTTCTTTTCCTGAAATATGTGCCCAATGAGCATACTAATGGGATATATATATATATATATATATGTATATTTTGAAACAACGTATTAATGGTATATTAGGAGCATTTATCTTCTATTGTAGTGGCCTGTGTGCTTTCAATGATTGCATCAGCCAGATGTAGAGAAATGAGTTTAGGAATTTTTGTATTTTGGCAACCAATACTTACAAAGATGCATAAAGAACTTCACTCTTCAGTAGTTCTATCTTTCATGGTATATTAGGTGAAAAAGTATCTTTCATGGTCGGAGTGGTCTACTTTTTTTGTTTGTTTTGCATGTTGCCTAATCAGCATTTTCTCACGCTTAGCCAACATTCATTTACTCTAGGTTGAAATTGGTTAATTGACCGGATCGTTGCAAGGTAAAAATCTTGCATGACTTGATCGTCAACTGTCACTTTCTCCCTATTTCGGGAAGTAGTTTGTGGGCTTCATTCGTCAATATAAACAAATTTTCCGGTAACACACCTGCTGAGCTTGCTGGAATTGGCCCTTGCGCAAATTTTGGTGTTTACACAGCCAATTGTCTGTTTGTCCCTTCAAGTGGTATTAAGAATATGCTGCAATTATTACTATTTGCCTAAGGTTCTACTAAATAGATTCAATTTATGCGTGAAGTTTCTTTCTGGAGCAGTTTTTCCGGCTTGGGAATTAAGCCAATTTCTAGTCATGTGTTATACTCTACTTAAATGAATCAATGGAGGCCTGAAACTGCACTAGTTAGGATTGTCAAACCATTTTGAATCTACTTAATGAATCAATTTGTTCTATTGCTTCGAGAGGGTTTTCCTAATGATGGATCCTTTTCAATATGGTAAGAATAGGTAGCCATCTCGTCAAAATTAGGTTTTATCATGTTTGTTCAATTTTTTATACACTCATGCAAAAAGTTTGAAACATCTTTAGCGCCATTTCTATACCTGGAAGCTGTAGTATGAAATGGAGAAACTTATCTTTCTGTTTGTGCCCTAACTGCAGGCAACTAAGGATAGGTACCGAAATAAAGGAGCATATATTATTTTGGAACCTCCTAATTTTGACATCCCCGTTTATCGTAGTTTTGAAGCAGTGATGCCCCGACCCAAGGTATAGAACAGTTTGAAGCTTTGTCTTATCTTGAATTGAAATTCATGGGGTGTTCTTTTGTAAACAATGAGTAATTTGTTTGAAATTACTTGCATTGTCATGGCTGTTTAATGTAATAATAACATTGACTAAGTTATTGTCACAGGTGAATCCATATTATGATTTTGAAGATTGCATTGATTCTGAT</genome_strand>
        <mrna_strand>CATCGGTGTTGCCGGTAGTGGTGTTTGATCGGCTTATACTAACGGCTTCCAAGATCTTGCATAAAGAACCCAATTGTGTGCATATTGATAGCGGGTCGGGGTTGGGAAATGATTCGAGGGTTGTTGTGGTTGGGGACGTGCACGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTCAATGGAGACTATGTCGATAGAGGCGCTTGGGGTCTTGAGACCTTTCTTACCTTGTTGGCTTGGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTATGCCCAATAGGGTGTTTCTCCTTCGTGGAAATCACGAGTCGAAGTACTGTACTTCTGTTTATGGTTTTGAAAAGGAGGTTCTAGCGAAGTATGCGGATAGTGGGAAACATGTATACAGGAAATGTTTAGGATGCTTCGAAGGACTTCCTCTTGCATCCATTATTGGGGATCATGTCTACACAGCTCATGGAG................................................................................................................................................................................................ACCCGTCAATGAAACCTGGACTTTCCCCAAATAAAGAAAGAGGAATTGGTCTCTTATGGGGTCCGGATTGCACCGAAGATTTCTTGAAGATGTTGAATTTAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTATTAGGTCACATGAAGGTCCAGATGCAAGGGAAAAGAGAGAGGGAATGGAAGGAATGGATCAAGGGTACACCATAGATCATGAGGTCCAGTCCGGTAAATTGATTACAGTGTTTAGTGCCCCAGACTATCCACAGTTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACTAAGGATAGGTACCGAAATAAAGGAGCATATATTATTTTGGAACCTCCTAATTTTGACATCCCCGTTTATCGTAGTTTTGAAGCAGTGATGCCCCGACCCAAG.................................................................................................................................................GTGAATCCATATTATGATTTTGAAGATTGCATTGATTCTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E701114" ref_strand="+" ref_description="SGN-E701114 [FA15AC08]">
      <seq>catcgttgttgccggtagtggtgtttgatcggcttatactaacggcttccaagatcttgcataaagaacccaattgtgtgcatattgatagcgggtcggggttgggaaatgattcgagggttgttgtggttggggacgtgcacggccagctacatgatgtcttgttcttattgagagatgcgggttttccctctgacgatcggttctttgtgttcaatggagactatgtcgatagaggcgcttggggtcttgagacctttcttaccttgttggcttggaaggtttttatgcccaatagggtgtttctccttcgtggaaatcacgagtcgaagtactgtacttctgtttatggttttgaaaaggaggttctagcgaagtatgcggatagtgggaaacatgtatacaggaaatgtttaggatgcttcgaaggacttcctcttgcatccattattggggatcatgtctacacagctcatggagacccgtcaatgaaacctggactttccccaaataaagaaagaggaattggtctcttatggggtccggattgcaccgaagatttcttgaagatgttgaatttaaagttgattattaggtcacatgaaggtccagatgcaagggaaaagagagagggaatggaaggaatggatcaagggtacaccatagatcatgaggtccagtccggtaaattgattacagtgtttagtgccccagactatccacagtttcaggcaactaaggataggtaccgaaataaaggagcatatattattttggaacctcctaattttgacatcccccgttatcgtagttttgaagcagtgatgccccgacccaaagtgaatccatattatgattttgaagattgcattgattctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="133611" stop="127735"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="133311" g_stop="133031" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="281" r_length="281" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="133030" i_stop="132299" i_length="732">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132298" g_stop="132100" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="480" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="132099" i_stop="131908" i_length="192">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="131907" g_stop="131804" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="481" r_stop="584" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="131803" i_stop="129713" i_length="2091">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="129712" g_stop="129566" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="585" r_stop="731" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="129565" i_stop="128329" i_length="1237">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="128328" g_stop="128221" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="732" r_stop="839" r_length="108" r_score="0.972"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="128220" i_stop="128076" i_length="145">
            <donor d_prob="0.991" d_score="0.94"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="128075" g_stop="128035" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="840" r_stop="880" r_length="41" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E701114" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>880</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E701114" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="133311" e_stop="133031"/>
          <exon e_start="132298" e_stop="132100"/>
          <exon e_start="131907" e_stop="131804"/>
          <exon e_start="129712" e_stop="129566"/>
          <exon e_start="128328" e_stop="128221"/>
          <exon e_start="128075" e_stop="128035"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCGGTGTTGCCGGTAGTGGTGTTTGATCGGCTTATACTAACGGCTTCCAAGATCTTGCATAAAGAACCCAATTGTGTGCATATTGATAGCGGGTCGGGGTTGGGAAATGATTCGAGGGTTGTTGTGGTTGGGGACGTGCACGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTCAATGGAGACTATGTCGATAGAGGCGCTTGGGGTCTTGAGACCTTTCTTACCTTGTTGGCTTGGAAGGTAAAATCTTTTTAACAAATTTTGAATTCTTTGTTTCCTGTAATGAAAATTTTGAACTGTTTTTATGAAATATTTAGGTAATGTAGTTTGAAATTCCCGTTTGGTAGTGTTTAGTATCAATTATGTTGTTACTTAGTTGATTATCTTACTTTTACTACATATCACAAGTTGTGTCTGGTGATAAGATAACAACTTTACTGTGTTTATGTATGGAATTTATGTCAGCAAATGTAATTGTTGATCATAATTATCAGTTTTATGTGGTCACTTAGCATGGAGAATTAGGGCTTTGTAAAGCTTGACGAGGTATTCTTCCTATAGAGATAGTTTGTTACTTTGTCATTGGCAACGTCATTTAACATCTGGAGGTTGTACAACAACAAAATGGGACGGTGATGCTTAACTTTAAAGTACCAGGTTTTGTATCATGGTAATCTGTAGAACAGGCAAATTCAGTTTTGGTTAAGCTTTATTATCCTTCATCTTCCTTTGAGTTTTGTATCAATTATGATGTTTCCTTGGTAATATTGGTTCATTCCTGTGCCTTGTTTAGCTGGGATAGGATAATATGCATCAAGTAACAGTGAGCTAGAAGCACCTTACTTCAACTTGATATTTGATTTGTGTTGTAACTTTTGAACTCAACTGGTTCATGTAATTGACTTTCTAGCTTATATCAGTCAGATGCAACTGTGGATATTCAATATTCAATCAAACTGTACATTCTTTCAGGTTTTTATGCCCAATAGGGTGTTTCTCCTTCGTGGAAATCACGAGTCGAAGTACTGTACTTCTGTTTATGGTTTTGAAAAGGAGGTTCTAGCGAAGTATGCGGATAGTGGGAAACATGTATACAGGAAATGTTTAGGATGCTTCGAAGGACTTCCTCTTGCATCCATTATTGGGGATCATGTCTACACAGCTCATGGAGGTATTTTCCGCAGTATTGCTGTCACTCCAGCTAAAAGAGCTAAAGGGAAGAAGAACCGTAAAATAGTTTCAAACCCTGATGTTACTACTTTATCTCTTGGTTCTATGGAGGAATTATTAAAAGCTAGGAGATCTGTCCTTGATCCTCCTTGGGAAGGTACGAATCTGATACCGGGTGATGTCTTGTGGTCAGACCCGTCAATGAAACCTGGACTTTCCCCAAATAAAGAAAGAGGAATTGGTCTCTTATGGGGTCCGGATTGCACCGAAGATTTCTTGAAGATGTTGAATTTAAAGGTAAACTACTTGGAATTGTATTTCTTTCTTTGTATATGCTCTTTTCTTCTTGTTATTGATATAGCCTACTGCTAAATTACTTTGAAGTTGTCTTTTAACAGAGCTTAAAGTACATTTTTTTATCATTTATTTTTGAATGAAATTCTACAATATATTATGTCTTGTTCGCACGGTTTTATGGTGCGAATGATGTGATTGGACGTAATATTATTCAGAATATAATCTTTGACTTTGTAGTTTTTGTATTAAACTTCAATAGCTTCCATTAAGTGGGTTGTACTGTTTGTCAAAATATAATCTTTGAATTTGTAGTTCTTGGATTCGATTTCAATAGCTCTATTTTAAACTATGTTTGATTGAGGTGTAAGAAGAGGGGTTTGAGGAAGAATAAGGGTTGTTACTCTCGTCTATACAAGGAAGTTAAAGAAGAGGTGGAGTGTCCCCCCCCTCAATTTTACTCATTTTCCAACTTTACCAACCCTATTAGTCAACTAGGTGCAAACTAATTAATATCTGACCCAAGGCAAACCAACTACTTTATCTTCCTTCACTCTCTCTCATTTTTTCGGGAACCAATTGTTAACCAACCTTTGTGCTAGAACCATAGTTCCTGCAGTTTGAGTCATATATCCATATAAGCAATTAAGATAGGATGGGACTCACAAGTTGAAGTTACTCATATTTCTCTCTCTTTTTTGTACAAATTTTCACTAGGATATACTTTTATTTTTATGTATTTTACCGTAGTCATAACAATTCAGTTATACCTTTGCTGTAACTTGTAATATTTTGGAGATAAAGTAAGAAAATTCCTTAAGAAAAGGGCAAACCCCTTATACATGAAATGCCAAAAAGCAGAGAACCTTGCAAAAATACATGGTTTTCCATTAATGACATCACTTGATATTTAAATCCATCAATATTCTTGTCACATGACAGTTCAAATATTGGGTTGTTGCCTTATCTGTATACTCATGGAGTTCTGTGTTCACCTCATCAACATTTCCTCCTTGAGGATGAACATTGAAACTATTCTATCAGGCAAGGCTGCTAGGGAAATGATCCAATCTTCTTTCAGATGAAACTAATTAATTATCTGCATAATTTGAGTCCACTAGAAGATAAACATAACTAATCAAAGCAACTTCAAAGATCGAATAAGATTTATTACACGTGTGACGTGTTTGACTTACCTATGCAGAGATAATGGACAAGGCTGTACTATTTTTTAAAATATGGTGCACTCCTATTTAGTGGACTGAAAGGCTCTCATTGCACTTTCCTTTCGTCTGGTTCCATCATTGACTTGGTTCATCAATTTGATTTAGTAGTCAATAAGATGGACATACAAAGAGTTGATGCACCTCTTTTCAATGTCAATAAACAAGTCTTTTCATTTGTGAAAAAAAGGGTCTTTTCATATTTATTCACCTGAAGGAGGCTGGTTGTAACATGTTTTTCTTGAGTAGAGCATTGGTTTTATATCCAGTTGCAATGCAATACTAGTAATATTAACCAATTTCAAACGCATGAGTGTAGACATAACTATACTGGGTGTCTAAGAAAATCATGCTACTACCTGTACTCATTTAAGTAAGAAAATGATCTGGTTGTTGCCTTAAAAACTAGTACGCTATGATAGTAGTGCCATTAATATCTGAAATTCTTTCCTTTTTCTGACATAGCGGATCCAGTGTAGCTGGGAAATCAGAATATTTCCTAGAGATTACCGATGAACCTTTGGAGATGAATTTACTTGTTTTGAAGCCCAATCATTTCATTGGAAAAAGGAAAGAAAAATGTTGTATGAGATCTTAATTCCAAGTATCTGTGAACGAAGCATTTAACCACTTAAAGACCCACAAAGAAGTGAAGAAGCACAAAGGATGAAGATACTTTTACGTGACGAAGGCCTCTCACGTAATATTTGCCTGTTCAGGACTACTCTTATTTTGCACCTATACTATTTATGTTTACATTATTCATGTAATTTTAGGTTCTTGTATTTTCTGTGAGCTTGACATCTTCTTTTGTGACTTCTATATGTGAGAAAATTGCTCACGTTATGGTCTTTGATTGCTGCAACCTCAGTTGATTATTAGGTCACATGAAGGTCCAGATGCAAGGGAAAAGAGAGAGGGAATGGAAGGAATGGATCAAGGGTACACCATAGATCATGAGGTCCAGTCCGGTAAATTGATTACAGTGTTTAGTGCCCCAGACTATCCACAGTTTCAGGTATCTTCAATTTTACCATTCACTATATCATACTTTTTCACCTTACATCGTCCATGGTCAGAGTTTGTAGTTTGTGTTATACTTGAGTATGCAGTTCAACTTTCCTTTATGAAAACCGCTGGTGTGTTTACTTTCAGATGTCTGTAGAAGTGTAGTGCGTCTTTAAAGTTGCACAATGTTACTTTTGATAGAAACTATGTAATGCATCTGTTGATTCAGAATTTCTTTTCCTGAAATATGTGCCCAATGAGCATACTAATGGGATATATATATATATATATATATGTATATTTTGAAACAACGTATTAATGGTATATTAGGAGCATTTATCTTCTATTGTAGTGGCCTGTGTGCTTTCAATGATTGCATCAGCCAGATGTAGAGAAATGAGTTTAGGAATTTTTGTATTTTGGCAACCAATACTTACAAAGATGCATAAAGAACTTCACTCTTCAGTAGTTCTATCTTTCATGGTATATTAGGTGAAAAAGTATCTTTCATGGTCGGAGTGGTCTACTTTTTTTGTTTGTTTTGCATGTTGCCTAATCAGCATTTTCTCACGCTTAGCCAACATTCATTTACTCTAGGTTGAAATTGGTTAATTGACCGGATCGTTGCAAGGTAAAAATCTTGCATGACTTGATCGTCAACTGTCACTTTCTCCCTATTTCGGGAAGTAGTTTGTGGGCTTCATTCGTCAATATAAACAAATTTTCCGGTAACACACCTGCTGAGCTTGCTGGAATTGGCCCTTGCGCAAATTTTGGTGTTTACACAGCCAATTGTCTGTTTGTCCCTTCAAGTGGTATTAAGAATATGCTGCAATTATTACTATTTGCCTAAGGTTCTACTAAATAGATTCAATTTATGCGTGAAGTTTCTTTCTGGAGCAGTTTTTCCGGCTTGGGAATTAAGCCAATTTCTAGTCATGTGTTATACTCTACTTAAATGAATCAATGGAGGCCTGAAACTGCACTAGTTAGGATTGTCAAACCATTTTGAATCTACTTAATGAATCAATTTGTTCTATTGCTTCGAGAGGGTTTTCCTAATGATGGATCCTTTTCAATATGGTAAGAATAGGTAGCCATCTCGTCAAAATTAGGTTTTATCATGTTTGTTCAATTTTTTATACACTCATGCAAAAAGTTTGAAACATCTTTAGCGCCATTTCTATACCTGGAAGCTGTAGTATGAAATGGAGAAACTTATCTTTCTGTTTGTGCCCTAACTGCAGGCAACTAAGGATAGGTACCGAAATAAAGGAGCATATATTATTTTGGAACCTCCTAATTTTGACATCCCCGTTTATCGTAGTTTTGAAGCAGTGATGCCCCGACCCAAGGTATAGAACAGTTTGAAGCTTTGTCTTATCTTGAATTGAAATTCATGGGGTGTTCTTTTGTAAACAATGAGTAATTTGTTTGAAATTACTTGCATTGTCATGGCTGTTTAATGTAATAATAACATTGACTAAGTTATTGTCACAGGTGAATCCATATTATGATTTTGAAGATTGCATTGATTCTGA</genome_strand>
        <mrna_strand>CATCGTTGTTGCCGGTAGTGGTGTTTGATCGGCTTATACTAACGGCTTCCAAGATCTTGCATAAAGAACCCAATTGTGTGCATATTGATAGCGGGTCGGGGTTGGGAAATGATTCGAGGGTTGTTGTGGTTGGGGACGTGCACGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTCAATGGAGACTATGTCGATAGAGGCGCTTGGGGTCTTGAGACCTTTCTTACCTTGTTGGCTTGGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTATGCCCAATAGGGTGTTTCTCCTTCGTGGAAATCACGAGTCGAAGTACTGTACTTCTGTTTATGGTTTTGAAAAGGAGGTTCTAGCGAAGTATGCGGATAGTGGGAAACATGTATACAGGAAATGTTTAGGATGCTTCGAAGGACTTCCTCTTGCATCCATTATTGGGGATCATGTCTACACAGCTCATGGAG................................................................................................................................................................................................ACCCGTCAATGAAACCTGGACTTTCCCCAAATAAAGAAAGAGGAATTGGTCTCTTATGGGGTCCGGATTGCACCGAAGATTTCTTGAAGATGTTGAATTTAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTATTAGGTCACATGAAGGTCCAGATGCAAGGGAAAAGAGAGAGGGAATGGAAGGAATGGATCAAGGGTACACCATAGATCATGAGGTCCAGTCCGGTAAATTGATTACAGTGTTTAGTGCCCCAGACTATCCACAGTTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACTAAGGATAGGTACCGAAATAAAGGAGCATATATTATTTTGGAACCTCCTAATTTTGACATCCCCCGTTATCGTAGTTTTGAAGCAGTGATGCCCCGACCCAAA.................................................................................................................................................GTGAATCCATATTATGATTTTGAAGATTGCATTGATTCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E396603" ref_strand="+" ref_description="SGN-E396603 [TUS-43-B19]">
      <seq>cacggccagctacatgatgtcttgttcttattgagagatgcgggttttccctctgacgatcggttctttgtgttcaatggagactatgtcgatagaggcgcttggggtcttgagacctttcttaccttgttggcttggaaggtttttatgcccaatagggtgtttctccttcgtggaaatcacgagtcgaagtactgtacttctgtttatggttttgaaaaggaggttctagcgaagtatgcggatagtgggaaacatgtatacaggaaatgtttaggatgcttcgaaggacttcctcttgcatccattattggggatcatgtctacacagctcatggaggtattttccgcagtattgctgtcactccagctaaaagagctaaagggaagaagaaccgtaaaatagtttcaaaccctgatgttactactttatctcttggttctatggaggaattattaaaagctaggagatctgtccttgatcctccttgggaaggtacgaatctgataccgggtgatgtcttgtggtcagacccgtcaatgaaacctggactttccccaaataaagaaagaggaattggtctcttatggggtccggattgcaccgaagatttcttgaagatgttgaatttaaagttgattattaggtcacatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="133471" stop="129394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="133171" g_stop="133031" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="141" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="133030" i_stop="132299" i_length="732">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132298" g_stop="131804" g_length="495"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="636" r_length="495" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="131803" i_stop="129713" i_length="2091">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="129712" g_stop="129694" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="637" r_stop="655" r_length="19" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E396603" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>655</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E396603" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="133171" e_stop="133031"/>
          <exon e_start="132298" e_stop="131804"/>
          <exon e_start="129712" e_stop="129694"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTCAATGGAGACTATGTCGATAGAGGCGCTTGGGGTCTTGAGACCTTTCTTACCTTGTTGGCTTGGAAGGTAAAATCTTTTTAACAAATTTTGAATTCTTTGTTTCCTGTAATGAAAATTTTGAACTGTTTTTATGAAATATTTAGGTAATGTAGTTTGAAATTCCCGTTTGGTAGTGTTTAGTATCAATTATGTTGTTACTTAGTTGATTATCTTACTTTTACTACATATCACAAGTTGTGTCTGGTGATAAGATAACAACTTTACTGTGTTTATGTATGGAATTTATGTCAGCAAATGTAATTGTTGATCATAATTATCAGTTTTATGTGGTCACTTAGCATGGAGAATTAGGGCTTTGTAAAGCTTGACGAGGTATTCTTCCTATAGAGATAGTTTGTTACTTTGTCATTGGCAACGTCATTTAACATCTGGAGGTTGTACAACAACAAAATGGGACGGTGATGCTTAACTTTAAAGTACCAGGTTTTGTATCATGGTAATCTGTAGAACAGGCAAATTCAGTTTTGGTTAAGCTTTATTATCCTTCATCTTCCTTTGAGTTTTGTATCAATTATGATGTTTCCTTGGTAATATTGGTTCATTCCTGTGCCTTGTTTAGCTGGGATAGGATAATATGCATCAAGTAACAGTGAGCTAGAAGCACCTTACTTCAACTTGATATTTGATTTGTGTTGTAACTTTTGAACTCAACTGGTTCATGTAATTGACTTTCTAGCTTATATCAGTCAGATGCAACTGTGGATATTCAATATTCAATCAAACTGTACATTCTTTCAGGTTTTTATGCCCAATAGGGTGTTTCTCCTTCGTGGAAATCACGAGTCGAAGTACTGTACTTCTGTTTATGGTTTTGAAAAGGAGGTTCTAGCGAAGTATGCGGATAGTGGGAAACATGTATACAGGAAATGTTTAGGATGCTTCGAAGGACTTCCTCTTGCATCCATTATTGGGGATCATGTCTACACAGCTCATGGAGGTATTTTCCGCAGTATTGCTGTCACTCCAGCTAAAAGAGCTAAAGGGAAGAAGAACCGTAAAATAGTTTCAAACCCTGATGTTACTACTTTATCTCTTGGTTCTATGGAGGAATTATTAAAAGCTAGGAGATCTGTCCTTGATCCTCCTTGGGAAGGTACGAATCTGATACCGGGTGATGTCTTGTGGTCAGACCCGTCAATGAAACCTGGACTTTCCCCAAATAAAGAAAGAGGAATTGGTCTCTTATGGGGTCCGGATTGCACCGAAGATTTCTTGAAGATGTTGAATTTAAAGGTAAACTACTTGGAATTGTATTTCTTTCTTTGTATATGCTCTTTTCTTCTTGTTATTGATATAGCCTACTGCTAAATTACTTTGAAGTTGTCTTTTAACAGAGCTTAAAGTACATTTTTTTATCATTTATTTTTGAATGAAATTCTACAATATATTATGTCTTGTTCGCACGGTTTTATGGTGCGAATGATGTGATTGGACGTAATATTATTCAGAATATAATCTTTGACTTTGTAGTTTTTGTATTAAACTTCAATAGCTTCCATTAAGTGGGTTGTACTGTTTGTCAAAATATAATCTTTGAATTTGTAGTTCTTGGATTCGATTTCAATAGCTCTATTTTAAACTATGTTTGATTGAGGTGTAAGAAGAGGGGTTTGAGGAAGAATAAGGGTTGTTACTCTCGTCTATACAAGGAAGTTAAAGAAGAGGTGGAGTGTCCCCCCCCTCAATTTTACTCATTTTCCAACTTTACCAACCCTATTAGTCAACTAGGTGCAAACTAATTAATATCTGACCCAAGGCAAACCAACTACTTTATCTTCCTTCACTCTCTCTCATTTTTTCGGGAACCAATTGTTAACCAACCTTTGTGCTAGAACCATAGTTCCTGCAGTTTGAGTCATATATCCATATAAGCAATTAAGATAGGATGGGACTCACAAGTTGAAGTTACTCATATTTCTCTCTCTTTTTTGTACAAATTTTCACTAGGATATACTTTTATTTTTATGTATTTTACCGTAGTCATAACAATTCAGTTATACCTTTGCTGTAACTTGTAATATTTTGGAGATAAAGTAAGAAAATTCCTTAAGAAAAGGGCAAACCCCTTATACATGAAATGCCAAAAAGCAGAGAACCTTGCAAAAATACATGGTTTTCCATTAATGACATCACTTGATATTTAAATCCATCAATATTCTTGTCACATGACAGTTCAAATATTGGGTTGTTGCCTTATCTGTATACTCATGGAGTTCTGTGTTCACCTCATCAACATTTCCTCCTTGAGGATGAACATTGAAACTATTCTATCAGGCAAGGCTGCTAGGGAAATGATCCAATCTTCTTTCAGATGAAACTAATTAATTATCTGCATAATTTGAGTCCACTAGAAGATAAACATAACTAATCAAAGCAACTTCAAAGATCGAATAAGATTTATTACACGTGTGACGTGTTTGACTTACCTATGCAGAGATAATGGACAAGGCTGTACTATTTTTTAAAATATGGTGCACTCCTATTTAGTGGACTGAAAGGCTCTCATTGCACTTTCCTTTCGTCTGGTTCCATCATTGACTTGGTTCATCAATTTGATTTAGTAGTCAATAAGATGGACATACAAAGAGTTGATGCACCTCTTTTCAATGTCAATAAACAAGTCTTTTCATTTGTGAAAAAAAGGGTCTTTTCATATTTATTCACCTGAAGGAGGCTGGTTGTAACATGTTTTTCTTGAGTAGAGCATTGGTTTTATATCCAGTTGCAATGCAATACTAGTAATATTAACCAATTTCAAACGCATGAGTGTAGACATAACTATACTGGGTGTCTAAGAAAATCATGCTACTACCTGTACTCATTTAAGTAAGAAAATGATCTGGTTGTTGCCTTAAAAACTAGTACGCTATGATAGTAGTGCCATTAATATCTGAAATTCTTTCCTTTTTCTGACATAGCGGATCCAGTGTAGCTGGGAAATCAGAATATTTCCTAGAGATTACCGATGAACCTTTGGAGATGAATTTACTTGTTTTGAAGCCCAATCATTTCATTGGAAAAAGGAAAGAAAAATGTTGTATGAGATCTTAATTCCAAGTATCTGTGAACGAAGCATTTAACCACTTAAAGACCCACAAAGAAGTGAAGAAGCACAAAGGATGAAGATACTTTTACGTGACGAAGGCCTCTCACGTAATATTTGCCTGTTCAGGACTACTCTTATTTTGCACCTATACTATTTATGTTTACATTATTCATGTAATTTTAGGTTCTTGTATTTTCTGTGAGCTTGACATCTTCTTTTGTGACTTCTATATGTGAGAAAATTGCTCACGTTATGGTCTTTGATTGCTGCAACCTCAGTTGATTATTAGGTCACATG</genome_strand>
        <mrna_strand>CACGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTCAATGGAGACTATGTCGATAGAGGCGCTTGGGGTCTTGAGACCTTTCTTACCTTGTTGGCTTGGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTATGCCCAATAGGGTGTTTCTCCTTCGTGGAAATCACGAGTCGAAGTACTGTACTTCTGTTTATGGTTTTGAAAAGGAGGTTCTAGCGAAGTATGCGGATAGTGGGAAACATGTATACAGGAAATGTTTAGGATGCTTCGAAGGACTTCCTCTTGCATCCATTATTGGGGATCATGTCTACACAGCTCATGGAGGTATTTTCCGCAGTATTGCTGTCACTCCAGCTAAAAGAGCTAAAGGGAAGAAGAACCGTAAAATAGTTTCAAACCCTGATGTTACTACTTTATCTCTTGGTTCTATGGAGGAATTATTAAAAGCTAGGAGATCTGTCCTTGATCCTCCTTGGGAAGGTACGAATCTGATACCGGGTGATGTCTTGTGGTCAGACCCGTCAATGAAACCTGGACTTTCCCCAAATAAAGAAAGAGGAATTGGTCTCTTATGGGGTCCGGATTGCACCGAAGATTTCTTGAAGATGTTGAATTTAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTATTAGGTCACATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E297507" ref_strand="+" ref_description="SGN-E297507 [cLET-28-M22]">
      <seq>tgtggttggggacgtgcacggccagctacatgatgtcttgttcttattgagagatgcgggttttccctctgacgatcggttctttgtgttcaatggagactatgtcgatagaggcgcttggggtcttgagacctttcttaccttgttggcttggaaggtttttatgcccaatagggtgtttctccttcgtggaaatcacgagtcgaagtactgtacttctgtttatggttttgaaaaggaggttctagcgaagtatgcggatagtgggaaacatgtatacaggaaatgtttaggatgcttcgaaggacttcctcttgcatccattattggggatcatgtctacacagctcatggaggtattttccgcagtattgctgtcactccagctaaaagagctaaagggaagaagaaccgtaaaatagtttcaaaccctgatgttactactttatctcttggttctatggaggaattattaaaagctaggagatctgtccttgatcctccttgggaaggtacgaatctgatacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="133487" stop="131628"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="133187" g_stop="133031" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="157" r_length="157" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="133030" i_stop="132299" i_length="732">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132298" g_stop="131928" g_length="371"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="528" r_length="371" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E297507" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>528</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E297507" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="133187" e_stop="133031"/>
          <exon e_start="132298" e_stop="131928"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGGTTGGGGACGTGCACGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTCAATGGAGACTATGTCGATAGAGGCGCTTGGGGTCTTGAGACCTTTCTTACCTTGTTGGCTTGGAAGGTAAAATCTTTTTAACAAATTTTGAATTCTTTGTTTCCTGTAATGAAAATTTTGAACTGTTTTTATGAAATATTTAGGTAATGTAGTTTGAAATTCCCGTTTGGTAGTGTTTAGTATCAATTATGTTGTTACTTAGTTGATTATCTTACTTTTACTACATATCACAAGTTGTGTCTGGTGATAAGATAACAACTTTACTGTGTTTATGTATGGAATTTATGTCAGCAAATGTAATTGTTGATCATAATTATCAGTTTTATGTGGTCACTTAGCATGGAGAATTAGGGCTTTGTAAAGCTTGACGAGGTATTCTTCCTATAGAGATAGTTTGTTACTTTGTCATTGGCAACGTCATTTAACATCTGGAGGTTGTACAACAACAAAATGGGACGGTGATGCTTAACTTTAAAGTACCAGGTTTTGTATCATGGTAATCTGTAGAACAGGCAAATTCAGTTTTGGTTAAGCTTTATTATCCTTCATCTTCCTTTGAGTTTTGTATCAATTATGATGTTTCCTTGGTAATATTGGTTCATTCCTGTGCCTTGTTTAGCTGGGATAGGATAATATGCATCAAGTAACAGTGAGCTAGAAGCACCTTACTTCAACTTGATATTTGATTTGTGTTGTAACTTTTGAACTCAACTGGTTCATGTAATTGACTTTCTAGCTTATATCAGTCAGATGCAACTGTGGATATTCAATATTCAATCAAACTGTACATTCTTTCAGGTTTTTATGCCCAATAGGGTGTTTCTCCTTCGTGGAAATCACGAGTCGAAGTACTGTACTTCTGTTTATGGTTTTGAAAAGGAGGTTCTAGCGAAGTATGCGGATAGTGGGAAACATGTATACAGGAAATGTTTAGGATGCTTCGAAGGACTTCCTCTTGCATCCATTATTGGGGATCATGTCTACACAGCTCATGGAGGTATTTTCCGCAGTATTGCTGTCACTCCAGCTAAAAGAGCTAAAGGGAAGAAGAACCGTAAAATAGTTTCAAACCCTGATGTTACTACTTTATCTCTTGGTTCTATGGAGGAATTATTAAAAGCTAGGAGATCTGTCCTTGATCCTCCTTGGGAAGGTACGAATCTGATACC</genome_strand>
        <mrna_strand>TGTGGTTGGGGACGTGCACGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTCAATGGAGACTATGTCGATAGAGGCGCTTGGGGTCTTGAGACCTTTCTTACCTTGTTGGCTTGGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTATGCCCAATAGGGTGTTTCTCCTTCGTGGAAATCACGAGTCGAAGTACTGTACTTCTGTTTATGGTTTTGAAAAGGAGGTTCTAGCGAAGTATGCGGATAGTGGGAAACATGTATACAGGAAATGTTTAGGATGCTTCGAAGGACTTCCTCTTGCATCCATTATTGGGGATCATGTCTACACAGCTCATGGAGGTATTTTCCGCAGTATTGCTGTCACTCCAGCTAAAAGAGCTAAAGGGAAGAAGAACCGTAAAATAGTTTCAAACCCTGATGTTACTACTTTATCTCTTGGTTCTATGGAGGAATTATTAAAAGCTAGGAGATCTGTCCTTGATCCTCCTTGGGAAGGTACGAATCTGATACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E252457" ref_strand="+" ref_description="SGN-E252457 [cLEG-12-P20]">
      <seq>tgccatcggtgttgccggtagtggtgtttgatcggcttatactaacggcttccaagatcttgcataaagaacccaattgtgtgcatattgatagcgggtcggggttgggaaatgattcgagggttgttgtggttggggacgtgcacggccagctacatgatgtcttgttcttattgagagatgcgggttttccctctgacgatcggttctttgtgttcaatggagactatgtcgatagaggcgcttggggtcttgagacctttcttaccttgttggcttggaaggtttttatgcccaatagggtgtttctccttcgtggaaatcacgagtcgaagtactgtacttctgtttatggttttgaaaaggaggttctagcgaagtatgcggatagtgggaaacatgtatacaggaaatgtttaggatgcttcgaaggacttcctcttgcatccattattggggatcatgtctacacagctcatggaggtattttccgcagtattgctgtcactccagctaaaagagctaaagggaagaagaaccgtaaaatagtttcaaaccctgatgttactactttatctcttggttctatggaggaatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="133614" stop="131684"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="133314" g_stop="133031" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="284" r_length="284" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="133030" i_stop="132299" i_length="732">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132298" g_stop="131984" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="599" r_length="315" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E252457" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>599</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E252457" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="133314" e_stop="133031"/>
          <exon e_start="132298" e_stop="131984"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCCATCGGTGTTGCCGGTAGTGGTGTTTGATCGGCTTATACTAACGGCTTCCAAGATCTTGCATAAAGAACCCAATTGTGTGCATATTGATAGCGGGTCGGGGTTGGGAAATGATTCGAGGGTTGTTGTGGTTGGGGACGTGCACGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTCAATGGAGACTATGTCGATAGAGGCGCTTGGGGTCTTGAGACCTTTCTTACCTTGTTGGCTTGGAAGGTAAAATCTTTTTAACAAATTTTGAATTCTTTGTTTCCTGTAATGAAAATTTTGAACTGTTTTTATGAAATATTTAGGTAATGTAGTTTGAAATTCCCGTTTGGTAGTGTTTAGTATCAATTATGTTGTTACTTAGTTGATTATCTTACTTTTACTACATATCACAAGTTGTGTCTGGTGATAAGATAACAACTTTACTGTGTTTATGTATGGAATTTATGTCAGCAAATGTAATTGTTGATCATAATTATCAGTTTTATGTGGTCACTTAGCATGGAGAATTAGGGCTTTGTAAAGCTTGACGAGGTATTCTTCCTATAGAGATAGTTTGTTACTTTGTCATTGGCAACGTCATTTAACATCTGGAGGTTGTACAACAACAAAATGGGACGGTGATGCTTAACTTTAAAGTACCAGGTTTTGTATCATGGTAATCTGTAGAACAGGCAAATTCAGTTTTGGTTAAGCTTTATTATCCTTCATCTTCCTTTGAGTTTTGTATCAATTATGATGTTTCCTTGGTAATATTGGTTCATTCCTGTGCCTTGTTTAGCTGGGATAGGATAATATGCATCAAGTAACAGTGAGCTAGAAGCACCTTACTTCAACTTGATATTTGATTTGTGTTGTAACTTTTGAACTCAACTGGTTCATGTAATTGACTTTCTAGCTTATATCAGTCAGATGCAACTGTGGATATTCAATATTCAATCAAACTGTACATTCTTTCAGGTTTTTATGCCCAATAGGGTGTTTCTCCTTCGTGGAAATCACGAGTCGAAGTACTGTACTTCTGTTTATGGTTTTGAAAAGGAGGTTCTAGCGAAGTATGCGGATAGTGGGAAACATGTATACAGGAAATGTTTAGGATGCTTCGAAGGACTTCCTCTTGCATCCATTATTGGGGATCATGTCTACACAGCTCATGGAGGTATTTTCCGCAGTATTGCTGTCACTCCAGCTAAAAGAGCTAAAGGGAAGAAGAACCGTAAAATAGTTTCAAACCCTGATGTTACTACTTTATCTCTTGGTTCTATGGAGGAATTA</genome_strand>
        <mrna_strand>TGCCATCGGTGTTGCCGGTAGTGGTGTTTGATCGGCTTATACTAACGGCTTCCAAGATCTTGCATAAAGAACCCAATTGTGTGCATATTGATAGCGGGTCGGGGTTGGGAAATGATTCGAGGGTTGTTGTGGTTGGGGACGTGCACGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTCAATGGAGACTATGTCGATAGAGGCGCTTGGGGTCTTGAGACCTTTCTTACCTTGTTGGCTTGGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTATGCCCAATAGGGTGTTTCTCCTTCGTGGAAATCACGAGTCGAAGTACTGTACTTCTGTTTATGGTTTTGAAAAGGAGGTTCTAGCGAAGTATGCGGATAGTGGGAAACATGTATACAGGAAATGTTTAGGATGCTTCGAAGGACTTCCTCTTGCATCCATTATTGGGGATCATGTCTACACAGCTCATGGAGGTATTTTCCGCAGTATTGCTGTCACTCCAGCTAAAAGAGCTAAAGGGAAGAAGAACCGTAAAATAGTTTCAAACCCTGATGTTACTACTTTATCTCTTGGTTCTATGGAGGAATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E206436" ref_strand="+" ref_description="SGN-E206436 [cLEC-23-I23]">
      <seq>cggccagctacatgatgtcttgttcttattgagagatgcgggttttccctctgacgatcggttctttgcgttcaatggagactatgtcgattgaggcgcttggggtcttgagacctttcttaccttgttggcttggaaggtttttatgcccaatagggtgtctctccttcgtggaaatcacgagtcgaagtactggacttctgttcatggctttgaaaaggaggttctagcgaaatatgctgatagtgggaaacatgtatacaggaaatgtttaggatgcttcgaaggacttactcttgcatccattattggggatcatgtctacacagctcatggaggtattttccacactattgctgtccctccatctaaaagagctaaagggaaaaagagccgtacaatagtctcagaccctgatgttactactccatctcttggttctatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="133469" stop="131693"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="133169" g_stop="133031" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="139" r_length="139" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="133030" i_stop="132299" i_length="732">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.967" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132298" g_stop="131993" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="445" r_length="306" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E206436" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>445</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E206436" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="133169" e_stop="133031"/>
          <exon e_start="132298" e_stop="131993"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTCAATGGAGACTATGTCGATAGAGGCGCTTGGGGTCTTGAGACCTTTCTTACCTTGTTGGCTTGGAAGGTAAAATCTTTTTAACAAATTTTGAATTCTTTGTTTCCTGTAATGAAAATTTTGAACTGTTTTTATGAAATATTTAGGTAATGTAGTTTGAAATTCCCGTTTGGTAGTGTTTAGTATCAATTATGTTGTTACTTAGTTGATTATCTTACTTTTACTACATATCACAAGTTGTGTCTGGTGATAAGATAACAACTTTACTGTGTTTATGTATGGAATTTATGTCAGCAAATGTAATTGTTGATCATAATTATCAGTTTTATGTGGTCACTTAGCATGGAGAATTAGGGCTTTGTAAAGCTTGACGAGGTATTCTTCCTATAGAGATAGTTTGTTACTTTGTCATTGGCAACGTCATTTAACATCTGGAGGTTGTACAACAACAAAATGGGACGGTGATGCTTAACTTTAAAGTACCAGGTTTTGTATCATGGTAATCTGTAGAACAGGCAAATTCAGTTTTGGTTAAGCTTTATTATCCTTCATCTTCCTTTGAGTTTTGTATCAATTATGATGTTTCCTTGGTAATATTGGTTCATTCCTGTGCCTTGTTTAGCTGGGATAGGATAATATGCATCAAGTAACAGTGAGCTAGAAGCACCTTACTTCAACTTGATATTTGATTTGTGTTGTAACTTTTGAACTCAACTGGTTCATGTAATTGACTTTCTAGCTTATATCAGTCAGATGCAACTGTGGATATTCAATATTCAATCAAACTGTACATTCTTTCAGGTTTTTATGCCCAATAGGGTGTTTCTCCTTCGTGGAAATCACGAGTCGAAGTACTGTACTTCTGTTTATGGTTTTGAAAAGGAGGTTCTAGCGAAGTATGCGGATAGTGGGAAACATGTATACAGGAAATGTTTAGGATGCTTCGAAGGACTTCCTCTTGCATCCATTATTGGGGATCATGTCTACACAGCTCATGGAGGTATTTTCCGCAGTATTGCTGTCACTCCAGCTAAAAGAGCTAAAGGGAAGAAGAACCGTAAAATAGTTTCAAACCCTGATGTTACTACTTTATCTCTTGGTTCTATG</genome_strand>
        <mrna_strand>CGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGCGTTCAATGGAGACTATGTCGATTGAGGCGCTTGGGGTCTTGAGACCTTTCTTACCTTGTTGGCTTGGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTATGCCCAATAGGGTGTCTCTCCTTCGTGGAAATCACGAGTCGAAGTACTGGACTTCTGTTCATGGCTTTGAAAAGGAGGTTCTAGCGAAATATGCTGATAGTGGGAAACATGTATACAGGAAATGTTTAGGATGCTTCGAAGGACTTACTCTTGCATCCATTATTGGGGATCATGTCTACACAGCTCATGGAGGTATTTTCCACACTATTGCTGTCCCTCCATCTAAAAGAGCTAAAGGGAAAAAGAGCCGTACAATAGTCTCAGACCCTGATGTTACTACTCCATCTCTTGGTTCTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E397302" ref_strand="+" ref_description="SGN-E397302 [TUS-45-K14]">
      <seq>ttgtggttggggacgtgcacggccagctacatgatgtcttgttcttattgagagatgcgggttttccctctgacgatcggttctttgtgttcaatggagactatgtcgatagaggcgcttggggtcttgagacctttcttaccttgttggcttggaaggtttttatgcccaatagggtgtttctccttcgtggaaatcacgagtcgaagtactgtacttctgtttatggttttgaaaaggaggttctagcgaagtatgcggatagtgggaaacatgtatacaggatatgtttaggatgcttcgaaggacttcctcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="133488" stop="131839"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="133188" g_stop="133031" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="158" r_length="158" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="133030" i_stop="132299" i_length="732">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132298" g_stop="132139" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="159" r_stop="318" r_length="160" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E397302" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>318</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E397302" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="133188" e_stop="133031"/>
          <exon e_start="132298" e_stop="132139"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTGGTTGGGGACGTGCACGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTCAATGGAGACTATGTCGATAGAGGCGCTTGGGGTCTTGAGACCTTTCTTACCTTGTTGGCTTGGAAGGTAAAATCTTTTTAACAAATTTTGAATTCTTTGTTTCCTGTAATGAAAATTTTGAACTGTTTTTATGAAATATTTAGGTAATGTAGTTTGAAATTCCCGTTTGGTAGTGTTTAGTATCAATTATGTTGTTACTTAGTTGATTATCTTACTTTTACTACATATCACAAGTTGTGTCTGGTGATAAGATAACAACTTTACTGTGTTTATGTATGGAATTTATGTCAGCAAATGTAATTGTTGATCATAATTATCAGTTTTATGTGGTCACTTAGCATGGAGAATTAGGGCTTTGTAAAGCTTGACGAGGTATTCTTCCTATAGAGATAGTTTGTTACTTTGTCATTGGCAACGTCATTTAACATCTGGAGGTTGTACAACAACAAAATGGGACGGTGATGCTTAACTTTAAAGTACCAGGTTTTGTATCATGGTAATCTGTAGAACAGGCAAATTCAGTTTTGGTTAAGCTTTATTATCCTTCATCTTCCTTTGAGTTTTGTATCAATTATGATGTTTCCTTGGTAATATTGGTTCATTCCTGTGCCTTGTTTAGCTGGGATAGGATAATATGCATCAAGTAACAGTGAGCTAGAAGCACCTTACTTCAACTTGATATTTGATTTGTGTTGTAACTTTTGAACTCAACTGGTTCATGTAATTGACTTTCTAGCTTATATCAGTCAGATGCAACTGTGGATATTCAATATTCAATCAAACTGTACATTCTTTCAGGTTTTTATGCCCAATAGGGTGTTTCTCCTTCGTGGAAATCACGAGTCGAAGTACTGTACTTCTGTTTATGGTTTTGAAAAGGAGGTTCTAGCGAAGTATGCGGATAGTGGGAAACATGTATACAGGAAATGTTTAGGATGCTTCGAAGGACTTCCTCTTG</genome_strand>
        <mrna_strand>TTGTGGTTGGGGACGTGCACGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTCAATGGAGACTATGTCGATAGAGGCGCTTGGGGTCTTGAGACCTTTCTTACCTTGTTGGCTTGGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTATGCCCAATAGGGTGTTTCTCCTTCGTGGAAATCACGAGTCGAAGTACTGTACTTCTGTTTATGGTTTTGAAAAGGAGGTTCTAGCGAAGTATGCGGATAGTGGGAAACATGTATACAGGATATGTTTAGGATGCTTCGAAGGACTTCCTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E302367" ref_strand="+" ref_description="SGN-E302367 [cLEW-27-K2]">
      <seq>agttgaaatgttatcagaatcagaaccaccggctgcagccgccagtttaccatcagcaacccctccgccgccgtcgtccgatgaggacttcttctcgtctgtatcagtggcatcgacgtcttccacgtcatcgccatccaccccgattccttcaccaccacagcttcatccagagatcccaatttcatggcctgaagacgggaccttaaccctagcttgggttaccaacttgatgctagcatttgattggtcatccaagaatcttgctccgacggagctgccatcggtgttgccggtagtggtgtttgatcggcttatactaacggcttccaagatcttgcataaagaacccaattgtgtgcatattgatagcgggtcggggttgggaaatgattcgagggttgttgtggttggggacgtgcacggccagctacatgatgtcttgttcttattgagagatgcgggttttccctctgacgatcggttctttgtgttcaatggagactatgtcgatagaggcgcttggggtcttgagacctttcttacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="133892" stop="132746"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="133592" g_stop="133046" g_length="547"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="547" r_length="547" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E302367" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E302367" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="133592" e_stop="133046"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTGAAATGTTATCAGAATCAGAACCACCGGCTGCAGCCGCCAGTTTACCATCAGCAACCCCTCCGCCGCCGTCGTCCGATGAGGACTTCTTCTCGTCTGTATCAGTGGCATCGACGTCTTCCACGTCATCGCCATCCACCCCGATTCCTTCACCACCACAGCTTCATCCAGAGATCCCAATTTCATGGCCTGAAGACGGGACCTTAACCCTAGCTTGGGTTACCAACTTGATGCTAGCATTTGATTGGTCATCCAAGAATCTTGCTCCGACGGAGCTGCCATCGGTGTTGCCGGTAGTGGTGTTTGATCGGCTTATACTAACGGCTTCCAAGATCTTGCATAAAGAACCCAATTGTGTGCATATTGATAGCGGGTCGGGGTTGGGAAATGATTCGAGGGTTGTTGTGGTTGGGGACGTGCACGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTCAATGGAGACTATGTCGATAGAGGCGCTTGGGGTCTTGAGACCTTTCTTACC</genome_strand>
        <mrna_strand>AGTTGAAATGTTATCAGAATCAGAACCACCGGCTGCAGCCGCCAGTTTACCATCAGCAACCCCTCCGCCGCCGTCGTCCGATGAGGACTTCTTCTCGTCTGTATCAGTGGCATCGACGTCTTCCACGTCATCGCCATCCACCCCGATTCCTTCACCACCACAGCTTCATCCAGAGATCCCAATTTCATGGCCTGAAGACGGGACCTTAACCCTAGCTTGGGTTACCAACTTGATGCTAGCATTTGATTGGTCATCCAAGAATCTTGCTCCGACGGAGCTGCCATCGGTGTTGCCGGTAGTGGTGTTTGATCGGCTTATACTAACGGCTTCCAAGATCTTGCATAAAGAACCCAATTGTGTGCATATTGATAGCGGGTCGGGGTTGGGAAATGATTCGAGGGTTGTTGTGGTTGGGGACGTGCACGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTCAATGGAGACTATGTCGATAGAGGCGCTTGGGGTCTTGAGACCTTTCTTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E306357" ref_strand="+" ref_description="SGN-E306357 [cLEX-13-F1]">
      <seq>aaaattagagaaaattaacgaaaatcgcgcatccagttgaaatgttatcagaatcagaaccaccggctgcagccgccagtttaccatcagcaacccctccgccgccgtcgtccgatgaggacttcttctcgtctgtatcagtggcatcgacgtcttccacgtcatcgccatccaccccgattccttcaccaccacagcttcatccagagatcccaatttcatggcctgaagacgggaccttaaccctagcttgggttaccaacttgatgctagcatttgattggtcatccaagaatcttgctccgacggagctgccatcggtgttgccggtagtggtgtttgatcggcttatactaacggcttccaagatcttgcataaagaacccaattgtgtgcatattgatagcgggtcggggttgggaaatgattcgagggttgttgtggttggggacgtgcacggccagctacatgatgtcttgttcttattgagagatgcgggttttccctctgacgatcggttctttgtgttcaatggagactatgtcgatagaggcgcttggggtcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="133926" stop="132760"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="133626" g_stop="133060" g_length="567"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="567" r_length="567" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E306357" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E306357" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="133626" e_stop="133060"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATTAGAGAAAATTAACGAAAATCGCGCATCCAGTTGAAATGTTATCAGAATCAGAACCACCGGCTGCAGCCGCCAGTTTACCATCAGCAACCCCTCCGCCGCCGTCGTCCGATGAGGACTTCTTCTCGTCTGTATCAGTGGCATCGACGTCTTCCACGTCATCGCCATCCACCCCGATTCCTTCACCACCACAGCTTCATCCAGAGATCCCAATTTCATGGCCTGAAGACGGGACCTTAACCCTAGCTTGGGTTACCAACTTGATGCTAGCATTTGATTGGTCATCCAAGAATCTTGCTCCGACGGAGCTGCCATCGGTGTTGCCGGTAGTGGTGTTTGATCGGCTTATACTAACGGCTTCCAAGATCTTGCATAAAGAACCCAATTGTGTGCATATTGATAGCGGGTCGGGGTTGGGAAATGATTCGAGGGTTGTTGTGGTTGGGGACGTGCACGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTCAATGGAGACTATGTCGATAGAGGCGCTTGGGGTCTTG</genome_strand>
        <mrna_strand>AAAATTAGAGAAAATTAACGAAAATCGCGCATCCAGTTGAAATGTTATCAGAATCAGAACCACCGGCTGCAGCCGCCAGTTTACCATCAGCAACCCCTCCGCCGCCGTCGTCCGATGAGGACTTCTTCTCGTCTGTATCAGTGGCATCGACGTCTTCCACGTCATCGCCATCCACCCCGATTCCTTCACCACCACAGCTTCATCCAGAGATCCCAATTTCATGGCCTGAAGACGGGACCTTAACCCTAGCTTGGGTTACCAACTTGATGCTAGCATTTGATTGGTCATCCAAGAATCTTGCTCCGACGGAGCTGCCATCGGTGTTGCCGGTAGTGGTGTTTGATCGGCTTATACTAACGGCTTCCAAGATCTTGCATAAAGAACCCAATTGTGTGCATATTGATAGCGGGTCGGGGTTGGGAAATGATTCGAGGGTTGTTGTGGTTGGGGACGTGCACGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTCAATGGAGACTATGTCGATAGAGGCGCTTGGGGTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E268576" ref_strand="+" ref_description="SGN-E268576 [cLEI-13-F21]">
      <seq>ctgtatcagtggcatcgacgtcttccacgtcatcgccatccaccccgattccttcaccaccacagcttcatccagagatcccaatttcatggcctgaagacgggaccttaaccctagcttgggttaccaacttgatgctagcatttgattggtcatccaagaatcttgctccgacggagctgccatcggtgttgccggtagtggtgtttgatcggcttatactaacggcttccaagatcttgcataaagaacccaattgtgtgcatattgatagcgggtcggggttgggaaatgattcgagggttgttgtggttggggacgtgcacggccagctacatgatgtcttgttcttattgagagatgcgggttttccctctgacgatcggttctttgtgttcaatggagactatgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="133794" stop="132782"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="133494" g_stop="133082" g_length="413"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="413" r_length="413" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E268576" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>413</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E268576" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="133494" e_stop="133082"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTATCAGTGGCATCGACGTCTTCCACGTCATCGCCATCCACCCCGATTCCTTCACCACCACAGCTTCATCCAGAGATCCCAATTTCATGGCCTGAAGACGGGACCTTAACCCTAGCTTGGGTTACCAACTTGATGCTAGCATTTGATTGGTCATCCAAGAATCTTGCTCCGACGGAGCTGCCATCGGTGTTGCCGGTAGTGGTGTTTGATCGGCTTATACTAACGGCTTCCAAGATCTTGCATAAAGAACCCAATTGTGTGCATATTGATAGCGGGTCGGGGTTGGGAAATGATTCGAGGGTTGTTGTGGTTGGGGACGTGCACGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTCAATGGAGACTATGTC</genome_strand>
        <mrna_strand>CTGTATCAGTGGCATCGACGTCTTCCACGTCATCGCCATCCACCCCGATTCCTTCACCACCACAGCTTCATCCAGAGATCCCAATTTCATGGCCTGAAGACGGGACCTTAACCCTAGCTTGGGTTACCAACTTGATGCTAGCATTTGATTGGTCATCCAAGAATCTTGCTCCGACGGAGCTGCCATCGGTGTTGCCGGTAGTGGTGTTTGATCGGCTTATACTAACGGCTTCCAAGATCTTGCATAAAGAACCCAATTGTGTGCATATTGATAGCGGGTCGGGGTTGGGAAATGATTCGAGGGTTGTTGTGGTTGGGGACGTGCACGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTCAATGGAGACTATGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E367622" ref_strand="+" ref_description="SGN-E367622 [cLPT-14-M13]">
      <seq>aactgaaaaataaaaataaaaaaaaacaaaaaaagaattagagaaaattaacgaaaatcacgcatccagttgaaatgttatcagaatcagaaccaccggctgcagccgccagtttaccatcagcaacccctccgccgccgtcgtccgatgaggactttttctcgtctgtatcagtggcatcgacgtcttccacgtcatcgccatccaccccgattccttcaccaccacagcttcatccagagatcccaatttcatggcctgaagacgggaccttaaccctagcttgggttaccaacttgatgctggcatttgattggtcatccaagaatcttgctccgacggagctgccatcggtgttgccggtagtggtgtttgatcggcttatactaacggcttccaagatcttgcataaagaacccaattgtgtgcatattgatggcgggtcggggttgggaaataactcgagggttgttgtggttggggacgtgcacggccagctacatgatgtcttgttcttattgagagatgcgggttttccctctgacgatcggttctttgtgttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0172H10-X7PgG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0172H10.1" temp_strand="-" temp_description="C02HBa0172H10.1  AC226510.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0172H10 sequenced_by:kribb upload_account_name:korea">
        <position start="133945" stop="132797"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="133618" g_stop="133097" g_length="522"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="563" r_length="522" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0172H10.1" gen_strand="-" ref_id="SGN-E367622" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>522</cumulative_length_of_scored_exons>
        <coverage percentage="0.927" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0172H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E367622" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="133618" e_stop="133097"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAATTAACGAAAATCGCGCATCCAGTTGAAATGTTATCAGAATCAGAACCACCGGCTGCAGCCGCCAGTTTACCATCAGCAACCCCTCCGCCGCCGTCGTCCGATGAGGACTTCTTCTCGTCTGTATCAGTGGCATCGACGTCTTCCACGTCATCGCCATCCACCCCGATTCCTTCACCACCACAGCTTCATCCAGAGATCCCAATTTCATGGCCTGAAGACGGGACCTTAACCCTAGCTTGGGTTACCAACTTGATGCTAGCATTTGATTGGTCATCCAAGAATCTTGCTCCGACGGAGCTGCCATCGGTGTTGCCGGTAGTGGTGTTTGATCGGCTTATACTAACGGCTTCCAAGATCTTGCATAAAGAACCCAATTGTGTGCATATTGATAGCGGGTCGGGGTTGGGAAATGATTCGAGGGTTGTTGTGGTTGGGGACGTGCACGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTC</genome_strand>
        <mrna_strand>AGAAAATTAACGAAAATCACGCATCCAGTTGAAATGTTATCAGAATCAGAACCACCGGCTGCAGCCGCCAGTTTACCATCAGCAACCCCTCCGCCGCCGTCGTCCGATGAGGACTTTTTCTCGTCTGTATCAGTGGCATCGACGTCTTCCACGTCATCGCCATCCACCCCGATTCCTTCACCACCACAGCTTCATCCAGAGATCCCAATTTCATGGCCTGAAGACGGGACCTTAACCCTAGCTTGGGTTACCAACTTGATGCTGGCATTTGATTGGTCATCCAAGAATCTTGCTCCGACGGAGCTGCCATCGGTGTTGCCGGTAGTGGTGTTTGATCGGCTTATACTAACGGCTTCCAAGATCTTGCATAAAGAACCCAATTGTGTGCATATTGATGGCGGGTCGGGGTTGGGAAATAACTCGAGGGTTGTTGTGGTTGGGGACGTGCACGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>180</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="662" PGL_stop="1"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="662" e_stop="1"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="662" e_stop="1" e_length="662"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="662" stop="1"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543195" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="661" stop="95"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303738" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="401" stop="86"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322166" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATAGTTTTTGAGATCGTCCATGGCAGAAGTGATCCTCCATGTTTACGACTTAACCAAAAGTGACGGGCAAGACGCAGTAAATTTCGGCGTAGTCCAAATGAACAGGCTACTGAAAGACACCATCTCTTTCGGCGGCATGTTCCACACTGCCGTCCAAGTTTACGACAACGTTGAATGGGCTTACGGGTCCTGTGTGATAGGCAGCGGGGTTTTCAGTTGCCCTGCTACTAAAAACCCCAATTACACGTATCGCGAAAAGATTGTATTGGGCAGAACAGAGTGCTCTGCCCACAAAGTCAATCAGATCTTAAAAGATCTTCGCGACGCATGGCCTGGTAGCAAATACAATATGGTGTCAAGGAACTCAAAGCATTTCTGCGATGAGTTCCTTGAGAAATTAGGGGTCCCAAAACTACCGAATTGGGCAAACAGATTTGCTAACATTGGGGATTTAGCAAAGGACGCAGCAGGGATAGCAGTTCAAGCTAAAGAGAAAGCGTCTAAACTTGTGTTTCATCCGGTTGATTTTGCTCTCAACATGACCACTACTAGTAAAAACTCTAAAGCAATATATAACCCTAGTCACGAGTTTAGGTTCCGCTTCAATTTTGCTGTTAATAATTTTAAGGTCGCTGCACCGGTTATCGACCTGCAGGCATGC</gDNA_template>
            <first_frame> H  S  F  *  D  R  P  W  Q  K  *  S  S  M  F  T  T  *  P  K  V  T  G  K  T  Q  *  I  S  A  *  S  K  *  T  G  Y  *  K  T  P  S  L  S  A  A  C  S  T  L  P  S  K  F  T  T  T  L  N  G  L  T  G  P  V  *  *  A  A  G  F  S  V  A  L  L  L  K  T  P  I  T  R  I  A  K  R  L  Y  W  A  E  Q  S  A  L  P  T  K  S  I  R  S  *  K  I  F  A  T  H  G  L  V  A  N  T  I  W  C  Q  G  T  Q  S  I  S  A  M  S  S  L  R  N  *  G  S  Q  N  Y  R  I  G  Q  T  D  L  L  T  L  G  I  *  Q  R  T  Q  Q  G  *  Q  F  K  L  K  R  K  R  L  N  L  C  F  I  R  L  I  L  L  S  T  *  P  L  L  V  K  T  L  K  Q  Y  I  T  L  V  T  S  L  G  S  A  S  I  L  L  L  I  I  L  R  S  L  H  R  L  S  T  C  R  H   </first_frame>
