<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 10:14:44"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E734085" ref_strand="+" ref_description="SGN-E734085 [LB11DA03]">
      <seq>cttgcacggagaagtatgcagaaatttactacaacaggcctgatgtgcagaaagctatgcacgcgaatacaacaagaattccttataaatggacagcctgcagtgagacattgaatcgaaactggaatgatacagatgactcgattctcccaatctaccaggaactaattgctgctggattgagaatttgggttttcagtggtgatgtagactcagttgtacccgttaccgcgacaaggtattccctagcacagctcaagttatctaccacaactccatggtatccttggtatgtcaaaaaacaggttgggggctggacagaggtatacaaaggtctaacatttgcaacagtgagaggggcaggtcatgaagtgccattattcaagccaagggcagcttatcaactatttagatcatttttaaaaggagagccacttccaaagtcatgattgttgtgacattataaattatactattattagtattatgtatgcttcaaaaatgtcaattgtttctactcttaggctaagaattaaagagttgccaagttgaaagaaaagaattgtttcaacttttaaaagagaattgatggaaaaagggagattacaataggactttgggttggggaaaaaaaaaggtatcaatttgttgtaacaatattaggtaggtgtggtttgaagtctacctcacgtgttttaggaaaatgaattttctttatatttcgtatttcaataaaaagggattagaattcttattannnnanantaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="4821" stop="3231"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4521" g_stop="4419" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="103" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4418" i_stop="4350" i_length="69">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4349" g_stop="4254" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="199" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4253" i_stop="4179" i_length="75">
            <donor d_prob="0.869" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4178" g_stop="4073" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="305" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="4072" i_stop="3983" i_length="90">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="3982" g_stop="3528" g_length="455"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="760" r_length="455" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="3527" i_stop="3317" i_length="211">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.859" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="3316" g_stop="3304" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="761" r_stop="773" r_length="13" r_score="0.538"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-E734085" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>773</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E734085" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4521" e_stop="4419"/>
          <exon e_start="4349" e_stop="4254"/>
          <exon e_start="4178" e_stop="4073"/>
          <exon e_start="3982" e_stop="3528"/>
          <exon e_start="3316" e_stop="3304"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGCACGGAGAAGTATGCAGAAATTTACTACAACAGGCCTGATGTGCAGAAAGCTATGCACGCGAATACAACAAGAATTCCTTATAAATGGACAGCCTGCAGGTAAATAATTTGTCTTCCAAACTCCCACTATGTTGATTGATCTTACAACTGATTGATATATGTTTACAGTGAGACATTGAATCGAAACTGGAATGATACAGATGACTCGATTCTCCCAATCTACCAGGAACTAATTGCTGCTGGATTGAGAATTTGGGTTTTCAGGTATGTGACATTGAGTTGAAAACATTTTCCCAAAATTCCAGGGCAACTCCATTTGATCATTTTTTTGTTTTGCAGTGGTGATGTAGACTCAGTTGTACCCGTTACCGCGACAAGGTATTCCCTAGCACAGCTCAAGTTATCTACCACAACTCCATGGTATCCTTGGTATGTCAAAAAACAGGTGAGTAATGTAAAAAAAAAACGAATTCTAGTTTTCCATGATCACTTATATTGATTAACAACTTAATTATTATGTTATGGTTATTGTAAGGTTGGGGGCTGGACAGAGGTATACAAAGGTCTAACATTTGCAACAGTGAGAGGGGCAGGTCATGAAGTGCCATTATTCAAGCCAAGGGCAGCTTATCAACTATTTAGATCATTTTTAAAAGGAGAGCCACTTCCAAAGTCATGATTGTTGTGACATTATAAATTATACTATTATTAGTATTATGTATGCTTCAAAAATGTCAATTGTTTCTACTCTTAGGCTAAGAATTAAAGAGTTGCCAAGTTGAAAGAAAAGAATTGTTTCAACTTTTAAAAGAGAATTGATGGAAAAAGGGAGATTACAATAGGACTTTGGGTTGGGGAAAAAAAAAGGTATCAATTTGTTGTAACAATATTAGGTAGGTGTGGTTTGAAGTCTACCTCACGTGTTTTAGGAAAATGAATTTTCTTTATATTTCGTATTTCAATAAAAAGGGATTAGAATTCTTATTAGTAGTATAATCTCTTCCATCCATCTTTATTTGTTTATATTCTATTTTATTTAATAAATATAATTTTACATTTATTCATTATAAATTATTTAAATAATATAATAATCTCTTAATAATTCAAATTCAAACTATAAAGAGAATATTGAATTTGGGTCTTCATCACAATGTGGACCCATTATAAATTAGAATAATTACACAAATGGTCCTTTTTTTAGGCCACTAACATAA</genome_strand>
        <mrna_strand>CTTGCACGGAGAAGTATGCAGAAATTTACTACAACAGGCCTGATGTGCAGAAAGCTATGCACGCGAATACAACAAGAATTCCTTATAAATGGACAGCCTGCAG.....................................................................TGAGACATTGAATCGAAACTGGAATGATACAGATGACTCGATTCTCCCAATCTACCAGGAACTAATTGCTGCTGGATTGAGAATTTGGGTTTTCAG...........................................................................TGGTGATGTAGACTCAGTTGTACCCGTTACCGCGACAAGGTATTCCCTAGCACAGCTCAAGTTATCTACCACAACTCCATGGTATCCTTGGTATGTCAAAAAACAG..........................................................................................GTTGGGGGCTGGACAGAGGTATACAAAGGTCTAACATTTGCAACAGTGAGAGGGGCAGGTCATGAAGTGCCATTATTCAAGCCAAGGGCAGCTTATCAACTATTTAGATCATTTTTAAAAGGAGAGCCACTTCCAAAGTCATGATTGTTGTGACATTATAAATTATACTATTATTAGTATTATGTATGCTTCAAAAATGTCAATTGTTTCTACTCTTAGGCTAAGAATTAAAGAGTTGCCAAGTTGAAAGAAAAGAATTGTTTCAACTTTTAAAAGAGAATTGATGGAAAAAGGGAGATTACAATAGGACTTTGGGTTGGGGAAAAAAAAAGGTATCAATTTGTTGTAACAATATTAGGTAGGTGTGGTTTGAAGTCTACCTCACGTGTTTTAGGAAAATGAATTTTCTTTATATTTCGTATTTCAATAAAAAGGGATTAGAATTCTTATTANNN...................................................................................................................................................................................................................NANANTAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E326199" ref_strand="+" ref_description="SGN-E326199 [cTOC-16-F13]">
      <seq>tcatcacctcattgctattcacacacaaatagcaaatttctttatttctttcagtttctcaacaacaataatatggccaaacgaagattagctttgcttttgattttagcaacaattgtatgtgtgagtgctgcaaagttaaacaaatatcaggatgaagaagacgctgatagaataatatcgctgcctggacaacccaaagtttcgttccatcagtactcagggtatgtcactgtcaatcagtttgctggaagagctctattttactggcttactgaagctattgatgaaccacttactaagcctttggttatttggcttaatggaggtccaggatgctcttcagtggcctatggtgcatctgaagaaatagggccattcaggataaacaagacggcttcgggactgtatttgaataagttttcatggaacaaattggcaaatttactattccttgaaactccagcaggggttggattttcctacagcaataggtcctctgatctccttgacaccggggatattcgcactgctaaggactcacttcagttccttatccactggatgaatcggttcccacgctacagaaatcgtgaagtctacatcacaggggagagctatgctggtcattatgtccctcagctagccagagaaatagttcattacaatggcaactctnagaaccaatcaacctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="9146" stop="4721"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8846" g_stop="8519" g_length="328"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="328" r_length="328" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8518" i_stop="6492" i_length="2027">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6491" g_stop="6288" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="532" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6287" i_stop="5185" i_length="1103">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5184" g_stop="5021" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="533" r_stop="695" r_length="163" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-E326199" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E326199" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8846" e_stop="8519"/>
          <exon e_start="6491" e_stop="6288"/>
          <exon e_start="5184" e_stop="5021"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATCACCTCATTGCTATTCACACACAAATAGCAAATTTCTTTATTTCTTTCAGTTTCTCAACAACAATAATATGGCCAAACGAAGATTAGCTTTGCTTTTGATTTTAGCAACAATTGTATGTGTGAGTGCTGCAAAGTTAAACAAATATCAGGATGAAGAAGACGCTGATAGAATAATATCGCTGCCTGGACAACCCAAAGTTTCGTTCCATCAGTACTCAGGGTATGTCACTGTCAATCAGTTTGCTGGAAGAGCTCTATTTTACTGGCTTACTGAAGCTATTGATGAACCACTTACTAAGCCTTTGGTTATTTGGCTTAATGGAGGTCAGATCTCTCTTAAATTTCTACGTGAAAAGTTCCTTTCTATTTTTTTCTATGTTTGATTTTACTTGTTATATTTCATTTTTAGTGTATGATCGATCGTTAATTTTGATGAAAAAGTAAAAATGGAGGAGATAATAACTATTTTTGGCGCATACGCCCCGTATCCTCAAGGTCTAATGTCTGACACATACATAACTTCTTCGGGAAATGGAACACTAATTATGATTACGTGAACTTCTGGTTACTGTTCTATTCATCCTTCCTTTTCTTCTTTTTCCTGTGACTAAAAAGGACTTAAAAGAAAAGGTTTCTATTTCTTTTAACTATATGTTTCTGTTTAAAACAGCGATTATTCAATTTAGTTGGATTTTAATATGAAACTGAGATCGAGAGAAAAGTCTCACTCGTTATTGATTATGTGTTTTGACTCATACATACATTATGTGTTGTGCATTTAAAAGTCATTTTGTCGGTTAATTATTGAGGGTTTTTAGCTTAGGTATTTGATAGTTGAGTACTGGGAAAGGGGGGGCCGTTTAGTTTAGTCATGACTAAACTGTCGACTGATATGGTTCATTATCCATGAACAGATAAGACATTATCTTTGCCAGTTGCTATTTCTCTCTCTCTCTCTCTTCACATTAATATTTGCACGCAGTGAAAATCAATGCTGTTACAACCAACTCCTCATTTAATTTTTCAACTTCATTTCGTGCCCAGACTGGTCTAACATAGATGCCCACACCAATTACGCTTCCGCAACCACCTTCCCCATGTCAGCTACCTAACAGCCTCCTTAAAAACATATTCGAATTTTAAATTTCATAAGTTCAATCATTACCTCTCAAAACTATTGAATTCAGTTGAACTGTGTGATGCATTGGTTATGGGCATGATGCTCTTCGCACAGGACATAGGTTGGATCTTAATGACGAAGCCAATGATTTAAATAAGGGGATTGGATTCACAGAGTAATATAATTTTTATCTTTTTAAGTGTAAAATTATAGGTATTGAGCCTCACGCCCCCGAAATTTAGCCTGAAGGGAGAAGGATTACCAAGTTTTAAATGAGGTCATCCATGTGAGCCTTTTTAATTCGTTAACATATATTTCACGCCTAATGCTGGGCATCTGGTACAAAATTCGAGGCCCAACATCGAGTAAAATAAGTCATACTCTCTGCTACTTATAAAATTATGTATAGTACGTATTCATATTCCAAAAAAAGATTATACTAGCCTTATAAAGAGGTCCCATCTCATGTATAACTTTTTCATTCTTTTAAGGCAAGGATACTTTAACTAATGGATTTGAACAATTTTAATACATGCAAATAGATAATAGTAATATTTTATACCCTTATTTTCATCACTATTATAGTAATATTTCAACAAAGGAGTTCCGTTGCATCCCTGCCCCTGACCTCAGAAATAAGGTGTCTTCAAATGAGAATAGGAAAGATTCTTTACCGTGAATTATGTTGATAACATTAAATTGTAGCCAACTAAACTTAGTACTGTTTGGGATCTGTCGTCATTTTCTTATAAATGAGGTTTTAATTTCTTGACCATATTGTTCATTATTAGATACATGTGCTCATCTCAACTGTATGTGATAAAGGAGCTAGACACACTCTTCTGCGGGGACCCCTTATATTTTTTTAGTCCTAGTAATTTCTGCTACTACTTCAGATTTCTGGACTGACACTCTGATAAAAATTTTAACCATAGGTGAATTCAAGATGTACATGTGACGTCTTTAAACTTTAAAGTTTTCAATATTTAATTCATTCTACATTTGAAATTCTTCTAATGTAGCTAACCAACTGAGTTACTAAAAAATCATTACTTTAGAGCACCAAAAGCTTGGAATGACGAGAAACTTGAACTCATAAGTTTTAAATTTTAGTTCCGTCTCTGCTTTGTAATAAGCATGATCTACTGAAAAAACTGGATGATATAAATTGTTATAGATAATATTGTGCGGATTGTGTAAAAAACTGAGTAATTTATATTGGGAAAAACAGGTCCAGGATGCTCTTCAGTGGCCTATGGTGCATCTGAAGAAATAGGGCCATTCAGGATAAACAAGACGGCTTCGGGACTGTATTTGAATAAGTTTTCATGGAACAAATTGGCAAATTTACTATTCCTTGAAACTCCAGCAGGGGTTGGATTTTCCTACAGCAATAGGTCCTCTGATCTCCTTGACACCGGGGATATTCGCACTGGTACGAACATATTGTTGACTTTGATTAAGCCCTCTCTTTTATCTTGTTGCTAATTAAATTATTTTTTTTCTTAGCTTAGAAATGTCTCAAATCTGAAGACTGATTGACCATGGATTTGTAGTCATATTTGGGGTGCTTATTCTAACTCCTAATGTAGTAAACATGAAAGTGATGGATGCATACCTGCCCCTGAGTAAACGTGACAAATGAACAAGGTTTTTGGATTTAAATGGGTTAATTAATATATCATAACGCAATTCGCTCAATGTGTGACCCGACCTTCTCTCTTTTTCCCTGTTTGGATGGACTTATTTTAAGTGATTTTATGTTTAAATAGCGTTTAACCATTTTTTGTACAGTTTGTGAAAATTCAGGAAAGTATTCTTAAGCTGAATAATTACAAGTTAGTATTTTTAACTTATGACTTATATGCAATAGCCGTTTTTTGCTTATAAGTCATAAGCTATAAGTCTATCCAACCAGTTACATTAATCAAGTCAACGATTACGACTGGATCATAATGCAATCCATTTAAACTTGAACGGATGGAACATGTTAGTAAAACAAATTAATCATATTTGCTTGCTTATTCTCTAATAACTACTAATCTAGTATAAAACTGAAGTGATGGTGGCATGCTTGCTCATGACTTTTCCTCTGTGTAATCAATTGTGTCAAAAGTGCCCATTTTAGGAGCACATGAGAAAGTGCATTTTAGCACTCAATTGCAATGTGGCCTACTTTATGATTTTTGGAGTCAATGCTGCAAGTGTTAGCTACCTTACATGTTGCTATCTGGAGTCAATTTTACTATCACCACTATAGTACTATTCAATCAATCAAACAGCTAAATATTCGCCACTGAAACGAAAATCTTCTCCAAGTAATTGATTTGACTTAATCGTTGAAATATATTATGCGACTTGAGTGCTTGATCATATTAGTACTCTGTTCTGTCTTGTCCTATCGATTTGGAAAAACCTTATCCGCACCTGTTTTTTGCACTAACTTTGTTAATTTATTGTAGTTAAGTGATTAATTCATATGGGTATATACATGATTAATTTGAATGAGATGCTGACTCTTTTGTGTATTTTTATCAGCTAAGGACTCACTTCAGTTCCTTATCCACTGGATGAATCGGTTCCCACGCTACAGAAATCGTGAAGTCTACATCACAGGGGAGAGCTATGCTGGTCATTATGTCCCTCAGCTAGCCAGAGAAATAGTTCATTACAATGCCAACTCTAAGAACCCAATCAACCTC</genome_strand>
        <mrna_strand>TCATCACCTCATTGCTATTCACACACAAATAGCAAATTTCTTTATTTCTTTCAGTTTCTCAACAACAATAATATGGCCAAACGAAGATTAGCTTTGCTTTTGATTTTAGCAACAATTGTATGTGTGAGTGCTGCAAAGTTAAACAAATATCAGGATGAAGAAGACGCTGATAGAATAATATCGCTGCCTGGACAACCCAAAGTTTCGTTCCATCAGTACTCAGGGTATGTCACTGTCAATCAGTTTGCTGGAAGAGCTCTATTTTACTGGCTTACTGAAGCTATTGATGAACCACTTACTAAGCCTTTGGTTATTTGGCTTAATGGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAGGATGCTCTTCAGTGGCCTATGGTGCATCTGAAGAAATAGGGCCATTCAGGATAAACAAGACGGCTTCGGGACTGTATTTGAATAAGTTTTCATGGAACAAATTGGCAAATTTACTATTCCTTGAAACTCCAGCAGGGGTTGGATTTTCCTACAGCAATAGGTCCTCTGATCTCCTTGACACCGGGGATATTCGCACTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAGGACTCACTTCAGTTCCTTATCCACTGGATGAATCGGTTCCCACGCTACAGAAATCGTGAAGTCTACATCACAGGGGAGAGCTATGCTGGTCATTATGTCCCTCAGCTAGCCAGAGAAATAGTTCATTACAATGGCAACTCTNAGAA-CCAATCAACCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E314641" ref_strand="+" ref_description="SGN-E314641 [cTOA-20-P13]">
      <seq>taacactcccgcccttgatgacctatatcatcacctcattgctattcacacacaaatagcaaatttctttatttctttcagtttctcaacaacaataatatggccaaacgaagattagctttgcttttgattttagcaacaattgtatgtgtgagtgctgcaaagttaaacaaatatcaggatgaagaagacgctgatagaataatatcgctgcctggacaacccaaagtttcgttccatcagtactcagggtatgtcactgtcaatcagtttgctggaagagctctattttactggcttactgaagctattgatgaaccacttactaagcctttggttatttggcttaatggaggtccaggatgctcttcagtggcctatggtgcatctgaagaaatagggccattcaggataaacaagacggcttcgggactgtatttgaataagttttcatggaacaaattggcaaatttactattccttgaaactccagcaggggttggattttcctacagcaataggtcctctgatctccttgacaccggggatattcgcactgctaaggactcacttcagttccttatccactggatgaatcggttcccacgctacagaaatcgtgaagtctacatcacaggggagagctatgctggtcattatgtccctcagctagcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="9173" stop="4769"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8873" g_stop="8519" g_length="355"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="355" r_length="355" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8518" i_stop="6492" i_length="2027">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6491" g_stop="6288" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="559" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6287" i_stop="5185" i_length="1103">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5184" g_stop="5069" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="560" r_stop="675" r_length="116" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-E314641" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>675</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E314641" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8873" e_stop="8519"/>
          <exon e_start="6491" e_stop="6288"/>
          <exon e_start="5184" e_stop="5069"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAACACTCCCGCCCTTGATGACCTATATCATCACCTCATTGCTATTCACACACAAATAGCAAATTTCTTTATTTCTTTCAGTTTCTCAACAACAATAATATGGCCAAACGAAGATTAGCTTTGCTTTTGATTTTAGCAACAATTGTATGTGTGAGTGCTGCAAAGTTAAACAAATATCAGGATGAAGAAGACGCTGATAGAATAATATCGCTGCCTGGACAACCCAAAGTTTCGTTCCATCAGTACTCAGGGTATGTCACTGTCAATCAGTTTGCTGGAAGAGCTCTATTTTACTGGCTTACTGAAGCTATTGATGAACCACTTACTAAGCCTTTGGTTATTTGGCTTAATGGAGGTCAGATCTCTCTTAAATTTCTACGTGAAAAGTTCCTTTCTATTTTTTTCTATGTTTGATTTTACTTGTTATATTTCATTTTTAGTGTATGATCGATCGTTAATTTTGATGAAAAAGTAAAAATGGAGGAGATAATAACTATTTTTGGCGCATACGCCCCGTATCCTCAAGGTCTAATGTCTGACACATACATAACTTCTTCGGGAAATGGAACACTAATTATGATTACGTGAACTTCTGGTTACTGTTCTATTCATCCTTCCTTTTCTTCTTTTTCCTGTGACTAAAAAGGACTTAAAAGAAAAGGTTTCTATTTCTTTTAACTATATGTTTCTGTTTAAAACAGCGATTATTCAATTTAGTTGGATTTTAATATGAAACTGAGATCGAGAGAAAAGTCTCACTCGTTATTGATTATGTGTTTTGACTCATACATACATTATGTGTTGTGCATTTAAAAGTCATTTTGTCGGTTAATTATTGAGGGTTTTTAGCTTAGGTATTTGATAGTTGAGTACTGGGAAAGGGGGGGCCGTTTAGTTTAGTCATGACTAAACTGTCGACTGATATGGTTCATTATCCATGAACAGATAAGACATTATCTTTGCCAGTTGCTATTTCTCTCTCTCTCTCTCTTCACATTAATATTTGCACGCAGTGAAAATCAATGCTGTTACAACCAACTCCTCATTTAATTTTTCAACTTCATTTCGTGCCCAGACTGGTCTAACATAGATGCCCACACCAATTACGCTTCCGCAACCACCTTCCCCATGTCAGCTACCTAACAGCCTCCTTAAAAACATATTCGAATTTTAAATTTCATAAGTTCAATCATTACCTCTCAAAACTATTGAATTCAGTTGAACTGTGTGATGCATTGGTTATGGGCATGATGCTCTTCGCACAGGACATAGGTTGGATCTTAATGACGAAGCCAATGATTTAAATAAGGGGATTGGATTCACAGAGTAATATAATTTTTATCTTTTTAAGTGTAAAATTATAGGTATTGAGCCTCACGCCCCCGAAATTTAGCCTGAAGGGAGAAGGATTACCAAGTTTTAAATGAGGTCATCCATGTGAGCCTTTTTAATTCGTTAACATATATTTCACGCCTAATGCTGGGCATCTGGTACAAAATTCGAGGCCCAACATCGAGTAAAATAAGTCATACTCTCTGCTACTTATAAAATTATGTATAGTACGTATTCATATTCCAAAAAAAGATTATACTAGCCTTATAAAGAGGTCCCATCTCATGTATAACTTTTTCATTCTTTTAAGGCAAGGATACTTTAACTAATGGATTTGAACAATTTTAATACATGCAAATAGATAATAGTAATATTTTATACCCTTATTTTCATCACTATTATAGTAATATTTCAACAAAGGAGTTCCGTTGCATCCCTGCCCCTGACCTCAGAAATAAGGTGTCTTCAAATGAGAATAGGAAAGATTCTTTACCGTGAATTATGTTGATAACATTAAATTGTAGCCAACTAAACTTAGTACTGTTTGGGATCTGTCGTCATTTTCTTATAAATGAGGTTTTAATTTCTTGACCATATTGTTCATTATTAGATACATGTGCTCATCTCAACTGTATGTGATAAAGGAGCTAGACACACTCTTCTGCGGGGACCCCTTATATTTTTTTAGTCCTAGTAATTTCTGCTACTACTTCAGATTTCTGGACTGACACTCTGATAAAAATTTTAACCATAGGTGAATTCAAGATGTACATGTGACGTCTTTAAACTTTAAAGTTTTCAATATTTAATTCATTCTACATTTGAAATTCTTCTAATGTAGCTAACCAACTGAGTTACTAAAAAATCATTACTTTAGAGCACCAAAAGCTTGGAATGACGAGAAACTTGAACTCATAAGTTTTAAATTTTAGTTCCGTCTCTGCTTTGTAATAAGCATGATCTACTGAAAAAACTGGATGATATAAATTGTTATAGATAATATTGTGCGGATTGTGTAAAAAACTGAGTAATTTATATTGGGAAAAACAGGTCCAGGATGCTCTTCAGTGGCCTATGGTGCATCTGAAGAAATAGGGCCATTCAGGATAAACAAGACGGCTTCGGGACTGTATTTGAATAAGTTTTCATGGAACAAATTGGCAAATTTACTATTCCTTGAAACTCCAGCAGGGGTTGGATTTTCCTACAGCAATAGGTCCTCTGATCTCCTTGACACCGGGGATATTCGCACTGGTACGAACATATTGTTGACTTTGATTAAGCCCTCTCTTTTATCTTGTTGCTAATTAAATTATTTTTTTTCTTAGCTTAGAAATGTCTCAAATCTGAAGACTGATTGACCATGGATTTGTAGTCATATTTGGGGTGCTTATTCTAACTCCTAATGTAGTAAACATGAAAGTGATGGATGCATACCTGCCCCTGAGTAAACGTGACAAATGAACAAGGTTTTTGGATTTAAATGGGTTAATTAATATATCATAACGCAATTCGCTCAATGTGTGACCCGACCTTCTCTCTTTTTCCCTGTTTGGATGGACTTATTTTAAGTGATTTTATGTTTAAATAGCGTTTAACCATTTTTTGTACAGTTTGTGAAAATTCAGGAAAGTATTCTTAAGCTGAATAATTACAAGTTAGTATTTTTAACTTATGACTTATATGCAATAGCCGTTTTTTGCTTATAAGTCATAAGCTATAAGTCTATCCAACCAGTTACATTAATCAAGTCAACGATTACGACTGGATCATAATGCAATCCATTTAAACTTGAACGGATGGAACATGTTAGTAAAACAAATTAATCATATTTGCTTGCTTATTCTCTAATAACTACTAATCTAGTATAAAACTGAAGTGATGGTGGCATGCTTGCTCATGACTTTTCCTCTGTGTAATCAATTGTGTCAAAAGTGCCCATTTTAGGAGCACATGAGAAAGTGCATTTTAGCACTCAATTGCAATGTGGCCTACTTTATGATTTTTGGAGTCAATGCTGCAAGTGTTAGCTACCTTACATGTTGCTATCTGGAGTCAATTTTACTATCACCACTATAGTACTATTCAATCAATCAAACAGCTAAATATTCGCCACTGAAACGAAAATCTTCTCCAAGTAATTGATTTGACTTAATCGTTGAAATATATTATGCGACTTGAGTGCTTGATCATATTAGTACTCTGTTCTGTCTTGTCCTATCGATTTGGAAAAACCTTATCCGCACCTGTTTTTTGCACTAACTTTGTTAATTTATTGTAGTTAAGTGATTAATTCATATGGGTATATACATGATTAATTTGAATGAGATGCTGACTCTTTTGTGTATTTTTATCAGCTAAGGACTCACTTCAGTTCCTTATCCACTGGATGAATCGGTTCCCACGCTACAGAAATCGTGAAGTCTACATCACAGGGGAGAGCTATGCTGGTCATTATGTCCCTCAGCTAGCC</genome_strand>
        <mrna_strand>TAACACTCCCGCCCTTGATGACCTATATCATCACCTCATTGCTATTCACACACAAATAGCAAATTTCTTTATTTCTTTCAGTTTCTCAACAACAATAATATGGCCAAACGAAGATTAGCTTTGCTTTTGATTTTAGCAACAATTGTATGTGTGAGTGCTGCAAAGTTAAACAAATATCAGGATGAAGAAGACGCTGATAGAATAATATCGCTGCCTGGACAACCCAAAGTTTCGTTCCATCAGTACTCAGGGTATGTCACTGTCAATCAGTTTGCTGGAAGAGCTCTATTTTACTGGCTTACTGAAGCTATTGATGAACCACTTACTAAGCCTTTGGTTATTTGGCTTAATGGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAGGATGCTCTTCAGTGGCCTATGGTGCATCTGAAGAAATAGGGCCATTCAGGATAAACAAGACGGCTTCGGGACTGTATTTGAATAAGTTTTCATGGAACAAATTGGCAAATTTACTATTCCTTGAAACTCCAGCAGGGGTTGGATTTTCCTACAGCAATAGGTCCTCTGATCTCCTTGACACCGGGGATATTCGCACTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAGGACTCACTTCAGTTCCTTATCCACTGGATGAATCGGTTCCCACGCTACAGAAATCGTGAAGTCTACATCACAGGGGAGAGCTATGCTGGTCATTATGTCCCTCAGCTAGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E344789" ref_strand="+" ref_description="SGN-E344789 [cTOF-21-H6]">
      <seq>aagattagctttgcttttgattttagcaacaattgtatgtgtgagtgctgcaaagttaaacaaatatcaggatgaagaagacgctgatagaataatatcgctgcctggacaacccaaagtttcgttccatcagtactcagggtatgtcactgtcaatcagtttgctggaagagctctattttactggcttactgaagctattgatgaaccacttactaagcctttggttatttggcttaatgggaggtccaggatgctcttcagtggcctatggtgcatctgaagaaatagggccattcaggataaacaagacggcttcgggactgtatttgaataagttttcatggaacaaattggcaaatttactattccttgaaactccagcaggggttggattttcctacagcaataggtcctctgatctccttgacaccggggatattcgcactgctaaggactcacttcagttccttatccactggatgaatcggntcccacgctacagaaatcgtgaagtctacatcacaggggagagctatgctggtcattatgtccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="9063" stop="4779"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8763" g_stop="8519" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="246" r_length="246" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8518" i_stop="6492" i_length="2027">
            <donor d_prob="0.986" d_score="0.96"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6491" g_stop="6288" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="450" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6287" i_stop="5185" i_length="1103">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5184" g_stop="5079" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="556" r_length="106" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-E344789" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E344789" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8763" e_stop="8519"/>
          <exon e_start="6491" e_stop="6288"/>
          <exon e_start="5184" e_stop="5079"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATTAGCTTTGCTTTTGATTTTAGCAACAATTGTATGTGTGAGTGCTGCAAAGTTAAACAAATATCAGGATGAAGAAGACGCTGATAGAATAATATCGCTGCCTGGACAACCCAAAGTTTCGTTCCATCAGTACTCAGGGTATGTCACTGTCAATCAGTTTGCTGGAAGAGCTCTATTTTACTGGCTTACTGAAGCTATTGATGAACCACTTACTAAGCCTTTGGTTATTTGGCTTAAT-GGAGGTCAGATCTCTCTTAAATTTCTACGTGAAAAGTTCCTTTCTATTTTTTTCTATGTTTGATTTTACTTGTTATATTTCATTTTTAGTGTATGATCGATCGTTAATTTTGATGAAAAAGTAAAAATGGAGGAGATAATAACTATTTTTGGCGCATACGCCCCGTATCCTCAAGGTCTAATGTCTGACACATACATAACTTCTTCGGGAAATGGAACACTAATTATGATTACGTGAACTTCTGGTTACTGTTCTATTCATCCTTCCTTTTCTTCTTTTTCCTGTGACTAAAAAGGACTTAAAAGAAAAGGTTTCTATTTCTTTTAACTATATGTTTCTGTTTAAAACAGCGATTATTCAATTTAGTTGGATTTTAATATGAAACTGAGATCGAGAGAAAAGTCTCACTCGTTATTGATTATGTGTTTTGACTCATACATACATTATGTGTTGTGCATTTAAAAGTCATTTTGTCGGTTAATTATTGAGGGTTTTTAGCTTAGGTATTTGATAGTTGAGTACTGGGAAAGGGGGGGCCGTTTAGTTTAGTCATGACTAAACTGTCGACTGATATGGTTCATTATCCATGAACAGATAAGACATTATCTTTGCCAGTTGCTATTTCTCTCTCTCTCTCTCTTCACATTAATATTTGCACGCAGTGAAAATCAATGCTGTTACAACCAACTCCTCATTTAATTTTTCAACTTCATTTCGTGCCCAGACTGGTCTAACATAGATGCCCACACCAATTACGCTTCCGCAACCACCTTCCCCATGTCAGCTACCTAACAGCCTCCTTAAAAACATATTCGAATTTTAAATTTCATAAGTTCAATCATTACCTCTCAAAACTATTGAATTCAGTTGAACTGTGTGATGCATTGGTTATGGGCATGATGCTCTTCGCACAGGACATAGGTTGGATCTTAATGACGAAGCCAATGATTTAAATAAGGGGATTGGATTCACAGAGTAATATAATTTTTATCTTTTTAAGTGTAAAATTATAGGTATTGAGCCTCACGCCCCCGAAATTTAGCCTGAAGGGAGAAGGATTACCAAGTTTTAAATGAGGTCATCCATGTGAGCCTTTTTAATTCGTTAACATATATTTCACGCCTAATGCTGGGCATCTGGTACAAAATTCGAGGCCCAACATCGAGTAAAATAAGTCATACTCTCTGCTACTTATAAAATTATGTATAGTACGTATTCATATTCCAAAAAAAGATTATACTAGCCTTATAAAGAGGTCCCATCTCATGTATAACTTTTTCATTCTTTTAAGGCAAGGATACTTTAACTAATGGATTTGAACAATTTTAATACATGCAAATAGATAATAGTAATATTTTATACCCTTATTTTCATCACTATTATAGTAATATTTCAACAAAGGAGTTCCGTTGCATCCCTGCCCCTGACCTCAGAAATAAGGTGTCTTCAAATGAGAATAGGAAAGATTCTTTACCGTGAATTATGTTGATAACATTAAATTGTAGCCAACTAAACTTAGTACTGTTTGGGATCTGTCGTCATTTTCTTATAAATGAGGTTTTAATTTCTTGACCATATTGTTCATTATTAGATACATGTGCTCATCTCAACTGTATGTGATAAAGGAGCTAGACACACTCTTCTGCGGGGACCCCTTATATTTTTTTAGTCCTAGTAATTTCTGCTACTACTTCAGATTTCTGGACTGACACTCTGATAAAAATTTTAACCATAGGTGAATTCAAGATGTACATGTGACGTCTTTAAACTTTAAAGTTTTCAATATTTAATTCATTCTACATTTGAAATTCTTCTAATGTAGCTAACCAACTGAGTTACTAAAAAATCATTACTTTAGAGCACCAAAAGCTTGGAATGACGAGAAACTTGAACTCATAAGTTTTAAATTTTAGTTCCGTCTCTGCTTTGTAATAAGCATGATCTACTGAAAAAACTGGATGATATAAATTGTTATAGATAATATTGTGCGGATTGTGTAAAAAACTGAGTAATTTATATTGGGAAAAACAGGTCCAGGATGCTCTTCAGTGGCCTATGGTGCATCTGAAGAAATAGGGCCATTCAGGATAAACAAGACGGCTTCGGGACTGTATTTGAATAAGTTTTCATGGAACAAATTGGCAAATTTACTATTCCTTGAAACTCCAGCAGGGGTTGGATTTTCCTACAGCAATAGGTCCTCTGATCTCCTTGACACCGGGGATATTCGCACTGGTACGAACATATTGTTGACTTTGATTAAGCCCTCTCTTTTATCTTGTTGCTAATTAAATTATTTTTTTTCTTAGCTTAGAAATGTCTCAAATCTGAAGACTGATTGACCATGGATTTGTAGTCATATTTGGGGTGCTTATTCTAACTCCTAATGTAGTAAACATGAAAGTGATGGATGCATACCTGCCCCTGAGTAAACGTGACAAATGAACAAGGTTTTTGGATTTAAATGGGTTAATTAATATATCATAACGCAATTCGCTCAATGTGTGACCCGACCTTCTCTCTTTTTCCCTGTTTGGATGGACTTATTTTAAGTGATTTTATGTTTAAATAGCGTTTAACCATTTTTTGTACAGTTTGTGAAAATTCAGGAAAGTATTCTTAAGCTGAATAATTACAAGTTAGTATTTTTAACTTATGACTTATATGCAATAGCCGTTTTTTGCTTATAAGTCATAAGCTATAAGTCTATCCAACCAGTTACATTAATCAAGTCAACGATTACGACTGGATCATAATGCAATCCATTTAAACTTGAACGGATGGAACATGTTAGTAAAACAAATTAATCATATTTGCTTGCTTATTCTCTAATAACTACTAATCTAGTATAAAACTGAAGTGATGGTGGCATGCTTGCTCATGACTTTTCCTCTGTGTAATCAATTGTGTCAAAAGTGCCCATTTTAGGAGCACATGAGAAAGTGCATTTTAGCACTCAATTGCAATGTGGCCTACTTTATGATTTTTGGAGTCAATGCTGCAAGTGTTAGCTACCTTACATGTTGCTATCTGGAGTCAATTTTACTATCACCACTATAGTACTATTCAATCAATCAAACAGCTAAATATTCGCCACTGAAACGAAAATCTTCTCCAAGTAATTGATTTGACTTAATCGTTGAAATATATTATGCGACTTGAGTGCTTGATCATATTAGTACTCTGTTCTGTCTTGTCCTATCGATTTGGAAAAACCTTATCCGCACCTGTTTTTTGCACTAACTTTGTTAATTTATTGTAGTTAAGTGATTAATTCATATGGGTATATACATGATTAATTTGAATGAGATGCTGACTCTTTTGTGTATTTTTATCAGCTAAGGACTCACTTCAGTTCCTTATCCACTGGATGAATCGGTTCCCACGCTACAGAAATCGTGAAGTCTACATCACAGGGGAGAGCTATGCTGGTCATTATGTCCC</genome_strand>
        <mrna_strand>AAGATTAGCTTTGCTTTTGATTTTAGCAACAATTGTATGTGTGAGTGCTGCAAAGTTAAACAAATATCAGGATGAAGAAGACGCTGATAGAATAATATCGCTGCCTGGACAACCCAAAGTTTCGTTCCATCAGTACTCAGGGTATGTCACTGTCAATCAGTTTGCTGGAAGAGCTCTATTTTACTGGCTTACTGAAGCTATTGATGAACCACTTACTAAGCCTTTGGTTATTTGGCTTAATGGGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAGGATGCTCTTCAGTGGCCTATGGTGCATCTGAAGAAATAGGGCCATTCAGGATAAACAAGACGGCTTCGGGACTGTATTTGAATAAGTTTTCATGGAACAAATTGGCAAATTTACTATTCCTTGAAACTCCAGCAGGGGTTGGATTTTCCTACAGCAATAGGTCCTCTGATCTCCTTGACACCGGGGATATTCGCACTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAGGACTCACTTCAGTTCCTTATCCACTGGATGAATCGGNTCCCACGCTACAGAAATCGTGAAGTCTACATCACAGGGGAGAGCTATGCTGGTCATTATGTCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E243215" ref_strand="+" ref_description="SGN-E243215 [cLEE-2-E2]">
      <seq>ttattgtagatgaccaattttttcttcgaatacgaaattaaattacaatacacacaaaaaaaatatttgaattttttttatttaaactaaggaatgaaagaaaaaaacaaaataagaataagaaactcaaattattataataaaagaagtcaaaaaataatttttgtatgaaaaaattaaaatataccttgaactttgatagaagaatcatatatatccctaaatattttttttaaaaaaaaattagaagtaacaaatataaatttaaaactaattttttaactttcgttaaatgaagggtatatgtgagccattttctaacggcaggggtatatgtgagccgtttgtataacgataagggcatatatgaaccacttttattacgagggatatatcagctctaaatgacaaagttgagaggtatatcagacccttttccctattttttaaaatttcatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="18372" stop="17316"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18072" g_stop="17653" g_length="420"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="420" r_length="420" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-E243215" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>420</cumulative_length_of_scored_exons>
        <coverage percentage="0.913" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E243215" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18072" e_stop="17653"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTGTAGATGACCAATTTTTTTCTTCAAATACGAAATTAAATTACAATACACACAAAAAAATAGTTTAAATTTTTTTTCTTTAAACTAAGGAATGAAAAAGAAAAAACAGAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAAAATTAAAATATACCTTAAACTTTGATAGAAGAATCATATATACCCCTAAATAATTTTTTT--TAAAAAA-TAGAAGTAATAAATATAAATTTTAAACTATTTTTTTAACTTCCGTAAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAGTCGTTTGTATAACGGTAAGGGCATATATGAGCAACTTTTATAACGAGAGGTATATCAGCTCGAAATGACAAAGTTAAGGG</genome_strand>
        <mrna_strand>TTATTGTAGATGACCAA-TTTTTTCTTCGAATACGAAATTAAATTACAATACACACAAAAAAAATATTTGAATTTTTTTTATTTAAACTAAGGAATGAAAGA-AAAAAACAAAATAAGAATAAGAAACTCAAATTATTATAATAAAAGAAGTCAAAAAATAATTTTTGTATG-AAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATATCCCTAAATATTTTTTTTAAAAAAAAATTAGAAGTAACAAATATAAATTTAAAACTAATTTTTTAACTTTCGTTAAATGAAGGGTATATGTGAGCCATTTTCTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGATAAGGGCATATATGAACCACTTTTATTACGAGGGATATATCAGCTCTAAATGACAAAGTTGAGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E393076" ref_strand="+" ref_description="SGN-E393076 [TUS-37-J4]">
      <seq>taaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaataaaaacagaatttatttttttttgtgtatatagcgagatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="20813" stop="21708"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21113" g_stop="21434" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="325" r_length="325" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E393076" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>322</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E393076" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21113" e_stop="21434"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAGATATATG-TTTT-TCTCGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAGCTAGAGAAAATTGTATTTCACTGCAATTGTATAATTCACAATTGTATAATTCGTTGACCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTGTATAATTAAGTGTATAATACAAAGATATACATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAACAGTA-TTATACACTTCTGTGTATAAAGCGAGAGAG</genome_strand>
        <mrna_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATGTTTTTGTCTCGCTTTATACAAAAACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAAAAACAGAATTTATTTTTTTTTGTGTATATAGCGAGATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E393075" ref_strand="+" ref_description="SGN-E393075 [TUS-37-J2]">
      <seq>taaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaatagaaacagaggttttttttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="20813" stop="21702"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21113" g_stop="21418" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="308" r_length="308" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E393075" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>306</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E393075" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21113" e_stop="21418"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAGATATATG-TTTT-TCTCGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAGCTAGAGAAAATTGTATTTCACTGCAATTGTATAATTCACAATTGTATAATTCGTTGACCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTGTATAATTAAGTGTATAATACAAAGATATACATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAACAGTATTATACACTTCTGT</genome_strand>
        <mrna_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATGTTTTTGTCTCGCTTTATACAAAAACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAGAAACAGAGGTTTTTTTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E392727" ref_strand="+" ref_description="SGN-E392727 [TUS-37-J5]">
      <seq>taatatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtcacgctttatacaaaatttaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="20813" stop="21563"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21113" g_stop="21263" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="153" r_length="153" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E392727" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>151</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E392727" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21113" e_stop="21263"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAGATATATG-TTTT-TCTCGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAGCTAGAGAAAATTGTATTTCACTGCAATTGTATAATTCACAATT</genome_strand>
        <mrna_strand>TAATATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATGTTTTTGTCACGCTTTATACAAAATTTAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E200845" ref_strand="+" ref_description="SGN-E200845 [cLEC-5-G3]">
      <seq>aaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaatagaaacagaatttatacacttctgtgtatatagcgagataggcgagcgagaatggagagtggcgagcgagatttttgggagggagacgcctgacaaactttagctaacgtttgctatggagcacaattaaatcaaactctagctactccatttagttagattactag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="20814" stop="21860"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21114" g_stop="21560" g_length="447"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="450" r_length="450" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E200845" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E200845" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21114" e_stop="21560"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAGATATATG-TTTT-TCTCGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAGCTAGAGAAAATTGTATTTCACTGCAATTGTATAATTCACAATTGTATAATTCGTTGACCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTGTATAATTAAGTGTATAATACAAAGATATACATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAACAGTA-TTATACACTTCTGTGTATAAAGCGAGAGAGGCGAGCGAGAATGGAGAGTGGCGAGCGAGATTTTTGGGAGCGAGACG-CTGACAAATTTTAGCTAATGTTTGCTATGGAGCACTTTTAAATCAAACCCTAGCTATTTCATTTATTTTAGGTTATTAG</genome_strand>
        <mrna_strand>AAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATGTTTTTGTCTCGCTTTATACAAAAACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAGAAACAGAATTTATACACTTCTGTGTATATAGCGAGATAGGCGAGCGAGAATGGAGAGTGGCGAGCGAGATTTTTGGGAGGGAGACGCCTGACAAACTTTAGCTAACGTTTGCTATGGAGCACAATTAAATCAAACTCTAGCTACTCCATTTA-GTTAGATTACTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E364958" ref_strand="+" ref_description="SGN-E364958 [cLPP-17-C18]">
      <seq>ggaaactaaaatggagagtcctcgtatgcaagaaaagatcattgaatcggagaatcatgaaaataacatcaaagtaaagaagacatctaatgtcgatgaagttcaacattctccctcagcgctcaacaagtcagatgaatttctacattctgcctcaacgctcaacaagtcagatggtaaagcagtttctcagtttgaggcaagttatgcttcctcgccccgactctccaatgagagtggaaacagcagcagctcctttgcttttccattactactaaacgatgctgggaaaactggctcactcaaagctccctctgcgaaaatggagagacctcaacctcaacctcagcctcagcatcagccgcagccacaaacacaaccacaaccacaaccacaacccaagtatgaaccagattcagaaccagaaatgcagccacaatcacccgcacaatcacagtcatacacgaagtcagagtcaaaacaagcagagtcactgcctaaactgggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="22980" stop="24457"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23279" g_stop="23548" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="270" r_length="270" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23549" i_stop="23912" i_length="364">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23913" g_stop="24157" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="509" r_length="239" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E364958" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="1.012" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E364958" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23279" e_stop="23548"/>
          <exon e_start="23913" e_stop="24157"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAACTAAAATGGAGAGTCCTCGTATGCAAGAAAAGATCATTGAATCGGAGAATCATGAAAATAACATCAAAGTAAACAAGACATCTAATGTCGATGAAGTTCAACATTCTCCCTCAGCGCTCAACAAGTCAGATGAATTACTACATTCTGCCTCAACGCTCAACAAGTCAGATGGTAAAGCAGTTTCTCAGTTTGAGGCAAGTTATGCTTCCTCGCCCCGCCTCTCCAATGAGAGTGGAAACAGCAGCAGCTCCTTTGCTTTTCCATTGTAAGATCTCCTTTTCACAACTACCATATACAATGCACTATGTTTTCCCTTTCTTTTTGTTCTGGTTTGCTTTTCCACTCGTGGGATTACACTGGATATGTTGTATGCACAAGTTAATCTCTTTCATGATCCATGCGTTTACTTGCTTGATCATTCATGCGTTTACAAGGTATAAGGGTTAACATTCCTCGTTTTGTGAATGGAGTGTCGATGAGAGAAGCAAAATATCAAATAACACAAGCTAGTAGTTTTAGTTAGTATCTATCTTCTTCTTGTTTTTCTCGGGTGAAGTCTGTTGTGCTGCTAGTTTGTTCCATGCATGATTACACTTGGATTGTTTATAATCGCTTTTGGTTTGTTGCAGACTACTAAACGATGCTGGGAAAACTGGCTCACTCAAAGCTCCCTCTGCGAAAATGGAGAGACCTCAACCTCAGCCTCAGCATCAGCATCAGCCACAGCCACATCCACATCCACAGCCACAACCACAACCACAACCCAAGTATGAACCAGATTCAGAACCACAAATGCAGCCACAATCACCGCAACAATCAGAGTCATACACGAAATCAGAGTCAAAACAAGCAGAGTCACTGCCAAAACTGGGAG</genome_strand>
        <mrna_strand>GGAAACTAAAATGGAGAGTCCTCGTATGCAAGAAAAGATCATTGAATCGGAGAATCATGAAAATAACATCAAAGTAAAGAAGACATCTAATGTCGATGAAGTTCAACATTCTCCCTCAGCGCTCAACAAGTCAGATGAATTTCTACATTCTGCCTCAACGCTCAACAAGTCAGATGGTAAAGCAGTTTCTCAGTTTGAGGCAAGTTATGCTTCCTCGCCCCGACTCTCCAATGAGAGTGGAAACAGCAGCAGCTCCTTTGCTTTTCCATT............................................................................................................................................................................................................................................................................................................................................................................ACTACTAAACGATGCTGGGAAAACTGGCTCACTCAAAGCTCCCTCTGCGAAAATGGAGAGACCTCAACCTCAACCTCAGCCTCAGCATCAGCCGCAGCCACA---A-A--CACAACCACAACCACAACCACAACCCAAGTATGAACCAGATTCAGAACCAGAAATGCAGCCACAATCACCCGCACAATCACAGTCATACACGAAGTCAGAGTCAAAACAAGCAGAGTCACTGCCTAAACTGGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E745785" ref_strand="+" ref_description="SGN-E745785 [GI|47105085]">
      <seq>ggttgttacaaatcaggttaatggcagcagagtgagagagaaccctcgcggcgttatagtcgatggccggagacaaattgaaggcgggtcttcctggcggaaaagcggcggaaccgcagtaccaggcggcgaaaacatcggtgtggtgggatatagagaattgtcaggtgcccaggggatgcgacgctcatgcaattgctcagaatataaacgctgcattgatgaagatgaactataatggaccagtcgctatttccgcctatggagacacaaatcgtattccctcgtacattcaacgagccctttctagtactggaatcagtctcaatcacgtcccggccggggctaaggatgctagtgataagaaaatattggtggatatgctattttgggcagtggacaatcctgcacctgccaattatttgctcatttcaggagacagggatttctccaatgccattcatcagttacggatgaggagatataatattcttctagcacagccttttaaggcttctcctgctcttgctgctgctgccacaaatgtgtggcaatggataagccttgctgctggagaatctccacgagaacttacttttggtactaacacatcacatcaagaatctataccgactccagtttatgaacctatatcagcaaaccaacctgcatattctaatgccaataccaatatcaataccaacgccaataatgccaatgccaactccaactccaacgccaaagccaaatccaaagccaatgccaatgccaatgccaacgccaatatcaataccaatatcaataccagtgccaacgccaatatcaataccaatagcaatgccaatgccaatgccaatgccaataccaataccacaaccaatgctaatgctaatactaaaactaaagttatttacgtaccaaagaactcaaatcaactgactatgaccggtaggtcaagtatgccagctagaattgaagaaactagtagcagctatcgcccacacgcaccagctgttgcaccagtgcagtttgcaccacatatatttttcgcaaagtctgatagttcagagaaccataacagtaaattcatagaaaacaagcctgctcagcgtactcaatctcagcctcctcttgttcgagataactttgtgaagaaattcaacttccgccagaagaatttgcaaccttcgcttcaacgacctgaaggtaggggtgatttatgtggttctatgaacaagggtgatgtatgtcctgagttttccttccttccatcctcatcgggtgcttctaaatctgtctctggtaattcaaatttggaactccagctgcctgaactcattcaaggtcttataggggtcatccttctttcgttggacagtttgaagctcgagaagattgtgcctaccaaagaaaacatcggttattgtctacgttatggtaaccctaaatatcgtcatattgatgtcacagtagcattaaatgctgcactagagcaacagatgatagtaaagttaaaacaagctgatattgaactatatgttggtagaaatgagaggatttggaaatgtgagaatccacttggtggcaatcctaaccaatatcacaatgcaacttggaacgtgattgagaaatttctttgttcaactgttggacgttcagcaatagcagcatctgaatgcaggtatgaagctgctttgattcttagaaatgcatgccttaaagaccttacattgggtgaagtacttcaaatcctgaatatgattatcactctgaagcgttggattaaaactcgctctgattggcatcagattactattactcttccagaaactaataatgacaatgataccagaacatgcatctagccgacagatctcttttggtattttagcatgtcatagccgtgacatgttttcagaaatggatttgatatcttgggagttacagattttaaaagaagctcaattttgtataagatggtatgttcagtgcttacttgatgacggcataggagcgagatcttttttacttttgtggacctctttccaagacacttgcagctgatataagtgtgcagctaaagggatgtgattgttatcatgcttctatcaaccttgctatgctgatggatctcgtaatcttacatttacagcagcatcgtttctgctatcttcactttctttatcttaaaatttccttttcgctggaaattttgtttgcatcagcaagtctactactgctttcacattacttggatttggggcatccaggaatatgcagattgtattttggttaccttggtgagttgagaactggccagaagcacaaaggttttgggttgcaggttgacaggaatattttgtagtcactgttcttctagccagaatataaataatgaaaagtggtttagaacagatccagtaaccttgttttttaagctttatcaaatggaatatgtagatttacttcaccagcgtttttgataacgttctccttttgcctattctttttgtttcttggaacttatgactgtaaatcacttctgcagataagattatatgtagctttaattggagaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="28214" stop="24290"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27915" g_stop="27574" g_length="342"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="342" r_length="342" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27573" i_stop="27087" i_length="487">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27086" g_stop="26223" g_length="864"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="1206" r_length="864" r_score="0.999"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26222" i_stop="26032" i_length="191">
            <donor d_prob="0.616" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26031" g_stop="25557" g_length="475"/>
          <reference_exon_boundary r_type="cDNA" r_start="1207" r_stop="1681" r_length="475" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25556" i_stop="25486" i_length="71">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25485" g_stop="24593" g_length="893"/>
          <reference_exon_boundary r_type="cDNA" r_start="1682" r_stop="2574" r_length="893" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2575" polyA_stop="2592"/>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-E745785" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2574</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E745785" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27915" e_stop="27574"/>
          <exon e_start="27086" e_stop="26223"/>
          <exon e_start="26031" e_stop="25557"/>
          <exon e_start="25485" e_stop="24593"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTGTTACAAATCAGGTTAATGGCAGCAGAGTGAGAGAGAACCCTCGCGGCGTTATAGTCGATGGCCGGAGACAAATTGAAGGCGGGTCTTCCTGGCGGAAAAGCGGCGGAACCGCAGTACCAGGCGGCGAAAACATCGGTGTGGTGGGATATAGAGAATTGTCAGGTGCCCAGGGGATGCGACGCTCATGCAATTGCTCAGAATATAAACGCTGCATTGATGAAGATGAACTATAATGGACCAGTCGCTATTTCCGCCTATGGAGACACAAATCGTATTCCCTCGTACATTCAACGAGCCCTTTCTAGTACTGGAATCAGTCTCAATCACGTCCCGGCCGGTACACTAGCAAACCTTCTTCTATTTCCTTTTAACGTTTTAATCTTGTTTTTCATTGTTCAAAATAATTTTCTCAGAGTATAGAGAGGATTTTCAAAGGTTTCTCCCCCCTCCTCTAAGAAATTTAATGGCTGGCCCTAACAGCTTAATCTTGTTTTTCTTTGAAACCTTTGTTGAAAGTGATTTTCTTGAGCAATGGGGGTTTATTAGAAATTTAGTAGCTAGCCTAACAGCTTAATCTTGCTTGGGATTGGTAATTGGTAATTGTTGATGACATTTTCATTATTCGAATTTGAAACAGTTCATCCCATAAGAGTTCTTGGTTTCCAAAATAAATGAATATCAACTTCTAATTCCTTCTTCATATAGTTTTTATGTTTTAGGTTTTGGAAGATATAATATTCATGAACCTATTAATAACTCTTACTTAATGGAAACTTTTATCTTTTACTAATTAAATTCATGCATTTAATTTGTTTGATTTACAGGGGCTAAGGATGCTAGTGATAAGAAAATATTGGTGGATATGCTATTTTGGGCAGTGGACAATCCTGCACCTGCCAATTATTTGCTCATTTCAGGAGACAGGGATTTCTCCAATGCCATTCATCAGTTACGGATGAGGAGATATAATATTCTTCTAGCACAGCCTTTTAAGGCTTCTCCTGCTCTTGCTGCTGCTGCCACAAATGTGTGGCAATGGATAAGCCTTGCTGCTGGAGAATCTCCACGAGAACTTACTTTTGGTACTAACACATTACATCAAGAATCTATACCGACTCCAGTTTATGAACCTATATCAGCAAACCAACCTGCATATTCTAATGCCAATACCAATATCAATACCAACGCCAATAATGCCAATGCCAACTCCAACTCCAACGCCAAAGCCAAATCCAAAGCCAATGCCAATGCCAATGCCAACGCCAATATCAATACCAATATCAATACCAGTGCCAACGCCAATATCAATACCAATAGCAATGCCAATGCCAATGCCAATGCCAATACCAATACCACAACCAATGCTAATGCTAATACTAAAACTAAAGTTATTTACGTACCAAAGAACTCAAATCAACTGACTATGACCGGTAGGTCAAGTATGCCAGCTAGAATTGAAGAAACTAGTAGCAGCTATCGCCCACACGCACCAGCTGTTGCACCAGTGCAGTTTGCACCACATATATTTTTCGCAAAGTCTGATAGTTCAGAGAACCATAACAGTAAATTCATAGAAAACAAGCCTGCTCAGCGTACTCAATCTCAGCCTCCTCTTGTTCGAGATAACTTTGTGAAGAAATTCAACTTCCGCCAGAAGAATTTGCAACCTTCGCTTCAACGACCTGAAGGTTCTGCTGATTTTTCTACACTATTTGTACATCATCCTAATCCTGGCATGCATAATTTGTCTGATAGACCCATAAACTTGTATTACACTCCTAATTTGGATTGACAAAATTGGGAAGTATTGTGACCGAAGCTGAAGTTCACTAAGTCATATAATTTTCTTGTGACACTAATGGTGGTAGTTGTATTGCAGGTAGGGGTGATTTATGTGGTTCTATGAACAAGGGTGATGTATGTCCTGAGTTTTCCTTCCTTCCATCCTCATCGGGTGCTTCTAAATCTGTCTCTGGTAATTCAAATTTGGAACTCCAGCTGCCTGAACTCATTCAAGGTCTTATAGGGGTCATCCTTCTTTCGTTGGACAGTTTGAAGCTCGAGAAGATTGTGCCTACCAAAGAAAACATCGGTTATTGTCTACGTTATGGTAACCCTAAATATCGTCATATTGATGTCACAGTAGCATTAAATGCTGCACTAGAGCAACAGATGATAGTAAAGTTAAAACAAGCTGATATTGAACTATATGTTGGTAGAAATGAGAGGATTTGGAAATGTGAGAATCCACTTGGTGGCAATCCTAACCAATATCACAATGCAACTTGGAACGTGATTGAGAAATTTCTTTGTTCAACTGTTGGACGTTCAGCAATAGCAGCATCTGAATGCAGGTAAACAATTTGTGCTGCATGTTTTTTAATTATATTCTGTTTTTTTTCCTCATGTTCTGTCTGCCTTCCAGGTATGAAGCTGCTTTGATTCTTAGAAATGCATGCCTTAAAGACCTTACATTGGGTGAAGTACTTCAAATCCTGAATATGATTATCACTCTGAAGCGTTGGATTAAAACTCGCTCTGATTGGCATCAGATTACTATTACTCTTCCAGAAACTAATAATGACAATGATACCAGAACATGCATCTAGCCGACAGATCTCTTTTGGTATTTTAGCATGTCATAGCCGTGACATGTTTTCAGAAATGGATTTGATATCTTGGGAGTTACAGATTTTAAAAGAAGCTCAATTTTGTATAAGATGGTATGTTCAGTGCTTACTTGATGACGGCATAGGAGCGAGATCTTTTTTACTTTTGTGGACCTCTTTCCAAGACACTTGCAGCTGATATAAGTGTGCAGCTAAAGGGATGTGATTGTTATCATGCTTCTATCAACCTTGCTATGCTGATGGATCTCGTAATCTTACATTTACAGCAGCATCGTTTCTGCTATCTTCACTTTCTTTATCTTAAAATTTCCTTTTCGCTGGAAATTTTGTTTGCATCAGCAAGTCTACTACTGCTTTCACATTACTTGGATTTGGGGCATCCAGGAATATGCAGATTGTATTTTGGTTACCTTGGTGAGTTGAGAACTGGCCAGAAGCACAAAGGTTTTGGGTTGCAGGTTGACAGGAATATTTTGTAGTCACTGTTCTTCTAGCCAGAATATAAATAATGAAAAGTGGTTTAGAACAGATCCAGTAACCTTGTTTTTTAAGCTTTATCAAATGGAATATGTAGATTTACTTCACCAGCGTTTTTGATAACGTTGTCCTTTTGCCTATTCTTTTTGTTTCTTGGAACTTATGACTGTAAATCACTTCTGCAGATAAGATTATATGTAGCTTTAATTGG</genome_strand>
        <mrna_strand>GGTTGTTACAAATCAGGTTAATGGCAGCAGAGTGAGAGAGAACCCTCGCGGCGTTATAGTCGATGGCCGGAGACAAATTGAAGGCGGGTCTTCCTGGCGGAAAAGCGGCGGAACCGCAGTACCAGGCGGCGAAAACATCGGTGTGGTGGGATATAGAGAATTGTCAGGTGCCCAGGGGATGCGACGCTCATGCAATTGCTCAGAATATAAACGCTGCATTGATGAAGATGAACTATAATGGACCAGTCGCTATTTCCGCCTATGGAGACACAAATCGTATTCCCTCGTACATTCAACGAGCCCTTTCTAGTACTGGAATCAGTCTCAATCACGTCCCGGCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCTAAGGATGCTAGTGATAAGAAAATATTGGTGGATATGCTATTTTGGGCAGTGGACAATCCTGCACCTGCCAATTATTTGCTCATTTCAGGAGACAGGGATTTCTCCAATGCCATTCATCAGTTACGGATGAGGAGATATAATATTCTTCTAGCACAGCCTTTTAAGGCTTCTCCTGCTCTTGCTGCTGCTGCCACAAATGTGTGGCAATGGATAAGCCTTGCTGCTGGAGAATCTCCACGAGAACTTACTTTTGGTACTAACACATCACATCAAGAATCTATACCGACTCCAGTTTATGAACCTATATCAGCAAACCAACCTGCATATTCTAATGCCAATACCAATATCAATACCAACGCCAATAATGCCAATGCCAACTCCAACTCCAACGCCAAAGCCAAATCCAAAGCCAATGCCAATGCCAATGCCAACGCCAATATCAATACCAATATCAATACCAGTGCCAACGCCAATATCAATACCAATAGCAATGCCAATGCCAATGCCAATGCCAATACCAATACCACAACCAATGCTAATGCTAATACTAAAACTAAAGTTATTTACGTACCAAAGAACTCAAATCAACTGACTATGACCGGTAGGTCAAGTATGCCAGCTAGAATTGAAGAAACTAGTAGCAGCTATCGCCCACACGCACCAGCTGTTGCACCAGTGCAGTTTGCACCACATATATTTTTCGCAAAGTCTGATAGTTCAGAGAACCATAACAGTAAATTCATAGAAAACAAGCCTGCTCAGCGTACTCAATCTCAGCCTCCTCTTGTTCGAGATAACTTTGTGAAGAAATTCAACTTCCGCCAGAAGAATTTGCAACCTTCGCTTCAACGACCTGAAG...............................................................................................................................................................................................GTAGGGGTGATTTATGTGGTTCTATGAACAAGGGTGATGTATGTCCTGAGTTTTCCTTCCTTCCATCCTCATCGGGTGCTTCTAAATCTGTCTCTGGTAATTCAAATTTGGAACTCCAGCTGCCTGAACTCATTCAAGGTCTTATAGGGGTCATCCTTCTTTCGTTGGACAGTTTGAAGCTCGAGAAGATTGTGCCTACCAAAGAAAACATCGGTTATTGTCTACGTTATGGTAACCCTAAATATCGTCATATTGATGTCACAGTAGCATTAAATGCTGCACTAGAGCAACAGATGATAGTAAAGTTAAAACAAGCTGATATTGAACTATATGTTGGTAGAAATGAGAGGATTTGGAAATGTGAGAATCCACTTGGTGGCAATCCTAACCAATATCACAATGCAACTTGGAACGTGATTGAGAAATTTCTTTGTTCAACTGTTGGACGTTCAGCAATAGCAGCATCTGAATGCAG.......................................................................GTATGAAGCTGCTTTGATTCTTAGAAATGCATGCCTTAAAGACCTTACATTGGGTGAAGTACTTCAAATCCTGAATATGATTATCACTCTGAAGCGTTGGATTAAAACTCGCTCTGATTGGCATCAGATTACTATTACTCTTCCAGAAACTAATAATGACAATGATACCAGAACATGCATCTAGCCGACAGATCTCTTTTGGTATTTTAGCATGTCATAGCCGTGACATGTTTTCAGAAATGGATTTGATATCTTGGGAGTTACAGATTTTAAAAGAAGCTCAATTTTGTATAAGATGGTATGTTCAGTGCTTACTTGATGACGGCATAGGAGCGAGATCTTTTTTACTTTTGTGGACCTCTTTCCAAGACACTTGCAGCTGATATAAGTGTGCAGCTAAAGGGATGTGATTGTTATCATGCTTCTATCAACCTTGCTATGCTGATGGATCTCGTAATCTTACATTTACAGCAGCATCGTTTCTGCTATCTTCACTTTCTTTATCTTAAAATTTCCTTTTCGCTGGAAATTTTGTTTGCATCAGCAAGTCTACTACTGCTTTCACATTACTTGGATTTGGGGCATCCAGGAATATGCAGATTGTATTTTGGTTACCTTGGTGAGTTGAGAACTGGCCAGAAGCACAAAGGTTTTGGGTTGCAGGTTGACAGGAATATTTTGTAGTCACTGTTCTTCTAGCCAGAATATAAATAATGAAAAGTGGTTTAGAACAGATCCAGTAACCTTGTTTTTTAAGCTTTATCAAATGGAATATGTAGATTTACTTCACCAGCGTTTTTGATAACGTTCTCCTTTTGCCTATTCTTTTTGTTTCTTGGAACTTATGACTGTAAATCACTTCTGCAGATAAGATTATATGTAGCTTTAATTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E319273" ref_strand="+" ref_description="SGN-E319273 [cTOB-16-G12]">
      <seq>attgtgcctaccaaagaaaagatcggtgggtgttttcgttatggtaaccctaaatctcgttatattgatgtcacagtagcattaaatgctgcactagagcaacagatgatagtaaagtgaaaacaagctggtgttgaactatatcttggtagaaatgagaggatttggaaatgtgagaatccacttggtggcaatcctaaccaatatcacaatgcaacttggaacgtgattgagaaatttctttgttcaactgttggacgttcagcaatagcaacatctgaatgcaggtatgaagctgctttgattcttagaaatgcatgccttaaagaccttacattgggtgaagttctttaaattctgaacatgattatcactctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="26143" stop="25094"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25843" g_stop="25557" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="287" r_length="287" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25556" i_stop="25486" i_length="71">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25485" g_stop="25394" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="379" r_length="92" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-E319273" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>379</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E319273" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25843" e_stop="25557"/>
          <exon e_start="25485" e_stop="25394"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGTGCCTACCAAAGAAAACATCGGTTATTGTCTACGTTATGGTAACCCTAAATATCGTCATATTGATGTCACAGTAGCATTAAATGCTGCACTAGAGCAACAGATGATAGTAAAGTTAAAACAAGCTGATATTGAACTATATGTTGGTAGAAATGAGAGGATTTGGAAATGTGAGAATCCACTTGGTGGCAATCCTAACCAATATCACAATGCAACTTGGAACGTGATTGAGAAATTTCTTTGTTCAACTGTTGGACGTTCAGCAATAGCAGCATCTGAATGCAGGTAAACAATTTGTGCTGCATGTTTTTTAATTATATTCTGTTTTTTTTCCTCATGTTCTGTCTGCCTTCCAGGTATGAAGCTGCTTTGATTCTTAGAAATGCATGCCTTAAAGACCTTACATTGGGTGAAGTACTTCAAATCCTGAATATGATTATCACTCTGA</genome_strand>
        <mrna_strand>ATTGTGCCTACCAAAGAAAAGATCGGTGGGTGTTTTCGTTATGGTAACCCTAAATCTCGTTATATTGATGTCACAGTAGCATTAAATGCTGCACTAGAGCAACAGATGATAGTAAAGTGAAAACAAGCTGGTGTTGAACTATATCTTGGTAGAAATGAGAGGATTTGGAAATGTGAGAATCCACTTGGTGGCAATCCTAACCAATATCACAATGCAACTTGGAACGTGATTGAGAAATTTCTTTGTTCAACTGTTGGACGTTCAGCAATAGCAACATCTGAATGCAG.......................................................................GTATGAAGCTGCTTTGATTCTTAGAAATGCATGCCTTAAAGACCTTACATTGGGTGAAGTTCTTTAAATTCTGAACATGATTATCACTCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E346438" ref_strand="+" ref_description="SGN-E346438 [cTOF-23-D9]">
      <seq>tccttcacctctgttgagatgatgccagtggaactctataatgacacagaaaaggggcaaagcttcaagaattcagctttgctatcatcgttcatcttcttttgtaacatggaccaaggttctttttttattttcgagtagatagtagtttcttgcgggatattgcataatcaatgggcaagtttatcccctttctgtggggaaaaaaaatttaagaattcccattggcatttatctttcagttattcgttatttggaagtccgcattaatttttcgtacatgaagggactgtagagtgcagttggttccatatcggtttcaacacgaaatgtgacttttgaaggggtggtattatcagcaaagtctaacaagcttgaccagcctttgctcttaactgttgcagtttcatggcgttaaagagtcgtcggattacttgaaaattttcttagtgctcttctctcttcaatgcggcctttgtttctaacgataacgttagtaattccatgtaaaatatattagttaacaatgatttttttgttcgcttcaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="62336" stop="61189"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62036" g_stop="61489" g_length="548"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="549" r_length="549" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61488" i_stop="61367" i_length="122">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.761" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="61366" g_stop="61354" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="550" r_stop="562" r_length="13" r_score="0.692"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-E346438" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>561</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E346438" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62036" e_stop="61489"/>
          <exon e_start="61366" e_stop="61354"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTTCACCTCTGTTGAGATGATGCCAGTGGAACTCTATAATGACACAGAAAAGGGGCAAAGCTTCAAGAATTCAGCTTTGCTATCATCGTTCATCTTCTTTTGTAACATGGACCAAGGTTCTTTTTTTATTTTCGAGTAGATAGTAGTTTCTTGCGGGATATTGCATAATCAATGGGCAAGTTTATCCCCTTTCTGTGGGGAAAAAAAATTTAAGAATTCCCATTGGCATTTATCTTTCAGTTATTCGTTATTTGGAAGTCCGCATTAATTTTTCGTACATGAAGGGACTGTAGAGTGCAGTTGGTTCCATATCGGTTTCAACACGAAATGTGACTTTTGAAGGGGTGGTATTATCAGCAAAGTCTAACAAGCTTGACCAGCCTTTGCTCTTAACTGTTGCAGTTTCATGGCGTTAAAGAGTCGTCGGATTACTTGAAAATTTTCTTAGTGCTCTTCTCTCTTCAATGCGGCCTTTGTTTCTAACGATAACGTTAGTAATTCCATGTAAAATATATTAGTTAACAATGA-TTTTTTGTTCGCTTCAAATTTTTTCATGTTTTTTCTAAATGCCAATGTATCCTTTTTGAACTCAAAATGAACATATATTTTTAATCTTTTTGACTTATAAATTCTTTAAAATGGAACAAATTTGTGGGACTTGTTACCAGAAAACATACAAAT</genome_strand>
        <mrna_strand>TCCTTCACCTCTGTTGAGATGATGCCAGTGGAACTCTATAATGACACAGAAAAGGGGCAAAGCTTCAAGAATTCAGCTTTGCTATCATCGTTCATCTTCTTTTGTAACATGGACCAAGGTTCTTTTTTTATTTTCGAGTAGATAGTAGTTTCTTGCGGGATATTGCATAATCAATGGGCAAGTTTATCCCCTTTCTGTGGGGAAAAAAAATTTAAGAATTCCCATTGGCATTTATCTTTCAGTTATTCGTTATTTGGAAGTCCGCATTAATTTTTCGTACATGAAGGGACTGTAGAGTGCAGTTGGTTCCATATCGGTTTCAACACGAAATGTGACTTTTGAAGGGGTGGTATTATCAGCAAAGTCTAACAAGCTTGACCAGCCTTTGCTCTTAACTGTTGCAGTTTCATGGCGTTAAAGAGTCGTCGGATTACTTGAAAATTTTCTTAGTGCTCTTCTCTCTTCAATGCGGCCTTTGTTTCTAACGATAACGTTAGTAATTCCATGTAAAATATATTAGTTAACAATGATTTTTTTGTTCGCTTCAAA..........................................................................................................................AAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E577604" ref_strand="-" ref_description="SGN-E577604 [LE15AF03]">
      <seq>cagtggaaattcattgcctctgtcacaagggtctatgcttctcagggaagtgttcttcaggaatttctgattttgggagtcaacccattcaagggccaggtgacaacagtactggggcaaatactccgactagcatcaagccttcagagcaagaacatgaacagaaacaggttgccaaaccacctaaaatcacaagcgaaaaaccacctaccacatgtaatggaagtgccagcaaggaagcgaaagaaatgttcaaaaactacatgctcaacatgccctgtgtttccacaatgggcaaggggccaaatggtaagaagattgaaggatttctgtacagatatcagaagggagaggaagtaaaaataatgtgtgtttgtcatggtaactttctctccccagctgagtttgtgaaacatgctggtggcggtgatgttgcaaatccgttgaagcaaattgtcgtcaatccttcacctctgttgagatgatgccagtggaactctataatgacacagaaaaggggcaaagcttcaagaattcagctttgctatcatcgttcatcttcttttgtaacatggaccaaggttctttttttattttcgagtagatagtagtttcttgcgggatattgcataatcaatgggcaagtttatcccctttctgtgggaaaaaaaaatttaagaattcccattggcatttatctttcagttattcgttatttggaagtccgcattaatttttcgtacatgaagggactgtagagtgcagttggttccatatcggtttcaacacgaaatgtgactttgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="64142" stop="61394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63842" g_stop="63747" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63746" i_stop="62407" i_length="1340">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62406" g_stop="61698" g_length="709"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="802" r_length="709" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="804" polyA_stop="814"/>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-E577604" ref_strand="-">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>805</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E577604" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="63842" e_stop="63747"/>
          <exon e_start="62406" e_stop="61698"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTTGGAAATTCATTGCCTCTGTCACAAGGGTCTATGGCTTCTCAGGGAAGTGGTTCTTCAGGAATTTCTGATTTTGGGAGTCAACCCATTCAAGGTATTATTCTCGTTCATTAAATTTTTTTATCTTTACGGGCGATTTGGCCTTAGAATTCTCGGATTTATAGTGGTTAAGGTATTTATTTGCCTATTCTATTACTATCTTCCTATCGGGGGAGTTCTTATGTTCCTCATTAGAGTAAAGATAATTCTTTTACTACTCTTCGTTAGGGATCTTGTAAATATAGATTTTCAAGAAGAATCTTGTTCTTTAATAAATATAGTGTCTTGGTTATGGGCGATGTGCGCTAAAAATTATTATCCCACAACCATTTTGTTCAGAAAAGGGGAGAAATAAAATTTCCATACTTTAGGTTTCTATTATAGAGGAAGTGAGATGGACGTTGCCAAAGGAATAAAGATTAAGACATCTACCTGCACCTGGAGTCGTGGACTTCTTTAGGAACTTTCCTGTTGTTTACCTGAATTCACTGTCCACCCTTAATGTTGTGGTATTCACTGCAAATTTCCCCTCTTTCACCTTCTAATATCTGATATTCTTTGAACTGATCGGACATGCCGATTTTTCCAAGAGTGTTTTACATGTGGACTTACTGGGCGGTATCACTTGTTTCCGGGGGAGGGGGGTAAGAAATCCTTGAGGCTAATTCTTTCTTTTTTCCAGGAAGGTAGGAGTTTTTTTTTTAATCTAATGATAACTTCGGTTAAATAATTGTGCACTTATTGAAGCTTGGACCAAGTGTAGCAACTTTATATTAACTAAACGAATACACAATCTTAAAATTCTGGATCTGCCACTGCCGTGGTATGTTACCGTAGTAGAATTTGAGCGTCCTTTGTTTGGCTGACAATGTTTTAGCAGAATCTTATTTCTTCTTAGTCACTGTACGTTCTCAGAAGTTGTCTGCAGAGGAATCTTATTGCCTTTGATTAGCTTTGCCTGGTCCTGTCTCTTTGGGTGGAGTTTTATTGCCTATGTCGTAGAGATTTTGACCCCTCCTGCAACGCTGTATGTTCCAATTCAAAACAGCTACTGCTTGCAGTGGAGTTATATTGCCTATAGGTCCTTCGAGAGGGGTTGTAGTAAGATTTTACCCCCCCCCCCCCCTCTATCACTGTTTTTCCAACTCAAAGTAGCAACTAGTTCAAGTGGTGAACGTATGTGCTTTCTCTTGATGCTCTAGCGTGATGTTCTGCACGTGATCTCTCTAACACAATGTTTTTACCGCCGTTAAGACTTGAAGTAAGCTTTGATTTCTGTATCAAGCCATCTGTCCTTGCAGGTGGTTGATAGACAGATTCTCTTCACCGTCTCTCTCTTGCACATAGATTCCTGACGGGAAGAGCTGACCTATTTTCAATCTTAAACTATTGCAGGGCCAGGTGACAACAGTACTGGGGCAAATACTCCGACTAGCATCAAGCCTTCAGAGCAAGAACATGAACAGAAACAGGTTGCCAAACCACCTAAAATCACAAGCGAAAAACCACCTACCACATGTAATGGAAGTGCCAGCAAGGAAGCGAAAGAAATGTTCAAAAACTACATGCTCAACATGCCCTGTGTTTCCACAATGGGCAAGGGGCCAAATGGTAAGAAGATTGAAGGATTTCTGTACAGATATCAGAAGGGAGAGGAAGTAAAAATAATGTGTGTTTGTCATGGTAACTTTCTCTCCCCAGCTGAGTTTGTGAAACATGCTGGTGGCGGTGATGTTGCAAATCCGTTGAAGCAAATTGTCGTCAATCCTTCACCTCTGTTGAGATGATGCCAGTGGAACTCTATAATGACACAGAAAAGGGGCAAAGCTTCAAGAATTCAGCTTTGCTATCATCGTTCATCTTCTTTTGTAACATGGACCAAGGTTCTTTTTTTATTTTCGAGTAGATAGTAGTTTCTTGCGGGATATTGCATAATCAATGGGCAAGTTTATCCCCTTTCTGTGGGGAAAAAAAATTTAAGAATTCCCATTGGCATTTATCTTTCAGTTATTCGTTATTTGGAAGTCCGCATTAATTTTTCGTACATGAAGGGACTGTAGAGTGCAGTTGGTTCCATATCGGTTTCAACACGAAATGTGACTTT</genome_strand>
        <mrna_strand>CAGT-GGAAATTCATTGCCTCTGTCACAAGGGTCTAT-GCTTCTCAGGGAAGT-GTTCTTCAGGAATTTCTGATTTTGGGAGTCAACCCATTCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAGGTGACAACAGTACTGGGGCAAATACTCCGACTAGCATCAAGCCTTCAGAGCAAGAACATGAACAGAAACAGGTTGCCAAACCACCTAAAATCACAAGCGAAAAACCACCTACCACATGTAATGGAAGTGCCAGCAAGGAAGCGAAAGAAATGTTCAAAAACTACATGCTCAACATGCCCTGTGTTTCCACAATGGGCAAGGGGCCAAATGGTAAGAAGATTGAAGGATTTCTGTACAGATATCAGAAGGGAGAGGAAGTAAAAATAATGTGTGTTTGTCATGGTAACTTTCTCTCCCCAGCTGAGTTTGTGAAACATGCTGGTGGCGGTGATGTTGCAAATCCGTTGAAGCAAATTGTCGTCAATCCTTCACCTCTGTTGAGATGATGCCAGTGGAACTCTATAATGACACAGAAAAGGGGCAAAGCTTCAAGAATTCAGCTTTGCTATCATCGTTCATCTTCTTTTGTAACATGGACCAAGGTTCTTTTTTTATTTTCGAGTAGATAGTAGTTTCTTGCGGGATATTGCATAATCAATGGGCAAGTTTATCCCCTTTCTGTGGGAAAAAAAAATTTAAGAATTCCCATTGGCATTTATCTTTCAGTTATTCGTTATTTGGAAGTCCGCATTAATTTTTCGTACATGAAGGGACTGTAGAGTGCAGTTGGTTCCATATCGGTTTCAACACGAAATGTGACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E233824" ref_strand="+" ref_description="SGN-E233824 [cLEL-8-B14](-)">
      <seq>taaaaataatgtgtgtttgtcatggtaactttctctccccagctgagtttgtgaaacatgctggtggcggtgatgttgcaaatccgttgaagcaaattgtcgtcaatccttcacctctgttgagatgatgccagtggaactctataatgacacagaaaaggggcaaagcttcaagaattcagctttgctatcatcgttcatcttcttttgtaacatggaccaaggttctttttttattttcgagtagatagtagtttcttgcgggatattgcataatcaatgggcaagtttatcccctttctgtggggaaaaaaaatttaagaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="62442" stop="61519"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62142" g_stop="61820" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="323" r_length="323" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="324" polyA_stop="338"/>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-E233824" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>323</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E233824" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62142" e_stop="61820"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAAATAATGTGTGTTTGTCATGGTAACTTTCTCTCCCCAGCTGAGTTTGTGAAACATGCTGGTGGCGGTGATGTTGCAAATCCGTTGAAGCAAATTGTCGTCAATCCTTCACCTCTGTTGAGATGATGCCAGTGGAACTCTATAATGACACAGAAAAGGGGCAAAGCTTCAAGAATTCAGCTTTGCTATCATCGTTCATCTTCTTTTGTAACATGGACCAAGGTTCTTTTTTTATTTTCGAGTAGATAGTAGTTTCTTGCGGGATATTGCATAATCAATGGGCAAGTTTATCCCCTTTCTGTGGGGAAAAAAAATTTAAGA</genome_strand>
        <mrna_strand>TAAAAATAATGTGTGTTTGTCATGGTAACTTTCTCTCCCCAGCTGAGTTTGTGAAACATGCTGGTGGCGGTGATGTTGCAAATCCGTTGAAGCAAATTGTCGTCAATCCTTCACCTCTGTTGAGATGATGCCAGTGGAACTCTATAATGACACAGAAAAGGGGCAAAGCTTCAAGAATTCAGCTTTGCTATCATCGTTCATCTTCTTTTGTAACATGGACCAAGGTTCTTTTTTTATTTTCGAGTAGATAGTAGTTTCTTGCGGGATATTGCATAATCAATGGGCAAGTTTATCCCCTTTCTGTGGGGAAAAAAAATTTAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E723991" ref_strand="+" ref_description="SGN-E723991 [FC22CH05]">
      <seq>aatcggccgaattgatatggctcagttccctcttttgccggcgaattcaggaactccggcaactacattctctaacgtttacagaattttctgtttattataattgaattaaaaagttgtttggagttttggggtttggtttgtttaaaatggctgaagctgaagaaaatagagaaaagaggtgtttttctagtatgcagatggaagttttttcaagagatctgttgcataaatttatgaatggaaacaacaataaatttcatgaaattcctaatgaggaagatgaattggagctgagtttggggctttccttgaatggaagatttggggtagacccagaaagggctaagagactaaaacgctcttcttcaatttcaaactttgtgttttccggcggggatgagagtaatgggcgttgttcattctctgttggtccgattgcgaggacgtgttctttacctgttgagggtgaggaggagtgcaaaaaaaggaaggagttgcaatctctgaggcgtttggaggctaaaagaaagagaatggagaaattacgagtggttaaggataaggttgatttagatgaacgtcctgaagaaaatggtgggagtaataatggtccagttggaaattcattgcctctgtcacaagggtctatggcttctcagggaagtggttcttcaggaatttctgattttgggagtcaacccattcaagggccaggtgacaacagtactggggcaaatactccgactagcatcaagccttcagagcaagaacatgaacagaaacaggttgccaaaccacctaaaatcacaagcgaaaaaccacctaccacatgtaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="64747" stop="61979"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64432" g_stop="63747" g_length="686"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="711" r_length="686" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63746" i_stop="62407" i_length="1340">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62406" g_stop="62279" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="712" r_stop="839" r_length="128" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-E723991" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>814</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E723991" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64432" e_stop="63747"/>
          <exon e_start="62406" e_stop="62279"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAACTCTTTTGCCGGCGAATTCAGGAACTCCGGCAACTACATTCTCTAACGTTTACAGAATTTTCTGTTTATTATAATTGAATTAAAAAGTTGTTTGGAGTTTTGGGGTTTGGTTTGTTTAAAATGGCTGAAGCTGAAGAAAATAGAGAAAAGAGGTGTTTTTCTAGTATGCAGATGGAAGTTTTTTCAAGAGATCTGTTGCATAAATTTATGAATGGAAACAACAATAAATTTCATGAAATTCCTAATGAGGAAGATGAATTGGAGCTGAGTTTGGGGCTTTCCTTGAATGGAAGATTTGGGGTAGACCCAGAAAGGGCTAAGAGACTAAAACGCTCTTCTTCAATTTCAAACTTTGTGTTTTCCGGCGGGGATGAGAGTAATGGGCGTTGTTCATTCTCTGTTGGTCCGATTGCGAGGACGTGTTCTTTACCTGTTGAGGGTGAGGAGGAGTGCAGAAAAAGGAAGGAGTTGCAATCTCTGAGGCGTTTGGAGGCTAAAAGAAAGAGAATGGAGAAATTACGAGTGGTTAAGGATAAGGTTGATTTAGATGAACGTCCTGAAGAAAATGGTGGGAGTAATAATGGTCCAGTTGGAAATTCATTGCCTCTGTCACAAGGGTCTATGGCTTCTCAGGGAAGTGGTTCTTCAGGAATTTCTGATTTTGGGAGTCAACCCATTCAAGGTATTATTCTCGTTCATTAAATTTTTTTATCTTTACGGGCGATTTGGCCTTAGAATTCTCGGATTTATAGTGGTTAAGGTATTTATTTGCCTATTCTATTACTATCTTCCTATCGGGGGAGTTCTTATGTTCCTCATTAGAGTAAAGATAATTCTTTTACTACTCTTCGTTAGGGATCTTGTAAATATAGATTTTCAAGAAGAATCTTGTTCTTTAATAAATATAGTGTCTTGGTTATGGGCGATGTGCGCTAAAAATTATTATCCCACAACCATTTTGTTCAGAAAAGGGGAGAAATAAAATTTCCATACTTTAGGTTTCTATTATAGAGGAAGTGAGATGGACGTTGCCAAAGGAATAAAGATTAAGACATCTACCTGCACCTGGAGTCGTGGACTTCTTTAGGAACTTTCCTGTTGTTTACCTGAATTCACTGTCCACCCTTAATGTTGTGGTATTCACTGCAAATTTCCCCTCTTTCACCTTCTAATATCTGATATTCTTTGAACTGATCGGACATGCCGATTTTTCCAAGAGTGTTTTACATGTGGACTTACTGGGCGGTATCACTTGTTTCCGGGGGAGGGGGGTAAGAAATCCTTGAGGCTAATTCTTTCTTTTTTCCAGGAAGGTAGGAGTTTTTTTTTTAATCTAATGATAACTTCGGTTAAATAATTGTGCACTTATTGAAGCTTGGACCAAGTGTAGCAACTTTATATTAACTAAACGAATACACAATCTTAAAATTCTGGATCTGCCACTGCCGTGGTATGTTACCGTAGTAGAATTTGAGCGTCCTTTGTTTGGCTGACAATGTTTTAGCAGAATCTTATTTCTTCTTAGTCACTGTACGTTCTCAGAAGTTGTCTGCAGAGGAATCTTATTGCCTTTGATTAGCTTTGCCTGGTCCTGTCTCTTTGGGTGGAGTTTTATTGCCTATGTCGTAGAGATTTTGACCCCTCCTGCAACGCTGTATGTTCCAATTCAAAACAGCTACTGCTTGCAGTGGAGTTATATTGCCTATAGGTCCTTCGAGAGGGGTTGTAGTAAGATTTTACCCCCCCCCCCCCCTCTATCACTGTTTTTCCAACTCAAAGTAGCAACTAGTTCAAGTGGTGAACGTATGTGCTTTCTCTTGATGCTCTAGCGTGATGTTCTGCACGTGATCTCTCTAACACAATGTTTTTACCGCCGTTAAGACTTGAAGTAAGCTTTGATTTCTGTATCAAGCCATCTGTCCTTGCAGGTGGTTGATAGACAGATTCTCTTCACCGTCTCTCTCTTGCACATAGATTCCTGACGGGAAGAGCTGACCTATTTTCAATCTTAAACTATTGCAGGGCCAGGTGACAACAGTACTGGGGCAAATACTCCGACTAGCATCAAGCCTTCAGAGCAAGAACATGAACAGAAACAGGTTGCCAAACCACCTAAAATCACAAGCGAAAAACCACCTACCACATGTAAT</genome_strand>
        <mrna_strand>TTCCCTCTTTTGCCGGCGAATTCAGGAACTCCGGCAACTACATTCTCTAACGTTTACAGAATTTTCTGTTTATTATAATTGAATTAAAAAGTTGTTTGGAGTTTTGGGGTTTGGTTTGTTTAAAATGGCTGAAGCTGAAGAAAATAGAGAAAAGAGGTGTTTTTCTAGTATGCAGATGGAAGTTTTTTCAAGAGATCTGTTGCATAAATTTATGAATGGAAACAACAATAAATTTCATGAAATTCCTAATGAGGAAGATGAATTGGAGCTGAGTTTGGGGCTTTCCTTGAATGGAAGATTTGGGGTAGACCCAGAAAGGGCTAAGAGACTAAAACGCTCTTCTTCAATTTCAAACTTTGTGTTTTCCGGCGGGGATGAGAGTAATGGGCGTTGTTCATTCTCTGTTGGTCCGATTGCGAGGACGTGTTCTTTACCTGTTGAGGGTGAGGAGGAGTGCAAAAAAAGGAAGGAGTTGCAATCTCTGAGGCGTTTGGAGGCTAAAAGAAAGAGAATGGAGAAATTACGAGTGGTTAAGGATAAGGTTGATTTAGATGAACGTCCTGAAGAAAATGGTGGGAGTAATAATGGTCCAGTTGGAAATTCATTGCCTCTGTCACAAGGGTCTATGGCTTCTCAGGGAAGTGGTTCTTCAGGAATTTCTGATTTTGGGAGTCAACCCATTCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAGGTGACAACAGTACTGGGGCAAATACTCCGACTAGCATCAAGCCTTCAGAGCAAGAACATGAACAGAAACAGGTTGCCAAACCACCTAAAATCACAAGCGAAAAACCACCTACCACATGTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E304445" ref_strand="+" ref_description="SGN-E304445 [cLEX-12-O6]">
      <seq>tttatatggctcaagttaactcttttgccggcgaattcaggaactccggcaactacattctctaacgtttacagaattttctgtttattataattgaattaaaaagttgtttggagttttggggtttggtttgtttaaaatggctgaagctgaagaaaatagagaaaagaggtgtttttctagtatgcagatggaagttttttcaagagatctgttgcataaatttatgaatggaaacaacaataaatttcatgaaattcctaatgaggaagatgaattggagctgagtttggggctttccttgaatggaagatttggggtagacccagaaagggctaagagactaaaacgctcttcttcaatttcaaactttgtgttttccggcggggatgagagtaatgggcgttgttcattctctgttggtccgattgcgaggacgtgttctttacctgttgagggtgaggaggagtgcanaaaaaggaaggagttgcaatctctgaggcgtttggaggctaaaagaaagagaatggagaaattacgagtggttaaggataaggttgatttagatgaacgtcctgaagaaaatggtgggagtaataatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="64747" stop="63546"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64447" g_stop="63846" g_length="602"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="602" r_length="602" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-E304445" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E304445" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64447" e_stop="63846"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTATATGGCTCAAGTTAACTCTTTTGCCGGCGAATTCAGGAACTCCGGCAACTACATTCTCTAACGTTTACAGAATTTTCTGTTTATTATAATTGAATTAAAAAGTTGTTTGGAGTTTTGGGGTTTGGTTTGTTTAAAATGGCTGAAGCTGAAGAAAATAGAGAAAAGAGGTGTTTTTCTAGTATGCAGATGGAAGTTTTTTCAAGAGATCTGTTGCATAAATTTATGAATGGAAACAACAATAAATTTCATGAAATTCCTAATGAGGAAGATGAATTGGAGCTGAGTTTGGGGCTTTCCTTGAATGGAAGATTTGGGGTAGACCCAGAAAGGGCTAAGAGACTAAAACGCTCTTCTTCAATTTCAAACTTTGTGTTTTCCGGCGGGGATGAGAGTAATGGGCGTTGTTCATTCTCTGTTGGTCCGATTGCGAGGACGTGTTCTTTACCTGTTGAGGGTGAGGAGGAGTGCAGAAAAAGGAAGGAGTTGCAATCTCTGAGGCGTTTGGAGGCTAAAAGAAAGAGAATGGAGAAATTACGAGTGGTTAAGGATAAGGTTGATTTAGATGAACGTCCTGAAGAAAATGGTGGGAGTAATAATG</genome_strand>
        <mrna_strand>TTTATATGGCTCAAGTTAACTCTTTTGCCGGCGAATTCAGGAACTCCGGCAACTACATTCTCTAACGTTTACAGAATTTTCTGTTTATTATAATTGAATTAAAAAGTTGTTTGGAGTTTTGGGGTTTGGTTTGTTTAAAATGGCTGAAGCTGAAGAAAATAGAGAAAAGAGGTGTTTTTCTAGTATGCAGATGGAAGTTTTTTCAAGAGATCTGTTGCATAAATTTATGAATGGAAACAACAATAAATTTCATGAAATTCCTAATGAGGAAGATGAATTGGAGCTGAGTTTGGGGCTTTCCTTGAATGGAAGATTTGGGGTAGACCCAGAAAGGGCTAAGAGACTAAAACGCTCTTCTTCAATTTCAAACTTTGTGTTTTCCGGCGGGGATGAGAGTAATGGGCGTTGTTCATTCTCTGTTGGTCCGATTGCGAGGACGTGTTCTTTACCTGTTGAGGGTGAGGAGGAGTGCANAAAAAGGAAGGAGTTGCAATCTCTGAGGCGTTTGGAGGCTAAAAGAAAGAGAATGGAGAAATTACGAGTGGTTAAGGATAAGGTTGATTTAGATGAACGTCCTGAAGAAAATGGTGGGAGTAATAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E313409" ref_strand="+" ref_description="SGN-E313409 [cTOA-13-C6]">