            <second_frame>  I  V  F  E  I  V  H  G  R  S  D  P  P  C  L  R  L  N  Q  K  *  R  A  R  R  S  K  F  R  R  S  P  N  E  Q  A  T  E  R  H  H  L  F  R  R  H  V  P  H  C  R  P  S  L  R  Q  R  *  M  G  L  R  V  L  C  D  R  Q  R  G  F  Q  L  P  C  Y  *  K  P  Q  L  H  V  S  R  K  D  C  I  G  Q  N  R  V  L  C  P  Q  S  Q  S  D  L  K  R  S  S  R  R  M  A  W  *  Q  I  Q  Y  G  V  K  E  L  K  A  F  L  R  *  V  P  *  E  I  R  G  P  K  T  T  E  L  G  K  Q  I  C  *  H  W  G  F  S  K  G  R  S  R  D  S  S  S  S  *  R  E  S  V  *  T  C  V  S  S  G  *  F  C  S  Q  H  D  H  Y  *  *  K  L  *  S  N  I  *  P  *  S  R  V  *  V  P  L  Q  F  C  C  *  *  F  *  G  R  C  T  G  Y  R  P  A  G  M  </second_frame>
            <third_frame>   *  F  L  R  S  S  M  A  E  V  I  L  H  V  Y  D  L  T  K  S  D  G  Q  D  A  V  N  F  G  V  V  Q  M  N  R  L  L  K  D  T  I  S  F  G  G  M  F  H  T  A  V  Q  V  Y  D  N  V  E  W  A  Y  G  S  C  V  I  G  S  G  V  F  S  C  P  A  T  K  N  P  N  Y  T  Y  R  E  K  I  V  L  G  R  T  E  C  S  A  H  K  V  N  Q  I  L  K  D  L  R  D  A  W  P  G  S  K  Y  N  M  V  S  R  N  S  K  H  F  C  D  E  F  L  E  K  L  G  V  P  K  L  P  N  W  A  N  R  F  A  N  I  G  D  L  A  K  D  A  A  G  I  A  V  Q  A  K  E  K  A  S  K  L  V  F  H  P  V  D  F  A  L  N  M  T  T  T  S  K  N  S  K  A  I  Y  N  P  S  H  E  F  R  F  R  F  N  F  A  V  N  N  F  K  V  A  A  P  V  I  D  L  Q  A  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="657" stop="1"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>657</number_coding_nucleotides>
                  <number_encoded_amino_acids>219</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLRSSMAEVILHVYDLTKSDGQDAVNFGVVQMNRLLKDTISFGGMFHTAVQVYDNVEWAYGSCVIGSGVFSCPATKNPNYTYREKIVLGRTECSAHKVNQILKDLRDAWPGSKYNMVSRNSKHFCDEFLEKLGVPKLPNWANRFANIGDLAKDAAGIAVQAKEKASKLVFHPVDFALNMTTTSKNSKAIYNPSHEFRFRFNFAVNNFKVAAPVIDLQAC</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="5468" PGL_stop="6397"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="5468" e_stop="6150"/>
            <exon e_start="6278" e_stop="6397"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.876" e_score="0.998"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="5468" e_stop="6150" e_length="683"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.876">
            <gDNA_intron_boundary i_start="6151" i_stop="6277" i_length="127"/>
          </intron>
          <exon e_serial="2" e_score="0.983">
            <gDNA_exon_boundary e_start="6278" e_stop="6397" e_length="120"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5468" stop="5811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337160" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5494" stop="6081"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302239" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5547" stop="6150"/>
              <exon start="6278" stop="6397"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334841" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAATCAAAAGAGGATTAGCACTGAATCCATTTTCTGATTCAATAATGGAGCTACAACTTTTTCTTGCCACTTTCTTCAGCATATTGCTTCTCATTTTCACAGTGAATTTATTGTCCAAGAAAAGAAAATCAACTCTAAACTTGCCTCCAGGTCCATGGAAATTGCCTTTCATCGGAAGCATTCACCATTTAATTGCTAGCCAATTACCTCACCATACTCTTAGAGACTTGGCCAAAAAACATGGCCCCTTAATGCACTTGCAGCTCGGTGAGATCCCTACGATTGTTATTTCGAGTCCTCGTGTAGCACAAGAGGTATTAAAAACTCACGATCTCGCGTTCACGAATCGTCCTGGGCTGTTAAGTGTACAGATTTTGACTTACAACTATTCAGACATCGCGTTTGCACCTTATGGAAATTACTGGAGACAAATGCGAAAATTATGCACCTTGGAACTATTGAGTGCAAAGAATGTTGTATCATTTGCCTCTATTAGAGAGGAAGAAGCATTCGATCTCCTTCAAGACGTTGAATCAAAATCTGGATCAGTTATTAATCTTACAGAAAAGATATACGCTCTCACAAATGCAGTAATTTGTAGAGCAGCTTTTGGTAAGAGGAGAAAAGAAGAATCAACATATTTCATGTCTTTGATAAAGGAATTATCATTAATGATAACAG : GTTTGGACATAAGTGAGGTGTTTCCTTCGCTGAAGTTTCTGCAAGTCATTACTGGGACTAAAGAAAAATTATTGAAGCTTCATAAAAAGTTTGACAAGGTGCTTGACATGATAATAGAAG</gDNA_template>
            <first_frame> K  N  Q  K  R  I  S  T  E  S  I  F  *  F  N  N  G  A  T  T  F  S  C  H  F  L  Q  H  I  A  S  H  F  H  S  E  F  I  V  Q  E  K  K  I  N  S  K  L  A  S  R  S  M  E  I  A  F  H  R  K  H  S  P  F  N  C  *  P  I  T  S  P  Y  S  *  R  L  G  Q  K  T  W  P  L  N  A  L  A  A  R  *  D  P  Y  D  C  Y  F  E  S  S  C  S  T  R  G  I  K  N  S  R  S  R  V  H  E  S  S  W  A  V  K  C  T  D  F  D  L  Q  L  F  R  H  R  V  C  T  L  W  K  L  L  E  T  N  A  K  I  M  H  L  G  T  I  E  C  K  E  C  C  I  I  C  L  Y  *  R  G  R  S  I  R  S  P  S  R  R  *  I  K  I  W  I  S  Y  *  S  Y  R  K  D  I  R  S  H  K  C  S  N  L  *  S  S  F  W  *  E  E  K  R  R  I  N  I  F  H  V  F  D  K  G  I  I  I  N  D  N  R :   F  G  H  K  *  G  V  S  F  A  E  V  S  A  S  H  Y  W  D  *  R  K  I  I  E  A  S  *  K  V  *  Q  G  A  *  H  D  N  R   </first_frame>
            <second_frame>  K  I  K  R  G  L  A  L  N  P  F  S  D  S  I  M  E  L  Q  L  F  L  A  T  F  F  S  I  L  L  L  I  F  T  V  N  L  L  S  K  K  R  K  S  T  L  N  L  P  P  G  P  W  K  L  P  F  I  G  S  I  H  H  L  I  A  S  Q  L  P  H  H  T  L  R  D  L  A  K  K  H  G  P  L  M  H  L  Q  L  G  E  I  P  T  I  V  I  S  S  P  R  V  A  Q  E  V  L  K  T  H  D  L  A  F  T  N  R  P  G  L  L  S  V  Q  I  L  T  Y  N  Y  S  D  I  A  F  A  P  Y  G  N  Y  W  R  Q  M  R  K  L  C  T  L  E  L  L  S  A  K  N  V  V  S  F  A  S  I  R  E  E  E  A  F  D  L  L  Q  D  V  E  S  K  S  G  S  V  I  N  L  T  E  K  I  Y  A  L  T  N  A  V  I  C  R  A  A  F  G  K  R  R  K  E  E  S  T  Y  F  M  S  L  I  K  E  L  S  L  M  I  T   : G  L  D  I  S  E  V  F  P  S  L  K  F  L  Q  V  I  T  G  T  K  E  K  L  L  K  L  H  K  K  F  D  K  V  L  D  M  I  I  E  </second_frame>
            <third_frame>   K  S  K  E  D  *  H  *  I  H  F  L  I  Q  *  W  S  Y  N  F  F  L  P  L  S  S  A  Y  C  F  S  F  S  Q  *  I  Y  C  P  R  K  E  N  Q  L  *  T  C  L  Q  V  H  G  N  C  L  S  S  E  A  F  T  I  *  L  L  A  N  Y  L  T  I  L  L  E  T  W  P  K  N  M  A  P  *  C  T  C  S  S  V  R  S  L  R  L  L  F  R  V  L  V  *  H  K  R  Y  *  K  L  T  I  S  R  S  R  I  V  L  G  C  *  V  Y  R  F  *  L  T  T  I  Q  T  S  R  L  H  L  M  E  I  T  G  D  K  C  E  N  Y  A  P  W  N  Y  *  V  Q  R  M  L  Y  H  L  P  L  L  E  R  K  K  H  S  I  S  F  K  T  L  N  Q  N  L  D  Q  L  L  I  L  Q  K  R  Y  T  L  S  Q  M  Q  *  F  V  E  Q  L  L  V  R  G  E  K  K  N  Q  H  I  S  C  L  *  *  R  N  Y  H  *  *  *  Q  :  V  W  T  *  V  R  C  F  L  R  *  S  F  C  K  S  L  L  G  L  K  K  N  Y  *  S  F  I  K  S  L  T  R  C  L  T  *  *  *  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5469" stop="6150"/>
                    <exon start="6278" stop="6396"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>801</number_coding_nucleotides>
                  <number_encoded_amino_acids>267</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KIKRGLALNPFSDSIMELQLFLATFFSILLLIFTVNLLSKKRKSTLNLPPGPWKLPFIGSIHHLIASQLPHHTLRDLAKKHGPLMHLQLGEIPTIVISSPRVAQEVLKTHDLAFTNRPGLLSVQILTYNYSDIAFAPYGNYWRQMRKLCTLELLSAKNVVSFASIREEEAFDLLQDVESKSGSVINLTEKIYALTNAVICRAAFGKRRKEESTYFMSLIKELSLMITGLDISEVFPSLKFLQVITGTKEKLLKLHKKFDKVLDMIIE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="7056" PGL_stop="7587"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="7056" e_stop="7358"/>
            <exon e_start="7570" e_stop="7587"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.445" e_score="0.954"/>
          <exon-only e_score="0.611"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.954">
            <gDNA_exon_boundary e_start="7056" e_stop="7358" e_length="303"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.445">
            <gDNA_intron_boundary i_start="7359" i_stop="7569" i_length="211"/>
          </intron>
          <exon e_serial="2" e_score="0.611">
            <gDNA_exon_boundary e_start="7570" e_stop="7587" e_length="18"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7056" stop="7358"/>
              <exon start="7570" stop="7587"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355278" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAATTTCATTTGGTTTATCAAATGTTGAGCTTCCATTAGCTCAACTTATCTACCATTTCAATTGGAAGCTGCCTAACGGGATGAAGCCTGAAGATGTTGATGTTACTGAAACTCCTGGTTCTAGTTGTAGTAGAAAATATAATTTGTGTGTTATTGCTACCTCTAATGATCACGGGATTTGATAATTACAAGTGTAATTGTGGTTGTTTTTCTTTTGTTGAGAATAATGTATATTCAGTATATCTTTTTTATGATGGAAGAGTGTTTGTTTTTTTAACTGTGAACTATACTTTTATTTAGAAA : CTGAAGCCTGATGTTACT</gDNA_template>
            <first_frame> E  F  H  L  V  Y  Q  M  L  S  F  H  *  L  N  L  S  T  I  S  I  G  S  C  L  T  G  *  S  L  K  M  L  M  L  L  K  L  L  V  L  V  V  V  E  N  I  I  C  V  L  L  L  P  L  M  I  T  G  F  D  N  Y  K  C  N  C  G  C  F  S  F  V  E  N  N  V  Y  S  V  Y  L  F  Y  D  G  R  V  F  V  F  L  T  V  N  Y  T  F  I  *  K  :  L  K  P  D  V  T </first_frame>
            <second_frame>  N  F  I  W  F  I  K  C  *  A  S  I  S  S  T  Y  L  P  F  Q  L  E  A  A  *  R  D  E  A  *  R  C  *  C  Y  *  N  S  W  F  *  L  *  *  K  I  *  F  V  C  Y  C  Y  L  *  *  S  R  D  L  I  I  T  S  V  I  V  V  V  F  L  L  L  R  I  M  Y  I  Q  Y  I  F  F  M  M  E  E  C  L  F  F  *  L  *  T  I  L  L  F  R  N :   *  S  L  M  L   </second_frame>
            <third_frame>   I  S  F  G  L  S  N  V  E  L  P  L  A  Q  L  I  Y  H  F  N  W  K  L  P  N  G  M  K  P  E  D  V  D  V  T  E  T  P  G  S  S  C  S  R  K  Y  N  L  C  V  I  A  T  S  N  D  H  G  I  *  *  L  Q  V  *  L  W  L  F  F  F  C  *  E  *  C  I  F  S  I  S  F  L  *  W  K  S  V  C  F  F  N  C  E  L  Y  F  Y  L  E   : T  E  A  *  C  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7140" stop="7355"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLKMLMLLKLLVLVVVENIICVLLLPLMITGFDNYKCNCGCFSFVENNVYSVYLFYDGRVFVFLTVNYTFI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="8903" PGL_stop="8095"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8903" e_stop="8095"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="8903" e_stop="8095" e_length="809"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8903" stop="8202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732794" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8829" stop="8188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212974" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8810" stop="8283"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200054" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8809" stop="8095"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376506" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8809" stop="8257"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207825" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8805" stop="8098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E718673" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8805" stop="8312"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354219" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8726" stop="8280"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279654" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8598" stop="8097"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349787" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8598" stop="8100"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354215" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8598" stop="8157"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349898" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATTACACAAACTAAACCCAATTCTCCTCTTCTTTCATCTTATATTCTCATCATTCTGTCACACCTTATCATCATCGAATCGAACGAATCATATCAAAAGGCCCATACTTTGCCCAACGAATCAACAAAATACCCATTTTCTCCGTAAACCCATCTTCTCCAAGAACCCAAATCGGCAAGAACTCAAAATCGGAAAGCAAAAATGATGCACATGACCTTTTATTGGGGTAAAAAAGTAACCCTTTTGTTCGATTTCTGGAGAACTGATTCATGGGCTAGCTATGCAATTACTTTACTTGCTTGTTTTATCTTCGCCCTATTTTATCAGTATATGGAAGATCGTCGTCAACGATTCAGGATTATCTCTGCCAGTTTCAGGAGGAATTACCCTTCGCCGCCTAGCGCCGCTGTGAATGCTCCCCTTCTTTACACTTTCCCGACCGTCGGCGGTAAGTGGAACTCGGCGAGATTCGCTACGGCGATCGTTTTTGGGATCAATTCGGCAATTGGGTATATGCTTATGTTGGCTGTTATGTCATTCAACGGCGGCGTTTTTGTTGCTATTGTTCTGGGTTTGGCGATCGGATATTTGCTGTTCAGGATCGGCGATGAGGATGATGTCACCGTTGATAATCCTTGTGCCTGTGCTTGATAGTTAATGGGTTTGTTTGTTGTATACTGATTCAATGATAATGAAATATAATTTCCTTTTTTATGTAGCAGTATTGGATCTCTGTTGATCTTTCCTATTTCCTTTCTGTTCTGTTGTATTTCTTCATCTCAATATAATTTTACACCTTTTCTGCTTA</gDNA_template>
            <first_frame> H  Y  T  N  *  T  Q  F  S  S  S  F  I  L  Y  S  H  H  S  V  T  P  Y  H  H  R  I  E  R  I  I  S  K  G  P  Y  F  A  Q  R  I  N  K  I  P  I  F  S  V  N  P  S  S  P  R  T  Q  I  G  K  N  S  K  S  E  S  K  N  D  A  H  D  L  L  L  G  *  K  S  N  P  F  V  R  F  L  E  N  *  F  M  G  *  L  C  N  Y  F  T  C  L  F  Y  L  R  P  I  L  S  V  Y  G  R  S  S  S  T  I  Q  D  Y  L  C  Q  F  Q  E  E  L  P  F  A  A  *  R  R  C  E  C  S  P  S  L  H  F  P  D  R  R  R  *  V  E  L  G  E  I  R  Y  G  D  R  F  W  D  Q  F  G  N  W  V  Y  A  Y  V  G  C  Y  V  I  Q  R  R  R  F  C  C  Y  C  S  G  F  G  D  R  I  F  A  V  Q  D  R  R  *  G  *  C  H  R  *  *  S  L  C  L  C  L  I  V  N  G  F  V  C  C  I  L  I  Q  *  *  *  N  I  I  S  F  F  M  *  Q  Y  W  I  S  V  D  L  S  Y  F  L  S  V  L  L  Y  F  F  I  S  I  *  F  Y  T  F  S  A   </first_frame>
            <second_frame>  I  T  Q  T  K  P  N  S  P  L  L  S  S  Y  I  L  I  I  L  S  H  L  I  I  I  E  S  N  E  S  Y  Q  K  A  H  T  L  P  N  E  S  T  K  Y  P  F  S  P  *  T  H  L  L  Q  E  P  K  S  A  R  T  Q  N  R  K  A  K  M  M  H  M  T  F  Y  W  G  K  K  V  T  L  L  F  D  F  W  R  T  D  S  W  A  S  Y  A  I  T  L  L  A  C  F  I  F  A  L  F  Y  Q  Y  M  E  D  R  R  Q  R  F  R  I  I  S  A  S  F  R  R  N  Y  P  S  P  P  S  A  A  V  N  A  P  L  L  Y  T  F  P  T  V  G  G  K  W  N  S  A  R  F  A  T  A  I  V  F  G  I  N  S  A  I  G  Y  M  L  M  L  A  V  M  S  F  N  G  G  V  F  V  A  I  V  L  G  L  A  I  G  Y  L  L  F  R  I  G  D  E  D  D  V  T  V  D  N  P  C  A  C  A  *  *  L  M  G  L  F  V  V  Y  *  F  N  D  N  E  I  *  F  P  F  L  C  S  S  I  G  S  L  L  I  F  P  I  S  F  L  F  C  C  I  S  S  S  Q  Y  N  F  T  P  F  L  L  </second_frame>
            <third_frame>   L  H  K  L  N  P  I  L  L  F  F  H  L  I  F  S  S  F  C  H  T  L  S  S  S  N  R  T  N  H  I  K  R  P  I  L  C  P  T  N  Q  Q  N  T  H  F  L  R  K  P  I  F  S  K  N  P  N  R  Q  E  L  K  I  G  K  Q  K  *  C  T  *  P  F  I  G  V  K  K  *  P  F  C  S  I  S  G  E  L  I  H  G  L  A  M  Q  L  L  Y  L  L  V  L  S  S  P  Y  F  I  S  I  W  K  I  V  V  N  D  S  G  L  S  L  P  V  S  G  G  I  T  L  R  R  L  A  P  L  *  M  L  P  F  F  T  L  S  R  P  S  A  V  S  G  T  R  R  D  S  L  R  R  S  F  L  G  S  I  R  Q  L  G  I  C  L  C  W  L  L  C  H  S  T  A  A  F  L  L  L  L  F  W  V  W  R  S  D  I  C  C  S  G  S  A  M  R  M  M  S  P  L  I  I  L  V  P  V  L  D  S  *  W  V  C  L  L  Y  T  D  S  M  I  M  K  Y  N  F  L  F  Y  V  A  V  L  D  L  C  *  S  F  L  F  P  F  C  S  V  V  F  L  H  L  N  I  I  L  H  L  F  C  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8755" stop="8252"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>501</number_coding_nucleotides>
                  <number_encoded_amino_acids>167</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>THLLQEPKSARTQNRKAKMMHMTFYWGKKVTLLFDFWRTDSWASYAITLLACFIFALFYQYMEDRRQRFRIISASFRRNYPSPPSAAVNAPLLYTFPTVGGKWNSARFATAIVFGINSAIGYMLMLAVMSFNGGVFVAIVLGLAIGYLLFRIGDEDDVTVDNPCACA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="18856" PGL_stop="16666"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="18856" e_stop="18608"/>
            <exon e_start="17903" e_stop="17558"/>
            <exon e_start="17253" e_stop="16666"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="18856" e_stop="18608" e_length="249"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.999">
            <gDNA_intron_boundary i_start="18607" i_stop="17904" i_length="704"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="17903" e_stop="17558" e_length="346"/>
          </exon>
          <intron i_serial="2" don_prob="0.989" acc_prob="0.994">
            <gDNA_intron_boundary i_start="17557" i_stop="17254" i_length="304"/>
          </intron>
          <exon e_serial="3" e_score="0.996">
            <gDNA_exon_boundary e_start="17253" e_stop="16666" e_length="588"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18856" stop="18608"/>
              <exon start="17903" stop="17558"/>
              <exon start="17253" stop="17050"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542814" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18855" stop="18608"/>
              <exon start="17903" stop="17606"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301827" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17764" stop="17558"/>
              <exon start="17253" stop="16692"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542813" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17697" stop="17558"/>
              <exon start="17253" stop="16915"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310962" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16888" stop="16666"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312507" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGAAGTTCATATACCCTCCACAAATATCGTAGAATGAAGAGTTTTGTTTTCCTCACGGCGGCGTTGTTTCTGGTGGCCGCCGTGTGTGCTTCAGCATATGATGAGGACGATCTTCCTTATGACTACTACAGCAAGACCTGTCCCAAGTTGGAGTGTATAGTGCACAAGAAAATGGAGGAATGGATTAAAAAAGATTATTCACTTGCTCCTGCTCTCATGAGGTTGCATTTCCATGATTGTTTTGTTAGG : GGATGTGATGCCTCCATATTATTAGACTACGAAGGAAGTGAGAAGGATGCCAACGTAAGCAAGACATTAAGGGGATTCGAAGTAATCGAGGATATCAAACGAGAATTGGAGAAAGAGTGTCCTAAAACAGTATCCTGTGCTGATATTTTAACCGTAGCCGCAAGAGACGCCACACTTGCAGTAGGTGGTCCTTACTGGATGGTTCCATATGGCAGGAAGGATGGCACAGTTTCCAATGCTAAAGAAGCTGATCAATTAGTCCCAATGGGTCACGAAGTAGTCACTGATTTACTTGAATTATTCCAATCCAAAGGATTAAATGTTCTCGACTTGGTTGTCCTCTCTG : GAGCTCACACAATTGGAAGAACAACATGTGAATCTCTACAATACAGGTTATACAATTATAATGGGACTAAGAAATCAGATACAAGACTTGATCATCTCTACTTAAATTATTTGGAAAGAAAATGTAGATGGGCATCTGAATATGTTGATCTTGATGCTGTTACTCCAAAGAAATTTGATGTTCAATACTACAAAAATCTACAAAAGGGAATGGGACTTTTGTTGACTGATCAATTGTTGTATAAAGATTCAAGAACTGCACCAATTGTCACTGCTTTGGCTACTCAACCAGATGAATTTGGAAGCCTATTTTCAGCATCTATGGTCAAGATGGGAAATATTCAAGATTATCTTAGCAATGATGGTGAAGTCCGACTCACTTGTTCCCGTGTTAACGCCCCTACTAAATATTAATATATATTGATCGTGTAAAAGATTTAATTTCTTATGCTATCAATGCGAGTTTGTTTCTTTTTTTTTCCCGGGTTTTTACTATATTAATATTTAAATTTGTACTTTGAAGTTCGAATATTAATGAAGAGGCTGGTATGAACTTTAAAATCGTGCTAAGCTATCGATAAATTCTCTA</gDNA_template>
            <first_frame> *  S  S  Y  T  L  H  K  Y  R  R  M  K  S  F  V  F  L  T  A  A  L  F  L  V  A  A  V  C  A  S  A  Y  D  E  D  D  L  P  Y  D  Y  Y  S  K  T  C  P  K  L  E  C  I  V  H  K  K  M  E  E  W  I  K  K  D  Y  S  L  A  P  A  L  M  R  L  H  F  H  D  C  F  V  R  :  G  C  D  A  S  I  L  L  D  Y  E  G  S  E  K  D  A  N  V  S  K  T  L  R  G  F  E  V  I  E  D  I  K  R  E  L  E  K  E  C  P  K  T  V  S  C  A  D  I  L  T  V  A  A  R  D  A  T  L  A  V  G  G  P  Y  W  M  V  P  Y  G  R  K  D  G  T  V  S  N  A  K  E  A  D  Q  L  V  P  M  G  H  E  V  V  T  D  L  L  E  L  F  Q  S  K  G  L  N  V  L  D  L  V  V  L  S   : G  A  H  T  I  G  R  T  T  C  E  S  L  Q  Y  R  L  Y  N  Y  N  G  T  K  K  S  D  T  R  L  D  H  L  Y  L  N  Y  L  E  R  K  C  R  W  A  S  E  Y  V  D  L  D  A  V  T  P  K  K  F  D  V  Q  Y  Y  K  N  L  Q  K  G  M  G  L  L  L  T  D  Q  L  L  Y  K  D  S  R  T  A  P  I  V  T  A  L  A  T  Q  P  D  E  F  G  S  L  F  S  A  S  M  V  K  M  G  N  I  Q  D  Y  L  S  N  D  G  E  V  R  L  T  C  S  R  V  N  A  P  T  K  Y  *  Y  I  L  I  V  *  K  I  *  F  L  M  L  S  M  R  V  C  F  F  F  F  P  G  F  L  L  Y  *  Y  L  N  L  Y  F  E  V  R  I  L  M  K  R  L  V  *  T  L  K  S  C  *  A  I  D  K  F  S  </first_frame>
            <second_frame>  E  V  H  I  P  S  T  N  I  V  E  *  R  V  L  F  S  S  R  R  R  C  F  W  W  P  P  C  V  L  Q  H  M  M  R  T  I  F  L  M  T  T  T  A  R  P  V  P  S  W  S  V  *  C  T  R  K  W  R  N  G  L  K  K  I  I  H  L  L  L  L  S  *  G  C  I  S  M  I  V  L  L  G :   D  V  M  P  P  Y  Y  *  T  T  K  E  V  R  R  M  P  T  *  A  R  H  *  G  D  S  K  *  S  R  I  S  N  E  N  W  R  K  S  V  L  K  Q  Y  P  V  L  I  F  *  P  *  P  Q  E  T  P  H  L  Q  *  V  V  L  T  G  W  F  H  M  A  G  R  M  A  Q  F  P  M  L  K  K  L  I  N  *  S  Q  W  V  T  K  *  S  L  I  Y  L  N  Y  S  N  P  K  D  *  M  F  S  T  W  L  S  S  L  :  E  L  T  Q  L  E  E  Q  H  V  N  L  Y  N  T  G  Y  T  I  I  M  G  L  R  N  Q  I  Q  D  L  I  I  S  T  *  I  I  W  K  E  N  V  D  G  H  L  N  M  L  I  L  M  L  L  L  Q  R  N  L  M  F  N  T  T  K  I  Y  K  R  E  W  D  F  C  *  L  I  N  C  C  I  K  I  Q  E  L  H  Q  L  S  L  L  W  L  L  N  Q  M  N  L  E  A  Y  F  Q  H  L  W  S  R  W  E  I  F  K  I  I  L  A  M  M  V  K  S  D  S  L  V  P  V  L  T  P  L  L  N  I  N  I  Y  *  S  C  K  R  F  N  F  L  C  Y  Q  C  E  F  V  S  F  F  F  P  G  F  Y  Y  I  N  I  *  I  C  T  L  K  F  E  Y  *  *  R  G  W  Y  E  L  *  N  R  A  K  L  S  I  N  S  L </second_frame>
            <third_frame>   K  F  I  Y  P  P  Q  I  S  *  N  E  E  F  C  F  P  H  G  G  V  V  S  G  G  R  R  V  C  F  S  I  *  *  G  R  S  S  L  *  L  L  Q  Q  D  L  S  Q  V  G  V  Y  S  A  Q  E  N  G  G  M  D  *  K  R  L  F  T  C  S  C  S  H  E  V  A  F  P  *  L  F  C  *   : G  M  *  C  L  H  I  I  R  L  R  R  K  *  E  G  C  Q  R  K  Q  D  I  K  G  I  R  S  N  R  G  Y  Q  T  R  I  G  E  R  V  S  *  N  S  I  L  C  *  Y  F  N  R  S  R  K  R  R  H  T  C  S  R  W  S  L  L  D  G  S  I  W  Q  E  G  W  H  S  F  Q  C  *  R  S  *  S  I  S  P  N  G  S  R  S  S  H  *  F  T  *  I  I  P  I  Q  R  I  K  C  S  R  L  G  C  P  L  W :   S  S  H  N  W  K  N  N  M  *  I  S  T  I  Q  V  I  Q  L  *  W  D  *  E  I  R  Y  K  T  *  S  S  L  L  K  L  F  G  K  K  M  *  M  G  I  *  I  C  *  S  *  C  C  Y  S  K  E  I  *  C  S  I  L  Q  K  S  T  K  G  N  G  T  F  V  D  *  S  I  V  V  *  R  F  K  N  C  T  N  C  H  C  F  G  Y  S  T  R  *  I  W  K  P  I  F  S  I  Y  G  Q  D  G  K  Y  S  R  L  S  *  Q  *  W  *  S  P  T  H  L  F  P  C  *  R  P  Y  *  I  L  I  Y  I  D  R  V  K  D  L  I  S  Y  A  I  N  A  S  L  F  L  F  F  S  R  V  F  T  I  L  I  F  K  F  V  L  *  S  S  N  I  N  E  E  A  G  M  N  F  K  I  V  L  S  Y  R  *  I  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18853" stop="18608"/>
                    <exon start="17903" stop="17558"/>
                    <exon start="17253" stop="16841"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1002</number_coding_nucleotides>
                  <number_encoded_amino_acids>334</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSYTLHKYRRMKSFVFLTAALFLVAAVCASAYDEDDLPYDYYSKTCPKLECIVHKKMEEWIKKDYSLAPALMRLHFHDCFVRGCDASILLDYEGSEKDANVSKTLRGFEVIEDIKRELEKECPKTVSCADILTVAARDATLAVGGPYWMVPYGRKDGTVSNAKEADQLVPMGHEVVTDLLELFQSKGLNVLDLVVLSGAHTIGRTTCESLQYRLYNYNGTKKSDTRLDHLYLNYLERKCRWASEYVDLDAVTPKKFDVQYYKNLQKGMGLLLTDQLLYKDSRTAPIVTALATQPDEFGSLFSASMVKMGNIQDYLSNDGEVRLTCSRVNAPTKY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="24117" PGL_stop="25034"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24117" e_stop="25034"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="24117" e_stop="25034" e_length="918"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24117" stop="24727"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314140" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24555" stop="25034"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301120" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCTATATTCTCTCTCTTTATCTCCTTCATTCCTTTTTTTTTTCTTTTTTCCGTGTGGAATTTTCTGTTTGTGAAGAATGTTGATTGATTAACTTATCAAGATGAAAAAACAGAGAAATAACCGGCGAGACTTGCGTTCTCTGCGTGTTTGACGTTTTAATTACCCAAAAACAACAGAGAGGCCAGACCCCCTTTTCTTCTCTTTGAGAGAAACAAATGGGTTGTTATTTTTGATATTGTTGAATGAATGTATGTTTGGTTGTTTTTAATTCTGCTAATTTCTTCTTCAGACGAGTCAATTTTGAGAGATGGGTTGTTTTCAATTTGTAATGTTTTACTTTGGGGAACGTTGAAATGTTCAAAGTTTTCTCCTTTTTGTCAACAAACATTAAATATAGCATTCTTGATTGAGCAAGTTTCGCAAGAAATGGCATCTTCTCAGGTAGAAATTGCCTCTTCTTCTTCATTTGGTCATGTACTTAGAGATCGTAACAGGCGTGATCGATGTACTCATAGGGATTCCAATGTTTTCCAGAAGAATCTAAAAGATTTGGTCCATACACATATCCATTCTTGTATTTCTTCAAGTCAACCCACAAATACGAATACTCATTCTTCGGATGCCAATGAAAATTCCCGGCAACACCGACATGTTGATTATGCAGATTTATGGGTTCATAAACCGCAATGGGACAACAATGAGAACACTCCTACAACCGTTGATAAATGGGATAGAGAAATGGTGATTTCTTCAAGGCCAACAAAACAGAAAGGAGAAGCGCTTGAAACTACCACCGCAACCACCGTCGTCGAAGTTCCTAATTCAGGCGGTGTTTCTACTCTTGTCCGACGGTGGAGGGATTTTGAAACGGTGTCTAAGAGCGTGAATTTGGGGAACAATTCGAATTCGAATCCGAG</gDNA_template>
            <first_frame> L  Y  I  L  S  L  Y  L  L  H  S  F  F  F  S  F  F  R  V  E  F  S  V  C  E  E  C  *  L  I  N  L  S  R  *  K  N  R  E  I  T  G  E  T  C  V  L  C  V  F  D  V  L  I  T  Q  K  Q  Q  R  G  Q  T  P  F  S  S  L  *  E  K  Q  M  G  C  Y  F  *  Y  C  *  M  N  V  C  L  V  V  F  N  S  A  N  F  F  F  R  R  V  N  F  E  R  W  V  V  F  N  L  *  C  F  T  L  G  N  V  E  M  F  K  V  F  S  F  L  S  T  N  I  K  Y  S  I  L  D  *  A  S  F  A  R  N  G  I  F  S  G  R  N  C  L  F  F  F  I  W  S  C  T  *  R  S  *  Q  A  *  S  M  Y  S  *  G  F  Q  C  F  P  E  E  S  K  R  F  G  P  Y  T  Y  P  F  L  Y  F  F  K  S  T  H  K  Y  E  Y  S  F  F  G  C  Q  *  K  F  P  A  T  P  T  C  *  L  C  R  F  M  G  S  *  T  A  M  G  Q  Q  *  E  H  S  Y  N  R  *  *  M  G  *  R  N  G  D  F  F  K  A  N  K  T  E  R  R  S  A  *  N  Y  H  R  N  H  R  R  R  S  S  *  F  R  R  C  F  Y  S  C  P  T  V  E  G  F  *  N  G  V  *  E  R  E  F  G  E  Q  F  E  F  E  S  E </first_frame>
            <second_frame>  S  I  F  S  L  F  I  S  F  I  P  F  F  F  L  F  S  V  W  N  F  L  F  V  K  N  V  D  *  L  T  Y  Q  D  E  K  T  E  K  *  P  A  R  L  A  F  S  A  C  L  T  F  *  L  P  K  N  N  R  E  A  R  P  P  F  L  L  F  E  R  N  K  W  V  V  I  F  D  I  V  E  *  M  Y  V  W  L  F  L  I  L  L  I  S  S  S  D  E  S  I  L  R  D  G  L  F  S  I  C  N  V  L  L  W  G  T  L  K  C  S  K  F  S  P  F  C  Q  Q  T  L  N  I  A  F  L  I  E  Q  V  S  Q  E  M  A  S  S  Q  V  E  I  A  S  S  S  S  F  G  H  V  L  R  D  R  N  R  R  D  R  C  T  H  R  D  S  N  V  F  Q  K  N  L  K  D  L  V  H  T  H  I  H  S  C  I  S  S  S  Q  P  T  N  T  N  T  H  S  S  D  A  N  E  N  S  R  Q  H  R  H  V  D  Y  A  D  L  W  V  H  K  P  Q  W  D  N  N  E  N  T  P  T  T  V  D  K  W  D  R  E  M  V  I  S  S  R  P  T  K  Q  K  G  E  A  L  E  T  T  T  A  T  T  V  V  E  V  P  N  S  G  G  V  S  T  L  V  R  R  W  R  D  F  E  T  V  S  K  S  V  N  L  G  N  N  S  N  S  N  P   </second_frame>
            <third_frame>   L  Y  S  L  S  L  S  P  S  F  L  F  F  F  F  F  P  C  G  I  F  C  L  *  R  M  L  I  D  *  L  I  K  M  K  K  Q  R  N  N  R  R  D  L  R  S  L  R  V  *  R  F  N  Y  P  K  T  T  E  R  P  D  P  L  F  F  S  L  R  E  T  N  G  L  L  F  L  I  L  L  N  E  C  M  F  G  C  F  *  F  C  *  F  L  L  Q  T  S  Q  F  *  E  M  G  C  F  Q  F  V  M  F  Y  F  G  E  R  *  N  V  Q  S  F  L  L  F  V  N  K  H  *  I  *  H  S  *  L  S  K  F  R  K  K  W  H  L  L  R  *  K  L  P  L  L  L  H  L  V  M  Y  L  E  I  V  T  G  V  I  D  V  L  I  G  I  P  M  F  S  R  R  I  *  K  I  W  S  I  H  I  S  I  L  V  F  L  Q  V  N  P  Q  I  R  I  L  I  L  R  M  P  M  K  I  P  G  N  T  D  M  L  I  M  Q  I  Y  G  F  I  N  R  N  G  T  T  M  R  T  L  L  Q  P  L  I  N  G  I  E  K  W  *  F  L  Q  G  Q  Q  N  R  K  E  K  R  L  K  L  P  P  Q  P  P  S  S  K  F  L  I  Q  A  V  F  L  L  L  S  D  G  G  G  I  L  K  R  C  L  R  A  *  I  W  G  T  I  R  I  R  I  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24364" stop="25032"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>669</number_coding_nucleotides>
                  <number_encoded_amino_acids>223</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MYVWLFLILLISSSDESILRDGLFSICNVLLWGTLKCSKFSPFCQQTLNIAFLIEQVSQEMASSQVEIASSSSFGHVLRDRNRRDRCTHRDSNVFQKNLKDLVHTHIHSCISSSQPTNTNTHSSDANENSRQHRHVDYADLWVHKPQWDNNENTPTTVDKWDREMVISSRPTKQKGEALETTTATTVVEVPNSGGVSTLVRRWRDFETVSKSVNLGNNSNSNP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="26446" PGL_stop="30130"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="26446" e_stop="27462"/>
            <exon e_start="28085" e_stop="28577"/>
            <exon e_start="28665" e_stop="28818"/>
            <exon e_start="29174" e_stop="29267"/>
            <exon e_start="29365" e_stop="29812"/>
            <exon e_start="30113" e_stop="30130"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.989" e_score="0.992"/>
          <exon-intron don_prob="1.000" acc_prob="0.700" e_score="0.997"/>
          <exon-intron don_prob="0.710" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.563" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.383" acc_prob="0.501" e_score="1.000"/>
          <exon-only e_score="0.875"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="26446" e_stop="27462" e_length="1017"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.989">
            <gDNA_intron_boundary i_start="27463" i_stop="28084" i_length="622"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="28085" e_stop="28577" e_length="493"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.700">
            <gDNA_intron_boundary i_start="28578" i_stop="28664" i_length="87"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="28665" e_stop="28818" e_length="154"/>
          </exon>
          <intron i_serial="3" don_prob="0.710" acc_prob="0.997">
            <gDNA_intron_boundary i_start="28819" i_stop="29173" i_length="355"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="29174" e_stop="29267" e_length="94"/>
          </exon>
          <intron i_serial="4" don_prob="0.563" acc_prob="0.994">
            <gDNA_intron_boundary i_start="29268" i_stop="29364" i_length="97"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="29365" e_stop="29812" e_length="448"/>
          </exon>
          <intron i_serial="5" don_prob="0.383" acc_prob="0.501">
            <gDNA_intron_boundary i_start="29813" i_stop="30112" i_length="300"/>
          </intron>
          <exon e_serial="6" e_score="0.875">
            <gDNA_exon_boundary e_start="30113" e_stop="30130" e_length="18"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26446" stop="27074"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312920" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27011" stop="27462"/>
              <exon start="28085" stop="28228"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325292" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27212" stop="27462"/>
              <exon start="28085" stop="28316"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303160" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28238" stop="28577"/>
              <exon start="28665" stop="28818"/>
              <exon start="29174" stop="29267"/>
              <exon start="29365" stop="29530"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315096" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28238" stop="28577"/>
              <exon start="28665" stop="28818"/>
              <exon start="29174" stop="29267"/>
              <exon start="29365" stop="29524"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315130" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29179" stop="29267"/>
              <exon start="29365" stop="29812"/>
              <exon start="30113" stop="30130"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E541287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29179" stop="29267"/>
              <exon start="29365" stop="29812"/>
              <exon start="30113" stop="30120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E541290" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29180" stop="29267"/>
              <exon start="29365" stop="29812"/>
              <exon start="30113" stop="30130"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295737" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGACTCCAGAAGCCTCTCGAGAGAAGCAGCAGAGAACACCCAGGAAAACCGGAATTCCACACCAAATCAGCAAAGAGTACAGAACAAAGGTAATAATGCTGTAAAAGTTGGAAGTGAATTAGCATCCCACAAGCAAAGAGAAGGGAACCAGAAGCAGGAGATTATCAGAGAGAGTGCTGCAATGCAGCCTGGTGTAGCTGACTCAAGAAGCAATAGCAGTCCTAAATCCGAAATTGCTTCTACATCTACACGAGAGGATCATCCTGAGCCGATTGACCCAATGACTCTCTGCATAAATGTGATAGATAGCAATACACAAATTGGAAAAGTTTTTCCATCCAATCAACTGCAAGAGGAGAATCCCCATGGGGAAGTCAATAAGAAAATAAGTCCCCGAATGATGACAACAAATGTAAAAGCTACTAACTCATCAAATTCCCAGAAAGAAATGTCAATTCATATCCGACATTCTGACAGTTCTTATAGTCCGAAACATAATGAGGTAGACTGTAGTCCTCAAGCAGTTAGCCCCAGTTTACTACATTGTACTTCACAACTGCACAGCTCAGATATTCCCCATGACCAAGCTAGCTGGGAAAATGCAAGCTGTCAAGCTAACCATGACAAGTCGCTGGAATTTTTAGAGACATCAAGATCTCCCAAGGATAGTGAACAAAGTGTCCATAGAGAAGAACACGATGCAAATAAACTGCAGCATGCAGGAACTAGTAATGAGTGGTCTAGTGAGAGCACCAAACCTCAAAGTGACTGTGAAGAGGAAGCTACCAACCAAAATCTAGTGGACAGTGATTGTGGCTGGGTAAGTGATTATTCGCACACGCCAAGTGGATGGGATGAACTACAGTCTAACTACCAGCAGCAATTAGAATCCAACCAAGACTGGATAAATGATGTTTCTCGTCCACGTGAAGAGTGGGAAGGTCTTAGGCAAGAAAGATACCAAGAGATGCTTGATCCCTTCCTAGAGAATCATGATATTCGCCAACTTCTTAACAG : AAAAAGTGTTTCAATCTTTCTCAACAGTGGTTTGAGAGACAAGATAGATCAACTAATGGCGTCTCGCTCACAAGAACTACCTAATGCAAGGAGCGGCCAGCTTGAGAAAAAAGTAGGGGCACGTATGACTAAAGAATGGGGCAAGGAGGAGGAAGTGATATCACATATAGAAACACGAGCAGCCGGGGTTGATGATGATGAGGAAGAAGCGTACTCAGGTTATGAGGATGACTTTGAAGATGATAATAATCCAATTAGACAACAATACCTTAAACCTGAGGAATTAGTTGATCAGAACAAAGCTTCACACACTTTACAGTCGTGGAGAAATAATCAGGACACTTTACCATCATGGAGTAATGATCAAGACAGGGGTGTCAGTGACGACTCCTATCACCGTCCCTCTAATTCTTTACCACAGCCTGAATTATCCAACATTTACTCTCATCACAATCAACAAAGCTCCTCCACCTCCACTAGACACCCTTCAATC : GAAATGGAACTGATATATGAATTGCGAGGACACATGGAGCAACTCCACCAAGAGATTTTTGAAATACGAAGATCAATAAACAGTTGCATGAACATGCAAATGAATTTACAACATTCCATCAAGGACGAGGTTGCAGCTGCAATAATTCAGTCAG : GTCCAGTGATTGGGAGTAACTCGGATAAGAAGGGTGCAAACATAGCAAATTGCTGTATTTGTTATGAGCAGCAAGTTGATTCTCTCCTTTACAG : GTGTGGGCACATGTGCACCTGTTTCAGGTGTGCCCATGAATTGCTTTGGGGCACCGGAAAATGTCCGATATGTGAAACCCCTATTATAGATGTTGTCCGTGCATATATACACTCATGACGTACAGGTTAACCGGATTTTGTTCTGCTGATGTCTAACTTTTTGCCCAATGAGAGATGAGCCGAAAGATGATTTTTCGTTTTCTTTTCCTTCTTTTTTTGGTTTTAATTGAATCTCGTGAGCCATGGAACTGTTTTATGGCTAATTTATTTGTCTATAACAGGTTTAGATTTAGTGGATGAATGCTCACTCTCCCCTGGTTTTCACTAACCATCTTTTGTATACAATAGGAGAAAAGAAAGCAAAGTTCTTTCTATGACATTAGAAATTGTATATTTTCAAGCTCTTTGTAACAGCAATTCAAATGAAAATTGGAAGAGTTCCTTACAT : GCTTAAAATTCAAAAATA</gDNA_template>
            <first_frame> *  L  Q  K  P  L  E  R  S  S  R  E  H  P  G  K  P  E  F  H  T  K  S  A  K  S  T  E  Q  R  *  *  C  C  K  S  W  K  *  I  S  I  P  Q  A  K  R  R  E  P  E  A  G  D  Y  Q  R  E  C  C  N  A  A  W  C  S  *  L  K  K  Q  *  Q  S  *  I  R  N  C  F  Y  I  Y  T  R  G  S  S  *  A  D  *  P  N  D  S  L  H  K  C  D  R  *  Q  Y  T  N  W  K  S  F  S  I  Q  S  T  A  R  G  E  S  P  W  G  S  Q  *  E  N  K  S  P  N  D  D  N  K  C  K  S  Y  *  L  I  K  F  P  E  R  N  V  N  S  Y  P  T  F  *  Q  F  L  *  S  E  T  *  *  G  R  L  *  S  S  S  S  *  P  Q  F  T  T  L  Y  F  T  T  A  Q  L  R  Y  S  P  *  P  S  *  L  G  K  C  K  L  S  S  *  P  *  Q  V  A  G  I  F  R  D  I  K  I  S  Q  G  *  *  T  K  C  P  *  R  R  T  R  C  K  *  T  A  A  C  R  N  *  *  *  V  V  *  *  E  H  Q  T  S  K  *  L  *  R  G  S  Y  Q  P  K  S  S  G  Q  *  L  W  L  G  K  *  L  F  A  H  A  K  W  M  G  *  T  T  V  *  L  P  A  A  I  R  I  Q  P  R  L  D  K  *  C  F  S  S  T  *  R  V  G  R  S  *  A  R  K  I  P  R  D  A  *  S  L  P  R  E  S  *  Y  S  P  T  S  *  Q  :  K  K  C  F  N  L  S  Q  Q  W  F  E  R  Q  D  R  S  T  N  G  V  S  L  T  R  T  T  *  C  K  E  R  P  A  *  E  K  S  R  G  T  Y  D  *  R  M  G  Q  G  G  G  S  D  I  T  Y  R  N  T  S  S  R  G  *  *  *  *  G  R  S  V  L  R  L  *  G  *  L  *  R  *  *  *  S  N  *  T  T  I  P  *  T  *  G  I  S  *  S  E  Q  S  F  T  H  F  T  V  V  E  K  *  S  G  H  F  T  I  M  E  *  *  S  R  Q  G  C  Q  *  R  L  L  S  P  S  L  *  F  F  T  T  A  *  I  I  Q  H  L  L  S  S  Q  S  T  K  L  L  H  L  H  *  T  P  F  N   : R  N  G  T  D  I  *  I  A  R  T  H  G  A  T  P  P  R  D  F  *  N  T  K  I  N  K  Q  L  H  E  H  A  N  E  F  T  T  F  H  Q  G  R  G  C  S  C  N  N  S  V  R :   S  S  D  W  E  *  L  G  *  E  G  C  K  H  S  K  L  L  Y  L  L  *  A  A  S  *  F  S  P  L  Q  :  V  W  A  H  V  H  L  F  Q  V  C  P  *  I  A  L  G  H  R  K  M  S  D  M  *  N  P  Y  Y  R  C  C  P  C  I  Y  T  L  M  T  Y  R  L  T  G  F  C  S  A  D  V  *  L  F  A  Q  *  E  M  S  R  K  M  I  F  R  F  L  F  L  L  F  L  V  L  I  E  S  R  E  P  W  N  C  F  M  A  N  L  F  V  Y  N  R  F  R  F  S  G  *  M  L  T  L  P  W  F  S  L  T  I  F  C  I  Q  *  E  K  R  K  Q  S  S  F  Y  D  I  R  N  C  I  F  S  S  S  L  *  Q  Q  F  K  *  K  L  E  E  F  L  T   : C  L  K  F  K  N  </first_frame>
            <second_frame>  D  S  R  S  L  S  R  E  A  A  E  N  T  Q  E  N  R  N  S  T  P  N  Q  Q  R  V  Q  N  K  G  N  N  A  V  K  V  G  S  E  L  A  S  H  K  Q  R  E  G  N  Q  K  Q  E  I  I  R  E  S  A  A  M  Q  P  G  V  A  D  S  R  S  N  S  S  P  K  S  E  I  A  S  T  S  T  R  E  D  H  P  E  P  I  D  P  M  T  L  C  I  N  V  I  D  S  N  T  Q  I  G  K  V  F  P  S  N  Q  L  Q  E  E  N  P  H  G  E  V  N  K  K  I  S  P  R  M  M  T  T  N  V  K  A  T  N  S  S  N  S  Q  K  E  M  S  I  H  I  R  H  S  D  S  S  Y  S  P  K  H  N  E  V  D  C  S  P  Q  A  V  S  P  S  L  L  H  C  T  S  Q  L  H  S  S  D  I  P  H  D  Q  A  S  W  E  N  A  S  C  Q  A  N  H  D  K  S  L  E  F  L  E  T  S  R  S  P  K  D  S  E  Q  S  V  H  R  E  E  H  D  A  N  K  L  Q  H  A  G  T  S  N  E  W  S  S  E  S  T  K  P  Q  S  D  C  E  E  E  A  T  N  Q  N  L  V  D  S  D  C  G  W  V  S  D  Y  S  H  T  P  S  G  W  D  E  L  Q  S  N  Y  Q  Q  Q  L  E  S  N  Q  D  W  I  N  D  V  S  R  P  R  E  E  W  E  G  L  R  Q  E  R  Y  Q  E  M  L  D  P  F  L  E  N  H  D  I  R  Q  L  L  N  R :   K  S  V  S  I  F  L  N  S  G  L  R  D  K  I  D  Q  L  M  A  S  R  S  Q  E  L  P  N  A  R  S  G  Q  L  E  K  K  V  G  A  R  M  T  K  E  W  G  K  E  E  E  V  I  S  H  I  E  T  R  A  A  G  V  D  D  D  E  E  E  A  Y  S  G  Y  E  D  D  F  E  D  D  N  N  P  I  R  Q  Q  Y  L  K  P  E  E  L  V  D  Q  N  K  A  S  H  T  L  Q  S  W  R  N  N  Q  D  T  L  P  S  W  S  N  D  Q  D  R  G  V  S  D  D  S  Y  H  R  P  S  N  S  L  P  Q  P  E  L  S  N  I  Y  S  H  H  N  Q  Q  S  S  S  T  S  T  R  H  P  S  I  :  E  M  E  L  I  Y  E  L  R  G  H  M  E  Q  L  H  Q  E  I  F  E  I  R  R  S  I  N  S  C  M  N  M  Q  M  N  L  Q  H  S  I  K  D  E  V  A  A  A  I  I  Q  S   : G  P  V  I  G  S  N  S  D  K  K  G  A  N  I  A  N  C  C  I  C  Y  E  Q  Q  V  D  S  L  L  Y  R :   C  G  H  M  C  T  C  F  R  C  A  H  E  L  L  W  G  T  G  K  C  P  I  C  E  T  P  I  I  D  V  V  R  A  Y  I  H  S  *  R  T  G  *  P  D  F  V  L  L  M  S  N  F  L  P  N  E  R  *  A  E  R  *  F  F  V  F  F  S  F  F  F  W  F  *  L  N  L  V  S  H  G  T  V  L  W  L  I  Y  L  S  I  T  G  L  D  L  V  D  E  C  S  L  S  P  G  F  H  *  P  S  F  V  Y  N  R  R  K  E  S  K  V  L  S  M  T  L  E  I  V  Y  F  Q  A  L  C  N  S  N  S  N  E  N  W  K  S  S  L  H  :  A  *  N  S  K  I </second_frame>
            <third_frame>   T  P  E  A  S  R  E  K  Q  Q  R  T  P  R  K  T  G  I  P  H  Q  I  S  K  E  Y  R  T  K  V  I  M  L  *  K  L  E  V  N  *  H  P  T  S  K  E  K  G  T  R  S  R  R  L  S  E  R  V  L  Q  C  S  L  V  *  L  T  Q  E  A  I  A  V  L  N  P  K  L  L  L  H  L  H  E  R  I  I  L  S  R  L  T  Q  *  L  S  A  *  M  *  *  I  A  I  H  K  L  E  K  F  F  H  P  I  N  C  K  R  R  I  P  M  G  K  S  I  R  K  *  V  P  E  *  *  Q  Q  M  *  K  L  L  T  H  Q  I  P  R  K  K  C  Q  F  I  S  D  I  L  T  V  L  I  V  R  N  I  M  R  *  T  V  V  L  K  Q  L  A  P  V  Y  Y  I  V  L  H  N  C  T  A  Q  I  F  P  M  T  K  L  A  G  K  M  Q  A  V  K  L  T  M  T  S  R  W  N  F  *  R  H  Q  D  L  P  R  I  V  N  K  V  S  I  E  K  N  T  M  Q  I  N  C  S  M  Q  E  L  V  M  S  G  L  V  R  A  P  N  L  K  V  T  V  K  R  K  L  P  T  K  I  *  W  T  V  I  V  A  G  *  V  I  I  R  T  R  Q  V  D  G  M  N  Y  S  L  T  T  S  S  N  *  N  P  T  K  T  G  *  M  M  F  L  V  H  V  K  S  G  K  V  L  G  K  K  D  T  K  R  C  L  I  P  S  *  R  I  M  I  F  A  N  F  L  T   : E  K  V  F  Q  S  F  S  T  V  V  *  E  T  R  *  I  N  *  W  R  L  A  H  K  N  Y  L  M  Q  G  A  A  S  L  R  K  K  *  G  H  V  *  L  K  N  G  A  R  R  R  K  *  Y  H  I  *  K  H  E  Q  P  G  L  M  M  M  R  K  K  R  T  Q  V  M  R  M  T  L  K  M  I  I  I  Q  L  D  N  N  T  L  N  L  R  N  *  L  I  R  T  K  L  H  T  L  Y  S  R  G  E  I  I  R  T  L  Y  H  H  G  V  M  I  K  T  G  V  S  V  T  T  P  I  T  V  P  L  I  L  Y  H  S  L  N  Y  P  T  F  T  L  I  T  I  N  K  A  P  P  P  P  L  D  T  L  Q  S :   K  W  N  *  Y  M  N  C  E  D  T  W  S  N  S  T  K  R  F  L  K  Y  E  D  Q  *  T  V  A  *  T  C  K  *  I  Y  N  I  P  S  R  T  R  L  Q  L  Q  *  F  S  Q  :  V  Q  *  L  G  V  T  R  I  R  R  V  Q  T  *  Q  I  A  V  F  V  M  S  S  K  L  I  L  S  F  T   : G  V  G  T  C  A  P  V  S  G  V  P  M  N  C  F  G  A  P  E  N  V  R  Y  V  K  P  L  L  *  M  L  S  V  H  I  Y  T  H  D  V  Q  V  N  R  I  L  F  C  *  C  L  T  F  C  P  M  R  D  E  P  K  D  D  F  S  F  S  F  P  S  F  F  G  F  N  *  I  S  *  A  M  E  L  F  Y  G  *  F  I  C  L  *  Q  V  *  I  *  W  M  N  A  H  S  P  L  V  F  T  N  H  L  L  Y  T  I  G  E  K  K  A  K  F  F  L  *  H  *  K  L  Y  I  F  K  L  F  V  T  A  I  Q  M  K  I  G  R  V  P  Y  M :   L  K  I  Q  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26447" stop="27462"/>
                    <exon start="28085" stop="28577"/>
                    <exon start="28665" stop="28818"/>
                    <exon start="29174" stop="29267"/>
                    <exon start="29365" stop="29482"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1872</number_coding_nucleotides>
                  <number_encoded_amino_acids>624</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DSRSLSREAAENTQENRNSTPNQQRVQNKGNNAVKVGSELASHKQREGNQKQEIIRESAAMQPGVADSRSNSSPKSEIASTSTREDHPEPIDPMTLCINVIDSNTQIGKVFPSNQLQEENPHGEVNKKISPRMMTTNVKATNSSNSQKEMSIHIRHSDSSYSPKHNEVDCSPQAVSPSLLHCTSQLHSSDIPHDQASWENASCQANHDKSLEFLETSRSPKDSEQSVHREEHDANKLQHAGTSNEWSSESTKPQSDCEEEATNQNLVDSDCGWVSDYSHTPSGWDELQSNYQQQLESNQDWINDVSRPREEWEGLRQERYQEMLDPFLENHDIRQLLNRKSVSIFLNSGLRDKIDQLMASRSQELPNARSGQLEKKVGARMTKEWGKEEEVISHIETRAAGVDDDEEEAYSGYEDDFEDDNNPIRQQYLKPEELVDQNKASHTLQSWRNNQDTLPSWSNDQDRGVSDDSYHRPSNSLPQPELSNIYSHHNQQSSSTSTRHPSIEMELIYELRGHMEQLHQEIFEIRRSINSCMNMQMNLQHSIKDEVAAAIIQSGPVIGSNSDKKGANIANCCICYEQQVDSLLYRCGHMCTCFRCAHELLWGTGKCPICETPIIDVVRAYIHS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="32716" PGL_stop="29950"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="32716" e_stop="32414"/>
            <exon e_start="31934" e_stop="31773"/>
            <exon e_start="30350" e_stop="29950"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.950" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="32716" e_stop="32414" e_length="303"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.983">
            <gDNA_intron_boundary i_start="32413" i_stop="31935" i_length="479"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="31934" e_stop="31773" e_length="162"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.950">
            <gDNA_intron_boundary i_start="31772" i_stop="30351" i_length="1422"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="30350" e_stop="29950" e_length="401"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32716" stop="32414"/>
              <exon start="31934" stop="31773"/>
              <exon start="30350" stop="30069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377961" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32470" stop="32414"/>
              <exon start="31934" stop="31773"/>
              <exon start="30350" stop="29950"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377962" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32456" stop="32414"/>
              <exon start="31934" stop="31773"/>
              <exon start="30350" stop="29950"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542209" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31903" stop="31773"/>
              <exon start="30350" stop="29950"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233157" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31850" stop="31773"/>