      <seq>tcaagttaactcttttgccggcgaattcaggaactccggcaactacattctctaacgtttacagaattttctgtttattataattgaattaaaaagttgtttggagttttggggtttggtttgtttaaaatggctgaagctgaagaaaatagagaaaagaggtgtttttctagtatgcagatggaagttttttcaagagatctgttgcataaatttatgaatggaaacaacaataaatttcatgaaattcctaatgaggaagatgaattggagctgagtttggggctttccttgaatggaagatttggggtagacccagaaagggctaagagactaaaacgctcttcttcaatttcaaactttgtgttttccggcggggatgagagtaatgggcgttgttcattctctgttggtccgattgcgaggacgtgttctttacctgttgagggtgaggaggagtgcagaaaaaggaaggagttgcaatctctgaggcgtttggaggctaaaagaaagagaatggagaaattacgagtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="64737" stop="63603"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64437" g_stop="63903" g_length="535"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="535" r_length="535" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-E313409" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E313409" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64437" e_stop="63903"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGTTAACTCTTTTGCCGGCGAATTCAGGAACTCCGGCAACTACATTCTCTAACGTTTACAGAATTTTCTGTTTATTATAATTGAATTAAAAAGTTGTTTGGAGTTTTGGGGTTTGGTTTGTTTAAAATGGCTGAAGCTGAAGAAAATAGAGAAAAGAGGTGTTTTTCTAGTATGCAGATGGAAGTTTTTTCAAGAGATCTGTTGCATAAATTTATGAATGGAAACAACAATAAATTTCATGAAATTCCTAATGAGGAAGATGAATTGGAGCTGAGTTTGGGGCTTTCCTTGAATGGAAGATTTGGGGTAGACCCAGAAAGGGCTAAGAGACTAAAACGCTCTTCTTCAATTTCAAACTTTGTGTTTTCCGGCGGGGATGAGAGTAATGGGCGTTGTTCATTCTCTGTTGGTCCGATTGCGAGGACGTGTTCTTTACCTGTTGAGGGTGAGGAGGAGTGCAGAAAAAGGAAGGAGTTGCAATCTCTGAGGCGTTTGGAGGCTAAAAGAAAGAGAATGGAGAAATTACGAGTGG</genome_strand>
        <mrna_strand>TCAAGTTAACTCTTTTGCCGGCGAATTCAGGAACTCCGGCAACTACATTCTCTAACGTTTACAGAATTTTCTGTTTATTATAATTGAATTAAAAAGTTGTTTGGAGTTTTGGGGTTTGGTTTGTTTAAAATGGCTGAAGCTGAAGAAAATAGAGAAAAGAGGTGTTTTTCTAGTATGCAGATGGAAGTTTTTTCAAGAGATCTGTTGCATAAATTTATGAATGGAAACAACAATAAATTTCATGAAATTCCTAATGAGGAAGATGAATTGGAGCTGAGTTTGGGGCTTTCCTTGAATGGAAGATTTGGGGTAGACCCAGAAAGGGCTAAGAGACTAAAACGCTCTTCTTCAATTTCAAACTTTGTGTTTTCCGGCGGGGATGAGAGTAATGGGCGTTGTTCATTCTCTGTTGGTCCGATTGCGAGGACGTGTTCTTTACCTGTTGAGGGTGAGGAGGAGTGCAGAAAAAGGAAGGAGTTGCAATCTCTGAGGCGTTTGGAGGCTAAAAGAAAGAGAATGGAGAAATTACGAGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E332647" ref_strand="+" ref_description="SGN-E332647 [cTOD-18-D6]">
      <seq>ttgttcctctttttctctgtttttctttatatggctcaagttaactcttttgccggcgaattcaggaactccggcaactacattctctaacgtttacagaattttctgtttattataattgaattaaaaagttgtttggagttttggggtttggtttgtttaaaatggctgaagctgaagaaaatagagaaaagaggtgtttttctagtatgcagatggaagttttttcaagagatctgttgcataaatttatgaatggaaacacaataaatttcatgaaattcctaatgaggaagatgaaattggagctgagtttggggctttccttgaatggaagatttggggtagacccagaaagggctaagagactaaaacgctcttcttcaatttcaactttgtgttttccggcggggatgagagtaatggggcgtgttcattctctgntggtccgattgcgaggacgtngtctttacctgttgagggtgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="64772" stop="63685"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64472" g_stop="63985" g_length="488"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="487" r_length="487" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-E332647" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E332647" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64472" e_stop="63985"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTCCTCTTTTTCTCTGTTTTTCTTTATATGGCTCAAGTTAACTCTTTTGCCGGCGAATTCAGGAACTCCGGCAACTACATTCTCTAACGTTTACAGAATTTTCTGTTTATTATAATTGAATTAAAAAGTTGTTTGGAGTTTTGGGGTTTGGTTTGTTTAAAATGGCTGAAGCTGAAGAAAATAGAGAAAAGAGGTGTTTTTCTAGTATGCAGATGGAAGTTTTTTCAAGAGATCTGTTGCATAAATTTATGAATGGAAACAACAATAAATTTCATGAAATTCCTAATGAGGAAGATG-AATTGGAGCTGAGTTTGGGGCTTTCCTTGAATGGAAGATTTGGGGTAGACCCAGAAAGGGCTAAGAGACTAAAACGCTCTTCTTCAATTTCAAACTTTGTGTTTTCCGGCGGGGATGAGAGTAATGGGCGTTGTTCATTCTCTGTTGGTCCGATTGCGAGGACGTGTTCTTTACCTGTTGAGGGTGAG</genome_strand>
        <mrna_strand>TTGTTCCTCTTTTTCTCTGTTTTTCTTTATATGGCTCAAGTTAACTCTTTTGCCGGCGAATTCAGGAACTCCGGCAACTACATTCTCTAACGTTTACAGAATTTTCTGTTTATTATAATTGAATTAAAAAGTTGTTTGGAGTTTTGGGGTTTGGTTTGTTTAAAATGGCTGAAGCTGAAGAAAATAGAGAAAAGAGGTGTTTTTCTAGTATGCAGATGGAAGTTTTTTCAAGAGATCTGTTGCATAAATTTATGAATGGAAAC-ACAATAAATTTCATGAAATTCCTAATGAGGAAGATGAAATTGGAGCTGAGTTTGGGGCTTTCCTTGAATGGAAGATTTGGGGTAGACCCAGAAAGGGCTAAGAGACTAAAACGCTCTTCTTCAATTTC-AACTTTGTGTTTTCCGGCGGGGATGAGAGTAATGGGGCGTGTTCATTCTCTGNTGGTCCGATTGCGAGGACGTNGTCTTTACCTGTTGAGGGTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E334792" ref_strand="+" ref_description="SGN-E334792 [cTOE-3-F18]">
      <seq>ctcttttgccggcgaattcaggaactccggcaactacattctctaacgtttacagaattttctgtttattataattgaattaaaaagttgtttggagttttggggtttggtttgtttaaaatggctgaagctgaagaaaatagagaaaagaggtgtttttctagtatgcagatggaagttttttcaagagatctgttgcataaatttatgaatggaaacaacaataaatttcatgaaattcctaatgaggaagatgaattggagctgagtttggggctttccttgaatggaagatttggggtagacccagaaagggctaagagactaaaacgctcttcttcaatttcaaactttgtgttttccggcggggatgagagtaatgggcgttgttcattctctgttggtccgattgcgaggacgtgttctttacctgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="64728" stop="63693"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64428" g_stop="63993" g_length="436"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="436" r_length="436" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-E334792" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>436</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E334792" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64428" e_stop="63993"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTTTGCCGGCGAATTCAGGAACTCCGGCAACTACATTCTCTAACGTTTACAGAATTTTCTGTTTATTATAATTGAATTAAAAAGTTGTTTGGAGTTTTGGGGTTTGGTTTGTTTAAAATGGCTGAAGCTGAAGAAAATAGAGAAAAGAGGTGTTTTTCTAGTATGCAGATGGAAGTTTTTTCAAGAGATCTGTTGCATAAATTTATGAATGGAAACAACAATAAATTTCATGAAATTCCTAATGAGGAAGATGAATTGGAGCTGAGTTTGGGGCTTTCCTTGAATGGAAGATTTGGGGTAGACCCAGAAAGGGCTAAGAGACTAAAACGCTCTTCTTCAATTTCAAACTTTGTGTTTTCCGGCGGGGATGAGAGTAATGGGCGTTGTTCATTCTCTGTTGGTCCGATTGCGAGGACGTGTTCTTTACCTGTTG</genome_strand>
        <mrna_strand>CTCTTTTGCCGGCGAATTCAGGAACTCCGGCAACTACATTCTCTAACGTTTACAGAATTTTCTGTTTATTATAATTGAATTAAAAAGTTGTTTGGAGTTTTGGGGTTTGGTTTGTTTAAAATGGCTGAAGCTGAAGAAAATAGAGAAAAGAGGTGTTTTTCTAGTATGCAGATGGAAGTTTTTTCAAGAGATCTGTTGCATAAATTTATGAATGGAAACAACAATAAATTTCATGAAATTCCTAATGAGGAAGATGAATTGGAGCTGAGTTTGGGGCTTTCCTTGAATGGAAGATTTGGGGTAGACCCAGAAAGGGCTAAGAGACTAAAACGCTCTTCTTCAATTTCAAACTTTGTGTTTTCCGGCGGGGATGAGAGTAATGGGCGTTGTTCATTCTCTGTTGGTCCGATTGCGAGGACGTGTTCTTTACCTGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E333368" ref_strand="+" ref_description="SGN-E333368 [cTOD-20-A6]">
      <seq>ttgttcctctttttctctgtttttctttatatggctcaagttaactcttttgccggcgaattcaggaactccggcaactacattctctaacgtttacagaattttctgtttattataattgaattaaaaagttgtttggagttttggggtttggtttgtttaaaatggctgaagctgaagaaaatagagaaaagaggtgtttttctagtatgcagatggaagttttttcaagagatctgttgcataaatttatgaatggaaacaacaataaatttcatgaaattcctaatgaggaagatgaattggagctgagtttggggctttccttgaatggaagatttggggtagacccagaaagggctaagagactaaaacgctcttcttcaatttcaaactttgtgttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="64772" stop="63767"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64472" g_stop="64067" g_length="406"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="406" r_length="406" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-E333368" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>406</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E333368" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64472" e_stop="64067"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTCCTCTTTTTCTCTGTTTTTCTTTATATGGCTCAAGTTAACTCTTTTGCCGGCGAATTCAGGAACTCCGGCAACTACATTCTCTAACGTTTACAGAATTTTCTGTTTATTATAATTGAATTAAAAAGTTGTTTGGAGTTTTGGGGTTTGGTTTGTTTAAAATGGCTGAAGCTGAAGAAAATAGAGAAAAGAGGTGTTTTTCTAGTATGCAGATGGAAGTTTTTTCAAGAGATCTGTTGCATAAATTTATGAATGGAAACAACAATAAATTTCATGAAATTCCTAATGAGGAAGATGAATTGGAGCTGAGTTTGGGGCTTTCCTTGAATGGAAGATTTGGGGTAGACCCAGAAAGGGCTAAGAGACTAAAACGCTCTTCTTCAATTTCAAACTTTGTGTTTTC</genome_strand>
        <mrna_strand>TTGTTCCTCTTTTTCTCTGTTTTTCTTTATATGGCTCAAGTTAACTCTTTTGCCGGCGAATTCAGGAACTCCGGCAACTACATTCTCTAACGTTTACAGAATTTTCTGTTTATTATAATTGAATTAAAAAGTTGTTTGGAGTTTTGGGGTTTGGTTTGTTTAAAATGGCTGAAGCTGAAGAAAATAGAGAAAAGAGGTGTTTTTCTAGTATGCAGATGGAAGTTTTTTCAAGAGATCTGTTGCATAAATTTATGAATGGAAACAACAATAAATTTCATGAAATTCCTAATGAGGAAGATGAATTGGAGCTGAGTTTGGGGCTTTCCTTGAATGGAAGATTTGGGGTAGACCCAGAAAGGGCTAAGAGACTAAAACGCTCTTCTTCAATTTCAAACTTTGTGTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E334894" ref_strand="+" ref_description="SGN-E334894 [cTOE-3-H2]">
      <seq>ctcttttgccggcgaattcaggaactccggcaactacattctctaacgtttacagaattttctgtttattataattgaattaaaaagttgtttggagttttggggtttggtttgtttaaaatggctgaagctgaagaaaatagagaaaagaggtgtttttctagtatgcagatggaagttttttcaagagatctgttgcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="64728" stop="63928"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64428" g_stop="64228" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="201" r_length="201" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-E334894" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>201</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E334894" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64428" e_stop="64228"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTTTGCCGGCGAATTCAGGAACTCCGGCAACTACATTCTCTAACGTTTACAGAATTTTCTGTTTATTATAATTGAATTAAAAAGTTGTTTGGAGTTTTGGGGTTTGGTTTGTTTAAAATGGCTGAAGCTGAAGAAAATAGAGAAAAGAGGTGTTTTTCTAGTATGCAGATGGAAGTTTTTTCAAGAGATCTGTTGCAT</genome_strand>
        <mrna_strand>CTCTTTTGCCGGCGAATTCAGGAACTCCGGCAACTACATTCTCTAACGTTTACAGAATTTTCTGTTTATTATAATTGAATTAAAAAGTTGTTTGGAGTTTTGGGGTTTGGTTTGTTTAAAATGGCTGAAGCTGAAGAAAATAGAGAAAAGAGGTGTTTTTCTAGTATGCAGATGGAAGTTTTTTCAAGAGATCTGTTGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E373955" ref_strand="+" ref_description="SGN-E373955 [TUS-33-I15](-)">
      <seq>atcatcaattcatactgcctctgggggtaatgcatctgaatctaaagatgctcagtacagagctgagggacactccatttatatccgcaatttgcctttaaatgttactgttgctcaacttgaggttgaatttaagagatttggacccattatgcaaggaggcatacaagttagaagtaataggcaacaaggattctgcttcgggtttgttgaatttgaagatttgaactccatgaacagcgcgatacaggcctcacctgttacaattggaggtcttcaagctgagcttgaaataaagcgaactacaagtagagttggtagcgggagaggtcgtttccctaccggaagaggagcagggtaccgaaatgaaaatttcaggggccgcggaaactttagtggtgcaggtagaggatatggtagaagtgattttaatggaggtcgtggaggacgaggtggtgaaagttaccaacaaggaagagggagaggcggacggagaggtggcctaagccaaattccttcttcagcatagaagttttatgttgcaaattttgacggtgtttccttcttcagcatagaagttttgtgttgcaaattttgaccaagctttgtgttgccattggcaccaacaggttaattgtgcagtttagtttgatatttttcttattatacttttttcgttttcaattaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="72425" stop="70299"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72125" g_stop="72064" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72063" i_stop="71800" i_length="264">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.817" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71799" g_stop="71678" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="184" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71677" i_stop="71568" i_length="110">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71567" g_stop="71502" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="250" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71501" i_stop="71171" i_length="331">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="71170" g_stop="71107" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="314" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="71106" i_stop="70972" i_length="135">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="70971" g_stop="70600" g_length="372"/>
          <reference_exon_boundary r_type="cDNA" r_start="315" r_stop="686" r_length="372" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="687" polyA_stop="697"/>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-E373955" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>686</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E373955" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72125" e_stop="72064"/>
          <exon e_start="71799" e_stop="71678"/>
          <exon e_start="71567" e_stop="71502"/>
          <exon e_start="71170" e_stop="71107"/>
          <exon e_start="70971" e_stop="70600"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCATCAATTCATACTGCCTCTGGGGGTAATGCATCTGAATCTAAAGATGCTCAGTACAGAGGTATAATATCAAAAAATCTTTCACTTGCTTGAAATATATCATTCATTACTTTCATTTGTGAAGCATCCAACCGGGCTGCTATATTAGAATAGAACTTTCATATTTTATTATAGGATGTAAAGGAATGCTGAAGTACATAGACAAGTGTTTGAGTTTTTCTTCATACAATGAGCCGTTGCTACTACTTGCATGATCAAACTTAACAGTTTCTCCATTGGCTCTTTTTTTCTTATTGCTTACAATCTTCTTATTTATTGGTTCCAGCTGAGGGACACTCCATTTATATCCGCAATTTGCCTTTAAATGTTACTGTTGCTCAACTTGAGGTTGAATTTAAGAGATTTGGACCCATTATGCAAGGAGGCATACAAGTTAGAAGTAATAGGGTTAGTCCAGAAAACATACTTTTTACTCATTTGTCCTCCTCTCATCTACTTAATTTTATACTTAATTTTATAAATCTTTAATAATATCTATTGATTTCGTGTTTCTGCAGCAACAAGGATTCTGCTTCGGGTTTGTTGAATTTGAAGATTTGAACTCCATGAACAGCGCGATACAGGTTTGTCCCCTTCAAATAATTTTTTAGATAGCCATCTTCATGTGAAGTTAAAATTTGTCCAGCATCCCGATTATATGCTACAATTGTGTGTATGGAAGTGTGCCATGAAGTTTTAAATTGAAGAGATCTAGTATTTTAGGAACCATAAGTTTTCTTACTTTATTGAGTCTGTATAAAGTTGGCCCAAATTTGATGTTTCATCATGAATCTAAAACTAGGTTATAAACTTTCCCCATTTTATTTATCTGTTTTACGTGAAAACGTGTGTTATTATGGCGCTATGGTTACATTTGTCGGTTTCATGAGTTATATGTACGAATTTTTTATTCAGGCCTCACCTGTTACAATTGGAGGTCTTCAAGCTGAGCTTGAAATAAAGCGAACTACAAGTAGAGGTCAGTTACAGATTACAACTAACAAATTAGTCATCAATTTCTTCTCACTTTTATTTGTTTTGTTAAAATCTCTTTGTTTGGACCACAACTTCTTCACATAATTGATGCATGTGCATTTTCAATTTCCTATTGCAGTTGGTAGCGGGAGAGGTCGTTTCCCTACCGGAAGAGGAGCAGGGTACCGAAATGAAAATTTCAGGGGCCGCGGAAACTTTAGTGGTGCAGGTAGAGGATATGGTAGAAGTGATTTTAATGGAGGTCGTGGAGGACGAGGTGGTGAAAGTTACCAACAAGGAAGAGGGAGAGGCGGACGGAGAGGTGGCCTAAGCCAAATTCCTTCTTCAGCATAGAAGTTTTATGTTGCAAATTTTGACGGTGTTTCCTTCTTCAGCATAGAAGTTTTGTGTTGCAAATTTTGACCAAGCTTTGTGTTGCCATTGGCACCAACAGGTTAATTGTGCAGTTTAGTTTGATATTTTTCTTATTATACTTTTTTCGTTTTCAATT</genome_strand>
        <mrna_strand>ATCATCAATTCATACTGCCTCTGGGGGTAATGCATCTGAATCTAAAGATGCTCAGTACAGAG........................................................................................................................................................................................................................................................................CTGAGGGACACTCCATTTATATCCGCAATTTGCCTTTAAATGTTACTGTTGCTCAACTTGAGGTTGAATTTAAGAGATTTGGACCCATTATGCAAGGAGGCATACAAGTTAGAAGTAATAGG..............................................................................................................CAACAAGGATTCTGCTTCGGGTTTGTTGAATTTGAAGATTTGAACTCCATGAACAGCGCGATACAG...........................................................................................................................................................................................................................................................................................................................................GCCTCACCTGTTACAATTGGAGGTCTTCAAGCTGAGCTTGAAATAAAGCGAACTACAAGTAGAG.......................................................................................................................................TTGGTAGCGGGAGAGGTCGTTTCCCTACCGGAAGAGGAGCAGGGTACCGAAATGAAAATTTCAGGGGCCGCGGAAACTTTAGTGGTGCAGGTAGAGGATATGGTAGAAGTGATTTTAATGGAGGTCGTGGAGGACGAGGTGGTGAAAGTTACCAACAAGGAAGAGGGAGAGGCGGACGGAGAGGTGGCCTAAGCCAAATTCCTTCTTCAGCATAGAAGTTTTATGTTGCAAATTTTGACGGTGTTTCCTTCTTCAGCATAGAAGTTTTGTGTTGCAAATTTTGACCAAGCTTTGTGTTGCCATTGGCACCAACAGGTTAATTGTGCAGTTTAGTTTGATATTTTTCTTATTATACTTTTTTCGTTTTCAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E210930" ref_strand="+" ref_description="SGN-E210930 [cLEC-69-O2]">
      <seq>gaaagagagattatggtgggtgctgaatcccatattaatgcagaaccagctacttcagtttcccgagaagatgctcctaagaaatcttatgcttcaattgtaagttctcaaacaaagaaagggcccgccaaaatctatgtaccctctaattcaagaatggctcccgcaaagactgaaaagcagccagttaagtcagtggcacaagctcctgttcctgaatcatcaattcatactgcctctgggggtaatgcatctgaatctaaagatgctcagtacagagctgagggacactccatttatatccgcaatttgcctttaaatgttactgttgctcaacttgaggttgaatttaagagatttggacccattatgcaaggaggcatacaagttagaagtaataggcaacaaggattctgcttcgggtttgttgaatttgaagatttgaactccatgaacagcgcgatacaggcctcacctgttacaattggaggtcttcaagctgagcttgaaataaagcgaactacaagtaaagttggtagcgggagaagtcgttttcctaccgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="72643" stop="70640"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72343" g_stop="72064" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="280" r_length="280" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72063" i_stop="71800" i_length="264">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.817" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71799" g_stop="71678" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="402" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71677" i_stop="71568" i_length="110">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71567" g_stop="71502" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="468" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71501" i_stop="71171" i_length="331">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="71170" g_stop="71107" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="532" r_length="64" r_score="0.984"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="71106" i_stop="70972" i_length="135">
            <donor d_prob="0.986" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="70971" g_stop="70940" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="533" r_stop="564" r_length="32" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-E210930" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>564</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E210930" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72343" e_stop="72064"/>
          <exon e_start="71799" e_stop="71678"/>
          <exon e_start="71567" e_stop="71502"/>
          <exon e_start="71170" e_stop="71107"/>
          <exon e_start="70971" e_stop="70940"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGAGAGATTATGGTGGGTGCTGAATCCCATATTAATGCAGAACCAGCTACTTCAGTTTCCCGAGAAGATGCTCCTAAGAAATCTTATGCTTCAATTGTAAGTTCTCAAACAAAGAAAGGGCCCGCCAAAATCTATGTACCCTCTAATTCAAGAATGGCTCCCGCAAAGACTGAAAAGCAGCCAGTTAAGTCAGTGGCACAAGCTCCTGTTCCTGAATCATCAATTCATACTGCCTCTGGGGGTAATGCATCTGAATCTAAAGATGCTCAGTACAGAGGTATAATATCAAAAAATCTTTCACTTGCTTGAAATATATCATTCATTACTTTCATTTGTGAAGCATCCAACCGGGCTGCTATATTAGAATAGAACTTTCATATTTTATTATAGGATGTAAAGGAATGCTGAAGTACATAGACAAGTGTTTGAGTTTTTCTTCATACAATGAGCCGTTGCTACTACTTGCATGATCAAACTTAACAGTTTCTCCATTGGCTCTTTTTTTCTTATTGCTTACAATCTTCTTATTTATTGGTTCCAGCTGAGGGACACTCCATTTATATCCGCAATTTGCCTTTAAATGTTACTGTTGCTCAACTTGAGGTTGAATTTAAGAGATTTGGACCCATTATGCAAGGAGGCATACAAGTTAGAAGTAATAGGGTTAGTCCAGAAAACATACTTTTTACTCATTTGTCCTCCTCTCATCTACTTAATTTTATACTTAATTTTATAAATCTTTAATAATATCTATTGATTTCGTGTTTCTGCAGCAACAAGGATTCTGCTTCGGGTTTGTTGAATTTGAAGATTTGAACTCCATGAACAGCGCGATACAGGTTTGTCCCCTTCAAATAATTTTTTAGATAGCCATCTTCATGTGAAGTTAAAATTTGTCCAGCATCCCGATTATATGCTACAATTGTGTGTATGGAAGTGTGCCATGAAGTTTTAAATTGAAGAGATCTAGTATTTTAGGAACCATAAGTTTTCTTACTTTATTGAGTCTGTATAAAGTTGGCCCAAATTTGATGTTTCATCATGAATCTAAAACTAGGTTATAAACTTTCCCCATTTTATTTATCTGTTTTACGTGAAAACGTGTGTTATTATGGCGCTATGGTTACATTTGTCGGTTTCATGAGTTATATGTACGAATTTTTTATTCAGGCCTCACCTGTTACAATTGGAGGTCTTCAAGCTGAGCTTGAAATAAAGCGAACTACAAGTAGAGGTCAGTTACAGATTACAACTAACAAATTAGTCATCAATTTCTTCTCACTTTTATTTGTTTTGTTAAAATCTCTTTGTTTGGACCACAACTTCTTCACATAATTGATGCATGTGCATTTTCAATTTCCTATTGCAGTTGGTAGCGGGAGAGGTCGTTTCCCTACCGGA</genome_strand>
        <mrna_strand>GAAAGAGAGATTATGGTGGGTGCTGAATCCCATATTAATGCAGAACCAGCTACTTCAGTTTCCCGAGAAGATGCTCCTAAGAAATCTTATGCTTCAATTGTAAGTTCTCAAACAAAGAAAGGGCCCGCCAAAATCTATGTACCCTCTAATTCAAGAATGGCTCCCGCAAAGACTGAAAAGCAGCCAGTTAAGTCAGTGGCACAAGCTCCTGTTCCTGAATCATCAATTCATACTGCCTCTGGGGGTAATGCATCTGAATCTAAAGATGCTCAGTACAGAG........................................................................................................................................................................................................................................................................CTGAGGGACACTCCATTTATATCCGCAATTTGCCTTTAAATGTTACTGTTGCTCAACTTGAGGTTGAATTTAAGAGATTTGGACCCATTATGCAAGGAGGCATACAAGTTAGAAGTAATAGG..............................................................................................................CAACAAGGATTCTGCTTCGGGTTTGTTGAATTTGAAGATTTGAACTCCATGAACAGCGCGATACAG...........................................................................................................................................................................................................................................................................................................................................GCCTCACCTGTTACAATTGGAGGTCTTCAAGCTGAGCTTGAAATAAAGCGAACTACAAGTAAAG.......................................................................................................................................TTGGTAGCGGGAGAAGTCGTTTTCCTACCGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E373956" ref_strand="+" ref_description="SGN-E373956 [TUS-33-I15]">
      <seq>tggaaactacagctataccttctgcccctgctgcacaagtgatcggaaatgcttttgttgagcagtattaccaaattcaacaccactccccagagttggtatacagattttgtctggattcaagtgtcttaagccgcccaaattctaatggcgtgatgacatccgtgacaacaatgaaaaatatcaatgacatgatatgctcattaggctacaagaattataaggcagagataaagactgcagatgcacaacagtcctacaaggatggggtcattgtattggttactggatgcttaactggaaaagataacacgagaaagcaattcacccagacttttttccttgctccacaggacaaaggctactttgttttgaatgatgttcttaggtatgcagaacaagtggagactgataacagttcagaaatggttaatgcggtcaaggatgtagcacccgtgcctttgacgcctgatccagaaccagttcatgtgcttcagccttcgaatcacagacagcctagctctcatgcagaagatataaaaattgttgaggaagtagttcatggttctttggaaaatgagaaggtagttggtgatgaaagagagattatggtgggtgctgaatcccatattaatgcaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="74244" stop="72000"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73944" g_stop="73766" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73765" i_stop="72842" i_length="924">
            <donor d_prob="0.893" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72841" g_stop="72544" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="477" r_length="298" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72543" i_stop="72463" i_length="81">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72462" g_stop="72300" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="478" r_stop="640" r_length="163" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-E373956" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E373956" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73944" e_stop="73766"/>
          <exon e_start="72841" e_stop="72544"/>
          <exon e_start="72462" e_stop="72300"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAAACTACAGCTATACCTTCTGCCCCTGCTGCACAAGTGATCGGAAATGCTTTTGTTGAGCAGTATTACCAAATTCAACACCACTCCCCAGAGTTGGTATACAGATTTTGTCTGGATTCAAGTGTCTTAAGCCGCCCAAATTCTAATGGCGTGATGACATCCGTGACAACAATGAAAGTGAGTATAAATGCAATTGTTGTTCCTTCTACTATACCAGAGAACTTTTATGAATAAGGGAAAAAAAACATGGTCTAAAACTCTAAGGCTAATACAAACTTTTATCTGCTGTCGGTTTATCAACATCATAGGTGTTAGTTCACAATGAGAGTTTCACCCCTTCTAAATCGTGTGATCTCCTGGAAACTTCTGTTTTGGGGGGGGGTGGGGGTGGTTAAGTTTGGTGGAAGTCGATAATTGAGGGGCACATTTGAGGACTTTTTCCATAGAAGAAACTGATTGTATAATGCTGAATATAATCTGACCTGCTATTAGTGAAGAACTTAGTTGCATCTGGATGTGGAAGCACAGGGAATTGGACAAATGATAAACTACGTAGAGGACTATAGACTCTTAGTCTTACTTTGGCGTTGGTTAATGATTGACAATAAGAATGAAAATCAACCACATAAATAGAGCAATTAAACTGCTGGGCTTGTGCAGTTGCAAGTCACTTTTAGAAATTATTAAGATGTATGAACATATCGCGAAACCTGTCAACCCTACAATATCTTGAAATAATAAGGTTCTTGGTTTGTAGCTTCAAAGCTAGTGTTTAAATGATTTGCAAGAAATTTCTTTTCGAGAAAATTGGAACTCTATTTAATATTCTAATACAATTCAGAATGATCTTGCGATTATGATGTAACATTCAGAAACTTGCATTCTCTGGGAGAGTTGTGTTATCATTTCTCTAAAGTTTTACCATTAGAAGTAGTTGGCAAAATGGTGAAGTGCTTTCTCTATTTCTTACCTTGCACCATGTTCACATATTTATCTTGGCAAGTTTGCAATATAAAATAACAATTGATTTCTCATTCCACAATTCTGACTAATTTTCACTTATCTTTAACTGATTTTTCACTTATCTTTATGTTGGATCAGAATATCAATGACATGATATGCTCATTAGGCTACAAGAATTATAAGGCAGAGATAAAGACTGCAGATGCACAACAGTCCTACAAGGATGGGGTCATTGTATTGGTTACTGGATGCTTAACTGGAAAAGATAACACGAGAAAGCAATTCACCCAGACTTTTTTCCTTGCTCCACAGGACAAAGGCTACTTTGTTTTGAATGATGTTCTTAGGTATGCAGAACAAGTGGAGACTGATAACAGTTCAGAAATGGTTAATGCGGTCAAGGATGTAGCACCCGTGCCTTTGACGCCTGATCCAGGTTGGATATTTTGTCTAATTCCACACTTTTCTTCTTTTTACTTTTCAAATTGCTTACTTGGCTTTTTTGTTTTGATTCTAGAACCAGTTCATGTGCTTCAGCCTTCGAATCACAGACAGCCTAGCTCTCATGCAGAAGATATAAAAATTGTTGAGGAAGTAGTTCATGGTTCTTTGGAAAATGAGAAGGTAGTTGGTGATGAAAGAGAGATTATGGTGGGTGCTGAATCCCATATTAATGCAGA</genome_strand>
        <mrna_strand>TGGAAACTACAGCTATACCTTCTGCCCCTGCTGCACAAGTGATCGGAAATGCTTTTGTTGAGCAGTATTACCAAATTCAACACCACTCCCCAGAGTTGGTATACAGATTTTGTCTGGATTCAAGTGTCTTAAGCCGCCCAAATTCTAATGGCGTGATGACATCCGTGACAACAATGAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATCAATGACATGATATGCTCATTAGGCTACAAGAATTATAAGGCAGAGATAAAGACTGCAGATGCACAACAGTCCTACAAGGATGGGGTCATTGTATTGGTTACTGGATGCTTAACTGGAAAAGATAACACGAGAAAGCAATTCACCCAGACTTTTTTCCTTGCTCCACAGGACAAAGGCTACTTTGTTTTGAATGATGTTCTTAGGTATGCAGAACAAGTGGAGACTGATAACAGTTCAGAAATGGTTAATGCGGTCAAGGATGTAGCACCCGTGCCTTTGACGCCTGATCCAG.................................................................................AACCAGTTCATGTGCTTCAGCCTTCGAATCACAGACAGCCTAGCTCTCATGCAGAAGATATAAAAATTGTTGAGGAAGTAGTTCATGGTTCTTTGGAAAATGAGAAGGTAGTTGGTGATGAAAGAGAGATTATGGTGGGTGCTGAATCCCATATTAATGCAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E305675" ref_strand="+" ref_description="SGN-E305675 [cLEX-14-J22]">
      <seq>tggaaactacagctataccttctgcccctgctgcacaagtgatcggaaatgcttttgttgagcagtattaccaaattcaacaccactccccagagttggtatacagattttgtctggattcaagtgtcttaagccgcccaaattctaatggcgtgatgacatccgtgacaacaatgaaaaatatcaatgacatgatatgctcattaggctacaagaattataaggcagagataaagactgcagatgcacaacagtcctacaaggatggggtcattgtattggttactggatgcttaactggaaaagataacacgagaaagcaattcacccagacttttttccttgctccacaggacaaaggctactttgttttgaatgatgttcttaggtatgcagaacaagtggagactgataacagttcagaaatggttaatgcggtcaaggatgtagcacccgtgcctttgacgcctgatccagaaccagttcatgtgcttcagccttcgaatcacagacagcctagctctcatgcagaagatataaaaattgttgaggaagtagttcatggttctttggaaaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="74244" stop="72061"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73944" g_stop="73766" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73765" i_stop="72842" i_length="924">
            <donor d_prob="0.893" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72841" g_stop="72544" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="477" r_length="298" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72543" i_stop="72463" i_length="81">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72462" g_stop="72361" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="478" r_stop="579" r_length="102" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-E305675" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E305675" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73944" e_stop="73766"/>
          <exon e_start="72841" e_stop="72544"/>
          <exon e_start="72462" e_stop="72361"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAAACTACAGCTATACCTTCTGCCCCTGCTGCACAAGTGATCGGAAATGCTTTTGTTGAGCAGTATTACCAAATTCAACACCACTCCCCAGAGTTGGTATACAGATTTTGTCTGGATTCAAGTGTCTTAAGCCGCCCAAATTCTAATGGCGTGATGACATCCGTGACAACAATGAAAGTGAGTATAAATGCAATTGTTGTTCCTTCTACTATACCAGAGAACTTTTATGAATAAGGGAAAAAAAACATGGTCTAAAACTCTAAGGCTAATACAAACTTTTATCTGCTGTCGGTTTATCAACATCATAGGTGTTAGTTCACAATGAGAGTTTCACCCCTTCTAAATCGTGTGATCTCCTGGAAACTTCTGTTTTGGGGGGGGGTGGGGGTGGTTAAGTTTGGTGGAAGTCGATAATTGAGGGGCACATTTGAGGACTTTTTCCATAGAAGAAACTGATTGTATAATGCTGAATATAATCTGACCTGCTATTAGTGAAGAACTTAGTTGCATCTGGATGTGGAAGCACAGGGAATTGGACAAATGATAAACTACGTAGAGGACTATAGACTCTTAGTCTTACTTTGGCGTTGGTTAATGATTGACAATAAGAATGAAAATCAACCACATAAATAGAGCAATTAAACTGCTGGGCTTGTGCAGTTGCAAGTCACTTTTAGAAATTATTAAGATGTATGAACATATCGCGAAACCTGTCAACCCTACAATATCTTGAAATAATAAGGTTCTTGGTTTGTAGCTTCAAAGCTAGTGTTTAAATGATTTGCAAGAAATTTCTTTTCGAGAAAATTGGAACTCTATTTAATATTCTAATACAATTCAGAATGATCTTGCGATTATGATGTAACATTCAGAAACTTGCATTCTCTGGGAGAGTTGTGTTATCATTTCTCTAAAGTTTTACCATTAGAAGTAGTTGGCAAAATGGTGAAGTGCTTTCTCTATTTCTTACCTTGCACCATGTTCACATATTTATCTTGGCAAGTTTGCAATATAAAATAACAATTGATTTCTCATTCCACAATTCTGACTAATTTTCACTTATCTTTAACTGATTTTTCACTTATCTTTATGTTGGATCAGAATATCAATGACATGATATGCTCATTAGGCTACAAGAATTATAAGGCAGAGATAAAGACTGCAGATGCACAACAGTCCTACAAGGATGGGGTCATTGTATTGGTTACTGGATGCTTAACTGGAAAAGATAACACGAGAAAGCAATTCACCCAGACTTTTTTCCTTGCTCCACAGGACAAAGGCTACTTTGTTTTGAATGATGTTCTTAGGTATGCAGAACAAGTGGAGACTGATAACAGTTCAGAAATGGTTAATGCGGTCAAGGATGTAGCACCCGTGCCTTTGACGCCTGATCCAGGTTGGATATTTTGTCTAATTCCACACTTTTCTTCTTTTTACTTTTCAAATTGCTTACTTGGCTTTTTTGTTTTGATTCTAGAACCAGTTCATGTGCTTCAGCCTTCGAATCACAGACAGCCTAGCTCTCATGCAGAAGATATAAAAATTGTTGAGGAAGTAGTTCATGGTTCTTTGGAAAATG</genome_strand>
        <mrna_strand>TGGAAACTACAGCTATACCTTCTGCCCCTGCTGCACAAGTGATCGGAAATGCTTTTGTTGAGCAGTATTACCAAATTCAACACCACTCCCCAGAGTTGGTATACAGATTTTGTCTGGATTCAAGTGTCTTAAGCCGCCCAAATTCTAATGGCGTGATGACATCCGTGACAACAATGAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATCAATGACATGATATGCTCATTAGGCTACAAGAATTATAAGGCAGAGATAAAGACTGCAGATGCACAACAGTCCTACAAGGATGGGGTCATTGTATTGGTTACTGGATGCTTAACTGGAAAAGATAACACGAGAAAGCAATTCACCCAGACTTTTTTCCTTGCTCCACAGGACAAAGGCTACTTTGTTTTGAATGATGTTCTTAGGTATGCAGAACAAGTGGAGACTGATAACAGTTCAGAAATGGTTAATGCGGTCAAGGATGTAGCACCCGTGCCTTTGACGCCTGATCCAG.................................................................................AACCAGTTCATGTGCTTCAGCCTTCGAATCACAGACAGCCTAGCTCTCATGCAGAAGATATAAAAATTGTTGAGGAAGTAGTTCATGGTTCTTTGGAAAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E306956" ref_strand="+" ref_description="SGN-E306956 [cLEY-11-B9]">
      <seq>aaactacagctataccttctgcccctgctgcacaagtgagcggaaatgcttttgttgagcagtattaccaaattcaacaccactccccagagttggtatacagattttgtctggattcaagtgtcttaagccgcccaaattctaatggcgtgatgacatccgtgacaacaatgaaaaatatcaatgacatgatatgctcattaggctacaagaattataaggcagagataaagactgcagatgcacaacagtcctacaaggatggggtcattgtattggttactggatgcttaactggaaaagataacacgagaaagcaattcacccagacttttttccttgctccacaggacaaaggctactttgttttgaatgatgttcttaggtatgcagaacaagtggagactgataacagttcagaaatggttaatgcggtcaaggatgtagcacccgtgcctttgacgcctgatccagaaccagttcatgtgcttcagccttcgaatcacagacagcctagctctcatgcagaagatataaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="74241" stop="72096"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73941" g_stop="73766" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="176" r_length="176" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73765" i_stop="72842" i_length="924">
            <donor d_prob="0.893" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72841" g_stop="72544" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="474" r_length="298" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72543" i_stop="72463" i_length="81">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72462" g_stop="72396" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="475" r_stop="541" r_length="67" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-E306956" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>541</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E306956" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73941" e_stop="73766"/>
          <exon e_start="72841" e_stop="72544"/>
          <exon e_start="72462" e_stop="72396"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACTACAGCTATACCTTCTGCCCCTGCTGCACAAGTGATCGGAAATGCTTTTGTTGAGCAGTATTACCAAATTCAACACCACTCCCCAGAGTTGGTATACAGATTTTGTCTGGATTCAAGTGTCTTAAGCCGCCCAAATTCTAATGGCGTGATGACATCCGTGACAACAATGAAAGTGAGTATAAATGCAATTGTTGTTCCTTCTACTATACCAGAGAACTTTTATGAATAAGGGAAAAAAAACATGGTCTAAAACTCTAAGGCTAATACAAACTTTTATCTGCTGTCGGTTTATCAACATCATAGGTGTTAGTTCACAATGAGAGTTTCACCCCTTCTAAATCGTGTGATCTCCTGGAAACTTCTGTTTTGGGGGGGGGTGGGGGTGGTTAAGTTTGGTGGAAGTCGATAATTGAGGGGCACATTTGAGGACTTTTTCCATAGAAGAAACTGATTGTATAATGCTGAATATAATCTGACCTGCTATTAGTGAAGAACTTAGTTGCATCTGGATGTGGAAGCACAGGGAATTGGACAAATGATAAACTACGTAGAGGACTATAGACTCTTAGTCTTACTTTGGCGTTGGTTAATGATTGACAATAAGAATGAAAATCAACCACATAAATAGAGCAATTAAACTGCTGGGCTTGTGCAGTTGCAAGTCACTTTTAGAAATTATTAAGATGTATGAACATATCGCGAAACCTGTCAACCCTACAATATCTTGAAATAATAAGGTTCTTGGTTTGTAGCTTCAAAGCTAGTGTTTAAATGATTTGCAAGAAATTTCTTTTCGAGAAAATTGGAACTCTATTTAATATTCTAATACAATTCAGAATGATCTTGCGATTATGATGTAACATTCAGAAACTTGCATTCTCTGGGAGAGTTGTGTTATCATTTCTCTAAAGTTTTACCATTAGAAGTAGTTGGCAAAATGGTGAAGTGCTTTCTCTATTTCTTACCTTGCACCATGTTCACATATTTATCTTGGCAAGTTTGCAATATAAAATAACAATTGATTTCTCATTCCACAATTCTGACTAATTTTCACTTATCTTTAACTGATTTTTCACTTATCTTTATGTTGGATCAGAATATCAATGACATGATATGCTCATTAGGCTACAAGAATTATAAGGCAGAGATAAAGACTGCAGATGCACAACAGTCCTACAAGGATGGGGTCATTGTATTGGTTACTGGATGCTTAACTGGAAAAGATAACACGAGAAAGCAATTCACCCAGACTTTTTTCCTTGCTCCACAGGACAAAGGCTACTTTGTTTTGAATGATGTTCTTAGGTATGCAGAACAAGTGGAGACTGATAACAGTTCAGAAATGGTTAATGCGGTCAAGGATGTAGCACCCGTGCCTTTGACGCCTGATCCAGGTTGGATATTTTGTCTAATTCCACACTTTTCTTCTTTTTACTTTTCAAATTGCTTACTTGGCTTTTTTGTTTTGATTCTAGAACCAGTTCATGTGCTTCAGCCTTCGAATCACAGACAGCCTAGCTCTCATGCAGAAGATATAAAAAT</genome_strand>
        <mrna_strand>AAACTACAGCTATACCTTCTGCCCCTGCTGCACAAGTGAGCGGAAATGCTTTTGTTGAGCAGTATTACCAAATTCAACACCACTCCCCAGAGTTGGTATACAGATTTTGTCTGGATTCAAGTGTCTTAAGCCGCCCAAATTCTAATGGCGTGATGACATCCGTGACAACAATGAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATCAATGACATGATATGCTCATTAGGCTACAAGAATTATAAGGCAGAGATAAAGACTGCAGATGCACAACAGTCCTACAAGGATGGGGTCATTGTATTGGTTACTGGATGCTTAACTGGAAAAGATAACACGAGAAAGCAATTCACCCAGACTTTTTTCCTTGCTCCACAGGACAAAGGCTACTTTGTTTTGAATGATGTTCTTAGGTATGCAGAACAAGTGGAGACTGATAACAGTTCAGAAATGGTTAATGCGGTCAAGGATGTAGCACCCGTGCCTTTGACGCCTGATCCAG.................................................................................AACCAGTTCATGTGCTTCAGCCTTCGAATCACAGACAGCCTAGCTCTCATGCAGAAGATATAAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E201888" ref_strand="+" ref_description="SGN-E201888 [cLEC-18-E23]">
      <seq>aagcttgccgactcctactcatatcgttcactattgaagtttagtttttggcttaattgtcagtccctttcatcggcttaactacataataatagttgcttccgtaaaactcatcaaatctacaaaaatctgtcttcctttcgctttcttctaagtgtctgtctccccatacttgagtcgagggataaggctgcttacacactacataatggctatggaaactacagctataccttctgcccctgctgcacaagtgatcggaaatgcttttgttgagcagtattaccaaattcaacaccactccccagagttggtatacagattttgtctggattcaagtgtcttaagccgcccaaattctaatggcgtgatgacatccgtgacaacaatgaaaaatatcaatgacatgatatgctcattaggctacaagaattataaggcagagataaagactgcagatgcacaacagtcctacaaggatggggtcattgtattggttactggatgcttaactggaaaagataacacgagaaagcaattcacccagacttttttccttgctccacaggacaaaggctactttgttttgaatgatgttcttaggtatgcaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="75969" stop="72324"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75669" g_stop="75515" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75514" i_stop="74565" i_length="950">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74564" g_stop="74513" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="207" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74512" i_stop="73953" i_length="560">
            <donor d_prob="0.330" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73952" g_stop="73766" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="208" r_stop="394" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="73765" i_stop="72842" i_length="924">
            <donor d_prob="0.893" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="72841" g_stop="72624" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="612" r_length="218" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-E201888" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E201888" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75669" e_stop="75515"/>
          <exon e_start="74564" e_stop="74513"/>
          <exon e_start="73952" e_stop="73766"/>
          <exon e_start="72841" e_stop="72624"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTTGCCGACTCCTACTCATATCGTTCACTATTGAAGTTTAGTTTTTGGCTTAATTGTCAGTCCCTTTCATCGGCTTAACTACATAATAATAGTTGCTTCCGTAAAACTCATCAAATCTACAAAAATCTGTCTTCCTTTCGCTTTCTTCTAAGGTAATTTTCTTCATTAATTTGTTAATGATTTGTTTAATCACACTTTAACTTTCTATTTAATTTAATATTAGTATACTATCTAATCTACAATGGACAGTTATCCCATCACACATCACAATTTTTCTTCTTTCCAGTTCAAATTTTGTTCTGTTTCATCTTGATCAGCGTTTTATTCTTAATCACGATGAATATCCAATTTATTTTTTTACTTATTTTAATAAATCCTGTTTGATTGGAATGTGGCGAATTAATCGATTGATTTATTGTTGTTGGGACTGTTTGGTTTTTTATTGTGAGAGAATGGAAAACTGAAGGCAGATCTGTAAATTTTGCAATTTTGAGTTCTTCCAACATTAATACATGAAGAAAAAAATGTAACTTTACCTAGTCGAACACATTGATTTCTCAGAACGGTTAATGCTGTGTGAGGCAGATTCGGGATTTAAAGTCGATTGTTCATACAATAATACTTAATAATAGTTTGATTCATATAGTCAGAAAAATAATACATATTTTGTGAATTTTTTAATACAAATACACTGTGGAACATAAGCTATTGGGTTCACGTGGACCCTTACCTCTTATAGGTAGGTTCCCCTGGCTCTGTAGTGCCATTCGTCCTCAATGCTACTGCTAGTTCTTTTGTTTTTGTTGATTTGTATGATTTAATTTGATTAAATTTTTGTTTTTTTTTTGAGTGTGGTCGTCATCGTCCATCTAATGTAGTCTTTTATCTTTATAGCTTCAAGAGAAGCTTTGTTTTAATTTTTACAAAAGTTCTCATCGCTAAAAGATCTATGTAGGAAATACCAATTAGTTTGGGCTATATTTTGTTATGTTAGTACTTGTGTTTTACGCCTTATGATTTCTACAACTTTTTAGCTCTGTCGAAGATTTTTATGCCACTATAGTATTTTTATATTTTTTTTTAATCTTTCTTATTATTGCAGTGTCTGTCTCCCCATACTTGAGTCGAGGGATAAGGCTGCTTACACACTACATGTGGGACTACGCTGGATTTATTGTTGTTATATAATTGTTAGTCTAAGATAGTACCGTATTTATAACACTGACCCCAACTTGTTTGTGATTGAGGTGTTGTCATCAGAACTTTTATTGACCGGAAAAGAATTTGTTTCTGAAGATGCATTCTTCTGACCTTCTATGTTGTTGCTTTTAGGGCTCAATGAGTCCACCTTAGGACTAACTTTTCCTTTTCTGTAATTAAGTCTTTTATTGTCTTTTGTGTTATCTGATTTGGGAAATATCTGTATGTTAACATGGATTACTTATTGACTTTTGTGTTATCTAATTTGGGATTTAATATGTGTATGTTAACATGGATGATTTCTCAACCTCAACCCTTGATTAGTTTCTTCTTAGTAATGTTGCTCTATTACTTCAGACTATGAACTACTATGTTGTGCTTCTTTTTTCCTTGGACGAACATGCTTTGTGATGCATATTTTTGTCAAACTATTACTTTTTTACTTGTACACATTACACATCAGGGCTGGTCTTTTACTGACTATTGTCTTGACTCTTCCCTAAATTTTGTACAGAATGGCTATGGAAACTACAGCTATACCTTCTGCCCCTGCTGCACAAGTGATCGGAAATGCTTTTGTTGAGCAGTATTACCAAATTCAACACCACTCCCCAGAGTTGGTATACAGATTTTGTCTGGATTCAAGTGTCTTAAGCCGCCCAAATTCTAATGGCGTGATGACATCCGTGACAACAATGAAAGTGAGTATAAATGCAATTGTTGTTCCTTCTACTATACCAGAGAACTTTTATGAATAAGGGAAAAAAAACATGGTCTAAAACTCTAAGGCTAATACAAACTTTTATCTGCTGTCGGTTTATCAACATCATAGGTGTTAGTTCACAATGAGAGTTTCACCCCTTCTAAATCGTGTGATCTCCTGGAAACTTCTGTTTTGGGGGGGGGTGGGGGTGGTTAAGTTTGGTGGAAGTCGATAATTGAGGGGCACATTTGAGGACTTTTTCCATAGAAGAAACTGATTGTATAATGCTGAATATAATCTGACCTGCTATTAGTGAAGAACTTAGTTGCATCTGGATGTGGAAGCACAGGGAATTGGACAAATGATAAACTACGTAGAGGACTATAGACTCTTAGTCTTACTTTGGCGTTGGTTAATGATTGACAATAAGAATGAAAATCAACCACATAAATAGAGCAATTAAACTGCTGGGCTTGTGCAGTTGCAAGTCACTTTTAGAAATTATTAAGATGTATGAACATATCGCGAAACCTGTCAACCCTACAATATCTTGAAATAATAAGGTTCTTGGTTTGTAGCTTCAAAGCTAGTGTTTAAATGATTTGCAAGAAATTTCTTTTCGAGAAAATTGGAACTCTATTTAATATTCTAATACAATTCAGAATGATCTTGCGATTATGATGTAACATTCAGAAACTTGCATTCTCTGGGAGAGTTGTGTTATCATTTCTCTAAAGTTTTACCATTAGAAGTAGTTGGCAAAATGGTGAAGTGCTTTCTCTATTTCTTACCTTGCACCATGTTCACATATTTATCTTGGCAAGTTTGCAATATAAAATAACAATTGATTTCTCATTCCACAATTCTGACTAATTTTCACTTATCTTTAACTGATTTTTCACTTATCTTTATGTTGGATCAGAATATCAATGACATGATATGCTCATTAGGCTACAAGAATTATAAGGCAGAGATAAAGACTGCAGATGCACAACAGTCCTACAAGGATGGGGTCATTGTATTGGTTACTGGATGCTTAACTGGAAAAGATAACACGAGAAAGCAATTCACCCAGACTTTTTTCCTTGCTCCACAGGACAAAGGCTACTTTGTTTTGAATGATGTTCTTAGGTATGCAGA</genome_strand>
        <mrna_strand>AAGCTTGCCGACTCCTACTCATATCGTTCACTATTGAAGTTTAGTTTTTGGCTTAATTGTCAGTCCCTTTCATCGGCTTAACTACATAATAATAGTTGCTTCCGTAAAACTCATCAAATCTACAAAAATCTGTCTTCCTTTCGCTTTCTTCTAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCTCCCCATACTTGAGTCGAGGGATAAGGCTGCTTACACACTACAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGCTATGGAAACTACAGCTATACCTTCTGCCCCTGCTGCACAAGTGATCGGAAATGCTTTTGTTGAGCAGTATTACCAAATTCAACACCACTCCCCAGAGTTGGTATACAGATTTTGTCTGGATTCAAGTGTCTTAAGCCGCCCAAATTCTAATGGCGTGATGACATCCGTGACAACAATGAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATCAATGACATGATATGCTCATTAGGCTACAAGAATTATAAGGCAGAGATAAAGACTGCAGATGCACAACAGTCCTACAAGGATGGGGTCATTGTATTGGTTACTGGATGCTTAACTGGAAAAGATAACACGAGAAAGCAATTCACCCAGACTTTTTTCCTTGCTCCACAGGACAAAGGCTACTTTGTTTTGAATGATGTTCTTAGGTATGCAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E713166" ref_strand="+" ref_description="SGN-E713166 [FB06DF03]">
      <seq>aaaatgagcaaggcgatttaggtccaattatccctacccaatttgaagacataacattaaaccgcaaaatcaaacagatctcattgagcaaatttcttcaatggcttcgtcagggaaatcgatgatccaaaccctaaaacggttcatgaagaagccatgggagttcaccggacctcaaacaagccccgagtatttagactctatacccaaggcagcggagtacagaatcttctgtcctgccactacccaatctcaggccatcatccccacatccgatcctgaaaccgtcttcgatatcaagtattattctcgtgaccagaggcgtaaccgtcctccaatcaagcgcactttcctcaccaaagctgatgttgagaagatgaggatggagtacaaatttgatgtcaacgattttcctaagccttatttgactgctaaggttgaagaggatgaaaatgctattggtggtggctaccagaaatgaaggctttgttcttgtggcgaagactccacttgctgtcaataatggtagctgatgatgttttgcagtgtcagccaagtgtattgcatatgtactccgttttttaaaaatgttgagatatatattcttggagcaatttcctttggttttagagtgataagtttcaccagtcgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="79650" stop="84699"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79950" g_stop="80432" g_length="483"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="483" r_length="483" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80433" i_stop="84226" i_length="3794">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84227" g_stop="84405" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="662" r_length="179" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E713166" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E713166" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79950" e_stop="80432"/>
          <exon e_start="84227" e_stop="84405"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGAGCAAGGCGATTTAGGTCCAATTATCCCTACCCAATTTGAAGACATAACATTAAACCGCAAAATCAAACAGATCTCATTGAGCAAATTTCTTCAATGGCTTCGTCAGGGAAATCGATGATCCAAACCCTAAAACGGTTCATGAAGAAGCCATGGGAGTTCACCGGACCTCAAACAAGCCCCGAGTATTTAGACTCTATACCCAAGGCAGCGGAGTACAGAATCTTCTGTCCTGCCACTACCCAATCTCAGGCCATCATCCCCACATCCGATCCTGAAACCGTCTTCGATATCAAGTATTATTCTCGTGACCAGAGGCGTAACCGTCCTCCAATCAAGCGCACTTTCCTCACCAAAGCTGATGTTGAGAAGATGAGGATGGAGTACAAATTTGATGTCAACGATTTTCCTAAGCCTTATTTGACTGCTAAGGTTGAAGAGGATGAAAATGCTATTGGTGGTGGCTACCAGAAATGAAGGTAATTTTTTTTATAATAATAATTGGGGTAGATGAACGAACTGAACTACTAATATTCCTCGAAATGAAGGTATTGTGATTCAATTTTAGGGGTTTTATTATAACCGTTTATCTATCATTGTTGGAAATTGAGTTTGTTATTTGAATAATCAAGCAATCATTATTTCAACCGCATATGCCTTTGTTATCATTGCTTTTGTACTATGTTTTATTTGGACCAATTTCATCCGATACTGATAAGTAATTTGCTTTCAGGGCACATCCAGAGTTCTCTAAGTCCTCATTGTTTCGTATAGATAGTATTTGAGCTGGATAGCTAGTGGTCCGATTTAGGAGGAATGTGGAACTTCTCTTCAATTACAATTGTTGGGGAGTTATCACATTTTTCTTGAATTGGTGTTTTCTTTGGTTCCTTTTCAGTAAAGACTTGTAGACATGTAATCTGAAGATGTTGTGTCCCCACTTGTTTTTAAGTGCTGTGGGTTTGGAGGAAAATGTTTTTTTTTTCATGTAAAAAATATTTCTATATCTTTTTGTGGTGTTTGGTTGATTATGAAAGAAGGTGACATATGGAAGTCATACAAGGTGTAGGATGGTGTATAGCTTGTGTTTGTGTGATATCTTCGAGTACTAAATGTTGAAGACGCTTAAGGGTTAATTGAGACAAGTGATATCATGTAAGAGTTGAGTTAGCTTTGGGAAGGAAATGGAATGTCATTTGATGTTGTAAGCACTTGACGAGATTTTATCTGTTCCCTCCCTCTCCTAGTGGGAAAGTAAAACGGGACGTAGTGGAAACTTTGGTAGCAGTCTGTAATGAGAACGTCAAATAGGTTTCAGAAATATGCTTTTTGGGGCTTACTTGAAATTAGATTAAAGGGAGAACTGTTTAGCTAGGTTTGTGCAATTTGAGAATTATTTTTTTCAGGAATATCTGTTGGGTGTTGGGAGTCTATCACATGAAACACAAGAGGTAAATCTAATCAACACATTGAGCTTCTGTTGCCTCCTTTAGCTGCTTCCTTCCTTGCTGCCCTTCTCAAAACTTAAGTTTTGATGGATGCATCCTCTCTTCTTTCCCTACTGTCATGAGCACCTTTGACCCCTGTTCTAGTTTTTCTTCCGTTTCCTTTTCTAATGTCCTCCCCTCTACGATTGTCTATGTTTCAAATTGGCGGCGAACCCCTACTTTCAACCGATTTAGAAGTTTCAAGTCTTCTCCTTTTTCCTTTTTTTACAGGAGAAAACTCCATATTACAGCAGATAATATTGGTGTTAATATCACCCAATTAAACATTCTGTTCAAAATTAACCACAACTGATACTTTTATCACACAAATAATGTGCTATTACGTGCCCACTTGTGCCTGAAAGACTTTAATTGCAAAAAACTGGCTTCATCTTTGGTATCACTTAATATCTACCCCAAATAGCACTAGTTGATAAGGTTTTGAAAGGGGATTAGCTTATTTTCGTTCTTTTTCCATAACCCGTTTGGGTATGAGTAGTTTGACGTTGTTTTATGCATTTTCTTCTTTTATCTTAAAGCACCAGATCATCTCTTAGTACGAACTAGAAATCATGTAGTGTCTGTTTCTTTGTTTGCTGTGTTGAACCATTGAAGAGGATGATTCAGGTGTGTCAATAGGTAATAGTGAGATAGGTTTGTCAAAATGAGGTTTATTATTCTAGTCAGCTTCTCTAATTTATTAAGAACTGTATAGAAAGTAAAGTTTGTTTTGCTTTCTTCTGATCGCACTAAACAAACATACAAGGGCAGATAAATGCTTTACTAGAGGGAAGTATAGTAATCCGTCCCCTTAGAAAAAGAGCGCAAGCTTTAAATAGCACAAATGGAGAAAAAGTACAAATATGAATTTTTAGTCCAAGACTTGAGATAATAAGCATGAATAACAAATATATGGCCAAAGAAGTTGAAAAAAATATATGGTAGAGTCAAAAGTGATATATCAATTGTTTAGTGTGACCGAGGCGCTTATTGGTAAGGAAAATATGTCTTAGAGCCTTAATGATGCTGAAGTGCACATCAAGCAATGCAACACGCTTAGCATATTTTGCGTCTCGCTTCAGTGCTTATGTGCGTCTTTGACAACACTGGGTCAGTTAAAAACAAATTATCTCGATGTATTTTTATAAACATGCAACTTTTCCTTATAAAAACATTTCATCAATGTTAACATTATAGTTGACATGGCAACTATTCGTTCTGATCAGATTTATAATTTGTTTTACTTAAGCTCAGATCAAGTTGACAGTGTTCTTTTGGGTAGAAAGGAACAGGAAAACTGAATTGGGAACTCTTAAAACTAATGGAACGATAGTAAGTTTTTTTTTTGATGAAATGAGGCATTTCATTGCTGGTATCAATAAAATTCAGAGTTACGAAAACAAGTAGATGATAGCTTCAGTAAAAAAAAACTAATAAATGGTAAAAGTTCTGTTTCATGCTAACAGGGTACATAGCTAGAATTGTCATATTTCAAAATGGTTGCGTCTTGATCTCTTTGTCTATGTAACTATGTAAATATAGTTATGTCCTTTAACTTCTGTTGATACTCGTCTAGATTAAAGTAGCCATTGAGATCTTTAAGGTACTTGAGAGTTATAAATTACAATTGGTTTGAGATAATGAACATATGAGAACCATGATAGAGTCGTTGTGATGGGATTGTGGTGTTATTTAATTTGTATAACTTGTCTGAAAAATTGCCATGCTATTTTCATTCTATAGCTAGTTTCTAGGAGATGATGAAAAAAGAGCAAACCAGCTGAAAGTATGTCTAGAATCCATGCTTGGTGGTGTTCTTAGGTTGAGGCAAGCAATGCAATAAACTAGGAACATTCACAGAATGTTGTGAGTGGTTTTAGCCCTCCAAGCCGTAAAATCTATTGTCCTTTTAGTTGTGTAAATGAGCTAAGCCAATCCTAACATTAGTCGGGTTCAGCTCACTTGGTGCATTAAGAGATGAGCTGAAGGTTGAGTCTAATCAAGCCCGAGCGCAAGACAGTCGGTTCAGTTTCTTTTTTTGGTTGATAACGGTGGTGTGAATCGTGTGATGTCGGGGCCAGCTTTCATGCACCTCGGTGTTGGGTCTGAGCTAAATATCTGCTCTGCAGGATGGTTAGCTTTTATCACAAACATTAATAACTATTACCCAAACTAGAAATGTTAAAAATAATGAAGACAACCTTAACAAAAATAATTATACGACTCTCATGTTTGGAAATGAGTTCTGCAAAGTGTTAACATATCCTTAAATCTTTAAACAATTGAAAAAATAGAAATAAATGCAATGCATCTGATGCTGAAATAAGACTCTGGATTTGTTGCATTTGTCTAATATCTGAGTCCATGAGAGATATAAAGGATGCTGGAGATAAGTAGGAGGGTTGTTTTATTACTAGCAATATATCTGTGCTAATTGTGCATCTGATTTTGATCTTAGGCCAATTAATGAGATAACTTTGGGATATTCCATAAAGTGAAGCTTATCTGCATTTTATAGCGACACCTTTTCATACATTTAATCCCCTGTTTAGTATTTGAATGGTCAAAGGATGACTAATTGTGCATAGAAATTATCTTTGCAGTTCCGGTAACAAAGAAAAAAAAGTGTTAGCTGCTGTAGCACCCCACAAAATGGAAAGAAGTAGTTTTTTTTTAATCTTTTCAAAACTGCTGTTTCTTTTATCGTCTTGGAGATATCAATTTGTTAACTGTGTGTTGATATTATCATATACAAATTCTAACTATTTGAACTCCCTCTCTACCAGGCTTTGTTCTTGTGGCGAAGACTCCACTTGCTGTCAATAATGGTAGCTGATGATGTTTTGCAGTGTCAGCCAAGTGTATTGCATATGTACTCCGTTTTTTAAAAATGTTGAGATATATATTCTTGGAGCAATTTCCTTTGGTTTTAGAGTGATAAGTTTCACCAGTCGAATAATTTTTT</genome_strand>
        <mrna_strand>AAAATGAGCAAGGCGATTTAGGTCCAATTATCCCTACCCAATTTGAAGACATAACATTAAACCGCAAAATCAAACAGATCTCATTGAGCAAATTTCTTCAATGGCTTCGTCAGGGAAATCGATGATCCAAACCCTAAAACGGTTCATGAAGAAGCCATGGGAGTTCACCGGACCTCAAACAAGCCCCGAGTATTTAGACTCTATACCCAAGGCAGCGGAGTACAGAATCTTCTGTCCTGCCACTACCCAATCTCAGGCCATCATCCCCACATCCGATCCTGAAACCGTCTTCGATATCAAGTATTATTCTCGTGACCAGAGGCGTAACCGTCCTCCAATCAAGCGCACTTTCCTCACCAAAGCTGATGTTGAGAAGATGAGGATGGAGTACAAATTTGATGTCAACGATTTTCCTAAGCCTTATTTGACTGCTAAGGTTGAAGAGGATGAAAATGCTATTGGTGGTGGCTACCAGAAATGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGTTCTTGTGGCGAAGACTCCACTTGCTGTCAATAATGGTAGCTGATGATGTTTTGCAGTGTCAGCCAAGTGTATTGCATATGTACTCCGTTTTTTAAAAATGTTGAGATATATATTCTTGGAGCAATTTCCTTTGGTTTTAGAGTGATAAGTTTCACCAGTCGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E362305" ref_strand="+" ref_description="SGN-E362305 [cLPP-10-D12]">
      <seq>tctcattgggcaaatttcttcaatggcttcgtcagggaaatcgatgatccaaaccctaaaacggttcatgaagaagccatgggagttcaccggacctcaaacaagccccgagtatttagactctatacccaaggcagcggagtacagaatcttctgtcctgccactacccaatctcaggccatcatccccacatccgatcctgaaaccgtcttcgatatcaagtattattctcgtgaccagaggcgtaaccgtcctccaatcaagcgcaccttcctcaccaaagctgatgttgagaagatgaggatggagtacaaatttgatgtcaacgattttcctaagccttatttgactgctaaggttgaagaggatgaaaatgctattggtggtggctaccagaaatgaaggctttgttcttgtggcgaagactccacttgctgtcaataatggtagctgatgatgttttgcagtttcagccaagtgtattgcaaatgtactcccttttttaaaaatgttgagatataatattcttggagtaatttcctttggttttagagtgaaaagtttcaccagttgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="79728" stop="84699"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80028" g_stop="80432" g_length="405"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="405" r_length="405" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80433" i_stop="84226" i_length="3794">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84227" g_stop="84405" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="585" r_length="180" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E362305" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>584</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E362305" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80028" e_stop="80432"/>
          <exon e_start="84227" e_stop="84405"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCATTGAGCAAATTTCTTCAATGGCTTCGTCAGGGAAATCGATGATCCAAACCCTAAAACGGTTCATGAAGAAGCCATGGGAGTTCACCGGACCTCAAACAAGCCCCGAGTATTTAGACTCTATACCCAAGGCAGCGGAGTACAGAATCTTCTGTCCTGCCACTACCCAATCTCAGGCCATCATCCCCACATCCGATCCTGAAACCGTCTTCGATATCAAGTATTATTCTCGTGACCAGAGGCGTAACCGTCCTCCAATCAAGCGCACTTTCCTCACCAAAGCTGATGTTGAGAAGATGAGGATGGAGTACAAATTTGATGTCAACGATTTTCCTAAGCCTTATTTGACTGCTAAGGTTGAAGAGGATGAAAATGCTATTGGTGGTGGCTACCAGAAATGAAGGTAATTTTTTTTATAATAATAATTGGGGTAGATGAACGAACTGAACTACTAATATTCCTCGAAATGAAGGTATTGTGATTCAATTTTAGGGGTTTTATTATAACCGTTTATCTATCATTGTTGGAAATTGAGTTTGTTATTTGAATAATCAAGCAATCATTATTTCAACCGCATATGCCTTTGTTATCATTGCTTTTGTACTATGTTTTATTTGGACCAATTTCATCCGATACTGATAAGTAATTTGCTTTCAGGGCACATCCAGAGTTCTCTAAGTCCTCATTGTTTCGTATAGATAGTATTTGAGCTGGATAGCTAGTGGTCCGATTTAGGAGGAATGTGGAACTTCTCTTCAATTACAATTGTTGGGGAGTTATCACATTTTTCTTGAATTGGTGTTTTCTTTGGTTCCTTTTCAGTAAAGACTTGTAGACATGTAATCTGAAGATGTTGTGTCCCCACTTGTTTTTAAGTGCTGTGGGTTTGGAGGAAAATGTTTTTTTTTTCATGTAAAAAATATTTCTATATCTTTTTGTGGTGTTTGGTTGATTATGAAAGAAGGTGACATATGGAAGTCATACAAGGTGTAGGATGGTGTATAGCTTGTGTTTGTGTGATATCTTCGAGTACTAAATGTTGAAGACGCTTAAGGGTTAATTGAGACAAGTGATATCATGTAAGAGTTGAGTTAGCTTTGGGAAGGAAATGGAATGTCATTTGATGTTGTAAGCACTTGACGAGATTTTATCTGTTCCCTCCCTCTCCTAGTGGGAAAGTAAAACGGGACGTAGTGGAAACTTTGGTAGCAGTCTGTAATGAGAACGTCAAATAGGTTTCAGAAATATGCTTTTTGGGGCTTACTTGAAATTAGATTAAAGGGAGAACTGTTTAGCTAGGTTTGTGCAATTTGAGAATTATTTTTTTCAGGAATATCTGTTGGGTGTTGGGAGTCTATCACATGAAACACAAGAGGTAAATCTAATCAACACATTGAGCTTCTGTTGCCTCCTTTAGCTGCTTCCTTCCTTGCTGCCCTTCTCAAAACTTAAGTTTTGATGGATGCATCCTCTCTTCTTTCCCTACTGTCATGAGCACCTTTGACCCCTGTTCTAGTTTTTCTTCCGTTTCCTTTTCTAATGTCCTCCCCTCTACGATTGTCTATGTTTCAAATTGGCGGCGAACCCCTACTTTCAACCGATTTAGAAGTTTCAAGTCTTCTCCTTTTTCCTTTTTTTACAGGAGAAAACTCCATATTACAGCAGATAATATTGGTGTTAATATCACCCAATTAAACATTCTGTTCAAAATTAACCACAACTGATACTTTTATCACACAAATAATGTGCTATTACGTGCCCACTTGTGCCTGAAAGACTTTAATTGCAAAAAACTGGCTTCATCTTTGGTATCACTTAATATCTACCCCAAATAGCACTAGTTGATAAGGTTTTGAAAGGGGATTAGCTTATTTTCGTTCTTTTTCCATAACCCGTTTGGGTATGAGTAGTTTGACGTTGTTTTATGCATTTTCTTCTTTTATCTTAAAGCACCAGATCATCTCTTAGTACGAACTAGAAATCATGTAGTGTCTGTTTCTTTGTTTGCTGTGTTGAACCATTGAAGAGGATGATTCAGGTGTGTCAATAGGTAATAGTGAGATAGGTTTGTCAAAATGAGGTTTATTATTCTAGTCAGCTTCTCTAATTTATTAAGAACTGTATAGAAAGTAAAGTTTGTTTTGCTTTCTTCTGATCGCACTAAACAAACATACAAGGGCAGATAAATGCTTTACTAGAGGGAAGTATAGTAATCCGTCCCCTTAGAAAAAGAGCGCAAGCTTTAAATAGCACAAATGGAGAAAAAGTACAAATATGAATTTTTAGTCCAAGACTTGAGATAATAAGCATGAATAACAAATATATGGCCAAAGAAGTTGAAAAAAATATATGGTAGAGTCAAAAGTGATATATCAATTGTTTAGTGTGACCGAGGCGCTTATTGGTAAGGAAAATATGTCTTAGAGCCTTAATGATGCTGAAGTGCACATCAAGCAATGCAACACGCTTAGCATATTTTGCGTCTCGCTTCAGTGCTTATGTGCGTCTTTGACAACACTGGGTCAGTTAAAAACAAATTATCTCGATGTATTTTTATAAACATGCAACTTTTCCTTATAAAAACATTTCATCAATGTTAACATTATAGTTGACATGGCAACTATTCGTTCTGATCAGATTTATAATTTGTTTTACTTAAGCTCAGATCAAGTTGACAGTGTTCTTTTGGGTAGAAAGGAACAGGAAAACTGAATTGGGAACTCTTAAAACTAATGGAACGATAGTAAGTTTTTTTTTTGATGAAATGAGGCATTTCATTGCTGGTATCAATAAAATTCAGAGTTACGAAAACAAGTAGATGATAGCTTCAGTAAAAAAAAACTAATAAATGGTAAAAGTTCTGTTTCATGCTAACAGGGTACATAGCTAGAATTGTCATATTTCAAAATGGTTGCGTCTTGATCTCTTTGTCTATGTAACTATGTAAATATAGTTATGTCCTTTAACTTCTGTTGATACTCGTCTAGATTAAAGTAGCCATTGAGATCTTTAAGGTACTTGAGAGTTATAAATTACAATTGGTTTGAGATAATGAACATATGAGAACCATGATAGAGTCGTTGTGATGGGATTGTGGTGTTATTTAATTTGTATAACTTGTCTGAAAAATTGCCATGCTATTTTCATTCTATAGCTAGTTTCTAGGAGATGATGAAAAAAGAGCAAACCAGCTGAAAGTATGTCTAGAATCCATGCTTGGTGGTGTTCTTAGGTTGAGGCAAGCAATGCAATAAACTAGGAACATTCACAGAATGTTGTGAGTGGTTTTAGCCCTCCAAGCCGTAAAATCTATTGTCCTTTTAGTTGTGTAAATGAGCTAAGCCAATCCTAACATTAGTCGGGTTCAGCTCACTTGGTGCATTAAGAGATGAGCTGAAGGTTGAGTCTAATCAAGCCCGAGCGCAAGACAGTCGGTTCAGTTTCTTTTTTTGGTTGATAACGGTGGTGTGAATCGTGTGATGTCGGGGCCAGCTTTCATGCACCTCGGTGTTGGGTCTGAGCTAAATATCTGCTCTGCAGGATGGTTAGCTTTTATCACAAACATTAATAACTATTACCCAAACTAGAAATGTTAAAAATAATGAAGACAACCTTAACAAAAATAATTATACGACTCTCATGTTTGGAAATGAGTTCTGCAAAGTGTTAACATATCCTTAAATCTTTAAACAATTGAAAAAATAGAAATAAATGCAATGCATCTGATGCTGAAATAAGACTCTGGATTTGTTGCATTTGTCTAATATCTGAGTCCATGAGAGATATAAAGGATGCTGGAGATAAGTAGGAGGGTTGTTTTATTACTAGCAATATATCTGTGCTAATTGTGCATCTGATTTTGATCTTAGGCCAATTAATGAGATAACTTTGGGATATTCCATAAAGTGAAGCTTATCTGCATTTTATAGCGACACCTTTTCATACATTTAATCCCCTGTTTAGTATTTGAATGGTCAAAGGATGACTAATTGTGCATAGAAATTATCTTTGCAGTTCCGGTAACAAAGAAAAAAAAGTGTTAGCTGCTGTAGCACCCCACAAAATGGAAAGAAGTAGTTTTTTTTTAATCTTTTCAAAACTGCTGTTTCTTTTATCGTCTTGGAGATATCAATTTGTTAACTGTGTGTTGATATTATCATATACAAATTCTAACTATTTGAACTCCCTCTCTACCAGGCTTTGTTCTTGTGGCGAAGACTCCACTTGCTGTCAATAATGGTAGCTGATGATGTTTTGCAGTGTCAGCCAAGTGTATTGCATATGTACTCCGTTTTTTAAAAATGTTGAGATAT-ATATTCTTGGAGCAATTTCCTTTGGTTTTAGAGTGATAAGTTTCACCAGTCGAATAATTTTTT</genome_strand>
        <mrna_strand>TCTCATTGGGCAAATTTCTTCAATGGCTTCGTCAGGGAAATCGATGATCCAAACCCTAAAACGGTTCATGAAGAAGCCATGGGAGTTCACCGGACCTCAAACAAGCCCCGAGTATTTAGACTCTATACCCAAGGCAGCGGAGTACAGAATCTTCTGTCCTGCCACTACCCAATCTCAGGCCATCATCCCCACATCCGATCCTGAAACCGTCTTCGATATCAAGTATTATTCTCGTGACCAGAGGCGTAACCGTCCTCCAATCAAGCGCACCTTCCTCACCAAAGCTGATGTTGAGAAGATGAGGATGGAGTACAAATTTGATGTCAACGATTTTCCTAAGCCTTATTTGACTGCTAAGGTTGAAGAGGATGAAAATGCTATTGGTGGTGGCTACCAGAAATGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGTTCTTGTGGCGAAGACTCCACTTGCTGTCAATAATGGTAGCTGATGATGTTTTGCAGTTTCAGCCAAGTGTATTGCAAATGTACTCCCTTTTTTAAAAATGTTGAGATATAATATTCTTGGAGTAATTTCCTTTGGTTTTAGAGTGAAAAGTTTCACCAGTTGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E242747" ref_strand="+" ref_description="SGN-E242747 [cLED-31-G2]">
      <seq>aaatttcttcaatggcttcgtcagggaaatcgatgatccaaaccctaaaacggttcatgaagaagccatgggagttcaccggacctcaaacaagccccgagtatttagactctatacccaaggcagcggagtacagaatcttctgtcctgccactacccaatctcaggccatcatccccacatccgatcctgaaaccgtcttcgatatcaagtattattctcgtgaccagaggcgtaaccgtcctccaatcaagcgcactttcctcaccaaagctgatgttgagaagatgaggatggagtacaaatttgatgtcaacgattttcctaagccttatttgactgctaaggttgaagaggatgaaaatgctattggtggtggctaccagaaatgaaggctttgttcttgtggcgaagactccacttgctgtcaataatggtagctgatgatgttttgcagtgtcagccaagtgtattgcatatgtactccgttttttaaaaatgttgagatatatattcttggagcaatttcctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="79739" stop="84664"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80039" g_stop="80432" g_length="394"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="394" r_length="394" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80433" i_stop="84226" i_length="3794">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84227" g_stop="84364" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="532" r_length="138" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E242747" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E242747" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80039" e_stop="80432"/>
          <exon e_start="84227" e_stop="84364"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTTCTTCAATGGCTTCGTCAGGGAAATCGATGATCCAAACCCTAAAACGGTTCATGAAGAAGCCATGGGAGTTCACCGGACCTCAAACAAGCCCCGAGTATTTAGACTCTATACCCAAGGCAGCGGAGTACAGAATCTTCTGTCCTGCCACTACCCAATCTCAGGCCATCATCCCCACATCCGATCCTGAAACCGTCTTCGATATCAAGTATTATTCTCGTGACCAGAGGCGTAACCGTCCTCCAATCAAGCGCACTTTCCTCACCAAAGCTGATGTTGAGAAGATGAGGATGGAGTACAAATTTGATGTCAACGATTTTCCTAAGCCTTATTTGACTGCTAAGGTTGAAGAGGATGAAAATGCTATTGGTGGTGGCTACCAGAAATGAAGGTAATTTTTTTTATAATAATAATTGGGGTAGATGAACGAACTGAACTACTAATATTCCTCGAAATGAAGGTATTGTGATTCAATTTTAGGGGTTTTATTATAACCGTTTATCTATCATTGTTGGAAATTGAGTTTGTTATTTGAATAATCAAGCAATCATTATTTCAACCGCATATGCCTTTGTTATCATTGCTTTTGTACTATGTTTTATTTGGACCAATTTCATCCGATACTGATAAGTAATTTGCTTTCAGGGCACATCCAGAGTTCTCTAAGTCCTCATTGTTTCGTATAGATAGTATTTGAGCTGGATAGCTAGTGGTCCGATTTAGGAGGAATGTGGAACTTCTCTTCAATTACAATTGTTGGGGAGTTATCACATTTTTCTTGAATTGGTGTTTTCTTTGGTTCCTTTTCAGTAAAGACTTGTAGACATGTAATCTGAAGATGTTGTGTCCCCACTTGTTTTTAAGTGCTGTGGGTTTGGAGGAAAATGTTTTTTTTTTCATGTAAAAAATATTTCTATATCTTTTTGTGGTGTTTGGTTGATTATGAAAGAAGGTGACATATGGAAGTCATACAAGGTGTAGGATGGTGTATAGCTTGTGTTTGTGTGATATCTTCGAGTACTAAATGTTGAAGACGCTTAAGGGTTAATTGAGACAAGTGATATCATGTAAGAGTTGAGTTAGCTTTGGGAAGGAAATGGAATGTCATTTGATGTTGTAAGCACTTGACGAGATTTTATCTGTTCCCTCCCTCTCCTAGTGGGAAAGTAAAACGGGACGTAGTGGAAACTTTGGTAGCAGTCTGTAATGAGAACGTCAAATAGGTTTCAGAAATATGCTTTTTGGGGCTTACTTGAAATTAGATTAAAGGGAGAACTGTTTAGCTAGGTTTGTGCAATTTGAGAATTATTTTTTTCAGGAATATCTGTTGGGTGTTGGGAGTCTATCACATGAAACACAAGAGGTAAATCTAATCAACACATTGAGCTTCTGTTGCCTCCTTTAGCTGCTTCCTTCCTTGCTGCCCTTCTCAAAACTTAAGTTTTGATGGATGCATCCTCTCTTCTTTCCCTACTGTCATGAGCACCTTTGACCCCTGTTCTAGTTTTTCTTCCGTTTCCTTTTCTAATGTCCTCCCCTCTACGATTGTCTATGTTTCAAATTGGCGGCGAACCCCTACTTTCAACCGATTTAGAAGTTTCAAGTCTTCTCCTTTTTCCTTTTTTTACAGGAGAAAACTCCATATTACAGCAGATAATATTGGTGTTAATATCACCCAATTAAACATTCTGTTCAAAATTAACCACAACTGATACTTTTATCACACAAATAATGTGCTATTACGTGCCCACTTGTGCCTGAAAGACTTTAATTGCAAAAAACTGGCTTCATCTTTGGTATCACTTAATATCTACCCCAAATAGCACTAGTTGATAAGGTTTTGAAAGGGGATTAGCTTATTTTCGTTCTTTTTCCATAACCCGTTTGGGTATGAGTAGTTTGACGTTGTTTTATGCATTTTCTTCTTTTATCTTAAAGCACCAGATCATCTCTTAGTACGAACTAGAAATCATGTAGTGTCTGTTTCTTTGTTTGCTGTGTTGAACCATTGAAGAGGATGATTCAGGTGTGTCAATAGGTAATAGTGAGATAGGTTTGTCAAAATGAGGTTTATTATTCTAGTCAGCTTCTCTAATTTATTAAGAACTGTATAGAAAGTAAAGTTTGTTTTGCTTTCTTCTGATCGCACTAAACAAACATACAAGGGCAGATAAATGCTTTACTAGAGGGAAGTATAGTAATCCGTCCCCTTAGAAAAAGAGCGCAAGCTTTAAATAGCACAAATGGAGAAAAAGTACAAATATGAATTTTTAGTCCAAGACTTGAGATAATAAGCATGAATAACAAATATATGGCCAAAGAAGTTGAAAAAAATATATGGTAGAGTCAAAAGTGATATATCAATTGTTTAGTGTGACCGAGGCGCTTATTGGTAAGGAAAATATGTCTTAGAGCCTTAATGATGCTGAAGTGCACATCAAGCAATGCAACACGCTTAGCATATTTTGCGTCTCGCTTCAGTGCTTATGTGCGTCTTTGACAACACTGGGTCAGTTAAAAACAAATTATCTCGATGTATTTTTATAAACATGCAACTTTTCCTTATAAAAACATTTCATCAATGTTAACATTATAGTTGACATGGCAACTATTCGTTCTGATCAGATTTATAATTTGTTTTACTTAAGCTCAGATCAAGTTGACAGTGTTCTTTTGGGTAGAAAGGAACAGGAAAACTGAATTGGGAACTCTTAAAACTAATGGAACGATAGTAAGTTTTTTTTTTGATGAAATGAGGCATTTCATTGCTGGTATCAATAAAATTCAGAGTTACGAAAACAAGTAGATGATAGCTTCAGTAAAAAAAAACTAATAAATGGTAAAAGTTCTGTTTCATGCTAACAGGGTACATAGCTAGAATTGTCATATTTCAAAATGGTTGCGTCTTGATCTCTTTGTCTATGTAACTATGTAAATATAGTTATGTCCTTTAACTTCTGTTGATACTCGTCTAGATTAAAGTAGCCATTGAGATCTTTAAGGTACTTGAGAGTTATAAATTACAATTGGTTTGAGATAATGAACATATGAGAACCATGATAGAGTCGTTGTGATGGGATTGTGGTGTTATTTAATTTGTATAACTTGTCTGAAAAATTGCCATGCTATTTTCATTCTATAGCTAGTTTCTAGGAGATGATGAAAAAAGAGCAAACCAGCTGAAAGTATGTCTAGAATCCATGCTTGGTGGTGTTCTTAGGTTGAGGCAAGCAATGCAATAAACTAGGAACATTCACAGAATGTTGTGAGTGGTTTTAGCCCTCCAAGCCGTAAAATCTATTGTCCTTTTAGTTGTGTAAATGAGCTAAGCCAATCCTAACATTAGTCGGGTTCAGCTCACTTGGTGCATTAAGAGATGAGCTGAAGGTTGAGTCTAATCAAGCCCGAGCGCAAGACAGTCGGTTCAGTTTCTTTTTTTGGTTGATAACGGTGGTGTGAATCGTGTGATGTCGGGGCCAGCTTTCATGCACCTCGGTGTTGGGTCTGAGCTAAATATCTGCTCTGCAGGATGGTTAGCTTTTATCACAAACATTAATAACTATTACCCAAACTAGAAATGTTAAAAATAATGAAGACAACCTTAACAAAAATAATTATACGACTCTCATGTTTGGAAATGAGTTCTGCAAAGTGTTAACATATCCTTAAATCTTTAAACAATTGAAAAAATAGAAATAAATGCAATGCATCTGATGCTGAAATAAGACTCTGGATTTGTTGCATTTGTCTAATATCTGAGTCCATGAGAGATATAAAGGATGCTGGAGATAAGTAGGAGGGTTGTTTTATTACTAGCAATATATCTGTGCTAATTGTGCATCTGATTTTGATCTTAGGCCAATTAATGAGATAACTTTGGGATATTCCATAAAGTGAAGCTTATCTGCATTTTATAGCGACACCTTTTCATACATTTAATCCCCTGTTTAGTATTTGAATGGTCAAAGGATGACTAATTGTGCATAGAAATTATCTTTGCAGTTCCGGTAACAAAGAAAAAAAAGTGTTAGCTGCTGTAGCACCCCACAAAATGGAAAGAAGTAGTTTTTTTTTAATCTTTTCAAAACTGCTGTTTCTTTTATCGTCTTGGAGATATCAATTTGTTAACTGTGTGTTGATATTATCATATACAAATTCTAACTATTTGAACTCCCTCTCTACCAGGCTTTGTTCTTGTGGCGAAGACTCCACTTGCTGTCAATAATGGTAGCTGATGATGTTTTGCAGTGTCAGCCAAGTGTATTGCATATGTACTCCGTTTTTTAAAAATGTTGAGATATATATTCTTGGAGCAATTTCCTT</genome_strand>
        <mrna_strand>AAATTTCTTCAATGGCTTCGTCAGGGAAATCGATGATCCAAACCCTAAAACGGTTCATGAAGAAGCCATGGGAGTTCACCGGACCTCAAACAAGCCCCGAGTATTTAGACTCTATACCCAAGGCAGCGGAGTACAGAATCTTCTGTCCTGCCACTACCCAATCTCAGGCCATCATCCCCACATCCGATCCTGAAACCGTCTTCGATATCAAGTATTATTCTCGTGACCAGAGGCGTAACCGTCCTCCAATCAAGCGCACTTTCCTCACCAAAGCTGATGTTGAGAAGATGAGGATGGAGTACAAATTTGATGTCAACGATTTTCCTAAGCCTTATTTGACTGCTAAGGTTGAAGAGGATGAAAATGCTATTGGTGGTGGCTACCAGAAATGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGTTCTTGTGGCGAAGACTCCACTTGCTGTCAATAATGGTAGCTGATGATGTTTTGCAGTGTCAGCCAAGTGTATTGCATATGTACTCCGTTTTTTAAAAATGTTGAGATATATATTCTTGGAGCAATTTCCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E712325" ref_strand="+" ref_description="SGN-E712325 [FB04CB08]">
      <seq>gaggcgtcagggaaatcgatgatccaaaccctaaaacggttcatgaagaagccatgggagttcaccggacctcaaacaagccccgagtatttagactctatacccaaggcagcggagtacagaatcttctgtcctgccactacccaatctcaggccatcatccccacatccgatcctgaaaccgtcttcgatatcaagtattattctcgtgaccagaggcgtaaccgtcctccaatcaagcgcactttcctcaccaaagctgatgttgagaagatgaggatggagtacaaatttgatgtcaacgattttcctaagccttatttgactgctaaggttgaagaggatgaaaatgctattggtggtggctaccagaaatgaaggctttgttcttgtggcgaagactccacttgctgtcaataatggtagctgatgatgttttgcagtgtcagccaagtgtattgcatatgtactccgttttttaaaaatgttgagatatatattcttggagcaatttcctttggttttagagtgataagtttcaccagtcgaataattttttttttcatttagcttatgcggattgttccatgtcttgtgcttgaaagagtgaaagttagtcgaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="79757" stop="84768"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80053" g_stop="80432" g_length="380"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="380" r_length="380" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80433" i_stop="84226" i_length="3794">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84227" g_stop="84469" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="623" r_length="243" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="624" polyA_stop="645"/>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E712325" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>623</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E712325" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80053" e_stop="80432"/>
          <exon e_start="84227" e_stop="84469"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTCGTCAGGGAAATCGATGATCCAAACCCTAAAACGGTTCATGAAGAAGCCATGGGAGTTCACCGGACCTCAAACAAGCCCCGAGTATTTAGACTCTATACCCAAGGCAGCGGAGTACAGAATCTTCTGTCCTGCCACTACCCAATCTCAGGCCATCATCCCCACATCCGATCCTGAAACCGTCTTCGATATCAAGTATTATTCTCGTGACCAGAGGCGTAACCGTCCTCCAATCAAGCGCACTTTCCTCACCAAAGCTGATGTTGAGAAGATGAGGATGGAGTACAAATTTGATGTCAACGATTTTCCTAAGCCTTATTTGACTGCTAAGGTTGAAGAGGATGAAAATGCTATTGGTGGTGGCTACCAGAAATGAAGGTAATTTTTTTTATAATAATAATTGGGGTAGATGAACGAACTGAACTACTAATATTCCTCGAAATGAAGGTATTGTGATTCAATTTTAGGGGTTTTATTATAACCGTTTATCTATCATTGTTGGAAATTGAGTTTGTTATTTGAATAATCAAGCAATCATTATTTCAACCGCATATGCCTTTGTTATCATTGCTTTTGTACTATGTTTTATTTGGACCAATTTCATCCGATACTGATAAGTAATTTGCTTTCAGGGCACATCCAGAGTTCTCTAAGTCCTCATTGTTTCGTATAGATAGTATTTGAGCTGGATAGCTAGTGGTCCGATTTAGGAGGAATGTGGAACTTCTCTTCAATTACAATTGTTGGGGAGTTATCACATTTTTCTTGAATTGGTGTTTTCTTTGGTTCCTTTTCAGTAAAGACTTGTAGACATGTAATCTGAAGATGTTGTGTCCCCACTTGTTTTTAAGTGCTGTGGGTTTGGAGGAAAATGTTTTTTTTTTCATGTAAAAAATATTTCTATATCTTTTTGTGGTGTTTGGTTGATTATGAAAGAAGGTGACATATGGAAGTCATACAAGGTGTAGGATGGTGTATAGCTTGTGTTTGTGTGATATCTTCGAGTACTAAATGTTGAAGACGCTTAAGGGTTAATTGAGACAAGTGATATCATGTAAGAGTTGAGTTAGCTTTGGGAAGGAAATGGAATGTCATTTGATGTTGTAAGCACTTGACGAGATTTTATCTGTTCCCTCCCTCTCCTAGTGGGAAAGTAAAACGGGACGTAGTGGAAACTTTGGTAGCAGTCTGTAATGAGAACGTCAAATAGGTTTCAGAAATATGCTTTTTGGGGCTTACTTGAAATTAGATTAAAGGGAGAACTGTTTAGCTAGGTTTGTGCAATTTGAGAATTATTTTTTTCAGGAATATCTGTTGGGTGTTGGGAGTCTATCACATGAAACACAAGAGGTAAATCTAATCAACACATTGAGCTTCTGTTGCCTCCTTTAGCTGCTTCCTTCCTTGCTGCCCTTCTCAAAACTTAAGTTTTGATGGATGCATCCTCTCTTCTTTCCCTACTGTCATGAGCACCTTTGACCCCTGTTCTAGTTTTTCTTCCGTTTCCTTTTCTAATGTCCTCCCCTCTACGATTGTCTATGTTTCAAATTGGCGGCGAACCCCTACTTTCAACCGATTTAGAAGTTTCAAGTCTTCTCCTTTTTCCTTTTTTTACAGGAGAAAACTCCATATTACAGCAGATAATATTGGTGTTAATATCACCCAATTAAACATTCTGTTCAAAATTAACCACAACTGATACTTTTATCACACAAATAATGTGCTATTACGTGCCCACTTGTGCCTGAAAGACTTTAATTGCAAAAAACTGGCTTCATCTTTGGTATCACTTAATATCTACCCCAAATAGCACTAGTTGATAAGGTTTTGAAAGGGGATTAGCTTATTTTCGTTCTTTTTCCATAACCCGTTTGGGTATGAGTAGTTTGACGTTGTTTTATGCATTTTCTTCTTTTATCTTAAAGCACCAGATCATCTCTTAGTACGAACTAGAAATCATGTAGTGTCTGTTTCTTTGTTTGCTGTGTTGAACCATTGAAGAGGATGATTCAGGTGTGTCAATAGGTAATAGTGAGATAGGTTTGTCAAAATGAGGTTTATTATTCTAGTCAGCTTCTCTAATTTATTAAGAACTGTATAGAAAGTAAAGTTTGTTTTGCTTTCTTCTGATCGCACTAAACAAACATACAAGGGCAGATAAATGCTTTACTAGAGGGAAGTATAGTAATCCGTCCCCTTAGAAAAAGAGCGCAAGCTTTAAATAGCACAAATGGAGAAAAAGTACAAATATGAATTTTTAGTCCAAGACTTGAGATAATAAGCATGAATAACAAATATATGGCCAAAGAAGTTGAAAAAAATATATGGTAGAGTCAAAAGTGATATATCAATTGTTTAGTGTGACCGAGGCGCTTATTGGTAAGGAAAATATGTCTTAGAGCCTTAATGATGCTGAAGTGCACATCAAGCAATGCAACACGCTTAGCATATTTTGCGTCTCGCTTCAGTGCTTATGTGCGTCTTTGACAACACTGGGTCAGTTAAAAACAAATTATCTCGATGTATTTTTATAAACATGCAACTTTTCCTTATAAAAACATTTCATCAATGTTAACATTATAGTTGACATGGCAACTATTCGTTCTGATCAGATTTATAATTTGTTTTACTTAAGCTCAGATCAAGTTGACAGTGTTCTTTTGGGTAGAAAGGAACAGGAAAACTGAATTGGGAACTCTTAAAACTAATGGAACGATAGTAAGTTTTTTTTTTGATGAAATGAGGCATTTCATTGCTGGTATCAATAAAATTCAGAGTTACGAAAACAAGTAGATGATAGCTTCAGTAAAAAAAAACTAATAAATGGTAAAAGTTCTGTTTCATGCTAACAGGGTACATAGCTAGAATTGTCATATTTCAAAATGGTTGCGTCTTGATCTCTTTGTCTATGTAACTATGTAAATATAGTTATGTCCTTTAACTTCTGTTGATACTCGTCTAGATTAAAGTAGCCATTGAGATCTTTAAGGTACTTGAGAGTTATAAATTACAATTGGTTTGAGATAATGAACATATGAGAACCATGATAGAGTCGTTGTGATGGGATTGTGGTGTTATTTAATTTGTATAACTTGTCTGAAAAATTGCCATGCTATTTTCATTCTATAGCTAGTTTCTAGGAGATGATGAAAAAAGAGCAAACCAGCTGAAAGTATGTCTAGAATCCATGCTTGGTGGTGTTCTTAGGTTGAGGCAAGCAATGCAATAAACTAGGAACATTCACAGAATGTTGTGAGTGGTTTTAGCCCTCCAAGCCGTAAAATCTATTGTCCTTTTAGTTGTGTAAATGAGCTAAGCCAATCCTAACATTAGTCGGGTTCAGCTCACTTGGTGCATTAAGAGATGAGCTGAAGGTTGAGTCTAATCAAGCCCGAGCGCAAGACAGTCGGTTCAGTTTCTTTTTTTGGTTGATAACGGTGGTGTGAATCGTGTGATGTCGGGGCCAGCTTTCATGCACCTCGGTGTTGGGTCTGAGCTAAATATCTGCTCTGCAGGATGGTTAGCTTTTATCACAAACATTAATAACTATTACCCAAACTAGAAATGTTAAAAATAATGAAGACAACCTTAACAAAAATAATTATACGACTCTCATGTTTGGAAATGAGTTCTGCAAAGTGTTAACATATCCTTAAATCTTTAAACAATTGAAAAAATAGAAATAAATGCAATGCATCTGATGCTGAAATAAGACTCTGGATTTGTTGCATTTGTCTAATATCTGAGTCCATGAGAGATATAAAGGATGCTGGAGATAAGTAGGAGGGTTGTTTTATTACTAGCAATATATCTGTGCTAATTGTGCATCTGATTTTGATCTTAGGCCAATTAATGAGATAACTTTGGGATATTCCATAAAGTGAAGCTTATCTGCATTTTATAGCGACACCTTTTCATACATTTAATCCCCTGTTTAGTATTTGAATGGTCAAAGGATGACTAATTGTGCATAGAAATTATCTTTGCAGTTCCGGTAACAAAGAAAAAAAAGTGTTAGCTGCTGTAGCACCCCACAAAATGGAAAGAAGTAGTTTTTTTTTAATCTTTTCAAAACTGCTGTTTCTTTTATCGTCTTGGAGATATCAATTTGTTAACTGTGTGTTGATATTATCATATACAAATTCTAACTATTTGAACTCCCTCTCTACCAGGCTTTGTTCTTGTGGCGAAGACTCCACTTGCTGTCAATAATGGTAGCTGATGATGTTTTGCAGTGTCAGCCAAGTGTATTGCATATGTACTCCGTTTTTTAAAAATGTTGAGATATATATTCTTGGAGCAATTTCCTTTGGTTTTAGAGTGATAAGTTTCACCAGTCGAATAATTTTTTTTTTCATTTAGCTTATGCGGATTGTTCCATGTCTTGTGCTTGAAAGAGTGAAAGTTAGTCGAAC</genome_strand>
        <mrna_strand>GAGGCGTCAGGGAAATCGATGATCCAAACCCTAAAACGGTTCATGAAGAAGCCATGGGAGTTCACCGGACCTCAAACAAGCCCCGAGTATTTAGACTCTATACCCAAGGCAGCGGAGTACAGAATCTTCTGTCCTGCCACTACCCAATCTCAGGCCATCATCCCCACATCCGATCCTGAAACCGTCTTCGATATCAAGTATTATTCTCGTGACCAGAGGCGTAACCGTCCTCCAATCAAGCGCACTTTCCTCACCAAAGCTGATGTTGAGAAGATGAGGATGGAGTACAAATTTGATGTCAACGATTTTCCTAAGCCTTATTTGACTGCTAAGGTTGAAGAGGATGAAAATGCTATTGGTGGTGGCTACCAGAAATGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGTTCTTGTGGCGAAGACTCCACTTGCTGTCAATAATGGTAGCTGATGATGTTTTGCAGTGTCAGCCAAGTGTATTGCATATGTACTCCGTTTTTTAAAAATGTTGAGATATATATTCTTGGAGCAATTTCCTTTGGTTTTAGAGTGATAAGTTTCACCAGTCGAATAATTTTTTTTTTCATTTAGCTTATGCGGATTGTTCCATGTCTTGTGCTTGAAAGAGTGAAAGTTAGTCGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E728993" ref_strand="+" ref_description="SGN-E728993 [LA19CE07]">