              <exon start="30350" stop="29950"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237845" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCTGTAAGGACTATAAAGAGACTGGATATTGTGGATATGGGGACTCCTGCAAATTTATGCATGACCGTGGAGATTATAAGTCTGGGTGGCAGATGGAAAGGGAGTGGGATGAAGCTGAGAAAGAGAGGAAAAGAAAATTGGCTCTGGGAATGCTCAATGAAGACGATGAGGATGCAGAGAAGAGTGATGAAGATGACGACGATGATGCATTACCATTTGCTTGTTTTATCTGCAGAGAGCCTTTTGTTGATCCTGTTATGACCAAATGCAAACACTACTTCTGTGAGCACTGTGCATTAAAG : CACCATGCAAAGAATAAGAAGTGCTATGTATGCAACCAACCAACCCTTGGGATATTCAATACAGCATTTGAAATACGCAAGAGGATGGCGGCTCAAGGGAAATGATGGATTTTCTGCCAGTTCTCTCTTTCACGATGCCATAGAAGTGGATCTTGCTTTACT : GTTGAATGATGATTATGATTCAAGTAACAGGTTGTGATTGATGTATGATAAGGAAGTTTGAAACAATACCAACGCTGGTGGAAGATGAAGATTAGGACATTGACTTGAACGTCCAATATCACTTCATGTGAAGAGTCGATATATATTTTCTTATGTAAGTACGGCAACTTATATGGAATTAGGTTATGTGTCTTTCCTTTGCTTTGTTGCCTTAGTCATGTATTTTTGAATTTTAAGCCTACATGATGAATCACTTCAGTTGCTCGTCTATCTGTCTCAGCTAGATATCATATCTTTTTGCTGGTTTGAATTACTATGAAGGGACTAAAATTGTAAGCTTTAGCAACCAACCTTCTAACTTCTATATTTGGTCACAATGGAAATGACATTACTCTTTTCAA</gDNA_template>
            <first_frame> I  C  K  D  Y  K  E  T  G  Y  C  G  Y  G  D  S  C  K  F  M  H  D  R  G  D  Y  K  S  G  W  Q  M  E  R  E  W  D  E  A  E  K  E  R  K  R  K  L  A  L  G  M  L  N  E  D  D  E  D  A  E  K  S  D  E  D  D  D  D  D  A  L  P  F  A  C  F  I  C  R  E  P  F  V  D  P  V  M  T  K  C  K  H  Y  F  C  E  H  C  A  L  K  :  H  H  A  K  N  K  K  C  Y  V  C  N  Q  P  T  L  G  I  F  N  T  A  F  E  I  R  K  R  M  A  A  Q  G  K  *  W  I  F  C  Q  F  S  L  S  R  C  H  R  S  G  S  C  F  T  :  V  E  *  *  L  *  F  K  *  Q  V  V  I  D  V  *  *  G  S  L  K  Q  Y  Q  R  W  W  K  M  K  I  R  T  L  T  *  T  S  N  I  T  S  C  E  E  S  I  Y  I  F  L  C  K  Y  G  N  L  Y  G  I  R  L  C  V  F  P  L  L  C  C  L  S  H  V  F  L  N  F  K  P  T  *  *  I  T  S  V  A  R  L  S  V  S  A  R  Y  H  I  F  L  L  V  *  I  T  M  K  G  L  K  L  *  A  L  A  T  N  L  L  T  S  I  F  G  H  N  G  N  D  I  T  L  F   </first_frame>
            <second_frame>  S  V  R  T  I  K  R  L  D  I  V  D  M  G  T  P  A  N  L  C  M  T  V  E  I  I  S  L  G  G  R  W  K  G  S  G  M  K  L  R  K  R  G  K  E  N  W  L  W  E  C  S  M  K  T  M  R  M  Q  R  R  V  M  K  M  T  T  M  M  H  Y  H  L  L  V  L  S  A  E  S  L  L  L  I  L  L  *  P  N  A  N  T  T  S  V  S  T  V  H  *  S :   T  M  Q  R  I  R  S  A  M  Y  A  T  N  Q  P  L  G  Y  S  I  Q  H  L  K  Y  A  R  G  W  R  L  K  G  N  D  G  F  S  A  S  S  L  F  H  D  A  I  E  V  D  L  A  L  L :   L  N  D  D  Y  D  S  S  N  R  L  *  L  M  Y  D  K  E  V  *  N  N  T  N  A  G  G  R  *  R  L  G  H  *  L  E  R  P  I  S  L  H  V  K  S  R  Y  I  F  S  Y  V  S  T  A  T  Y  M  E  L  G  Y  V  S  F  L  C  F  V  A  L  V  M  Y  F  *  I  L  S  L  H  D  E  S  L  Q  L  L  V  Y  L  S  Q  L  D  I  I  S  F  C  W  F  E  L  L  *  R  D  *  N  C  K  L  *  Q  P  T  F  *  L  L  Y  L  V  T  M  E  M  T  L  L  F  S  </second_frame>
            <third_frame>   L  *  G  L  *  R  D  W  I  L  W  I  W  G  L  L  Q  I  Y  A  *  P  W  R  L  *  V  W  V  A  D  G  K  G  V  G  *  S  *  E  R  E  E  K  K  I  G  S  G  N  A  Q  *  R  R  *  G  C  R  E  E  *  *  R  *  R  R  *  C  I  T  I  C  L  F  Y  L  Q  R  A  F  C  *  S  C  Y  D  Q  M  Q  T  L  L  L  *  A  L  C  I  K   : A  P  C  K  E  *  E  V  L  C  M  Q  P  T  N  P  W  D  I  Q  Y  S  I  *  N  T  Q  E  D  G  G  S  R  E  M  M  D  F  L  P  V  L  S  F  T  M  P  *  K  W  I  L  L  Y   : C  *  M  M  I  M  I  Q  V  T  G  C  D  *  C  M  I  R  K  F  E  T  I  P  T  L  V  E  D  E  D  *  D  I  D  L  N  V  Q  Y  H  F  M  *  R  V  D  I  Y  F  L  M  *  V  R  Q  L  I  W  N  *  V  M  C  L  S  F  A  L  L  P  *  S  C  I  F  E  F  *  A  Y  M  M  N  H  F  S  C  S  S  I  C  L  S  *  I  S  Y  L  F  A  G  L  N  Y  Y  E  G  T  K  I  V  S  F  S  N  Q  P  S  N  F  Y  I  W  S  Q  W  K  *  H  Y  S  F  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32716" stop="32414"/>
                    <exon start="31934" stop="31830"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>405</number_coding_nucleotides>
                  <number_encoded_amino_acids>135</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ICKDYKETGYCGYGDSCKFMHDRGDYKSGWQMEREWDEAEKERKRKLALGMLNEDDEDAEKSDEDDDDDALPFACFICREPFVDPVMTKCKHYFCEHCALKHHAKNKKCYVCNQPTLGIFNTAFEIRKRMAAQGK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="35498" PGL_stop="32821"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="35498" e_stop="35359"/>
            <exon e_start="34697" e_stop="34606"/>
            <exon e_start="34487" e_stop="34412"/>
            <exon e_start="33249" e_stop="32823"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.424" e_score="0.971"/>
          <exon-intron don_prob="0.921" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.971">
            <gDNA_exon_boundary e_start="35498" e_stop="35359" e_length="140"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.424">
            <gDNA_intron_boundary i_start="35358" i_stop="34698" i_length="661"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="34697" e_stop="34606" e_length="92"/>
          </exon>
          <intron i_serial="2" don_prob="0.921" acc_prob="0.998">
            <gDNA_intron_boundary i_start="34605" i_stop="34488" i_length="118"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="34487" e_stop="34412" e_length="76"/>
          </exon>
          <intron i_serial="3" don_prob="0.986" acc_prob="0.992">
            <gDNA_intron_boundary i_start="34411" i_stop="33250" i_length="1162"/>
          </intron>
          <exon e_serial="4" e_score="0.986">
            <gDNA_exon_boundary e_start="33249" e_stop="32823" e_length="427"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35498" stop="35359"/>
              <exon start="34697" stop="34606"/>
              <exon start="34487" stop="34412"/>
              <exon start="33249" stop="32823"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542212" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35498" stop="35359"/>
              <exon start="34697" stop="34606"/>
              <exon start="34487" stop="34412"/>
              <exon start="33249" stop="33169"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298050" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTCGAAAAAAAACCCTCTTGCCACCGGTTCGCCACCGCCTGCGGCAAATCCGCCTCTCTTGTCGCCGTGAAGTTTCCTGCCTGCGGTGTTTGGTTGTCTTCGATCTCAAACTCTCGATTATACCGTCTGCTCTTTTATTG : CAGTGTGGCACCTGGAATCTCTAAATTCTGAAGCCTCTCTTTGACCGACTTTGGTGAAATACTCGTCTCTTTCTCAAAGTAAAATCTGAGTT : ATGGAGAATTCAAATACTCCAGCATCTGATTCGAACGCTGCCAAAGCTGAAGCTGAACAGCTGCCAACAGCTCCCG : TATGCAATTTTTTCAAAAAACCATCCAAGGGAAAAAATATCAGAAAGCGTCCTACAGTTGAAGAGGGAGAGAATGAAGATGCAGAAGGAGATAGTTCAGTCATATATACCAAGAAAAAGCCAGCGGTTGCGAATAATAAGCTGCACTTCTCAACTGGACCTTCAAAGTCCAACAAGGATACTGACTCCAATGTAGATTCAAAAGCGGCTCGTTTTCATTTCGAGTCCTCAAAGGAAATTCAAGTTCAAAATGATAGTAGAGCAACAGCTACTTTAGAAACTGAGACTGAGTTCTCTAGAGATGCCCGGGCCATTCGAGAAAAAGCTCTGAAGCAGGCAGAGGAGGCTTTAAAGGGAAAAAGCAAGACAGGTGGTGATGACAAATTGTATAAAGGTATGAATCAATATACTGATTACAAAGCTGGTTT</gDNA_template>
            <first_frame> V  E  K  K  P  S  C  H  R  F  A  T  A  C  G  K  S  A  S  L  V  A  V  K  F  P  A  C  G  V  W  L  S  S  I  S  N  S  R  L  Y  R  L  L  F  Y  C :   S  V  A  P  G  I  S  K  F  *  S  L  S  L  T  D  F  G  E  I  L  V  S  F  S  K  *  N  L  S   : Y  G  E  F  K  Y  S  S  I  *  F  E  R  C  Q  S  *  S  *  T  A  A  N  S  S  R :   M  Q  F  F  Q  K  T  I  Q  G  K  K  Y  Q  K  A  S  Y  S  *  R  G  R  E  *  R  C  R  R  R  *  F  S  H  I  Y  Q  E  K  A  S  G  C  E  *  *  A  A  L  L  N  W  T  F  K  V  Q  Q  G  Y  *  L  Q  C  R  F  K  S  G  S  F  S  F  R  V  L  K  G  N  S  S  S  K  *  *  *  S  N  S  Y  F  R  N  *  D  *  V  L  *  R  C  P  G  H  S  R  K  S  S  E  A  G  R  G  G  F  K  G  K  K  Q  D  R  W  *  *  Q  I  V  *  R  Y  E  S  I  Y  *  L  Q  S  W  F </first_frame>
            <second_frame>  S  K  K  N  P  L  A  T  G  S  P  P  P  A  A  N  P  P  L  L  S  P  *  S  F  L  P  A  V  F  G  C  L  R  S  Q  T  L  D  Y  T  V  C  S  F  I   : A  V  W  H  L  E  S  L  N  S  E  A  S  L  *  P  T  L  V  K  Y  S  S  L  S  Q  S  K  I  *  V  :  M  E  N  S  N  T  P  A  S  D  S  N  A  A  K  A  E  A  E  Q  L  P  T  A  P   : V  C  N  F  F  K  K  P  S  K  G  K  N  I  R  K  R  P  T  V  E  E  G  E  N  E  D  A  E  G  D  S  S  V  I  Y  T  K  K  K  P  A  V  A  N  N  K  L  H  F  S  T  G  P  S  K  S  N  K  D  T  D  S  N  V  D  S  K  A  A  R  F  H  F  E  S  S  K  E  I  Q  V  Q  N  D  S  R  A  T  A  T  L  E  T  E  T  E  F  S  R  D  A  R  A  I  R  E  K  A  L  K  Q  A  E  E  A  L  K  G  K  S  K  T  G  G  D  D  K  L  Y  K  G  M  N  Q  Y  T  D  Y  K  A  G   </second_frame>
            <third_frame>   R  K  K  T  L  L  P  P  V  R  H  R  L  R  Q  I  R  L  S  C  R  R  E  V  S  C  L  R  C  L  V  V  F  D  L  K  L  S  I  I  P  S  A  L  L  L  :  Q  C  G  T  W  N  L  *  I  L  K  P  L  F  D  R  L  W  *  N  T  R  L  F  L  K  V  K  S  E  L :   W  R  I  Q  I  L  Q  H  L  I  R  T  L  P  K  L  K  L  N  S  C  Q  Q  L  P  :  Y  A  I  F  S  K  N  H  P  R  E  K  I  S  E  S  V  L  Q  L  K  R  E  R  M  K  M  Q  K  E  I  V  Q  S  Y  I  P  R  K  S  Q  R  L  R  I  I  S  C  T  S  Q  L  D  L  Q  S  P  T  R  I  L  T  P  M  *  I  Q  K  R  L  V  F  I  S  S  P  Q  R  K  F  K  F  K  M  I  V  E  Q  Q  L  L  *  K  L  R  L  S  S  L  E  M  P  G  P  F  E  K  K  L  *  S  R  Q  R  R  L  *  R  E  K  A  R  Q  V  V  M  T  N  C  I  K  V  *  I  N  I  L  I  T  K  L  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34608" stop="34606"/>
                    <exon start="34487" stop="34412"/>
                    <exon start="33249" stop="32825"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>504</number_coding_nucleotides>
                  <number_encoded_amino_acids>168</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VMENSNTPASDSNAAKAEAEQLPTAPVCNFFKKPSKGKNIRKRPTVEEGENEDAEGDSSVIYTKKKPAVANNKLHFSTGPSKSNKDTDSNVDSKAARFHFESSKEIQVQNDSRATATLETETEFSRDARAIREKALKQAEEALKGKSKTGGDDKLYKGMNQYTDYKAG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="35493" e_stop="35359"/>
            <exon e_start="34694" e_stop="34606"/>
            <exon e_start="34487" e_stop="34412"/>
            <exon e_start="33249" e_stop="32821"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.824" e_score="0.926"/>
          <exon-intron don_prob="0.921" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.926">
            <gDNA_exon_boundary e_start="35493" e_stop="35359" e_length="135"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.824">
            <gDNA_intron_boundary i_start="35358" i_stop="34695" i_length="664"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="34694" e_stop="34606" e_length="89"/>
          </exon>
          <intron i_serial="2" don_prob="0.921" acc_prob="0.998">
            <gDNA_intron_boundary i_start="34605" i_stop="34488" i_length="118"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="34487" e_stop="34412" e_length="76"/>
          </exon>
          <intron i_serial="3" don_prob="0.986" acc_prob="0.992">
            <gDNA_intron_boundary i_start="34411" i_stop="33250" i_length="1162"/>
          </intron>
          <exon e_serial="4" e_score="0.979">
            <gDNA_exon_boundary e_start="33249" e_stop="32821" e_length="429"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35493" stop="35359"/>
              <exon start="34694" stop="34606"/>
              <exon start="34487" stop="34412"/>
              <exon start="33249" stop="32821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E687754" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAAAACCCTCTTGCCACCGGTTCGCCACCGCCTGCGGCAAATCCGCCTCTCTTGTCGCCGTGAAGTTTCCTGCCTGCGGTGTTTGGTTGTCTTCGATCTCAAACTCTCGATTATACCGTCTGCTCTTTTATTG : TGTGGCACCTGGAATCTCTAAATTCTGAAGCCTCTCTTTGACCGACTTTGGTGAAATACTCGTCTCTTTCTCAAAGTAAAATCTGAGTT : ATGGAGAATTCAAATACTCCAGCATCTGATTCGAACGCTGCCAAAGCTGAAGCTGAACAGCTGCCAACAGCTCCCG : TATGCAATTTTTTCAAAAAACCATCCAAGGGAAAAAATATCAGAAAGCGTCCTACAGTTGAAGAGGGAGAGAATGAAGATGCAGAAGGAGATAGTTCAGTCATATATACCAAGAAAAAGCCAGCGGTTGCGAATAATAAGCTGCACTTCTCAACTGGACCTTCAAAGTCCAACAAGGATACTGACTCCAATGTAGATTCAAAAGCGGCTCGTTTTCATTTCGAGTCCTCAAAGGAAATTCAAGTTCAAAATGATAGTAGAGCAACAGCTACTTTAGAAACTGAGACTGAGTTCTCTAGAGATGCCCGGGCCATTCGAGAAAAAGCTCTGAAGCAGGCAGAGGAGGCTTTAAAGGGAAAAAGCAAGACAGGTGGTGATGACAAATTGTATAAAGGTATGAATCAATATACTGATTACAAAGCTGGTTTGA</gDNA_template>
            <first_frame> K  K  T  L  L  P  P  V  R  H  R  L  R  Q  I  R  L  S  C  R  R  E  V  S  C  L  R  C  L  V  V  F  D  L  K  L  S  I  I  P  S  A  L  L  L  :  C  G  T  W  N  L  *  I  L  K  P  L  F  D  R  L  W  *  N  T  R  L  F  L  K  V  K  S  E  L :   W  R  I  Q  I  L  Q  H  L  I  R  T  L  P  K  L  K  L  N  S  C  Q  Q  L  P  :  Y  A  I  F  S  K  N  H  P  R  E  K  I  S  E  S  V  L  Q  L  K  R  E  R  M  K  M  Q  K  E  I  V  Q  S  Y  I  P  R  K  S  Q  R  L  R  I  I  S  C  T  S  Q  L  D  L  Q  S  P  T  R  I  L  T  P  M  *  I  Q  K  R  L  V  F  I  S  S  P  Q  R  K  F  K  F  K  M  I  V  E  Q  Q  L  L  *  K  L  R  L  S  S  L  E  M  P  G  P  F  E  K  K  L  *  S  R  Q  R  R  L  *  R  E  K  A  R  Q  V  V  M  T  N  C  I  K  V  *  I  N  I  L  I  T  K  L  V  * </first_frame>
            <second_frame>  K  K  P  S  C  H  R  F  A  T  A  C  G  K  S  A  S  L  V  A  V  K  F  P  A  C  G  V  W  L  S  S  I  S  N  S  R  L  Y  R  L  L  F  Y  C :   V  A  P  G  I  S  K  F  *  S  L  S  L  T  D  F  G  E  I  L  V  S  F  S  K  *  N  L  S   : Y  G  E  F  K  Y  S  S  I  *  F  E  R  C  Q  S  *  S  *  T  A  A  N  S  S  R :   M  Q  F  F  Q  K  T  I  Q  G  K  K  Y  Q  K  A  S  Y  S  *  R  G  R  E  *  R  C  R  R  R  *  F  S  H  I  Y  Q  E  K  A  S  G  C  E  *  *  A  A  L  L  N  W  T  F  K  V  Q  Q  G  Y  *  L  Q  C  R  F  K  S  G  S  F  S  F  R  V  L  K  G  N  S  S  S  K  *  *  *  S  N  S  Y  F  R  N  *  D  *  V  L  *  R  C  P  G  H  S  R  K  S  S  E  A  G  R  G  G  F  K  G  K  K  Q  D  R  W  *  *  Q  I  V  *  R  Y  E  S  I  Y  *  L  Q  S  W  F   </second_frame>
            <third_frame>   K  N  P  L  A  T  G  S  P  P  P  A  A  N  P  P  L  L  S  P  *  S  F  L  P  A  V  F  G  C  L  R  S  Q  T  L  D  Y  T  V  C  S  F  I   : V  W  H  L  E  S  L  N  S  E  A  S  L  *  P  T  L  V  K  Y  S  S  L  S  Q  S  K  I  *  V  :  M  E  N  S  N  T  P  A  S  D  S  N  A  A  K  A  E  A  E  Q  L  P  T  A  P   : V  C  N  F  F  K  K  P  S  K  G  K  N  I  R  K  R  P  T  V  E  E  G  E  N  E  D  A  E  G  D  S  S  V  I  Y  T  K  K  K  P  A  V  A  N  N  K  L  H  F  S  T  G  P  S  K  S  N  K  D  T  D  S  N  V  D  S  K  A  A  R  F  H  F  E  S  S  K  E  I  Q  V  Q  N  D  S  R  A  T  A  T  L  E  T  E  T  E  F  S  R  D  A  R  A  I  R  E  K  A  L  K  Q  A  E  E  A  L  K  G  K  S  K  T  G  G  D  D  K  L  Y  K  G  M  N  Q  Y  T  D  Y  K  A  G  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34608" stop="34606"/>
                    <exon start="34487" stop="34412"/>
                    <exon start="33249" stop="32822"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>507</number_coding_nucleotides>
                  <number_encoded_amino_acids>169</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VMENSNTPASDSNAAKAEAEQLPTAPVCNFFKKPSKGKNIRKRPTVEEGENEDAEGDSSVIYTKKKPAVANNKLHFSTGPSKSNKDTDSNVDSKAARFHFESSKEIQVQNDSRATATLETETEFSRDARAIREKALKQAEEALKGKSKTGGDDKLYKGMNQYTDYKAGL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="33814" PGL_stop="34266"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="33814" e_stop="34266"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.938"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.938">
            <gDNA_exon_boundary e_start="33814" e_stop="34266" e_length="453"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33814" stop="34139"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393076" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33814" stop="34122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393075" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33814" stop="33967"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392727" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33815" stop="34266"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200845" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAAAATGTTTGTATATTGCATAATTATAAGTGTATAGCAAGAAAGATATATGTTTTTCTCTGGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTGTATAATTCGCAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATAGTATAATTAAGTGTATAACACGAAGATATATATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAACAGAATTTATACACTTTTGTGTATAAAGTGAGAGAGGCGAGCGAGAACGGAGAGTGGCGAGCGAGATTTTTGGGAGAGAGACGCCTGGCAAACTTTAACTAACGTTTGCTATGGAGCACAATTAAATTAAACCCTAGCTACTCAATTTATTTTAGGTTATTAG</gDNA_template>
            <first_frame> *  N  V  C  I  L  H  N  Y  K  C  I  A  R  K  I  Y  V  F  L  W  L  Y  T  K  T  E  T  Q  Y  I  H  F  C  C  I  K  L  E  K  I  V  F  H  C  N  C  I  I  R  N  C  I  I  R  W  P  F  S  L  Q  Y  L  K  *  N  V  C  K  *  Y  N  *  V  Y  N  T  K  I  Y  I  F  A  C  V  Y  T  I  F  S  R  F  I  Q  N  R  N  R  I  Y  T  L  L  C  I  K  *  E  R  R  A  R  T  E  S  G  E  R  D  F  W  E  R  D  A  W  Q  T  L  T  N  V  C  Y  G  A  Q  L  N  *  T  L  A  T  Q  F  I  L  G  Y  * </first_frame>
            <second_frame>  K  M  F  V  Y  C  I  I  I  S  V  *  Q  E  R  Y  M  F  F  S  G  F  I  Q  K  Q  K  H  N  I  Y  T  S  V  V  *  S  *  R  K  L  Y  F  T  A  I  V  *  F  A  I  V  *  F  V  G  L  F  L  C  N  I  *  S  K  M  F  V  N  S  I  I  K  C  I  T  R  R  Y  I  F  L  H  V  Y  I  Q  F  S  L  A  L  Y  K  T  E  T  E  F  I  H  F  C  V  *  S  E  R  G  E  R  E  R  R  V  A  S  E  I  F  G  R  E  T  P  G  K  L  *  L  T  F  A  M  E  H  N  *  I  K  P  *  L  L  N  L  F  *  V  I   </second_frame>
            <third_frame>   K  C  L  Y  I  A  *  L  *  V  Y  S  K  K  D  I  C  F  S  L  A  L  Y  K  N  R  N  T  I  Y  T  L  L  L  Y  K  V  R  E  N  C  I  S  L  Q  L  Y  N  S  Q  L  Y  N  S  L  A  F  F  S  A  I  F  E  V  K  C  L  *  I  V  *  L  S  V  *  H  E  D  I  Y  F  C  M  C  I  Y  N  F  L  S  L  Y  T  K  Q  K  Q  N  L  Y  T  F  V  Y  K  V  R  E  A  S  E  N  G  E  W  R  A  R  F  L  G  E  R  R  L  A  N  F  N  *  R  L  L  W  S  T  I  K  L  N  P  S  Y  S  I  Y  F  R  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0172H10.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="45379" PGL_stop="46336"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="45379" e_stop="46047"/>
            <exon e_start="46172" e_stop="46229"/>
            <exon e_start="46318" e_stop="46336"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.929" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="45379" e_stop="46047" e_length="669"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.929">
            <gDNA_intron_boundary i_start="46048" i_stop="46171" i_length="124"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="46172" e_stop="46229" e_length="58"/>
          </exon>
          <intron i_serial="2" don_prob="0.988" acc_prob="0.000">
            <gDNA_intron_boundary i_start="46230" i_stop="46317" i_length="88"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="46318" e_stop="46336" e_length="19"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45379" stop="46047"/>
              <exon start="46172" stop="46229"/>
              <exon start="46318" stop="46336"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343589" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45386" stop="45915"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330414" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45392" stop="45980"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333702" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45404" stop="46047"/>
              <exon start="46172" stop="46229"/>
              <exon start="46318" stop="46326"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374217" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45404" stop="45941"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305731" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAGAAGAAAAAAAAGCCCTCTCTCTCAAAAACAATTAAAGATGTGTAATTCCAAAACTAAACTGCAGAGCAGCGCACAAACTCTCTCACAAATTAATGGCCGCCCTGTTCTTCAACCACATAGCAATATAGTTCCTCTTTACGAACGCCGCAACTCGCTTAAAAAGACAACACACACTGCTGCACCTGTTACTGCAAATGGAAGTACTAAAGTCAAGATGAGTTCATCAACAACTCCACCGGTCTCACCTAAAATGAAGTCGCCAAGACTACCAGCTATTAAGAGAGGGAATAACATTGATCCTAATGGCTTGAGTTCAAGTGCTGAGAAAATTGTGACACCCAAAGGGACTGCTAATAAAGCCCCAATTCTGTTAAAGAAGCCCAAGAAAAGCAGCGGGGGCTTAGCCTCACCCTCTTCTGTGGAGAATTCTTCATTGAAATATTCTTCTTCCTTGATAGTCGAGGCTCCGGGAAGTATAGCAGCAGCAAGAAGGGAACAAGTAGCAATTGCACAAGTGCAGAGGAAAATGAAAATTGCGCATTATGGAAGAACAAAATCAGCCAAGTATGAAGGAAAAGTATCTTCTCTTGACCCTTCCTTCGCCTCAGCAGTTATCCCTAATCCTAGAGAGGACAAAAGATGCAGCTTTATCACACCTAATTCAG : ACCCACTCTATATTGCATACCATGATGAAGAATGGGGAGTTCCAGTACATGATGATAA : TCTGCTTTTTGAATTGCTG</gDNA_template>
            <first_frame> K  E  E  K  K  A  L  S  L  K  N  N  *  R  C  V  I  P  K  L  N  C  R  A  A  H  K  L  S  H  K  L  M  A  A  L  F  F  N  H  I  A  I  *  F  L  F  T  N  A  A  T  R  L  K  R  Q  H  T  L  L  H  L  L  L  Q  M  E  V  L  K  S  R  *  V  H  Q  Q  L  H  R  S  H  L  K  *  S  R  Q  D  Y  Q  L  L  R  E  G  I  T  L  I  L  M  A  *  V  Q  V  L  R  K  L  *  H  P  K  G  L  L  I  K  P  Q  F  C  *  R  S  P  R  K  A  A  G  A  *  P  H  P  L  L  W  R  I  L  H  *  N  I  L  L  P  *  *  S  R  L  R  E  V  *  Q  Q  Q  E  G  N  K  *  Q  L  H  K  C  R  G  K  *  K  L  R  I  M  E  E  Q  N  Q  P  S  M  K  E  K  Y  L  L  L  T  L  P  S  P  Q  Q  L  S  L  I  L  E  R  T  K  D  A  A  L  S  H  L  I  Q  :  T  H  S  I  L  H  T  M  M  K  N  G  E  F  Q  Y  M  M  I   : I  C  F  L  N  C   </first_frame>
            <second_frame>  K  K  K  K  K  P  S  L  S  K  T  I  K  D  V  *  F  Q  N  *  T  A  E  Q  R  T  N  S  L  T  N  *  W  P  P  C  S  S  T  T  *  Q  Y  S  S  S  L  R  T  P  Q  L  A  *  K  D  N  T  H  C  C  T  C  Y  C  K  W  K  Y  *  S  Q  D  E  F  I  N  N  S  T  G  L  T  *  N  E  V  A  K  T  T  S  Y  *  E  R  E  *  H  *  S  *  W  L  E  F  K  C  *  E  N  C  D  T  Q  R  D  C  *  *  S  P  N  S  V  K  E  A  Q  E  K  Q  R  G  L  S  L  T  L  F  C  G  E  F  F  I  E  I  F  F  F  L  D  S  R  G  S  G  K  Y  S  S  S  K  K  G  T  S  S  N  C  T  S  A  E  E  N  E  N  C  A  L  W  K  N  K  I  S  Q  V  *  R  K  S  I  F  S  *  P  F  L  R  L  S  S  Y  P  *  S  *  R  G  Q  K  M  Q  L  Y  H  T  *  F  R :   P  T  L  Y  C  I  P  *  *  R  M  G  S  S  S  T  *  *  *  :  S  A  F  *  I  A  </second_frame>
            <third_frame>   R  R  K  K  S  P  L  S  Q  K  Q  L  K  M  C  N  S  K  T  K  L  Q  S  S  A  Q  T  L  S  Q  I  N  G  R  P  V  L  Q  P  H  S  N  I  V  P  L  Y  E  R  R  N  S  L  K  K  T  T  H  T  A  A  P  V  T  A  N  G  S  T  K  V  K  M  S  S  S  T  T  P  P  V  S  P  K  M  K  S  P  R  L  P  A  I  K  R  G  N  N  I  D  P  N  G  L  S  S  S  A  E  K  I  V  T  P  K  G  T  A  N  K  A  P  I  L  L  K  K  P  K  K  S  S  G  G  L  A  S  P  S  S  V  E  N  S  S  L  K  Y  S  S  S  L  I  V  E  A  P  G  S  I  A  A  A  R  R  E  Q  V  A  I  A  Q  V  Q  R  K  M  K  I  A  H  Y  G  R  T  K  S  A  K  Y  E  G  K  V  S  S  L  D  P  S  F  A  S  A  V  I  P  N  P  R  E  D  K  R  C  S  F  I  T  P  N  S   : D  P  L  Y  I  A  Y  H  D  E  E  W  G  V  P  V  H  D  D  N :   L  L  F  E  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="45381" stop="46047"/>
                    <exon start="46172" stop="46229"/>
                    <exon start="46318" stop="46336"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>744</number_coding_nucleotides>
                  <number_encoded_amino_acids>248</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RRKKSPLSQKQLKMCNSKTKLQSSAQTLSQINGRPVLQPHSNIVPLYERRNSLKKTTHTAAPVTANGSTKVKMSSSTTPPVSPKMKSPRLPAIKRGNNIDPNGLSSSAEKIVTPKGTANKAPILLKKPKKSSGGLASPSSVENSSLKYSSSLIVEAPGSIAAARREQVAIAQVQRKMKIAHYGRTKSAKYEGKVSSLDPSFASAVIPNPREDKRCSFITPNSDPLYIAYHDEEWGVPVHDDNLLFELL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="47056" PGL_stop="48508"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="47056" e_stop="48089"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="47056" e_stop="48089" e_length="1034"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47056" stop="47767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321931" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47470" stop="48012"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E537688" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47471" stop="47897"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266117" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47702" stop="48089"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228661" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47703" stop="48089"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229141" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTAAGAAGACATTTGGTTCGTTCGACAAGTATCTGTGGGGATTCGTGAACAACAAGCCCATTGCAACACAATACAAGGCATGCAACAAAATCCCAGTGAAGACTTCAAAATCAGAAACCATAAGTAAAGACATGGTCAAAAGAGGGTTCCGCTATGTCGGCCCCACCGTTATACACTCGTTCATGCAGGCAGCCGGACTCACCAACGACCACCTGATCGCCTGTCCACGACATCTCCCGTGTGTGGCATTGGCAACTCAACCTGCACCCCCTGCCCTATAATTTACCTTTTATCAACTACTCTACTAAGCCATAGTTTTAAGTTTAGCAAACAAAAGTTGTTGAGGAAACCTAGTTGAGATTGTCTAACAATATTCTACCTTCTTCTTTTTTTTGGGGTGATGAATTTAGATGTTTTAAGTGATTTTATTTGATGATGTAAGATATTGAGTTGGTTAAATGTATAGAAAGTAGAAAGGAATAAAGTAAGGATGGTATAGATATGGGGGGACAGGAAGCATGTGCAGGGTGGGCAGGGGAATGCCAATTGCATGTGCCATTTGATTTAATTTTGTGTGGGCACTGACCACCACCACCATCAGCAGCAAAAGCCATCACTGCACCACTATTTACTTGCACTTGCGTGCTTTTGAACAGTGACTTATCTTTCAAGGATAAGATCATCAAGTACACAGAGGAGGAGCCTTTGCTTCCCCCAATTATAGGCCCTTCATTCCTGTTGCTGCAGGGAATAAATAGTGGATGATTTATTCCCTGCATCATTCAACAAAAATGAAGCCACGTGCAGCACCTTAACACAAAAGTAAAGGGGCATTAGTTTGGTTATGTTTGTTGCCCCATCTTTGATATGTAAACTTGACAGAGAGGCAAGCACAAAGTGCCTTGCAGTTTGTATCATATGTTTAGTGTGGAATTTTGAGTGTTTTTTCTTTGGCCCTGGCCTTCTTTTTTTCTTCTTATGGGGATTGTAATTCTATTATGGATTTTAGTGGCTATCAAGATATTTTATGGAT</gDNA_template>
            <first_frame> I  K  K  T  F  G  S  F  D  K  Y  L  W  G  F  V  N  N  K  P  I  A  T  Q  Y  K  A  C  N  K  I  P  V  K  T  S  K  S  E  T  I  S  K  D  M  V  K  R  G  F  R  Y  V  G  P  T  V  I  H  S  F  M  Q  A  A  G  L  T  N  D  H  L  I  A  C  P  R  H  L  P  C  V  A  L  A  T  Q  P  A  P  P  A  L  *  F  T  F  Y  Q  L  L  Y  *  A  I  V  L  S  L  A  N  K  S  C  *  G  N  L  V  E  I  V  *  Q  Y  S  T  F  F  F  F  L  G  *  *  I  *  M  F  *  V  I  L  F  D  D  V  R  Y  *  V  G  *  M  Y  R  K  *  K  G  I  K  *  G  W  Y  R  Y  G  G  T  G  S  M  C  R  V  G  R  G  M  P  I  A  C  A  I  *  F  N  F  V  W  A  L  T  T  T  T  I  S  S  K  S  H  H  C  T  T  I  Y  L  H  L  R  A  F  E  Q  *  L  I  F  Q  G  *  D  H  Q  V  H  R  G  G  A  F  A  S  P  N  Y  R  P  F  I  P  V  A  A  G  N  K  *  W  M  I  Y  S  L  H  H  S  T  K  M  K  P  R  A  A  P  *  H  K  S  K  G  A  L  V  W  L  C  L  L  P  H  L  *  Y  V  N  L  T  E  R  Q  A  Q  S  A  L  Q  F  V  S  Y  V  *  C  G  I  L  S  V  F  S  L  A  L  A  F  F  F  S  S  Y  G  D  C  N  S  I  M  D  F  S  G  Y  Q  D  I  L  W   </first_frame>
            <second_frame>  L  R  R  H  L  V  R  S  T  S  I  C  G  D  S  *  T  T  S  P  L  Q  H  N  T  R  H  A  T  K  S  Q  *  R  L  Q  N  Q  K  P  *  V  K  T  W  S  K  E  G  S  A  M  S  A  P  P  L  Y  T  R  S  C  R  Q  P  D  S  P  T  T  T  *  S  P  V  H  D  I  S  R  V  W  H  W  Q  L  N  L  H  P  L  P  Y  N  L  P  F  I  N  Y  S  T  K  P  *  F  *  V  *  Q  T  K  V  V  E  E  T  *  L  R  L  S  N  N  I  L  P  S  S  F  F  W  G  D  E  F  R  C  F  K  *  F  Y  L  M  M  *  D  I  E  L  V  K  C  I  E  S  R  K  E  *  S  K  D  G  I  D  M  G  G  Q  E  A  C  A  G  W  A  G  E  C  Q  L  H  V  P  F  D  L  I  L  C  G  H  *  P  P  P  P  S  A  A  K  A  I  T  A  P  L  F  T  C  T  C  V  L  L  N  S  D  L  S  F  K  D  K  I  I  K  Y  T  E  E  E  P  L  L  P  P  I  I  G  P  S  F  L  L  L  Q  G  I  N  S  G  *  F  I  P  C  I  I  Q  Q  K  *  S  H  V  Q  H  L  N  T  K  V  K  G  H  *  F  G  Y  V  C  C  P  I  F  D  M  *  T  *  Q  R  G  K  H  K  V  P  C  S  L  Y  H  M  F  S  V  E  F  *  V  F  F  L  W  P  W  P  S  F  F  L  L  M  G  I  V  I  L  L  W  I  L  V  A  I  K  I  F  Y  G  </second_frame>
            <third_frame>   *  E  D  I  W  F  V  R  Q  V  S  V  G  I  R  E  Q  Q  A  H  C  N  T  I  Q  G  M  Q  Q  N  P  S  E  D  F  K  I  R  N  H  K  *  R  H  G  Q  K  R  V  P  L  C  R  P  H  R  Y  T  L  V  H  A  G  S  R  T  H  Q  R  P  P  D  R  L  S  T  T  S  P  V  C  G  I  G  N  S  T  C  T  P  C  P  I  I  Y  L  L  S  T  T  L  L  S  H  S  F  K  F  S  K  Q  K  L  L  R  K  P  S  *  D  C  L  T  I  F  Y  L  L  L  F  F  G  V  M  N  L  D  V  L  S  D  F  I  *  *  C  K  I  L  S  W  L  N  V  *  K  V  E  R  N  K  V  R  M  V  *  I  W  G  D  R  K  H  V  Q  G  G  Q  G  N  A  N  C  M  C  H  L  I  *  F  C  V  G  T  D  H  H  H  H  Q  Q  Q  K  P  S  L  H  H  Y  L  L  A  L  A  C  F  *  T  V  T  Y  L  S  R  I  R  S  S  S  T  Q  R  R  S  L  C  F  P  Q  L  *  A  L  H  S  C  C  C  R  E  *  I  V  D  D  L  F  P  A  S  F  N  K  N  E  A  T  C  S  T  L  T  Q  K  *  R  G  I  S  L  V  M  F  V  A  P  S  L  I  C  K  L  D  R  E  A  S  T  K  C  L  A  V  C  I  I  C  L  V  W  N  F  E  C  F  F  F  G  P  G  L  L  F  F  F  L  W  G  L  *  F  Y  Y  G  F  *  W  L  S  R  Y  F  M  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47056" stop="47337"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKKTFGSFDKYLWGFVNNKPIATQYKACNKIPVKTSKSETISKDMVKRGFRYVGPTVIHSFMQAAGLTNDHLIACPRHLPCVALATQPAPPAL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47184" stop="47414"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RHGQKRVPLCRPHRYTLVHAGSRTHQRPPDRLSTTSPVCGIGNSTCTPCPIIYLLSTTLLSHSFKFSKQKLLRKPS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="47056" e_stop="48009"/>
            <exon e_start="48281" e_stop="48307"/>
            <exon e_start="48475" e_stop="48508"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.994"/>
          <exon-intron don_prob="0.223" acc_prob="0.802" e_score="0.556"/>
          <exon-only e_score="0.559"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="47056" e_stop="48009" e_length="954"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="48010" i_stop="48280" i_length="271"/>
          </intron>
          <exon e_serial="2" e_score="0.556">
            <gDNA_exon_boundary e_start="48281" e_stop="48307" e_length="27"/>
          </exon>
          <intron i_serial="2" don_prob="0.223" acc_prob="0.802">
            <gDNA_intron_boundary i_start="48308" i_stop="48474" i_length="167"/>
          </intron>
          <exon e_serial="3" e_score="0.559">
            <gDNA_exon_boundary e_start="48475" e_stop="48508" e_length="34"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47056" stop="47767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321931" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47470" stop="48009"/>
              <exon start="48281" stop="48307"/>
              <exon start="48475" stop="48508"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E537685" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47471" stop="47897"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266117" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTAAGAAGACATTTGGTTCGTTCGACAAGTATCTGTGGGGATTCGTGAACAACAAGCCCATTGCAACACAATACAAGGCATGCAACAAAATCCCAGTGAAGACTTCAAAATCAGAAACCATAAGTAAAGACATGGTCAAAAGAGGGTTCCGCTATGTCGGCCCCACCGTTATACACTCGTTCATGCAGGCAGCCGGACTCACCAACGACCACCTGATCGCCTGTCCACGACATCTCCCGTGTGTGGCATTGGCAACTCAACCTGCACCCCCTGCCCTATAATTTACCTTTTATCAACTACTCTACTAAGCCATAGTTTTAAGTTTAGCAAACAAAAGTTGTTGAGGAAACCTAGTTGAGATTGTCTAACAATATTCTACCTTCTTCTTTTTTTTGGGGTGATGAATTTAGATGTTTTAAGTGATTTTATTTGATGATGTAAGATATTGAGTTGGTTAAATGTATAGAAAGTAGAAAGGAATAAAGTAAGGATGGTATAGATATGGGGGGACAGGAAGCATGTGCAGGGTGGGCAGGGGAATGCCAATTGCATGTGCCATTTGATTTAATTTTGTGTGGGCACTGACCACCACCACCATCAGCAGCAAAAGCCATCACTGCACCACTATTTACTTGCACTTGCGTGCTTTTGAACAGTGACTTATCTTTCAAGGATAAGATCATCAAGTACACAGAGGAGGAGCCTTTGCTTCCCCCAATTATAGGCCCTTCATTCCTGTTGCTGCAGGGAATAAATAGTGGATGATTTATTCCCTGCATCATTCAACAAAAATGAAGCCACGTGCAGCACCTTAACACAAAAGTAAAGGGGCATTAGTTTGGTTATGTTTGTTGCCCCATCTTTGATATGTAAACTTGACAGAGAGGCAAGCACAAAGTGCCTTGCAGTTTGTATCATATGTTTAGTGTGGAATTTTGAGTGTTTTTTCTTTG : AAATAAAATCTTAAAAGTAAAGTGCAG : CAGGAAAATGTAAACAGATCCAAGACAAGAAGAA</gDNA_template>
            <first_frame> I  K  K  T  F  G  S  F  D  K  Y  L  W  G  F  V  N  N  K  P  I  A  T  Q  Y  K  A  C  N  K  I  P  V  K  T  S  K  S  E  T  I  S  K  D  M  V  K  R  G  F  R  Y  V  G  P  T  V  I  H  S  F  M  Q  A  A  G  L  T  N  D  H  L  I  A  C  P  R  H  L  P  C  V  A  L  A  T  Q  P  A  P  P  A  L  *  F  T  F  Y  Q  L  L  Y  *  A  I  V  L  S  L  A  N  K  S  C  *  G  N  L  V  E  I  V  *  Q  Y  S  T  F  F  F  F  L  G  *  *  I  *  M  F  *  V  I  L  F  D  D  V  R  Y  *  V  G  *  M  Y  R  K  *  K  G  I  K  *  G  W  Y  R  Y  G  G  T  G  S  M  C  R  V  G  R  G  M  P  I  A  C  A  I  *  F  N  F  V  W  A  L  T  T  T  T  I  S  S  K  S  H  H  C  T  T  I  Y  L  H  L  R  A  F  E  Q  *  L  I  F  Q  G  *  D  H  Q  V  H  R  G  G  A  F  A  S  P  N  Y  R  P  F  I  P  V  A  A  G  N  K  *  W  M  I  Y  S  L  H  H  S  T  K  M  K  P  R  A  A  P  *  H  K  S  K  G  A  L  V  W  L  C  L  L  P  H  L  *  Y  V  N  L  T  E  R  Q  A  Q  S  A  L  Q  F  V  S  Y  V  *  C  G  I  L  S  V  F  S  L  :  K  *  N  L  K  S  K  V  Q  :  Q  E  N  V  N  R  S  K  T  R  R  </first_frame>
            <second_frame>  L  R  R  H  L  V  R  S  T  S  I  C  G  D  S  *  T  T  S  P  L  Q  H  N  T  R  H  A  T  K  S  Q  *  R  L  Q  N  Q  K  P  *  V  K  T  W  S  K  E  G  S  A  M  S  A  P  P  L  Y  T  R  S  C  R  Q  P  D  S  P  T  T  T  *  S  P  V  H  D  I  S  R  V  W  H  W  Q  L  N  L  H  P  L  P  Y  N  L  P  F  I  N  Y  S  T  K  P  *  F  *  V  *  Q  T  K  V  V  E  E  T  *  L  R  L  S  N  N  I  L  P  S  S  F  F  W  G  D  E  F  R  C  F  K  *  F  Y  L  M  M  *  D  I  E  L  V  K  C  I  E  S  R  K  E  *  S  K  D  G  I  D  M  G  G  Q  E  A  C  A  G  W  A  G  E  C  Q  L  H  V  P  F  D  L  I  L  C  G  H  *  P  P  P  P  S  A  A  K  A  I  T  A  P  L  F  T  C  T  C  V  L  L  N  S  D  L  S  F  K  D  K  I  I  K  Y  T  E  E  E  P  L  L  P  P  I  I  G  P  S  F  L  L  L  Q  G  I  N  S  G  *  F  I  P  C  I  I  Q  Q  K  *  S  H  V  Q  H  L  N  T  K  V  K  G  H  *  F  G  Y  V  C  C  P  I  F  D  M  *  T  *  Q  R  G  K  H  K  V  P  C  S  L  Y  H  M  F  S  V  E  F  *  V  F  F  L  * :   N  K  I  L  K  V  K  C  S :   R  K  M  *  T  D  P  R  Q  E  E </second_frame>
            <third_frame>   *  E  D  I  W  F  V  R  Q  V  S  V  G  I  R  E  Q  Q  A  H  C  N  T  I  Q  G  M  Q  Q  N  P  S  E  D  F  K  I  R  N  H  K  *  R  H  G  Q  K  R  V  P  L  C  R  P  H  R  Y  T  L  V  H  A  G  S  R  T  H  Q  R  P  P  D  R  L  S  T  T  S  P  V  C  G  I  G  N  S  T  C  T  P  C  P  I  I  Y  L  L  S  T  T  L  L  S  H  S  F  K  F  S  K  Q  K  L  L  R  K  P  S  *  D  C  L  T  I  F  Y  L  L  L  F  F  G  V  M  N  L  D  V  L  S  D  F  I  *  *  C  K  I  L  S  W  L  N  V  *  K  V  E  R  N  K  V  R  M  V  *  I  W  G  D  R  K  H  V  Q  G  G  Q  G  N  A  N  C  M  C  H  L  I  *  F  C  V  G  T  D  H  H  H  H  Q  Q  Q  K  P  S  L  H  H  Y  L  L  A  L  A  C  F  *  T  V  T  Y  L  S  R  I  R  S  S  S  T  Q  R  R  S  L  C  F  P  Q  L  *  A  L  H  S  C  C  C  R  E  *  I  V  D  D  L  F  P  A  S  F  N  K  N  E  A  T  C  S  T  L  T  Q  K  *  R  G  I  S  L  V  M  F  V  A  P  S  L  I  C  K  L  D  R  E  A  S  T  K  C  L  A  V  C  I  I  C  L  V  W  N  F  E  C  F  F  F   : E  I  K  S  *  K  *  S  A   : A  G  K  C  K  Q  I  Q  D  K  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47056" stop="47337"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKKTFGSFDKYLWGFVNNKPIATQYKACNKIPVKTSKSETISKDMVKRGFRYVGPTVIHSFMQAAGLTNDHLIACPRHLPCVALATQPAPPAL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47184" stop="47414"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RHGQKRVPLCRPHRYTLVHAGSRTHQRPPDRLSTTSPVCGIGNSTCTPCPIIYLLSTTLLSHSFKFSKQKLLRKPS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="57313" PGL_stop="55876"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57313" e_stop="55876"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="57313" e_stop="55876" e_length="1438"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57313" stop="56788"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244397" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57310" stop="56726"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269238" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57296" stop="56562"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729337" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57284" stop="56645"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370588" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57284" stop="56851"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271275" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57222" stop="56708"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245732" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56972" stop="56599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219598" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56868" stop="56417"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348894" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56785" stop="55967"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713839" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56661" stop="55974"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370587" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56595" stop="56049"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56515" stop="55876"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339147" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTGTCAATCCAACCTAGCCGCAATGAAGAAGAAACAGAAGTCCACCACCATCTCCGCCGAAGATACGGCGGACGCTACCGCCGTAACCGCCAGCACCACAATAGATTTGAAAGCCCTAATCCGGGATAACAGGCTCTTCTTCGACAAGTTGATTGACTTAATTCCTCCTAGATTCTACCTCCCTAAAGATGAACCCGATACCTGGTATCGAGGCCTTCCCAAAGCCGCCAAAGCTTCATTGAAGAAACAATCCAGGGAGAATCTCAAACTCGCCCGCCGCAACCGGCTTGACCCCGAGAAGAAAGAACAGTCCTCTACTGTCGGCCTCCTCGAACAATCCCTTCAGAAAAAGCAAAAAACTGACGAGGAGGATGATTCCGGCGAGGAGGATCATGGTGAACCTACGCCTATTAATTTGGAGGAAAACGATAACCCTAACAACGATAACTACTCTGGTACTTACGAAGAGTTGAGGCGTAGGCTACACAGAAAAATCGAAATGCTCCGCGGTAACCGGGGTGATGGCGAGAGTTCGGAGAGAAACAAATTTAATCAGCGCAAGAGGAGTGAAAAGGATGCATCTTTAGAGAAATCCGATGGTAAGAAGAGAAAGAGGGGTGAAGACGACAATGGAGAAGATACTTCAATGGAAAAGGACATAGAGTTTGGGAAAGTTAAATTAGGAGACGACTATGACAAGAAAAAGAAGAAGAAGAAAGTATCCAAACCCAAAGAGTTGGAAAGACTGAAGAGGCTGGAAGAGGTGAAGAGGGAGAATAAGACGCTGGCGGATAAGGAAGCATGGAAGGCAGCAGCAAACAAGGCAATGGGATTGAAGGTGTTTGATAACCCTAAGTTGTTGAAGGAGAGTTTGAAGAAGGATAAGAGAAAGAAAGAGAAGAGTTCTGAGAAGTGGAAGGAAAGAATTCAGACTACGGAGAAGATGAAGAATGAGCGACAGCAGAAGAGAAGGGATAACATTGCTGGCAAAGCCAAGGAGAAGAAGATGAGGAAGATTGCCAAAAGGGAAAAGAAGCTCATGAGGCCGGGCTTTGAGGGGCGAAAGGAAGGCTACATTACTCAGGATAAAAGCTAAACTGGTCATGAACTCTTTCTTATGCCTTCTTACTTTGAATTTAGCTGCTCTCTCATTTGGAGAGAGTTTTGTGTTTGGTCTGAAATCTTTTGCTAATTCTGTGCTAGTCAAGTTTAAGCTTTTTCTATTCAGTAAGTAGTATGTTGGCTAATTAGCCTATCCCAACTGGTTTAGGATTAAGCATTGTTGATTCATAGTAACATGTTAGTTCATGATTTGTTTTCATGAAGTTAGCATTATAATATATGCTTGTCACCCAAATATCATTAGTTTGATTGGAACATATTGTATGCAAACATTTCTCAAACAGCTGTGGAAATGGAACAAATATGAGATTGACT</gDNA_template>
            <first_frame> I  V  N  P  T  *  P  Q  *  R  R  N  R  S  P  P  P  S  P  P  K  I  R  R  T  L  P  P  *  P  P  A  P  Q  *  I  *  K  P  *  S  G  I  T  G  S  S  S  T  S  *  L  T  *  F  L  L  D  S  T  S  L  K  M  N  P  I  P  G  I  E  A  F  P  K  P  P  K  L  H  *  R  N  N  P  G  R  I  S  N  S  P  A  A  T  G  L  T  P  R  R  K  N  S  P  L  L  S  A  S  S  N  N  P  F  R  K  S  K  K  L  T  R  R  M  I  P  A  R  R  I  M  V  N  L  R  L  L  I  W  R  K  T  I  T  L  T  T  I  T  T  L  V  L  T  K  S  *  G  V  G  Y  T  E  K  S  K  C  S  A  V  T  G  V  M  A  R  V  R  R  E  T  N  L  I  S  A  R  G  V  K  R  M  H  L  *  R  N  P  M  V  R  R  E  R  G  V  K  T  T  M  E  K  I  L  Q  W  K  R  T  *  S  L  G  K  L  N  *  E  T  T  M  T  R  K  R  R  R  R  K  Y  P  N  P  K  S  W  K  D  *  R  G  W  K  R  *  R  G  R  I  R  R  W  R  I  R  K  H  G  R  Q  Q  Q  T  R  Q  W  D  *  R  C  L  I  T  L  S  C  *  R  R  V  *  R  R  I  R  E  R  K  R  R  V  L  R  S  G  R  K  E  F  R  L  R  R  R  *  R  M  S  D  S  R  R  E  G  I  T  L  L  A  K  P  R  R  R  R  *  G  R  L  P  K  G  K  R  S  S  *  G  R  A  L  R  G  E  R  K  A  T  L  L  R  I  K  A  K  L  V  M  N  S  F  L  C  L  L  T  L  N  L  A  A  L  S  F  G  E  S  F  V  F  G  L  K  S  F  A  N  S  V  L  V  K  F  K  L  F  L  F  S  K  *  Y  V  G  *  L  A  Y  P  N  W  F  R  I  K  H  C  *  F  I  V  T  C  *  F  M  I  C  F  H  E  V  S  I  I  I  Y  A  C  H  P  N  I  I  S  L  I  G  T  Y  C  M  Q  T  F  L  K  Q  L  W  K  W  N  K  Y  E  I  D  </first_frame>
            <second_frame>  L  S  I  Q  P  S  R  N  E  E  E  T  E  V  H  H  H  L  R  R  R  Y  G  G  R  Y  R  R  N  R  Q  H  H  N  R  F  E  S  P  N  P  G  *  Q  A  L  L  R  Q  V  D  *  L  N  S  S  *  I  L  P  P  *  R  *  T  R  Y  L  V  S  R  P  S  Q  S  R  Q  S  F  I  E  E  T  I  Q  G  E  S  Q  T  R  P  P  Q  P  A  *  P  R  E  E  R  T  V  L  Y  C  R  P  P  R  T  I  P  S  E  K  A  K  N  *  R  G  G  *  F  R  R  G  G  S  W  *  T  Y  A  Y  *  F  G  G  K  R  *  P  *  Q  R  *  L  L  W  Y  L  R  R  V  E  A  *  A  T  Q  K  N  R  N  A  P  R  *  P  G  *  W  R  E  F  G  E  K  Q  I  *  S  A  Q  E  E  *  K  G  C  I  F  R  E  I  R  W  *  E  E  K  E  G  *  R  R  Q  W  R  R  Y  F  N  G  K  G  H  R  V  W  E  S  *  I  R  R  R  L  *  Q  E  K  E  E  E  E  S  I  Q  T  Q  R  V  G  K  T  E  E  A  G  R  G  E  E  G  E  *  D  A  G  G  *  G  S  M  E  G  S  S  K  Q  G  N  G  I  E  G  V  *  *  P  *  V  V  E  G  E  F  E  E  G  *  E  K  E  R  E  E  F  *  E  V  E  G  K  N  S  D  Y  G  E  D  E  E  *  A  T  A  E  E  K  G  *  H  C  W  Q  S  Q  G  E  E  D  E  E  D  C  Q  K  G  K  E  A  H  E  A  G  L  *  G  A  K  G  R  L  H  Y  S  G  *  K  L  N  W  S  *  T  L  S  Y  A  F  L  L  *  I  *  L  L  S  H  L  E  R  V  L  C  L  V  *  N  L  L  L  I  L  C  *  S  S  L  S  F  F  Y  S  V  S  S  M  L  A  N  *  P  I  P  T  G  L  G  L  S  I  V  D  S  *  *  H  V  S  S  *  F  V  F  M  K  L  A  L  *  Y  M  L  V  T  Q  I  S  L  V  *  L  E  H  I  V  C  K  H  F  S  N  S  C  G  N  G  T  N  M  R  L  T </second_frame>
            <third_frame>   C  Q  S  N  L  A  A  M  K  K  K  Q  K  S  T  T  I  S  A  E  D  T  A  D  A  T  A  V  T  A  S  T  T  I  D  L  K  A  L  I  R  D  N  R  L  F  F  D  K  L  I  D  L  I  P  P  R  F  Y  L  P  K  D  E  P  D  T  W  Y  R  G  L  P  K  A  A  K  A  S  L  K  K  Q  S  R  E  N  L  K  L  A  R  R  N  R  L  D  P  E  K  K  E  Q  S  S  T  V  G  L  L  E  Q  S  L  Q  K  K  Q  K  T  D  E  E  D  D  S  G  E  E  D  H  G  E  P  T  P  I  N  L  E  E  N  D  N  P  N  N  D  N  Y  S  G  T  Y  E  E  L  R  R  R  L  H  R  K  I  E  M  L  R  G  N  R  G  D  G  E  S  S  E  R  N  K  F  N  Q  R  K  R  S  E  K  D  A  S  L  E  K  S  D  G  K  K  R  K  R  G  E  D  D  N  G  E  D  T  S  M  E  K  D  I  E  F  G  K  V  K  L  G  D  D  Y  D  K  K  K  K  K  K  K  V  S  K  P  K  E  L  E  R  L  K  R  L  E  E  V  K  R  E  N  K  T  L  A  D  K  E  A  W  K  A  A  A  N  K  A  M  G  L  K  V  F  D  N  P  K  L  L  K  E  S  L  K  K  D  K  R  K  K  E  K  S  S  E  K  W  K  E  R  I  Q  T  T  E  K  M  K  N  E  R  Q  Q  K  R  R  D  N  I  A  G  K  A  K  E  K  K  M  R  K  I  A  K  R  E  K  K  L  M  R  P  G  F  E  G  R  K  E  G  Y  I  T  Q  D  K  S  *  T  G  H  E  L  F  L  M  P  S  Y  F  E  F  S  C  S  L  I  W  R  E  F  C  V  W  S  E  I  F  C  *  F  C  A  S  Q  V  *  A  F  S  I  Q  *  V  V  C  W  L  I  S  L  S  Q  L  V  *  D  *  A  L  L  I  H  S  N  M  L  V  H  D  L  F  S  *  S  *  H  Y  N  I  C  L  S  P  K  Y  H  *  F  D  W  N  I  L  Y  A  N  I  S  Q  T  A  V  E  M  E  Q  I  *  D  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57311" stop="56217"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1092</number_coding_nucleotides>