      <seq>cttcgtcagggaaatcgatgatccaaaccctaaaacggttcatgaagaagccatgggagttgaacggacctgaaacaagccccgagtatttagactctatacctaaggcagcggagtacagaatcttctgtcctgccactacccaatctcaggccatcatccccacatccgatcctgaaaccgtcttcgatatcaagtattattctcgtgaccagaggcgtagccgtcctccaatcaagcgcactttcctcaccaaagctgatgttgagaagatgaggatggagtacaaatttgatgtcaacgattttcctaagccttatttgactgctaaggttgaagaggatgaaaatgctattggtggtggctaccagaaatgaaggctttgttcttgtggcgaagactccacttgctgtcaataatggtagctgatgatgttttgcagtgtcagccaagtgtattgcatatgtactccgttttttaaaaatgttgagatatatattcttggagcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="79754" stop="84657"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80054" g_stop="80432" g_length="379"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="379" r_length="379" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80433" i_stop="84226" i_length="3794">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84227" g_stop="84356" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="380" r_stop="509" r_length="130" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E728993" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E728993" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80054" e_stop="80432"/>
          <exon e_start="84227" e_stop="84356"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCGTCAGGGAAATCGATGATCCAAACCCTAAAACGGTTCATGAAGAAGCCATGGGAGTTCACCGGACCTCAAACAAGCCCCGAGTATTTAGACTCTATACCCAAGGCAGCGGAGTACAGAATCTTCTGTCCTGCCACTACCCAATCTCAGGCCATCATCCCCACATCCGATCCTGAAACCGTCTTCGATATCAAGTATTATTCTCGTGACCAGAGGCGTAACCGTCCTCCAATCAAGCGCACTTTCCTCACCAAAGCTGATGTTGAGAAGATGAGGATGGAGTACAAATTTGATGTCAACGATTTTCCTAAGCCTTATTTGACTGCTAAGGTTGAAGAGGATGAAAATGCTATTGGTGGTGGCTACCAGAAATGAAGGTAATTTTTTTTATAATAATAATTGGGGTAGATGAACGAACTGAACTACTAATATTCCTCGAAATGAAGGTATTGTGATTCAATTTTAGGGGTTTTATTATAACCGTTTATCTATCATTGTTGGAAATTGAGTTTGTTATTTGAATAATCAAGCAATCATTATTTCAACCGCATATGCCTTTGTTATCATTGCTTTTGTACTATGTTTTATTTGGACCAATTTCATCCGATACTGATAAGTAATTTGCTTTCAGGGCACATCCAGAGTTCTCTAAGTCCTCATTGTTTCGTATAGATAGTATTTGAGCTGGATAGCTAGTGGTCCGATTTAGGAGGAATGTGGAACTTCTCTTCAATTACAATTGTTGGGGAGTTATCACATTTTTCTTGAATTGGTGTTTTCTTTGGTTCCTTTTCAGTAAAGACTTGTAGACATGTAATCTGAAGATGTTGTGTCCCCACTTGTTTTTAAGTGCTGTGGGTTTGGAGGAAAATGTTTTTTTTTTCATGTAAAAAATATTTCTATATCTTTTTGTGGTGTTTGGTTGATTATGAAAGAAGGTGACATATGGAAGTCATACAAGGTGTAGGATGGTGTATAGCTTGTGTTTGTGTGATATCTTCGAGTACTAAATGTTGAAGACGCTTAAGGGTTAATTGAGACAAGTGATATCATGTAAGAGTTGAGTTAGCTTTGGGAAGGAAATGGAATGTCATTTGATGTTGTAAGCACTTGACGAGATTTTATCTGTTCCCTCCCTCTCCTAGTGGGAAAGTAAAACGGGACGTAGTGGAAACTTTGGTAGCAGTCTGTAATGAGAACGTCAAATAGGTTTCAGAAATATGCTTTTTGGGGCTTACTTGAAATTAGATTAAAGGGAGAACTGTTTAGCTAGGTTTGTGCAATTTGAGAATTATTTTTTTCAGGAATATCTGTTGGGTGTTGGGAGTCTATCACATGAAACACAAGAGGTAAATCTAATCAACACATTGAGCTTCTGTTGCCTCCTTTAGCTGCTTCCTTCCTTGCTGCCCTTCTCAAAACTTAAGTTTTGATGGATGCATCCTCTCTTCTTTCCCTACTGTCATGAGCACCTTTGACCCCTGTTCTAGTTTTTCTTCCGTTTCCTTTTCTAATGTCCTCCCCTCTACGATTGTCTATGTTTCAAATTGGCGGCGAACCCCTACTTTCAACCGATTTAGAAGTTTCAAGTCTTCTCCTTTTTCCTTTTTTTACAGGAGAAAACTCCATATTACAGCAGATAATATTGGTGTTAATATCACCCAATTAAACATTCTGTTCAAAATTAACCACAACTGATACTTTTATCACACAAATAATGTGCTATTACGTGCCCACTTGTGCCTGAAAGACTTTAATTGCAAAAAACTGGCTTCATCTTTGGTATCACTTAATATCTACCCCAAATAGCACTAGTTGATAAGGTTTTGAAAGGGGATTAGCTTATTTTCGTTCTTTTTCCATAACCCGTTTGGGTATGAGTAGTTTGACGTTGTTTTATGCATTTTCTTCTTTTATCTTAAAGCACCAGATCATCTCTTAGTACGAACTAGAAATCATGTAGTGTCTGTTTCTTTGTTTGCTGTGTTGAACCATTGAAGAGGATGATTCAGGTGTGTCAATAGGTAATAGTGAGATAGGTTTGTCAAAATGAGGTTTATTATTCTAGTCAGCTTCTCTAATTTATTAAGAACTGTATAGAAAGTAAAGTTTGTTTTGCTTTCTTCTGATCGCACTAAACAAACATACAAGGGCAGATAAATGCTTTACTAGAGGGAAGTATAGTAATCCGTCCCCTTAGAAAAAGAGCGCAAGCTTTAAATAGCACAAATGGAGAAAAAGTACAAATATGAATTTTTAGTCCAAGACTTGAGATAATAAGCATGAATAACAAATATATGGCCAAAGAAGTTGAAAAAAATATATGGTAGAGTCAAAAGTGATATATCAATTGTTTAGTGTGACCGAGGCGCTTATTGGTAAGGAAAATATGTCTTAGAGCCTTAATGATGCTGAAGTGCACATCAAGCAATGCAACACGCTTAGCATATTTTGCGTCTCGCTTCAGTGCTTATGTGCGTCTTTGACAACACTGGGTCAGTTAAAAACAAATTATCTCGATGTATTTTTATAAACATGCAACTTTTCCTTATAAAAACATTTCATCAATGTTAACATTATAGTTGACATGGCAACTATTCGTTCTGATCAGATTTATAATTTGTTTTACTTAAGCTCAGATCAAGTTGACAGTGTTCTTTTGGGTAGAAAGGAACAGGAAAACTGAATTGGGAACTCTTAAAACTAATGGAACGATAGTAAGTTTTTTTTTTGATGAAATGAGGCATTTCATTGCTGGTATCAATAAAATTCAGAGTTACGAAAACAAGTAGATGATAGCTTCAGTAAAAAAAAACTAATAAATGGTAAAAGTTCTGTTTCATGCTAACAGGGTACATAGCTAGAATTGTCATATTTCAAAATGGTTGCGTCTTGATCTCTTTGTCTATGTAACTATGTAAATATAGTTATGTCCTTTAACTTCTGTTGATACTCGTCTAGATTAAAGTAGCCATTGAGATCTTTAAGGTACTTGAGAGTTATAAATTACAATTGGTTTGAGATAATGAACATATGAGAACCATGATAGAGTCGTTGTGATGGGATTGTGGTGTTATTTAATTTGTATAACTTGTCTGAAAAATTGCCATGCTATTTTCATTCTATAGCTAGTTTCTAGGAGATGATGAAAAAAGAGCAAACCAGCTGAAAGTATGTCTAGAATCCATGCTTGGTGGTGTTCTTAGGTTGAGGCAAGCAATGCAATAAACTAGGAACATTCACAGAATGTTGTGAGTGGTTTTAGCCCTCCAAGCCGTAAAATCTATTGTCCTTTTAGTTGTGTAAATGAGCTAAGCCAATCCTAACATTAGTCGGGTTCAGCTCACTTGGTGCATTAAGAGATGAGCTGAAGGTTGAGTCTAATCAAGCCCGAGCGCAAGACAGTCGGTTCAGTTTCTTTTTTTGGTTGATAACGGTGGTGTGAATCGTGTGATGTCGGGGCCAGCTTTCATGCACCTCGGTGTTGGGTCTGAGCTAAATATCTGCTCTGCAGGATGGTTAGCTTTTATCACAAACATTAATAACTATTACCCAAACTAGAAATGTTAAAAATAATGAAGACAACCTTAACAAAAATAATTATACGACTCTCATGTTTGGAAATGAGTTCTGCAAAGTGTTAACATATCCTTAAATCTTTAAACAATTGAAAAAATAGAAATAAATGCAATGCATCTGATGCTGAAATAAGACTCTGGATTTGTTGCATTTGTCTAATATCTGAGTCCATGAGAGATATAAAGGATGCTGGAGATAAGTAGGAGGGTTGTTTTATTACTAGCAATATATCTGTGCTAATTGTGCATCTGATTTTGATCTTAGGCCAATTAATGAGATAACTTTGGGATATTCCATAAAGTGAAGCTTATCTGCATTTTATAGCGACACCTTTTCATACATTTAATCCCCTGTTTAGTATTTGAATGGTCAAAGGATGACTAATTGTGCATAGAAATTATCTTTGCAGTTCCGGTAACAAAGAAAAAAAAGTGTTAGCTGCTGTAGCACCCCACAAAATGGAAAGAAGTAGTTTTTTTTTAATCTTTTCAAAACTGCTGTTTCTTTTATCGTCTTGGAGATATCAATTTGTTAACTGTGTGTTGATATTATCATATACAAATTCTAACTATTTGAACTCCCTCTCTACCAGGCTTTGTTCTTGTGGCGAAGACTCCACTTGCTGTCAATAATGGTAGCTGATGATGTTTTGCAGTGTCAGCCAAGTGTATTGCATATGTACTCCGTTTTTTAAAAATGTTGAGATATATATTCTTGGAGCA</genome_strand>
        <mrna_strand>CTTCGTCAGGGAAATCGATGATCCAAACCCTAAAACGGTTCATGAAGAAGCCATGGGAGTTGAACGGACCTGAAACAAGCCCCGAGTATTTAGACTCTATACCTAAGGCAGCGGAGTACAGAATCTTCTGTCCTGCCACTACCCAATCTCAGGCCATCATCCCCACATCCGATCCTGAAACCGTCTTCGATATCAAGTATTATTCTCGTGACCAGAGGCGTAGCCGTCCTCCAATCAAGCGCACTTTCCTCACCAAAGCTGATGTTGAGAAGATGAGGATGGAGTACAAATTTGATGTCAACGATTTTCCTAAGCCTTATTTGACTGCTAAGGTTGAAGAGGATGAAAATGCTATTGGTGGTGGCTACCAGAAATGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGTTCTTGTGGCGAAGACTCCACTTGCTGTCAATAATGGTAGCTGATGATGTTTTGCAGTGTCAGCCAAGTGTATTGCATATGTACTCCGTTTTTTAAAAATGTTGAGATATATATTCTTGGAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E733347" ref_strand="+" ref_description="SGN-E733347 [LB04CE07]">
      <seq>cttcgtcagggaaatcgatgatccaaaccctaaaacggttcatgaagaagccatgggagttcaccggacctcaaacaagccccgagtatttagactctatacctaaggcagcggagtacagaatcttctgtcctgccactacccaatctcaggccatcatccccacatccgatcctgaaaccgtcttcgatatcaagtattattctcgtgaccagaggcgtaaccgtcctccaatcaagcgcactttcctcaccaaagctgatgttgagaagatgaggatggagtacaaatttgatgtcaacgattttcctaagccttatttgactgctaaggttgaagaggatgaaaatgctattggtggtggctaccagaaatgaaggctttgttcttgtggcgaagactccacttgctgtcaataatggtagctgatgatgttttgcagtgtcagccaagtgtattgcatatgtactccgttttttaaaaatgttgagatatatattcttggagcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="79754" stop="84657"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80054" g_stop="80432" g_length="379"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="379" r_length="379" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80433" i_stop="84226" i_length="3794">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84227" g_stop="84356" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="380" r_stop="509" r_length="130" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E733347" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E733347" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80054" e_stop="80432"/>
          <exon e_start="84227" e_stop="84356"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCGTCAGGGAAATCGATGATCCAAACCCTAAAACGGTTCATGAAGAAGCCATGGGAGTTCACCGGACCTCAAACAAGCCCCGAGTATTTAGACTCTATACCCAAGGCAGCGGAGTACAGAATCTTCTGTCCTGCCACTACCCAATCTCAGGCCATCATCCCCACATCCGATCCTGAAACCGTCTTCGATATCAAGTATTATTCTCGTGACCAGAGGCGTAACCGTCCTCCAATCAAGCGCACTTTCCTCACCAAAGCTGATGTTGAGAAGATGAGGATGGAGTACAAATTTGATGTCAACGATTTTCCTAAGCCTTATTTGACTGCTAAGGTTGAAGAGGATGAAAATGCTATTGGTGGTGGCTACCAGAAATGAAGGTAATTTTTTTTATAATAATAATTGGGGTAGATGAACGAACTGAACTACTAATATTCCTCGAAATGAAGGTATTGTGATTCAATTTTAGGGGTTTTATTATAACCGTTTATCTATCATTGTTGGAAATTGAGTTTGTTATTTGAATAATCAAGCAATCATTATTTCAACCGCATATGCCTTTGTTATCATTGCTTTTGTACTATGTTTTATTTGGACCAATTTCATCCGATACTGATAAGTAATTTGCTTTCAGGGCACATCCAGAGTTCTCTAAGTCCTCATTGTTTCGTATAGATAGTATTTGAGCTGGATAGCTAGTGGTCCGATTTAGGAGGAATGTGGAACTTCTCTTCAATTACAATTGTTGGGGAGTTATCACATTTTTCTTGAATTGGTGTTTTCTTTGGTTCCTTTTCAGTAAAGACTTGTAGACATGTAATCTGAAGATGTTGTGTCCCCACTTGTTTTTAAGTGCTGTGGGTTTGGAGGAAAATGTTTTTTTTTTCATGTAAAAAATATTTCTATATCTTTTTGTGGTGTTTGGTTGATTATGAAAGAAGGTGACATATGGAAGTCATACAAGGTGTAGGATGGTGTATAGCTTGTGTTTGTGTGATATCTTCGAGTACTAAATGTTGAAGACGCTTAAGGGTTAATTGAGACAAGTGATATCATGTAAGAGTTGAGTTAGCTTTGGGAAGGAAATGGAATGTCATTTGATGTTGTAAGCACTTGACGAGATTTTATCTGTTCCCTCCCTCTCCTAGTGGGAAAGTAAAACGGGACGTAGTGGAAACTTTGGTAGCAGTCTGTAATGAGAACGTCAAATAGGTTTCAGAAATATGCTTTTTGGGGCTTACTTGAAATTAGATTAAAGGGAGAACTGTTTAGCTAGGTTTGTGCAATTTGAGAATTATTTTTTTCAGGAATATCTGTTGGGTGTTGGGAGTCTATCACATGAAACACAAGAGGTAAATCTAATCAACACATTGAGCTTCTGTTGCCTCCTTTAGCTGCTTCCTTCCTTGCTGCCCTTCTCAAAACTTAAGTTTTGATGGATGCATCCTCTCTTCTTTCCCTACTGTCATGAGCACCTTTGACCCCTGTTCTAGTTTTTCTTCCGTTTCCTTTTCTAATGTCCTCCCCTCTACGATTGTCTATGTTTCAAATTGGCGGCGAACCCCTACTTTCAACCGATTTAGAAGTTTCAAGTCTTCTCCTTTTTCCTTTTTTTACAGGAGAAAACTCCATATTACAGCAGATAATATTGGTGTTAATATCACCCAATTAAACATTCTGTTCAAAATTAACCACAACTGATACTTTTATCACACAAATAATGTGCTATTACGTGCCCACTTGTGCCTGAAAGACTTTAATTGCAAAAAACTGGCTTCATCTTTGGTATCACTTAATATCTACCCCAAATAGCACTAGTTGATAAGGTTTTGAAAGGGGATTAGCTTATTTTCGTTCTTTTTCCATAACCCGTTTGGGTATGAGTAGTTTGACGTTGTTTTATGCATTTTCTTCTTTTATCTTAAAGCACCAGATCATCTCTTAGTACGAACTAGAAATCATGTAGTGTCTGTTTCTTTGTTTGCTGTGTTGAACCATTGAAGAGGATGATTCAGGTGTGTCAATAGGTAATAGTGAGATAGGTTTGTCAAAATGAGGTTTATTATTCTAGTCAGCTTCTCTAATTTATTAAGAACTGTATAGAAAGTAAAGTTTGTTTTGCTTTCTTCTGATCGCACTAAACAAACATACAAGGGCAGATAAATGCTTTACTAGAGGGAAGTATAGTAATCCGTCCCCTTAGAAAAAGAGCGCAAGCTTTAAATAGCACAAATGGAGAAAAAGTACAAATATGAATTTTTAGTCCAAGACTTGAGATAATAAGCATGAATAACAAATATATGGCCAAAGAAGTTGAAAAAAATATATGGTAGAGTCAAAAGTGATATATCAATTGTTTAGTGTGACCGAGGCGCTTATTGGTAAGGAAAATATGTCTTAGAGCCTTAATGATGCTGAAGTGCACATCAAGCAATGCAACACGCTTAGCATATTTTGCGTCTCGCTTCAGTGCTTATGTGCGTCTTTGACAACACTGGGTCAGTTAAAAACAAATTATCTCGATGTATTTTTATAAACATGCAACTTTTCCTTATAAAAACATTTCATCAATGTTAACATTATAGTTGACATGGCAACTATTCGTTCTGATCAGATTTATAATTTGTTTTACTTAAGCTCAGATCAAGTTGACAGTGTTCTTTTGGGTAGAAAGGAACAGGAAAACTGAATTGGGAACTCTTAAAACTAATGGAACGATAGTAAGTTTTTTTTTTGATGAAATGAGGCATTTCATTGCTGGTATCAATAAAATTCAGAGTTACGAAAACAAGTAGATGATAGCTTCAGTAAAAAAAAACTAATAAATGGTAAAAGTTCTGTTTCATGCTAACAGGGTACATAGCTAGAATTGTCATATTTCAAAATGGTTGCGTCTTGATCTCTTTGTCTATGTAACTATGTAAATATAGTTATGTCCTTTAACTTCTGTTGATACTCGTCTAGATTAAAGTAGCCATTGAGATCTTTAAGGTACTTGAGAGTTATAAATTACAATTGGTTTGAGATAATGAACATATGAGAACCATGATAGAGTCGTTGTGATGGGATTGTGGTGTTATTTAATTTGTATAACTTGTCTGAAAAATTGCCATGCTATTTTCATTCTATAGCTAGTTTCTAGGAGATGATGAAAAAAGAGCAAACCAGCTGAAAGTATGTCTAGAATCCATGCTTGGTGGTGTTCTTAGGTTGAGGCAAGCAATGCAATAAACTAGGAACATTCACAGAATGTTGTGAGTGGTTTTAGCCCTCCAAGCCGTAAAATCTATTGTCCTTTTAGTTGTGTAAATGAGCTAAGCCAATCCTAACATTAGTCGGGTTCAGCTCACTTGGTGCATTAAGAGATGAGCTGAAGGTTGAGTCTAATCAAGCCCGAGCGCAAGACAGTCGGTTCAGTTTCTTTTTTTGGTTGATAACGGTGGTGTGAATCGTGTGATGTCGGGGCCAGCTTTCATGCACCTCGGTGTTGGGTCTGAGCTAAATATCTGCTCTGCAGGATGGTTAGCTTTTATCACAAACATTAATAACTATTACCCAAACTAGAAATGTTAAAAATAATGAAGACAACCTTAACAAAAATAATTATACGACTCTCATGTTTGGAAATGAGTTCTGCAAAGTGTTAACATATCCTTAAATCTTTAAACAATTGAAAAAATAGAAATAAATGCAATGCATCTGATGCTGAAATAAGACTCTGGATTTGTTGCATTTGTCTAATATCTGAGTCCATGAGAGATATAAAGGATGCTGGAGATAAGTAGGAGGGTTGTTTTATTACTAGCAATATATCTGTGCTAATTGTGCATCTGATTTTGATCTTAGGCCAATTAATGAGATAACTTTGGGATATTCCATAAAGTGAAGCTTATCTGCATTTTATAGCGACACCTTTTCATACATTTAATCCCCTGTTTAGTATTTGAATGGTCAAAGGATGACTAATTGTGCATAGAAATTATCTTTGCAGTTCCGGTAACAAAGAAAAAAAAGTGTTAGCTGCTGTAGCACCCCACAAAATGGAAAGAAGTAGTTTTTTTTTAATCTTTTCAAAACTGCTGTTTCTTTTATCGTCTTGGAGATATCAATTTGTTAACTGTGTGTTGATATTATCATATACAAATTCTAACTATTTGAACTCCCTCTCTACCAGGCTTTGTTCTTGTGGCGAAGACTCCACTTGCTGTCAATAATGGTAGCTGATGATGTTTTGCAGTGTCAGCCAAGTGTATTGCATATGTACTCCGTTTTTTAAAAATGTTGAGATATATATTCTTGGAGCA</genome_strand>
        <mrna_strand>CTTCGTCAGGGAAATCGATGATCCAAACCCTAAAACGGTTCATGAAGAAGCCATGGGAGTTCACCGGACCTCAAACAAGCCCCGAGTATTTAGACTCTATACCTAAGGCAGCGGAGTACAGAATCTTCTGTCCTGCCACTACCCAATCTCAGGCCATCATCCCCACATCCGATCCTGAAACCGTCTTCGATATCAAGTATTATTCTCGTGACCAGAGGCGTAACCGTCCTCCAATCAAGCGCACTTTCCTCACCAAAGCTGATGTTGAGAAGATGAGGATGGAGTACAAATTTGATGTCAACGATTTTCCTAAGCCTTATTTGACTGCTAAGGTTGAAGAGGATGAAAATGCTATTGGTGGTGGCTACCAGAAATGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGTTCTTGTGGCGAAGACTCCACTTGCTGTCAATAATGGTAGCTGATGATGTTTTGCAGTGTCAGCCAAGTGTATTGCATATGTACTCCGTTTTTTAAAAATGTTGAGATATATATTCTTGGAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E544229" ref_strand="+" ref_description="SGN-E544229 [TUS-66-H7]">
      <seq>ctagagtacgccatcggaatgatctccgatcaaaaccctaaacccccgtatcagttatgccgccgatctagctgcttcttccatacgtgaaaaagagtaactcagagaacttgatgcagtcaggttttcttaaatttctcgcatgtattcttttatagaaaaatcaagaactcttaagttacattcatataaaaatagaaactgtagttttcttgaatatattggcattgcaaatatcaaggaatttcaagaaattaggttgttattctcgcagtgtatgttaagtatgttaaggatgttcaagaattgaatggaatggntgtggagttgttcttgaactcaaaaacaaaaattaagtagtttaattataggagtttgtgatttgtagtaatttgaatgaagacactcaattggacagactttcagaaaggtttgtgtaatgcaagagaatagagaatatatggttcatcttttctgattttgttaaaacaaaaattaagtagtttaattatacgagtttgtgatttgtagtaatttgaatgaagacactcaattggacagactttcatgaaggtttgtgtaatgtaagagaatagagaatatatggttcatcttttctgattttgttaaaacaaaaattaagtagtttaattatacgagtgtgtgatttgtagtaaattgaatgaagacactcaattggacagact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="85294" stop="86599"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85594" g_stop="86299" g_length="706"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="707" r_length="707" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E544229" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E544229" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85594" e_stop="86299"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAGAGTACGCCATCGGAATGATCTCCGATCAAAACCCTAAACCCCCGTATCAGTTATGCCGCCGATCTAGCTGCTTCTTCCATACGTGAAAAAGAGTAACTCAGAGAACTTGATGCAGTCAGGTTTTCTTAAATTTCTCGCATGTATTCTTTTATAGAAAAATCAAGAACTCTTAAGTTACATTCATATAAAAATAGAAACTGTAGTTTTCTTGAATATATTGGCATTGCAAATATCAAGGAATTTCAAGAAATTAGGTTGTTATTCTCGCAGTGTATGTTAAGTATGTTAAGGATGTTCAAGAATTGAATGGAAT-GTTGTGGAGTTGTTCTTGAACTCAAAAACAAAAATTAAGTAGTTTAATTATAGGAGTTTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACTTTCAGAAAGGTTTGTGTAATGCAAGAGAATAGAGAATATATGGTTCATCTTTTCTGATTTTGTTAAAACAAAAATTAAGTAGTTTAATTATACGAGTTTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACTTTCATGAAGGTTTGTGTAATGTAAGAGAATAGAGAATATATGGTTCATCTTTTCTGATTTTGTTAAAACAAAAATTAAGTAGTTTAATTATACGAGTGTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACT</genome_strand>
        <mrna_strand>CTAGAGTACGCCATCGGAATGATCTCCGATCAAAACCCTAAACCCCCGTATCAGTTATGCCGCCGATCTAGCTGCTTCTTCCATACGTGAAAAAGAGTAACTCAGAGAACTTGATGCAGTCAGGTTTTCTTAAATTTCTCGCATGTATTCTTTTATAGAAAAATCAAGAACTCTTAAGTTACATTCATATAAAAATAGAAACTGTAGTTTTCTTGAATATATTGGCATTGCAAATATCAAGGAATTTCAAGAAATTAGGTTGTTATTCTCGCAGTGTATGTTAAGTATGTTAAGGATGTTCAAGAATTGAATGGAATGGNTGTGGAGTTGTTCTTGAACTCAAAAACAAAAATTAAGTAGTTTAATTATAGGAGTTTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACTTTCAGAAAGGTTTGTGTAATGCAAGAGAATAGAGAATATATGGTTCATCTTTTCTGATTTTGTTAAAACAAAAATTAAGTAGTTTAATTATACGAGTTTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACTTTCATGAAGGTTTGTGTAATGTAAGAGAATAGAGAATATATGGTTCATCTTTTCTGATTTTGTTAAAACAAAAATTAAGTAGTTTAATTATACGAGTGTGTGATTTGTAGTAAATTGAATGAAGACACTCAATTGGACAGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E307235" ref_strand="+" ref_description="SGN-E307235 [cLEY-12-A11]">
      <seq>atcggattgatctccgatcaaaaccctaggcccccgtatcagttatgccgccgatctagctgcttcttccatacgtgaaaaagagtaactcagagaacttgatgcagtcaggttttcttaaatttctcgcatgtattcttttatagaaaaatcaagaactcttaagttacattcatataaaaatagaaactgtagttttcttgaatatattggcattgcaaatatcaaggaatttcaagaaattaggttgttattctcgcagtgtatgttaagtatgttaaggatgttcaagaattgaatggaatgttgtggagttgttcttgaactcaaaaacaaaaattaagtagtttaattataggagtttgtgatttgtagtaatttgaatgaagacactcaattggacagactttcagaaaggtttgtgtaatgcaagagaatagagaatatatggttcatcttttctgattttgttaaaacaaaaattaagtagtttaattatacgagtttgtgatttgtagtaatttgaatgaagacactcaattggacagactttcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="85306" stop="86462"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85606" g_stop="86162" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="557" r_length="557" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E307235" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E307235" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85606" e_stop="86162"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGGAATGATCTCCGATCAAAACCCTAAACCCCCGTATCAGTTATGCCGCCGATCTAGCTGCTTCTTCCATACGTGAAAAAGAGTAACTCAGAGAACTTGATGCAGTCAGGTTTTCTTAAATTTCTCGCATGTATTCTTTTATAGAAAAATCAAGAACTCTTAAGTTACATTCATATAAAAATAGAAACTGTAGTTTTCTTGAATATATTGGCATTGCAAATATCAAGGAATTTCAAGAAATTAGGTTGTTATTCTCGCAGTGTATGTTAAGTATGTTAAGGATGTTCAAGAATTGAATGGAATGTTGTGGAGTTGTTCTTGAACTCAAAAACAAAAATTAAGTAGTTTAATTATAGGAGTTTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACTTTCAGAAAGGTTTGTGTAATGCAAGAGAATAGAGAATATATGGTTCATCTTTTCTGATTTTGTTAAAACAAAAATTAAGTAGTTTAATTATACGAGTTTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACTTTCATG</genome_strand>
        <mrna_strand>ATCGGATTGATCTCCGATCAAAACCCTAGGCCCCCGTATCAGTTATGCCGCCGATCTAGCTGCTTCTTCCATACGTGAAAAAGAGTAACTCAGAGAACTTGATGCAGTCAGGTTTTCTTAAATTTCTCGCATGTATTCTTTTATAGAAAAATCAAGAACTCTTAAGTTACATTCATATAAAAATAGAAACTGTAGTTTTCTTGAATATATTGGCATTGCAAATATCAAGGAATTTCAAGAAATTAGGTTGTTATTCTCGCAGTGTATGTTAAGTATGTTAAGGATGTTCAAGAATTGAATGGAATGTTGTGGAGTTGTTCTTGAACTCAAAAACAAAAATTAAGTAGTTTAATTATAGGAGTTTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACTTTCAGAAAGGTTTGTGTAATGCAAGAGAATAGAGAATATATGGTTCATCTTTTCTGATTTTGTTAAAACAAAAATTAAGTAGTTTAATTATACGAGTTTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACTTTCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E538629" ref_strand="+" ref_description="SGN-E538629 [TUS-57-P13]">
      <seq>agttcacagggttcaaaatcgcatatgggtgtaccatgcgtcttggatcaagaagaacgtattttagagtcaaagattctaaatctgtaaaactatcaatgtcgcaaccggagctttgttgatgaaaggcaccgtcatagatatgaggtgaatcttgatatggtgcagaaatttgaagatgcttgtctttctttccctggcaaagatgaaagtgatcggtacatggaggtaatgttgcaataggaattgggacctgctatgttaaggtggatgacaatgggtggatggggactcacataaatggattgatgcttgaaatcgaggtaaaacagataagtcttacaaggaagaagaagtcatacaactcttccattttaccatggcaagaagttctttgccacgagtgagtcttcaagaaaggcagaaggaaataataatattaagacagttcatgatgtgttactcatgccagaaactagaactgtaaggagactgcatcattctacagaagctatctggctggagcttccacgacagtcatgagtcatcccatcaatgtgattaatcttcaacccatgacagtgtattttctgatggaaggccaagtgtgaaaatggaacctgtcaacatctgaaataacaattacaagctcaaggggagtgctcaagtacgcacaatggggagtcaaaagaagggtggatggaactcgggtaaatggattgatacggggaatcanggtaaaacagatgagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="88325" stop="93831"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88625" g_stop="88722" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88723" i_stop="88832" i_length="110">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88833" g_stop="88881" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="147" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88882" i_stop="89027" i_length="146">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89028" g_stop="89108" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="228" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89109" i_stop="89660" i_length="552">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.898" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="89661" g_stop="89711" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="279" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="89712" i_stop="90826" i_length="1115">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.446" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="90827" g_stop="91019" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="472" r_length="193" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="91020" i_stop="91107" i_length="88">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="91108" g_stop="91235" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="600" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="91236" i_stop="91315" i_length="80">
            <donor d_prob="0.885" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="91316" g_stop="91409" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="601" r_stop="694" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="91410" i_stop="93472" i_length="2063">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.431" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="93473" g_stop="93531" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="695" r_stop="753" r_length="59" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E538629" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>753</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E538629" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88625" e_stop="88722"/>
          <exon e_start="88833" e_stop="88881"/>
          <exon e_start="89028" e_stop="89108"/>
          <exon e_start="89661" e_stop="89711"/>
          <exon e_start="90827" e_stop="91019"/>
          <exon e_start="91108" e_stop="91235"/>
          <exon e_start="91316" e_stop="91409"/>
          <exon e_start="93473" e_stop="93531"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTCACAGGGTTCAAAATCGCATATGGGTGTACCATGCGTCTTGGATCAAGAAGAACGTATTTTAGAGTCAAAGATTCTAAATCTGTAAAACTATCAGTACTTCCTTTCCTCCAACCTCACTGCATTGGCTGTATCTTGATCTGTAGCCATTTTGGAGGACTTCTCCTATTGATATTACCAAGTGCCTAAACTATATTGTTTCTCAGATGTCGCAACCGGAGCTTTGTTGATGAAAGGCACCGTCATAGATATGAGGTTCAGCACTTTTTTTTCTTTAAATTTGGAATTGTGGTGTAACTACTGTGCATCTAGGTGGACAAGTTTAATAATTATATGTGGACCATAAGATGTGATGTCTTTAGTAAGGGATGCATGCCAAAAATTTATCCTGTGCTATGTAGGTGAATCTTGATATGGTGCAGAAATTTGAAGATGCTTGTCTTTCTTTCCCTGGCAAAGATGAAAGTGATCGGTACATGGAGGTGAGCCTTTTATATAATTGAAATTATGAAGTCATGATAGATATTCGTAGTGTTGTTGTTGATTTTATTATAATTATGAAGCCATTGAATGGGAAGATGTGGAGTTTTTCTTGTTGAAGGCCCCACTCACACTACACTAAAAAAAACAAGTAGTTTAATTATAAGATTGTGATTTGTAGTATTTTGACACTCGATGGGACAGGCTTTCCTGTACACCCTCAGTGGTCATTTTCTTTTACATGGTTTTGACCTTTCGATTTTGATTGTTCCTTAAAACTTGAAAATTGTGTCAAGTAAGAGAATGGGGAAGTATATGTTTTCTGATTTTGTTAACGCTTTGAGGATCAACGGAGGTGGGCTGCTGAGAAATATGTCAAGTCGTTCTTTAATGCAATTTTAATCGCTTAGAGTAGTTACACAGAAGGCAGTGATCGGTGAGGCTTTTCAATGAATCCTTATGTTCCTTGGTTTGCTACTTCTGATTACGATTATATGCTTGTTATTCTTATAAGTAGATTGCTCCTAGTTTGAACTTAACCCAGTTTCTATCAGGTAATGTTGCAATAGGAATTGGGACCTGCTATGTTAAGGTGGATGACAATGGTAAGTGTTAGTTTCTTTGACATTGTTCTAATGCATTTAATGTGCTGAAAGTTCTGCTCATTATATGACTTAATCATCTGTAGCTGTACCTTCTTTTGAAGGATCATTTGAGGTTGTACTTTCTTTTGAAGGATCTCGTGTTTCACGAGATGAACGAGTGCTGATGGAAAAAATTTGGTGATCTTTTTGCAAAATGTTGAACTGACATCATCTTTTCTATTGTATTGATACTGCTGTACATAATTTCTTTTGCGTGACAACTATGATGTTCATAATTGAATGCTTGTGGTAGTCTATAGGATTGCATACATTACTCAACTAATAGTTTGTTTGATAGTTTGTGTTCATTAGTATTCTTTCACAGATGTTGTTTTATTTATTGTTTGCGGTTTTATTTGTAATTGGGCAAACTTGTATGGCTGTACACCACAAAATTTTGATGCTTACACTTTGGTTTTACTTTATTGTATGGCGTTCATGAACATTGTTTCCTGGTTCTTCATTTGCAATAAAATACTTTCTATACCTGTACGGCCTGCCCAAAAAAAAGGGGGGGGACGGGGGATAAAATATAATTTTTGTTGACCACTTCTGTATGTAGAGAGATGTTTTGATTACTTAATCTAGCTGAAGTTGAGCTAGAACATACATATTCGTTTGTATGTATTATTTTCCCAGCTTATGGAGACAACATATAGGCCCGTTCTTTCATCTTGTATCATAGTTTCTTTTTGCCTGGCCATTTTAATTAAATAATGTTTTATATGCTTCCTTTACACCACCGACATCAAAATTCTGCCATTCAAATGTTATGCTTGCTTTCCCAGCATGTTTTGGCTTTAAAAGAGAGGTTTTGAGCTTTATTTCTAACCTTTTTTTGTTGGAAATTGTTACTAAAACCCATGGGATTCCAAATGGATATCGAAAGGTTTTAAAGGTAAAGTTCTTCTGAGATTTAGTTGGTAGTATCCATTAGGATAGGTATAAAACTACTAATCTGGTCTTTGTTTTTTCCATTGTTTACCGTATGACAAGTGTTTGTACCTTGGAATCAATTATTGTAGATAAGAAACTCTCAAGAATTATTTGATACCATGAGCTGTGCACTCCTCTAGGGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAGGTAATTTGTCTTTTGTGCTTGTTTGTGTTAATAATCAATTATGACAGGAAGTGTGTGCAACTAATTAATGTTCTTTTCGATCATGCAGAAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAGGTAATGTTATCAAATTTCTTGGGAGGGTTAGGTTCTTTCTGATATTAATTACTCACACGACCTGATGTTTCTCCCTTCAGGCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAGGTAGATCATTCTTGCCTTTTGTTCCTGACCTGAATAGGTGCTGAATTTTTTTAGTGCATGTTTCAGTCATACAGCTATTCCATTTTACCATGGCAAGAAGTTTCTTAGATTCTGGGACAAAATGCAGGGACTTCTGTCCAGTGATTAAATATGCTAACACTGTTAATCTTTGGTATTATTCTAGAGACTCGAGAGCTTTTGAGGATACTTTTTTATGCATCCTATGTTTCAAATGGTATCAGCTTACCTCTTTCAGTTTTTAGAGTTACTGAGTTAGTATCTTTTCTCTTCTTTGATGTAATAAAGAGAGAAATATATTAATGACATGGATCTTAGAGGAAGTTGCTTCGTTTGAACACTTTAAATCTACTTTAACGTTCTAACAGTTTTAATAAATACAAGAAATTGTTAATTAGAATGTGGGAGGATTAAGGAAAAGCGAGAATAGGCTCTGAAGAAGTGACAATTTTCATATTTTTCTTGACGAGCGGAGGAAGTGGGAGCACATGTAAACAGAAGACTGTGTTTAGTTCTTGGTTTTTGATTGCAGACCATGGAGTAGATCAAACCTGAGAACTGTTGCACTTTTTAGGATTACTGGATCTTGTTTCACTGATTACTTTGTCTGATAATGCAGATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAAGTAAATACAGAACCAAACAAAATCACCTATAATATGATTTTAGTGTTGAATTTGAAGTAGCTGAGGATGTTAATCAGGTCTTAAATCATAGGTCTCTTTCAGGTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGTATGATTCCGTCCTGCCATATTTTAGTCCAGAACCGCGTCTCTTCTGTCACCAGATATCGGGACCTGGTTTCGAGATGTTAATCCTTACATTGCTGAAAATGGGATTGAAACTTCTGTTGAACATGAAGTTGGTCTCACGTATATTTTTAGAAACATGGAACATAATTTCGTTGTTCCTGCCATAAATAATTTGAGAAAAGACGACTGCTTGTTCCCAAATCCTGCAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCT</genome_strand>
        <mrna_strand>AGTTCACAGGGTTCAAAATCGCATATGGGTGTACCATGCGTCTTGGATCAAGAAGAACGTATTTTAGAGTCAAAGATTCTAAATCTGTAAAACTATCA..............................................................................................................ATGTCGCAACCGGAGCTTTGTTGATGAAAGGCACCGTCATAGATATGAG..................................................................................................................................................GTGAATCTTGATATGGTGCAGAAATTTGAAGATGCTTGTCTTTCTTTCCCTGGCAAAGATGAAAGTGATCGGTACATGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATGTTGCAATAGGAATTGGGACCTGCTATGTTAAGGTGGATGACAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAG........................................................................................AAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAG................................................................................GCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATGGAACTCGGGTAAATGGATTGATACGGGGAATCANGGTAAAACAGATGAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E538636" ref_strand="+" ref_description="SGN-E538636 [TUS-57-P17]">
      <seq>agttcacagggttcaaaatcgcatatgggtgtaccatgcgtcttggatcaagaagaacgtattttagagtcaaagattctaaatctgtaaaactatcaatgtcgcaaccggagctttgttgatgaaaggcaccgtcatagatatgaggtgaatcttgatatggtgcagaaatttgaagatgcttgtctttctttccctggcaaagatgaaagtgatcggtacatggaggtaatgttgcaataggaattgggacctgctatgttaaggtggatgacaatgggtggatggggactcacataaatggattgatgcttgaaatcgaggtaaaacagataagtcttacaaggaagaagaagtcatacaactcttccattttaccatggcaagaagttctttgccacgagtgagtcttcaagaaaggcagaaggaaataataatattaagacagttcatgatgtgttactcatgccagaaactagaactgtaaggagactgcatcattctacagaagctatctggctggagcttccacgacagtcatgagtcatcccatcaatgtgattaatcttcaacccatgacagtgtattttctgatggaaggccaagtgtgaaaatggaacctgtcaacatctgaaataacaattacaagctcaaggggagtgctcaagtacgcacaatggggagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="88325" stop="91701"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88625" g_stop="88722" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88723" i_stop="88832" i_length="110">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88833" g_stop="88881" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="147" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88882" i_stop="89027" i_length="146">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89028" g_stop="89108" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="228" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89109" i_stop="89660" i_length="552">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.898" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="89661" g_stop="89711" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="279" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="89712" i_stop="90826" i_length="1115">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.446" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="90827" g_stop="91019" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="472" r_length="193" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="91020" i_stop="91107" i_length="88">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="91108" g_stop="91235" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="600" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="91236" i_stop="91315" i_length="80">
            <donor d_prob="0.885" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="91316" g_stop="91401" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="601" r_stop="686" r_length="86" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E538636" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>686</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E538636" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88625" e_stop="88722"/>
          <exon e_start="88833" e_stop="88881"/>
          <exon e_start="89028" e_stop="89108"/>
          <exon e_start="89661" e_stop="89711"/>
          <exon e_start="90827" e_stop="91019"/>
          <exon e_start="91108" e_stop="91235"/>
          <exon e_start="91316" e_stop="91401"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTCACAGGGTTCAAAATCGCATATGGGTGTACCATGCGTCTTGGATCAAGAAGAACGTATTTTAGAGTCAAAGATTCTAAATCTGTAAAACTATCAGTACTTCCTTTCCTCCAACCTCACTGCATTGGCTGTATCTTGATCTGTAGCCATTTTGGAGGACTTCTCCTATTGATATTACCAAGTGCCTAAACTATATTGTTTCTCAGATGTCGCAACCGGAGCTTTGTTGATGAAAGGCACCGTCATAGATATGAGGTTCAGCACTTTTTTTTCTTTAAATTTGGAATTGTGGTGTAACTACTGTGCATCTAGGTGGACAAGTTTAATAATTATATGTGGACCATAAGATGTGATGTCTTTAGTAAGGGATGCATGCCAAAAATTTATCCTGTGCTATGTAGGTGAATCTTGATATGGTGCAGAAATTTGAAGATGCTTGTCTTTCTTTCCCTGGCAAAGATGAAAGTGATCGGTACATGGAGGTGAGCCTTTTATATAATTGAAATTATGAAGTCATGATAGATATTCGTAGTGTTGTTGTTGATTTTATTATAATTATGAAGCCATTGAATGGGAAGATGTGGAGTTTTTCTTGTTGAAGGCCCCACTCACACTACACTAAAAAAAACAAGTAGTTTAATTATAAGATTGTGATTTGTAGTATTTTGACACTCGATGGGACAGGCTTTCCTGTACACCCTCAGTGGTCATTTTCTTTTACATGGTTTTGACCTTTCGATTTTGATTGTTCCTTAAAACTTGAAAATTGTGTCAAGTAAGAGAATGGGGAAGTATATGTTTTCTGATTTTGTTAACGCTTTGAGGATCAACGGAGGTGGGCTGCTGAGAAATATGTCAAGTCGTTCTTTAATGCAATTTTAATCGCTTAGAGTAGTTACACAGAAGGCAGTGATCGGTGAGGCTTTTCAATGAATCCTTATGTTCCTTGGTTTGCTACTTCTGATTACGATTATATGCTTGTTATTCTTATAAGTAGATTGCTCCTAGTTTGAACTTAACCCAGTTTCTATCAGGTAATGTTGCAATAGGAATTGGGACCTGCTATGTTAAGGTGGATGACAATGGTAAGTGTTAGTTTCTTTGACATTGTTCTAATGCATTTAATGTGCTGAAAGTTCTGCTCATTATATGACTTAATCATCTGTAGCTGTACCTTCTTTTGAAGGATCATTTGAGGTTGTACTTTCTTTTGAAGGATCTCGTGTTTCACGAGATGAACGAGTGCTGATGGAAAAAATTTGGTGATCTTTTTGCAAAATGTTGAACTGACATCATCTTTTCTATTGTATTGATACTGCTGTACATAATTTCTTTTGCGTGACAACTATGATGTTCATAATTGAATGCTTGTGGTAGTCTATAGGATTGCATACATTACTCAACTAATAGTTTGTTTGATAGTTTGTGTTCATTAGTATTCTTTCACAGATGTTGTTTTATTTATTGTTTGCGGTTTTATTTGTAATTGGGCAAACTTGTATGGCTGTACACCACAAAATTTTGATGCTTACACTTTGGTTTTACTTTATTGTATGGCGTTCATGAACATTGTTTCCTGGTTCTTCATTTGCAATAAAATACTTTCTATACCTGTACGGCCTGCCCAAAAAAAAGGGGGGGGACGGGGGATAAAATATAATTTTTGTTGACCACTTCTGTATGTAGAGAGATGTTTTGATTACTTAATCTAGCTGAAGTTGAGCTAGAACATACATATTCGTTTGTATGTATTATTTTCCCAGCTTATGGAGACAACATATAGGCCCGTTCTTTCATCTTGTATCATAGTTTCTTTTTGCCTGGCCATTTTAATTAAATAATGTTTTATATGCTTCCTTTACACCACCGACATCAAAATTCTGCCATTCAAATGTTATGCTTGCTTTCCCAGCATGTTTTGGCTTTAAAAGAGAGGTTTTGAGCTTTATTTCTAACCTTTTTTTGTTGGAAATTGTTACTAAAACCCATGGGATTCCAAATGGATATCGAAAGGTTTTAAAGGTAAAGTTCTTCTGAGATTTAGTTGGTAGTATCCATTAGGATAGGTATAAAACTACTAATCTGGTCTTTGTTTTTTCCATTGTTTACCGTATGACAAGTGTTTGTACCTTGGAATCAATTATTGTAGATAAGAAACTCTCAAGAATTATTTGATACCATGAGCTGTGCACTCCTCTAGGGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAGGTAATTTGTCTTTTGTGCTTGTTTGTGTTAATAATCAATTATGACAGGAAGTGTGTGCAACTAATTAATGTTCTTTTCGATCATGCAGAAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAGGTAATGTTATCAAATTTCTTGGGAGGGTTAGGTTCTTTCTGATATTAATTACTCACACGACCTGATGTTTCTCCCTTCAGGCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTC</genome_strand>
        <mrna_strand>AGTTCACAGGGTTCAAAATCGCATATGGGTGTACCATGCGTCTTGGATCAAGAAGAACGTATTTTAGAGTCAAAGATTCTAAATCTGTAAAACTATCA..............................................................................................................ATGTCGCAACCGGAGCTTTGTTGATGAAAGGCACCGTCATAGATATGAG..................................................................................................................................................GTGAATCTTGATATGGTGCAGAAATTTGAAGATGCTTGTCTTTCTTTCCCTGGCAAAGATGAAAGTGATCGGTACATGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATGTTGCAATAGGAATTGGGACCTGCTATGTTAAGGTGGATGACAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAG........................................................................................AAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAG................................................................................GCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E272165" ref_strand="+" ref_description="SGN-E272165 [cLEN-4-K5]">
      <seq>cagggttcaaaatcgcatatgggtgtaccatgcgtcttggatcaagaagaacgtattttagagtcaaagattctaaatctgtaaaactatcaatgtcgcaaccggagctttgttgatgaaaggcaccgtcatagatatgaggtgaatcttgatatggtgcagaaatttgaagatgcttgtctttctttccctggcaaagatgaaagtgatcggtacatggaggtaatgttgcaataggaattgggacctgctatgttaaggtggatgacaatgggtggatggggactcacataaatggattgatgcttgaaatcgaggtaaaacagataagtcttacaaggaagaagaagtcatacaactcttccattttaccatggcaagaagttctttgccacgagtgagtcttcaagaaaggcagaaggaaataataatattaagacagttcatgatgtgttactcatgccagaaactagaactgtaaggagactgcatcattctacagaagctatctggctggagcttccacgacagtcatgagtcatcccatcaatgtgattaatcttcaacccatgacagtgtattttctgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="88331" stop="91531"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88631" g_stop="88722" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88723" i_stop="88832" i_length="110">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88833" g_stop="88881" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="141" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88882" i_stop="89027" i_length="146">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89028" g_stop="89108" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="222" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89109" i_stop="89660" i_length="552">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.898" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="89661" g_stop="89711" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="273" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="89712" i_stop="90826" i_length="1115">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.446" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="90827" g_stop="91019" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="466" r_length="193" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="91020" i_stop="91107" i_length="88">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="91108" g_stop="91231" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="590" r_length="124" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E272165" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>590</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E272165" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88631" e_stop="88722"/>
          <exon e_start="88833" e_stop="88881"/>
          <exon e_start="89028" e_stop="89108"/>
          <exon e_start="89661" e_stop="89711"/>
          <exon e_start="90827" e_stop="91019"/>
          <exon e_start="91108" e_stop="91231"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGGTTCAAAATCGCATATGGGTGTACCATGCGTCTTGGATCAAGAAGAACGTATTTTAGAGTCAAAGATTCTAAATCTGTAAAACTATCAGTACTTCCTTTCCTCCAACCTCACTGCATTGGCTGTATCTTGATCTGTAGCCATTTTGGAGGACTTCTCCTATTGATATTACCAAGTGCCTAAACTATATTGTTTCTCAGATGTCGCAACCGGAGCTTTGTTGATGAAAGGCACCGTCATAGATATGAGGTTCAGCACTTTTTTTTCTTTAAATTTGGAATTGTGGTGTAACTACTGTGCATCTAGGTGGACAAGTTTAATAATTATATGTGGACCATAAGATGTGATGTCTTTAGTAAGGGATGCATGCCAAAAATTTATCCTGTGCTATGTAGGTGAATCTTGATATGGTGCAGAAATTTGAAGATGCTTGTCTTTCTTTCCCTGGCAAAGATGAAAGTGATCGGTACATGGAGGTGAGCCTTTTATATAATTGAAATTATGAAGTCATGATAGATATTCGTAGTGTTGTTGTTGATTTTATTATAATTATGAAGCCATTGAATGGGAAGATGTGGAGTTTTTCTTGTTGAAGGCCCCACTCACACTACACTAAAAAAAACAAGTAGTTTAATTATAAGATTGTGATTTGTAGTATTTTGACACTCGATGGGACAGGCTTTCCTGTACACCCTCAGTGGTCATTTTCTTTTACATGGTTTTGACCTTTCGATTTTGATTGTTCCTTAAAACTTGAAAATTGTGTCAAGTAAGAGAATGGGGAAGTATATGTTTTCTGATTTTGTTAACGCTTTGAGGATCAACGGAGGTGGGCTGCTGAGAAATATGTCAAGTCGTTCTTTAATGCAATTTTAATCGCTTAGAGTAGTTACACAGAAGGCAGTGATCGGTGAGGCTTTTCAATGAATCCTTATGTTCCTTGGTTTGCTACTTCTGATTACGATTATATGCTTGTTATTCTTATAAGTAGATTGCTCCTAGTTTGAACTTAACCCAGTTTCTATCAGGTAATGTTGCAATAGGAATTGGGACCTGCTATGTTAAGGTGGATGACAATGGTAAGTGTTAGTTTCTTTGACATTGTTCTAATGCATTTAATGTGCTGAAAGTTCTGCTCATTATATGACTTAATCATCTGTAGCTGTACCTTCTTTTGAAGGATCATTTGAGGTTGTACTTTCTTTTGAAGGATCTCGTGTTTCACGAGATGAACGAGTGCTGATGGAAAAAATTTGGTGATCTTTTTGCAAAATGTTGAACTGACATCATCTTTTCTATTGTATTGATACTGCTGTACATAATTTCTTTTGCGTGACAACTATGATGTTCATAATTGAATGCTTGTGGTAGTCTATAGGATTGCATACATTACTCAACTAATAGTTTGTTTGATAGTTTGTGTTCATTAGTATTCTTTCACAGATGTTGTTTTATTTATTGTTTGCGGTTTTATTTGTAATTGGGCAAACTTGTATGGCTGTACACCACAAAATTTTGATGCTTACACTTTGGTTTTACTTTATTGTATGGCGTTCATGAACATTGTTTCCTGGTTCTTCATTTGCAATAAAATACTTTCTATACCTGTACGGCCTGCCCAAAAAAAAGGGGGGGGACGGGGGATAAAATATAATTTTTGTTGACCACTTCTGTATGTAGAGAGATGTTTTGATTACTTAATCTAGCTGAAGTTGAGCTAGAACATACATATTCGTTTGTATGTATTATTTTCCCAGCTTATGGAGACAACATATAGGCCCGTTCTTTCATCTTGTATCATAGTTTCTTTTTGCCTGGCCATTTTAATTAAATAATGTTTTATATGCTTCCTTTACACCACCGACATCAAAATTCTGCCATTCAAATGTTATGCTTGCTTTCCCAGCATGTTTTGGCTTTAAAAGAGAGGTTTTGAGCTTTATTTCTAACCTTTTTTTGTTGGAAATTGTTACTAAAACCCATGGGATTCCAAATGGATATCGAAAGGTTTTAAAGGTAAAGTTCTTCTGAGATTTAGTTGGTAGTATCCATTAGGATAGGTATAAAACTACTAATCTGGTCTTTGTTTTTTCCATTGTTTACCGTATGACAAGTGTTTGTACCTTGGAATCAATTATTGTAGATAAGAAACTCTCAAGAATTATTTGATACCATGAGCTGTGCACTCCTCTAGGGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAGGTAATTTGTCTTTTGTGCTTGTTTGTGTTAATAATCAATTATGACAGGAAGTGTGTGCAACTAATTAATGTTCTTTTCGATCATGCAGAAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATG</genome_strand>
        <mrna_strand>CAGGGTTCAAAATCGCATATGGGTGTACCATGCGTCTTGGATCAAGAAGAACGTATTTTAGAGTCAAAGATTCTAAATCTGTAAAACTATCA..............................................................................................................ATGTCGCAACCGGAGCTTTGTTGATGAAAGGCACCGTCATAGATATGAG..................................................................................................................................................GTGAATCTTGATATGGTGCAGAAATTTGAAGATGCTTGTCTTTCTTTCCCTGGCAAAGATGAAAGTGATCGGTACATGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATGTTGCAATAGGAATTGGGACCTGCTATGTTAAGGTGGATGACAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAG........................................................................................AAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E243034" ref_strand="+" ref_description="SGN-E243034 [cLEF-1-L21]">
      <seq>atcgcatatgggtgtaccatgcgtcttggatcaagaagaacgtattttagagtcaaagattctaaatctgtaaaactatcaatgtcgcaaccggagctttgttgatgaaaggcaccgtcatagatatgaggtgaatcttgatatggtgcagaaatttgaagatgcttgtctttctttccctggcaaagatgaaagtgatcggtacatggaggtaatgttgcaataggaattgggacctgctatgttaaggtggatgacaatgggtggatggggactcacataaatggattgatgcttgaaatcgaggtaaaacagataagtcttacaaggaagaagaagtcatacaactcttccattttaccatggcaagaagttctttgccacgagtgagtcttcaagaaaggcagaaggaaataataatattaagacagttcatgatgtgttactcatgccagaaactagaactgtaaggagactgcatcattctacagaagctatctggctggagcttccacgacagtcatgagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="88342" stop="91480"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88642" g_stop="88722" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88723" i_stop="88832" i_length="110">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88833" g_stop="88881" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="130" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88882" i_stop="89027" i_length="146">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89028" g_stop="89108" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="211" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89109" i_stop="89660" i_length="552">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.898" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="89661" g_stop="89711" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="262" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="89712" i_stop="90826" i_length="1115">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.446" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="90827" g_stop="91019" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="455" r_length="193" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="91020" i_stop="91107" i_length="88">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="91108" g_stop="91180" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="528" r_length="73" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E243034" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>528</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E243034" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88642" e_stop="88722"/>
          <exon e_start="88833" e_stop="88881"/>
          <exon e_start="89028" e_stop="89108"/>
          <exon e_start="89661" e_stop="89711"/>
          <exon e_start="90827" e_stop="91019"/>
          <exon e_start="91108" e_stop="91180"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGCATATGGGTGTACCATGCGTCTTGGATCAAGAAGAACGTATTTTAGAGTCAAAGATTCTAAATCTGTAAAACTATCAGTACTTCCTTTCCTCCAACCTCACTGCATTGGCTGTATCTTGATCTGTAGCCATTTTGGAGGACTTCTCCTATTGATATTACCAAGTGCCTAAACTATATTGTTTCTCAGATGTCGCAACCGGAGCTTTGTTGATGAAAGGCACCGTCATAGATATGAGGTTCAGCACTTTTTTTTCTTTAAATTTGGAATTGTGGTGTAACTACTGTGCATCTAGGTGGACAAGTTTAATAATTATATGTGGACCATAAGATGTGATGTCTTTAGTAAGGGATGCATGCCAAAAATTTATCCTGTGCTATGTAGGTGAATCTTGATATGGTGCAGAAATTTGAAGATGCTTGTCTTTCTTTCCCTGGCAAAGATGAAAGTGATCGGTACATGGAGGTGAGCCTTTTATATAATTGAAATTATGAAGTCATGATAGATATTCGTAGTGTTGTTGTTGATTTTATTATAATTATGAAGCCATTGAATGGGAAGATGTGGAGTTTTTCTTGTTGAAGGCCCCACTCACACTACACTAAAAAAAACAAGTAGTTTAATTATAAGATTGTGATTTGTAGTATTTTGACACTCGATGGGACAGGCTTTCCTGTACACCCTCAGTGGTCATTTTCTTTTACATGGTTTTGACCTTTCGATTTTGATTGTTCCTTAAAACTTGAAAATTGTGTCAAGTAAGAGAATGGGGAAGTATATGTTTTCTGATTTTGTTAACGCTTTGAGGATCAACGGAGGTGGGCTGCTGAGAAATATGTCAAGTCGTTCTTTAATGCAATTTTAATCGCTTAGAGTAGTTACACAGAAGGCAGTGATCGGTGAGGCTTTTCAATGAATCCTTATGTTCCTTGGTTTGCTACTTCTGATTACGATTATATGCTTGTTATTCTTATAAGTAGATTGCTCCTAGTTTGAACTTAACCCAGTTTCTATCAGGTAATGTTGCAATAGGAATTGGGACCTGCTATGTTAAGGTGGATGACAATGGTAAGTGTTAGTTTCTTTGACATTGTTCTAATGCATTTAATGTGCTGAAAGTTCTGCTCATTATATGACTTAATCATCTGTAGCTGTACCTTCTTTTGAAGGATCATTTGAGGTTGTACTTTCTTTTGAAGGATCTCGTGTTTCACGAGATGAACGAGTGCTGATGGAAAAAATTTGGTGATCTTTTTGCAAAATGTTGAACTGACATCATCTTTTCTATTGTATTGATACTGCTGTACATAATTTCTTTTGCGTGACAACTATGATGTTCATAATTGAATGCTTGTGGTAGTCTATAGGATTGCATACATTACTCAACTAATAGTTTGTTTGATAGTTTGTGTTCATTAGTATTCTTTCACAGATGTTGTTTTATTTATTGTTTGCGGTTTTATTTGTAATTGGGCAAACTTGTATGGCTGTACACCACAAAATTTTGATGCTTACACTTTGGTTTTACTTTATTGTATGGCGTTCATGAACATTGTTTCCTGGTTCTTCATTTGCAATAAAATACTTTCTATACCTGTACGGCCTGCCCAAAAAAAAGGGGGGGGACGGGGGATAAAATATAATTTTTGTTGACCACTTCTGTATGTAGAGAGATGTTTTGATTACTTAATCTAGCTGAAGTTGAGCTAGAACATACATATTCGTTTGTATGTATTATTTTCCCAGCTTATGGAGACAACATATAGGCCCGTTCTTTCATCTTGTATCATAGTTTCTTTTTGCCTGGCCATTTTAATTAAATAATGTTTTATATGCTTCCTTTACACCACCGACATCAAAATTCTGCCATTCAAATGTTATGCTTGCTTTCCCAGCATGTTTTGGCTTTAAAAGAGAGGTTTTGAGCTTTATTTCTAACCTTTTTTTGTTGGAAATTGTTACTAAAACCCATGGGATTCCAAATGGATATCGAAAGGTTTTAAAGGTAAAGTTCTTCTGAGATTTAGTTGGTAGTATCCATTAGGATAGGTATAAAACTACTAATCTGGTCTTTGTTTTTTCCATTGTTTACCGTATGACAAGTGTTTGTACCTTGGAATCAATTATTGTAGATAAGAAACTCTCAAGAATTATTTGATACCATGAGCTGTGCACTCCTCTAGGGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAGGTAATTTGTCTTTTGTGCTTGTTTGTGTTAATAATCAATTATGACAGGAAGTGTGTGCAACTAATTAATGTTCTTTTCGATCATGCAGAAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGT</genome_strand>
        <mrna_strand>ATCGCATATGGGTGTACCATGCGTCTTGGATCAAGAAGAACGTATTTTAGAGTCAAAGATTCTAAATCTGTAAAACTATCA..............................................................................................................ATGTCGCAACCGGAGCTTTGTTGATGAAAGGCACCGTCATAGATATGAG..................................................................................................................................................GTGAATCTTGATATGGTGCAGAAATTTGAAGATGCTTGTCTTTCTTTCCCTGGCAAAGATGAAAGTGATCGGTACATGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATGTTGCAATAGGAATTGGGACCTGCTATGTTAAGGTGGATGACAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAG........................................................................................AAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E264191" ref_strand="+" ref_description="SGN-E264191 [cLEG-64-L12]">
      <seq>ggagctttgttgatgaaaggcaccgtcatagatatgaggtgaatcttgatatggtgcagaaatttgaagatgcttgtctttctttccctggcaaagatgaaagtgatcggtacatggaggtaatgttgcaataggaattgggacctgctatgttaaggtggatgacaatgggtggatggggactcacataaatggattgatgcttgaaatcgaggtaaaacagataagtcttacaaggaagaagaagtcatacaactcttccattttaccatggcaagaagttctttgccacgagtgagtcttcaagaaaggcagaaggaaataataatattaagacagttcatgatgtgttactcatgccagaaactagaactgtaaggagactgcatcattctacagaagctatctggctggagcttccacgacagtcatgagtcatcccatcaatgtgattaatcttcaacccatgacagtgtattttctgatggaaggccaagtgtgaaaatggaacctgtcaacatctgaaataacaattacaagctcaaggggagtgctcaagtacgcacaatggggagtcaaaagaagatattttgctatgaactggattaggaagctatcaatggcatgttatttatttgttagaaatgctgctcatcccagttcaacatttctactttgtgttccatatgtaggttaagagaggagtagtttgaattattatctcaaaaatganaataaaaagaagtttgaatgttggtatataccgtccttaagctgacttttctaaatgatgcttcacaatcaagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="88544" stop="92569"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88844" g_stop="88881" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="38" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88882" i_stop="89027" i_length="146">
            <donor d_prob="0.992" d_score="0.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89028" g_stop="89108" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="119" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89109" i_stop="89660" i_length="552">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.898" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89661" g_stop="89711" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="170" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89712" i_stop="90826" i_length="1115">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.446" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90827" g_stop="91019" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="363" r_length="193" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="91020" i_stop="91107" i_length="88">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="91108" g_stop="91235" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="491" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="91236" i_stop="91315" i_length="80">
            <donor d_prob="0.885" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="91316" g_stop="91409" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="585" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="91410" i_stop="92046" i_length="637">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="92047" g_stop="92269" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="586" r_stop="808" r_length="223" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E264191" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>808</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E264191" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88844" e_stop="88881"/>
          <exon e_start="89028" e_stop="89108"/>
          <exon e_start="89661" e_stop="89711"/>
          <exon e_start="90827" e_stop="91019"/>
          <exon e_start="91108" e_stop="91235"/>
          <exon e_start="91316" e_stop="91409"/>
          <exon e_start="92047" e_stop="92269"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGCTTTGTTGATGAAAGGCACCGTCATAGATATGAGGTTCAGCACTTTTTTTTCTTTAAATTTGGAATTGTGGTGTAACTACTGTGCATCTAGGTGGACAAGTTTAATAATTATATGTGGACCATAAGATGTGATGTCTTTAGTAAGGGATGCATGCCAAAAATTTATCCTGTGCTATGTAGGTGAATCTTGATATGGTGCAGAAATTTGAAGATGCTTGTCTTTCTTTCCCTGGCAAAGATGAAAGTGATCGGTACATGGAGGTGAGCCTTTTATATAATTGAAATTATGAAGTCATGATAGATATTCGTAGTGTTGTTGTTGATTTTATTATAATTATGAAGCCATTGAATGGGAAGATGTGGAGTTTTTCTTGTTGAAGGCCCCACTCACACTACACTAAAAAAAACAAGTAGTTTAATTATAAGATTGTGATTTGTAGTATTTTGACACTCGATGGGACAGGCTTTCCTGTACACCCTCAGTGGTCATTTTCTTTTACATGGTTTTGACCTTTCGATTTTGATTGTTCCTTAAAACTTGAAAATTGTGTCAAGTAAGAGAATGGGGAAGTATATGTTTTCTGATTTTGTTAACGCTTTGAGGATCAACGGAGGTGGGCTGCTGAGAAATATGTCAAGTCGTTCTTTAATGCAATTTTAATCGCTTAGAGTAGTTACACAGAAGGCAGTGATCGGTGAGGCTTTTCAATGAATCCTTATGTTCCTTGGTTTGCTACTTCTGATTACGATTATATGCTTGTTATTCTTATAAGTAGATTGCTCCTAGTTTGAACTTAACCCAGTTTCTATCAGGTAATGTTGCAATAGGAATTGGGACCTGCTATGTTAAGGTGGATGACAATGGTAAGTGTTAGTTTCTTTGACATTGTTCTAATGCATTTAATGTGCTGAAAGTTCTGCTCATTATATGACTTAATCATCTGTAGCTGTACCTTCTTTTGAAGGATCATTTGAGGTTGTACTTTCTTTTGAAGGATCTCGTGTTTCACGAGATGAACGAGTGCTGATGGAAAAAATTTGGTGATCTTTTTGCAAAATGTTGAACTGACATCATCTTTTCTATTGTATTGATACTGCTGTACATAATTTCTTTTGCGTGACAACTATGATGTTCATAATTGAATGCTTGTGGTAGTCTATAGGATTGCATACATTACTCAACTAATAGTTTGTTTGATAGTTTGTGTTCATTAGTATTCTTTCACAGATGTTGTTTTATTTATTGTTTGCGGTTTTATTTGTAATTGGGCAAACTTGTATGGCTGTACACCACAAAATTTTGATGCTTACACTTTGGTTTTACTTTATTGTATGGCGTTCATGAACATTGTTTCCTGGTTCTTCATTTGCAATAAAATACTTTCTATACCTGTACGGCCTGCCCAAAAAAAAGGGGGGGGACGGGGGATAAAATATAATTTTTGTTGACCACTTCTGTATGTAGAGAGATGTTTTGATTACTTAATCTAGCTGAAGTTGAGCTAGAACATACATATTCGTTTGTATGTATTATTTTCCCAGCTTATGGAGACAACATATAGGCCCGTTCTTTCATCTTGTATCATAGTTTCTTTTTGCCTGGCCATTTTAATTAAATAATGTTTTATATGCTTCCTTTACACCACCGACATCAAAATTCTGCCATTCAAATGTTATGCTTGCTTTCCCAGCATGTTTTGGCTTTAAAAGAGAGGTTTTGAGCTTTATTTCTAACCTTTTTTTGTTGGAAATTGTTACTAAAACCCATGGGATTCCAAATGGATATCGAAAGGTTTTAAAGGTAAAGTTCTTCTGAGATTTAGTTGGTAGTATCCATTAGGATAGGTATAAAACTACTAATCTGGTCTTTGTTTTTTCCATTGTTTACCGTATGACAAGTGTTTGTACCTTGGAATCAATTATTGTAGATAAGAAACTCTCAAGAATTATTTGATACCATGAGCTGTGCACTCCTCTAGGGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAGGTAATTTGTCTTTTGTGCTTGTTTGTGTTAATAATCAATTATGACAGGAAGTGTGTGCAACTAATTAATGTTCTTTTCGATCATGCAGAAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAGGTAATGTTATCAAATTTCTTGGGAGGGTTAGGTTCTTTCTGATATTAATTACTCACACGACCTGATGTTTCTCCCTTCAGGCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAGGTAGATCATTCTTGCCTTTTGTTCCTGACCTGAATAGGTGCTGAATTTTTTTAGTGCATGTTTCAGTCATACAGCTATTCCATTTTACCATGGCAAGAAGTTTCTTAGATTCTGGGACAAAATGCAGGGACTTCTGTCCAGTGATTAAATATGCTAACACTGTTAATCTTTGGTATTATTCTAGAGACTCGAGAGCTTTTGAGGATACTTTTTTATGCATCCTATGTTTCAAATGGTATCAGCTTACCTCTTTCAGTTTTTAGAGTTACTGAGTTAGTATCTTTTCTCTTCTTTGATGTAATAAAGAGAGAAATATATTAATGACATGGATCTTAGAGGAAGTTGCTTCGTTTGAACACTTTAAATCTACTTTAACGTTCTAACAGTTTTAATAAATACAAGAAATTGTTAATTAGAATGTGGGAGGATTAAGGAAAAGCGAGAATAGGCTCTGAAGAAGTGACAATTTTCATATTTTTCTTGACGAGCGGAGGAAGTGGGAGCACATGTAAACAGAAGACTGTGTTTAGTTCTTGGTTTTTGATTGCAGACCATGGAGTAGATCAAACCTGAGAACTGTTGCACTTTTTAGGATTACTGGATCTTGTTTCACTGATTACTTTGTCTGATAATGCAGATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCT</genome_strand>
        <mrna_strand>GGAGCTTTGTTGATGAAAGGCACCGTCATAGATATGAG..................................................................................................................................................GTGAATCTTGATATGGTGCAGAAATTTGAAGATGCTTGTCTTTCTTTCCCTGGCAAAGATGAAAGTGATCGGTACATGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATGTTGCAATAGGAATTGGGACCTGCTATGTTAAGGTGGATGACAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAG........................................................................................AAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAG................................................................................GCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGANAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E256214" ref_strand="+" ref_description="SGN-E256214 [cLEG-37-O4]">
      <seq>tgcactcctctagggtggatggggactcacataaatggattgatgcttgaaatcgaggtaaaacagataagtcttacaaggaagaagaagtcatacaactcttccattttaccatggcaagaagttctttgccacgagtgagtcttcaagaaaggcagaaggaaataataatattaagacagttcatgatgtgttactcatgccagaaactagaactgtaaggagactgcatcattctacagaagctatctggctggagcttccacgacagtcatgagtcatcccatcaatgtgattaatcttcaacccatgacagtgtattttctgatggaaggccaagtgtgaaaatggaacctgtcaacatctgaaataacaattacaagctcaaggggagtgctcaagtacgcacaatggggagtcaaaagaagggtggatggaactcgggtaaatggattgatacgggaaatcaaggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="90514" stop="93890"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90814" g_stop="91019" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="206" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91020" i_stop="91107" i_length="88">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91108" g_stop="91235" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="334" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91236" i_stop="91315" i_length="80">
            <donor d_prob="0.885" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91316" g_stop="91409" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="428" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91410" i_stop="93472" i_length="2063">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.431" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="93473" g_stop="93590" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="546" r_length="118" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E256214" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E256214" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90814" e_stop="91019"/>
          <exon e_start="91108" e_stop="91235"/>
          <exon e_start="91316" e_stop="91409"/>
          <exon e_start="93473" e_stop="93590"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCACTCCTCTAGGGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAGGTAATTTGTCTTTTGTGCTTGTTTGTGTTAATAATCAATTATGACAGGAAGTGTGTGCAACTAATTAATGTTCTTTTCGATCATGCAGAAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAGGTAATGTTATCAAATTTCTTGGGAGGGTTAGGTTCTTTCTGATATTAATTACTCACACGACCTGATGTTTCTCCCTTCAGGCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAGGTAGATCATTCTTGCCTTTTGTTCCTGACCTGAATAGGTGCTGAATTTTTTTAGTGCATGTTTCAGTCATACAGCTATTCCATTTTACCATGGCAAGAAGTTTCTTAGATTCTGGGACAAAATGCAGGGACTTCTGTCCAGTGATTAAATATGCTAACACTGTTAATCTTTGGTATTATTCTAGAGACTCGAGAGCTTTTGAGGATACTTTTTTATGCATCCTATGTTTCAAATGGTATCAGCTTACCTCTTTCAGTTTTTAGAGTTACTGAGTTAGTATCTTTTCTCTTCTTTGATGTAATAAAGAGAGAAATATATTAATGACATGGATCTTAGAGGAAGTTGCTTCGTTTGAACACTTTAAATCTACTTTAACGTTCTAACAGTTTTAATAAATACAAGAAATTGTTAATTAGAATGTGGGAGGATTAAGGAAAAGCGAGAATAGGCTCTGAAGAAGTGACAATTTTCATATTTTTCTTGACGAGCGGAGGAAGTGGGAGCACATGTAAACAGAAGACTGTGTTTAGTTCTTGGTTTTTGATTGCAGACCATGGAGTAGATCAAACCTGAGAACTGTTGCACTTTTTAGGATTACTGGATCTTGTTTCACTGATTACTTTGTCTGATAATGCAGATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAAGTAAATACAGAACCAAACAAAATCACCTATAATATGATTTTAGTGTTGAATTTGAAGTAGCTGAGGATGTTAATCAGGTCTTAAATCATAGGTCTCTTTCAGGTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGTATGATTCCGTCCTGCCATATTTTAGTCCAGAACCGCGTCTCTTCTGTCACCAGATATCGGGACCTGGTTTCGAGATGTTAATCCTTACATTGCTGAAAATGGGATTGAAACTTCTGTTGAACATGAAGTTGGTCTCACGTATATTTTTAGAAACATGGAACATAATTTCGTTGTTCCTGCCATAAATAATTTGAGAAAAGACGACTGCTTGTTCCCAAATCCTGCAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGA</genome_strand>
        <mrna_strand>TGCACTCCTCTAGGGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAG........................................................................................AAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAG................................................................................GCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E257691" ref_strand="+" ref_description="SGN-E257691 [cLEG-39-I12]">
      <seq>tgcactcctctagggtggatggggactcacataaatggattgatgcttgaaatcgaggtaaaacagataagtcttacaaggaagaagaagtcatacaactcttccattttaccatggcaagaagttctttgccacgagtgagtcttcaagaaaggcagaaggaaataataatattaagacagttcatgatgtgttactcatgccagaaactagaactgtaaggagactgcatcattctacagaagctatctggctggagcttccacgacagtcatgagtcatcccatcaatgtgattaatcttcaacccatgacagtgtattttctgatggaaggccaagtgtgaaaatggaacctgtcaacatctgaaataacaattacaagctcaaggggagtgctcaagtacgcacaatggggagtcaaaagaagggtggatggaactcgggtaaatggattgatacgggaaatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="90514" stop="93813"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90814" g_stop="91019" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="206" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91020" i_stop="91107" i_length="88">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91108" g_stop="91235" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="334" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91236" i_stop="91315" i_length="80">
            <donor d_prob="0.885" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91316" g_stop="91409" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="428" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91410" i_stop="93472" i_length="2063">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.431" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="93473" g_stop="93513" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="469" r_length="41" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E257691" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E257691" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90814" e_stop="91019"/>
          <exon e_start="91108" e_stop="91235"/>
          <exon e_start="91316" e_stop="91409"/>
          <exon e_start="93473" e_stop="93513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCACTCCTCTAGGGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAGGTAATTTGTCTTTTGTGCTTGTTTGTGTTAATAATCAATTATGACAGGAAGTGTGTGCAACTAATTAATGTTCTTTTCGATCATGCAGAAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAGGTAATGTTATCAAATTTCTTGGGAGGGTTAGGTTCTTTCTGATATTAATTACTCACACGACCTGATGTTTCTCCCTTCAGGCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAGGTAGATCATTCTTGCCTTTTGTTCCTGACCTGAATAGGTGCTGAATTTTTTTAGTGCATGTTTCAGTCATACAGCTATTCCATTTTACCATGGCAAGAAGTTTCTTAGATTCTGGGACAAAATGCAGGGACTTCTGTCCAGTGATTAAATATGCTAACACTGTTAATCTTTGGTATTATTCTAGAGACTCGAGAGCTTTTGAGGATACTTTTTTATGCATCCTATGTTTCAAATGGTATCAGCTTACCTCTTTCAGTTTTTAGAGTTACTGAGTTAGTATCTTTTCTCTTCTTTGATGTAATAAAGAGAGAAATATATTAATGACATGGATCTTAGAGGAAGTTGCTTCGTTTGAACACTTTAAATCTACTTTAACGTTCTAACAGTTTTAATAAATACAAGAAATTGTTAATTAGAATGTGGGAGGATTAAGGAAAAGCGAGAATAGGCTCTGAAGAAGTGACAATTTTCATATTTTTCTTGACGAGCGGAGGAAGTGGGAGCACATGTAAACAGAAGACTGTGTTTAGTTCTTGGTTTTTGATTGCAGACCATGGAGTAGATCAAACCTGAGAACTGTTGCACTTTTTAGGATTACTGGATCTTGTTTCACTGATTACTTTGTCTGATAATGCAGATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAAGTAAATACAGAACCAAACAAAATCACCTATAATATGATTTTAGTGTTGAATTTGAAGTAGCTGAGGATGTTAATCAGGTCTTAAATCATAGGTCTCTTTCAGGTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGTATGATTCCGTCCTGCCATATTTTAGTCCAGAACCGCGTCTCTTCTGTCACCAGATATCGGGACCTGGTTTCGAGATGTTAATCCTTACATTGCTGAAAATGGGATTGAAACTTCTGTTGAACATGAAGTTGGTCTCACGTATATTTTTAGAAACATGGAACATAATTTCGTTGTTCCTGCCATAAATAATTTGAGAAAAGACGACTGCTTGTTCCCAAATCCTGCAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCA</genome_strand>
        <mrna_strand>TGCACTCCTCTAGGGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAG........................................................................................AAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAG................................................................................GCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E258009" ref_strand="+" ref_description="SGN-E258009 [cLEG-48-H2]">
      <seq>tgcactcctctagggtggatggggactcacataaatggattgatgcttgaaatcgaggtaaaacagataagtcttacaaggaagaagaagtcatacaactcttccattttaccatggcaagaagttctttgccacgagtgagtcttcaagaaaggcagaaggaaataataatattaagacagttcatgatgtgttactcatgccagaaactagaactgtaaggagactgcatcattctacagaagctatctggctggagcttccacgacagtcatgagtcatcccatcaatgtgattaatcttcaacccatgacagtgtattttctgatggaaggccaagtgtgaaaatggaacctgtcaacatctgaaataacaattacaagctcaaggggagtgctcaagtacgcacaatggggagtcaaaagaagggtggatggaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="90514" stop="91715"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90814" g_stop="91019" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="206" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91020" i_stop="91107" i_length="88">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91108" g_stop="91235" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="334" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91236" i_stop="91315" i_length="80">
            <donor d_prob="0.885" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91316" g_stop="91409" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="428" r_length="94" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E258009" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>428</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E258009" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90814" e_stop="91019"/>
          <exon e_start="91108" e_stop="91235"/>
          <exon e_start="91316" e_stop="91409"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCACTCCTCTAGGGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAGGTAATTTGTCTTTTGTGCTTGTTTGTGTTAATAATCAATTATGACAGGAAGTGTGTGCAACTAATTAATGTTCTTTTCGATCATGCAGAAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAGGTAATGTTATCAAATTTCTTGGGAGGGTTAGGTTCTTTCTGATATTAATTACTCACACGACCTGATGTTTCTCCCTTCAGGCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAG</genome_strand>
        <mrna_strand>TGCACTCCTCTAGGGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAG........................................................................................AAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAG................................................................................GCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E242325" ref_strand="+" ref_description="SGN-E242325 [cLEE-3-M22]">
      <seq>ttcaagaaaggcagaaggaaataataatattaagacagttcatgatgtgttactcatgccagaaactagaactgtaaggagactgcatcattctacagaagctatctggctggagcttccacgacagtcatgagtcatcccatcaatgtgattaatcttcaacccatgacagtgtattttctgatggaaggccaagtgtgaaaatggaacctgtcaacatctgaaataacaattacaagctcaaggggagtgctcaagtacgcacaatggggagtcaaaagaagggtggatggaactcgggtaaatggattgatacgggaaatcaaggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatggagaagttttttgccacaaatgagtcttcaagaaaagcagcagtaaataacatatattgtgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="90658" stop="93952"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90958" g_stop="91019" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91020" i_stop="91107" i_length="88">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91108" g_stop="91235" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="190" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91236" i_stop="91315" i_length="80">
            <donor d_prob="0.885" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91316" g_stop="91409" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="284" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91410" i_stop="93472" i_length="2063">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.431" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="93473" g_stop="93652" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="464" r_length="180" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E242325" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E242325" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90958" e_stop="91019"/>
          <exon e_start="91108" e_stop="91235"/>
          <exon e_start="91316" e_stop="91409"/>
          <exon e_start="93473" e_stop="93652"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAGGTAATTTGTCTTTTGTGCTTGTTTGTGTTAATAATCAATTATGACAGGAAGTGTGTGCAACTAATTAATGTTCTTTTCGATCATGCAGAAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAGGTAATGTTATCAAATTTCTTGGGAGGGTTAGGTTCTTTCTGATATTAATTACTCACACGACCTGATGTTTCTCCCTTCAGGCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAGGTAGATCATTCTTGCCTTTTGTTCCTGACCTGAATAGGTGCTGAATTTTTTTAGTGCATGTTTCAGTCATACAGCTATTCCATTTTACCATGGCAAGAAGTTTCTTAGATTCTGGGACAAAATGCAGGGACTTCTGTCCAGTGATTAAATATGCTAACACTGTTAATCTTTGGTATTATTCTAGAGACTCGAGAGCTTTTGAGGATACTTTTTTATGCATCCTATGTTTCAAATGGTATCAGCTTACCTCTTTCAGTTTTTAGAGTTACTGAGTTAGTATCTTTTCTCTTCTTTGATGTAATAAAGAGAGAAATATATTAATGACATGGATCTTAGAGGAAGTTGCTTCGTTTGAACACTTTAAATCTACTTTAACGTTCTAACAGTTTTAATAAATACAAGAAATTGTTAATTAGAATGTGGGAGGATTAAGGAAAAGCGAGAATAGGCTCTGAAGAAGTGACAATTTTCATATTTTTCTTGACGAGCGGAGGAAGTGGGAGCACATGTAAACAGAAGACTGTGTTTAGTTCTTGGTTTTTGATTGCAGACCATGGAGTAGATCAAACCTGAGAACTGTTGCACTTTTTAGGATTACTGGATCTTGTTTCACTGATTACTTTGTCTGATAATGCAGATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAAGTAAATACAGAACCAAACAAAATCACCTATAATATGATTTTAGTGTTGAATTTGAAGTAGCTGAGGATGTTAATCAGGTCTTAAATCATAGGTCTCTTTCAGGTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGTATGATTCCGTCCTGCCATATTTTAGTCCAGAACCGCGTCTCTTCTGTCACCAGATATCGGGACCTGGTTTCGAGATGTTAATCCTTACATTGCTGAAAATGGGATTGAAACTTCTGTTGAACATGAAGTTGGTCTCACGTATATTTTTAGAAACATGGAACATAATTTCGTTGTTCCTGCCATAAATAATTTGAGAAAAGACGACTGCTTGTTCCCAAATCCTGCAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACT</genome_strand>
        <mrna_strand>TTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAG........................................................................................AAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAG................................................................................GCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E266998" ref_strand="+" ref_description="SGN-E266998 [cLEI-7-L4]">
      <seq>tcatgccagaaactagaactgtaaggagactgcatcattctacagaagctatctggctggagcttccacgacagtcatgagtcatcccatcaatgtgattaatcttcaacccatgacagtgtattttctgatggaaggccaagtgtgaaaatggaacctgtcaacatctgaaataacaattacaagctcaaggggagtgctcaagtacgcacaatggggagtcaaaagaagggtggatggaactcgggtaaatggattgatacgggaaatcaaggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatggagaagttttttgccacaaatgagtcttcaagaaaagcagcagtaaataacatatattgtgactgttcgtgatgtgccacttatgccagaaactacagcgataaggagagtgcagcattctgcagaagctatctgctcggagcttccacatctatgtaatcaatcttcacccaagttgtggtgactgtgtattctctgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="90800" stop="94178"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91011" g_stop="91019" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="9" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91020" i_stop="91107" i_length="88">