                  <number_encoded_amino_acids>364</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CQSNLAAMKKKQKSTTISAEDTADATAVTASTTIDLKALIRDNRLFFDKLIDLIPPRFYLPKDEPDTWYRGLPKAAKASLKKQSRENLKLARRNRLDPEKKEQSSTVGLLEQSLQKKQKTDEEDDSGEEDHGEPTPINLEENDNPNNDNYSGTYEELRRRLHRKIEMLRGNRGDGESSERNKFNQRKRSEKDASLEKSDGKKRKRGEDDNGEDTSMEKDIEFGKVKLGDDYDKKKKKKKVSKPKELERLKRLEEVKRENKTLADKEAWKAAANKAMGLKVFDNPKLLKESLKKDKRKKEKSSEKWKERIQTTEKMKNERQQKRRDNIAGKAKEKKMRKIAKREKKLMRPGFEGRKEGYITQDKS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="63091" PGL_stop="66058"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="63091" e_stop="64461"/>
            <exon e_start="65353" e_stop="65971"/>
            <exon e_start="66048" e_stop="66058"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="0.999"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.818"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="63091" e_stop="64461" e_length="1371"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="64462" i_stop="65352" i_length="891"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="65353" e_stop="65971" e_length="619"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="65972" i_stop="66047" i_length="76"/>
          </intron>
          <exon e_serial="3" e_score="0.818">
            <gDNA_exon_boundary e_start="66048" e_stop="66058" e_length="11"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63091" stop="63678"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E724921" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63100" stop="64461"/>
              <exon start="65353" stop="65971"/>
              <exon start="66048" stop="66058"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745808" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63112" stop="63592"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367187" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63115" stop="63560"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203927" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63117" stop="63855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706830" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63119" stop="64024"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E739708" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63406" stop="64096"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332194" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63406" stop="64094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332192" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63975" stop="64249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203724" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64156" stop="64461"/>
              <exon start="65353" stop="65739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390131" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64157" stop="64461"/>
              <exon start="65353" stop="65516"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208370" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64196" stop="64461"/>
              <exon start="65353" stop="65827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734009" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65690" stop="65858"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339245" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGCAGATTTCAGTATAGAGAGAGAAAGAGAGAGAGAGAATACTGGAAAGAAGCAGTAGGCATTGTAAAGAAGAAACATCTAGATATACTCTAGAATAACTAAAACCCTGTTTTCTCTTTCCTTTTTTCTTCTTCTTCTTCTCTCTCTCTACTGTTCCGTCGTCTGCTCATTTTTATCTTTCAGTATGAGTAAGGAGAAAGAACGGAGGATGTTCGTTGGTGTTGTTTGGAATTGTGCTGCTGAGCTTAAGCTTCTTCTTACTGCTCTTCTTTTTCTCTGTTCTCTTATTACACTTCTTCACTTTATCCCTTCTCGTTTAATAACTTTCTCCCCTGTAGATCTTGGCAGCTGTATTTCTACTCCCATCGCCCCACTTCACTCTGTTTCCCACTTAAACGCTACGAATTCATCAACCCCATCTGCTAATACGAGTACTACTACTCCACCGCCGGCACCGGAGTCGCCGTCGTTGGAGAAAGACAGACTGTTACAAAACGGTGTCGTTAAGAGAGCTTTCAACCCTTTCGGCTCCGCCGCATACAACTTTATTCTGATGTCTGCTTATAGAGGAGGTTATAACACTTTTGCTGTAATGGGTTTAGGTTCAAAGCCTCTTCACGTCTACGGCAAACCCAGTTACCGTTGTGAGTGGGTTTCTTCTGATAAACAGAAAACCCCCATCTCCGTTGTTGGTCATAAGATCCTCCCGGACTGGGGTTATGGCAGGGTTTATACTGTGATAGTCATAAATTGCACTTTCCCTGTACCAGTTGGCAACGGCGAAAATGGCGGAAAACTTCTCGTTCACGCCACCACCAACGGCGGCGGCGACACTAACTTTAACACCACCGACACTTTCGAGGCATTGTCGGAAACGGGAAAGGATTTCGTCAACTTCACTTCCGTATATGAAGCTCCCCCAAAGTATGATTTCTTCTACTGCGGGTCATCTCTATACGGGAACTTGAGCCCACAGAGAGTAAGAGAGTGGCTGGCATTTCACGTTAGGCTGTTCGGAGAGAAGTCCCATTTCGTAATTCACGATGCTGGAGGTGTACATGAGGGGGTAATGGAGGTGCTTAAGCCATGGATGGAGAAAGGATACGTTACATTACAGGATATTAGGGACCAAGAGAGATTTGATGGGTACTATCATAATCAGTTCCTTATTGTCAATGATTGCTTACACAGATATAAGTTTCAAGCTAAATGGATGTTCTTCTTTGATGTGGATGAGTACATTTATGTACCAAAGAAGAGCACCATTAAATCTGTTGTGAATTCCTTATCGGATTATACACAATTCACCATTGAACAGATGCCAATGTCTAACAAGCTCTGTCTCGAAGAGGACCGCGGTAAATCCTATAG : AAAATGGGGGTTTGAGAAGCTAGTGTACAAGGACGTGAAGACAGGTATTAGGAGGGATCGAAAATATGCAGTACAACCTCGCAATGTGATCGCCAACGGTGTGCATATGTCTCAGAATACAGTAGGCAAGACAACACACAAGACAGAAGGACGTATCAAATACTTCCACTATCACGGGACCATCGCGGAGCACCGTGAACCATGCCGGCAGCTGGTCAACACCACAGCCATCACCGTTGACGGTATCCCTTATAATGTTGACACTACAATGAGAGATGTTGCTGCAACTGTTAAGAGATTCGAACTTAAGATGATTGGCACTACATTACAAAGAACGCGGCAATGAGGTCAACATTGTCTTGTACTTTGTTTTCAACATGTGTTATTACTTTTAAGTTTCTTTTGGTTAGAGCTATATATATTCTTCTTCTCTTGTTCATTTCTGTATGATAAAATTTTTCTTATACTTTTTGGAATAGAAGCATGGGTGGTATAGAAACAGCAGTGACAAGCATATTAGTATATGATTCGTTTATTTATATATTTGTAGGATTACAGGGTGTTTTGTACTGTTGTCTTTGTTTATAACACTATTTAATTCGCTTTATTTTGCCAAAAA : AAAAAATATAA</gDNA_template>
            <first_frame> C  R  F  Q  Y  R  E  R  K  R  E  R  E  Y  W  K  E  A  V  G  I  V  K  K  K  H  L  D  I  L  *  N  N  *  N  P  V  F  S  F  L  F  S  S  S  S  S  L  S  L  L  F  R  R  L  L  I  F  I  F  Q  Y  E  *  G  E  R  T  E  D  V  R  W  C  C  L  E  L  C  C  *  A  *  A  S  S  Y  C  S  S  F  S  L  F  S  Y  Y  T  S  S  L  Y  P  F  S  F  N  N  F  L  P  C  R  S  W  Q  L  Y  F  Y  S  H  R  P  T  S  L  C  F  P  L  K  R  Y  E  F  I  N  P  I  C  *  Y  E  Y  Y  Y  S  T  A  G  T  G  V  A  V  V  G  E  R  Q  T  V  T  K  R  C  R  *  E  S  F  Q  P  F  R  L  R  R  I  Q  L  Y  S  D  V  C  L  *  R  R  L  *  H  F  C  C  N  G  F  R  F  K  A  S  S  R  L  R  Q  T  Q  L  P  L  *  V  G  F  F  *  *  T  E  N  P  H  L  R  C  W  S  *  D  P  P  G  L  G  L  W  Q  G  L  Y  C  D  S  H  K  L  H  F  P  C  T  S  W  Q  R  R  K  W  R  K  T  S  R  S  R  H  H  Q  R  R  R  R  H  *  L  *  H  H  R  H  F  R  G  I  V  G  N  G  K  G  F  R  Q  L  H  F  R  I  *  S  S  P  K  V  *  F  L  L  L  R  V  I  S  I  R  E  L  E  P  T  E  S  K  R  V  A  G  I  S  R  *  A  V  R  R  E  V  P  F  R  N  S  R  C  W  R  C  T  *  G  G  N  G  G  A  *  A  M  D  G  E  R  I  R  Y  I  T  G  Y  *  G  P  R  E  I  *  W  V  L  S  *  S  V  P  Y  C  Q  *  L  L  T  Q  I  *  V  S  S  *  M  D  V  L  L  *  C  G  *  V  H  L  C  T  K  E  E  H  H  *  I  C  C  E  F  L  I  G  L  Y  T  I  H  H  *  T  D  A  N  V  *  Q  A  L  S  R  R  G  P  R  *  I  L  *  :  K  M  G  V  *  E  A  S  V  Q  G  R  E  D  R  Y  *  E  G  S  K  I  C  S  T  T  S  Q  C  D  R  Q  R  C  A  Y  V  S  E  Y  S  R  Q  D  N  T  Q  D  R  R  T  Y  Q  I  L  P  L  S  R  D  H  R  G  A  P  *  T  M  P  A  A  G  Q  H  H  S  H  H  R  *  R  Y  P  L  *  C  *  H  Y  N  E  R  C  C  C  N  C  *  E  I  R  T  *  D  D  W  H  Y  I  T  K  N  A  A  M  R  S  T  L  S  C  T  L  F  S  T  C  V  I  T  F  K  F  L  L  V  R  A  I  Y  I  L  L  L  L  F  I  S  V  *  *  N  F  S  Y  T  F  W  N  R  S  M  G  G  I  E  T  A  V  T  S  I  L  V  Y  D  S  F  I  Y  I  F  V  G  L  Q  G  V  L  Y  C  C  L  C  L  *  H  Y  L  I  R  F  I  L  P  K   : K  K  I  * </first_frame>
            <second_frame>  A  D  F  S  I  E  R  E  R  E  R  E  N  T  G  K  K  Q  *  A  L  *  R  R  N  I  *  I  Y  S  R  I  T  K  T  L  F  S  L  S  F  F  L  L  L  L  L  S  L  Y  C  S  V  V  C  S  F  L  S  F  S  M  S  K  E  K  E  R  R  M  F  V  G  V  V  W  N  C  A  A  E  L  K  L  L  L  T  A  L  L  F  L  C  S  L  I  T  L  L  H  F  I  P  S  R  L  I  T  F  S  P  V  D  L  G  S  C  I  S  T  P  I  A  P  L  H  S  V  S  H  L  N  A  T  N  S  S  T  P  S  A  N  T  S  T  T  T  P  P  P  A  P  E  S  P  S  L  E  K  D  R  L  L  Q  N  G  V  V  K  R  A  F  N  P  F  G  S  A  A  Y  N  F  I  L  M  S  A  Y  R  G  G  Y  N  T  F  A  V  M  G  L  G  S  K  P  L  H  V  Y  G  K  P  S  Y  R  C  E  W  V  S  S  D  K  Q  K  T  P  I  S  V  V  G  H  K  I  L  P  D  W  G  Y  G  R  V  Y  T  V  I  V  I  N  C  T  F  P  V  P  V  G  N  G  E  N  G  G  K  L  L  V  H  A  T  T  N  G  G  G  D  T  N  F  N  T  T  D  T  F  E  A  L  S  E  T  G  K  D  F  V  N  F  T  S  V  Y  E  A  P  P  K  Y  D  F  F  Y  C  G  S  S  L  Y  G  N  L  S  P  Q  R  V  R  E  W  L  A  F  H  V  R  L  F  G  E  K  S  H  F  V  I  H  D  A  G  G  V  H  E  G  V  M  E  V  L  K  P  W  M  E  K  G  Y  V  T  L  Q  D  I  R  D  Q  E  R  F  D  G  Y  Y  H  N  Q  F  L  I  V  N  D  C  L  H  R  Y  K  F  Q  A  K  W  M  F  F  F  D  V  D  E  Y  I  Y  V  P  K  K  S  T  I  K  S  V  V  N  S  L  S  D  Y  T  Q  F  T  I  E  Q  M  P  M  S  N  K  L  C  L  E  E  D  R  G  K  S  Y  R :   K  W  G  F  E  K  L  V  Y  K  D  V  K  T  G  I  R  R  D  R  K  Y  A  V  Q  P  R  N  V  I  A  N  G  V  H  M  S  Q  N  T  V  G  K  T  T  H  K  T  E  G  R  I  K  Y  F  H  Y  H  G  T  I  A  E  H  R  E  P  C  R  Q  L  V  N  T  T  A  I  T  V  D  G  I  P  Y  N  V  D  T  T  M  R  D  V  A  A  T  V  K  R  F  E  L  K  M  I  G  T  T  L  Q  R  T  R  Q  *  G  Q  H  C  L  V  L  C  F  Q  H  V  L  L  L  L  S  F  F  W  L  E  L  Y  I  F  F  F  S  C  S  F  L  Y  D  K  I  F  L  I  L  F  G  I  E  A  W  V  V  *  K  Q  Q  *  Q  A  Y  *  Y  M  I  R  L  F  I  Y  L  *  D  Y  R  V  F  C  T  V  V  F  V  Y  N  T  I  *  F  A  L  F  C  Q  K  :  K  K  Y   </second_frame>
            <third_frame>   Q  I  S  V  *  R  E  K  E  R  E  R  I  L  E  R  S  S  R  H  C  K  E  E  T  S  R  Y  T  L  E  *  L  K  P  C  F  L  F  P  F  F  F  F  F  F  S  L  S  T  V  P  S  S  A  H  F  Y  L  S  V  *  V  R  R  K  N  G  G  C  S  L  V  L  F  G  I  V  L  L  S  L  S  F  F  L  L  L  F  F  F  S  V  L  L  L  H  F  F  T  L  S  L  L  V  *  *  L  S  P  L  *  I  L  A  A  V  F  L  L  P  S  P  H  F  T  L  F  P  T  *  T  L  R  I  H  Q  P  H  L  L  I  R  V  L  L  L  H  R  R  H  R  S  R  R  R  W  R  K  T  D  C  Y  K  T  V  S  L  R  E  L  S  T  L  S  A  P  P  H  T  T  L  F  *  C  L  L  I  E  E  V  I  T  L  L  L  *  W  V  *  V  Q  S  L  F  T  S  T  A  N  P  V  T  V  V  S  G  F  L  L  I  N  R  K  P  P  S  P  L  L  V  I  R  S  S  R  T  G  V  M  A  G  F  I  L  *  *  S  *  I  A  L  S  L  Y  Q  L  A  T  A  K  M  A  E  N  F  S  F  T  P  P  P  T  A  A  A  T  L  T  L  T  P  P  T  L  S  R  H  C  R  K  R  E  R  I  S  S  T  S  L  P  Y  M  K  L  P  Q  S  M  I  S  S  T  A  G  H  L  Y  T  G  T  *  A  H  R  E  *  E  S  G  W  H  F  T  L  G  C  S  E  R  S  P  I  S  *  F  T  M  L  E  V  Y  M  R  G  *  W  R  C  L  S  H  G  W  R  K  D  T  L  H  Y  R  I  L  G  T  K  R  D  L  M  G  T  I  I  I  S  S  L  L  S  M  I  A  Y  T  D  I  S  F  K  L  N  G  C  S  S  L  M  W  M  S  T  F  M  Y  Q  R  R  A  P  L  N  L  L  *  I  P  Y  R  I  I  H  N  S  P  L  N  R  C  Q  C  L  T  S  S  V  S  K  R  T  A  V  N  P  I   : E  N  G  G  L  R  S  *  C  T  R  T  *  R  Q  V  L  G  G  I  E  N  M  Q  Y  N  L  A  M  *  S  P  T  V  C  I  C  L  R  I  Q  *  A  R  Q  H  T  R  Q  K  D  V  S  N  T  S  T  I  T  G  P  S  R  S  T  V  N  H  A  G  S  W  S  T  P  Q  P  S  P  L  T  V  S  L  I  M  L  T  L  Q  *  E  M  L  L  Q  L  L  R  D  S  N  L  R  *  L  A  L  H  Y  K  E  R  G  N  E  V  N  I  V  L  Y  F  V  F  N  M  C  Y  Y  F  *  V  S  F  G  *  S  Y  I  Y  S  S  S  L  V  H  F  C  M  I  K  F  F  L  Y  F  L  E  *  K  H  G  W  Y  R  N  S  S  D  K  H  I  S  I  *  F  V  Y  L  Y  I  C  R  I  T  G  C  F  V  L  L  S  L  F  I  T  L  F  N  S  L  Y  F  A  K  K :   K  N  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="63173" stop="64461"/>
                    <exon start="65353" stop="65698"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1632</number_coding_nucleotides>
                  <number_encoded_amino_acids>544</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IYSRITKTLFSLSFFLLLLLSLYCSVVCSFLSFSMSKEKERRMFVGVVWNCAAELKLLLTALLFLCSLITLLHFIPSRLITFSPVDLGSCISTPIAPLHSVSHLNATNSSTPSANTSTTTPPPAPESPSLEKDRLLQNGVVKRAFNPFGSAAYNFILMSAYRGGYNTFAVMGLGSKPLHVYGKPSYRCEWVSSDKQKTPISVVGHKILPDWGYGRVYTVIVINCTFPVPVGNGENGGKLLVHATTNGGGDTNFNTTDTFEALSETGKDFVNFTSVYEAPPKYDFFYCGSSLYGNLSPQRVREWLAFHVRLFGEKSHFVIHDAGGVHEGVMEVLKPWMEKGYVTLQDIRDQERFDGYYHNQFLIVNDCLHRYKFQAKWMFFFDVDEYIYVPKKSTIKSVVNSLSDYTQFTIEQMPMSNKLCLEEDRGKSYRKWGFEKLVYKDVKTGIRRDRKYAVQPRNVIANGVHMSQNTVGKTTHKTEGRIKYFHYHGTIAEHREPCRQLVNTTAITVDGIPYNVDTTMRDVAATVKRFELKMIGTTLQRTRQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="76117" PGL_stop="75665"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="76117" e_stop="75665"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.931"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.931">
            <gDNA_exon_boundary e_start="76117" e_stop="75665" e_length="453"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76117" stop="75792"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393076" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76117" stop="75809"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393075" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76117" stop="75964"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392727" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76116" stop="75665"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200845" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAATATATATGTTTTTTCTCTCGCTTTATACAAAAACGGAAACACAATATATACACTTCTGTTGTATAAAGCTAGAGAAAATTGTATTTCACTGCAATTGCATAATTCGCAATTGTGTAATTCGTTGGCCTTTTCCTCTGCAATATCTGAAGTGAACTGTTTGTAAATTGTATAATTAAGTGTATAACACGAAGATATATATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAAAAACAAAATTTATACACTTTTGTGTATAAAGCGAGAGAGGCGAGCGAGAATGGAGAGTGGCGAGCGAGATTTTTGGGAGAGAGACGCTTGACAAACTTTAACTAACGTTTGCTATGGAGCACAATTAAATCAAACCCTAACTACTCCATTTATTTTAGGTTATTAG</gDNA_template>
            <first_frame> *  N  V  C  I  L  H  N  Y  K  C  I  A  R  I  Y  M  F  F  L  S  L  Y  T  K  T  E  T  Q  Y  I  H  F  C  C  I  K  L  E  K  I  V  F  H  C  N  C  I  I  R  N  C  V  I  R  W  P  F  P  L  Q  Y  L  K  *  T  V  C  K  L  Y  N  *  V  Y  N  T  K  I  Y  I  F  A  C  V  Y  T  I  F  S  R  F  I  Q  N  K  N  K  I  Y  T  L  L  C  I  K  R  E  R  R  A  R  M  E  S  G  E  R  D  F  W  E  R  D  A  *  Q  T  L  T  N  V  C  Y  G  A  Q  L  N  Q  T  L  T  T  P  F  I  L  G  Y  * </first_frame>
            <second_frame>  K  M  Y  V  Y  C  I  I  I  S  V  *  Q  E  Y  I  C  F  F  S  R  F  I  Q  K  R  K  H  N  I  Y  T  S  V  V  *  S  *  R  K  L  Y  F  T  A  I  A  *  F  A  I  V  *  F  V  G  L  F  L  C  N  I  *  S  E  L  F  V  N  C  I  I  K  C  I  T  R  R  Y  I  F  L  H  V  Y  I  Q  F  S  L  A  L  Y  K  T  K  T  K  F  I  H  F  C  V  *  S  E  R  G  E  R  E  W  R  V  A  S  E  I  F  G  R  E  T  L  D  K  L  *  L  T  F  A  M  E  H  N  *  I  K  P  *  L  L  H  L  F  *  V  I   </second_frame>
            <third_frame>   K  C  M  Y  I  A  *  L  *  V  Y  S  K  N  I  Y  V  F  S  L  A  L  Y  K  N  G  N  T  I  Y  T  L  L  L  Y  K  A  R  E  N  C  I  S  L  Q  L  H  N  S  Q  L  C  N  S  L  A  F  S  S  A  I  S  E  V  N  C  L  *  I  V  *  L  S  V  *  H  E  D  I  Y  F  C  M  C  I  Y  N  F  L  S  L  Y  T  K  Q  K  Q  N  L  Y  T  F  V  Y  K  A  R  E  A  S  E  N  G  E  W  R  A  R  F  L  G  E  R  R  L  T  N  F  N  *  R  L  L  W  S  T  I  K  S  N  P  N  Y  S  I  Y  F  R  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0172H10.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="82845" PGL_stop="81316"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82845" e_stop="81316"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="82845" e_stop="81316" e_length="1530"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82845" stop="81316"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745974" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAATTCAGTGCTCGCTCTCTAAAAAGGCAAAGGTTTTCGTCTCATCTGTCACACAACACAACACACATTCTTCATCTTTTCTCCGCCGCTTCAAAAATTTTCATACAAAAACCAATTAGCTTTTCAGCAGAGAATTAATGGAGTTATCAGCTCAACAACCACCAGCAGCGCTTAACCAAAATCGACAGCAAGATCAACAGCAGGCCGCGTGGTTTATCAGAGCAGTACTGGCGAAGATCATCATGTATTGTAGCAACAACAAAGGTGGTACTGGCAGAGTAAGCACCAGATCCAAAATGCAAGCAGAAATGGGCAAGCGTTACTATATGATTTTACTGGTTATCAATTACATGTGTCTCTTCTTGGGTTCCGTTTCGTCTAGTCTGCTTTCGAAATTCTACTTCAATCACAAAGGTGGCAGTAGATGGGTTTCCACTTGGGTACAATGTGCTGGTTTTCCTCTTCTTCTATTCCCAATCTGCTTTTTCAGAATTTTCACCGACAGAAAATTGTTTTCTGGGTTCACCCCTAAAATCATCGCCCTCTCAATTCTCATCGGGTTGTTGTTGGGGGTTAACAATCTTCTTTTCTCTTGGGGGAATTCTTATCTTCCTGTTTCAACGAATTCTCTGGTTTTGTCTACTCAATTGGCCTTTACCCTCGTTACTTCCATGATTATCGTCAAGCAAAAAATCACATACCCCAATCTGAACTGTGTCGTCGTTCTCACCCTCAGTTCGGTCATATTAGCCCTGAGTTCAAGTCACGACAAACCGATTGGATTAACAAAGGCGAAGTACTTCAAAGGCTTTTTCTCAACCGTAGGTGCAGGATTGATGTTCGCTCTTTACCTCCCTGTCATGGAGAAGATATACCAAAGAGTTAACTGCTACGCCATGGTAGTGGAAATGCAGCTGGTCATGGAGATAGCGGCGACGGTGTTGGCCACGGTGGGTATGGCAGCGGACGGCGGTTTCTCTGAGATGAAGAGGGAGAGCTTGAAGGTGTTCGATTTAGGACCGAAAGCGTACTGGCTGACGGTGGGGTTTAATGTGGTGACGTGGCAGGTGTGTTTCATGGGTACGGCAGGGATGGTGTTTTTGACGACGTCGTTAACTGGAGGTGTATGCATGACGGCGCTGATGGGGATAAACGTGTTGGGTGGAGTATTAGTTTACGGTGATTATTTCAGTGGGCTTAAAGCTGTGTCGACTTCGCTATGTGTATGGGGATTTTGTTCATATATTTACGGCATTTATATGAACATGAAGGAAGAAGACGAGAATAGCATAGAGAAGAATGTGAAGAAGATGAACAGTGATCATATTATGGAACTTGCAGAGATTGTTGTTACGCATAACGCCTCAGGGTGATCACGTGACATCTCTCTCTATTTTGTTTTCGTTTTATTCGAATATATTAGGGGTATTCTGGAGCTGGTTTATAACTGGCAAGTGTTTGTATTCAAGTTAAGTAATGGAAAAGTAAGGAGTAATGATTTATGGTTTTGACCAAAAACAAAAAATGGAA</gDNA_template>
            <first_frame> Q  F  S  A  R  S  L  K  R  Q  R  F  S  S  H  L  S  H  N  T  T  H  I  L  H  L  F  S  A  A  S  K  I  F  I  Q  K  P  I  S  F  S  A  E  N  *  W  S  Y  Q  L  N  N  H  Q  Q  R  L  T  K  I  D  S  K  I  N  S  R  P  R  G  L  S  E  Q  Y  W  R  R  S  S  C  I  V  A  T  T  K  V  V  L  A  E  *  A  P  D  P  K  C  K  Q  K  W  A  S  V  T  I  *  F  Y  W  L  S  I  T  C  V  S  S  W  V  P  F  R  L  V  C  F  R  N  S  T  S  I  T  K  V  A  V  D  G  F  P  L  G  Y  N  V  L  V  F  L  F  F  Y  S  Q  S  A  F  S  E  F  S  P  T  E  N  C  F  L  G  S  P  L  K  S  S  P  S  Q  F  S  S  G  C  C  W  G  L  T  I  F  F  S  L  G  G  I  L  I  F  L  F  Q  R  I  L  W  F  C  L  L  N  W  P  L  P  S  L  L  P  *  L  S  S  S  K  K  S  H  T  P  I  *  T  V  S  S  F  S  P  S  V  R  S  Y  *  P  *  V  Q  V  T  T  N  R  L  D  *  Q  R  R  S  T  S  K  A  F  S  Q  P  *  V  Q  D  *  C  S  L  F  T  S  L  S  W  R  R  Y  T  K  E  L  T  A  T  P  W  *  W  K  C  S  W  S  W  R  *  R  R  R  C  W  P  R  W  V  W  Q  R  T  A  V  S  L  R  *  R  G  R  A  *  R  C  S  I  *  D  R  K  R  T  G  *  R  W  G  L  M  W  *  R  G  R  C  V  S  W  V  R  Q  G  W  C  F  *  R  R  R  *  L  E  V  Y  A  *  R  R  *  W  G  *  T  C  W  V  E  Y  *  F  T  V  I  I  S  V  G  L  K  L  C  R  L  R  Y  V  Y  G  D  F  V  H  I  F  T  A  F  I  *  T  *  R  K  K  T  R  I  A  *  R  R  M  *  R  R  *  T  V  I  I  L  W  N  L  Q  R  L  L  L  R  I  T  P  Q  G  D  H  V  T  S  L  S  I  L  F  S  F  Y  S  N  I  L  G  V  F  W  S  W  F  I  T  G  K  C  L  Y  S  S  *  V  M  E  K  *  G  V  M  I  Y  G  F  D  Q  K  Q  K  M  E </first_frame>
            <second_frame>  N  S  V  L  A  L  *  K  G  K  G  F  R  L  I  C  H  T  T  Q  H  T  F  F  I  F  S  P  P  L  Q  K  F  S  Y  K  N  Q  L  A  F  Q  Q  R  I  N  G  V  I  S  S  T  T  T  S  S  A  *  P  K  S  T  A  R  S  T  A  G  R  V  V  Y  Q  S  S  T  G  E  D  H  H  V  L  *  Q  Q  Q  R  W  Y  W  Q  S  K  H  Q  I  Q  N  A  S  R  N  G  Q  A  L  L  Y  D  F  T  G  Y  Q  L  H  V  S  L  L  G  F  R  F  V  *  S  A  F  E  I  L  L  Q  S  Q  R  W  Q  *  M  G  F  H  L  G  T  M  C  W  F  S  S  S  S  I  P  N  L  L  F  Q  N  F  H  R  Q  K  I  V  F  W  V  H  P  *  N  H  R  P  L  N  S  H  R  V  V  V  G  G  *  Q  S  S  F  L  L  G  E  F  L  S  S  C  F  N  E  F  S  G  F  V  Y  S  I  G  L  Y  P  R  Y  F  H  D  Y  R  Q  A  K  N  H  I  P  Q  S  E  L  C  R  R  S  H  P  Q  F  G  H  I  S  P  E  F  K  S  R  Q  T  D  W  I  N  K  G  E  V  L  Q  R  L  F  L  N  R  R  C  R  I  D  V  R  S  L  P  P  C  H  G  E  D  I  P  K  S  *  L  L  R  H  G  S  G  N  A  A  G  H  G  D  S  G  D  G  V  G  H  G  G  Y  G  S  G  R  R  F  L  *  D  E  E  G  E  L  E  G  V  R  F  R  T  E  S  V  L  A  D  G  G  V  *  C  G  D  V  A  G  V  F  H  G  Y  G  R  D  G  V  F  D  D  V  V  N  W  R  C  M  H  D  G  A  D  G  D  K  R  V  G  W  S  I  S  L  R  *  L  F  Q  W  A  *  S  C  V  D  F  A  M  C  M  G  I  L  F  I  Y  L  R  H  L  Y  E  H  E  G  R  R  R  E  *  H  R  E  E  C  E  E  D  E  Q  *  S  Y  Y  G  T  C  R  D  C  C  Y  A  *  R  L  R  V  I  T  *  H  L  S  L  F  C  F  R  F  I  R  I  Y  *  G  Y  S  G  A  G  L  *  L  A  S  V  C  I  Q  V  K  *  W  K  S  K  E  *  *  F  M  V  L  T  K  N  K  K  W   </second_frame>
            <third_frame>   I  Q  C  S  L  S  K  K  A  K  V  F  V  S  S  V  T  Q  H  N  T  H  S  S  S  F  L  R  R  F  K  N  F  H  T  K  T  N  *  L  F  S  R  E  L  M  E  L  S  A  Q  Q  P  P  A  A  L  N  Q  N  R  Q  Q  D  Q  Q  Q  A  A  W  F  I  R  A  V  L  A  K  I  I  M  Y  C  S  N  N  K  G  G  T  G  R  V  S  T  R  S  K  M  Q  A  E  M  G  K  R  Y  Y  M  I  L  L  V  I  N  Y  M  C  L  F  L  G  S  V  S  S  S  L  L  S  K  F  Y  F  N  H  K  G  G  S  R  W  V  S  T  W  V  Q  C  A  G  F  P  L  L  L  F  P  I  C  F  F  R  I  F  T  D  R  K  L  F  S  G  F  T  P  K  I  I  A  L  S  I  L  I  G  L  L  L  G  V  N  N  L  L  F  S  W  G  N  S  Y  L  P  V  S  T  N  S  L  V  L  S  T  Q  L  A  F  T  L  V  T  S  M  I  I  V  K  Q  K  I  T  Y  P  N  L  N  C  V  V  V  L  T  L  S  S  V  I  L  A  L  S  S  S  H  D  K  P  I  G  L  T  K  A  K  Y  F  K  G  F  F  S  T  V  G  A  G  L  M  F  A  L  Y  L  P  V  M  E  K  I  Y  Q  R  V  N  C  Y  A  M  V  V  E  M  Q  L  V  M  E  I  A  A  T  V  L  A  T  V  G  M  A  A  D  G  G  F  S  E  M  K  R  E  S  L  K  V  F  D  L  G  P  K  A  Y  W  L  T  V  G  F  N  V  V  T  W  Q  V  C  F  M  G  T  A  G  M  V  F  L  T  T  S  L  T  G  G  V  C  M  T  A  L  M  G  I  N  V  L  G  G  V  L  V  Y  G  D  Y  F  S  G  L  K  A  V  S  T  S  L  C  V  W  G  F  C  S  Y  I  Y  G  I  Y  M  N  M  K  E  E  D  E  N  S  I  E  K  N  V  K  K  M  N  S  D  H  I  M  E  L  A  E  I  V  V  T  H  N  A  S  G  *  S  R  D  I  S  L  Y  F  V  F  V  L  F  E  Y  I  R  G  I  L  E  L  V  Y  N  W  Q  V  F  V  F  K  L  S  N  G  K  V  R  S  N  D  L  W  F  *  P  K  T  K  N  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82726" stop="81473"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1251</number_coding_nucleotides>
                  <number_encoded_amino_acids>417</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LFSRELMELSAQQPPAALNQNRQQDQQQAAWFIRAVLAKIIMYCSNNKGGTGRVSTRSKMQAEMGKRYYMILLVINYMCLFLGSVSSSLLSKFYFNHKGGSRWVSTWVQCAGFPLLLFPICFFRIFTDRKLFSGFTPKIIALSILIGLLLGVNNLLFSWGNSYLPVSTNSLVLSTQLAFTLVTSMIIVKQKITYPNLNCVVVLTLSSVILALSSSHDKPIGLTKAKYFKGFFSTVGAGLMFALYLPVMEKIYQRVNCYAMVVEMQLVMEIAATVLATVGMAADGGFSEMKRESLKVFDLGPKAYWLTVGFNVVTWQVCFMGTAGMVFLTTSLTGGVCMTALMGINVLGGVLVYGDYFSGLKAVSTSLCVWGFCSYIYGIYMNMKEEDENSIEKNVKKMNSDHIMELAEIVVTHNASG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="87605" PGL_stop="88886"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="87605" e_stop="87718"/>
            <exon e_start="87793" e_stop="87945"/>
            <exon e_start="88029" e_stop="88154"/>
            <exon e_start="88234" e_stop="88583"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.994" e_score="0.991"/>
          <exon-intron don_prob="0.984" acc_prob="0.791" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.671" e_score="1.000"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="87605" e_stop="87718" e_length="114"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.994">
            <gDNA_intron_boundary i_start="87719" i_stop="87792" i_length="74"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="87793" e_stop="87945" e_length="153"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.791">
            <gDNA_intron_boundary i_start="87946" i_stop="88028" i_length="83"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="88029" e_stop="88154" e_length="126"/>
          </exon>
          <intron i_serial="3" don_prob="0.978" acc_prob="0.671">
            <gDNA_intron_boundary i_start="88155" i_stop="88233" i_length="79"/>
          </intron>
          <exon e_serial="4" e_score="0.989">
            <gDNA_exon_boundary e_start="88234" e_stop="88583" e_length="350"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87605" stop="87718"/>
              <exon start="87793" stop="87945"/>
              <exon start="88029" stop="88154"/>
              <exon start="88234" stop="88583"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E724432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87648" stop="87718"/>
              <exon start="87793" stop="87945"/>
              <exon start="88029" stop="88154"/>
              <exon start="88234" stop="88262"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279287" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATCCCTCTTTGAGAAATTTGAAGATCAAGAAATGGACAGCTATGGCGGTGGCGGGTACTTCGTCGACGAGAAAGCCGTTAGGGTCGAAAACATCTTCTTGGAGTTCCTCAAGAG : TTTTCGAGTGGATGCGAACTCACGTGAGCCATTTTACGAGTCGGAGATCGAAGCCATGAGACCTAATGAGTCCAACACAATGTTCATTGATTTCTCTCACGTTATGCGCTTCAACGATATTCTTCAGAAGGCCATTTCCGATGAGTTTCTCAG : GTTTGAATCCTATCTGAAAAATGCTTGCAAGAGATTTGTGATGGAATTGAAGCCAACTTTCATCACTGATGATAATCCTAACAAGGACATCAACGTCGCATTTTACAATCTTCCGCTGATTAATAG : ATTGAGAGAGTTGACTACCTCAGAGATAGGGAAATTGGTGTCGGTGACTGGAGTGGTAACTCGTACCAGTGAGGTCCGACCAGAGCTTCTACAGGGAACCTTCAAATGCTTGGACTGTGGAACTGTGATCAAGAATGTTGAACAGCAATTCAAATACACCGAGGTTTAGTTTCCTAGTCATTCATCTGTCAATAAGAGGCCATTTTTATTGTTGTTGTTGTTGGTTCATGTTTGTGCAGTAATTGACCTTGTTAGTTGTGAACTCTCTCAAAGATGGAGGGTATACCTTTTTTTTCTAATGTAAAGCACAATGGGAACTTATTTCATGCTATGATTAACAATATTAACAA</gDNA_template>
            <first_frame> I  P  L  *  E  I  *  R  S  R  N  G  Q  L  W  R  W  R  V  L  R  R  R  E  S  R  *  G  R  K  H  L  L  G  V  P  Q  E  :  F  S  S  G  C  E  L  T  *  A  I  L  R  V  G  D  R  S  H  E  T  *  *  V  Q  H  N  V  H  *  F  L  S  R  Y  A  L  Q  R  Y  S  S  E  G  H  F  R  *  V  S  Q  :  V  *  I  L  S  E  K  C  L  Q  E  I  C  D  G  I  E  A  N  F  H  H  *  *  *  S  *  Q  G  H  Q  R  R  I  L  Q  S  S  A  D  *  *  :  I  E  R  V  D  Y  L  R  D  R  E  I  G  V  G  D  W  S  G  N  S  Y  Q  *  G  P  T  R  A  S  T  G  N  L  Q  M  L  G  L  W  N  C  D  Q  E  C  *  T  A  I  Q  I  H  R  G  L  V  S  *  S  F  I  C  Q  *  E  A  I  F  I  V  V  V  V  G  S  C  L  C  S  N  *  P  C  *  L  *  T  L  S  K  M  E  G  I  P  F  F  S  N  V  K  H  N  G  N  L  F  H  A  M  I  N  N  I  N   </first_frame>
            <second_frame>  S  L  F  E  K  F  E  D  Q  E  M  D  S  Y  G  G  G  G  Y  F  V  D  E  K  A  V  R  V  E  N  I  F  L  E  F  L  K  S :   F  R  V  D  A  N  S  R  E  P  F  Y  E  S  E  I  E  A  M  R  P  N  E  S  N  T  M  F  I  D  F  S  H  V  M  R  F  N  D  I  L  Q  K  A  I  S  D  E  F  L  R :   F  E  S  Y  L  K  N  A  C  K  R  F  V  M  E  L  K  P  T  F  I  T  D  D  N  P  N  K  D  I  N  V  A  F  Y  N  L  P  L  I  N  R :   L  R  E  L  T  T  S  E  I  G  K  L  V  S  V  T  G  V  V  T  R  T  S  E  V  R  P  E  L  L  Q  G  T  F  K  C  L  D  C  G  T  V  I  K  N  V  E  Q  Q  F  K  Y  T  E  V  *  F  P  S  H  S  S  V  N  K  R  P  F  L  L  L  L  L  L  V  H  V  C  A  V  I  D  L  V  S  C  E  L  S  Q  R  W  R  V  Y  L  F  F  L  M  *  S  T  M  G  T  Y  F  M  L  *  L  T  I  L  T  </second_frame>
            <third_frame>   P  S  L  R  N  L  K  I  K  K  W  T  A  M  A  V  A  G  T  S  S  T  R  K  P  L  G  S  K  T  S  S  W  S  S  S  R   : V  F  E  W  M  R  T  H  V  S  H  F  T  S  R  R  S  K  P  *  D  L  M  S  P  T  Q  C  S  L  I  S  L  T  L  C  A  S  T  I  F  F  R  R  P  F  P  M  S  F  S   : G  L  N  P  I  *  K  M  L  A  R  D  L  *  W  N  *  S  Q  L  S  S  L  M  I  I  L  T  R  T  S  T  S  H  F  T  I  F  R  *  L  I   : D  *  E  S  *  L  P  Q  R  *  G  N  W  C  R  *  L  E  W  *  L  V  P  V  R  S  D  Q  S  F  Y  R  E  P  S  N  A  W  T  V  E  L  *  S  R  M  L  N  S  N  S  N  T  P  R  F  S  F  L  V  I  H  L  S  I  R  G  H  F  Y  C  C  C  C  W  F  M  F  V  Q  *  L  T  L  L  V  V  N  S  L  K  D  G  G  Y  T  F  F  F  *  C  K  A  Q  W  E  L  I  S  C  Y  D  *  Q  Y  *  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="87606" stop="87718"/>
                    <exon start="87793" stop="87945"/>
                    <exon start="88029" stop="88154"/>
                    <exon start="88234" stop="88402"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>558</number_coding_nucleotides>
                  <number_encoded_amino_acids>186</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLFEKFEDQEMDSYGGGGYFVDEKAVRVENIFLEFLKSFRVDANSREPFYESEIEAMRPNESNTMFIDFSHVMRFNDILQKAISDEFLRFESYLKNACKRFVMELKPTFITDDNPNKDINVAFYNLPLINRLRELTTSEIGKLVSVTGVVTRTSEVRPELLQGTFKCLDCGTVIKNVEQQFKYTEV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="87618" e_stop="87718"/>
            <exon e_start="87793" e_stop="87945"/>
            <exon e_start="88029" e_stop="88154"/>
            <exon e_start="88234" e_stop="88396"/>
            <exon e_start="88790" e_stop="88886"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.791" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.671" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.796" e_score="1.000"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="87618" e_stop="87718" e_length="101"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.994">
            <gDNA_intron_boundary i_start="87719" i_stop="87792" i_length="74"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="87793" e_stop="87945" e_length="153"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.791">
            <gDNA_intron_boundary i_start="87946" i_stop="88028" i_length="83"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="88029" e_stop="88154" e_length="126"/>
          </exon>
          <intron i_serial="3" don_prob="0.978" acc_prob="0.671">
            <gDNA_intron_boundary i_start="88155" i_stop="88233" i_length="79"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="88234" e_stop="88396" e_length="163"/>
          </exon>
          <intron i_serial="4" don_prob="0.988" acc_prob="0.796">
            <gDNA_intron_boundary i_start="88397" i_stop="88789" i_length="393"/>
          </intron>
          <exon e_serial="5" e_score="0.990">
            <gDNA_exon_boundary e_start="88790" e_stop="88886" e_length="97"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87618" stop="87718"/>
              <exon start="87793" stop="87945"/>
              <exon start="88029" stop="88154"/>
              <exon start="88234" stop="88396"/>
              <exon start="88790" stop="88886"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347653" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87648" stop="87718"/>
              <exon start="87793" stop="87945"/>
              <exon start="88029" stop="88154"/>
              <exon start="88234" stop="88262"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279287" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAATTTGAAGATCAAGAAATGGACAGCTATGGCGGTGGCGGGTACTTCGTCGACGAGAAAGCCGTTAGGGTCGAAAACATCTTCTTGGAGTTCCTCAAGAG : TTTTCGAGTGGATGCGAACTCACGTGAGCCATTTTACGAGTCGGAGATCGAAGCCATGAGACCTAATGAGTCCAACACAATGTTCATTGATTTCTCTCACGTTATGCGCTTCAACGATATTCTTCAGAAGGCCATTTCCGATGAGTTTCTCAG : GTTTGAATCCTATCTGAAAAATGCTTGCAAGAGATTTGTGATGGAATTGAAGCCAACTTTCATCACTGATGATAATCCTAACAAGGACATCAACGTCGCATTTTACAATCTTCCGCTGATTAATAG : ATTGAGAGAGTTGACTACCTCAGAGATAGGGAAATTGGTGTCGGTGACTGGAGTGGTAACTCGTACCAGTGAGGTCCGACCAGAGCTTCTACAGGGAACCTTCAAATGCTTGGACTGTGGAACTGTGATCAAGAATGTTGAACAGCAATTCAAATACACCGAG : CCTATAATTTGTATGAATGCGACATGTCAAAACAAAGCAAGATGGGCATTACTCAGGCAAGAGAGCAAATTTGCAGACTGGCAGAGGGTCCGAATGC</gDNA_template>
            <first_frame> K  F  E  D  Q  E  M  D  S  Y  G  G  G  G  Y  F  V  D  E  K  A  V  R  V  E  N  I  F  L  E  F  L  K  S :   F  R  V  D  A  N  S  R  E  P  F  Y  E  S  E  I  E  A  M  R  P  N  E  S  N  T  M  F  I  D  F  S  H  V  M  R  F  N  D  I  L  Q  K  A  I  S  D  E  F  L  R :   F  E  S  Y  L  K  N  A  C  K  R  F  V  M  E  L  K  P  T  F  I  T  D  D  N  P  N  K  D  I  N  V  A  F  Y  N  L  P  L  I  N  R :   L  R  E  L  T  T  S  E  I  G  K  L  V  S  V  T  G  V  V  T  R  T  S  E  V  R  P  E  L  L  Q  G  T  F  K  C  L  D  C  G  T  V  I  K  N  V  E  Q  Q  F  K  Y  T  E  :  P  I  I  C  M  N  A  T  C  Q  N  K  A  R  W  A  L  L  R  Q  E  S  K  F  A  D  W  Q  R  V  R  M  </first_frame>
            <second_frame>  N  L  K  I  K  K  W  T  A  M  A  V  A  G  T  S  S  T  R  K  P  L  G  S  K  T  S  S  W  S  S  S  R   : V  F  E  W  M  R  T  H  V  S  H  F  T  S  R  R  S  K  P  *  D  L  M  S  P  T  Q  C  S  L  I  S  L  T  L  C  A  S  T  I  F  F  R  R  P  F  P  M  S  F  S   : G  L  N  P  I  *  K  M  L  A  R  D  L  *  W  N  *  S  Q  L  S  S  L  M  I  I  L  T  R  T  S  T  S  H  F  T  I  F  R  *  L  I   : D  *  E  S  *  L  P  Q  R  *  G  N  W  C  R  *  L  E  W  *  L  V  P  V  R  S  D  Q  S  F  Y  R  E  P  S  N  A  W  T  V  E  L  *  S  R  M  L  N  S  N  S  N  T  P  S :   L  *  F  V  *  M  R  H  V  K  T  K  Q  D  G  H  Y  S  G  K  R  A  N  L  Q  T  G  R  G  S  E  C </second_frame>
            <third_frame>   I  *  R  S  R  N  G  Q  L  W  R  W  R  V  L  R  R  R  E  S  R  *  G  R  K  H  L  L  G  V  P  Q  E  :  F  S  S  G  C  E  L  T  *  A  I  L  R  V  G  D  R  S  H  E  T  *  *  V  Q  H  N  V  H  *  F  L  S  R  Y  A  L  Q  R  Y  S  S  E  G  H  F  R  *  V  S  Q  :  V  *  I  L  S  E  K  C  L  Q  E  I  C  D  G  I  E  A  N  F  H  H  *  *  *  S  *  Q  G  H  Q  R  R  I  L  Q  S  S  A  D  *  *  :  I  E  R  V  D  Y  L  R  D  R  E  I  G  V  G  D  W  S  G  N  S  Y  Q  *  G  P  T  R  A  S  T  G  N  L  Q  M  L  G  L  W  N  C  D  Q  E  C  *  T  A  I  Q  I  H  R   : A  Y  N  L  Y  E  C  D  M  S  K  Q  S  K  M  G  I  T  Q  A  R  E  Q  I  C  R  L  A  E  G  P  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="87618" stop="87718"/>
                    <exon start="87793" stop="87945"/>
                    <exon start="88029" stop="88154"/>
                    <exon start="88234" stop="88396"/>
                    <exon start="88790" stop="88885"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>639</number_coding_nucleotides>
                  <number_encoded_amino_acids>213</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KFEDQEMDSYGGGGYFVDEKAVRVENIFLEFLKSFRVDANSREPFYESEIEAMRPNESNTMFIDFSHVMRFNDILQKAISDEFLRFESYLKNACKRFVMELKPTFITDDNPNKDINVAFYNLPLINRLRELTTSEIGKLVSVTGVVTRTSEVRPELLQGTFKCLDCGTVIKNVEQQFKYTEPIICMNATCQNKARWALLRQESKFADWQRVRM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="88937" PGL_stop="90773"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88937" e_stop="88983"/>
            <exon e_start="89072" e_stop="89267"/>
            <exon e_start="89460" e_stop="89537"/>
            <exon e_start="89958" e_stop="90187"/>
            <exon e_start="90272" e_stop="90386"/>
            <exon e_start="90715" e_stop="90773"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="0.894"/>
          <exon-intron don_prob="0.971" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.985" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.894">
            <gDNA_exon_boundary e_start="88937" e_stop="88983" e_length="47"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="88984" i_stop="89071" i_length="88"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="89072" e_stop="89267" e_length="196"/>
          </exon>
          <intron i_serial="2" don_prob="0.971" acc_prob="0.999">
            <gDNA_intron_boundary i_start="89268" i_stop="89459" i_length="192"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="89460" e_stop="89537" e_length="78"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.964">
            <gDNA_intron_boundary i_start="89538" i_stop="89957" i_length="420"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="89958" e_stop="90187" e_length="230"/>
          </exon>
          <intron i_serial="4" don_prob="0.982" acc_prob="0.000">
            <gDNA_intron_boundary i_start="90188" i_stop="90271" i_length="84"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="90272" e_stop="90386" e_length="115"/>
          </exon>
          <intron i_serial="5" don_prob="0.986" acc_prob="0.985">
            <gDNA_intron_boundary i_start="90387" i_stop="90714" i_length="328"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="90715" e_stop="90773" e_length="59"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88937" stop="88983"/>
              <exon start="89072" stop="89267"/>
              <exon start="89460" stop="89537"/>
              <exon start="89958" stop="90187"/>
              <exon start="90272" stop="90386"/>
              <exon start="90715" stop="90773"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374565" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTCATTCTACGCCATGACATTGTGGAACAAGCCAGAGCAGGTGACAC : GGTCATATTTACTGGTACCGTTGTGGTGATACCTGACATACTTGCACTTGCCTCTCCTGGGGAGAGAGCTGAATGTCGCCGTGATGCATCTCAGCGAAAGAATGGTACTGGTGCGCAAGAAGGTGTGAAGGGTCTTCGAGCCTTGGGCGTTAGGGATCTCTCGTATCGATTAGCATTTATAGCTAACTCGGTTCAG : ATATGTGATGGTCGAAGGGACAATGACATCAGAAATAGAAGGAGAGATGTTGATGAAGAAGAGAGTCCCCAGTTCATG : ACTGAAGAGCTAGAAGACATCCAACGAATGAGGAAAGTTCCGGATTTTTTCAATAAGCTTGTTGAGAGTGTTGCTCCAACTGTTTTTGGTCACTCAGATATCAAGAGGGCAATACTGCTCATGCTTTTGGGTGGTGTTCACAAGTTTACTCATGAAGGCATTAATTTAAGAGGGGACATCAATGTTTGCATTGTTGGAGATCCTAGCTGTGCAAAATCTCAGTTCCTCAA : ATACACAGCAGGTCTGGTTCCTCGATCTGTCTATACATCAGGGAAATCCTCGTCTGCTGCTGGGTTGACAGCAACAGTGGCCAAAGAACCAGAAACTGGAGAATTCTGTATTGAG : GCTGGTGCACTGATGCTTGCAGACAATGGTATCTGTTGTATTGATGAATTTGACAAAAT</gDNA_template>
            <first_frame> V  I  L  R  H  D  I  V  E  Q  A  R  A  G  D  T :   V  I  F  T  G  T  V  V  V  I  P  D  I  L  A  L  A  S  P  G  E  R  A  E  C  R  R  D  A  S  Q  R  K  N  G  T  G  A  Q  E  G  V  K  G  L  R  A  L  G  V  R  D  L  S  Y  R  L  A  F  I  A  N  S  V  Q  :  I  C  D  G  R  R  D  N  D  I  R  N  R  R  R  D  V  D  E  E  E  S  P  Q  F  M  :  T  E  E  L  E  D  I  Q  R  M  R  K  V  P  D  F  F  N  K  L  V  E  S  V  A  P  T  V  F  G  H  S  D  I  K  R  A  I  L  L  M  L  L  G  G  V  H  K  F  T  H  E  G  I  N  L  R  G  D  I  N  V  C  I  V  G  D  P  S  C  A  K  S  Q  F  L  K :   Y  T  A  G  L  V  P  R  S  V  Y  T  S  G  K  S  S  S  A  A  G  L  T  A  T  V  A  K  E  P  E  T  G  E  F  C  I  E  :  A  G  A  L  M  L  A  D  N  G  I  C  C  I  D  E  F  D  K   </first_frame>
            <second_frame>  S  F  Y  A  M  T  L  W  N  K  P  E  Q  V  T   : R  S  Y  L  L  V  P  L  W  *  Y  L  T  Y  L  H  L  P  L  L  G  R  E  L  N  V  A  V  M  H  L  S  E  R  M  V  L  V  R  K  K  V  *  R  V  F  E  P  W  A  L  G  I  S  R  I  D  *  H  L  *  L  T  R  F  R :   Y  V  M  V  E  G  T  M  T  S  E  I  E  G  E  M  L  M  K  K  R  V  P  S  S  * :   L  K  S  *  K  T  S  N  E  *  G  K  F  R  I  F  S  I  S  L  L  R  V  L  L  Q  L  F  L  V  T  Q  I  S  R  G  Q  Y  C  S  C  F  W  V  V  F  T  S  L  L  M  K  A  L  I  *  E  G  T  S  M  F  A  L  L  E  I  L  A  V  Q  N  L  S  S  S   : N  T  Q  Q  V  W  F  L  D  L  S  I  H  Q  G  N  P  R  L  L  L  G  *  Q  Q  Q  W  P  K  N  Q  K  L  E  N  S  V  L  R :   L  V  H  *  C  L  Q  T  M  V  S  V  V  L  M  N  L  T  K  </second_frame>
            <third_frame>   H  S  T  P  *  H  C  G  T  S  Q  S  R  *  H  :  G  H  I  Y  W  Y  R  C  G  D  T  *  H  T  C  T  C  L  S  W  G  E  S  *  M  S  P  *  C  I  S  A  K  E  W  Y  W  C  A  R  R  C  E  G  S  S  S  L  G  R  *  G  S  L  V  S  I  S  I  Y  S  *  L  G  S   : D  M  *  W  S  K  G  Q  *  H  Q  K  *  K  E  R  C  *  *  R  R  E  S  P  V  H   : D  *  R  A  R  R  H  P  T  N  E  E  S  S  G  F  F  Q  *  A  C  *  E  C  C  S  N  C  F  W  S  L  R  Y  Q  E  G  N  T  A  H  A  F  G  W  C  S  Q  V  Y  S  *  R  H  *  F  K  R  G  H  Q  C  L  H  C  W  R  S  *  L  C  K  I  S  V  P  Q  :  I  H  S  R  S  G  S  S  I  C  L  Y  I  R  E  I  L  V  C  C  W  V  D  S  N  S  G  Q  R  T  R  N  W  R  I  L  Y  *   : G  W  C  T  D  A  C  R  Q  W  Y  L  L  Y  *  *  I  *  Q  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88937" stop="88983"/>
                    <exon start="89072" stop="89267"/>
                    <exon start="89460" stop="89537"/>
                    <exon start="89958" stop="90187"/>
                    <exon start="90272" stop="90386"/>
                    <exon start="90715" stop="90771"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>723</number_coding_nucleotides>
                  <number_encoded_amino_acids>241</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VILRHDIVEQARAGDTVIFTGTVVVIPDILALASPGERAECRRDASQRKNGTGAQEGVKGLRALGVRDLSYRLAFIANSVQICDGRRDNDIRNRRRDVDEEESPQFMTEELEDIQRMRKVPDFFNKLVESVAPTVFGHSDIKRAILLMLLGGVHKFTHEGINLRGDINVCIVGDPSCAKSQFLKYTAGLVPRSVYTSGKSSSAAGLTATVAKEPETGEFCIEAGALMLADNGICCIDEFDK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="91893" PGL_stop="93162"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="91893" e_stop="92001"/>
            <exon e_start="92090" e_stop="92215"/>
            <exon e_start="92499" e_stop="92629"/>
            <exon e_start="92720" e_stop="93162"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.990" acc_prob="0.987" e_score="0.936"/>
          <exon-intron don_prob="0.312" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.984" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.936">
            <gDNA_exon_boundary e_start="91893" e_stop="92001" e_length="109"/>
          </exon>
          <intron i_serial="1" don_prob="0.990" acc_prob="0.987">
            <gDNA_intron_boundary i_start="92002" i_stop="92089" i_length="88"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92090" e_stop="92215" e_length="126"/>
          </exon>
          <intron i_serial="2" don_prob="0.312" acc_prob="0.974">
            <gDNA_intron_boundary i_start="92216" i_stop="92498" i_length="283"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="92499" e_stop="92629" e_length="131"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.984">
            <gDNA_intron_boundary i_start="92630" i_stop="92719" i_length="90"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="92720" e_stop="93162" e_length="443"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91893" stop="92001"/>
              <exon start="92090" stop="92215"/>
              <exon start="92499" stop="92629"/>
              <exon start="92720" stop="93063"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314603" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91972" stop="92001"/>
              <exon start="92090" stop="92215"/>
              <exon start="92499" stop="92629"/>
              <exon start="92720" stop="93162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374566" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92159" stop="92215"/>
              <exon start="92499" stop="92629"/>
              <exon start="92720" stop="93047"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353902" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92160" stop="92215"/>