            <donor d_prob="0.949" d_score="0.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91108" g_stop="91235" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="137" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91236" i_stop="91315" i_length="80">
            <donor d_prob="0.885" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91316" g_stop="91409" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="231" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91410" i_stop="93472" i_length="2063">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.431" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="93473" g_stop="93677" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="436" r_length="205" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="93678" i_stop="93766" i_length="89">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="93767" g_stop="93878" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="548" r_length="112" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E266998" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>548</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E266998" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91011" e_stop="91019"/>
          <exon e_start="91108" e_stop="91235"/>
          <exon e_start="91316" e_stop="91409"/>
          <exon e_start="93473" e_stop="93677"/>
          <exon e_start="93767" e_stop="93878"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATGCCAGGTAATTTGTCTTTTGTGCTTGTTTGTGTTAATAATCAATTATGACAGGAAGTGTGTGCAACTAATTAATGTTCTTTTCGATCATGCAGAAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAGGTAATGTTATCAAATTTCTTGGGAGGGTTAGGTTCTTTCTGATATTAATTACTCACACGACCTGATGTTTCTCCCTTCAGGCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAGGTAGATCATTCTTGCCTTTTGTTCCTGACCTGAATAGGTGCTGAATTTTTTTAGTGCATGTTTCAGTCATACAGCTATTCCATTTTACCATGGCAAGAAGTTTCTTAGATTCTGGGACAAAATGCAGGGACTTCTGTCCAGTGATTAAATATGCTAACACTGTTAATCTTTGGTATTATTCTAGAGACTCGAGAGCTTTTGAGGATACTTTTTTATGCATCCTATGTTTCAAATGGTATCAGCTTACCTCTTTCAGTTTTTAGAGTTACTGAGTTAGTATCTTTTCTCTTCTTTGATGTAATAAAGAGAGAAATATATTAATGACATGGATCTTAGAGGAAGTTGCTTCGTTTGAACACTTTAAATCTACTTTAACGTTCTAACAGTTTTAATAAATACAAGAAATTGTTAATTAGAATGTGGGAGGATTAAGGAAAAGCGAGAATAGGCTCTGAAGAAGTGACAATTTTCATATTTTTCTTGACGAGCGGAGGAAGTGGGAGCACATGTAAACAGAAGACTGTGTTTAGTTCTTGGTTTTTGATTGCAGACCATGGAGTAGATCAAACCTGAGAACTGTTGCACTTTTTAGGATTACTGGATCTTGTTTCACTGATTACTTTGTCTGATAATGCAGATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAAGTAAATACAGAACCAAACAAAATCACCTATAATATGATTTTAGTGTTGAATTTGAAGTAGCTGAGGATGTTAATCAGGTCTTAAATCATAGGTCTCTTTCAGGTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGTATGATTCCGTCCTGCCATATTTTAGTCCAGAACCGCGTCTCTTCTGTCACCAGATATCGGGACCTGGTTTCGAGATGTTAATCCTTACATTGCTGAAAATGGGATTGAAACTTCTGTTGAACATGAAGTTGGTCTCACGTATATTTTTAGAAACATGGAACATAATTTCGTTGTTCCTGCCATAAATAATTTGAGAAAAGACGACTGCTTGTTCCCAAATCCTGCAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGAAAGAAAATCTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCAAGTTGTGGTGACTGTGTATTCTCTGATG</genome_strand>
        <mrna_strand>TCATGCCAG........................................................................................AAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAG................................................................................GCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCAAGTTGTGGTGACTGTGTATTCTCTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E549008" ref_strand="+" ref_description="SGN-E549008 [TUS-66-H7](-)">
      <seq>cagtcatgagtcatcccatcaatgtgataatcttcaccccatgacagtgtttttctgatgaaaggccaagtgtgaaaatggaacctgtcaacatctgaaataacaattacaagctcaaggggagtgctcaagtacgcacaatggggagtcaaaagaagggtggatggaactcgggtaaatggattgatacgggaaatcaaggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatggagaagttttttgccacaaatgagtcttcaagaaaagcagcagtaaataacatatattgtgactgttcgtgatgtgccacttatgccagaaactacagcgataaggagagtgcagcattctgcagaagctatctgctcggagcttccacatctatgtaatcaatcttcacccaagttgtggtgactgtgtattctctgatgaaaggccaagtatgaaaatgaaactagctaacatctggaataacaaattacaagctcaaaggggagtgtacaagtacactcaatggggattcaaaagaaggttctgtgtagctggggtgttggggcatctccaatccaaacacctaattttacaccaaatttggtgttaaccaaatttactgtaatcaactcccaacctactgcatcgaaaaataatttatntttctctccattattattattattattttttatttcatttatatttttttatttcataaaacattttctttctatggttctccttttataatcgtttaatataaaattattttgtatcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="90870" stop="95749"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91170" g_stop="91235" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="64" r_length="64" r_score="0.939"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91236" i_stop="91315" i_length="80">
            <donor d_prob="0.885" d_score="0.92"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91316" g_stop="91409" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="158" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91410" i_stop="93472" i_length="2063">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.431" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="93473" g_stop="93677" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="159" r_stop="363" r_length="205" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="93678" i_stop="93766" i_length="89">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="93767" g_stop="93882" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="479" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="93883" i_stop="93985" i_length="103">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="93986" g_stop="94081" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="480" r_stop="575" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="94082" i_stop="95208" i_length="1127">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="95209" g_stop="95456" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="576" r_stop="826" r_length="251" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E549008" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>825</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E549008" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91170" e_stop="91235"/>
          <exon e_start="91316" e_stop="91409"/>
          <exon e_start="93473" e_stop="93677"/>
          <exon e_start="93767" e_stop="93882"/>
          <exon e_start="93986" e_stop="94081"/>
          <exon e_start="95209" e_stop="95456"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAGGTAATGTTATCAAATTTCTTGGGAGGGTTAGGTTCTTTCTGATATTAATTACTCACACGACCTGATGTTTCTCCCTTCAGGCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAGGTAGATCATTCTTGCCTTTTGTTCCTGACCTGAATAGGTGCTGAATTTTTTTAGTGCATGTTTCAGTCATACAGCTATTCCATTTTACCATGGCAAGAAGTTTCTTAGATTCTGGGACAAAATGCAGGGACTTCTGTCCAGTGATTAAATATGCTAACACTGTTAATCTTTGGTATTATTCTAGAGACTCGAGAGCTTTTGAGGATACTTTTTTATGCATCCTATGTTTCAAATGGTATCAGCTTACCTCTTTCAGTTTTTAGAGTTACTGAGTTAGTATCTTTTCTCTTCTTTGATGTAATAAAGAGAGAAATATATTAATGACATGGATCTTAGAGGAAGTTGCTTCGTTTGAACACTTTAAATCTACTTTAACGTTCTAACAGTTTTAATAAATACAAGAAATTGTTAATTAGAATGTGGGAGGATTAAGGAAAAGCGAGAATAGGCTCTGAAGAAGTGACAATTTTCATATTTTTCTTGACGAGCGGAGGAAGTGGGAGCACATGTAAACAGAAGACTGTGTTTAGTTCTTGGTTTTTGATTGCAGACCATGGAGTAGATCAAACCTGAGAACTGTTGCACTTTTTAGGATTACTGGATCTTGTTTCACTGATTACTTTGTCTGATAATGCAGATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAAGTAAATACAGAACCAAACAAAATCACCTATAATATGATTTTAGTGTTGAATTTGAAGTAGCTGAGGATGTTAATCAGGTCTTAAATCATAGGTCTCTTTCAGGTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGTATGATTCCGTCCTGCCATATTTTAGTCCAGAACCGCGTCTCTTCTGTCACCAGATATCGGGACCTGGTTTCGAGATGTTAATCCTTACATTGCTGAAAATGGGATTGAAACTTCTGTTGAACATGAAGTTGGTCTCACGTATATTTTTAGAAACATGGAACATAATTTCGTTGTTCCTGCCATAAATAATTTGAGAAAAGACGACTGCTTGTTCCCAAATCCTGCAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGAAAGAAAATCTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCAAGTTGTGGTGACTGTGTATTCTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGCAACTCACATAACCTGATGTCTCTTTCTTCAGGCCAAGTATGAAAATGAAACTAGCTAACATCTGGAATAACAAATTACAAGCTCAAAGGGGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACGATTCTCGCCATTTCCTGACCTGAATAACAGCTGAATTTTTCTAGTGCATGTTTTTCAGTTAATTAGCTTCATTTCTTCTTCTTTTTTGGGTAATAACTGTGAACTACTACCATTACTCCAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTATGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTCCAGGAAAAAAAACCATAAGCTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTGCTTTCTAGTTAATCTTCTCAGCAGATTCTGACACCACGCGGTTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATGGATCATTGCCCCTCATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTAAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATAGGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTGAGGAAATATCTGTGTTGGAACTTCATTTGATTGTTTGTTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATCTTTTCATTCGTTTAGGAATAATTTGGACCTGGAGCACAGTGCAAATAAATGCATGGAGCAACTCTCTATCTCTCTTCCACACACACACATGAAAAATAGTAAAACGGAACATATTGTATAGATTGAGGGTTTAAAGCCTTTCAAGTGTCGTTTGATCATTTTATGTTCTAATAGGGTTAATTAAGACAAGTGAATTACGAGTTGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTTCAATTTAATTTGGAAAACTATTCACGACATCATTCATGTTTTAGGAAATACTTCACTATCTAACAATATTCCCTTGCACGTGTTTTGTAAGAAAATGATTGGTTCTTTTTTTCTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTGGGGCATCTCCAATCCAAACACCTAATTTTACACCAAATTTGGTGTTAACCAAATTTACTGTAATCAACT-CCAACCTACTGCATCGAAAAATAATTTAT-TTTCTCT-CATTATTATTATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAACATTTTCTTTCTATGGTTCTCCTTTTATAATCGTTTAATATAAAATTATTTTGTATCATAATTTTTTA</genome_strand>
        <mrna_strand>CAGTCATGAGTCATCCCATCAATGTGA-TAATCTTCACCCCATGACAGTGT-TTTTCTGATGAAAG................................................................................GCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCAAGTTGTGGTGACTGTGTATTCTCTGATGAAAG.......................................................................................................GCCAAGTATGAAAATGAAACTAGCTAACATCTGGAATAACAAATTACAAGCTCAAAGGGGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGTGTAGCTGGGGTGTTGGGGCATCTCCAATCCAAACACCTAATTTTACACCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCCAACCTACTGCATCGAAAAATAATTTATNTTTCTCTCCATTATTATTATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAACATTTTCTTTCTATGGTTCTCCTTTTATAATCGTTTAATATAAAATTATTTTGTATCAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E538633" ref_strand="+" ref_description="SGN-E538633 [TUS-57-P17](-)">
      <seq>atgtgattaatcttcaacccatgccagtgtttttctgatggaaggccaagtgtgaaaatggaacctgtcaacatctgaaataacaattacaagctcaaggggagtgctcaagtacgcacaatggggagtcaaaagaagggtggatggaactcgggtaaatggattgatacgggaaatcaaggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatggagaagttttttgccacaaatgagtcttcaagaaaagcagcagtaaataacatatattgtgactgttcgtgatgtgccacttatgccagaaactacagcgataaggagagtgcagcattctgcagaagctatctgctcggagcttccacatctatgtaatcaatcttcacccaagttgtggtgactgtgtattctctgatgaaaggccaagtatgaaaatgaaactagctaacatctggaataacaaattacaagctcaaaggggagtgtacaagtacactcaatggggattcaaaagaaggttctgtgtagctggggtgttggggcatctccaatccaaacacctaattttacaccaaatttggtgttaaccaaatttactgtaatcaactccaacctactgcatcgaaaaataatttattttctctcattattattattattattttttatttcatttattttttttatttcataaaactttctctcttttttgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="90891" stop="95703"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91191" g_stop="91235" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="44" r_length="44" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91236" i_stop="91315" i_length="80">
            <donor d_prob="0.885" d_score="0.96"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91316" g_stop="91409" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="138" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91410" i_stop="93472" i_length="2063">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.431" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="93473" g_stop="93677" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="343" r_length="205" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="93678" i_stop="93766" i_length="89">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="93767" g_stop="93882" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="459" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="93883" i_stop="93985" i_length="103">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="93986" g_stop="94081" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="460" r_stop="555" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="94082" i_stop="95208" i_length="1127">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="95209" g_stop="95407" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="556" r_stop="753" r_length="198" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E538633" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>755</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E538633" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91191" e_stop="91235"/>
          <exon e_start="91316" e_stop="91409"/>
          <exon e_start="93473" e_stop="93677"/>
          <exon e_start="93767" e_stop="93882"/>
          <exon e_start="93986" e_stop="94081"/>
          <exon e_start="95209" e_stop="95407"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAGGTAATGTTATCAAATTTCTTGGGAGGGTTAGGTTCTTTCTGATATTAATTACTCACACGACCTGATGTTTCTCCCTTCAGGCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAGGTAGATCATTCTTGCCTTTTGTTCCTGACCTGAATAGGTGCTGAATTTTTTTAGTGCATGTTTCAGTCATACAGCTATTCCATTTTACCATGGCAAGAAGTTTCTTAGATTCTGGGACAAAATGCAGGGACTTCTGTCCAGTGATTAAATATGCTAACACTGTTAATCTTTGGTATTATTCTAGAGACTCGAGAGCTTTTGAGGATACTTTTTTATGCATCCTATGTTTCAAATGGTATCAGCTTACCTCTTTCAGTTTTTAGAGTTACTGAGTTAGTATCTTTTCTCTTCTTTGATGTAATAAAGAGAGAAATATATTAATGACATGGATCTTAGAGGAAGTTGCTTCGTTTGAACACTTTAAATCTACTTTAACGTTCTAACAGTTTTAATAAATACAAGAAATTGTTAATTAGAATGTGGGAGGATTAAGGAAAAGCGAGAATAGGCTCTGAAGAAGTGACAATTTTCATATTTTTCTTGACGAGCGGAGGAAGTGGGAGCACATGTAAACAGAAGACTGTGTTTAGTTCTTGGTTTTTGATTGCAGACCATGGAGTAGATCAAACCTGAGAACTGTTGCACTTTTTAGGATTACTGGATCTTGTTTCACTGATTACTTTGTCTGATAATGCAGATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAAGTAAATACAGAACCAAACAAAATCACCTATAATATGATTTTAGTGTTGAATTTGAAGTAGCTGAGGATGTTAATCAGGTCTTAAATCATAGGTCTCTTTCAGGTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGTATGATTCCGTCCTGCCATATTTTAGTCCAGAACCGCGTCTCTTCTGTCACCAGATATCGGGACCTGGTTTCGAGATGTTAATCCTTACATTGCTGAAAATGGGATTGAAACTTCTGTTGAACATGAAGTTGGTCTCACGTATATTTTTAGAAACATGGAACATAATTTCGTTGTTCCTGCCATAAATAATTTGAGAAAAGACGACTGCTTGTTCCCAAATCCTGCAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGAAAGAAAATCTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCAAGTTGTGGTGACTGTGTATTCTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGCAACTCACATAACCTGATGTCTCTTTCTTCAGGCCAAGTATGAAAATGAAACTAGCTAACATCTGGAATAACAAATTACAAGCTCAAAGGGGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACGATTCTCGCCATTTCCTGACCTGAATAACAGCTGAATTTTTCTAGTGCATGTTTTTCAGTTAATTAGCTTCATTTCTTCTTCTTTTTTGGGTAATAACTGTGAACTACTACCATTACTCCAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTATGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTCCAGGAAAAAAAACCATAAGCTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTGCTTTCTAGTTAATCTTCTCAGCAGATTCTGACACCACGCGGTTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATGGATCATTGCCCCTCATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTAAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATAGGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTGAGGAAATATCTGTGTTGGAACTTCATTTGATTGTTTGTTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATCTTTTCATTCGTTTAGGAATAATTTGGACCTGGAGCACAGTGCAAATAAATGCATGGAGCAACTCTCTATCTCTCTTCCACACACACACATGAAAAATAGTAAAACGGAACATATTGTATAGATTGAGGGTTTAAAGCCTTTCAAGTGTCGTTTGATCATTTTATGTTCTAATAGGGTTAATTAAGACAAGTGAATTACGAGTTGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTTCAATTTAATTTGGAAAACTATTCACGACATCATTCATGTTTTAGGAAATACTTCACTATCTAACAATATTCCCTTGCACGTGTTTTGTAAGAAAATGATTGGTTCTTTTTTTCTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTGGGGCATCTCCAATCCAAACACCTAATTTTACACCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAACCTACTGCATCGAAAAATAATTTATTTTCTCTCATTATTATTATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAACATTTTCTTTCTATGGTTC</genome_strand>
        <mrna_strand>ATGTGATTAATCTTCAACCCATGCCAGTGT-TTTTCTGATGGAAG................................................................................GCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCAAGTTGTGGTGACTGTGTATTCTCTGATGAAAG.......................................................................................................GCCAAGTATGAAAATGAAACTAGCTAACATCTGGAATAACAAATTACAAGCTCAAAGGGGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGTGTAGCTGGGGTGTTGGGGCATCTCCAATCCAAACACCTAATTTTACACCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAACCTACTGCATCGAAAAATAATTTATTTTCTCTCATTATTATTATTATTATTTTTTATTTCATTTAT-TTTTTTTATTTCATAAAACTTTCTCTCTTTTTTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E254591" ref_strand="+" ref_description="SGN-E254591 [cLEG-29-J14]">
      <seq>tctgatggaaggccaagtgtgaaaatggaacctgtcaacatctgaaataacaattacaagctcaaggggagtgctcaagtacgcacaatggggagtcaaaagaagggtggatggaactcgggtaaatggattgatacgggaaatcaaggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatggagaagttttttgccacaaatgagtcttcaagaaaagcagcagtaaataacatatattgtgactgttcgtgatgtgccacttatgccagaaactacagcgataaggagagtgcagcattctgcagaagctatctgctcggagcttccacatctatgtaatcaatcttcacccaagttgtggtgactgtgtattctctgatgaaaggccaagtatgaaaatgaaactagctaacatctggaataacaaattacaagctcaaaggggagtgtacaagtacactcaatggggattcaaaagaaggttctgtgtaactggggtgttggggcatctccaatccaaacacctaattttacaccaaatttggtgttaaccaaatttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="91014" stop="95589"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91225" g_stop="91235" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="11" r_length="11" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91236" i_stop="91315" i_length="80">
            <donor d_prob="0.885" d_score="0.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91316" g_stop="91409" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="105" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91410" i_stop="93472" i_length="2063">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.431" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="93473" g_stop="93677" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="310" r_length="205" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="93678" i_stop="93766" i_length="89">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="93767" g_stop="93882" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="426" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="93883" i_stop="93985" i_length="103">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="93986" g_stop="94081" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="522" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="94082" i_stop="95208" i_length="1127">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="95209" g_stop="95289" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="603" r_length="81" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E254591" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>603</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E254591" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91225" e_stop="91235"/>
          <exon e_start="91316" e_stop="91409"/>
          <exon e_start="93473" e_stop="93677"/>
          <exon e_start="93767" e_stop="93882"/>
          <exon e_start="93986" e_stop="94081"/>
          <exon e_start="95209" e_stop="95289"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGATGGAAGGTAATGTTATCAAATTTCTTGGGAGGGTTAGGTTCTTTCTGATATTAATTACTCACACGACCTGATGTTTCTCCCTTCAGGCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAGGTAGATCATTCTTGCCTTTTGTTCCTGACCTGAATAGGTGCTGAATTTTTTTAGTGCATGTTTCAGTCATACAGCTATTCCATTTTACCATGGCAAGAAGTTTCTTAGATTCTGGGACAAAATGCAGGGACTTCTGTCCAGTGATTAAATATGCTAACACTGTTAATCTTTGGTATTATTCTAGAGACTCGAGAGCTTTTGAGGATACTTTTTTATGCATCCTATGTTTCAAATGGTATCAGCTTACCTCTTTCAGTTTTTAGAGTTACTGAGTTAGTATCTTTTCTCTTCTTTGATGTAATAAAGAGAGAAATATATTAATGACATGGATCTTAGAGGAAGTTGCTTCGTTTGAACACTTTAAATCTACTTTAACGTTCTAACAGTTTTAATAAATACAAGAAATTGTTAATTAGAATGTGGGAGGATTAAGGAAAAGCGAGAATAGGCTCTGAAGAAGTGACAATTTTCATATTTTTCTTGACGAGCGGAGGAAGTGGGAGCACATGTAAACAGAAGACTGTGTTTAGTTCTTGGTTTTTGATTGCAGACCATGGAGTAGATCAAACCTGAGAACTGTTGCACTTTTTAGGATTACTGGATCTTGTTTCACTGATTACTTTGTCTGATAATGCAGATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAAGTAAATACAGAACCAAACAAAATCACCTATAATATGATTTTAGTGTTGAATTTGAAGTAGCTGAGGATGTTAATCAGGTCTTAAATCATAGGTCTCTTTCAGGTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGTATGATTCCGTCCTGCCATATTTTAGTCCAGAACCGCGTCTCTTCTGTCACCAGATATCGGGACCTGGTTTCGAGATGTTAATCCTTACATTGCTGAAAATGGGATTGAAACTTCTGTTGAACATGAAGTTGGTCTCACGTATATTTTTAGAAACATGGAACATAATTTCGTTGTTCCTGCCATAAATAATTTGAGAAAAGACGACTGCTTGTTCCCAAATCCTGCAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGAAAGAAAATCTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCAAGTTGTGGTGACTGTGTATTCTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGCAACTCACATAACCTGATGTCTCTTTCTTCAGGCCAAGTATGAAAATGAAACTAGCTAACATCTGGAATAACAAATTACAAGCTCAAAGGGGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACGATTCTCGCCATTTCCTGACCTGAATAACAGCTGAATTTTTCTAGTGCATGTTTTTCAGTTAATTAGCTTCATTTCTTCTTCTTTTTTGGGTAATAACTGTGAACTACTACCATTACTCCAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTATGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTCCAGGAAAAAAAACCATAAGCTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTGCTTTCTAGTTAATCTTCTCAGCAGATTCTGACACCACGCGGTTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATGGATCATTGCCCCTCATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTAAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATAGGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTGAGGAAATATCTGTGTTGGAACTTCATTTGATTGTTTGTTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATCTTTTCATTCGTTTAGGAATAATTTGGACCTGGAGCACAGTGCAAATAAATGCATGGAGCAACTCTCTATCTCTCTTCCACACACACACATGAAAAATAGTAAAACGGAACATATTGTATAGATTGAGGGTTTAAAGCCTTTCAAGTGTCGTTTGATCATTTTATGTTCTAATAGGGTTAATTAAGACAAGTGAATTACGAGTTGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTTCAATTTAATTTGGAAAACTATTCACGACATCATTCATGTTTTAGGAAATACTTCACTATCTAACAATATTCCCTTGCACGTGTTTTGTAAGAAAATGATTGGTTCTTTTTTTCTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTGGGGCATCTCCAATCCAAACACCTAATTTTACACCAAATTTGGTGTTAACCAAATTTACT</genome_strand>
        <mrna_strand>TCTGATGGAAG................................................................................GCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCAAGTTGTGGTGACTGTGTATTCTCTGATGAAAG.......................................................................................................GCCAAGTATGAAAATGAAACTAGCTAACATCTGGAATAACAAATTACAAGCTCAAAGGGGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGTGTAACTGGGGTGTTGGGGCATCTCCAATCCAAACACCTAATTTTACACCAAATTTGGTGTTAACCAAATTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E262579" ref_strand="+" ref_description="SGN-E262579 [cLEG-63-M6]">
      <seq>tctgatggaaggccaagtgtgaaaatggaacctgtcaacatctgaaataacaattacaagctcaaggggagtgctcaagtacgcacaatggggagtcaaaagaagggtggatggaactcgggtaaatggattgatacgggaaatcaaggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatggagaagttttttgccacaaatgagtcttcaagaaaagcagcagtaaataacatatattgtgactgttcgtgatgtgccacttatgccagaaactacagcgataaggagagtgcagcattctgcagaagctatctgctcggagcttccacatctatgtaatcaatcttcacccaagttgtggtgactgtgtattctctgatgaaaggccaagtatgaaaatgaaactagctaacatctggaataacaaatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="91014" stop="94331"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91225" g_stop="91235" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="11" r_length="11" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91236" i_stop="91315" i_length="80">
            <donor d_prob="0.885" d_score="0.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91316" g_stop="91409" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="105" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91410" i_stop="93472" i_length="2063">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.431" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="93473" g_stop="93677" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="310" r_length="205" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="93678" i_stop="93766" i_length="89">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="93767" g_stop="93882" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="426" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="93883" i_stop="93985" i_length="103">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="93986" g_stop="94031" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="472" r_length="46" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E262579" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E262579" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91225" e_stop="91235"/>
          <exon e_start="91316" e_stop="91409"/>
          <exon e_start="93473" e_stop="93677"/>
          <exon e_start="93767" e_stop="93882"/>
          <exon e_start="93986" e_stop="94031"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGATGGAAGGTAATGTTATCAAATTTCTTGGGAGGGTTAGGTTCTTTCTGATATTAATTACTCACACGACCTGATGTTTCTCCCTTCAGGCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAGGTAGATCATTCTTGCCTTTTGTTCCTGACCTGAATAGGTGCTGAATTTTTTTAGTGCATGTTTCAGTCATACAGCTATTCCATTTTACCATGGCAAGAAGTTTCTTAGATTCTGGGACAAAATGCAGGGACTTCTGTCCAGTGATTAAATATGCTAACACTGTTAATCTTTGGTATTATTCTAGAGACTCGAGAGCTTTTGAGGATACTTTTTTATGCATCCTATGTTTCAAATGGTATCAGCTTACCTCTTTCAGTTTTTAGAGTTACTGAGTTAGTATCTTTTCTCTTCTTTGATGTAATAAAGAGAGAAATATATTAATGACATGGATCTTAGAGGAAGTTGCTTCGTTTGAACACTTTAAATCTACTTTAACGTTCTAACAGTTTTAATAAATACAAGAAATTGTTAATTAGAATGTGGGAGGATTAAGGAAAAGCGAGAATAGGCTCTGAAGAAGTGACAATTTTCATATTTTTCTTGACGAGCGGAGGAAGTGGGAGCACATGTAAACAGAAGACTGTGTTTAGTTCTTGGTTTTTGATTGCAGACCATGGAGTAGATCAAACCTGAGAACTGTTGCACTTTTTAGGATTACTGGATCTTGTTTCACTGATTACTTTGTCTGATAATGCAGATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAAGTAAATACAGAACCAAACAAAATCACCTATAATATGATTTTAGTGTTGAATTTGAAGTAGCTGAGGATGTTAATCAGGTCTTAAATCATAGGTCTCTTTCAGGTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGTATGATTCCGTCCTGCCATATTTTAGTCCAGAACCGCGTCTCTTCTGTCACCAGATATCGGGACCTGGTTTCGAGATGTTAATCCTTACATTGCTGAAAATGGGATTGAAACTTCTGTTGAACATGAAGTTGGTCTCACGTATATTTTTAGAAACATGGAACATAATTTCGTTGTTCCTGCCATAAATAATTTGAGAAAAGACGACTGCTTGTTCCCAAATCCTGCAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGAAAGAAAATCTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCAAGTTGTGGTGACTGTGTATTCTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGCAACTCACATAACCTGATGTCTCTTTCTTCAGGCCAAGTATGAAAATGAAACTAGCTAACATCTGGAATAACAAATTA</genome_strand>
        <mrna_strand>TCTGATGGAAG................................................................................GCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCAAGTTGTGGTGACTGTGTATTCTCTGATGAAAG.......................................................................................................GCCAAGTATGAAAATGAAACTAGCTAACATCTGGAATAACAAATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E332667" ref_strand="+" ref_description="SGN-E332667 [cTOD-18-J22]">
      <seq>tcaagtacgcacaatggggagtcaaaagaagatattttgctatgaactggattaggaagctatcaatggcatgttatttatttgttagaaatgctgctcatcccagttcaacatttctactttgtgttccatatgtaggttaagagaggagtagtttgaattattatctcaaaaatgaaaataaaaagaagtttgaatgttggtatataccgtccttaagctgacttttctaaatgatgcttcacaatcaagctagaaaaagactaagcaagtgatgtcctaatgaaatggtgcactgaagagtgcactggcaggagtgagattcgatcttcacagattattcggtggggatgtgcttctgaaaagcatgatcctgagtccagattcctctgtcaaatcatacgttcaagtctgtcaattgatttctctcttgctcattgacagttggtgtgaactggaaatccagaaacgctgcgcacacccattcatctaatgtttttcctaaggatggtgatttcctggataataaattcagtgcttcaggtagctagctccagttgtagatcagacttcctgttaatttccagacgggaggaatctttaacaattgtagctggcagatcaacagagaatgtctcatttaaggaatctcttgtacttgataacagttcaaatgtaaagcatgagagaagggaaccatttatgcagagcggttctttgcgcagaagcctcacacatgatgaatcatcttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="91079" stop="93069"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91379" g_stop="91409" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91410" i_stop="92046" i_length="637">
            <donor d_prob="0.966" d_score="0.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92047" g_stop="92769" g_length="723"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="754" r_length="723" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E332667" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>754</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332667" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91379" e_stop="91409"/>
          <exon e_start="92047" e_stop="92769"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGTACGCACAATGGGGAGTCAAAAGAAGGTAGATCATTCTTGCCTTTTGTTCCTGACCTGAATAGGTGCTGAATTTTTTTAGTGCATGTTTCAGTCATACAGCTATTCCATTTTACCATGGCAAGAAGTTTCTTAGATTCTGGGACAAAATGCAGGGACTTCTGTCCAGTGATTAAATATGCTAACACTGTTAATCTTTGGTATTATTCTAGAGACTCGAGAGCTTTTGAGGATACTTTTTTATGCATCCTATGTTTCAAATGGTATCAGCTTACCTCTTTCAGTTTTTAGAGTTACTGAGTTAGTATCTTTTCTCTTCTTTGATGTAATAAAGAGAGAAATATATTAATGACATGGATCTTAGAGGAAGTTGCTTCGTTTGAACACTTTAAATCTACTTTAACGTTCTAACAGTTTTAATAAATACAAGAAATTGTTAATTAGAATGTGGGAGGATTAAGGAAAAGCGAGAATAGGCTCTGAAGAAGTGACAATTTTCATATTTTTCTTGACGAGCGGAGGAAGTGGGAGCACATGTAAACAGAAGACTGTGTTTAGTTCTTGGTTTTTGATTGCAGACCATGGAGTAGATCAAACCTGAGAACTGTTGCACTTTTTAGGATTACTGGATCTTGTTTCACTGATTACTTTGTCTGATAATGCAGATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTG</genome_strand>
        <mrna_strand>TCAAGTACGCACAATGGGGAGTCAAAAGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGGAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E332553" ref_strand="+" ref_description="SGN-E332553 [cTOD-18-K23]">
      <seq>tcaagtacgcacaatggggagtcaaaagaagatattttgctatgaactggattaggaagctatcaatggcatgttatttatttgttagaaatgctgctcatcccagttcaacatttctactttgtgttccatatgtaggttaagagaggagtagtttgaattattatctcaaaaatgaaaataaaaagaagtttgaatgttggtatataccgtccttaagctgacttttctaaatgatgcttcacaatcaagctagaaaaagactaagcaagtgatgtcctaatgaaatggtgcactgaagagtgcactggcaggagtgagattcgatcttcacagattattcggtggggatgtgcttctgaaaagcatgatcctgagtccagattcctctgtcaaatcatacgttcaagtctgtcaattgatttctctcttgctcattgacagttggtgtgaactggaaatccagaaacgctgcgcacacccattcatctaatgtttttcctaaggatggtgatttcctggataataaattcagtgcttcaggtagctagctccagttgtagatcagacttcctgttaatttccagacgggaggaatctttaacaattgtagctggcagatcaacagagaatgtctcatttaaggaatctcttgtacttgataacagttcaaatgtaaagcatgagagaaggaaccatttatgcagagcggttctttgcgcagaagctcacacatgatgaatcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="91079" stop="93063"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91379" g_stop="91409" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91410" i_stop="92046" i_length="637">
            <donor d_prob="0.966" d_score="0.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92047" g_stop="92763" g_length="717"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="746" r_length="715" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E332553" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>748</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332553" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91379" e_stop="91409"/>
          <exon e_start="92047" e_stop="92763"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGTACGCACAATGGGGAGTCAAAAGAAGGTAGATCATTCTTGCCTTTTGTTCCTGACCTGAATAGGTGCTGAATTTTTTTAGTGCATGTTTCAGTCATACAGCTATTCCATTTTACCATGGCAAGAAGTTTCTTAGATTCTGGGACAAAATGCAGGGACTTCTGTCCAGTGATTAAATATGCTAACACTGTTAATCTTTGGTATTATTCTAGAGACTCGAGAGCTTTTGAGGATACTTTTTTATGCATCCTATGTTTCAAATGGTATCAGCTTACCTCTTTCAGTTTTTAGAGTTACTGAGTTAGTATCTTTTCTCTTCTTTGATGTAATAAAGAGAGAAATATATTAATGACATGGATCTTAGAGGAAGTTGCTTCGTTTGAACACTTTAAATCTACTTTAACGTTCTAACAGTTTTAATAAATACAAGAAATTGTTAATTAGAATGTGGGAGGATTAAGGAAAAGCGAGAATAGGCTCTGAAGAAGTGACAATTTTCATATTTTTCTTGACGAGCGGAGGAAGTGGGAGCACATGTAAACAGAAGACTGTGTTTAGTTCTTGGTTTTTGATTGCAGACCATGGAGTAGATCAAACCTGAGAACTGTTGCACTTTTTAGGATTACTGGATCTTGTTTCACTGATTACTTTGTCTGATAATGCAGATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCAT</genome_strand>
        <mrna_strand>TCAAGTACGCACAATGGGGAGTCAAAAGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGG-AACCATTTATGCAGAGCGGTTCTTTGCGCAGAAG-CTCACACATGATGAATCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E334044" ref_strand="+" ref_description="SGN-E334044 [cTOD-24-M14]">