              <exon start="92499" stop="92629"/>
              <exon start="92720" stop="93162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204232" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92815" stop="93160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216328" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCCAAAATGAGAATCCCGAGGATGGTGTTGGTGATACTCAAAATGGTACTGGTCAAAGGGAAACTGAACCAACTGAAGCTCCGGCTGAGTCAGTATCTGGGAATGCAG : AAAATGGTGCTGGAACTACAAACAAGCAAGGAAAGAAACTAGTCATTACTGATGAATATTTCCAGAGAGTCACCCGTGCTCTTATTCTGCGATTGAGGCAGCATGAAGAGACTGTAATGCAAGACG : GGACTGGATTAGCTGGAATGAGGCAGAAAGATCTTATACAGTGGTACGTGAGTCAGCAGAATGATAAGAATAGCTACAGCTCCATGGAAGAGGCAGCAGCCGAAGTCACGAAAGTGAAAGCTATTATAGAG : AGCTTGATTCGAAGAGAAGGCCATTTGATAGTTGTAGATGATGGTACGCAAGCAGGCGAGGAAAGTGGAAGGCAATCAGCATCCAGAAACGACCGGATTTTAGCAGTGGCTCCCAATTATGTTGTAGATTGATTTGGAATTCTTGTGAACAGGACAGAAAATCTGGGGCTGTTTGAGCGCAATGGCAGCGCGGCCTAAAGTTGTAGGACTGGGGAACTGTGTTTTTCTACTGTCATAGCTGAGAAATCTTACACCCTTTGTGGGAATGTTCTACTATACGAGACTAACTTGTTTTAAGTTAAACTAATTGTTGTACTTGAGTTTGAGAATGTGAAGTTATCAAGCCTACCTGTACTAGTATTAGTTTTGAGTTTGCTTATGTTCAATGTAGTATCAACTGGTATTAGTCTTCTGGATTCATTAATGGTACATTTTTAATTAGA</gDNA_template>
            <first_frame> F  Q  N  E  N  P  E  D  G  V  G  D  T  Q  N  G  T  G  Q  R  E  T  E  P  T  E  A  P  A  E  S  V  S  G  N  A   : E  N  G  A  G  T  T  N  K  Q  G  K  K  L  V  I  T  D  E  Y  F  Q  R  V  T  R  A  L  I  L  R  L  R  Q  H  E  E  T  V  M  Q  D   : G  T  G  L  A  G  M  R  Q  K  D  L  I  Q  W  Y  V  S  Q  Q  N  D  K  N  S  Y  S  S  M  E  E  A  A  A  E  V  T  K  V  K  A  I  I  E  :  S  L  I  R  R  E  G  H  L  I  V  V  D  D  G  T  Q  A  G  E  E  S  G  R  Q  S  A  S  R  N  D  R  I  L  A  V  A  P  N  Y  V  V  D  *  F  G  I  L  V  N  R  T  E  N  L  G  L  F  E  R  N  G  S  A  A  *  S  C  R  T  G  E  L  C  F  S  T  V  I  A  E  K  S  Y  T  L  C  G  N  V  L  L  Y  E  T  N  L  F  *  V  K  L  I  V  V  L  E  F  E  N  V  K  L  S  S  L  P  V  L  V  L  V  L  S  L  L  M  F  N  V  V  S  T  G  I  S  L  L  D  S  L  M  V  H  F  *  L   </first_frame>
            <second_frame>  S  K  M  R  I  P  R  M  V  L  V  I  L  K  M  V  L  V  K  G  K  L  N  Q  L  K  L  R  L  S  Q  Y  L  G  M  Q  :  K  M  V  L  E  L  Q  T  S  K  E  R  N  *  S  L  L  M  N  I  S  R  E  S  P  V  L  L  F  C  D  *  G  S  M  K  R  L  *  C  K  T  :  G  L  D  *  L  E  *  G  R  K  I  L  Y  S  G  T  *  V  S  R  M  I  R  I  A  T  A  P  W  K  R  Q  Q  P  K  S  R  K  *  K  L  L  *  R :   A  *  F  E  E  K  A  I  *  *  L  *  M  M  V  R  K  Q  A  R  K  V  E  G  N  Q  H  P  E  T  T  G  F  *  Q  W  L  P  I  M  L  *  I  D  L  E  F  L  *  T  G  Q  K  I  W  G  C  L  S  A  M  A  A  R  P  K  V  V  G  L  G  N  C  V  F  L  L  S  *  L  R  N  L  T  P  F  V  G  M  F  Y  Y  T  R  L  T  C  F  K  L  N  *  L  L  Y  L  S  L  R  M  *  S  Y  Q  A  Y  L  Y  *  Y  *  F  *  V  C  L  C  S  M  *  Y  Q  L  V  L  V  F  W  I  H  *  W  Y  I  F  N  *  </second_frame>
            <third_frame>   P  K  *  E  S  R  G  W  C  W  *  Y  S  K  W  Y  W  S  K  G  N  *  T  N  *  S  S  G  *  V  S  I  W  E  C  R :   K  W  C  W  N  Y  K  Q  A  R  K  E  T  S  H  Y  *  *  I  F  P  E  S  H  P  C  S  Y  S  A  I  E  A  A  *  R  D  C  N  A  R  R :   D  W  I  S  W  N  E  A  E  R  S  Y  T  V  V  R  E  S  A  E  *  *  E  *  L  Q  L  H  G  R  G  S  S  R  S  H  E  S  E  S  Y  Y  R   : E  L  D  S  K  R  R  P  F  D  S  C  R  *  W  Y  A  S  R  R  G  K  W  K  A  I  S  I  Q  K  R  P  D  F  S  S  G  S  Q  L  C  C  R  L  I  W  N  S  C  E  Q  D  R  K  S  G  A  V  *  A  Q  W  Q  R  G  L  K  L  *  D  W  G  T  V  F  F  Y  C  H  S  *  E  I  L  H  P  L  W  E  C  S  T  I  R  D  *  L  V  L  S  *  T  N  C  C  T  *  V  *  E  C  E  V  I  K  P  T  C  T  S  I  S  F  E  F  A  Y  V  Q  C  S  I  N  W  Y  *  S  S  G  F  I  N  G  T  F  L  I  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91893" stop="92001"/>
                    <exon start="92090" stop="92215"/>
                    <exon start="92499" stop="92629"/>
                    <exon start="92720" stop="92851"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>495</number_coding_nucleotides>
                  <number_encoded_amino_acids>165</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FQNENPEDGVGDTQNGTGQRETEPTEAPAESVSGNAENGAGTTNKQGKKLVITDEYFQRVTRALILRLRQHEETVMQDGTGLAGMRQKDLIQWYVSQQNDKNSYSSMEEAAAEVTKVKAIIESLIRREGHLIVVDDGTQAGEESGRQSASRNDRILAVAPNYVVD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="92089" e_stop="92215"/>
            <exon e_start="92499" e_stop="92629"/>
            <exon e_start="92720" e_stop="93162"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.312" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.984" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="92089" e_stop="92215" e_length="127"/>
          </exon>
          <intron i_serial="1" don_prob="0.312" acc_prob="0.974">
            <gDNA_intron_boundary i_start="92216" i_stop="92498" i_length="283"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92499" e_stop="92629" e_length="131"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.984">
            <gDNA_intron_boundary i_start="92630" i_stop="92719" i_length="90"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="92720" e_stop="93162" e_length="443"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92089" stop="92215"/>
              <exon start="92499" stop="92629"/>
              <exon start="92720" stop="93158"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715345" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92089" stop="92215"/>
              <exon start="92499" stop="92629"/>
              <exon start="92720" stop="93155"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717103" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92159" stop="92215"/>
              <exon start="92499" stop="92629"/>
              <exon start="92720" stop="93047"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353902" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92160" stop="92215"/>
              <exon start="92499" stop="92629"/>
              <exon start="92720" stop="93162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204232" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92815" stop="93160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216328" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAAATGGTGCTGGAACTACAAACAAGCAAGGAAAGAAACTAGTCATTACTGATGAATATTTCCAGAGAGTCACCCGTGCTCTTATTCTGCGATTGAGGCAGCATGAAGAGACTGTAATGCAAGACG : GGACTGGATTAGCTGGAATGAGGCAGAAAGATCTTATACAGTGGTACGTGAGTCAGCAGAATGATAAGAATAGCTACAGCTCCATGGAAGAGGCAGCAGCCGAAGTCACGAAAGTGAAAGCTATTATAGAG : AGCTTGATTCGAAGAGAAGGCCATTTGATAGTTGTAGATGATGGTACGCAAGCAGGCGAGGAAAGTGGAAGGCAATCAGCATCCAGAAACGACCGGATTTTAGCAGTGGCTCCCAATTATGTTGTAGATTGATTTGGAATTCTTGTGAACAGGACAGAAAATCTGGGGCTGTTTGAGCGCAATGGCAGCGCGGCCTAAAGTTGTAGGACTGGGGAACTGTGTTTTTCTACTGTCATAGCTGAGAAATCTTACACCCTTTGTGGGAATGTTCTACTATACGAGACTAACTTGTTTTAAGTTAAACTAATTGTTGTACTTGAGTTTGAGAATGTGAAGTTATCAAGCCTACCTGTACTAGTATTAGTTTTGAGTTTGCTTATGTTCAATGTAGTATCAACTGGTATTAGTCTTCTGGATTCATTAATGGTACATTTTTAATTAGA</gDNA_template>
            <first_frame> E  N  G  A  G  T  T  N  K  Q  G  K  K  L  V  I  T  D  E  Y  F  Q  R  V  T  R  A  L  I  L  R  L  R  Q  H  E  E  T  V  M  Q  D   : G  T  G  L  A  G  M  R  Q  K  D  L  I  Q  W  Y  V  S  Q  Q  N  D  K  N  S  Y  S  S  M  E  E  A  A  A  E  V  T  K  V  K  A  I  I  E  :  S  L  I  R  R  E  G  H  L  I  V  V  D  D  G  T  Q  A  G  E  E  S  G  R  Q  S  A  S  R  N  D  R  I  L  A  V  A  P  N  Y  V  V  D  *  F  G  I  L  V  N  R  T  E  N  L  G  L  F  E  R  N  G  S  A  A  *  S  C  R  T  G  E  L  C  F  S  T  V  I  A  E  K  S  Y  T  L  C  G  N  V  L  L  Y  E  T  N  L  F  *  V  K  L  I  V  V  L  E  F  E  N  V  K  L  S  S  L  P  V  L  V  L  V  L  S  L  L  M  F  N  V  V  S  T  G  I  S  L  L  D  S  L  M  V  H  F  *  L   </first_frame>
            <second_frame>  K  M  V  L  E  L  Q  T  S  K  E  R  N  *  S  L  L  M  N  I  S  R  E  S  P  V  L  L  F  C  D  *  G  S  M  K  R  L  *  C  K  T  :  G  L  D  *  L  E  *  G  R  K  I  L  Y  S  G  T  *  V  S  R  M  I  R  I  A  T  A  P  W  K  R  Q  Q  P  K  S  R  K  *  K  L  L  *  R :   A  *  F  E  E  K  A  I  *  *  L  *  M  M  V  R  K  Q  A  R  K  V  E  G  N  Q  H  P  E  T  T  G  F  *  Q  W  L  P  I  M  L  *  I  D  L  E  F  L  *  T  G  Q  K  I  W  G  C  L  S  A  M  A  A  R  P  K  V  V  G  L  G  N  C  V  F  L  L  S  *  L  R  N  L  T  P  F  V  G  M  F  Y  Y  T  R  L  T  C  F  K  L  N  *  L  L  Y  L  S  L  R  M  *  S  Y  Q  A  Y  L  Y  *  Y  *  F  *  V  C  L  C  S  M  *  Y  Q  L  V  L  V  F  W  I  H  *  W  Y  I  F  N  *  </second_frame>
            <third_frame>   K  W  C  W  N  Y  K  Q  A  R  K  E  T  S  H  Y  *  *  I  F  P  E  S  H  P  C  S  Y  S  A  I  E  A  A  *  R  D  C  N  A  R  R :   D  W  I  S  W  N  E  A  E  R  S  Y  T  V  V  R  E  S  A  E  *  *  E  *  L  Q  L  H  G  R  G  S  S  R  S  H  E  S  E  S  Y  Y  R   : E  L  D  S  K  R  R  P  F  D  S  C  R  *  W  Y  A  S  R  R  G  K  W  K  A  I  S  I  Q  K  R  P  D  F  S  S  G  S  Q  L  C  C  R  L  I  W  N  S  C  E  Q  D  R  K  S  G  A  V  *  A  Q  W  Q  R  G  L  K  L  *  D  W  G  T  V  F  F  Y  C  H  S  *  E  I  L  H  P  L  W  E  C  S  T  I  R  D  *  L  V  L  S  *  T  N  C  C  T  *  V  *  E  C  E  V  I  K  P  T  C  T  S  I  S  F  E  F  A  Y  V  Q  C  S  I  N  W  Y  *  S  S  G  F  I  N  G  T  F  L  I  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92089" stop="92215"/>
                    <exon start="92499" stop="92629"/>
                    <exon start="92720" stop="92851"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>387</number_coding_nucleotides>
                  <number_encoded_amino_acids>129</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ENGAGTTNKQGKKLVITDEYFQRVTRALILRLRQHEETVMQDGTGLAGMRQKDLIQWYVSQQNDKNSYSSMEEAAAEVTKVKAIIESLIRREGHLIVVDDGTQAGEESGRQSASRNDRILAVAPNYVVD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="+" PGL_start="94116" PGL_stop="100041"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="94116" e_stop="94296"/>
            <exon e_start="94384" e_stop="94521"/>
            <exon e_start="95317" e_stop="95396"/>
            <exon e_start="95815" e_stop="95901"/>
            <exon e_start="96022" e_stop="96072"/>
            <exon e_start="96143" e_stop="96260"/>
            <exon e_start="96342" e_stop="96398"/>
            <exon e_start="96524" e_stop="96588"/>
            <exon e_start="96675" e_stop="96758"/>
            <exon e_start="96932" e_stop="96982"/>
            <exon e_start="97096" e_stop="97158"/>
            <exon e_start="97249" e_stop="97295"/>
            <exon e_start="97442" e_stop="97511"/>
            <exon e_start="97583" e_stop="97645"/>
            <exon e_start="97923" e_stop="98012"/>
            <exon e_start="98084" e_stop="98122"/>
            <exon e_start="98233" e_stop="98460"/>
            <exon e_start="98568" e_stop="98653"/>
            <exon e_start="98766" e_stop="98814"/>
            <exon e_start="98960" e_stop="99040"/>
            <exon e_start="99122" e_stop="99215"/>
            <exon e_start="99536" e_stop="100041"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.984" acc_prob="0.939" e_score="1.000"/>
          <exon-intron don_prob="0.947" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.882" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="0.765" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.909" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.317" acc_prob="0.905" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.934" e_score="1.000"/>
          <exon-intron don_prob="0.965" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.957" e_score="1.000"/>
          <exon-intron don_prob="0.043" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.941" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.953" acc_prob="0.921" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.759" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="94116" e_stop="94296" e_length="181"/>
          </exon>
          <intron i_serial="1" don_prob="0.984" acc_prob="0.939">
            <gDNA_intron_boundary i_start="94297" i_stop="94383" i_length="87"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="94384" e_stop="94521" e_length="138"/>
          </exon>
          <intron i_serial="2" don_prob="0.947" acc_prob="0.998">
            <gDNA_intron_boundary i_start="94522" i_stop="95316" i_length="795"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="95317" e_stop="95396" e_length="80"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="95397" i_stop="95814" i_length="418"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="95815" e_stop="95901" e_length="87"/>
          </exon>
          <intron i_serial="4" don_prob="0.995" acc_prob="0.982">
            <gDNA_intron_boundary i_start="95902" i_stop="96021" i_length="120"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="96022" e_stop="96072" e_length="51"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="96073" i_stop="96142" i_length="70"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="96143" e_stop="96260" e_length="118"/>
          </exon>
          <intron i_serial="6" don_prob="0.882" acc_prob="0.958">
            <gDNA_intron_boundary i_start="96261" i_stop="96341" i_length="81"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="96342" e_stop="96398" e_length="57"/>
          </exon>
          <intron i_serial="7" don_prob="0.765" acc_prob="0.944">
            <gDNA_intron_boundary i_start="96399" i_stop="96523" i_length="125"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="96524" e_stop="96588" e_length="65"/>
          </exon>
          <intron i_serial="8" don_prob="0.909" acc_prob="0.978">
            <gDNA_intron_boundary i_start="96589" i_stop="96674" i_length="86"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="96675" e_stop="96758" e_length="84"/>
          </exon>
          <intron i_serial="9" don_prob="0.993" acc_prob="0.986">
            <gDNA_intron_boundary i_start="96759" i_stop="96931" i_length="173"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="96932" e_stop="96982" e_length="51"/>
          </exon>
          <intron i_serial="10" don_prob="0.995" acc_prob="0.998">
            <gDNA_intron_boundary i_start="96983" i_stop="97095" i_length="113"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="97096" e_stop="97158" e_length="63"/>
          </exon>
          <intron i_serial="11" don_prob="0.317" acc_prob="0.905">
            <gDNA_intron_boundary i_start="97159" i_stop="97248" i_length="90"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="97249" e_stop="97295" e_length="47"/>
          </exon>
          <intron i_serial="12" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="97296" i_stop="97441" i_length="146"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="97442" e_stop="97511" e_length="70"/>
          </exon>
          <intron i_serial="13" don_prob="0.960" acc_prob="0.934">
            <gDNA_intron_boundary i_start="97512" i_stop="97582" i_length="71"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="97583" e_stop="97645" e_length="63"/>
          </exon>
          <intron i_serial="14" don_prob="0.965" acc_prob="0.995">
            <gDNA_intron_boundary i_start="97646" i_stop="97922" i_length="277"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="97923" e_stop="98012" e_length="90"/>
          </exon>
          <intron i_serial="15" don_prob="1.000" acc_prob="0.957">
            <gDNA_intron_boundary i_start="98013" i_stop="98083" i_length="71"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="98084" e_stop="98122" e_length="39"/>
          </exon>
          <intron i_serial="16" don_prob="0.043" acc_prob="0.983">
            <gDNA_intron_boundary i_start="98123" i_stop="98232" i_length="110"/>
          </intron>
          <exon e_serial="17" e_score="1.000">
            <gDNA_exon_boundary e_start="98233" e_stop="98460" e_length="228"/>
          </exon>
          <intron i_serial="17" don_prob="0.941" acc_prob="0.994">
            <gDNA_intron_boundary i_start="98461" i_stop="98567" i_length="107"/>
          </intron>
          <exon e_serial="18" e_score="1.000">
            <gDNA_exon_boundary e_start="98568" e_stop="98653" e_length="86"/>
          </exon>
          <intron i_serial="18" don_prob="0.953" acc_prob="0.921">
            <gDNA_intron_boundary i_start="98654" i_stop="98765" i_length="112"/>
          </intron>
          <exon e_serial="19" e_score="1.000">
            <gDNA_exon_boundary e_start="98766" e_stop="98814" e_length="49"/>
          </exon>
          <intron i_serial="19" don_prob="0.980" acc_prob="0.999">
            <gDNA_intron_boundary i_start="98815" i_stop="98959" i_length="145"/>
          </intron>
          <exon e_serial="20" e_score="1.000">
            <gDNA_exon_boundary e_start="98960" e_stop="99040" e_length="81"/>
          </exon>
          <intron i_serial="20" don_prob="0.999" acc_prob="0.992">
            <gDNA_intron_boundary i_start="99041" i_stop="99121" i_length="81"/>
          </intron>
          <exon e_serial="21" e_score="1.000">
            <gDNA_exon_boundary e_start="99122" e_stop="99215" e_length="94"/>
          </exon>
          <intron i_serial="21" don_prob="0.759" acc_prob="0.999">
            <gDNA_intron_boundary i_start="99216" i_stop="99535" i_length="320"/>
          </intron>
          <exon e_serial="22" e_score="0.992">
            <gDNA_exon_boundary e_start="99536" e_stop="100041" e_length="506"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94116" stop="94296"/>
              <exon start="94384" stop="94521"/>
              <exon start="95317" stop="95396"/>
              <exon start="95815" stop="95901"/>
              <exon start="96022" stop="96072"/>
              <exon start="96143" stop="96165"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307036" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94128" stop="94296"/>
              <exon start="94384" stop="94521"/>
              <exon start="95317" stop="95396"/>
              <exon start="95815" stop="95901"/>
              <exon start="96022" stop="96072"/>
              <exon start="96143" stop="96189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205964" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94128" stop="94296"/>
              <exon start="94384" stop="94521"/>
              <exon start="95317" stop="95396"/>
              <exon start="95815" stop="95856"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209607" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94147" stop="94296"/>
              <exon start="94384" stop="94521"/>
              <exon start="95317" stop="95396"/>
              <exon start="95815" stop="95901"/>
              <exon start="96022" stop="96072"/>
              <exon start="96143" stop="96260"/>
              <exon start="96342" stop="96398"/>
              <exon start="96524" stop="96588"/>
              <exon start="96675" stop="96758"/>
              <exon start="96932" stop="96982"/>
              <exon start="97096" stop="97158"/>
              <exon start="97249" stop="97295"/>
              <exon start="97442" stop="97511"/>
              <exon start="97583" stop="97645"/>
              <exon start="97923" stop="98012"/>
              <exon start="98084" stop="98122"/>
              <exon start="98233" stop="98460"/>
              <exon start="98568" stop="98653"/>
              <exon start="98766" stop="98814"/>
              <exon start="98960" stop="99040"/>
              <exon start="99122" stop="99215"/>
              <exon start="99536" stop="99656"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745093" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94176" stop="94296"/>
              <exon start="94384" stop="94521"/>
              <exon start="95317" stop="95396"/>
              <exon start="95815" stop="95901"/>
              <exon start="96022" stop="96072"/>
              <exon start="96143" stop="96260"/>
              <exon start="96342" stop="96371"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94176" stop="94296"/>
              <exon start="94384" stop="94521"/>
              <exon start="95317" stop="95396"/>
              <exon start="95815" stop="95901"/>
              <exon start="96022" stop="96072"/>
              <exon start="96143" stop="96246"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324612" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94216" stop="94296"/>
              <exon start="94384" stop="94521"/>
              <exon start="95317" stop="95396"/>
              <exon start="95815" stop="95901"/>
              <exon start="96022" stop="96072"/>
              <exon start="96143" stop="96241"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249404" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97584" stop="97645"/>
              <exon start="97923" stop="98012"/>
              <exon start="98084" stop="98122"/>
              <exon start="98233" stop="98460"/>
              <exon start="98568" stop="98653"/>
              <exon start="98766" stop="98772"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319359" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98970" stop="99040"/>
              <exon start="99122" stop="99215"/>
              <exon start="99536" stop="99949"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E691312" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98970" stop="99040"/>
              <exon start="99122" stop="99215"/>
              <exon start="99536" stop="99949"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E691311" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98970" stop="99040"/>
              <exon start="99122" stop="99215"/>
              <exon start="99536" stop="99941"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E695151" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99148" stop="99215"/>
              <exon start="99536" stop="99982"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359082" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99536" stop="100010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226124" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99610" stop="100010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226028" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99632" stop="100041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E221062" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99671" stop="100039"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E221214" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATACATATAGCCATAAAGCCGCCATCGCTTCATATTTCATACCTAACAAAGTTTCCGCCATCATTCTCTCCTACCATTCTTCCTTCTCCTTTGCCATTCTCTTTTCCTTCATATCTCAGCAAAGTTTACACACAGCTTGCTGTTCGGTGCGGCGGGTAATTTCAAATCCATCTTTAGTAG : ATTGACGAGGAGAATCAGAGATGAAGTATGTGTTGGTTACAGGAGGAGTGGTTAGCGGGCTCGGTAAAGGAGTTACCGCCAGTAGTATCGGTCTTATCCTTAAGTGCTGTGGTCTTCGCGTTACTTCCATTAAGATAG : ATCCTTACTTGAACACTGATGCTGGAACAATGTCTCCATTTGAGCATGGAGAAGTATTTGTCTTGGACGATGGTGGAGAG : GTGGACCTAGACCTTGGTAACTATGAACGCTTTCTGGATATTAAGTTGACACGTGACAACAATATAACTACTGGAAAAATTTACCAG : TCTGTTCTTGATAAGGAGAGAAAAGGAGATTATTTGGGGAAGACTGTTCAG : GTCGTCCCTCACATTACAGATGCCATTCAAGAGTGGATTGAACGTGTGGCTGTCATACCAGTTGATGGAGAGGATAGTCCAGCTGATGTTTGTGTTATAGAACTGGGTGGAACTATAG : GAGATATTGAGTCTATGCCATTTATTGAAGCTTTAGGACAATTCTCATATCGTGTAG : GTGCTGGAAATTTTTGCTTGATACATGTCAGCCTTGTGCCCGTTTTGAATGTAGTTGGTGAGCAG : AAAACAAAGCCAACTCAACACAGCGTCAGGGGTTTGAGAAGCCTGGGACTGACTCCAAATATTTTAGCCTGCCGGAGCACAACG : GCACTTGATGATAACGTGAAGGAGAAACTTTCCCGTTTTTGCCATGTTCCG : GTTGATAGCATCATCAGTCTTTATGATGCTTCAAACATTTGGCGAGTTCCTTTGATTTTAAGA : GACCAGAAGGCCCATGAAGCAATTCTGAAAGTGCTGAATCTTAAAGG : AGTTGCTCGGGAACCTGTCTTTGGAGAATGGACATCTCGGACTGAACTTTGTGACAGACTACATGAGCCA : GTTAGAGTTGCCATGGTGGGAAAGTACACTGGACTTTCAGATTCGTATCTCTCAGTACTGAAG : GCTCTTTTGCATTCCTCTGTAGCTTGCCGCAGGAAACTCTTTGTCGATTGGGTTCCAGCCAGTGACCTTGAAAATGAAACTGCCAAAGAG : AATCCTGAAAATTATAGAAATTCGTGGAATTTGCTGAAG : GGGGCGGATGCTGTACTAGTTCCCGGAGGATTTGGTGATAGAGGTGTGGAGGGTAAAATACTTGCTGCCAAATACGCACGTGAAAACAGGATTCCTTACCTGGGCATATGTTTAGGCATGCAAATTGCTGTTATTGAGTATGCTAGATCTATTCTTGGGTTGCAAGATGCGAACAGTACAGAGTTTGATCCCAACACTCCGAATCCTTGTGTAATTTTCATGCCGGAG : GGTTCAAAAACGCATATGGGGGGTACAATGCGTCTTGGATCAAGAAGAACTTATTTTCAAGTCAGAGATTCTAAATCTACAAAATT : ATTTGGCAACCAGAGCTTTGTAGATGAGAGGCACCGTCATAGATATGAG : GTGAATCCTGATATGGTGCAGCAATTTGAAGATGCTGGCCTTTCTTTCACTGGCAAAGATGAAACTGGTCGTCGCATGGAG : ATTGTTGAGCTGCCTAATCATCCGTACTTTATTGGCGTTCAATTTCATCCTGAATTTAAATCAAGGCCAGGAAAACCGTCTGCCGTGTTCTTAG : GGCTTATAGCAGCAGCATGCGGGCAGCTTGATTGTCTCCTGAAGAAGGGTGGAACACCGACTCATGGACTTAGCAATGGTACAGCATCTGGCGAAAAATTGCATCGAAATGGAAATGGAACGACTCTTGCCAATGGATCTTTAGATGGGATTTATCGCAATGGGAATGGTGTACATGTCTAAGGAAACAGTAAAAACACTATTGGGGTCAATGGCCTTGTGATCGATCAAATTTTGCTAGTGCCTTTCTTCCAGTCGATATGTATAGGTTTTACAGCTTCTCTCGTTAAGGCTATCTAGTTATAGAGCTAAATTCCGGTCTTTGTTACGGAGTTGTAGCGGCAGCAAGTTTAATTTAGGCATTTACTTTGAACGATTAAAAAACTCTTTTGATTACCTGCTCCAACATGAAACTTGTGTTTGGTAGTAAAAGATTGGATTGCTCCTAATTCGATCTTTATGAAGTTCTTGAGATGGCATCTCTATCCACTTTAAGTTTTTGTTGAT</gDNA_template>
            <first_frame> N  T  Y  S  H  K  A  A  I  A  S  Y  F  I  P  N  K  V  S  A  I  I  L  S  Y  H  S  S  F  S  F  A  I  L  F  S  F  I  S  Q  Q  S  L  H  T  A  C  C  S  V  R  R  V  I  S  N  P  S  L  V   : D  *  R  G  E  S  E  M  K  Y  V  L  V  T  G  G  V  V  S  G  L  G  K  G  V  T  A  S  S  I  G  L  I  L  K  C  C  G  L  R  V  T  S  I  K  I   : D  P  Y  L  N  T  D  A  G  T  M  S  P  F  E  H  G  E  V  F  V  L  D  D  G  G  E  :  V  D  L  D  L  G  N  Y  E  R  F  L  D  I  K  L  T  R  D  N  N  I  T  T  G  K  I  Y  Q  :  S  V  L  D  K  E  R  K  G  D  Y  L  G  K  T  V  Q  :  V  V  P  H  I  T  D  A  I  Q  E  W  I  E  R  V  A  V  I  P  V  D  G  E  D  S  P  A  D  V  C  V  I  E  L  G  G  T  I   : G  D  I  E  S  M  P  F  I  E  A  L  G  Q  F  S  Y  R  V   : G  A  G  N  F  C  L  I  H  V  S  L  V  P  V  L  N  V  V  G  E  Q  :  K  T  K  P  T  Q  H  S  V  R  G  L  R  S  L  G  L  T  P  N  I  L  A  C  R  S  T  T  :  A  L  D  D  N  V  K  E  K  L  S  R  F  C  H  V  P  :  V  D  S  I  I  S  L  Y  D  A  S  N  I  W  R  V  P  L  I  L  R  :  D  Q  K  A  H  E  A  I  L  K  V  L  N  L  K  G :   V  A  R  E  P  V  F  G  E  W  T  S  R  T  E  L  C  D  R  L  H  E  P  :  V  R  V  A  M  V  G  K  Y  T  G  L  S  D  S  Y  L  S  V  L  K  :  A  L  L  H  S  S  V  A  C  R  R  K  L  F  V  D  W  V  P  A  S  D  L  E  N  E  T  A  K  E  :  N  P  E  N  Y  R  N  S  W  N  L  L  K  :  G  A  D  A  V  L  V  P  G  G  F  G  D  R  G  V  E  G  K  I  L  A  A  K  Y  A  R  E  N  R  I  P  Y  L  G  I  C  L  G  M  Q  I  A  V  I  E  Y  A  R  S  I  L  G  L  Q  D  A  N  S  T  E  F  D  P  N  T  P  N  P  C  V  I  F  M  P  E  :  G  S  K  T  H  M  G  G  T  M  R  L  G  S  R  R  T  Y  F  Q  V  R  D  S  K  S  T  K  L :   F  G  N  Q  S  F  V  D  E  R  H  R  H  R  Y  E  :  V  N  P  D  M  V  Q  Q  F  E  D  A  G  L  S  F  T  G  K  D  E  T  G  R  R  M  E  :  I  V  E  L  P  N  H  P  Y  F  I  G  V  Q  F  H  P  E  F  K  S  R  P  G  K  P  S  A  V  F  L   : G  L  I  A  A  A  C  G  Q  L  D  C  L  L  K  K  G  G  T  P  T  H  G  L  S  N  G  T  A  S  G  E  K  L  H  R  N  G  N  G  T  T  L  A  N  G  S  L  D  G  I  Y  R  N  G  N  G  V  H  V  *  G  N  S  K  N  T  I  G  V  N  G  L  V  I  D  Q  I  L  L  V  P  F  F  Q  S  I  C  I  G  F  T  A  S  L  V  K  A  I  *  L  *  S  *  I  P  V  F  V  T  E  L  *  R  Q  Q  V  *  F  R  H  L  L  *  T  I  K  K  L  F  *  L  P  A  P  T  *  N  L  C  L  V  V  K  D  W  I  A  P  N  S  I  F  M  K  F  L  R  W  H  L  Y  P  L  *  V  F  V  D </first_frame>
            <second_frame>  I  H  I  A  I  K  P  P  S  L  H  I  S  Y  L  T  K  F  P  P  S  F  S  P  T  I  L  P  S  P  L  P  F  S  F  P  S  Y  L  S  K  V  Y  T  Q  L  A  V  R  C  G  G  *  F  Q  I  H  L  *  *  :  I  D  E  E  N  Q  R  *  S  M  C  W  L  Q  E  E  W  L  A  G  S  V  K  E  L  P  P  V  V  S  V  L  S  L  S  A  V  V  F  A  L  L  P  L  R  *  :  I  L  T  *  T  L  M  L  E  Q  C  L  H  L  S  M  E  K  Y  L  S  W  T  M  V  E  R :   W  T  *  T  L  V  T  M  N  A  F  W  I  L  S  *  H  V  T  T  I  *  L  L  E  K  F  T  S :   L  F  L  I  R  R  E  K  E  I  I  W  G  R  L  F  R :   S  S  L  T  L  Q  M  P  F  K  S  G  L  N  V  W  L  S  Y  Q  L  M  E  R  I  V  Q  L  M  F  V  L  *  N  W  V  E  L  *  :  E  I  L  S  L  C  H  L  L  K  L  *  D  N  S  H  I  V  *  :  V  L  E  I  F  A  *  Y  M  S  A  L  C  P  F  *  M  *  L  V  S  R :   K  Q  S  Q  L  N  T  A  S  G  V  *  E  A  W  D  *  L  Q  I  F  *  P  A  G  A  Q  R :   H  L  M  I  T  *  R  R  N  F  P  V  F  A  M  F  R :   L  I  A  S  S  V  F  M  M  L  Q  T  F  G  E  F  L  *  F  *  E :   T  R  R  P  M  K  Q  F  *  K  C  *  I  L  K   : E  L  L  G  N  L  S  L  E  N  G  H  L  G  L  N  F  V  T  D  Y  M  S  Q :   L  E  L  P  W  W  E  S  T  L  D  F  Q  I  R  I  S  Q  Y  *  R :   L  F  C  I  P  L  *  L  A  A  G  N  S  L  S  I  G  F  Q  P  V  T  L  K  M  K  L  P  K  R :   I  L  K  I  I  E  I  R  G  I  C  *  R :   G  R  M  L  Y  *  F  P  E  D  L  V  I  E  V  W  R  V  K  Y  L  L  P  N  T  H  V  K  T  G  F  L  T  W  A  Y  V  *  A  C  K  L  L  L  L  S  M  L  D  L  F  L  G  C  K  M  R  T  V  Q  S  L  I  P  T  L  R  I  L  V  *  F  S  C  R  R :   V  Q  K  R  I  W  G  V  Q  C  V  L  D  Q  E  E  L  I  F  K  S  E  I  L  N  L  Q  N   : Y  L  A  T  R  A  L  *  M  R  G  T  V  I  D  M  R :   *  I  L  I  W  C  S  N  L  K  M  L  A  F  L  S  L  A  K  M  K  L  V  V  A  W  R :   L  L  S  C  L  I  I  R  T  L  L  A  F  N  F  I  L  N  L  N  Q  G  Q  E  N  R  L  P  C  S  *  :  G  L  *  Q  Q  H  A  G  S  L  I  V  S  *  R  R  V  E  H  R  L  M  D  L  A  M  V  Q  H  L  A  K  N  C  I  E  M  E  M  E  R  L  L  P  M  D  L  *  M  G  F  I  A  M  G  M  V  Y  M  S  K  E  T  V  K  T  L  L  G  S  M  A  L  *  S  I  K  F  C  *  C  L  S  S  S  R  Y  V  *  V  L  Q  L  L  S  L  R  L  S  S  Y  R  A  K  F  R  S  L  L  R  S  C  S  G  S  K  F  N  L  G  I  Y  F  E  R  L  K  N  S  F  D  Y  L  L  Q  H  E  T  C  V  W  *  *  K  I  G  L  L  L  I  R  S  L  *  S  S  *  D  G  I  S  I  H  F  K  F  L  L   </second_frame>
            <third_frame>   Y  I  *  P  *  S  R  H  R  F  I  F  H  T  *  Q  S  F  R  H  H  S  L  L  P  F  F  L  L  L  C  H  S  L  F  L  H  I  S  A  K  F  T  H  S  L  L  F  G  A  A  G  N  F  K  S  I  F  S  R :   L  T  R  R  I  R  D  E  V  C  V  G  Y  R  R  S  G  *  R  A  R  *  R  S  Y  R  Q  *  Y  R  S  Y  P  *  V  L  W  S  S  R  Y  F  H  *  D  R :   S  L  L  E  H  *  C  W  N  N  V  S  I  *  A  W  R  S  I  C  L  G  R  W  W  R   : G  G  P  R  P  W  *  L  *  T  L  S  G  Y  *  V  D  T  *  Q  Q  Y  N  Y  W  K  N  L  P   : V  C  S  *  *  G  E  K  R  R  L  F  G  E  D  C  S   : G  R  P  S  H  Y  R  C  H  S  R  V  D  *  T  C  G  C  H  T  S  *  W  R  G  *  S  S  *  C  L  C  Y  R  T  G  W  N  Y  R :   R  Y  *  V  Y  A  I  Y  *  S  F  R  T  I  L  I  S  C  R :   C  W  K  F  L  L  D  T  C  Q  P  C  A  R  F  E  C  S  W  *  A   : E  N  K  A  N  S  T  Q  R  Q  G  F  E  K  P  G  T  D  S  K  Y  F  S  L  P  E  H  N   : G  T  *  *  *  R  E  G  E  T  F  P  F  L  P  C  S   : G  *  *  H  H  Q  S  L  *  C  F  K  H  L  A  S  S  F  D  F  K   : R  P  E  G  P  *  S  N  S  E  S  A  E  S  *  R  :  S  C  S  G  T  C  L  W  R  M  D  I  S  D  *  T  L  *  Q  T  T  *  A   : S  *  S  C  H  G  G  K  V  H  W  T  F  R  F  V  S  L  S  T  E   : G  S  F  A  F  L  C  S  L  P  Q  E  T  L  C  R  L  G  S  S  Q  *  P  *  K  *  N  C  Q  R   : E  S  *  K  L  *  K  F  V  E  F  A  E   : G  G  G  C  C  T  S  S  R  R  I  W  *  *  R  C  G  G  *  N  T  C  C  Q  I  R  T  *  K  Q  D  S  L  P  G  H  M  F  R  H  A  N  C  C  Y  *  V  C  *  I  Y  S  W  V  A  R  C  E  Q  Y  R  V  *  S  Q  H  S  E  S  L  C  N  F  H  A  G   : G  F  K  N  A  Y  G  G  Y  N  A  S  W  I  K  K  N  L  F  S  S  Q  R  F  *  I  Y  K  I  :  I  W  Q  P  E  L  C  R  *  E  A  P  S  *  I  *   : G  E  S  *  Y  G  A  A  I  *  R  C  W  P  F  F  H  W  Q  R  *  N  W  S  S  H  G   : D  C  *  A  A  *  S  S  V  L  Y  W  R  S  I  S  S  *  I  *  I  K  A  R  K  T  V  C  R  V  L  R :   A  Y  S  S  S  M  R  A  A  *  L  S  P  E  E  G  W  N  T  D  S  W  T  *  Q  W  Y  S  I  W  R  K  I  A  S  K  W  K  W  N  D  S  C  Q  W  I  F  R  W  D  L  S  Q  W  E  W  C  T  C  L  R  K  Q  *  K  H  Y  W  G  Q  W  P  C  D  R  S  N  F  A  S  A  F  L  P  V  D  M  Y  R  F  Y  S  F  S  R  *  G  Y  L  V  I  E  L  N  S  G  L  C  Y  G  V  V  A  A  A  S  L  I  *  A  F  T  L  N  D  *  K  T  L  L  I  T  C  S  N  M  K  L  V  F  G  S  K  R  L  D  C  S  *  F  D  L  Y  E  V  L  E  M  A  S  L  S  T  L  S  F  C  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94389" stop="94521"/>
                    <exon start="95317" stop="95396"/>
                    <exon start="95815" stop="95901"/>
                    <exon start="96022" stop="96072"/>
                    <exon start="96143" stop="96260"/>
                    <exon start="96342" stop="96398"/>
                    <exon start="96524" stop="96588"/>
                    <exon start="96675" stop="96758"/>
                    <exon start="96932" stop="96982"/>
                    <exon start="97096" stop="97158"/>
                    <exon start="97249" stop="97295"/>
                    <exon start="97442" stop="97511"/>
                    <exon start="97583" stop="97645"/>
                    <exon start="97923" stop="98012"/>
                    <exon start="98084" stop="98122"/>
                    <exon start="98233" stop="98460"/>
                    <exon start="98568" stop="98653"/>
                    <exon start="98766" stop="98814"/>
                    <exon start="98960" stop="99040"/>
                    <exon start="99122" stop="99215"/>
                    <exon start="99536" stop="99717"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1815</number_coding_nucleotides>
                  <number_encoded_amino_acids>605</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RGESEMKYVLVTGGVVSGLGKGVTASSIGLILKCCGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQSVLDKERKGDYLGKTVQVVPHITDAIQEWIERVAVIPVDGEDSPADVCVIELGGTIGDIESMPFIEALGQFSYRVGAGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRSLGLTPNILACRSTTALDDNVKEKLSRFCHVPVDSIISLYDASNIWRVPLILRDQKAHEAILKVLNLKGVAREPVFGEWTSRTELCDRLHEPVRVAMVGKYTGLSDSYLSVLKALLHSSVACRRKLFVDWVPASDLENETAKENPENYRNSWNLLKGADAVLVPGGFGDRGVEGKILAAKYARENRIPYLGICLGMQIAVIEYARSILGLQDANSTEFDPNTPNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVRDSKSTKLFGNQSFVDERHRHRYEVNPDMVQQFEDAGLSFTGKDETGRRMEIVELPNHPYFIGVQFHPEFKSRPGKPSAVFLGLIAAACGQLDCLLKKGGTPTHGLSNGTASGEKLHRNGNGTTLANGSLDGIYRNGNGVHV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="98230" e_stop="98460"/>
            <exon e_start="98568" e_stop="98653"/>
            <exon e_start="98766" e_stop="98814"/>
            <exon e_start="98960" e_stop="99040"/>
            <exon e_start="99122" e_stop="99215"/>
            <exon e_start="99536" e_stop="100041"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.941" acc_prob="0.994" e_score="0.978"/>
          <exon-intron don_prob="0.953" acc_prob="0.921" e_score="0.988"/>
          <exon-intron don_prob="0.980" acc_prob="0.999" e_score="0.918"/>
          <exon-intron don_prob="0.999" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.759" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.978">
            <gDNA_exon_boundary e_start="98230" e_stop="98460" e_length="231"/>
          </exon>
          <intron i_serial="1" don_prob="0.941" acc_prob="0.994">
            <gDNA_intron_boundary i_start="98461" i_stop="98567" i_length="107"/>
          </intron>
          <exon e_serial="2" e_score="0.988">
            <gDNA_exon_boundary e_start="98568" e_stop="98653" e_length="86"/>
          </exon>
          <intron i_serial="2" don_prob="0.953" acc_prob="0.921">
            <gDNA_intron_boundary i_start="98654" i_stop="98765" i_length="112"/>
          </intron>
          <exon e_serial="3" e_score="0.918">
            <gDNA_exon_boundary e_start="98766" e_stop="98814" e_length="49"/>
          </exon>
          <intron i_serial="3" don_prob="0.980" acc_prob="0.999">
            <gDNA_intron_boundary i_start="98815" i_stop="98959" i_length="145"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="98960" e_stop="99040" e_length="81"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.992">
            <gDNA_intron_boundary i_start="99041" i_stop="99121" i_length="81"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="99122" e_stop="99215" e_length="94"/>
          </exon>
          <intron i_serial="5" don_prob="0.759" acc_prob="0.999">
            <gDNA_intron_boundary i_start="99216" i_stop="99535" i_length="320"/>
          </intron>
          <exon e_serial="6" e_score="0.992">
            <gDNA_exon_boundary e_start="99536" e_stop="100041" e_length="506"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98230" stop="98460"/>
              <exon start="98568" stop="98653"/>
              <exon start="98766" stop="98814"/>
              <exon start="98960" stop="99040"/>
              <exon start="99122" stop="99182"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319918" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98970" stop="99040"/>
              <exon start="99122" stop="99215"/>
              <exon start="99536" stop="99949"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E691312" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98970" stop="99040"/>
              <exon start="99122" stop="99215"/>
              <exon start="99536" stop="99949"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E691311" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98970" stop="99040"/>
              <exon start="99122" stop="99215"/>
              <exon start="99536" stop="99941"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E695151" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99148" stop="99215"/>
              <exon start="99536" stop="99982"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359082" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99536" stop="100010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226124" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99610" stop="100010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226028" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99632" stop="100041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E221062" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99671" stop="100039"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E221214" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGGGGGCGGATGCTGTACTAGTTCCCGGAGGATTTGGTGATAGAGGTGTGGAGGGTAAAATACTTGCTGCCAAATACGCACGTGAAAACAGGATTCCTTACCTGGGCATATGTTTAGGCATGCAAATTGCTGTTATTGAGTATGCTAGATCTATTCTTGGGTTGCAAGATGCGAACAGTACAGAGTTTGATCCCAACACTCCGAATCCTTGTGTAATTTTCATGCCGGAG : GGTTCAAAAACGCATATGGGGGGTACAATGCGTCTTGGATCAAGAAGAACTTATTTTCAAGTCAGAGATTCTAAATCTACAAAATT : ATTTGGCAACCAGAGCTTTGTAGATGAGAGGCACCGTCATAGATATGAG : GTGAATCCTGATATGGTGCAGCAATTTGAAGATGCTGGCCTTTCTTTCACTGGCAAAGATGAAACTGGTCGTCGCATGGAG : ATTGTTGAGCTGCCTAATCATCCGTACTTTATTGGCGTTCAATTTCATCCTGAATTTAAATCAAGGCCAGGAAAACCGTCTGCCGTGTTCTTAG : GGCTTATAGCAGCAGCATGCGGGCAGCTTGATTGTCTCCTGAAGAAGGGTGGAACACCGACTCATGGACTTAGCAATGGTACAGCATCTGGCGAAAAATTGCATCGAAATGGAAATGGAACGACTCTTGCCAATGGATCTTTAGATGGGATTTATCGCAATGGGAATGGTGTACATGTCTAAGGAAACAGTAAAAACACTATTGGGGTCAATGGCCTTGTGATCGATCAAATTTTGCTAGTGCCTTTCTTCCAGTCGATATGTATAGGTTTTACAGCTTCTCTCGTTAAGGCTATCTAGTTATAGAGCTAAATTCCGGTCTTTGTTACGGAGTTGTAGCGGCAGCAAGTTTAATTTAGGCATTTACTTTGAACGATTAAAAAACTCTTTTGATTACCTGCTCCAACATGAAACTTGTGTTTGGTAGTAAAAGATTGGATTGCTCCTAATTCGATCTTTATGAAGTTCTTGAGATGGCATCTCTATCCACTTTAAGTTTTTGTTGAT</gDNA_template>
            <first_frame> *  G  A  D  A  V  L  V  P  G  G  F  G  D  R  G  V  E  G  K  I  L  A  A  K  Y  A  R  E  N  R  I  P  Y  L  G  I  C  L  G  M  Q  I  A  V  I  E  Y  A  R  S  I  L  G  L  Q  D  A  N  S  T  E  F  D  P  N  T  P  N  P  C  V  I  F  M  P  E  :  G  S  K  T  H  M  G  G  T  M  R  L  G  S  R  R  T  Y  F  Q  V  R  D  S  K  S  T  K  L :   F  G  N  Q  S  F  V  D  E  R  H  R  H  R  Y  E  :  V  N  P  D  M  V  Q  Q  F  E  D  A  G  L  S  F  T  G  K  D  E  T  G  R  R  M  E  :  I  V  E  L  P  N  H  P  Y  F  I  G  V  Q  F  H  P  E  F  K  S  R  P  G  K  P  S  A  V  F  L   : G  L  I  A  A  A  C  G  Q  L  D  C  L  L  K  K  G  G  T  P  T  H  G  L  S  N  G  T  A  S  G  E  K  L  H  R  N  G  N  G  T  T  L  A  N  G  S  L  D  G  I  Y  R  N  G  N  G  V  H  V  *  G  N  S  K  N  T  I  G  V  N  G  L  V  I  D  Q  I  L  L  V  P  F  F  Q  S  I  C  I  G  F  T  A  S  L  V  K  A  I  *  L  *  S  *  I  P  V  F  V  T  E  L  *  R  Q  Q  V  *  F  R  H  L  L  *  T  I  K  K  L  F  *  L  P  A  P  T  *  N  L  C  L  V  V  K  D  W  I  A  P  N  S  I  F  M  K  F  L  R  W  H  L  Y  P  L  *  V  F  V  D </first_frame>
            <second_frame>  R  G  R  M  L  Y  *  F  P  E  D  L  V  I  E  V  W  R  V  K  Y  L  L  P  N  T  H  V  K  T  G  F  L  T  W  A  Y  V  *  A  C  K  L  L  L  L  S  M  L  D  L  F  L  G  C  K  M  R  T  V  Q  S  L  I  P  T  L  R  I  L  V  *  F  S  C  R  R :   V  Q  K  R  I  W  G  V  Q  C  V  L  D  Q  E  E  L  I  F  K  S  E  I  L  N  L  Q  N   : Y  L  A  T  R  A  L  *  M  R  G  T  V  I  D  M  R :   *  I  L  I  W  C  S  N  L  K  M  L  A  F  L  S  L  A  K  M  K  L  V  V  A  W  R :   L  L  S  C  L  I  I  R  T  L  L  A  F  N  F  I  L  N  L  N  Q  G  Q  E  N  R  L  P  C  S  *  :  G  L  *  Q  Q  H  A  G  S  L  I  V  S  *  R  R  V  E  H  R  L  M  D  L  A  M  V  Q  H  L  A  K  N  C  I  E  M  E  M  E  R  L  L  P  M  D  L  *  M  G  F  I  A  M  G  M  V  Y  M  S  K  E  T  V  K  T  L  L  G  S  M  A  L  *  S  I  K  F  C  *  C  L  S  S  S  R  Y  V  *  V  L  Q  L  L  S  L  R  L  S  S  Y  R  A  K  F  R  S  L  L  R  S  C  S  G  S  K  F  N  L  G  I  Y  F  E  R  L  K  N  S  F  D  Y  L  L  Q  H  E  T  C  V  W  *  *  K  I  G  L  L  L  I  R  S  L  *  S  S  *  D  G  I  S  I  H  F  K  F  L  L   </second_frame>
            <third_frame>   G  G  G  C  C  T  S  S  R  R  I  W  *  *  R  C  G  G  *  N  T  C  C  Q  I  R  T  *  K  Q  D  S  L  P  G  H  M  F  R  H  A  N  C  C  Y  *  V  C  *  I  Y  S  W  V  A  R  C  E  Q  Y  R  V  *  S  Q  H  S  E  S  L  C  N  F  H  A  G   : G  F  K  N  A  Y  G  G  Y  N  A  S  W  I  K  K  N  L  F  S  S  Q  R  F  *  I  Y  K  I  :  I  W  Q  P  E  L  C  R  *  E  A  P  S  *  I  *   : G  E  S  *  Y  G  A  A  I  *  R  C  W  P  F  F  H  W  Q  R  *  N  W  S  S  H  G   : D  C  *  A  A  *  S  S  V  L  Y  W  R  S  I  S  S  *  I  *  I  K  A  R  K  T  V  C  R  V  L  R :   A  Y  S  S  S  M  R  A  A  *  L  S  P  E  E  G  W  N  T  D  S  W  T  *  Q  W  Y  S  I  W  R  K  I  A  S  K  W  K  W  N  D  S  C  Q  W  I  F  R  W  D  L  S  Q  W  E  W  C  T  C  L  R  K  Q  *  K  H  Y  W  G  Q  W  P  C  D  R  S  N  F  A  S  A  F  L  P  V  D  M  Y  R  F  Y  S  F  S  R  *  G  Y  L  V  I  E  L  N  S  G  L  C  Y  G  V  V  A  A  A  S  L  I  *  A  F  T  L  N  D  *  K  T  L  L  I  T  C  S  N  M  K  L  V  F  G  S  K  R  L  D  C  S  *  F  D  L  Y  E  V  L  E  M  A  S  L  S  T  L  S  F  C  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="20" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="98233" stop="98460"/>
                    <exon start="98568" stop="98653"/>
                    <exon start="98766" stop="98814"/>
                    <exon start="98960" stop="99040"/>
                    <exon start="99122" stop="99215"/>
                    <exon start="99536" stop="99717"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>717</number_coding_nucleotides>
                  <number_encoded_amino_acids>239</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GADAVLVPGGFGDRGVEGKILAAKYARENRIPYLGICLGMQIAVIEYARSILGLQDANSTEFDPNTPNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVRDSKSTKLFGNQSFVDERHRHRYEVNPDMVQQFEDAGLSFTGKDETGRRMEIVELPNHPYFIGVQFHPEFKSRPGKPSAVFLGLIAAACGQLDCLLKKGGTPTHGLSNGTASGEKLHRNGNGTTLANGSLDGIYRNGNGVHV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="94116" e_stop="94296"/>
            <exon e_start="94384" e_stop="94521"/>
            <exon e_start="95317" e_stop="95396"/>
            <exon e_start="95815" e_stop="95901"/>
            <exon e_start="96022" e_stop="96072"/>
            <exon e_start="96143" e_stop="96260"/>
            <exon e_start="96342" e_stop="96398"/>
            <exon e_start="96524" e_stop="96588"/>
            <exon e_start="96675" e_stop="96758"/>
            <exon e_start="96932" e_stop="96982"/>
            <exon e_start="97096" e_stop="97158"/>
            <exon e_start="97249" e_stop="97300"/>
            <exon e_start="97442" e_stop="97511"/>
            <exon e_start="97583" e_stop="97645"/>
            <exon e_start="97923" e_stop="98012"/>
            <exon e_start="98084" e_stop="98122"/>
            <exon e_start="98233" e_stop="98460"/>
            <exon e_start="98568" e_stop="98653"/>
            <exon e_start="98766" e_stop="98772"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.984" acc_prob="0.939" e_score="1.000"/>
          <exon-intron don_prob="0.947" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.882" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="0.765" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.909" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.317" acc_prob="0.905" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="1.000" e_score="0.962"/>
          <exon-intron don_prob="0.960" acc_prob="0.934" e_score="0.971"/>
          <exon-intron don_prob="0.965" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.957" e_score="1.000"/>
          <exon-intron don_prob="0.043" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.941" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.953" acc_prob="0.921" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="94116" e_stop="94296" e_length="181"/>
          </exon>
          <intron i_serial="1" don_prob="0.984" acc_prob="0.939">
            <gDNA_intron_boundary i_start="94297" i_stop="94383" i_length="87"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="94384" e_stop="94521" e_length="138"/>
          </exon>
          <intron i_serial="2" don_prob="0.947" acc_prob="0.998">
            <gDNA_intron_boundary i_start="94522" i_stop="95316" i_length="795"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="95317" e_stop="95396" e_length="80"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="95397" i_stop="95814" i_length="418"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="95815" e_stop="95901" e_length="87"/>
          </exon>
          <intron i_serial="4" don_prob="0.995" acc_prob="0.982">
            <gDNA_intron_boundary i_start="95902" i_stop="96021" i_length="120"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="96022" e_stop="96072" e_length="51"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="96073" i_stop="96142" i_length="70"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="96143" e_stop="96260" e_length="118"/>
          </exon>
          <intron i_serial="6" don_prob="0.882" acc_prob="0.958">
            <gDNA_intron_boundary i_start="96261" i_stop="96341" i_length="81"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="96342" e_stop="96398" e_length="57"/>
          </exon>
          <intron i_serial="7" don_prob="0.765" acc_prob="0.944">
            <gDNA_intron_boundary i_start="96399" i_stop="96523" i_length="125"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="96524" e_stop="96588" e_length="65"/>
          </exon>
          <intron i_serial="8" don_prob="0.909" acc_prob="0.978">
            <gDNA_intron_boundary i_start="96589" i_stop="96674" i_length="86"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="96675" e_stop="96758" e_length="84"/>
          </exon>
          <intron i_serial="9" don_prob="0.993" acc_prob="0.986">
            <gDNA_intron_boundary i_start="96759" i_stop="96931" i_length="173"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="96932" e_stop="96982" e_length="51"/>
          </exon>
          <intron i_serial="10" don_prob="0.995" acc_prob="0.998">
            <gDNA_intron_boundary i_start="96983" i_stop="97095" i_length="113"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="97096" e_stop="97158" e_length="63"/>
          </exon>
          <intron i_serial="11" don_prob="0.317" acc_prob="0.905">
            <gDNA_intron_boundary i_start="97159" i_stop="97248" i_length="90"/>
          </intron>
          <exon e_serial="12" e_score="0.962">
            <gDNA_exon_boundary e_start="97249" e_stop="97300" e_length="52"/>
          </exon>
          <intron i_serial="12" don_prob="0.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="97301" i_stop="97441" i_length="141"/>
          </intron>
          <exon e_serial="13" e_score="0.971">
            <gDNA_exon_boundary e_start="97442" e_stop="97511" e_length="70"/>
          </exon>
          <intron i_serial="13" don_prob="0.960" acc_prob="0.934">
            <gDNA_intron_boundary i_start="97512" i_stop="97582" i_length="71"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="97583" e_stop="97645" e_length="63"/>
          </exon>
          <intron i_serial="14" don_prob="0.965" acc_prob="0.995">
            <gDNA_intron_boundary i_start="97646" i_stop="97922" i_length="277"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="97923" e_stop="98012" e_length="90"/>
          </exon>
          <intron i_serial="15" don_prob="1.000" acc_prob="0.957">
            <gDNA_intron_boundary i_start="98013" i_stop="98083" i_length="71"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="98084" e_stop="98122" e_length="39"/>
          </exon>
          <intron i_serial="16" don_prob="0.043" acc_prob="0.983">
            <gDNA_intron_boundary i_start="98123" i_stop="98232" i_length="110"/>
          </intron>
          <exon e_serial="17" e_score="1.000">
            <gDNA_exon_boundary e_start="98233" e_stop="98460" e_length="228"/>
          </exon>
          <intron i_serial="17" don_prob="0.941" acc_prob="0.994">
            <gDNA_intron_boundary i_start="98461" i_stop="98567" i_length="107"/>
          </intron>
          <exon e_serial="18" e_score="1.000">
            <gDNA_exon_boundary e_start="98568" e_stop="98653" e_length="86"/>
          </exon>
          <intron i_serial="18" don_prob="0.953" acc_prob="0.921">
            <gDNA_intron_boundary i_start="98654" i_stop="98765" i_length="112"/>
          </intron>
          <exon e_serial="19" e_score="1.000">
            <gDNA_exon_boundary e_start="98766" e_stop="98772" e_length="7"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94116" stop="94296"/>
              <exon start="94384" stop="94521"/>
              <exon start="95317" stop="95396"/>
              <exon start="95815" stop="95901"/>
              <exon start="96022" stop="96072"/>
              <exon start="96143" stop="96165"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307036" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94128" stop="94296"/>
              <exon start="94384" stop="94521"/>
              <exon start="95317" stop="95396"/>
              <exon start="95815" stop="95901"/>
              <exon start="96022" stop="96072"/>
              <exon start="96143" stop="96189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205964" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94128" stop="94296"/>
              <exon start="94384" stop="94521"/>
              <exon start="95317" stop="95396"/>
              <exon start="95815" stop="95856"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209607" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94176" stop="94296"/>
              <exon start="94384" stop="94521"/>
              <exon start="95317" stop="95396"/>
              <exon start="95815" stop="95901"/>
              <exon start="96022" stop="96072"/>
              <exon start="96143" stop="96260"/>
              <exon start="96342" stop="96371"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94176" stop="94296"/>
              <exon start="94384" stop="94521"/>
              <exon start="95317" stop="95396"/>
              <exon start="95815" stop="95901"/>
              <exon start="96022" stop="96072"/>
              <exon start="96143" stop="96246"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324612" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94216" stop="94296"/>
              <exon start="94384" stop="94521"/>
              <exon start="95317" stop="95396"/>
              <exon start="95815" stop="95901"/>
              <exon start="96022" stop="96072"/>
              <exon start="96143" stop="96241"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249404" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96343" stop="96398"/>
              <exon start="96524" stop="96588"/>
              <exon start="96675" stop="96758"/>
              <exon start="96932" stop="96982"/>
              <exon start="97096" stop="97158"/>
              <exon start="97249" stop="97300"/>
              <exon start="97442" stop="97511"/>
              <exon start="97583" stop="97645"/>
              <exon start="97923" stop="98012"/>
              <exon start="98084" stop="98122"/>
              <exon start="98233" stop="98249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252055" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97584" stop="97645"/>
              <exon start="97923" stop="98012"/>
              <exon start="98084" stop="98122"/>
              <exon start="98233" stop="98460"/>
              <exon start="98568" stop="98653"/>
              <exon start="98766" stop="98772"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319359" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATACATATAGCCATAAAGCCGCCATCGCTTCATATTTCATACCTAACAAAGTTTCCGCCATCATTCTCTCCTACCATTCTTCCTTCTCCTTTGCCATTCTCTTTTCCTTCATATCTCAGCAAAGTTTACACACAGCTTGCTGTTCGGTGCGGCGGGTAATTTCAAATCCATCTTTAGTAG : ATTGACGAGGAGAATCAGAGATGAAGTATGTGTTGGTTACAGGAGGAGTGGTTAGCGGGCTCGGTAAAGGAGTTACCGCCAGTAGTATCGGTCTTATCCTTAAGTGCTGTGGTCTTCGCGTTACTTCCATTAAGATAG : ATCCTTACTTGAACACTGATGCTGGAACAATGTCTCCATTTGAGCATGGAGAAGTATTTGTCTTGGACGATGGTGGAGAG : GTGGACCTAGACCTTGGTAACTATGAACGCTTTCTGGATATTAAGTTGACACGTGACAACAATATAACTACTGGAAAAATTTACCAG : TCTGTTCTTGATAAGGAGAGAAAAGGAGATTATTTGGGGAAGACTGTTCAG : GTCGTCCCTCACATTACAGATGCCATTCAAGAGTGGATTGAACGTGTGGCTGTCATACCAGTTGATGGAGAGGATAGTCCAGCTGATGTTTGTGTTATAGAACTGGGTGGAACTATAG : GAGATATTGAGTCTATGCCATTTATTGAAGCTTTAGGACAATTCTCATATCGTGTAG : GTGCTGGAAATTTTTGCTTGATACATGTCAGCCTTGTGCCCGTTTTGAATGTAGTTGGTGAGCAG : AAAACAAAGCCAACTCAACACAGCGTCAGGGGTTTGAGAAGCCTGGGACTGACTCCAAATATTTTAGCCTGCCGGAGCACAACG : GCACTTGATGATAACGTGAAGGAGAAACTTTCCCGTTTTTGCCATGTTCCG : GTTGATAGCATCATCAGTCTTTATGATGCTTCAAACATTTGGCGAGTTCCTTTGATTTTAAGA : GACCAGAAGGCCCATGAAGCAATTCTGAAAGTGCTGAATCTTAAAGGGTAAT : AGTTGCTCGGGAACCTGTCTTTGGAGAATGGACATCTCGGACTGAACTTTGTGACAGACTACATGAGCCA : GTTAGAGTTGCCATGGTGGGAAAGTACACTGGACTTTCAGATTCGTATCTCTCAGTACTGAAG : GCTCTTTTGCATTCCTCTGTAGCTTGCCGCAGGAAACTCTTTGTCGATTGGGTTCCAGCCAGTGACCTTGAAAATGAAACTGCCAAAGAG : AATCCTGAAAATTATAGAAATTCGTGGAATTTGCTGAAG : GGGGCGGATGCTGTACTAGTTCCCGGAGGATTTGGTGATAGAGGTGTGGAGGGTAAAATACTTGCTGCCAAATACGCACGTGAAAACAGGATTCCTTACCTGGGCATATGTTTAGGCATGCAAATTGCTGTTATTGAGTATGCTAGATCTATTCTTGGGTTGCAAGATGCGAACAGTACAGAGTTTGATCCCAACACTCCGAATCCTTGTGTAATTTTCATGCCGGAG : GGTTCAAAAACGCATATGGGGGGTACAATGCGTCTTGGATCAAGAAGAACTTATTTTCAAGTCAGAGATTCTAAATCTACAAAATT : ATTTGGC</gDNA_template>
            <first_frame> N  T  Y  S  H  K  A  A  I  A  S  Y  F  I  P  N  K  V  S  A  I  I  L  S  Y  H  S  S  F  S  F  A  I  L  F  S  F  I  S  Q  Q  S  L  H  T  A  C  C  S  V  R  R  V  I  S  N  P  S  L  V   : D  *  R  G  E  S  E  M  K  Y  V  L  V  T  G  G  V  V  S  G  L  G  K  G  V  T  A  S  S  I  G  L  I  L  K  C  C  G  L  R  V  T  S  I  K  I   : D  P  Y  L  N  T  D  A  G  T  M  S  P  F  E  H  G  E  V  F  V  L  D  D  G  G  E  :  V  D  L  D  L  G  N  Y  E  R  F  L  D  I  K  L  T  R  D  N  N  I  T  T  G  K  I  Y  Q  :  S  V  L  D  K  E  R  K  G  D  Y  L  G  K  T  V  Q  :  V  V  P  H  I  T  D  A  I  Q  E  W  I  E  R  V  A  V  I  P  V  D  G  E  D  S  P  A  D  V  C  V  I  E  L  G  G  T  I   : G  D  I  E  S  M  P  F  I  E  A  L  G  Q  F  S  Y  R  V   : G  A  G  N  F  C  L  I  H  V  S  L  V  P  V  L  N  V  V  G  E  Q  :  K  T  K  P  T  Q  H  S  V  R  G  L  R  S  L  G  L  T  P  N  I  L  A  C  R  S  T  T  :  A  L  D  D  N  V  K  E  K  L  S  R  F  C  H  V  P  :  V  D  S  I  I  S  L  Y  D  A  S  N  I  W  R  V  P  L  I  L  R  :  D  Q  K  A  H  E  A  I  L  K  V  L  N  L  K  G  *   : *  L  L  G  N  L  S  L  E  N  G  H  L  G  L  N  F  V  T  D  Y  M  S  Q :   L  E  L  P  W  W  E  S  T  L  D  F  Q  I  R  I  S  Q  Y  *  R :   L  F  C  I  P  L  *  L  A  A  G  N  S  L  S  I  G  F  Q  P  V  T  L  K  M  K  L  P  K  R :   I  L  K  I  I  E  I  R  G  I  C  *  R :   G  R  M  L  Y  *  F  P  E  D  L  V  I  E  V  W  R  V  K  Y  L  L  P  N  T  H  V  K  T  G  F  L  T  W  A  Y  V  *  A  C  K  L  L  L  L  S  M  L  D  L  F  L  G  C  K  M  R  T  V  Q  S  L  I  P  T  L  R  I  L  V  *  F  S  C  R  R :   V  Q  K  R  I  W  G  V  Q  C  V  L  D  Q  E  E  L  I  F  K  S  E  I  L  N  L  Q  N   : Y  L   </first_frame>
            <second_frame>  I  H  I  A  I  K  P  P  S  L  H  I  S  Y  L  T  K  F  P  P  S  F  S  P  T  I  L  P  S  P  L  P  F  S  F  P  S  Y  L  S  K  V  Y  T  Q  L  A  V  R  C  G  G  *  F  Q  I  H  L  *  *  :  I  D  E  E  N  Q  R  *  S  M  C  W  L  Q  E  E  W  L  A  G  S  V  K  E  L  P  P  V  V  S  V  L  S  L  S  A  V  V  F  A  L  L  P  L  R  *  :  I  L  T  *  T  L  M  L  E  Q  C  L  H  L  S  M  E  K  Y  L  S  W  T  M  V  E  R :   W  T  *  T  L  V  T  M  N  A  F  W  I  L  S  *  H  V  T  T  I  *  L  L  E  K  F  T  S :   L  F  L  I  R  R  E  K  E  I  I  W  G  R  L  F  R :   S  S  L  T  L  Q  M  P  F  K  S  G  L  N  V  W  L  S  Y  Q  L  M  E  R  I  V  Q  L  M  F  V  L  *  N  W  V  E  L  *  :  E  I  L  S  L  C  H  L  L  K  L  *  D  N  S  H  I  V  *  :  V  L  E  I  F  A  *  Y  M  S  A  L  C  P  F  *  M  *  L  V  S  R :   K  Q  S  Q  L  N  T  A  S  G  V  *  E  A  W  D  *  L  Q  I  F  *  P  A  G  A  Q  R :   H  L  M  I  T  *  R  R  N  F  P  V  F  A  M  F  R :   L  I  A  S  S  V  F  M  M  L  Q  T  F  G  E  F  L  *  F  *  E :   T  R  R  P  M  K  Q  F  *  K  C  *  I  L  K  G  N  :  S  C  S  G  T  C  L  W  R  M  D  I  S  D  *  T  L  *  Q  T  T  *  A   : S  *  S  C  H  G  G  K  V  H  W  T  F  R  F  V  S  L  S  T  E   : G  S  F  A  F  L  C  S  L  P  Q  E  T  L  C  R  L  G  S  S  Q  *  P  *  K  *  N  C  Q  R   : E  S  *  K  L  *  K  F  V  E  F  A  E   : G  G  G  C  C  T  S  S  R  R  I  W  *  *  R  C  G  G  *  N  T  C  C  Q  I  R  T  *  K  Q  D  S  L  P  G  H  M  F  R  H  A  N  C  C  Y  *  V  C  *  I  Y  S  W  V  A  R  C  E  Q  Y  R  V  *  S  Q  H  S  E  S  L  C  N  F  H  A  G   : G  F  K  N  A  Y  G  G  Y  N  A  S  W  I  K  K  N  L  F  S  S  Q  R  F  *  I  Y  K  I  :  I  W  </second_frame>
            <third_frame>   Y  I  *  P  *  S  R  H  R  F  I  F  H  T  *  Q  S  F  R  H  H  S  L  L  P  F  F  L  L  L  C  H  S  L  F  L  H  I  S  A  K  F  T  H  S  L  L  F  G  A  A  G  N  F  K  S  I  F  S  R :   L  T  R  R  I  R  D  E  V  C  V  G  Y  R  R  S  G  *  R  A  R  *  R  S  Y  R  Q  *  Y  R  S  Y  P  *  V  L  W  S  S  R  Y  F  H  *  D  R :   S  L  L  E  H  *  C  W  N  N  V  S  I  *  A  W  R  S  I  C  L  G  R  W  W  R   : G  G  P  R  P  W  *  L  *  T  L  S  G  Y  *  V  D  T  *  Q  Q  Y  N  Y  W  K  N  L  P   : V  C  S  *  *  G  E  K  R  R  L  F  G  E  D  C  S   : G  R  P  S  H  Y  R  C  H  S  R  V  D  *  T  C  G  C  H  T  S  *  W  R  G  *  S  S  *  C  L  C  Y  R  T  G  W  N  Y  R :   R  Y  *  V  Y  A  I  Y  *  S  F  R  T  I  L  I  S  C  R :   C  W  K  F  L  L  D  T  C  Q  P  C  A  R  F  E  C  S  W  *  A   : E  N  K  A  N  S  T  Q  R  Q  G  F  E  K  P  G  T  D  S  K  Y  F  S  L  P  E  H  N   : G  T  *  *  *  R  E  G  E  T  F  P  F  L  P  C  S   : G  *  *  H  H  Q  S  L  *  C  F  K  H  L  A  S  S  F  D  F  K   : R  P  E  G  P  *  S  N  S  E  S  A  E  S  *  R  V  I :   V  A  R  E  P  V  F  G  E  W  T  S  R  T  E  L  C  D  R  L  H  E  P  :  V  R  V  A  M  V  G  K  Y  T  G  L  S  D  S  Y  L  S  V  L  K  :  A  L  L  H  S  S  V  A  C  R  R  K  L  F  V  D  W  V  P  A  S  D  L  E  N  E  T  A  K  E  :  N  P  E  N  Y  R  N  S  W  N  L  L  K  :  G  A  D  A  V  L  V  P  G  G  F  G  D  R  G  V  E  G  K  I  L  A  A  K  Y  A  R  E  N  R  I  P  Y  L  G  I  C  L  G  M  Q  I  A  V  I  E  Y  A  R  S  I  L  G  L  Q  D  A  N  S  T  E  F  D  P  N  T  P  N  P  C  V  I  F  M  P  E  :  G  S  K  T  H  M  G  G  T  M  R  L  G  S  R  R  T  Y  F  Q  V  R  D  S  K  S  T  K  L :   F  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="20" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94389" stop="94521"/>
                    <exon start="95317" stop="95396"/>
                    <exon start="95815" stop="95901"/>
                    <exon start="96022" stop="96072"/>
                    <exon start="96143" stop="96260"/>
                    <exon start="96342" stop="96398"/>
                    <exon start="96524" stop="96588"/>
                    <exon start="96675" stop="96758"/>
                    <exon start="96932" stop="96982"/>
                    <exon start="97096" stop="97158"/>
                    <exon start="97249" stop="97299"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>837</number_coding_nucleotides>
                  <number_encoded_amino_acids>279</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RGESEMKYVLVTGGVVSGLGKGVTASSIGLILKCCGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQSVLDKERKGDYLGKTVQVVPHITDAIQEWIERVAVIPVDGEDSPADVCVIELGGTIGDIESMPFIEALGQFSYRVGAGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRSLGLTPNILACRSTTALDDNVKEKLSRFCHVPVDSIISLYDASNIWRVPLILRDQKAHEAILKVLNLKG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="20" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97293" stop="97300"/>
                    <exon start="97442" stop="97511"/>
                    <exon start="97583" stop="97645"/>
                    <exon start="97923" stop="98012"/>
                    <exon start="98084" stop="98122"/>
                    <exon start="98233" stop="98460"/>
                    <exon start="98568" stop="98653"/>
                    <exon start="98766" stop="98772"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>591</number_coding_nucleotides>
                  <number_encoded_amino_acids>197</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RVIVAREPVFGEWTSRTELCDRLHEPVRVAMVGKYTGLSDSYLSVLKALLHSSVACRRKLFVDWVPASDLENETAKENPENYRNSWNLLKGADAVLVPGGFGDRGVEGKILAAKYARENRIPYLGICLGMQIAVIEYARSILGLQDANSTEFDPNTPNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVRDSKSTKLFG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="95812" e_stop="95901"/>
            <exon e_start="96022" e_stop="96072"/>
            <exon e_start="96143" e_stop="96260"/>
            <exon e_start="96342" e_stop="96398"/>
            <exon e_start="96524" e_stop="96588"/>
            <exon e_start="96675" e_stop="96758"/>
            <exon e_start="96932" e_stop="96982"/>
            <exon e_start="97096" e_stop="97158"/>
            <exon e_start="97249" e_stop="97295"/>
            <exon e_start="97442" e_stop="97475"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.982" e_score="0.989"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.882" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="0.765" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.909" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.317" acc_prob="0.905" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="95812" e_stop="95901" e_length="90"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.982">
            <gDNA_intron_boundary i_start="95902" i_stop="96021" i_length="120"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="96022" e_stop="96072" e_length="51"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="96073" i_stop="96142" i_length="70"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="96143" e_stop="96260" e_length="118"/>
          </exon>
          <intron i_serial="3" don_prob="0.882" acc_prob="0.958">
            <gDNA_intron_boundary i_start="96261" i_stop="96341" i_length="81"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="96342" e_stop="96398" e_length="57"/>
          </exon>
          <intron i_serial="4" don_prob="0.765" acc_prob="0.944">
            <gDNA_intron_boundary i_start="96399" i_stop="96523" i_length="125"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="96524" e_stop="96588" e_length="65"/>
          </exon>
          <intron i_serial="5" don_prob="0.909" acc_prob="0.978">
            <gDNA_intron_boundary i_start="96589" i_stop="96674" i_length="86"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="96675" e_stop="96758" e_length="84"/>
          </exon>
          <intron i_serial="6" don_prob="0.993" acc_prob="0.986">
            <gDNA_intron_boundary i_start="96759" i_stop="96931" i_length="173"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="96932" e_stop="96982" e_length="51"/>
          </exon>
          <intron i_serial="7" don_prob="0.995" acc_prob="0.998">
            <gDNA_intron_boundary i_start="96983" i_stop="97095" i_length="113"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="97096" e_stop="97158" e_length="63"/>
          </exon>
          <intron i_serial="8" don_prob="0.317" acc_prob="0.905">
            <gDNA_intron_boundary i_start="97159" i_stop="97248" i_length="90"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="97249" e_stop="97295" e_length="47"/>
          </exon>
          <intron i_serial="9" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="97296" i_stop="97441" i_length="146"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="97442" e_stop="97475" e_length="34"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95812" stop="95901"/>
              <exon start="96022" stop="96072"/>
              <exon start="96143" stop="96260"/>
              <exon start="96342" stop="96398"/>
              <exon start="96524" stop="96588"/>
              <exon start="96675" stop="96758"/>
              <exon start="96932" stop="96982"/>
              <exon start="97096" stop="97158"/>
              <exon start="97249" stop="97295"/>
              <exon start="97442" stop="97475"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208104" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGGTGGACCTAGACCTTGGTAACTATGAACGCTTTCTGGATATTAAGTTGACACGTGACAACAATATAACTACTGGAAAAATTTACCAG : TCTGTTCTTGATAAGGAGAGAAAAGGAGATTATTTGGGGAAGACTGTTCAG : GTCGTCCCTCACATTACAGATGCCATTCAAGAGTGGATTGAACGTGTGGCTGTCATACCAGTTGATGGAGAGGATAGTCCAGCTGATGTTTGTGTTATAGAACTGGGTGGAACTATAG : GAGATATTGAGTCTATGCCATTTATTGAAGCTTTAGGACAATTCTCATATCGTGTAG : GTGCTGGAAATTTTTGCTTGATACATGTCAGCCTTGTGCCCGTTTTGAATGTAGTTGGTGAGCAG : AAAACAAAGCCAACTCAACACAGCGTCAGGGGTTTGAGAAGCCTGGGACTGACTCCAAATATTTTAGCCTGCCGGAGCACAACG : GCACTTGATGATAACGTGAAGGAGAAACTTTCCCGTTTTTGCCATGTTCCG : GTTGATAGCATCATCAGTCTTTATGATGCTTCAAACATTTGGCGAGTTCCTTTGATTTTAAGA : GACCAGAAGGCCCATGAAGCAATTCTGAAAGTGCTGAATCTTAAAGG : AGTTGCTCGGGAACCTGTCTTTGGAGAATGGACA</gDNA_template>
            <first_frame> *  V  D  L  D  L  G  N  Y  E  R  F  L  D  I  K  L  T  R  D  N  N  I  T  T  G  K  I  Y  Q  :  S  V  L  D  K  E  R  K  G  D  Y  L  G  K  T  V  Q  :  V  V  P  H  I  T  D  A  I  Q  E  W  I  E  R  V  A  V  I  P  V  D  G  E  D  S  P  A  D  V  C  V  I  E  L  G  G  T  I   : G  D  I  E  S  M  P  F  I  E  A  L  G  Q  F  S  Y  R  V   : G  A  G  N  F  C  L  I  H  V  S  L  V  P  V  L  N  V  V  G  E  Q  :  K  T  K  P  T  Q  H  S  V  R  G  L  R  S  L  G  L  T  P  N  I  L  A  C  R  S  T  T  :  A  L  D  D  N  V  K  E  K  L  S  R  F  C  H  V  P  :  V  D  S  I  I  S  L  Y  D  A  S  N  I  W  R  V  P  L  I  L  R  :  D  Q  K  A  H  E  A  I  L  K  V  L  N  L  K  G :   V  A  R  E  P  V  F  G  E  W  T </first_frame>
            <second_frame>  R  W  T  *  T  L  V  T  M  N  A  F  W  I  L  S  *  H  V  T  T  I  *  L  L  E  K  F  T  S :   L  F  L  I  R  R  E  K  E  I  I  W  G  R  L  F  R :   S  S  L  T  L  Q  M  P  F  K  S  G  L  N  V  W  L  S  Y  Q  L  M  E  R  I  V  Q  L  M  F  V  L  *  N  W  V  E  L  *  :  E  I  L  S  L  C  H  L  L  K  L  *  D  N  S  H  I  V  *  :  V  L  E  I  F  A  *  Y  M  S  A  L  C  P  F  *  M  *  L  V  S  R :   K  Q  S  Q  L  N  T  A  S  G  V  *  E  A  W  D  *  L  Q  I  F  *  P  A  G  A  Q  R :   H  L  M  I  T  *  R  R  N  F  P  V  F  A  M  F  R :   L  I  A  S  S  V  F  M  M  L  Q  T  F  G  E  F  L  *  F  *  E :   T  R  R  P  M  K  Q  F  *  K  C  *  I  L  K   : E  L  L  G  N  L  S  L  E  N  G   </second_frame>
            <third_frame>   G  G  P  R  P  W  *  L  *  T  L  S  G  Y  *  V  D  T  *  Q  Q  Y  N  Y  W  K  N  L  P   : V  C  S  *  *  G  E  K  R  R  L  F  G  E  D  C  S   : G  R  P  S  H  Y  R  C  H  S  R  V  D  *  T  C  G  C  H  T  S  *  W  R  G  *  S  S  *  C  L  C  Y  R  T  G  W  N  Y  R :   R  Y  *  V  Y  A  I  Y  *  S  F  R  T  I  L  I  S  C  R :   C  W  K  F  L  L  D  T  C  Q  P  C  A  R  F  E  C  S  W  *  A   : E  N  K  A  N  S  T  Q  R  Q  G  F  E  K  P  G  T  D  S  K  Y  F  S  L  P  E  H  N   : G  T  *  *  *  R  E  G  E  T  F  P  F  L  P  C  S   : G  *  *  H  H  Q  S  L  *  C  F  K  H  L  A  S  S  F  D  F  K   : R  P  E  G  P  *  S  N  S  E  S  A  E  S  *  R  :  S  C  S  G  T  C  L  W  R  M  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="20" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="95815" stop="95901"/>
                    <exon start="96022" stop="96072"/>
                    <exon start="96143" stop="96260"/>
                    <exon start="96342" stop="96398"/>
                    <exon start="96524" stop="96588"/>
                    <exon start="96675" stop="96758"/>
                    <exon start="96932" stop="96982"/>
                    <exon start="97096" stop="97158"/>
                    <exon start="97249" stop="97295"/>
                    <exon start="97442" stop="97475"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>657</number_coding_nucleotides>
                  <number_encoded_amino_acids>219</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VDLDLGNYERFLDIKLTRDNNITTGKIYQSVLDKERKGDYLGKTVQVVPHITDAIQEWIERVAVIPVDGEDSPADVCVIELGGTIGDIESMPFIEALGQFSYRVGAGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRSLGLTPNILACRSTTALDDNVKEKLSRFCHVPVDSIISLYDASNIWRVPLILRDQKAHEAILKVLNLKGVAREPVFGEWT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="+" PGL_start="100369" PGL_stop="104290"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="100369" e_stop="100610"/>
            <exon e_start="101697" e_stop="101966"/>
            <exon e_start="103990" e_stop="104229"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="100369" e_stop="100610" e_length="242"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.992">
            <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="101697" e_stop="101966" e_length="270"/>
          </exon>
          <intron i_serial="2" don_prob="0.961" acc_prob="0.992">
            <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="103990" e_stop="104229" e_length="240"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100369" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104138"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316464" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100389" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723894" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100389" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104200"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723320" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100393" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104211"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723155" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100394" stop="100610"/>
              <exon start="101697" stop="101801"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289863" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100395" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104138"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734433" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100402" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104182"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735716" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100402" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104090"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312608" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100404" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104229"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735258" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100405" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104206"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346081" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100405" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104088"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100408" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104200"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716924" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100409" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104090"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312439" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100415" stop="100610"/>
              <exon start="101697" stop="101961"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299125" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100417" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104212"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E541059" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100417" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E541057" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100418" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104018"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294908" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100418" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104018"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294907" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100418" stop="100610"/>
              <exon start="101697" stop="101772"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295633" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100477" stop="100610"/>
              <exon start="101697" stop="101880"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296617" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100586" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715956" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101703" stop="101966"/>
              <exon start="103990" stop="104170"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E234720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101721" stop="101966"/>
              <exon start="103990" stop="104215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285783" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101787" stop="101966"/>
              <exon start="103990" stop="104170"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235008" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGATTCGTGTGAAAGAAGACTTCACAGGAAAGTGAGGATGTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTG : CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG : AAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAGATGTGGTTTTCAATTGCATCTACTTAGTAATCATTGCAGAGT</gDNA_template>
            <first_frame> *  F  V  *  K  K  T  S  Q  E  S  E  D  V  A  R  N  F  A  S  M  A  T  P  L  R  Y  Q  E  Y  Y  N  L  G  S  S  T  Y  D  R  C  L  S  V  V  S  Y  G  S  F  R  S  C  S  S  E  L  G  H  S  Q  *  L  N  C  Y  R  Q  T  G  W  T  V  K  I  P  S  L  S  I  C :   S  G  S  *  L  E  V  Y  A  G  *  G  C  H  I  T  K  N  R  V  V  H  E  G  D  Q  G  I  S  S  M  R  I  L  K  Y  S  G  S  D  I  K  S  T  K  C  T  L  R  D  T  K  Y  P  *  K  *  S  T  S  S  R  I  E  G  V  F  Q  L  A  N  L  S  T  T  L  H  *  W  R  V  L  W  W  L  *  H  C  C  R :   S  I  Q  E  R  R  V  A  R  I  A  R  K  D  I  V  L  L  M  D  S  D  V  I  S  P  L  L  N  C  M  D  Y  Q  V  S  V  V  L  T  A  D  D  E  N  I  L  L  C  L  F  P  L  Q  G  L  N  F  K  I  *  I  H  L  G  R  C  G  F  Q  L  H  L  L  S  N  H  C  R   </first_frame>
            <second_frame>  D  S  C  E  R  R  L  H  R  K  V  R  M  S  L  G  I  S  L  Q  W  Q  L  P  S  V  I  R  S  T  T  T  S  A  A  Q  R  T  T  D  V  F  L  S  F  P  T  V  H  S  G  R  A  L  Q  S  S  A  I  P  S  S  S  I  A  T  G  K  R  D  G  R  L  R  S  L  R  C  L  S   : A  L  D  P  N  L  K  S  T  L  D  K  V  V  T  S  Q  K  I  V  L  F  M  K  G  T  K  E  F  P  Q  C  G  F  S  N  T  V  V  Q  I  L  K  A  L  N  A  P  F  E  T  L  N  I  L  E  N  E  A  L  R  Q  G  L  K  E  Y  S  S  W  P  T  F  P  Q  L  Y  I  D  G  E  F  F  G  G  C  D  I  V  V   : E  A  Y  K  S  G  E  L  Q  E  L  L  E  R  T  L  C  S  *  W  I  Q  M  *  *  A  H  Y  *  I  V  W  T  I  R  C  L  L  F  L  L  Q  M  M  K  I  F  Y  Y  V  Y  F  L  F  K  D  *  T  L  R  Y  E  Y  I  L  E  D  V  V  F  N  C  I  Y  L  V  I  I  A  E  </second_frame>
            <third_frame>   I  R  V  K  E  D  F  T  G  K  *  G  C  R  S  E  F  R  F  N  G  N  S  P  P  L  S  G  V  L  Q  P  R  Q  L  N  V  R  P  M  S  F  C  R  F  L  R  F  I  P  V  V  L  F  R  A  R  P  F  P  V  A  Q  L  L  P  A  N  G  M  D  G  *  D  P  F  V  V  Y  L  :  L  W  I  L  T  *  S  L  R  W  I  R  L  S  H  H  K  K  S  C  C  S  *  R  G  P  R  N  F  L  N  A  D  S  Q  I  Q  W  F  R  Y  *  K  H  *  M  H  P  S  R  H  *  I  S  L  K  M  K  H  F  V  K  D  *  R  S  I  P  V  G  Q  P  F  H  N  S  T  L  M  E  S  S  L  V  A  V  T  L  L  *  :  K  H  T  R  A  E  S  C  K  N  C  *  K  G  H  C  A  P  D  G  F  R  C  N  K  P  I  I  K  L  Y  G  L  S  G  V  C  C  S  Y  C  R  *  *  K  Y  F  T  M  F  I  S  S  S  R  T  E  L  *  D  M  N  T  S  W  K  M  W  F  S  I  A  S  T  *  *  S  L  Q  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100370" stop="100610"/>
                    <exon start="101697" stop="101966"/>
                    <exon start="103990" stop="104045"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>564</number_coding_nucleotides>
                  <number_encoded_amino_acids>188</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DSCERRLHRKVRMSLGISLQWQLPSVIRSTTTSAAQRTTDVFLSFPTVHSGRALQSSAIPSSSIATGKRDGRLRSLRCLSALDPNLKSTLDKVVTSQKIVLFMKGTKEFPQCGFSNTVVQILKALNAPFETLNILENEALRQGLKEYSSWPTFPQLYIDGEFFGGCDIVVEAYKSGELQELLERTLCS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="100369" e_stop="100610"/>
            <exon e_start="101697" e_stop="101966"/>
            <exon e_start="103990" e_stop="104189"/>
            <exon e_start="104278" e_stop="104290"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.712" e_score="1.000"/>
          <exon-only e_score="0.615"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="100369" e_stop="100610" e_length="242"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.992">
            <gDNA_intron_boundary i_start="100611" i_stop="101696" i_length="1086"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="101697" e_stop="101966" e_length="270"/>
          </exon>
          <intron i_serial="2" don_prob="0.961" acc_prob="0.992">
            <gDNA_intron_boundary i_start="101967" i_stop="103989" i_length="2023"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="103990" e_stop="104189" e_length="200"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.712">
            <gDNA_intron_boundary i_start="104190" i_stop="104277" i_length="88"/>
          </intron>
          <exon e_serial="4" e_score="0.615">
            <gDNA_exon_boundary e_start="104278" e_stop="104290" e_length="13"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100369" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104138"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316464" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100381" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104189"/>
              <exon start="104278" stop="104290"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712253" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100394" stop="100610"/>
              <exon start="101697" stop="101801"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289863" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100395" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104138"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734433" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100402" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104182"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735716" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100402" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104090"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312608" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100405" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104088"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100409" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104090"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312439" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100415" stop="100610"/>
              <exon start="101697" stop="101961"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299125" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100418" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104018"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294908" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100418" stop="100610"/>
              <exon start="101697" stop="101966"/>
              <exon start="103990" stop="104018"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294907" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100418" stop="100610"/>
              <exon start="101697" stop="101772"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295633" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100477" stop="100610"/>
              <exon start="101697" stop="101880"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296617" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101703" stop="101966"/>
              <exon start="103990" stop="104170"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E234720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101745" stop="101966"/>
              <exon start="103990" stop="104189"/>
              <exon start="104278" stop="104289"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217742" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101776" stop="101966"/>
              <exon start="103990" stop="104189"/>
              <exon start="104278" stop="104289"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217606" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101787" stop="101966"/>
              <exon start="103990" stop="104170"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235008" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGATTCGTGTGAAAGAAGACTTCACAGGAAAGTGAGGATGTCGCTCGGAATTTCGCTTCAATGGCAACTCCCCTCCGTTATCAGGAGTACTACAACCTCGGCAGCTCAACGTACGACCGATGTCTTTCTGTCGTTTCCTACGGTTCATTCCGGTCGTGCTCTTCAGAGCTCGGCCATTCCCAGTAGCTCAATTGCTACCGGCAAACGGGATGGACGGTTAAGATCCCTTCGTTGTCTATCTG : CTCTGGATCCTAACTTGAAGTCTACGCTGGATAAGGTTGTCACATCACAAAAAATCGTGTTGTTCATGAAGGGGACCAAGGAATTTCCTCAATGCGGATTCTCAAATACAGTGGTTCAGATATTAAAAGCACTAAATGCACCCTTCGAGACACTAAATATCCTTGAAAATGAAGCACTTCGTCAAGGATTGAAGGAGTATTCCAGTTGGCCAACCTTTCCACAACTCTACATTGATGGAGAGTTCTTTGGTGGCTGTGACATTGTTGTAG : AAGCATACAAGAGCGGAGAGTTGCAAGAATTGCTAGAAAGGACATTGTGCTCCTGATGGATTCAGATGTAATAAGCCCATTATTAAATTGTATGGACTATCAGGTGTCTGTTGTTCTTACTGCAGATGATGAAAATATTTTACTATGTTTATTTCCTCTTCAAGGACTGAACTTTAAGATATGAATACATCTTGGAAGAT : GTAAAAAATGGAA</gDNA_template>
            <first_frame> *  F  V  *  K  K  T  S  Q  E  S  E  D  V  A  R  N  F  A  S  M  A  T  P  L  R  Y  Q  E  Y  Y  N  L  G  S  S  T  Y  D  R  C  L  S  V  V  S  Y  G  S  F  R  S  C  S  S  E  L  G  H  S  Q  *  L  N  C  Y  R  Q  T  G  W  T  V  K  I  P  S  L  S  I  C :   S  G  S  *  L  E  V  Y  A  G  *  G  C  H  I  T  K  N  R  V  V  H  E  G  D  Q  G  I  S  S  M  R  I  L  K  Y  S  G  S  D  I  K  S  T  K  C  T  L  R  D  T  K  Y  P  *  K  *  S  T  S  S  R  I  E  G  V  F  Q  L  A  N  L  S  T  T  L  H  *  W  R  V  L  W  W  L  *  H  C  C  R :   S  I  Q  E  R  R  V  A  R  I  A  R  K  D  I  V  L  L  M  D  S  D  V  I  S  P  L  L  N  C  M  D  Y  Q  V  S  V  V  L  T  A  D  D  E  N  I  L  L  C  L  F  P  L  Q  G  L  N  F  K  I  *  I  H  L  G  R   : C  K  K  W   </first_frame>
            <second_frame>  D  S  C  E  R  R  L  H  R  K  V  R  M  S  L  G  I  S  L  Q  W  Q  L  P  S  V  I  R  S  T  T  T  S  A  A  Q  R  T  T  D  V  F  L  S  F  P  T  V  H  S  G  R  A  L  Q  S  S  A  I  P  S  S  S  I  A  T  G  K  R  D  G  R  L  R  S  L  R  C  L  S   : A  L  D  P  N  L  K  S  T  L  D  K  V  V  T  S  Q  K  I  V  L  F  M  K  G  T  K  E  F  P  Q  C  G  F  S  N  T  V  V  Q  I  L  K  A  L  N  A  P  F  E  T  L  N  I  L  E  N  E  A  L  R  Q  G  L  K  E  Y  S  S  W  P  T  F  P  Q  L  Y  I  D  G  E  F  F  G  G  C  D  I  V  V   : E  A  Y  K  S  G  E  L  Q  E  L  L  E  R  T  L  C  S  *  W  I  Q  M  *  *  A  H  Y  *  I  V  W  T  I  R  C  L  L  F  L  L  Q  M  M  K  I  F  Y  Y  V  Y  F  L  F  K  D  *  T  L  R  Y  E  Y  I  L  E  D  :  V  K  N  G  </second_frame>
            <third_frame>   I  R  V  K  E  D  F  T  G  K  *  G  C  R  S  E  F  R  F  N  G  N  S  P  P  L  S  G  V  L  Q  P  R  Q  L  N  V  R  P  M  S  F  C  R  F  L  R  F  I  P  V  V  L  F  R  A  R  P  F  P  V  A  Q  L  L  P  A  N  G  M  D  G  *  D  P  F  V  V  Y  L  :  L  W  I  L  T  *  S  L  R  W  I  R  L  S  H  H  K  K  S  C  C  S  *  R  G  P  R  N  F  L  N  A  D  S  Q  I  Q  W  F  R  Y  *  K  H  *  M  H  P  S  R  H  *  I  S  L  K  M  K  H  F  V  K  D  *  R  S  I  P  V  G  Q  P  F  H  N  S  T  L  M  E  S  S  L  V  A  V  T  L  L  *  :  K  H  T  R  A  E  S  C  K  N  C  *  K  G  H  C  A  P  D  G  F  R  C  N  K  P  I  I  K  L  Y  G  L  S  G  V  C  C  S  Y  C  R  *  *  K  Y  F  T  M  F  I  S  S  S  R  T  E  L  *  D  M  N  T  S  W  K  M :   *  K  M  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="21" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100370" stop="100610"/>
                    <exon start="101697" stop="101966"/>
                    <exon start="103990" stop="104045"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>564</number_coding_nucleotides>
                  <number_encoded_amino_acids>188</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DSCERRLHRKVRMSLGISLQWQLPSVIRSTTTSAAQRTTDVFLSFPTVHSGRALQSSAIPSSSIATGKRDGRLRSLRCLSALDPNLKSTLDKVVTSQKIVLFMKGTKEFPQCGFSNTVVQILKALNAPFETLNILENEALRQGLKEYSSWPTFPQLYIDGEFFGGCDIVVEAYKSGELQELLERTLCS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="-" PGL_start="110730" PGL_stop="109505"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="110730" e_stop="110431"/>
            <exon e_start="110282" e_stop="110112"/>
            <exon e_start="109701" e_stop="109505"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.990" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.915" acc_prob="0.956" e_score="0.994"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="110730" e_stop="110431" e_length="300"/>
          </exon>
          <intron i_serial="1" don_prob="0.990" acc_prob="1.000">
            <gDNA_intron_boundary i_start="110430" i_stop="110283" i_length="148"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="110282" e_stop="110112" e_length="171"/>
          </exon>
          <intron i_serial="2" don_prob="0.915" acc_prob="0.956">
            <gDNA_intron_boundary i_start="110111" i_stop="109702" i_length="410"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="109701" e_stop="109505" e_length="197"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110730" stop="110431"/>
              <exon start="110282" stop="110112"/>
              <exon start="109701" stop="109505"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376865" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110730" stop="110431"/>
              <exon start="110282" stop="110151"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231693" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATCTCGTCGGAGACGACTCTCTCCCCACCGCGCACTCATCGCCACCGCAGCTTTCACTGTCGTCGGACTATTGATCCTAACTTTGAGGTCCGTCGATCCGTCCACTCAGCTTCCAATCACCACCTCTGAAAACGTGAATGCTAAGCCAGCAGATACAAATCTTCACTCGAACCACTCCGATGCTCAACCACTAAAAACATGCGCAACCGTGGAGGAGATGGGCGAGGTGTTTCGCAGCGGGTTTTGGAAGGAAAGTTACAGAGTGAGGAAAATCATCGAAAGTCACTTTGCTATTAATG : GTGCTTCGAGAGTTCGAGCTCTTCCGCCGGAGGAGTTCTGCAGACATGGTTTCGTGTTGGGAAAAGCATCAGAAGCAGGTTTTGGTAATGAGATGTACAAAATCTTAACTGCCGGAGCACTGAGTGTGATGTTGAACCGGTCGTTGATAATTGGGCAATCCAGGCATATTG : GGGTAGATTTCCTTTTGAGGATTTCATCTCTTACTCCAATCTTACCTTCACATTGAAAGAAATCAAGCACCTTTGGAGACAAAATGGTTGTCTGACCAAATATGGGAGGCATCTTGTTATCAGAATTGATGATTTCCAGAAGCCAGCACGAACTAATGTTCTGTGTAGCAATTGGAGGGTCTGGGAACAACCTATTA</gDNA_template>
            <first_frame> D  L  V  G  D  D  S  L  P  T  A  H  S  S  P  P  Q  L  S  L  S  S  D  Y  *  S  *  L  *  G  P  S  I  R  P  L  S  F  Q  S  P  P  L  K  T  *  M  L  S  Q  Q  I  Q  I  F  T  R  T  T  P  M  L  N  H  *  K  H  A  Q  P  W  R  R  W  A  R  C  F  A  A  G  F  G  R  K  V  T  E  *  G  K  S  S  K  V  T  L  L  L  M  :  V  L  R  E  F  E  L  F  R  R  R  S  S  A  D  M  V  S  C  W  E  K  H  Q  K  Q  V  L  V  M  R  C  T  K  S  *  L  P  E  H  *  V  *  C  *  T  G  R  *  *  L  G  N  P  G  I  L  :  G  *  I  S  F  *  G  F  H  L  L  L  Q  S  Y  L  H  I  E  R  N  Q  A  P  L  E  T  K  W  L  S  D  Q  I  W  E  A  S  C  Y  Q  N  *  *  F  P  E  A  S  T  N  *  C  S  V  *  Q  L  E  G  L  G  T  T  Y   </first_frame>
            <second_frame>  I  S  S  E  T  T  L  S  P  P  R  T  H  R  H  R  S  F  H  C  R  R  T  I  D  P  N  F  E  V  R  R  S  V  H  S  A  S  N  H  H  L  *  K  R  E  C  *  A  S  R  Y  K  S  S  L  E  P  L  R  C  S  T  T  K  N  M  R  N  R  G  G  D  G  R  G  V  S  Q  R  V  L  E  G  K  L  Q  S  E  E  N  H  R  K  S  L  C  Y  *  W :   C  F  E  S  S  S  S  S  A  G  G  V  L  Q  T  W  F  R  V  G  K  S  I  R  S  R  F  W  *  *  D  V  Q  N  L  N  C  R  S  T  E  C  D  V  E  P  V  V  D  N  W  A  I  Q  A  Y  W :   G  R  F  P  F  E  D  F  I  S  Y  S  N  L  T  F  T  L  K  E  I  K  H  L  W  R  Q  N  G  C  L  T  K  Y  G  R  H  L  V  I  R  I  D  D  F  Q  K  P  A  R  T  N  V  L  C  S  N  W  R  V  W  E  Q  P  I  </second_frame>
            <third_frame>   S  R  R  R  R  L  S  P  H  R  A  L  I  A  T  A  A  F  T  V  V  G  L  L  I  L  T  L  R  S  V  D  P  S  T  Q  L  P  I  T  T  S  E  N  V  N  A  K  P  A  D  T  N  L  H  S  N  H  S  D  A  Q  P  L  K  T  C  A  T  V  E  E  M  G  E  V  F  R  S  G  F  W  K  E  S  Y  R  V  R  K  I  I  E  S  H  F  A  I  N   : G  A  S  R  V  R  A  L  P  P  E  E  F  C  R  H  G  F  V  L  G  K  A  S  E  A  G  F  G  N  E  M  Y  K  I  L  T  A  G  A  L  S  V  M  L  N  R  S  L  I  I  G  Q  S  R  H  I   : G  V  D  F  L  L  R  I  S  S  L  T  P  I  L  P  S  H  *  K  K  S  S  T  F  G  D  K  M  V  V  *  P  N  M  G  G  I  L  L  S  E  L  M  I  S  R  S  Q  H  E  L  M  F  C  V  A  I  G  G  S  G  N  N  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="-"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="110728" stop="110431"/>
                    <exon start="110282" stop="110112"/>
                    <exon start="109701" stop="109646"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>522</number_coding_nucleotides>
                  <number_encoded_amino_acids>174</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SRRRRLSPHRALIATAAFTVVGLLILTLRSVDPSTQLPITTSENVNAKPADTNLHSNHSDAQPLKTCATVEEMGEVFRSGFWKESYRVRKIIESHFAINGASRVRALPPEEFCRHGFVLGKASEAGFGNEMYKILTAGALSVMLNRSLIIGQSRHIGVDFLLRISSLTPILPSH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="+" PGL_start="114374" PGL_stop="118608"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="114374" e_stop="114523"/>
            <exon e_start="115339" e_stop="116458"/>
            <exon e_start="116563" e_stop="116701"/>
            <exon e_start="117422" e_stop="117612"/>
            <exon e_start="118017" e_stop="118124"/>
            <exon e_start="118215" e_stop="118418"/>
            <exon e_start="118566" e_stop="118608"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.978" acc_prob="0.999" e_score="0.993"/>
          <exon-intron don_prob="0.999" acc_prob="0.791" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.836" e_score="1.000"/>
          <exon-intron don_prob="0.945" acc_prob="0.897" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.866" e_score="0.995"/>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="114374" e_stop="114523" e_length="150"/>
          </exon>
          <intron i_serial="1" don_prob="0.978" acc_prob="0.999">
            <gDNA_intron_boundary i_start="114524" i_stop="115338" i_length="815"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="115339" e_stop="116458" e_length="1120"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.791">
            <gDNA_intron_boundary i_start="116459" i_stop="116562" i_length="104"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="116563" e_stop="116701" e_length="139"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="0.972">
            <gDNA_intron_boundary i_start="116702" i_stop="117421" i_length="720"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="117422" e_stop="117612" e_length="191"/>
          </exon>
          <intron i_serial="4" don_prob="0.993" acc_prob="0.836">
            <gDNA_intron_boundary i_start="117613" i_stop="118016" i_length="404"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="118017" e_stop="118124" e_length="108"/>
          </exon>
          <intron i_serial="5" don_prob="0.945" acc_prob="0.897">
            <gDNA_intron_boundary i_start="118125" i_stop="118214" i_length="90"/>
          </intron>
          <exon e_serial="6" e_score="0.995">
            <gDNA_exon_boundary e_start="118215" e_stop="118418" e_length="204"/>
          </exon>
          <intron i_serial="6" don_prob="0.976" acc_prob="0.866">
            <gDNA_intron_boundary i_start="118419" i_stop="118565" i_length="147"/>
          </intron>
          <exon e_serial="7" e_score="0.977">
            <gDNA_exon_boundary e_start="118566" e_stop="118608" e_length="43"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114374" stop="114523"/>
              <exon start="115339" stop="115602"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331390" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114436" stop="114523"/>
              <exon start="115339" stop="115887"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545875" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114437" stop="114523"/>
              <exon start="115339" stop="115732"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115871" stop="116422"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339564" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116338" stop="116458"/>
              <exon start="116563" stop="116701"/>
              <exon start="117422" stop="117612"/>
              <exon start="118017" stop="118124"/>
              <exon start="118215" stop="118418"/>
              <exon start="118566" stop="118608"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538021" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116339" stop="116458"/>
              <exon start="116563" stop="116701"/>
              <exon start="117422" stop="117612"/>
              <exon start="118017" stop="118124"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267745" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116669" stop="116701"/>
              <exon start="117422" stop="117612"/>
              <exon start="118017" stop="118124"/>
              <exon start="118215" stop="118401"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265302" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAGACTTATGTTATATGCCCAACTTTTAACTCCTCAACACTCGCCTGCGGTTTAACCCATCGCTTCGACCTCTCTGCGACTGATCGCTGTTTCTCTCAACTTCGACTCCACTTTTGCCGGCGGCCTTATCGGCGAGATCTTTAATCAG : GAAGCGGTCCTTTGTGACCATGGGCACCGAATATCCCAATCGGCCAACCTTTCCCTCAAGGCCTGCTGCTACACCTTTTGGTGTTCCGCAGAGTACAACTCCTTTTCAATCATCTCGTCCAGTGGTTGGATCTGATGCTTCTGCTTTTCGGCCTGCTCCTCCTACTTCTTCTCCGGCTATGCCACCTCCTTCCTCATCTGGACCCATGGTTGGACCAGGGATATCTTCTTTTAGACCGATGCCACCCGGGATGCCTAATGATGCAGGGAGGCCACCTCCAACATCAACACCTCCATATGGGCCGACAGTCTCTGGCCCTTTCCCACGTTTCCCCTCACCGCAGTTTCCTTCTACAGCTCAGGTACCACCTCCACGCACTTCGATGCCGGGGCAGCCGGTTGTAGCAGCCCCTGTTAGACCTGTTTCAGGGCCTTTCTCAACACCTCCTGGTGCCCATCATCCACAAATCCAACCTCCTACTGTTCCGATGGGATCGCCTCCTCAAGGTGCAAGTACAGTGCAGCCTAGTCCAAATGTTTATCAGGGTCCCATGCAGTCCCAGTTTTCTGCTGCCAGAGCAACCTCACAGCCATCTTCCCCTTTAGCAGGTTCAGCTTATCCTGCTGCTAGACCTGGCTTTCAATCTGGTTTTCCAGGATATATAAGTCAGCAACCTTCAGGGTTTGCACAAGCTCCCCCTAGACAATCAGTACCATTTCCTTCTCAGCCTGGCGGCTATGTTCCACCAGTGCCAGCAGCTTCTAGCCCCTATCTTTCTCAACAAGGAGGGTTTGCACCACCACCACCACCTCTAACATCTCAACGTCCAGGATCTATGCCTCCTACATCTGCTATGCAAGGTTTGGTGGAAGACTTCAGTTCCTTCTCAATTGGGTCTGTTCCAGGATCATTTGATTCCGGCCTTGACTCTAAGGTTCTACCAAGACCAATTGATGTTGATGTTGAGCGGAATGTTTTGTCTGAGATGTATCCCATGAACTGCAGTTCAAGATTTTTGAGGCTCACAACTAGTGGCATACCAAATTCTCAGTCTTTGGCTTCAAGGTGGCACTTATCTCTTGGAGCAGTTGTTTGTCCTCTCGCCGAGGCATCAGATGGG : GAAGAAGTTCCTGTGGTTAATTTTGCCCCAACTGGTATCATCCGCTGTAGAAGGTGTCGCACTTATGTAAATCCTTATGTGACATTCACCGACAGTGGAAGAAAGTGGAGATGTAATATATGTGCATTGCTTAATGAAG : TTCCTGGTGAATATTTCGCACATTTGGATGCCAGTGGCAGAAGAGTTGACTTGGATCAAAGGCCTGAACTTACCAAAGGTAGCGTGGAGTTTATTGCTCCAGCTGAGTACATGGTCCGGCCTCCGATGCCTCCCCTGTACTTTTTTCTCATTGATGTATCTTTGACTGCTGTGAGAAGTGGAATGCTTGAG : GTTTTAGCACAAACCATCAAGAACAGTTTGGACAGCTTGCCTGGATTTCCAAGAACACAGATCGGGTTTATAACATATGACAGTACAGTACACTTTTATAACATGAAG : TCATCCTTGACTCAACCTCAAATGATGGTCATGTCAGATCTTGAAGATGTATTTGTGCCATTGCCAGATGATCTTCTTGTCAACTTGTCAGAATCAAGAACTGTGGTAGATGCATTTCTAGACAGCCTTCCTTCAATGTTTCAGGATAATGCGAATGTGGAATCAGCTTTTGGTCCAGCTCTTAAAACAGCCTTCATGGTTATG : AACCAACTTGGCGGTAAATTGCTGATCTTTCAAAGCAGTCTTC</gDNA_template>
            <first_frame> K  R  L  M  L  Y  A  Q  L  L  T  P  Q  H  S  P  A  V  *  P  I  A  S  T  S  L  R  L  I  A  V  S  L  N  F  D  S  T  F  A  G  G  L  I  G  E  I  F  N  Q  :  E  A  V  L  C  D  H  G  H  R  I  S  Q  S  A  N  L  S  L  K  A  C  C  Y  T  F  W  C  S  A  E  Y  N  S  F  S  I  I  S  S  S  G  W  I  *  C  F  C  F  S  A  C  S  S  Y  F  F  S  G  Y  A  T  S  F  L  I  W  T  H  G  W  T  R  D  I  F  F  *  T  D  A  T  R  D  A  *  *  C  R  E  A  T  S  N  I  N  T  S  I  W  A  D  S  L  W  P  F  P  T  F  P  L  T  A  V  S  F  Y  S  S  G  T  T  S  T  H  F  D  A  G  A  A  G  C  S  S  P  C  *  T  C  F  R  A  F  L  N  T  S  W  C  P  S  S  T  N  P  T  S  Y  C  S  D  G  I  A  S  S  R  C  K  Y  S  A  A  *  S  K  C  L  S  G  S  H  A  V  P  V  F  C  C  Q  S  N  L  T  A  I  F  P  F  S  R  F  S  L  S  C  C  *  T  W  L  S  I  W  F  S  R  I  Y  K  S  A  T  F  R  V  C  T  S  S  P  *  T  I  S  T  I  S  F  S  A  W  R  L  C  S  T  S  A  S  S  F  *  P  L  S  F  S  T  R  R  V  C  T  T  T  T  T  S  N  I  S  T  S  R  I  Y  A  S  Y  I  C  Y  A  R  F  G  G  R  L  Q  F  L  L  N  W  V  C  S  R  I  I  *  F  R  P  *  L  *  G  S  T  K  T  N  *  C  *  C  *  A  E  C  F  V  *  D  V  S  H  E  L  Q  F  K  I  F  E  A  H  N  *  W  H  T  K  F  S  V  F  G  F  K  V  A  L  I  S  W  S  S  C  L  S  S  R  R  G  I  R  W   : G  R  S  S  C  G  *  F  C  P  N  W  Y  H  P  L  *  K  V  S  H  L  C  K  S  L  C  D  I  H  R  Q  W  K  K  V  E  M  *  Y  M  C  I  A  *  *  S :   S  W  *  I  F  R  T  F  G  C  Q  W  Q  K  S  *  L  G  S  K  A  *  T  Y  Q  R  *  R  G  V  Y  C  S  S  *  V  H  G  P  A  S  D  A  S  P  V  L  F  S  H  *  C  I  F  D  C  C  E  K  W  N  A  *   : G  F  S  T  N  H  Q  E  Q  F  G  Q  L  A  W  I  S  K  N  T  D  R  V  Y  N  I  *  Q  Y  S  T  L  L  *  H  E   : V  I  L  D  S  T  S  N  D  G  H  V  R  S  *  R  C  I  C  A  I  A  R  *  S  S  C  Q  L  V  R  I  K  N  C  G  R  C  I  S  R  Q  P  S  F  N  V  S  G  *  C  E  C  G  I  S  F  W  S  S  S  *  N  S  L  H  G  Y   : E  P  T  W  R  *  I  A  D  L  S  K  Q  S   </first_frame>
            <second_frame>  K  D  L  C  Y  M  P  N  F  *  L  L  N  T  R  L  R  F  N  P  S  L  R  P  L  C  D  *  S  L  F  L  S  T  S  T  P  L  L  P  A  A  L  S  A  R  S  L  I  R :   K  R  S  F  V  T  M  G  T  E  Y  P  N  R  P  T  F  P  S  R  P  A  A  T  P  F  G  V  P  Q  S  T  T  P  F  Q  S  S  R  P  V  V  G  S  D  A  S  A  F  R  P  A  P  P  T  S  S  P  A  M  P  P  P  S  S  S  G  P  M  V  G  P  G  I  S  S  F  R  P  M  P  P  G  M  P  N  D  A  G  R  P  P  P  T  S  T  P  P  Y  G  P  T  V  S  G  P  F  P  R  F  P  S  P  Q  F  P  S  T  A  Q  V  P  P  P  R  T  S  M  P  G  Q  P  V  V  A  A  P  V  R  P  V  S  G  P  F  S  T  P  P  G  A  H  H  P  Q  I  Q  P  P  T  V  P  M  G  S  P  P  Q  G  A  S  T  V  Q  P  S  P  N  V  Y  Q  G  P  M  Q  S  Q  F  S  A  A  R  A  T  S  Q  P  S  S  P  L  A  G  S  A  Y  P  A  A  R  P  G  F  Q  S  G  F  P  G  Y  I  S  Q  Q  P  S  G  F  A  Q  A  P  P  R  Q  S  V  P  F  P  S  Q  P  G  G  Y  V  P  P  V  P  A  A  S  S  P  Y  L  S  Q  Q  G  G  F  A  P  P  P  P  P  L  T  S  Q  R  P  G  S  M  P  P  T  S  A  M  Q  G  L  V  E  D  F  S  S  F  S  I  G  S  V  P  G  S  F  D  S  G  L  D  S  K  V  L  P  R  P  I  D  V  D  V  E  R  N  V  L  S  E  M  Y  P  M  N  C  S  S  R  F  L  R  L  T  T  S  G  I  P  N  S  Q  S  L  A  S  R  W  H  L  S  L  G  A  V  V  C  P  L  A  E  A  S  D  G  :  E  E  V  P  V  V  N  F  A  P  T  G  I  I  R  C  R  R  C  R  T  Y  V  N  P  Y  V  T  F  T  D  S  G  R  K  W  R  C  N  I  C  A  L  L  N  E   : V  P  G  E  Y  F  A  H  L  D  A  S  G  R  R  V  D  L  D  Q  R  P  E  L  T  K  G  S  V  E  F  I  A  P  A  E  Y  M  V  R  P  P  M  P  P  L  Y  F  F  L  I  D  V  S  L  T  A  V  R  S  G  M  L  E  :  V  L  A  Q  T  I  K  N  S  L  D  S  L  P  G  F  P  R  T  Q  I  G  F  I  T  Y  D  S  T  V  H  F  Y  N  M  K  :  S  S  L  T  Q  P  Q  M  M  V  M  S  D  L  E  D  V  F  V  P  L  P  D  D  L  L  V  N  L  S  E  S  R  T  V  V  D  A  F  L  D  S  L  P  S  M  F  Q  D  N  A  N  V  E  S  A  F  G  P  A  L  K  T  A  F  M  V  M  :  N  Q  L  G  G  K  L  L  I  F  Q  S  S  L  </second_frame>
            <third_frame>   K  T  Y  V  I  C  P  T  F  N  S  S  T  L  A  C  G  L  T  H  R  F  D  L  S  A  T  D  R  C  F  S  Q  L  R  L  H  F  C  R  R  P  Y  R  R  D  L  *  S   : G  S  G  P  L  *  P  W  A  P  N  I  P  I  G  Q  P  F  P  Q  G  L  L  L  H  L  L  V  F  R  R  V  Q  L  L  F  N  H  L  V  Q  W  L  D  L  M  L  L  L  F  G  L  L  L  L  L  L  L  R  L  C  H  L  L  P  H  L  D  P  W  L  D  Q  G  Y  L  L  L  D  R  C  H  P  G  C  L  M  M  Q  G  G  H  L  Q  H  Q  H  L  H  M  G  R  Q  S  L  A  L  S  H  V  S  P  H  R  S  F  L  L  Q  L  R  Y  H  L  H  A  L  R  C  R  G  S  R  L  *  Q  P  L  L  D  L  F  Q  G  L  S  Q  H  L  L  V  P  I  I  H  K  S  N  L  L  L  F  R  W  D  R  L  L  K  V  Q  V  Q  C  S  L  V  Q  M  F  I  R  V  P  C  S  P  S  F  L  L  P  E  Q  P  H  S  H  L  P  L  *  Q  V  Q  L  I  L  L  L  D  L  A  F  N  L  V  F  Q  D  I  *  V  S  N  L  Q  G  L  H  K  L  P  L  D  N  Q  Y  H  F  L  L  S  L  A  A  M  F  H  Q  C  Q  Q  L  L  A  P  I  F  L  N  K  E  G  L  H  H  H  H  H  L  *  H  L  N  V  Q  D  L  C  L  L  H  L  L  C  K  V  W  W  K  T  S  V  P  S  Q  L  G  L  F  Q  D  H  L  I  P  A  L  T  L  R  F  Y  Q  D  Q  L  M  L  M  L  S  G  M  F  C  L  R  C  I  P  *  T  A  V  Q  D  F  *  G  S  Q  L  V  A  Y  Q  I  L  S  L  W  L  Q  G  G  T  Y  L  L  E  Q  L  F  V  L  S  P  R  H  Q  M  G :   K  K  F  L  W  L  I  L  P  Q  L  V  S  S  A  V  E  G  V  A  L  M  *  I  L  M  *  H  S  P  T  V  E  E  S  G  D  V  I  Y  V  H  C  L  M  K  :  F  L  V  N  I  S  H  I  W  M  P  V  A  E  E  L  T  W  I  K  G  L  N  L  P  K  V  A  W  S  L  L  L  Q  L  S  T  W  S  G  L  R  C  L  P  C  T  F  F  S  L  M  Y  L  *  L  L  *  E  V  E  C  L  R :   F  *  H  K  P  S  R  T  V  W  T  A  C  L  D  F  Q  E  H  R  S  G  L  *  H  M  T  V  Q  Y  T  F  I  T  *  S :   H  P  *  L  N  L  K  *  W  S  C  Q  I  L  K  M  Y  L  C  H  C  Q  M  I  F  L  S  T  C  Q  N  Q  E  L  W  *  M  H  F  *  T  A  F  L  Q  C  F  R  I  M  R  M  W  N  Q  L  L  V  Q  L  L  K  Q  P  S  W  L  * :   T  N  L  A  V  N  C  *  S  F  K  A  V  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="114459" stop="114523"/>
                    <exon start="115339" stop="116458"/>
                    <exon start="116563" stop="116701"/>
                    <exon start="117422" stop="117612"/>
                    <exon start="118017" stop="118124"/>
                    <exon start="118215" stop="118418"/>
                    <exon start="118566" stop="118607"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1869</number_coding_nucleotides>
                  <number_encoded_amino_acids>623</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLFLSTSTPLLPAALSARSLIRKRSFVTMGTEYPNRPTFPSRPAATPFGVPQSTTPFQSSRPVVGSDASAFRPAPPTSSPAMPPPSSSGPMVGPGISSFRPMPPGMPNDAGRPPPTSTPPYGPTVSGPFPRFPSPQFPSTAQVPPPRTSMPGQPVVAAPVRPVSGPFSTPPGAHHPQIQPPTVPMGSPPQGASTVQPSPNVYQGPMQSQFSAARATSQPSSPLAGSAYPAARPGFQSGFPGYISQQPSGFAQAPPRQSVPFPSQPGGYVPPVPAASSPYLSQQGGFAPPPPPLTSQRPGSMPPTSAMQGLVEDFSSFSIGSVPGSFDSGLDSKVLPRPIDVDVERNVLSEMYPMNCSSRFLRLTTSGIPNSQSLASRWHLSLGAVVCPLAEASDGEEVPVVNFAPTGIIRCRRCRTYVNPYVTFTDSGRKWRCNICALLNEVPGEYFAHLDASGRRVDLDQRPELTKGSVEFIAPAEYMVRPPMPPLYFFLIDVSLTAVRSGMLEVLAQTIKNSLDSLPGFPRTQIGFITYDSTVHFYNMKSSLTQPQMMVMSDLEDVFVPLPDDLLVNLSESRTVVDAFLDSLPSMFQDNANVESAFGPALKTAFMVMNQLGGKLLIFQSSL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="24" PGL_strand="+" PGL_start="118744" PGL_stop="126677"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="118744" e_stop="118797"/>
            <exon e_start="119870" e_stop="120019"/>
            <exon e_start="120135" e_stop="120291"/>
            <exon e_start="120539" e_stop="120666"/>
            <exon e_start="120766" e_stop="121088"/>
            <exon e_start="121168" e_stop="121356"/>
            <exon e_start="125612" e_stop="125847"/>
            <exon e_start="126106" e_stop="126673"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.903" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.823" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.642" e_score="1.000"/>
          <exon-intron don_prob="0.923" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.541" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="118744" e_stop="118797" e_length="54"/>
          </exon>
          <intron i_serial="1" don_prob="0.903" acc_prob="0.997">
            <gDNA_intron_boundary i_start="118798" i_stop="119869" i_length="1072"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="119870" e_stop="120019" e_length="150"/>
          </exon>
          <intron i_serial="2" don_prob="0.960" acc_prob="0.977">
            <gDNA_intron_boundary i_start="120020" i_stop="120134" i_length="115"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="120135" e_stop="120291" e_length="157"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.823">
            <gDNA_intron_boundary i_start="120292" i_stop="120538" i_length="247"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="120539" e_stop="120666" e_length="128"/>
          </exon>
          <intron i_serial="4" don_prob="0.956" acc_prob="0.642">
            <gDNA_intron_boundary i_start="120667" i_stop="120765" i_length="99"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="120766" e_stop="121088" e_length="323"/>
          </exon>
          <intron i_serial="5" don_prob="0.923" acc_prob="0.992">
            <gDNA_intron_boundary i_start="121089" i_stop="121167" i_length="79"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="121168" e_stop="121356" e_length="189"/>
          </exon>
          <intron i_serial="6" don_prob="0.995" acc_prob="0.998">
            <gDNA_intron_boundary i_start="121357" i_stop="125611" i_length="4255"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="125612" e_stop="125847" e_length="236"/>
          </exon>
          <intron i_serial="7" don_prob="0.994" acc_prob="0.541">
            <gDNA_intron_boundary i_start="125848" i_stop="126105" i_length="258"/>
          </intron>
          <exon e_serial="8" e_score="0.998">
            <gDNA_exon_boundary e_start="126106" e_stop="126673" e_length="568"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="118744" stop="118797"/>
              <exon start="119870" stop="120019"/>
              <exon start="120135" stop="120291"/>
              <exon start="120539" stop="120666"/>
              <exon start="120766" stop="121088"/>
              <exon start="121168" stop="121174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538332" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="118744" stop="118797"/>
              <exon start="119870" stop="120019"/>
              <exon start="120135" stop="120291"/>
              <exon start="120539" stop="120666"/>
              <exon start="120766" stop="120956"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538339" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="118747" stop="118797"/>
              <exon start="119870" stop="120019"/>
              <exon start="120135" stop="120291"/>
              <exon start="120539" stop="120666"/>
              <exon start="120766" stop="120819"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269616" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120281" stop="120291"/>
              <exon start="120539" stop="120666"/>
              <exon start="120766" stop="121088"/>
              <exon start="121168" stop="121312"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275173" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120596" stop="120666"/>
              <exon start="120766" stop="121088"/>
              <exon start="121168" stop="121356"/>
              <exon start="125612" stop="125768"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319939" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120772" stop="121088"/>
              <exon start="121168" stop="121356"/>
              <exon start="125612" stop="125847"/>
              <exon start="126106" stop="126155"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260477" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120841" stop="121088"/>
              <exon start="121168" stop="121356"/>
              <exon start="125612" stop="125714"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274653" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121005" stop="121088"/>
              <exon start="121168" stop="121263"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274654" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121264" stop="121356"/>
              <exon start="125612" stop="125847"/>
              <exon start="126106" stop="126228"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256945" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125652" stop="125847"/>
              <exon start="126106" stop="126665"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545874" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125769" stop="125847"/>
              <exon start="126106" stop="126641"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538336" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126148" stop="126673"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286577" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGCAGTCAATGTATATGCTTTCAGTGACAAATATACTGACATAGCTACTATAG : GTACGCTGGCAAAGTACACAGGTGGTCAGGTGTACTACTATCCAAGTTTTCAAGCGTCCGTTCACAAAGATAGATTGCGTCACGAGTTAACCCGAGATCTTACAAGGGAGACTGCTTGGGAGTCTGTCATGCGCATAAGATGTGGAAAAG : GTGTTCGTTTTACAACATATCATGGGAACTTCATGCTGAGATCCACTGATCTGATAGCACTTCCTGCTGTTGACTGTGATAAAGCATATGCAATGCAGTTATCCCTTGAAGAAACACTACTCACTTCCCAGACAGTATTTTTCCAAATTGCTCTACT : ATACACATCATCTTCTGGAGAAAGGCGCATTAGAGTACACACAGCAGCAGCACCGGTTGTTTCAGATTTAGGAGAAATGTATCGCCTAGCTGATACTGGTGCTATCATTTCTCTTTTTACCAGGCTTG : CCATTGAGAAAACTCTGACCTCTAAATTAGAGGAGGCTCGAAATTCTATTCAACTCAGGATTGTGAAAGCTCTTAGAGAATATCGAAATCTCCATGCTGTTCAGCACCGTGTGGCTGGAAGGATGATTTATCCAGAATCTTTAAAGTACTTGCCATTATATGGATTAGCTTTATGCAAAACAACTGCCCTTCGCGGTGGATATGCTGATGCTCAGCTTGACGAACGATGTGCTGCTGGATATACCATGATGGCTTTGCCCGTTAAAAGATTGTTGAAGCTTCTATATCCTAAGTTGATCCGTATAGATGAATATCTTCTAAAA : AAACCATCTTCGCGAGAGGAGTCTAAAGACATCTTGAAAGGGGTTCCACTTACAACAGAGAGCTTAGATCCCCAGGGTCTCTATCTCTTTGATGATGGTTTCCGGTTTGTCATCTGGTTCGGTAGAATGCTTTCTCCTAATATGATCCAGAGTTTGCTCGGAGAAAACTTTGCTGCTGACTTCTCTAAG : GTTTCACTTCAAGAGCTAGATAATGAAATGTCAAGAGAACTGATGGGTTTGCTTAAAAGACAGAGGGAGAGTGACAGATCATATTATCAGTTATGCCATCTTGTGAGGCAAGGTGAACAGCCTAGAGAAGGCTTCTTCTTGCTTGCAAATCTGATTGAGGATCCAGTTGGTGGTTCTATTGGTTACCAGGATTGGATTCTGCAAGTACACCGACAAGTCCAGCAAAATGCATAAAG : GGTTCCTGTATGTTCAATCATTTGTGGTCTTCTACTGTGTGGCGGTTCCTGAAGAAGTTGGAACTTGTTGCCACTTGCAACTATGGATGGTTCATCCAATGAGCAAAAGCTTCCATGGAAGAAATCTGCTGTTAGTGTTAATTGACACCATTGATTGCTGAGCTTACCTGATTTTCCTTGTAACATTAGTTGAAGAACTAATATTTCTCCTCATGTTGGGATCATTTCATACACCTGGACCAGCCATGCATTATGATGTGGGAGCAGGAAGATTGTGATCGTCCTTAAATGCTAGCATTACCCCGCTGCCCCATTTGCTTGGGGTGAACATGAAAAAAATGCTAATTGACTAGTATTTATTTTCACGTGTTGGTCTGGTTAGAGTGAGATGAGACATTAAATAGAACAATGTTGCAGTTATTTATATTCTTGATGTTGTGGGGATAGGGTATGCGTTTGAGTGGGATTTATTTAGACTTTTTGTAGAGATCTTGTACATGCATTTGCTTTGCATAACTGAATTTTTTTTGCTGCCCGTAATAAATTTTTGTTGAGCTGAAATGTAGTG</gDNA_template>
            <first_frame> *  Q  S  M  Y  M  L  S  V  T  N  I  L  T  *  L  L  *  :  V  R  W  Q  S  T  Q  V  V  R  C  T  T  I  Q  V  F  K  R  P  F  T  K  I  D  C  V  T  S  *  P  E  I  L  Q  G  R  L  L  G  S  L  S  C  A  *  D  V  E  K  :  V  F  V  L  Q  H  I  M  G  T  S  C  *  D  P  L  I  *  *  H  F  L  L  L  T  V  I  K  H  M  Q  C  S  Y  P  L  K  K  H  Y  S  L  P  R  Q  Y  F  S  K  L  L  Y   : Y  T  H  H  L  L  E  K  G  A  L  E  Y  T  Q  Q  Q  H  R  L  F  Q  I  *  E  K  C  I  A  *  L  I  L  V  L  S  F  L  F  L  P  G  L  :  P  L  R  K  L  *  P  L  N  *  R  R  L  E  I  L  F  N  S  G  L  *  K  L  L  E  N  I  E  I  S  M  L  F  S  T  V  W  L  E  G  *  F  I  Q  N  L  *  S  T  C  H  Y  M  D  *  L  Y  A  K  Q  L  P  F  A  V  D  M  L  M  L  S  L  T  N  D  V  L  L  D  I  P  *  W  L  C  P  L  K  D  C  *  S  F  Y  I  L  S  *  S  V  *  M  N  I  F  *  K :   N  H  L  R  E  R  S  L  K  T  S  *  K  G  F  H  L  Q  Q  R  A  *  I  P  R  V  S  I  S  L  M  M  V  S  G  L  S  S  G  S  V  E  C  F  L  L  I  *  S  R  V  C  S  E  K  T  L  L  L  T  S  L  R :   F  H  F  K  S  *  I  M  K  C  Q  E  N  *  W  V  C  L  K  D  R  G  R  V  T  D  H  I  I  S  Y  A  I  L  *  G  K  V  N  S  L  E  K  A  S  S  C  L  Q  I  *  L  R  I  Q  L  V  V  L  L  V  T  R  I  G  F  C  K  Y  T  D  K  S  S  K  M  H  K   : G  F  L  Y  V  Q  S  F  V  V  F  Y  C  V  A  V  P  E  E  V  G  T  C  C  H  L  Q  L  W  M  V  H  P  M  S  K  S  F  H  G  R  N  L  L  L  V  L  I  D  T  I  D  C  *  A  Y  L  I  F  L  V  T  L  V  E  E  L  I  F  L  L  M  L  G  S  F  H  T  P  G  P  A  M  H  Y  D  V  G  A  G  R  L  *  S  S  L  N  A  S  I  T  P  L  P  H  L  L  G  V  N  M  K  K  M  L  I  D  *  Y  L  F  S  R  V  G  L  V  R  V  R  *  D  I  K  *  N  N  V  A  V  I  Y  I  L  D  V  V  G  I  G  Y  A  F  E  W  D  L  F  R  L  F  V  E  I  L  Y  M  H  L  L  C  I  T  E  F  F  L  L  P  V  I  N  F  C  *  A  E  M  *   </first_frame>
            <second_frame>  S  S  Q  C  I  C  F  Q  *  Q  I  Y  *  H  S  Y  Y  R :   Y  A  G  K  V  H  R  W  S  G  V  L  L  S  K  F  S  S  V  R  S  Q  R  *  I  A  S  R  V  N  P  R  S  Y  K  G  D  C  L  G  V  C  H  A  H  K  M  W  K  R :   C  S  F  Y  N  I  S  W  E  L  H  A  E  I  H  *  S  D  S  T  S  C  C  *  L  *  *  S  I  C  N  A  V  I  P  *  R  N  T  T  H  F  P  D  S  I  F  P  N  C  S  T  :  I  H  I  I  F  W  R  K  A  H  *  S  T  H  S  S  S  T  G  C  F  R  F  R  R  N  V  S  P  S  *  Y  W  C  Y  H  F  S  F  Y  Q  A  C :   H  *  E  N  S  D  L  *  I  R  G  G  S  K  F  Y  S  T  Q  D  C  E  S  S  *  R  I  S  K  S  P  C  C  S  A  P  C  G  W  K  D  D  L  S  R  I  F  K  V  L  A  I  I  W  I  S  F  M  Q  N  N  C  P  S  R  W  I  C  *  C  S  A  *  R  T  M  C  C  W  I  Y  H  D  G  F  A  R  *  K  I  V  E  A  S  I  S  *  V  D  P  Y  R  *  I  S  S  K   : K  T  I  F  A  R  G  V  *  R  H  L  E  R  G  S  T  Y  N  R  E  L  R  S  P  G  S  L  S  L  *  *  W  F  P  V  C  H  L  V  R  *  N  A  F  S  *  Y  D  P  E  F  A  R  R  K  L  C  C  *  L  L  *   : G  F  T  S  R  A  R  *  *  N  V  K  R  T  D  G  F  A  *  K  T  E  G  E  *  Q  I  I  L  S  V  M  P  S  C  E  A  R  *  T  A  *  R  R  L  L  L  A  C  K  S  D  *  G  S  S  W  W  F  Y  W  L  P  G  L  D  S  A  S  T  P  T  S  P  A  K  C  I  K  :  G  S  C  M  F  N  H  L  W  S  S  T  V  W  R  F  L  K  K  L  E  L  V  A  T  C  N  Y  G  W  F  I  Q  *  A  K  A  S  M  E  E  I  C  C  *  C  *  L  T  P  L  I  A  E  L  T  *  F  S  L  *  H  *  L  K  N  *  Y  F  S  S  C  W  D  H  F  I  H  L  D  Q  P  C  I  M  M  W  E  Q  E  D  C  D  R  P  *  M  L  A  L  P  R  C  P  I  C  L  G  *  T  *  K  K  C  *  L  T  S  I  Y  F  H  V  L  V  W  L  E  *  D  E  T  L  N  R  T  M  L  Q  L  F  I  F  L  M  L  W  G  *  G  M  R  L  S  G  I  Y  L  D  F  L  *  R  S  C  T  C  I  C  F  A  *  L  N  F  F  C  C  P  *  *  I  F  V  E  L  K  C  S  </second_frame>
            <third_frame>   A  V  N  V  Y  A  F  S  D  K  Y  T  D  I  A  T  I   : G  T  L  A  K  Y  T  G  G  Q  V  Y  Y  Y  P  S  F  Q  A  S  V  H  K  D  R  L  R  H  E  L  T  R  D  L  T  R  E  T  A  W  E  S  V  M  R  I  R  C  G  K   : G  V  R  F  T  T  Y  H  G  N  F  M  L  R  S  T  D  L  I  A  L  P  A  V  D  C  D  K  A  Y  A  M  Q  L  S  L  E  E  T  L  L  T  S  Q  T  V  F  F  Q  I  A  L  L :   Y  T  S  S  S  G  E  R  R  I  R  V  H  T  A  A  A  P  V  V  S  D  L  G  E  M  Y  R  L  A  D  T  G  A  I  I  S  L  F  T  R  L   : A  I  E  K  T  L  T  S  K  L  E  E  A  R  N  S  I  Q  L  R  I  V  K  A  L  R  E  Y  R  N  L  H  A  V  Q  H  R  V  A  G  R  M  I  Y  P  E  S  L  K  Y  L  P  L  Y  G  L  A  L  C  K  T  T  A  L  R  G  G  Y  A  D  A  Q  L  D  E  R  C  A  A  G  Y  T  M  M  A  L  P  V  K  R  L  L  K  L  L  Y  P  K  L  I  R  I  D  E  Y  L  L  K  :  K  P  S  S  R  E  E  S  K  D  I  L  K  G  V  P  L  T  T  E  S  L  D  P  Q  G  L  Y  L  F  D  D  G  F  R  F  V  I  W  F  G  R  M  L  S  P  N  M  I  Q  S  L  L  G  E  N  F  A  A  D  F  S  K  :  V  S  L  Q  E  L  D  N  E  M  S  R  E  L  M  G  L  L  K  R  Q  R  E  S  D  R  S  Y  Y  Q  L  C  H  L  V  R  Q  G  E  Q  P  R  E  G  F  F  L  L  A  N  L  I  E  D  P  V  G  G  S  I  G  Y  Q  D  W  I  L  Q  V  H  R  Q  V  Q  Q  N  A  *  R :   V  P  V  C  S  I  I  C  G  L  L  L  C  G  G  S  *  R  S  W  N  L  L  P  L  A  T  M  D  G  S  S  N  E  Q  K  L  P  W  K  K  S  A  V  S  V  N  *  H  H  *  L  L  S  L  P  D  F  P  C  N  I  S  *  R  T  N  I  S  P  H  V  G  I  I  S  Y  T  W  T  S  H  A  L  *  C  G  S  R  K  I  V  I  V  L  K  C  *  H  Y  P  A  A  P  F  A  W  G  E  H  E  K  N  A  N  *  L  V  F  I  F  T  C  W  S  G  *  S  E  M  R  H  *  I  E  Q  C  C  S  Y  L  Y  S  *  C  C  G  D  R  V  C  V  *  V  G  F  I  *  T  F  C  R  D  L  V  H  A  F  A  L  H  N  *  I  F  F  A  A  R  N  K  F  L  L  S  *  N  V  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="118746" stop="118797"/>
                    <exon start="119870" stop="120019"/>
                    <exon start="120135" stop="120291"/>
                    <exon start="120539" stop="120666"/>
                    <exon start="120766" stop="121088"/>
                    <exon start="121168" stop="121356"/>
                    <exon start="125612" stop="125845"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1230</number_coding_nucleotides>
                  <number_encoded_amino_acids>410</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AVNVYAFSDKYTDIATIGTLAKYTGGQVYYYPSFQASVHKDRLRHELTRDLTRETAWESVMRIRCGKGVRFTTYHGNFMLRSTDLIALPAVDCDKAYAMQLSLEETLLTSQTVFFQIALLYTSSSGERRIRVHTAAAPVVSDLGEMYRLADTGAIISLFTRLAIEKTLTSKLEEARNSIQLRIVKALREYRNLHAVQHRVAGRMIYPESLKYLPLYGLALCKTTALRGGYADAQLDERCAAGYTMMALPVKRLLKLLYPKLIRIDEYLLKKPSSREESKDILKGVPLTTESLDPQGLYLFDDGFRFVIWFGRMLSPNMIQSLLGENFAADFSKVSLQELDNEMSRELMGLLKRQRESDRSYYQLCHLVRQGEQPREGFFLLANLIEDPVGGSIGYQDWILQVHRQVQQNA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="118744" e_stop="118797"/>
            <exon e_start="119870" e_stop="120019"/>
            <exon e_start="120135" e_stop="120291"/>
            <exon e_start="120539" e_stop="120666"/>
            <exon e_start="120766" e_stop="121088"/>
            <exon e_start="121168" e_stop="121356"/>
            <exon e_start="125612" e_stop="125847"/>
            <exon e_start="126103" e_stop="126677"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.903" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.823" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.642" e_score="1.000"/>
          <exon-intron don_prob="0.923" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="118744" e_stop="118797" e_length="54"/>
          </exon>
          <intron i_serial="1" don_prob="0.903" acc_prob="0.997">
            <gDNA_intron_boundary i_start="118798" i_stop="119869" i_length="1072"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="119870" e_stop="120019" e_length="150"/>
          </exon>
          <intron i_serial="2" don_prob="0.960" acc_prob="0.977">
            <gDNA_intron_boundary i_start="120020" i_stop="120134" i_length="115"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="120135" e_stop="120291" e_length="157"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.823">
            <gDNA_intron_boundary i_start="120292" i_stop="120538" i_length="247"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="120539" e_stop="120666" e_length="128"/>
          </exon>
          <intron i_serial="4" don_prob="0.956" acc_prob="0.642">
            <gDNA_intron_boundary i_start="120667" i_stop="120765" i_length="99"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="120766" e_stop="121088" e_length="323"/>
          </exon>
          <intron i_serial="5" don_prob="0.923" acc_prob="0.992">
            <gDNA_intron_boundary i_start="121089" i_stop="121167" i_length="79"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="121168" e_stop="121356" e_length="189"/>
          </exon>
          <intron i_serial="6" don_prob="0.995" acc_prob="0.998">
            <gDNA_intron_boundary i_start="121357" i_stop="125611" i_length="4255"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="125612" e_stop="125847" e_length="236"/>
          </exon>
          <intron i_serial="7" don_prob="0.994" acc_prob="0.000">
            <gDNA_intron_boundary i_start="125848" i_stop="126102" i_length="255"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="126103" e_stop="126677" e_length="575"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="118744" stop="118797"/>
              <exon start="119870" stop="120019"/>
              <exon start="120135" stop="120291"/>
              <exon start="120539" stop="120666"/>
              <exon start="120766" stop="121088"/>
              <exon start="121168" stop="121174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538332" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="118744" stop="118797"/>
              <exon start="119870" stop="120019"/>
              <exon start="120135" stop="120291"/>
              <exon start="120539" stop="120666"/>
              <exon start="120766" stop="120956"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538339" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="118747" stop="118797"/>
              <exon start="119870" stop="120019"/>
              <exon start="120135" stop="120291"/>
              <exon start="120539" stop="120666"/>
              <exon start="120766" stop="120819"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269616" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120281" stop="120291"/>
              <exon start="120539" stop="120666"/>
              <exon start="120766" stop="121088"/>
              <exon start="121168" stop="121312"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275173" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120596" stop="120666"/>
              <exon start="120766" stop="121088"/>
              <exon start="121168" stop="121356"/>
              <exon start="125612" stop="125768"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319939" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120841" stop="121088"/>
              <exon start="121168" stop="121356"/>
              <exon start="125612" stop="125714"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274653" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121005" stop="121088"/>
              <exon start="121168" stop="121263"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274654" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121193" stop="121356"/>
              <exon start="125612" stop="125847"/>
              <exon start="126103" stop="126677"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708485" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125625" stop="125847"/>
              <exon start="126103" stop="126665"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547987" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126148" stop="126673"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286577" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGCAGTCAATGTATATGCTTTCAGTGACAAATATACTGACATAGCTACTATAG : GTACGCTGGCAAAGTACACAGGTGGTCAGGTGTACTACTATCCAAGTTTTCAAGCGTCCGTTCACAAAGATAGATTGCGTCACGAGTTAACCCGAGATCTTACAAGGGAGACTGCTTGGGAGTCTGTCATGCGCATAAGATGTGGAAAAG : GTGTTCGTTTTACAACATATCATGGGAACTTCATGCTGAGATCCACTGATCTGATAGCACTTCCTGCTGTTGACTGTGATAAAGCATATGCAATGCAGTTATCCCTTGAAGAAACACTACTCACTTCCCAGACAGTATTTTTCCAAATTGCTCTACT : ATACACATCATCTTCTGGAGAAAGGCGCATTAGAGTACACACAGCAGCAGCACCGGTTGTTTCAGATTTAGGAGAAATGTATCGCCTAGCTGATACTGGTGCTATCATTTCTCTTTTTACCAGGCTTG : CCATTGAGAAAACTCTGACCTCTAAATTAGAGGAGGCTCGAAATTCTATTCAACTCAGGATTGTGAAAGCTCTTAGAGAATATCGAAATCTCCATGCTGTTCAGCACCGTGTGGCTGGAAGGATGATTTATCCAGAATCTTTAAAGTACTTGCCATTATATGGATTAGCTTTATGCAAAACAACTGCCCTTCGCGGTGGATATGCTGATGCTCAGCTTGACGAACGATGTGCTGCTGGATATACCATGATGGCTTTGCCCGTTAAAAGATTGTTGAAGCTTCTATATCCTAAGTTGATCCGTATAGATGAATATCTTCTAAAA : AAACCATCTTCGCGAGAGGAGTCTAAAGACATCTTGAAAGGGGTTCCACTTACAACAGAGAGCTTAGATCCCCAGGGTCTCTATCTCTTTGATGATGGTTTCCGGTTTGTCATCTGGTTCGGTAGAATGCTTTCTCCTAATATGATCCAGAGTTTGCTCGGAGAAAACTTTGCTGCTGACTTCTCTAAG : GTTTCACTTCAAGAGCTAGATAATGAAATGTCAAGAGAACTGATGGGTTTGCTTAAAAGACAGAGGGAGAGTGACAGATCATATTATCAGTTATGCCATCTTGTGAGGCAAGGTGAACAGCCTAGAGAAGGCTTCTTCTTGCTTGCAAATCTGATTGAGGATCCAGTTGGTGGTTCTATTGGTTACCAGGATTGGATTCTGCAAGTACACCGACAAGTCCAGCAAAATGCATAAAG : CAGGGTTCCTGTATGTTCAATCATTTGTGGTCTTCTACTGTGTGGCGGTTCCTGAAGAAGTTGGAACTTGTTGCCACTTGCAACTATGGATGGTTCATCCAATGAGCAAAAGCTTCCATGGAAGAAATCTGCTGTTAGTGTTAATTGACACCATTGATTGCTGAGCTTACCTGATTTTCCTTGTAACATTAGTTGAAGAACTAATATTTCTCCTCATGTTGGGATCATTTCATACACCTGGACCAGCCATGCATTATGATGTGGGAGCAGGAAGATTGTGATCGTCCTTAAATGCTAGCATTACCCCGCTGCCCCATTTGCTTGGGGTGAACATGAAAAAAATGCTAATTGACTAGTATTTATTTTCACGTGTTGGTCTGGTTAGAGTGAGATGAGACATTAAATAGAACAATGTTGCAGTTATTTATATTCTTGATGTTGTGGGGATAGGGTATGCGTTTGAGTGGGATTTATTTAGACTTTTTGTAGAGATCTTGTACATGCATTTGCTTTGCATAACTGAATTTTTTTTGCTGCCCGTAATAAATTTTTGTTGAGCTGAAATGTAGTGCAGA</gDNA_template>
            <first_frame> *  Q  S  M  Y  M  L  S  V  T  N  I  L  T  *  L  L  *  :  V  R  W  Q  S  T  Q  V  V  R  C  T  T  I  Q  V  F  K  R  P  F  T  K  I  D  C  V  T  S  *  P  E  I  L  Q  G  R  L  L  G  S  L  S  C  A  *  D  V  E  K  :  V  F  V  L  Q  H  I  M  G  T  S  C  *  D  P  L  I  *  *  H  F  L  L  L  T  V  I  K  H  M  Q  C  S  Y  P  L  K  K  H  Y  S  L  P  R  Q  Y  F  S  K  L  L  Y   : Y  T  H  H  L  L  E  K  G  A  L  E  Y  T  Q  Q  Q  H  R  L  F  Q  I  *  E  K  C  I  A  *  L  I  L  V  L  S  F  L  F  L  P  G  L  :  P  L  R  K  L  *  P  L  N  *  R  R  L  E  I  L  F  N  S  G  L  *  K  L  L  E  N  I  E  I  S  M  L  F  S  T  V  W  L  E  G  *  F  I  Q  N  L  *  S  T  C  H  Y  M  D  *  L  Y  A  K  Q  L  P  F  A  V  D  M  L  M  L  S  L  T  N  D  V  L  L  D  I  P  *  W  L  C  P  L  K  D  C  *  S  F  Y  I  L  S  *  S  V  *  M  N  I  F  *  K :   N  H  L  R  E  R  S  L  K  T  S  *  K  G  F  H  L  Q  Q  R  A  *  I  P  R  V  S  I  S  L  M  M  V  S  G  L  S  S  G  S  V  E  C  F  L  L  I  *  S  R  V  C  S  E  K  T  L  L  L  T  S  L  R :   F  H  F  K  S  *  I  M  K  C  Q  E  N  *  W  V  C  L  K  D  R  G  R  V  T  D  H  I  I  S  Y  A  I  L  *  G  K  V  N  S  L  E  K  A  S  S  C  L  Q  I  *  L  R  I  Q  L  V  V  L  L  V  T  R  I  G  F  C  K  Y  T  D  K  S  S  K  M  H  K   : A  G  F  L  Y  V  Q  S  F  V  V  F  Y  C  V  A  V  P  E  E  V  G  T  C  C  H  L  Q  L  W  M  V  H  P  M  S  K  S  F  H  G  R  N  L  L  L  V  L  I  D  T  I  D  C  *  A  Y  L  I  F  L  V  T  L  V  E  E  L  I  F  L  L  M  L  G  S  F  H  T  P  G  P  A  M  H  Y  D  V  G  A  G  R  L  *  S  S  L  N  A  S  I  T  P  L  P  H  L  L  G  V  N  M  K  K  M  L  I  D  *  Y  L  F  S  R  V  G  L  V  R  V  R  *  D  I  K  *  N  N  V  A  V  I  Y  I  L  D  V  V  G  I  G  Y  A  F  E  W  D  L  F  R  L  F  V  E  I  L  Y  M  H  L  L  C  I  T  E  F  F  L  L  P  V  I  N  F  C  *  A  E  M  *  C  R </first_frame>
            <second_frame>  S  S  Q  C  I  C  F  Q  *  Q  I  Y  *  H  S  Y  Y  R :   Y  A  G  K  V  H  R  W  S  G  V  L  L  S  K  F  S  S  V  R  S  Q  R  *  I  A  S  R  V  N  P  R  S  Y  K  G  D  C  L  G  V  C  H  A  H  K  M  W  K  R :   C  S  F  Y  N  I  S  W  E  L  H  A  E  I  H  *  S  D  S  T  S  C  C  *  L  *  *  S  I  C  N  A  V  I  P  *  R  N  T  T  H  F  P  D  S  I  F  P  N  C  S  T  :  I  H  I  I  F  W  R  K  A  H  *  S  T  H  S  S  S  T  G  C  F  R  F  R  R  N  V  S  P  S  *  Y  W  C  Y  H  F  S  F  Y  Q  A  C :   H  *  E  N  S  D  L  *  I  R  G  G  S  K  F  Y  S  T  Q  D  C  E  S  S  *  R  I  S  K  S  P  C  C  S  A  P  C  G  W  K  D  D  L  S  R  I  F  K  V  L  A  I  I  W  I  S  F  M  Q  N  N  C  P  S  R  W  I  C  *  C  S  A  *  R  T  M  C  C  W  I  Y  H  D  G  F  A  R  *  K  I  V  E  A  S  I  S  *  V  D  P  Y  R  *  I  S  S  K   : K  T  I  F  A  R  G  V  *  R  H  L  E  R  G  S  T  Y  N  R  E  L  R  S  P  G  S  L  S  L  *  *  W  F  P  V  C  H  L  V  R  *  N  A  F  S  *  Y  D  P  E  F  A  R  R  K  L  C  C  *  L  L  *   : G  F  T  S  R  A  R  *  *  N  V  K  R  T  D  G  F  A  *  K  T  E  G  E  *  Q  I  I  L  S  V  M  P  S  C  E  A  R  *  T  A  *  R  R  L  L  L  A  C  K  S  D  *  G  S  S  W  W  F  Y  W  L  P  G  L  D  S  A  S  T  P  T  S  P  A  K  C  I  K  :  Q  G  S  C  M  F  N  H  L  W  S  S  T  V  W  R  F  L  K  K  L  E  L  V  A  T  C  N  Y  G  W  F  I  Q  *  A  K  A  S  M  E  E  I  C  C  *  C  *  L  T  P  L  I  A  E  L  T  *  F  S  L  *  H  *  L  K  N  *  Y  F  S  S  C  W  D  H  F  I  H  L  D  Q  P  C  I  M  M  W  E  Q  E  D  C  D  R  P  *  M  L  A  L  P  R  C  P  I  C  L  G  *  T  *  K  K  C  *  L  T  S  I  Y  F  H  V  L  V  W  L  E  *  D  E  T  L  N  R  T  M  L  Q  L  F  I  F  L  M  L  W  G  *  G  M  R  L  S  G  I  Y  L  D  F  L  *  R  S  C  T  C  I  C  F  A  *  L  N  F  F  C  C  P  *  *  I  F  V  E  L  K  C  S  A   </second_frame>
            <third_frame>   A  V  N  V  Y  A  F  S  D  K  Y  T  D  I  A  T  I   : G  T  L  A  K  Y  T  G  G  Q  V  Y  Y  Y  P  S  F  Q  A  S  V  H  K  D  R  L  R  H  E  L  T  R  D  L  T  R  E  T  A  W  E  S  V  M  R  I  R  C  G  K   : G  V  R  F  T  T  Y  H  G  N  F  M  L  R  S  T  D  L  I  A  L  P  A  V  D  C  D  K  A  Y  A  M  Q  L  S  L  E  E  T  L  L  T  S  Q  T  V  F  F  Q  I  A  L  L :   Y  T  S  S  S  G  E  R  R  I  R  V  H  T  A  A  A  P  V  V  S  D  L  G  E  M  Y  R  L  A  D  T  G  A  I  I  S  L  F  T  R  L   : A  I  E  K  T  L  T  S  K  L  E  E  A  R  N  S  I  Q  L  R  I  V  K  A  L  R  E  Y  R  N  L  H  A  V  Q  H  R  V  A  G  R  M  I  Y  P  E  S  L  K  Y  L  P  L  Y  G  L  A  L  C  K  T  T  A  L  R  G  G  Y  A  D  A  Q  L  D  E  R  C  A  A  G  Y  T  M  M  A  L  P  V  K  R  L  L  K  L  L  Y  P  K  L  I  R  I  D  E  Y  L  L  K  :  K  P  S  S  R  E  E  S  K  D  I  L  K  G  V  P  L  T  T  E  S  L  D  P  Q  G  L  Y  L  F  D  D  G  F  R  F  V  I  W  F  G  R  M  L  S  P  N  M  I  Q  S  L  L  G  E  N  F  A  A  D  F  S  K  :  V  S  L  Q  E  L  D  N  E  M  S  R  E  L  M  G  L  L  K  R  Q  R  E  S  D  R  S  Y  Y  Q  L  C  H  L  V  R  Q  G  E  Q  P  R  E  G  F  F  L  L  A  N  L  I  E  D  P  V  G  G  S  I  G  Y  Q  D  W  I  L  Q  V  H  R  Q  V  Q  Q  N  A  *  S :   R  V  P  V  C  S  I  I  C  G  L  L  L  C  G  G  S  *  R  S  W  N  L  L  P  L  A  T  M  D  G  S  S  N  E  Q  K  L  P  W  K  K  S  A  V  S  V  N  *  H  H  *  L  L  S  L  P  D  F  P  C  N  I  S  *  R  T  N  I  S  P  H  V  G  I  I  S  Y  T  W  T  S  H  A  L  *  C  G  S  R  K  I  V  I  V  L  K  C  *  H  Y  P  A  A  P  F  A  W  G  E  H  E  K  N  A  N  *  L  V  F  I  F  T  C  W  S  G  *  S  E  M  R  H  *  I  E  Q  C  C  S  Y  L  Y  S  *  C  C  G  D  R  V  C  V  *  V  G  F  I  *  T  F  C  R  D  L  V  H  A  F  A  L  H  N  *  I  F  F  A  A  R  N  K  F  L  L  S  *  N  V  V  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="118746" stop="118797"/>
                    <exon start="119870" stop="120019"/>
                    <exon start="120135" stop="120291"/>
                    <exon start="120539" stop="120666"/>
                    <exon start="120766" stop="121088"/>
                    <exon start="121168" stop="121356"/>
                    <exon start="125612" stop="125845"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1230</number_coding_nucleotides>
                  <number_encoded_amino_acids>410</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AVNVYAFSDKYTDIATIGTLAKYTGGQVYYYPSFQASVHKDRLRHELTRDLTRETAWESVMRIRCGKGVRFTTYHGNFMLRSTDLIALPAVDCDKAYAMQLSLEETLLTSQTVFFQIALLYTSSSGERRIRVHTAAAPVVSDLGEMYRLADTGAIISLFTRLAIEKTLTSKLEEARNSIQLRIVKALREYRNLHAVQHRVAGRMIYPESLKYLPLYGLALCKTTALRGGYADAQLDERCAAGYTMMALPVKRLLKLLYPKLIRIDEYLLKKPSSREESKDILKGVPLTTESLDPQGLYLFDDGFRFVIWFGRMLSPNMIQSLLGENFAADFSKVSLQELDNEMSRELMGLLKRQRESDRSYYQLCHLVRQGEQPREGFFLLANLIEDPVGGSIGYQDWILQVHRQVQQNA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="125611" e_stop="125847"/>
            <exon e_start="126106" e_stop="126673"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.541" e_score="0.996"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="125611" e_stop="125847" e_length="237"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.541">
            <gDNA_intron_boundary i_start="125848" i_stop="126105" i_length="258"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="126106" e_stop="126673" e_length="568"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125611" stop="125847"/>
              <exon start="126106" stop="126665"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538329" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125652" stop="125847"/>
              <exon start="126106" stop="126665"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545874" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125769" stop="125847"/>
              <exon start="126106" stop="126641"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538336" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126148" stop="126673"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286577" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGTTTCACTTCAAGAGCTAGATAATGAAATGTCAAGAGAACTGATGGGTTTGCTTAAAAGACAGAGGGAGAGTGACAGATCATATTATCAGTTATGCCATCTTGTGAGGCAAGGTGAACAGCCTAGAGAAGGCTTCTTCTTGCTTGCAAATCTGATTGAGGATCCAGTTGGTGGTTCTATTGGTTACCAGGATTGGATTCTGCAAGTACACCGACAAGTCCAGCAAAATGCATAAAG : GGTTCCTGTATGTTCAATCATTTGTGGTCTTCTACTGTGTGGCGGTTCCTGAAGAAGTTGGAACTTGTTGCCACTTGCAACTATGGATGGTTCATCCAATGAGCAAAAGCTTCCATGGAAGAAATCTGCTGTTAGTGTTAATTGACACCATTGATTGCTGAGCTTACCTGATTTTCCTTGTAACATTAGTTGAAGAACTAATATTTCTCCTCATGTTGGGATCATTTCATACACCTGGACCAGCCATGCATTATGATGTGGGAGCAGGAAGATTGTGATCGTCCTTAAATGCTAGCATTACCCCGCTGCCCCATTTGCTTGGGGTGAACATGAAAAAAATGCTAATTGACTAGTATTTATTTTCACGTGTTGGTCTGGTTAGAGTGAGATGAGACATTAAATAGAACAATGTTGCAGTTATTTATATTCTTGATGTTGTGGGGATAGGGTATGCGTTTGAGTGGGATTTATTTAGACTTTTTGTAGAGATCTTGTACATGCATTTGCTTTGCATAACTGAATTTTTTTTGCTGCCCGTAATAAATTTTTGTTGAGCTGAAATGTAGTG</gDNA_template>
            <first_frame> G  F  T  S  R  A  R  *  *  N  V  K  R  T  D  G  F  A  *  K  T  E  G  E  *  Q  I  I  L  S  V  M  P  S  C  E  A  R  *  T  A  *  R  R  L  L  L  A  C  K  S  D  *  G  S  S  W  W  F  Y  W  L  P  G  L  D  S  A  S  T  P  T  S  P  A  K  C  I  K  :  G  S  C  M  F  N  H  L  W  S  S  T  V  W  R  F  L  K  K  L  E  L  V  A  T  C  N  Y  G  W  F  I  Q  *  A  K  A  S  M  E  E  I  C  C  *  C  *  L  T  P  L  I  A  E  L  T  *  F  S  L  *  H  *  L  K  N  *  Y  F  S  S  C  W  D  H  F  I  H  L  D  Q  P  C  I  M  M  W  E  Q  E  D  C  D  R  P  *  M  L  A  L  P  R  C  P  I  C  L  G  *  T  *  K  K  C  *  L  T  S  I  Y  F  H  V  L  V  W  L  E  *  D  E  T  L  N  R  T  M  L  Q  L  F  I  F  L  M  L  W  G  *  G  M  R  L  S  G  I  Y  L  D  F  L  *  R  S  C  T  C  I  C  F  A  *  L  N  F  F  C  C  P  *  *  I  F  V  E  L  K  C  S  </first_frame>
            <second_frame>  V  S  L  Q  E  L  D  N  E  M  S  R  E  L  M  G  L  L  K  R  Q  R  E  S  D  R  S  Y  Y  Q  L  C  H  L  V  R  Q  G  E  Q  P  R  E  G  F  F  L  L  A  N  L  I  E  D  P  V  G  G  S  I  G  Y  Q  D  W  I  L  Q  V  H  R  Q  V  Q  Q  N  A  *  R :   V  P  V  C  S  I  I  C  G  L  L  L  C  G  G  S  *  R  S  W  N  L  L  P  L  A  T  M  D  G  S  S  N  E  Q  K  L  P  W  K  K  S  A  V  S  V  N  *  H  H  *  L  L  S  L  P  D  F  P  C  N  I  S  *  R  T  N  I  S  P  H  V  G  I  I  S  Y  T  W  T  S  H  A  L  *  C  G  S  R  K  I  V  I  V  L  K  C  *  H  Y  P  A  A  P  F  A  W  G  E  H  E  K  N  A  N  *  L  V  F  I  F  T  C  W  S  G  *  S  E  M  R  H  *  I  E  Q  C  C  S  Y  L  Y  S  *  C  C  G  D  R  V  C  V  *  V  G  F  I  *  T  F  C  R  D  L  V  H  A  F  A  L  H  N  *  I  F  F  A  A  R  N  K  F  L  L  S  *  N  V  V </second_frame>
            <third_frame>   F  H  F  K  S  *  I  M  K  C  Q  E  N  *  W  V  C  L  K  D  R  G  R  V  T  D  H  I  I  S  Y  A  I  L  *  G  K  V  N  S  L  E  K  A  S  S  C  L  Q  I  *  L  R  I  Q  L  V  V  L  L  V  T  R  I  G  F  C  K  Y  T  D  K  S  S  K  M  H  K   : G  F  L  Y  V  Q  S  F  V  V  F  Y  C  V  A  V  P  E  E  V  G  T  C  C  H  L  Q  L  W  M  V  H  P  M  S  K  S  F  H  G  R  N  L  L  L  V  L  I  D  T  I  D  C  *  A  Y  L  I  F  L  V  T  L  V  E  E  L  I  F  L  L  M  L  G  S  F  H  T  P  G  P  A  M  H  Y  D  V  G  A  G  R  L  *  S  S  L  N  A  S  I  T  P  L  P  H  L  L  G  V  N  M  K  K  M  L  I  D  *  Y  L  F  S  R  V  G  L  V  R  V  R  *  D  I  K  *  N  N  V  A  V  I  Y  I  L  D  V  V  G  I  G  Y  A  F  E  W  D  L  F  R  L  F  V  E  I  L  Y  M  H  L  L  C  I  T  E  F  F  L  L  P  V  I  N  F  C  *  A  E  M  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125766" stop="125847"/>
                    <exon start="126106" stop="126266"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LRIQLVVLLVTRIGFCKYTDKSSKMHKGFLYVQSFVVFYCVAVPEEVGTCCHLQLWMVHPMSKSFHGRNLLLVLIDTIDC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125612" stop="125845"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VSLQELDNEMSRELMGLLKRQRESDRSYYQLCHLVRQGEQPREGFFLLANLIEDPVGGSIGYQDWILQVHRQVQQNA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="25" PGL_strand="-" PGL_start="133626" PGL_stop="127773"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="133626" e_stop="133031"/>
            <exon e_start="132298" e_stop="131804"/>
            <exon e_start="129712" e_stop="129566"/>
            <exon e_start="128328" e_stop="128221"/>
            <exon e_start="128075" e_stop="127773"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="0.993"/>
          <exon-intron don_prob="0.991" acc_prob="0.966" e_score="1.000"/>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="133626" e_stop="133031" e_length="596"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.967">
            <gDNA_intron_boundary i_start="133030" i_stop="132299" i_length="732"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="132298" e_stop="131804" e_length="495"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.982">
            <gDNA_intron_boundary i_start="131803" i_stop="129713" i_length="2091"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="129712" e_stop="129566" e_length="147"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="129565" i_stop="128329" i_length="1237"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="128328" e_stop="128221" e_length="108"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.966">
            <gDNA_intron_boundary i_start="128220" i_stop="128076" i_length="145"/>
          </intron>
          <exon e_serial="5" e_score="0.980">
            <gDNA_exon_boundary e_start="128075" e_stop="127773" e_length="303"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133626" stop="133060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306357" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133618" stop="133097"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367622" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133592" stop="133046"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302367" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133494" stop="133082"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133314" stop="133031"/>
              <exon start="132298" stop="131984"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252457" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133188" stop="133031"/>
              <exon start="132298" stop="132139"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397302" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133187" stop="133031"/>
              <exon start="132298" stop="131928"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297507" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133171" stop="133031"/>
              <exon start="132298" stop="131804"/>
              <exon start="129712" stop="129694"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396603" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133169" stop="133031"/>
              <exon start="132298" stop="131993"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206436" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131981" stop="131804"/>
              <exon start="129712" stop="129566"/>
              <exon start="128328" stop="128221"/>
              <exon start="128075" stop="127773"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E696662" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="25" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAATTAGAGAAAATTAACGAAAATCGCGCATCCAGTTGAAATGTTATCAGAATCAGAACCACCGGCTGCAGCCGCCAGTTTACCATCAGCAACCCCTCCGCCGCCGTCGTCCGATGAGGACTTCTTCTCGTCTGTATCAGTGGCATCGACGTCTTCCACGTCATCGCCATCCACCCCGATTCCTTCACCACCACAGCTTCATCCAGAGATCCCAATTTCATGGCCTGAAGACGGGACCTTAACCCTAGCTTGGGTTACCAACTTGATGCTAGCATTTGATTGGTCATCCAAGAATCTTGCTCCGACGGAGCTGCCATCGGTGTTGCCGGTAGTGGTGTTTGATCGGCTTATACTAACGGCTTCCAAGATCTTGCATAAAGAACCCAATTGTGTGCATATTGATAGCGGGTCGGGGTTGGGAAATGATTCGAGGGTTGTTGTGGTTGGGGACGTGCACGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTCAATGGAGACTATGTCGATAGAGGCGCTTGGGGTCTTGAGACCTTTCTTACCTTGTTGGCTTGGAAG : GTTTTTATGCCCAATAGGGTGTTTCTCCTTCGTGGAAATCACGAGTCGAAGTACTGTACTTCTGTTTATGGTTTTGAAAAGGAGGTTCTAGCGAAGTATGCGGATAGTGGGAAACATGTATACAGGAAATGTTTAGGATGCTTCGAAGGACTTCCTCTTGCATCCATTATTGGGGATCATGTCTACACAGCTCATGGAGGTATTTTCCGCAGTATTGCTGTCACTCCAGCTAAAAGAGCTAAAGGGAAGAAGAACCGTAAAATAGTTTCAAACCCTGATGTTACTACTTTATCTCTTGGTTCTATGGAGGAATTATTAAAAGCTAGGAGATCTGTCCTTGATCCTCCTTGGGAAGGTACGAATCTGATACCGGGTGATGTCTTGTGGTCAGACCCGTCAATGAAACCTGGACTTTCCCCAAATAAAGAAAGAGGAATTGGTCTCTTATGGGGTCCGGATTGCACCGAAGATTTCTTGAAGATGTTGAATTTAAAG : TTGATTATTAGGTCACATGAAGGTCCAGATGCAAGGGAAAAGAGAGAGGGAATGGAAGGAATGGATCAAGGGTACACCATAGATCATGAGGTCCAGTCCGGTAAATTGATTACAGTGTTTAGTGCCCCAGACTATCCACAGTTTCAG : GCAACTAAGGATAGGTACCGAAATAAAGGAGCATATATTATTTTGGAACCTCCTAATTTTGACATCCCCGTTTATCGTAGTTTTGAAGCAGTGATGCCCCGACCCAAG : GTGAATCCATATTATGATTTTGAAGATTGCATTGATTCTGATGAAGAATTAGACTTGGCGTCTATGGCTACATGAAGGTAGTTCTCATGATCAGCGCGACATTTGCAAAGCTTAAAATATTGTACATGCTTCTATATTATTTTTGAGGTGATATTAGTAAAATTATTCCTTCAAGATTTCTTGACTGTTAGAGAGATACGTATCATGGTTTTCTACTCAGAACAGTTGCTGATGTACAACCTTTTTTTGTATCAAATTTAGACAGACTGTTTCTTGTACAACTTAATATCTTAAATGCTGCTT</gDNA_template>
            <first_frame> K  I  R  E  N  *  R  K  S  R  I  Q  L  K  C  Y  Q  N  Q  N  H  R  L  Q  P  P  V  Y  H  Q  Q  P  L  R  R  R  R  P  M  R  T  S  S  R  L  Y  Q  W  H  R  R  L  P  R  H  R  H  P  P  R  F  L  H  H  H  S  F  I  Q  R  S  Q  F  H  G  L  K  T  G  P  *  P  *  L  G  L  P  T  *  C  *  H  L  I  G  H  P  R  I  L  L  R  R  S  C  H  R  C  C  R  *  W  C  L  I  G  L  Y  *  R  L  P  R  S  C  I  K  N  P  I  V  C  I  L  I  A  G  R  G  W  E  M  I  R  G  L  L  W  L  G  T  C  T  A  S  Y  M  M  S  C  S  Y  *  E  M  R  V  F  P  L  T  I  G  S  L  C  S  M  E  T  M  S  I  E  A  L  G  V  L  R  P  F  L  P  C  W  L  G  R :   F  L  C  P  I  G  C  F  S  F  V  E  I  T  S  R  S  T  V  L  L  F  M  V  L  K  R  R  F  *  R  S  M  R  I  V  G  N  M  Y  T  G  N  V  *  D  A  S  K  D  F  L  L  H  P  L  L  G  I  M  S  T  Q  L  M  E  V  F  S  A  V  L  L  S  L  Q  L  K  E  L  K  G  R  R  T  V  K  *  F  Q  T  L  M  L  L  L  Y  L  L  V  L  W  R  N  Y  *  K  L  G  D  L  S  L  I  L  L  G  K  V  R  I  *  Y  R  V  M  S  C  G  Q  T  R  Q  *  N  L  D  F  P  Q  I  K  K  E  E  L  V  S  Y  G  V  R  I  A  P  K  I  S  *  R  C  *  I  *  S :   *  L  L  G  H  M  K  V  Q  M  Q  G  K  R  E  R  E  W  K  E  W  I  K  G  T  P  *  I  M  R  S  S  P  V  N  *  L  Q  C  L  V  P  Q  T  I  H  S  F  R :   Q  L  R  I  G  T  E  I  K  E  H  I  L  F  W  N  L  L  I  L  T  S  P  F  I  V  V  L  K  Q  *  C  P  D  P  R :   *  I  H  I  M  I  L  K  I  A  L  I  L  M  K  N  *  T  W  R  L  W  L  H  E  G  S  S  H  D  Q  R  D  I  C  K  A  *  N  I  V  H  A  S  I  L  F  L  R  *  Y  *  *  N  Y  S  F  K  I  S  *  L  L  E  R  Y  V  S  W  F  S  T  Q  N  S  C  *  C  T  T  F  F  C  I  K  F  R  Q  T  V  S  C  T  T  *  Y  L  K  C  C   </first_frame>
            <second_frame>  K  L  E  K  I  N  E  N  R  A  S  S  *  N  V  I  R  I  R  T  T  G  C  S  R  Q  F  T  I  S  N  P  S  A  A  V  V  R  *  G  L  L  L  V  C  I  S  G  I  D  V  F  H  V  I  A  I  H  P  D  S  F  T  T  T  A  S  S  R  D  P  N  F  M  A  *  R  R  D  L  N  P  S  L  G  Y  Q  L  D  A  S  I  *  L  V  I  Q  E  S  C  S  D  G  A  A  I  G  V  A  G  S  G  V  *  S  A  Y  T  N  G  F  Q  D  L  A  *  R  T  Q  L  C  A  Y  *  *  R  V  G  V  G  K  *  F  E  G  C  C  G  W  G  R  A  R  P  A  T  *  C  L  V  L  I  E  R  C  G  F  S  L  *  R  S  V  L  C  V  Q  W  R  L  C  R  *  R  R  L  G  S  *  D  L  S  Y  L  V  G  L  E   : G  F  Y  A  Q  *  G  V  S  P  S  W  K  S  R  V  E  V  L  Y  F  C  L  W  F  *  K  G  G  S  S  E  V  C  G  *  W  E  T  C  I  Q  E  M  F  R  M  L  R  R  T  S  S  C  I  H  Y  W  G  S  C  L  H  S  S  W  R  Y  F  P  Q  Y  C  C  H  S  S  *  K  S  *  R  E  E  E  P  *  N  S  F  K  P  *  C  Y  Y  F  I  S  W  F  Y  G  G  I  I  K  S  *  E  I  C  P  *  S  S  L  G  R  Y  E  S  D  T  G  *  C  L  V  V  R  P  V  N  E  T  W  T  F  P  K  *  R  K  R  N  W  S  L  M  G  S  G  L  H  R  R  F  L  E  D  V  E  F  K   : V  D  Y  *  V  T  *  R  S  R  C  K  G  K  E  R  G  N  G  R  N  G  S  R  V  H  H  R  S  *  G  P  V  R  *  I  D  Y  S  V  *  C  P  R  L  S  T  V  S   : G  N  *  G  *  V  P  K  *  R  S  I  Y  Y  F  G  T  S  *  F  *  H  P  R  L  S  *  F  *  S  S  D  A  P  T  Q   : G  E  S  I  L  *  F  *  R  L  H  *  F  *  *  R  I  R  L  G  V  Y  G  Y  M  K  V  V  L  M  I  S  A  T  F  A  K  L  K  I  L  Y  M  L  L  Y  Y  F  *  G  D  I  S  K  I  I  P  S  R  F  L  D  C  *  R  D  T  Y  H  G  F  L  L  R  T  V  A  D  V  Q  P  F  F  V  S  N  L  D  R  L  F  L  V  Q  L  N  I  L  N  A  A  </second_frame>
            <third_frame>   N  *  R  K  L  T  K  I  A  H  P  V  E  M  L  S  E  S  E  P  P  A  A  A  A  S  L  P  S  A  T  P  P  P  P  S  S  D  E  D  F  F  S  S  V  S  V  A  S  T  S  S  T  S  S  P  S  T  P  I  P  S  P  P  Q  L  H  P  E  I  P  I  S  W  P  E  D  G  T  L  T  L  A  W  V  T  N  L  M  L  A  F  D  W  S  S  K  N  L  A  P  T  E  L  P  S  V  L  P  V  V  V  F  D  R  L  I  L  T  A  S  K  I  L  H  K  E  P  N  C  V  H  I  D  S  G  S  G  L  G  N  D  S  R  V  V  V  V  G  D  V  H  G  Q  L  H  D  V  L  F  L  L  R  D  A  G  F  P  S  D  D  R  F  F  V  F  N  G  D  Y  V  D  R  G  A  W  G  L  E  T  F  L  T  L  L  A  W  K  :  V  F  M  P  N  R  V  F  L  L  R  G  N  H  E  S  K  Y  C  T  S  V  Y  G  F  E  K  E  V  L  A  K  Y  A  D  S  G  K  H  V  Y  R  K  C  L  G  C  F  E  G  L  P  L  A  S  I  I  G  D  H  V  Y  T  A  H  G  G  I  F  R  S  I  A  V  T  P  A  K  R  A  K  G  K  K  N  R  K  I  V  S  N  P  D  V  T  T  L  S  L  G  S  M  E  E  L  L  K  A  R  R  S  V  L  D  P  P  W  E  G  T  N  L  I  P  G  D  V  L  W  S  D  P  S  M  K  P  G  L  S  P  N  K  E  R  G  I  G  L  L  W  G  P  D  C  T  E  D  F  L  K  M  L  N  L  K  :  L  I  I  R  S  H  E  G  P  D  A  R  E  K  R  E  G  M  E  G  M  D  Q  G  Y  T  I  D  H  E  V  Q  S  G  K  L  I  T  V  F  S  A  P  D  Y  P  Q  F  Q  :  A  T  K  D  R  Y  R  N  K  G  A  Y  I  I  L  E  P  P  N  F  D  I  P  V  Y  R  S  F  E  A  V  M  P  R  P  K  :  V  N  P  Y  Y  D  F  E  D  C  I  D  S  D  E  E  L  D  L  A  S  M  A  T  *  R  *  F  S  *  S  A  R  H  L  Q  S  L  K  Y  C  T  C  F  Y  I  I  F  E  V  I  L  V  K  L  F  L  Q  D  F  L  T  V  R  E  I  R  I  M  V  F  Y  S  E  Q  L  L  M  Y  N  L  F  L  Y  Q  I  *  T  D  C  F  L  Y  N  L  I  S  *  M  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="-"/>
                <serials PGL_serial="25" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="133618" stop="133031"/>
                    <exon start="132298" stop="131804"/>
                    <exon start="129712" stop="129566"/>
                    <exon start="128328" stop="128221"/>
                    <exon start="128075" stop="128001"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1410</number_coding_nucleotides>
                  <number_encoded_amino_acids>470</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKLTKIAHPVEMLSESEPPAAAASLPSATPPPPSSDEDFFSSVSVASTSSTSSPSTPIPSPPQLHPEIPISWPEDGTLTLAWVTNLMLAFDWSSKNLAPTELPSVLPVVVFDRLILTASKILHKEPNCVHIDSGSGLGNDSRVVVVGDVHGQLHDVLFLLRDAGFPSDDRFFVFNGDYVDRGAWGLETFLTLLAWKVFMPNRVFLLRGNHESKYCTSVYGFEKEVLAKYADSGKHVYRKCLGCFEGLPLASIIGDHVYTAHGGIFRSIAVTPAKRAKGKKNRKIVSNPDVTTLSLGSMEELLKARRSVLDPPWEGTNLIPGDVLWSDPSMKPGLSPNKERGIGLLWGPDCTEDFLKMLNLKLIIRSHEGPDAREKREGMEGMDQGYTIDHEVQSGKLITVFSAPDYPQFQATKDRYRNKGAYIILEPPNFDIPVYRSFEAVMPRPKVNPYYDFEDCIDSDEELDLASMAT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="133626" e_stop="133031"/>
            <exon e_start="132298" e_stop="131804"/>
            <exon e_start="129712" e_stop="129566"/>
            <exon e_start="128978" e_stop="128761"/>
            <exon e_start="128328" e_stop="128221"/>
            <exon e_start="128075" e_stop="127810"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.522" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.966" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="133626" e_stop="133031" e_length="596"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.967">
            <gDNA_intron_boundary i_start="133030" i_stop="132299" i_length="732"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="132298" e_stop="131804" e_length="495"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.982">
            <gDNA_intron_boundary i_start="131803" i_stop="129713" i_length="2091"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="129712" e_stop="129566" e_length="147"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.000">
            <gDNA_intron_boundary i_start="129565" i_stop="128979" i_length="587"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="128978" e_stop="128761" e_length="218"/>
          </exon>
          <intron i_serial="4" don_prob="0.522" acc_prob="0.995">
            <gDNA_intron_boundary i_start="128760" i_stop="128329" i_length="432"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="128328" e_stop="128221" e_length="108"/>
          </exon>
          <intron i_serial="5" don_prob="0.991" acc_prob="0.966">
            <gDNA_intron_boundary i_start="128220" i_stop="128076" i_length="145"/>
          </intron>
          <exon e_serial="6" e_score="0.996">
            <gDNA_exon_boundary e_start="128075" e_stop="127810" e_length="266"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133626" stop="133060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306357" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133618" stop="133097"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367622" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133592" stop="133046"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302367" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133494" stop="133082"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133314" stop="133031"/>
              <exon start="132298" stop="131984"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252457" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133188" stop="133031"/>
              <exon start="132298" stop="132139"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397302" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133187" stop="133031"/>
              <exon start="132298" stop="131928"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297507" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133171" stop="133031"/>
              <exon start="132298" stop="131804"/>
              <exon start="129712" stop="129694"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396603" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133169" stop="133031"/>
              <exon start="132298" stop="131993"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206436" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129712" stop="129566"/>
              <exon start="128978" stop="128761"/>
              <exon start="128328" stop="128221"/>
              <exon start="128075" stop="127810"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396602" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="25" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAATTAGAGAAAATTAACGAAAATCGCGCATCCAGTTGAAATGTTATCAGAATCAGAACCACCGGCTGCAGCCGCCAGTTTACCATCAGCAACCCCTCCGCCGCCGTCGTCCGATGAGGACTTCTTCTCGTCTGTATCAGTGGCATCGACGTCTTCCACGTCATCGCCATCCACCCCGATTCCTTCACCACCACAGCTTCATCCAGAGATCCCAATTTCATGGCCTGAAGACGGGACCTTAACCCTAGCTTGGGTTACCAACTTGATGCTAGCATTTGATTGGTCATCCAAGAATCTTGCTCCGACGGAGCTGCCATCGGTGTTGCCGGTAGTGGTGTTTGATCGGCTTATACTAACGGCTTCCAAGATCTTGCATAAAGAACCCAATTGTGTGCATATTGATAGCGGGTCGGGGTTGGGAAATGATTCGAGGGTTGTTGTGGTTGGGGACGTGCACGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTCAATGGAGACTATGTCGATAGAGGCGCTTGGGGTCTTGAGACCTTTCTTACCTTGTTGGCTTGGAAG : GTTTTTATGCCCAATAGGGTGTTTCTCCTTCGTGGAAATCACGAGTCGAAGTACTGTACTTCTGTTTATGGTTTTGAAAAGGAGGTTCTAGCGAAGTATGCGGATAGTGGGAAACATGTATACAGGAAATGTTTAGGATGCTTCGAAGGACTTCCTCTTGCATCCATTATTGGGGATCATGTCTACACAGCTCATGGAGGTATTTTCCGCAGTATTGCTGTCACTCCAGCTAAAAGAGCTAAAGGGAAGAAGAACCGTAAAATAGTTTCAAACCCTGATGTTACTACTTTATCTCTTGGTTCTATGGAGGAATTATTAAAAGCTAGGAGATCTGTCCTTGATCCTCCTTGGGAAGGTACGAATCTGATACCGGGTGATGTCTTGTGGTCAGACCCGTCAATGAAACCTGGACTTTCCCCAAATAAAGAAAGAGGAATTGGTCTCTTATGGGGTCCGGATTGCACCGAAGATTTCTTGAAGATGTTGAATTTAAAG : TTGATTATTAGGTCACATGAAGGTCCAGATGCAAGGGAAAAGAGAGAGGGAATGGAAGGAATGGATCAAGGGTACACCATAGATCATGAGGTCCAGTCCGGTAAATTGATTACAGTGTTTAGTGCCCCAGACTATCCACAGTTTCAG : GTTGAAATTGGTTAATTGACCGGATCGTTGCAAGGTAAAAATCTTGCATGACTTGATCGTCAACTGTCACTTTCTCCCTATTTCGGGAAGTAGTTTGTGGGCTTCATTCGTCAATATAAACAAATTTTCCGGTAACACACCTGCTGAGCTTGCTGGAATTGGCCCTTGCGCAAATTTTGGTGTTTACACAGCCAATTGTCTGTTTGTCCCTTCAAGTG : GCAACTAAGGATAGGTACCGAAATAAAGGAGCATATATTATTTTGGAACCTCCTAATTTTGACATCCCCGTTTATCGTAGTTTTGAAGCAGTGATGCCCCGACCCAAG : GTGAATCCATATTATGATTTTGAAGATTGCATTGATTCTGATGAAGAATTAGACTTGGCGTCTATGGCTACATGAAGGTAGTTCTCATGATCAGCGCGACATTTGCAAAGCTTAAAATATTGTACATGCTTCTATATTATTTTTGAGGTGATATTAGTAAAATTATTCCTTCAAGATTTCTTGACTGTTAGAGAGATACGTATCATGGTTTTCTACTCAGAACAGTTGCTGATGTACAACCTTTTTTTGTATCAAATTTAGACAGA</gDNA_template>
            <first_frame> K  I  R  E  N  *  R  K  S  R  I  Q  L  K  C  Y  Q  N  Q  N  H  R  L  Q  P  P  V  Y  H  Q  Q  P  L  R  R  R  R  P  M  R  T  S  S  R  L  Y  Q  W  H  R  R  L  P  R  H  R  H  P  P  R  F  L  H  H  H  S  F  I  Q  R  S  Q  F  H  G  L  K  T  G  P  *  P  *  L  G  L  P  T  *  C  *  H  L  I  G  H  P  R  I  L  L  R  R  S  C  H  R  C  C  R  *  W  C  L  I  G  L  Y  *  R  L  P  R  S  C  I  K  N  P  I  V  C  I  L  I  A  G  R  G  W  E  M  I  R  G  L  L  W  L  G  T  C  T  A  S  Y  M  M  S  C  S  Y  *  E  M  R  V  F  P  L  T  I  G  S  L  C  S  M  E  T  M  S  I  E  A  L  G  V  L  R  P  F  L  P  C  W  L  G  R :   F  L  C  P  I  G  C  F  S  F  V  E  I  T  S  R  S  T  V  L  L  F  M  V  L  K  R  R  F  *  R  S  M  R  I  V  G  N  M  Y  T  G  N  V  *  D  A  S  K  D  F  L  L  H  P  L  L  G  I  M  S  T  Q  L  M  E  V  F  S  A  V  L  L  S  L  Q  L  K  E  L  K  G  R  R  T  V  K  *  F  Q  T  L  M  L  L  L  Y  L  L  V  L  W  R  N  Y  *  K  L  G  D  L  S  L  I  L  L  G  K  V  R  I  *  Y  R  V  M  S  C  G  Q  T  R  Q  *  N  L  D  F  P  Q  I  K  K  E  E  L  V  S  Y  G  V  R  I  A  P  K  I  S  *  R  C  *  I  *  S :   *  L  L  G  H  M  K  V  Q  M  Q  G  K  R  E  R  E  W  K  E  W  I  K  G  T  P  *  I  M  R  S  S  P  V  N  *  L  Q  C  L  V  P  Q  T  I  H  S  F  R :   L  K  L  V  N  *  P  D  R  C  K  V  K  I  L  H  D  L  I  V  N  C  H  F  L  P  I  S  G  S  S  L  W  A  S  F  V  N  I  N  K  F  S  G  N  T  P  A  E  L  A  G  I  G  P  C  A  N  F  G  V  Y  T  A  N  C  L  F  V  P  S  S   : G  N  *  G  *  V  P  K  *  R  S  I  Y  Y  F  G  T  S  *  F  *  H  P  R  L  S  *  F  *  S  S  D  A  P  T  Q   : G  E  S  I  L  *  F  *  R  L  H  *  F  *  *  R  I  R  L  G  V  Y  G  Y  M  K  V  V  L  M  I  S  A  T  F  A  K  L  K  I  L  Y  M  L  L  Y  Y  F  *  G  D  I  S  K  I  I  P  S  R  F  L  D  C  *  R  D  T  Y  H  G  F  L  L  R  T  V  A  D  V  Q  P  F  F  V  S  N  L  D  R </first_frame>
            <second_frame>  K  L  E  K  I  N  E  N  R  A  S  S  *  N  V  I  R  I  R  T  T  G  C  S  R  Q  F  T  I  S  N  P  S  A  A  V  V  R  *  G  L  L  L  V  C  I  S  G  I  D  V  F  H  V  I  A  I  H  P  D  S  F  T  T  T  A  S  S  R  D  P  N  F  M  A  *  R  R  D  L  N  P  S  L  G  Y  Q  L  D  A  S  I  *  L  V  I  Q  E  S  C  S  D  G  A  A  I  G  V  A  G  S  G  V  *  S  A  Y  T  N  G  F  Q  D  L  A  *  R  T  Q  L  C  A  Y  *  *  R  V  G  V  G  K  *  F  E  G  C  C  G  W  G  R  A  R  P  A  T  *  C  L  V  L  I  E  R  C  G  F  S  L  *  R  S  V  L  C  V  Q  W  R  L  C  R  *  R  R  L  G  S  *  D  L  S  Y  L  V  G  L  E   : G  F  Y  A  Q  *  G  V  S  P  S  W  K  S  R  V  E  V  L  Y  F  C  L  W  F  *  K  G  G  S  S  E  V  C  G  *  W  E  T  C  I  Q  E  M  F  R  M  L  R  R  T  S  S  C  I  H  Y  W  G  S  C  L  H  S  S  W  R  Y  F  P  Q  Y  C  C  H  S  S  *  K  S  *  R  E  E  E  P  *  N  S  F  K  P  *  C  Y  Y  F  I  S  W  F  Y  G  G  I  I  K  S  *  E  I  C  P  *  S  S  L  G  R  Y  E  S  D  T  G  *  C  L  V  V  R  P  V  N  E  T  W  T  F  P  K  *  R  K  R  N  W  S  L  M  G  S  G  L  H  R  R  F  L  E  D  V  E  F  K   : V  D  Y  *  V  T  *  R  S  R  C  K  G  K  E  R  G  N  G  R  N  G  S  R  V  H  H  R  S  *  G  P  V  R  *  I  D  Y  S  V  *  C  P  R  L  S  T  V  S   : G  *  N  W  L  I  D  R  I  V  A  R  *  K  S  C  M  T  *  S  S  T  V  T  F  S  L  F  R  E  V  V  C  G  L  H  S  S  I  *  T  N  F  P  V  T  H  L  L  S  L  L  E  L  A  L  A  Q  I  L  V  F  T  Q  P  I  V  C  L  S  L  Q  V  :  A  T  K  D  R  Y  R  N  K  G  A  Y  I  I  L  E  P  P  N  F  D  I  P  V  Y  R  S  F  E  A  V  M  P  R  P  K  :  V  N  P  Y  Y  D  F  E  D  C  I  D  S  D  E  E  L  D  L  A  S  M  A  T  *  R  *  F  S  *  S  A  R  H  L  Q  S  L  K  Y  C  T  C  F  Y  I  I  F  E  V  I  L  V  K  L  F  L  Q  D  F  L  T  V  R  E  I  R  I  M  V  F  Y  S  E  Q  L  L  M  Y  N  L  F  L  Y  Q  I  *  T   </second_frame>
            <third_frame>   N  *  R  K  L  T  K  I  A  H  P  V  E  M  L  S  E  S  E  P  P  A  A  A  A  S  L  P  S  A  T  P  P  P  P  S  S  D  E  D  F  F  S  S  V  S  V  A  S  T  S  S  T  S  S  P  S  T  P  I  P  S  P  P  Q  L  H  P  E  I  P  I  S  W  P  E  D  G  T  L  T  L  A  W  V  T  N  L  M  L  A  F  D  W  S  S  K  N  L  A  P  T  E  L  P  S  V  L  P  V  V  V  F  D  R  L  I  L  T  A  S  K  I  L  H  K  E  P  N  C  V  H  I  D  S  G  S  G  L  G  N  D  S  R  V  V  V  V  G  D  V  H  G  Q  L  H  D  V  L  F  L  L  R  D  A  G  F  P  S  D  D  R  F  F  V  F  N  G  D  Y  V  D  R  G  A  W  G  L  E  T  F  L  T  L  L  A  W  K  :  V  F  M  P  N  R  V  F  L  L  R  G  N  H  E  S  K  Y  C  T  S  V  Y  G  F  E  K  E  V  L  A  K  Y  A  D  S  G  K  H  V  Y  R  K  C  L  G  C  F  E  G  L  P  L  A  S  I  I  G  D  H  V  Y  T  A  H  G  G  I  F  R  S  I  A  V  T  P  A  K  R  A  K  G  K  K  N  R  K  I  V  S  N  P  D  V  T  T  L  S  L  G  S  M  E  E  L  L  K  A  R  R  S  V  L  D  P  P  W  E  G  T  N  L  I  P  G  D  V  L  W  S  D  P  S  M  K  P  G  L  S  P  N  K  E  R  G  I  G  L  L  W  G  P  D  C  T  E  D  F  L  K  M  L  N  L  K  :  L  I  I  R  S  H  E  G  P  D  A  R  E  K  R  E  G  M  E  G  M  D  Q  G  Y  T  I  D  H  E  V  Q  S  G  K  L  I  T  V  F  S  A  P  D  Y  P  Q  F  Q  :  V  E  I  G  *  L  T  G  S  L  Q  G  K  N  L  A  *  L  D  R  Q  L  S  L  S  P  Y  F  G  K  *  F  V  G  F  I  R  Q  Y  K  Q  I  F  R  *  H  T  C  *  A  C  W  N  W  P  L  R  K  F  W  C  L  H  S  Q  L  S  V  C  P  F  K  W :   Q  L  R  I  G  T  E  I  K  E  H  I  L  F  W  N  L  L  I  L  T  S  P  F  I  V  V  L  K  Q  *  C  P  D  P  R :   *  I  H  I  M  I  L  K  I  A  L  I  L  M  K  N  *  T  W  R  L  W  L  H  E  G  S  S  H  D  Q  R  D  I  C  K  A  *  N  I  V  H  A  S  I  L  F  L  R  *  Y  *  *  N  Y  S  F  K  I  S  *  L  L  E  R  Y  V  S  W  F  S  T  Q  N  S  C  *  C  T  T  F  F  C  I  K  F  R  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="-"/>
                <serials PGL_serial="25" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="133618" stop="133031"/>
                    <exon start="132298" stop="131804"/>
                    <exon start="129712" stop="129566"/>
                    <exon start="128978" stop="128964"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1242</number_coding_nucleotides>
                  <number_encoded_amino_acids>414</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKLTKIAHPVEMLSESEPPAAAASLPSATPPPPSSDEDFFSSVSVASTSSTSSPSTPIPSPPQLHPEIPISWPEDGTLTLAWVTNLMLAFDWSSKNLAPTELPSVLPVVVFDRLILTASKILHKEPNCVHIDSGSGLGNDSRVVVVGDVHGQLHDVLFLLRDAGFPSDDRFFVFNGDYVDRGAWGLETFLTLLAWKVFMPNRVFLLRGNHESKYCTSVYGFEKEVLAKYADSGKHVYRKCLGCFEGLPLASIIGDHVYTAHGGIFRSIAVTPAKRAKGKKNRKIVSNPDVTTLSLGSMEELLKARRSVLDPPWEGTNLIPGDVLWSDPSMKPGLSPNKERGIGLLWGPDCTEDFLKMLNLKLIIRSHEGPDAREKREGMEGMDQGYTIDHEVQSGKLITVFSAPDYPQFQVEIG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="-"/>
                <serials PGL_serial="25" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="128859" stop="128761"/>
                    <exon start="128328" stop="128221"/>
                    <exon start="128075" stop="128001"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TNFPVTHLLSLLELALAQILVFTQPIVCLSLQVATKDRYRNKGAYIILEPPNFDIPVYRSFEAVMPRPKVNPYYDFEDCIDSDEELDLASMAT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="133626" e_stop="133031"/>
            <exon e_start="132298" e_stop="132100"/>
            <exon e_start="131907" e_stop="131804"/>
            <exon e_start="129712" e_stop="129566"/>
            <exon e_start="128328" e_stop="128221"/>
            <exon e_start="128075" e_stop="128034"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.966" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="133626" e_stop="133031" e_length="596"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.967">
            <gDNA_intron_boundary i_start="133030" i_stop="132299" i_length="732"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="132298" e_stop="132100" e_length="199"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="132099" i_stop="131908" i_length="192"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="131907" e_stop="131804" e_length="104"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.982">
            <gDNA_intron_boundary i_start="131803" i_stop="129713" i_length="2091"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="129712" e_stop="129566" e_length="147"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="129565" i_stop="128329" i_length="1237"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="128328" e_stop="128221" e_length="108"/>
          </exon>
          <intron i_serial="5" don_prob="0.991" acc_prob="0.966">
            <gDNA_intron_boundary i_start="128220" i_stop="128076" i_length="145"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="128075" e_stop="128034" e_length="42"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133626" stop="133060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306357" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133618" stop="133097"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367622" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133592" stop="133046"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302367" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133494" stop="133082"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133311" stop="133031"/>
              <exon start="132298" stop="132100"/>
              <exon start="131907" stop="131804"/>
              <exon start="129712" stop="129566"/>
              <exon start="128328" stop="128221"/>
              <exon start="128075" stop="128034"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701946" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133311" stop="133031"/>
              <exon start="132298" stop="132100"/>
              <exon start="131907" stop="131804"/>
              <exon start="129712" stop="129566"/>
              <exon start="128328" stop="128221"/>
              <exon start="128075" stop="128035"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701114" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133188" stop="133031"/>
              <exon start="132298" stop="132139"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397302" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="25" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAATTAGAGAAAATTAACGAAAATCGCGCATCCAGTTGAAATGTTATCAGAATCAGAACCACCGGCTGCAGCCGCCAGTTTACCATCAGCAACCCCTCCGCCGCCGTCGTCCGATGAGGACTTCTTCTCGTCTGTATCAGTGGCATCGACGTCTTCCACGTCATCGCCATCCACCCCGATTCCTTCACCACCACAGCTTCATCCAGAGATCCCAATTTCATGGCCTGAAGACGGGACCTTAACCCTAGCTTGGGTTACCAACTTGATGCTAGCATTTGATTGGTCATCCAAGAATCTTGCTCCGACGGAGCTGCCATCGGTGTTGCCGGTAGTGGTGTTTGATCGGCTTATACTAACGGCTTCCAAGATCTTGCATAAAGAACCCAATTGTGTGCATATTGATAGCGGGTCGGGGTTGGGAAATGATTCGAGGGTTGTTGTGGTTGGGGACGTGCACGGCCAGCTACATGATGTCTTGTTCTTATTGAGAGATGCGGGTTTTCCCTCTGACGATCGGTTCTTTGTGTTCAATGGAGACTATGTCGATAGAGGCGCTTGGGGTCTTGAGACCTTTCTTACCTTGTTGGCTTGGAAG : GTTTTTATGCCCAATAGGGTGTTTCTCCTTCGTGGAAATCACGAGTCGAAGTACTGTACTTCTGTTTATGGTTTTGAAAAGGAGGTTCTAGCGAAGTATGCGGATAGTGGGAAACATGTATACAGGAAATGTTTAGGATGCTTCGAAGGACTTCCTCTTGCATCCATTATTGGGGATCATGTCTACACAGCTCATGGAG : ACCCGTCAATGAAACCTGGACTTTCCCCAAATAAAGAAAGAGGAATTGGTCTCTTATGGGGTCCGGATTGCACCGAAGATTTCTTGAAGATGTTGAATTTAAAG : TTGATTATTAGGTCACATGAAGGTCCAGATGCAAGGGAAAAGAGAGAGGGAATGGAAGGAATGGATCAAGGGTACACCATAGATCATGAGGTCCAGTCCGGTAAATTGATTACAGTGTTTAGTGCCCCAGACTATCCACAGTTTCAG : GCAACTAAGGATAGGTACCGAAATAAAGGAGCATATATTATTTTGGAACCTCCTAATTTTGACATCCCCGTTTATCGTAGTTTTGAAGCAGTGATGCCCCGACCCAAG : GTGAATCCATATTATGATTTTGAAGATTGCATTGATTCTGAT</gDNA_template>
            <first_frame> K  I  R  E  N  *  R  K  S  R  I  Q  L  K  C  Y  Q  N  Q  N  H  R  L  Q  P  P  V  Y  H  Q  Q  P  L  R  R  R  R  P  M  R  T  S  S  R  L  Y  Q  W  H  R  R  L  P  R  H  R  H  P  P  R  F  L  H  H  H  S  F  I  Q  R  S  Q  F  H  G  L  K  T  G  P  *  P  *  L  G  L  P  T  *  C  *  H  L  I  G  H  P  R  I  L  L  R  R  S  C  H  R  C  C  R  *  W  C  L  I  G  L  Y  *  R  L  P  R  S  C  I  K  N  P  I  V  C  I  L  I  A  G  R  G  W  E  M  I  R  G  L  L  W  L  G  T  C  T  A  S  Y  M  M  S  C  S  Y  *  E  M  R  V  F  P  L  T  I  G  S  L  C  S  M  E  T  M  S  I  E  A  L  G  V  L  R  P  F  L  P  C  W  L  G  R :   F  L  C  P  I  G  C  F  S  F  V  E  I  T  S  R  S  T  V  L  L  F  M  V  L  K  R  R  F  *  R  S  M  R  I  V  G  N  M  Y  T  G  N  V  *  D  A  S  K  D  F  L  L  H  P  L  L  G  I  M  S  T  Q  L  M  E  :  T  R  Q  *  N  L  D  F  P  Q  I  K  K  E  E  L  V  S  Y  G  V  R  I  A  P  K  I  S  *  R  C  *  I  *  S :   *  L  L  G  H  M  K  V  Q  M  Q  G  K  R  E  R  E  W  K  E  W  I  K  G  T  P  *  I  M  R  S  S  P  V  N  *  L  Q  C  L  V  P  Q  T  I  H  S  F  R :   Q  L  R  I  G  T  E  I  K  E  H  I  L  F  W  N  L  L  I  L  T  S  P  F  I  V  V  L  K  Q  *  C  P  D  P  R :   *  I  H  I  M  I  L  K  I  A  L  I  L   </first_frame>
            <second_frame>  K  L  E  K  I  N  E  N  R  A  S  S  *  N  V  I  R  I  R  T  T  G  C  S  R  Q  F  T  I  S  N  P  S  A  A  V  V  R  *  G  L  L  L  V  C  I  S  G  I  D  V  F  H  V  I  A  I  H  P  D  S  F  T  T  T  A  S  S  R  D  P  N  F  M  A  *  R  R  D  L  N  P  S  L  G  Y  Q  L  D  A  S  I  *  L  V  I  Q  E  S  C  S  D  G  A  A  I  G  V  A  G  S  G  V  *  S  A  Y  T  N  G  F  Q  D  L  A  *  R  T  Q  L  C  A  Y  *  *  R  V  G  V  G  K  *  F  E  G  C  C  G  W  G  R  A  R  P  A  T  *  C  L  V  L  I  E  R  C  G  F  S  L  *  R  S  V  L  C  V  Q  W  R  L  C  R  *  R  R  L  G  S  *  D  L  S  Y  L  V  G  L  E   : G  F  Y  A  Q  *  G  V  S  P  S  W  K  S  R  V  E  V  L  Y  F  C  L  W  F  *  K  G  G  S  S  E  V  C  G  *  W  E  T  C  I  Q  E  M  F  R  M  L  R  R  T  S  S  C  I  H  Y  W  G  S  C  L  H  S  S  W  R :   P  V  N  E  T  W  T  F  P  K  *  R  K  R  N  W  S  L  M  G  S  G  L  H  R  R  F  L  E  D  V  E  F  K   : V  D  Y  *  V  T  *  R  S  R  C  K  G  K  E  R  G  N  G  R  N  G  S  R  V  H  H  R  S  *  G  P  V  R  *  I  D  Y  S  V  *  C  P  R  L  S  T  V  S   : G  N  *  G  *  V  P  K  *  R  S  I  Y  Y  F  G  T  S  *  F  *  H  P  R  L  S  *  F  *  S  S  D  A  P  T  Q   : G  E  S  I  L  *  F  *  R  L  H  *  F  *  </second_frame>
            <third_frame>   N  *  R  K  L  T  K  I  A  H  P  V  E  M  L  S  E  S  E  P  P  A  A  A  A  S  L  P  S  A  T  P  P  P  P  S  S  D  E  D  F  F  S  S  V  S  V  A  S  T  S  S  T  S  S  P  S  T  P  I  P  S  P  P  Q  L  H  P  E  I  P  I  S  W  P  E  D  G  T  L  T  L  A  W  V  T  N  L  M  L  A  F  D  W  S  S  K  N  L  A  P  T  E  L  P  S  V  L  P  V  V  V  F  D  R  L  I  L  T  A  S  K  I  L  H  K  E  P  N  C  V  H  I  D  S  G  S  G  L  G  N  D  S  R  V  V  V  V  G  D  V  H  G  Q  L  H  D  V  L  F  L  L  R  D  A  G  F  P  S  D  D  R  F  F  V  F  N  G  D  Y  V  D  R  G  A  W  G  L  E  T  F  L  T  L  L  A  W  K  :  V  F  M  P  N  R  V  F  L  L  R  G  N  H  E  S  K  Y  C  T  S  V  Y  G  F  E  K  E  V  L  A  K  Y  A  D  S  G  K  H  V  Y  R  K  C  L  G  C  F  E  G  L  P  L  A  S  I  I  G  D  H  V  Y  T  A  H  G   : D  P  S  M  K  P  G  L  S  P  N  K  E  R  G  I  G  L  L  W  G  P  D  C  T  E  D  F  L  K  M  L  N  L  K  :  L  I  I  R  S  H  E  G  P  D  A  R  E  K  R  E  G  M  E  G  M  D  Q  G  Y  T  I  D  H  E  V  Q  S  G  K  L  I  T  V  F  S  A  P  D  Y  P  Q  F  Q  :  A  T  K  D  R  Y  R  N  K  G  A  Y  I  I  L  E  P  P  N  F  D  I  P  V  Y  R  S  F  E  A  V  M  P  R  P  K  :  V  N  P  Y  Y  D  F  E  D  C  I  D  S  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0172H10.1" strand="-"/>
                <serials PGL_serial="25" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="133618" stop="133031"/>
                    <exon start="132298" stop="132100"/>
                    <exon start="131907" stop="131804"/>
                    <exon start="129712" stop="129566"/>
                    <exon start="128328" stop="128221"/>
                    <exon start="128075" stop="128034"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1188</number_coding_nucleotides>
                  <number_encoded_amino_acids>396</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKLTKIAHPVEMLSESEPPAAAASLPSATPPPPSSDEDFFSSVSVASTSSTSSPSTPIPSPPQLHPEIPISWPEDGTLTLAWVTNLMLAFDWSSKNLAPTELPSVLPVVVFDRLILTASKILHKEPNCVHIDSGSGLGNDSRVVVVGDVHGQLHDVLFLLRDAGFPSDDRFFVFNGDYVDRGAWGLETFLTLLAWKVFMPNRVFLLRGNHESKYCTSVYGFEKEVLAKYADSGKHVYRKCLGCFEGLPLASIIGDHVYTAHGDPSMKPGLSPNKERGIGLLWGPDCTEDFLKMLNLKLIIRSHEGPDAREKREGMEGMDQGYTIDHEVQSGKLITVFSAPDYPQFQATKDRYRNKGAYIILEPPNFDIPVYRSFEAVMPRPKVNPYYDFEDCIDSD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 229 chains have been computed
$ 
$ memory statistics:
$ 823040 bytes spliced alignments in total
$ 180 spliced alignments have been stored
$ 4572 bytes was the average size of a spliced alignment
$ 39960 bytes predicted gene locations in total
$ 25 predicted gene locations have been stored
$ 1598 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 255 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 09:46:31
-->