      <seq>tcaagtacgcacaatggggagtcaaaagaagatattttgctatgaactggattaggaagctatcaatggcatgttatttatttgttagaaatgctgctcatcccagttcaacatttctactttgtgttccatatgtaggttaagagaggagtagtttgaattattatctcaaaaatgaaaataaaaagaagtttgaatgttggtatataccgtccttaagctgacttttctaaatgatgcttcacaatcaagctagaaaaagactaagcaagtgatgtcctaatgaaatggtgcactgaagagtgcactggcaggagtgagattcgatcttcacagattattcggtggggatgtgcttctgaaaagcatgatcctgagtccagattcctctgtcaaatcatacgttcaagtctgtcaattgatttctctcttgctcattgacagttggtgtgaactggaaatccagaaacgctgcgcacacccattcatctaatgtttttcctaaggatggtgatttcctggataataaattcagtgcttcaggtagctagctccagttgtagatcagacttcctgttaatttccagacgggaggaatcttttacaattgtagctggcagatcaacagagaatgtctcatttaaggaatctcttgtacttgataacagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="91079" stop="92984"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91379" g_stop="91409" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91410" i_stop="92046" i_length="637">
            <donor d_prob="0.966" d_score="0.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92047" g_stop="92684" g_length="638"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="669" r_length="638" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E334044" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>669</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E334044" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91379" e_stop="91409"/>
          <exon e_start="92047" e_stop="92684"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGTACGCACAATGGGGAGTCAAAAGAAGGTAGATCATTCTTGCCTTTTGTTCCTGACCTGAATAGGTGCTGAATTTTTTTAGTGCATGTTTCAGTCATACAGCTATTCCATTTTACCATGGCAAGAAGTTTCTTAGATTCTGGGACAAAATGCAGGGACTTCTGTCCAGTGATTAAATATGCTAACACTGTTAATCTTTGGTATTATTCTAGAGACTCGAGAGCTTTTGAGGATACTTTTTTATGCATCCTATGTTTCAAATGGTATCAGCTTACCTCTTTCAGTTTTTAGAGTTACTGAGTTAGTATCTTTTCTCTTCTTTGATGTAATAAAGAGAGAAATATATTAATGACATGGATCTTAGAGGAAGTTGCTTCGTTTGAACACTTTAAATCTACTTTAACGTTCTAACAGTTTTAATAAATACAAGAAATTGTTAATTAGAATGTGGGAGGATTAAGGAAAAGCGAGAATAGGCTCTGAAGAAGTGACAATTTTCATATTTTTCTTGACGAGCGGAGGAAGTGGGAGCACATGTAAACAGAAGACTGTGTTTAGTTCTTGGTTTTTGATTGCAGACCATGGAGTAGATCAAACCTGAGAACTGTTGCACTTTTTAGGATTACTGGATCTTGTTTCACTGATTACTTTGTCTGATAATGCAGATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGT</genome_strand>
        <mrna_strand>TCAAGTACGCACAATGGGGAGTCAAAAGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTTACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E257256" ref_strand="+" ref_description="SGN-E257256 [cLEG-46-K11]">
      <seq>gctatgaactggattaggaagctatcaatggcatgttatttatttgttagaaatgctgctcatcccagttcaacatttctactttgtgttccatatgtaggttaagagaggagtagtttgaattattatctcaaaaatgaaaataaaaagaagtttgaatgttggtatataccgtccttaagctgacttttctaaatgatgcttcacaatcaagctagaaaaagactaagcaagtgatgtcctaatgaaatggtgcactgaagagtgcactggcaggagtgagattcgatcttcacagattattcggtggggatgtgcttctgaaaagcatgatcctgagtccagattcctctgtcaaatcatacgttcaagtctgtcaattgatttctctcttgctcattgacagttggtgtgaactggaaatccagaaacgctgcgcacacccattcatctaatgtttttcctaaggatggtgatttcctggataataaattcagtgcttcaggtagctagctccagttgtagatcagacttcctgttaatttccagacgggaggaatctttaacaattgtagctggcagatncacagagaatgtctcatttaaggaatctcttgtacttgataacagttcaaatgtaaagcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="91754" stop="93000"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92054" g_stop="92700" g_length="647"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="647" r_length="647" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E257256" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E257256" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92054" e_stop="92700"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATG</genome_strand>
        <mrna_strand>GCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATNCACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E392437" ref_strand="+" ref_description="SGN-E392437 [TUS-34-C18]">
      <seq>agcaagtgatgtcctaatgaaatggtgcactgaagagtgcactggcaggagtgagattcgatcttcacagattattcggtggggatgtgcttctgaaaagcatgatcctgagtccagattcctctgtcaaatcatacgttcaagtctgtcaattgatttctctcttgctcattgacagttggtgtgaactggaaatccagaaacgctgcgcacacccattcatctaatgtttttcctaaggatggtgatttcctggataataaattcagtgcttcaggtagctagctccagttgtagatcagacttcctgttaatttccagacgggaggaatctttaacaattgtagctggcagatcaacagagaatgtctcatttaaggaatctcttgtacttgataacagttcaaatgtaaagcatgagagaaggaaaccatttatgcagagcggttctttgcgcagaagcctcacacatgatgaatcatcttttgatagttatgaagatattaagtttgaaaaaagtaaggaaatatgatttgagaagttttgctggggcaaaactaaaagcaaggcattgcaaagtcaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="91982" stop="93268"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92282" g_stop="92799" g_length="518"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="518" r_length="518" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92800" i_stop="92901" i_length="102">
            <donor d_prob="0.514" d_score="1.00"/>
            <acceptor a_prob="0.637" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92902" g_stop="92968" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="519" r_stop="585" r_length="67" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E392437" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E392437" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92282" e_stop="92799"/>
          <exon e_start="92902" e_stop="92968"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAAGTAAATACAGAACCAAACAAAATCACCTATAATATGATTTTAGTGTTGAATTTGAAGTAGCTGAGGATGTTAATCAGGTCTTAAATCATAGGTCTCTTTCAGGTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAA</genome_strand>
        <mrna_strand>AGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAA......................................................................................................GTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAAAGCAAGGCATTGCAAAGTCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E369255" ref_strand="+" ref_description="SGN-E369255 [TUS-25-G18]">
      <seq>gcaagtgatgtcctaatgaaatggtgcactgaagagtgcactggcaggagtgagattcgatcttcacagattattcggtggggatgtgcttctgaaaagcatgatcctgagtccagattcctctgtcaaatcatacgttcaagtctgtcaattgatttctctcttgctcattgacagttggtgtgaactggaaatccagaaacgctgcgcacacccattcatctaatgtttttcctaaggatggtgatttcctggataataaattcagtgcttcaggtagctagctccagttgtagatcagacttcctgttaatttccagacgggaggaatctttaacaattgtagctggcagatcaacagagaatgtctcatttaaggaatctcttgtacttgataacagttcaaatgtaaagcatgagagaaggaaaccatttatgcagagcggttctttgcgcagaagcctcacacatgatgaatcatcttttgatagttatgaagatattaagtttgaaaaaagtaaggaaatatgatttgagaagttttgctggggcaaaactaagagcaaggcattgcagagtcaaaatagattcagaaaagtctgcattaaccaggacattctagaagaatacgatcatcggatggacttctttgaacagact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="91983" stop="93344"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92283" g_stop="92799" g_length="517"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="517" r_length="517" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92800" i_stop="92901" i_length="102">
            <donor d_prob="0.514" d_score="1.00"/>
            <acceptor a_prob="0.637" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92902" g_stop="93044" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="518" r_stop="660" r_length="143" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E369255" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369255" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92283" e_stop="92799"/>
          <exon e_start="92902" e_stop="93044"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAAGTAAATACAGAACCAAACAAAATCACCTATAATATGATTTTAGTGTTGAATTTGAAGTAGCTGAGGATGTTAATCAGGTCTTAAATCATAGGTCTCTTTCAGGTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACT</genome_strand>
        <mrna_strand>GCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAA......................................................................................................GTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E249077" ref_strand="+" ref_description="SGN-E249077 [cLEF-49-F7]">
      <seq>gcaagtgatgtcctaatgaaatggtgcactgaagagtgcactggcgggagtgagattcgatcttcacagattattcggtggggatgtgcttctgaaaagcatgatcctgagtccagattcctctgtcaaatcatacgttcaagtctgtcaattgatttctctcttgctcattgacagttggtgtgaactggaaatccagaaacgctgcgcacacccattcatctaatgtttttcctaaggatggtgatttcctggataataaattcagtgcttcaggtagctagctccagttgtagatcagacttcctgttaatttccagacgggaggaatctttaacaattgtagctggcagatcaacagagaatgtctcatttaaggaatctcttgtacttgataacagttcaaatgtgaagcatgagagaaggaaaccatttatgcagagcggttctttgcgcagaagcctcacacatgatgaatcatcttttgatagttatgaagatattaagtttgaaaaaagtaaggaaatatgatttgagaagttttgctggggcaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="91983" stop="93241"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92283" g_stop="92799" g_length="517"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="517" r_length="517" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92800" i_stop="92901" i_length="102">
            <donor d_prob="0.514" d_score="1.00"/>
            <acceptor a_prob="0.637" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92902" g_stop="92941" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="518" r_stop="557" r_length="40" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E249077" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E249077" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92283" e_stop="92799"/>
          <exon e_start="92902" e_stop="92941"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAAGTAAATACAGAACCAAACAAAATCACCTATAATATGATTTTAGTGTTGAATTTGAAGTAGCTGAGGATGTTAATCAGGTCTTAAATCATAGGTCTCTTTCAGGTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAAC</genome_strand>
        <mrna_strand>GCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCGGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTGAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAA......................................................................................................GTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E392419" ref_strand="+" ref_description="SGN-E392419 [TUS-34-A10]">
      <seq>cttcacagattattcggtggggatgtgcttctgaaaagcatgatcctgagtccagattcctctgtcaaatcatacgttcaagtctgtcaattgatttctctcttgctcattgacagttggtgtgaactggaaatccagaaacgctgcgcacacccattcatctaatgtttttcctaaggatggtgatttcctggataataaattcagtgcttcaggtagctagctccagttgtagatcagacttcctgttaatttccagacgggaggaatctttaacaattgtagctggcagatcaacagagaatgtctcatttaaggaatctcttgtacttgataacagttcaaatgtaaagcatgagagaaggaaaccatttatgcagagcggttctttgcgcagaagcctcacacatgatgaatcatcttttgatagttatgaagatattaagtttgaaaaaagtaaggaaatatgatttgagaagttttgctggggcaaaactaagagcaaggcattgcagagtcaaaatagattcagaaaagtctgcattaaccaggacattctaaaagaatacgatcatcggatggacttctttgaacagactgctgaaatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="92044" stop="93354"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92344" g_stop="92799" g_length="456"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="456" r_length="456" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92800" i_stop="92901" i_length="102">
            <donor d_prob="0.514" d_score="1.00"/>
            <acceptor a_prob="0.637" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92902" g_stop="93054" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="609" r_length="153" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E392419" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>609</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E392419" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92344" e_stop="92799"/>
          <exon e_start="92902" e_stop="93054"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAAGTAAATACAGAACCAAACAAAATCACCTATAATATGATTTTAGTGTTGAATTTGAAGTAGCTGAGGATGTTAATCAGGTCTTAAATCATAGGTCTCTTTCAGGTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGT</genome_strand>
        <mrna_strand>CTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAA......................................................................................................GTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAAAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E247894" ref_strand="+" ref_description="SGN-E247894 [cLEF-47-B19]">
      <seq>ttcacagattattcggtggggatgtgcttctgaaaagcatgatcctgagtccagattcctctgtcaaatcatacgttcaagtctgtcaattgatttctctcttgctcattgacagttggtgtgaactggaaatccagaaacgctgcgcacacccattcatctaatgtttttcctaaggatggtgatttcctggataataaattcagtgcttcaggtagctagctccagttgtagatcagacttcctgttaatttccagacgggaggaatctttaacaattgtagctggcagatcaacagagaatgtctcatttaaggaatctcttgtacttgataacagttcaaatgtaaagcatgagagaaggaaaccatttatgcagagcggttctttgcgcagaagcctcacacatgatgaatcatcttttgatagttatgaagatattaagtttgaaaaaagtaaggaaatatgatttgagaagttttgctggggcaaaactaagagcaaggcattgcagagtcaaaatagattcagaaaagtctgcattaaccaggacattctagaagaatacgatcatcggatggacttctttgaacagactgctgaaatgtatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="92045" stop="93357"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92345" g_stop="92799" g_length="455"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="455" r_length="455" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92800" i_stop="92901" i_length="102">
            <donor d_prob="0.514" d_score="1.00"/>
            <acceptor a_prob="0.637" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92902" g_stop="93057" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="611" r_length="156" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E247894" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>611</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E247894" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92345" e_stop="92799"/>
          <exon e_start="92902" e_stop="93057"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAAGTAAATACAGAACCAAACAAAATCACCTATAATATGATTTTAGTGTTGAATTTGAAGTAGCTGAGGATGTTAATCAGGTCTTAAATCATAGGTCTCTTTCAGGTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGTATG</genome_strand>
        <mrna_strand>TTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAA......................................................................................................GTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E369254" ref_strand="+" ref_description="SGN-E369254 [TUS-25-G18](-)">
      <seq>atgcgtgggttgtttatagttcaggtccttctgaattctattatgaaggagatgatttgtcacttttacattctcatggtgtagataaccttaataattatttgacaccacgagctatgctctcctctagggtggatggaactcgggtaaatggattgatacgggaaatcaaggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatggagaagttttttgccacaaatgagtcttcaagaaaagcagcagtaaataacatatattgtgactgttcgtgatgtgccacttatgccagaaactacagcgataaggagagtgcagcattctgcagaagctatctgctcggagcttccacatctatgtaatcaatcttcacccaagttgtggtgactgtgtattctctgatgaaaggccaagtatgaaaatgaaactagctaacatctggaataacaaattacaagctcaaaggggagtgtacaagtacactcaatggggattcaaaagaaggttctgtgtagctggggtgttggggcatctccaatccaaacacctaattttacaccaaatttggtgttaaccaaatttactgtaatcaactccaacctactgcatcgaaaaataatttattttctctcattattattattattattttttatttcatttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="93043" stop="95670"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93343" g_stop="93677" g_length="335"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="335" r_length="335" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93678" i_stop="93766" i_length="89">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93767" g_stop="93882" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="336" r_stop="451" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93883" i_stop="93985" i_length="103">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="93986" g_stop="94081" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="547" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="94082" i_stop="95208" i_length="1127">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95209" g_stop="95367" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="548" r_stop="706" r_length="159" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E369254" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369254" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93343" e_stop="93677"/>
          <exon e_start="93767" e_stop="93882"/>
          <exon e_start="93986" e_stop="94081"/>
          <exon e_start="95209" e_stop="95367"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGAAAGAAAATCTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCAAGTTGTGGTGACTGTGTATTCTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGCAACTCACATAACCTGATGTCTCTTTCTTCAGGCCAAGTATGAAAATGAAACTAGCTAACATCTGGAATAACAAATTACAAGCTCAAAGGGGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACGATTCTCGCCATTTCCTGACCTGAATAACAGCTGAATTTTTCTAGTGCATGTTTTTCAGTTAATTAGCTTCATTTCTTCTTCTTTTTTGGGTAATAACTGTGAACTACTACCATTACTCCAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTATGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTCCAGGAAAAAAAACCATAAGCTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTGCTTTCTAGTTAATCTTCTCAGCAGATTCTGACACCACGCGGTTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATGGATCATTGCCCCTCATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTAAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATAGGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTGAGGAAATATCTGTGTTGGAACTTCATTTGATTGTTTGTTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATCTTTTCATTCGTTTAGGAATAATTTGGACCTGGAGCACAGTGCAAATAAATGCATGGAGCAACTCTCTATCTCTCTTCCACACACACACATGAAAAATAGTAAAACGGAACATATTGTATAGATTGAGGGTTTAAAGCCTTTCAAGTGTCGTTTGATCATTTTATGTTCTAATAGGGTTAATTAAGACAAGTGAATTACGAGTTGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTTCAATTTAATTTGGAAAACTATTCACGACATCATTCATGTTTTAGGAAATACTTCACTATCTAACAATATTCCCTTGCACGTGTTTTGTAAGAAAATGATTGGTTCTTTTTTTCTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTGGGGCATCTCCAATCCAAACACCTAATTTTACACCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAACCTACTGCATCGAAAAATAATTTATTTTCTCTCATTATTATTATTATTATTTTTTATTTCATTT</genome_strand>
        <mrna_strand>ATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCAAGTTGTGGTGACTGTGTATTCTCTGATGAAAG.......................................................................................................GCCAAGTATGAAAATGAAACTAGCTAACATCTGGAATAACAAATTACAAGCTCAAAGGGGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGTGTAGCTGGGGTGTTGGGGCATCTCCAATCCAAACACCTAATTTTACACCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAACCTACTGCATCGAAAAATAATTTATTTTCTCTCATTATTATTATTATTATTTTTTATTTCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E548087" ref_strand="+" ref_description="SGN-E548087 [TUS-57-P13](-)">
      <seq>aggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatggagaagttttttgccacaaatgagtcttcaagaaaagcagcagtaaataacatatattgtgactgttcgtgatgtgccacttatgccagaaactacagcgataaggagagtgcagcattctgcagaagctatctgctcggagcttccacatctatgtaatcaatcttcacccaagttgtggtgactgtgtattctctgatgaaaggccaagtatgaaaatgaaactagctaacatctggaataacaaattacaagctcaaaggggagtgtacaagtacactcaatggggattcaaaagaaggttctgtgtagctggggtgttggggcatctccaatccaaacacctaattttacaccaaatttggtgttaaccaaatttactgtaatcaactccaacctactgcatcgaaaaataatttattttctctcattattattattattattttttatttcatttatatttttttatttcataaaacatttttttcaaaaaaaaaaaaaaaaaactcgaggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="93214" stop="95701"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93514" g_stop="93677" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="164" r_length="164" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93678" i_stop="93766" i_length="89">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93767" g_stop="93882" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="280" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93883" i_stop="93985" i_length="103">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="93986" g_stop="94081" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="376" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="94082" i_stop="95208" i_length="1127">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95209" g_stop="95400" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="567" r_length="191" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="568" polyA_stop="585"/>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E548087" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="0.959" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E548087" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93514" e_stop="93677"/>
          <exon e_start="93767" e_stop="93882"/>
          <exon e_start="93986" e_stop="94081"/>
          <exon e_start="95209" e_stop="95400"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGAAAGAAAATCTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCAAGTTGTGGTGACTGTGTATTCTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGCAACTCACATAACCTGATGTCTCTTTCTTCAGGCCAAGTATGAAAATGAAACTAGCTAACATCTGGAATAACAAATTACAAGCTCAAAGGGGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACGATTCTCGCCATTTCCTGACCTGAATAACAGCTGAATTTTTCTAGTGCATGTTTTTCAGTTAATTAGCTTCATTTCTTCTTCTTTTTTGGGTAATAACTGTGAACTACTACCATTACTCCAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTATGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTCCAGGAAAAAAAACCATAAGCTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTGCTTTCTAGTTAATCTTCTCAGCAGATTCTGACACCACGCGGTTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATGGATCATTGCCCCTCATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTAAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATAGGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTGAGGAAATATCTGTGTTGGAACTTCATTTGATTGTTTGTTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATCTTTTCATTCGTTTAGGAATAATTTGGACCTGGAGCACAGTGCAAATAAATGCATGGAGCAACTCTCTATCTCTCTTCCACACACACACATGAAAAATAGTAAAACGGAACATATTGTATAGATTGAGGGTTTAAAGCCTTTCAAGTGTCGTTTGATCATTTTATGTTCTAATAGGGTTAATTAAGACAAGTGAATTACGAGTTGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTTCAATTTAATTTGGAAAACTATTCACGACATCATTCATGTTTTAGGAAATACTTCACTATCTAACAATATTCCCTTGCACGTGTTTTGTAAGAAAATGATTGGTTCTTTTTTTCTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTGGGGCATCTCCAATCCAAACACCTAATTTTACACCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAACCTACTGCATCGAAAAATAATTTATTTTCTCTCATTATTATTATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAACATTTTCTTTCT</genome_strand>
        <mrna_strand>AGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCAAGTTGTGGTGACTGTGTATTCTCTGATGAAAG.......................................................................................................GCCAAGTATGAAAATGAAACTAGCTAACATCTGGAATAACAAATTACAAGCTCAAAGGGGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGTGTAGCTGGGGTGTTGGGGCATCTCCAATCCAAACACCTAATTTTACACCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAACCTACTGCATCGAAAAATAATTTATTTTCTCTCATTATTATTATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAACATTTT-TTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E392436" ref_strand="+" ref_description="SGN-E392436 [TUS-34-C18](-)">
      <seq>tcaagaaaagcagcggtaaataacatatattgtgactgttcgtgatgtgccacttatgccagaaactacagcgataaggagagtgcagcattctgcagaagctatctgctcggagcttccacatttatgtaatcaatcttcacccaagttgtggtgactgtgtattctctgatgaaaggccaagtatgaaaatgaaactagctaacatctggaataacaaattacaagctcaaaggggagtgtacaagtacactcaatggggattcaaaagaaggttctgtgtagctggggtgttggggcatctccaatccaaacacctaattttacaccaaatttggtgttaaccaaatttactgtaatcaactccaacctactgcatcgaaaaataatttattttctctcattattattattattattttttatttcatttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="93316" stop="95670"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93616" g_stop="93677" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93678" i_stop="93766" i_length="89">
            <donor d_prob="0.886" d_score="0.98"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93767" g_stop="93882" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="178" r_length="116" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93883" i_stop="93985" i_length="103">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="93986" g_stop="94081" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="274" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="94082" i_stop="95208" i_length="1127">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95209" g_stop="95367" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="433" r_length="159" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="434" polyA_stop="443"/>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E392436" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E392436" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93616" e_stop="93677"/>
          <exon e_start="93767" e_stop="93882"/>
          <exon e_start="93986" e_stop="94081"/>
          <exon e_start="95209" e_stop="95367"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGAAAAGCAGCAGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGAAAGAAAATCTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCAAGTTGTGGTGACTGTGTATTCTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGCAACTCACATAACCTGATGTCTCTTTCTTCAGGCCAAGTATGAAAATGAAACTAGCTAACATCTGGAATAACAAATTACAAGCTCAAAGGGGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACGATTCTCGCCATTTCCTGACCTGAATAACAGCTGAATTTTTCTAGTGCATGTTTTTCAGTTAATTAGCTTCATTTCTTCTTCTTTTTTGGGTAATAACTGTGAACTACTACCATTACTCCAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTATGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTCCAGGAAAAAAAACCATAAGCTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTGCTTTCTAGTTAATCTTCTCAGCAGATTCTGACACCACGCGGTTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATGGATCATTGCCCCTCATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTAAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATAGGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTGAGGAAATATCTGTGTTGGAACTTCATTTGATTGTTTGTTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATCTTTTCATTCGTTTAGGAATAATTTGGACCTGGAGCACAGTGCAAATAAATGCATGGAGCAACTCTCTATCTCTCTTCCACACACACACATGAAAAATAGTAAAACGGAACATATTGTATAGATTGAGGGTTTAAAGCCTTTCAAGTGTCGTTTGATCATTTTATGTTCTAATAGGGTTAATTAAGACAAGTGAATTACGAGTTGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTTCAATTTAATTTGGAAAACTATTCACGACATCATTCATGTTTTAGGAAATACTTCACTATCTAACAATATTCCCTTGCACGTGTTTTGTAAGAAAATGATTGGTTCTTTTTTTCTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTGGGGCATCTCCAATCCAAACACCTAATTTTACACCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAACCTACTGCATCGAAAAATAATTTATTTTCTCTCATTATTATTATTATTATTTTTTATTTCATTT</genome_strand>
        <mrna_strand>TCAAGAAAAGCAGCGGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATTTATGTAATCAATCTTCACCCAAGTTGTGGTGACTGTGTATTCTCTGATGAAAG.......................................................................................................GCCAAGTATGAAAATGAAACTAGCTAACATCTGGAATAACAAATTACAAGCTCAAAGGGGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGTGTAGCTGGGGTGTTGGGGCATCTCCAATCCAAACACCTAATTTTACACCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAACCTACTGCATCGAAAAATAATTTATTTTCTCTCATTATTATTATTATTATTTTTTATTTCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E394403" ref_strand="+" ref_description="SGN-E394403 [TUS-40-B20]">
      <seq>ccggatccggagttccaattagcaataagagaaaaagaaaaaaagaagtgaaataagccttaaaaggccaaccccgagcttataaggaagaagatcagaataagtcattcaggtcattcattttacaaaagcatgaagttctttgccacgaatgagtcttcaagaatggtagcagtaactaacaaatattatgactgttcatgatgtgccgctcatgccaggagactgcagcagtctgcagaggctatctgctcggagcttccacatcaatataatcaatcttccacccaaagtcgtggtgatggtgtattctatgatgaaaggccaagtgtgaaagtgaaactagttaacatctggaacaacaaattactagctcaaggagagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="103137" stop="104325"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103437" g_stop="103657" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="221" r_length="221" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103658" i_stop="103761" i_length="104">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103762" g_stop="103863" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="323" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="103864" i_stop="103962" i_length="99">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103963" g_stop="104025" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="386" r_length="63" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E394403" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>386</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E394403" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103437" e_stop="103657"/>
          <exon e_start="103762" e_stop="103863"/>
          <exon e_start="103963" e_stop="104025"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGGAGCCGGAGTTCCAATTAGCAATAAGAGAAAAAGAAAAAAAGAAGTGAAATAAGCCTTAAAAGGCCAACCCCGAGCTTATAAGGAAGAAGATCAGAATAAGTCATTCAGGTCATTCATTTTACAAAAGCATGAAGTTCTTTGCCACGAATGAGTCTTCAAGAATGGTAGCAGTAACTAACAAATATTATGACTGTTCATGATGTGCCGCTCATGCCAGGTAATTTGTCCTTGAGTGCTTGTTTGTATTAATAATCAATGATGCAGAAAATGTGCCCAACTAATTAATGTTCTTCTCCGTCGTGCTGAAACTACATATGTAAGGAGACTGCAGCAGTCTGCAGAGGCTATCTGCTCGGAGCTTCCACATCAATATAATCAATCTTCCACCCAAAGTCGTGGTGATGGTGTATTCTATGATGAAAGTTAGGTCGTGTTATCAACTTTCTTGGAAGGGTTAGGTCTCTTTCTGATAAGGAATCAATTATGTTAGTAACTCACACGGCCTGATGTTTCTCTCTGCAGGCCAAGTGTGAAAATGAAACTAGTTAACATCTGGAACAACAAATTACAAGCTCAAGGAGAGTG</genome_strand>
        <mrna_strand>CCGGATCCGGAGTTCCAATTAGCAATAAGAGAAAAAGAAAAAAAGAAGTGAAATAAGCCTTAAAAGGCCAACCCCGAGCTTATAAGGAAGAAGATCAGAATAAGTCATTCAGGTCATTCATTTTACAAAAGCATGAAGTTCTTTGCCACGAATGAGTCTTCAAGAATGGTAGCAGTAACTAACAAATATTATGACTGTTCATGATGTGCCGCTCATGCCAG........................................................................................................GAGACTGCAGCAGTCTGCAGAGGCTATCTGCTCGGAGCTTCCACATCAATATAATCAATCTTCCACCCAAAGTCGTGGTGATGGTGTATTCTATGATGAAAG...................................................................................................GCCAAGTGTGAAAGTGAAACTAGTTAACATCTGGAACAACAAATTACTAGCTCAAGGAGAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E331157" ref_strand="+" ref_description="SGN-E331157 [cTOD-6-H10]">
      <seq>cggagccggagttccaattagcaataagagaaaaagaaaaaaagaagtgaaataagccttaaaaggccaaccccgagcttataaggaagaagatcagaataagtcattcaggtcattcattttacaaaagcatgaagttctttgccacgaatgagtcttcaagaatggtagcagtaactaacaaatattatgactgttcatgatgtgccgctcatgccaggagactgcagcagtctgcagaggctatctgctcggagcttccacatcaatataatcaatcttccacccaaagtcgtggtgatggtgtattctatgatgaaaggccaagtgtgaaaatgaaactagttaacatctggaacaacaaattacaagctcaaggagagtgtacaagtacacacgatggggagtcaatagaaggtgcaattatgcttggagatgcgttgttaccttcagcatgttctttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="103138" stop="104929"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103438" g_stop="103657" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="220" r_length="220" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103658" i_stop="103761" i_length="104">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103762" g_stop="103863" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="322" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="103864" i_stop="103962" i_length="99">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103963" g_stop="104057" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="417" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104058" i_stop="104581" i_length="524">
            <donor d_prob="0.815" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104582" g_stop="104629" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="465" r_length="48" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E331157" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>465</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331157" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103438" e_stop="103657"/>
          <exon e_start="103762" e_stop="103863"/>
          <exon e_start="103963" e_stop="104057"/>
          <exon e_start="104582" e_stop="104629"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGAGCCGGAGTTCCAATTAGCAATAAGAGAAAAAGAAAAAAAGAAGTGAAATAAGCCTTAAAAGGCCAACCCCGAGCTTATAAGGAAGAAGATCAGAATAAGTCATTCAGGTCATTCATTTTACAAAAGCATGAAGTTCTTTGCCACGAATGAGTCTTCAAGAATGGTAGCAGTAACTAACAAATATTATGACTGTTCATGATGTGCCGCTCATGCCAGGTAATTTGTCCTTGAGTGCTTGTTTGTATTAATAATCAATGATGCAGAAAATGTGCCCAACTAATTAATGTTCTTCTCCGTCGTGCTGAAACTACATATGTAAGGAGACTGCAGCAGTCTGCAGAGGCTATCTGCTCGGAGCTTCCACATCAATATAATCAATCTTCCACCCAAAGTCGTGGTGATGGTGTATTCTATGATGAAAGTTAGGTCGTGTTATCAACTTTCTTGGAAGGGTTAGGTCTCTTTCTGATAAGGAATCAATTATGTTAGTAACTCACACGGCCTGATGTTTCTCTCTGCAGGCCAAGTGTGAAAATGAAACTAGTTAACATCTGGAACAACAAATTACAAGCTCAAGGAGAGTGTACAAGTACACACGATGGGGAGTCAATAGAAGGTAAACCATTAGGCCATTCCTGCCATTTGTTCCTGTCCTGAATAAGAGCTGAAATTTTTCTAGTGCATGTTTCAGTTAATTAGCTTCATTTCTTTCACCCAATTTTTCAAGATTATCTTAAACTACATTCTTATTAATCATGAAAGCATTATAGATTACCATGTCTCGTTACATGCTTCCTGGGCCGCATAAACTCTTTCAAATTCCATCTGATCTTGTAATAGAATTGTTATGCCTGACATTTTTTACTTACAATTTCAGAATTCGCACCAACAAAAACTCAAAAAGTTTCTTATTTCTCGGACAAAATTTCAGAAGTTGCACCAAAAATTATTTTGAGATATTTTTCTTTATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATGGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACGGCTACTAATTTTGGGGTGCAGCATAATTGATGGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGGTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTCTTTCA</genome_strand>
        <mrna_strand>CGGAGCCGGAGTTCCAATTAGCAATAAGAGAAAAAGAAAAAAAGAAGTGAAATAAGCCTTAAAAGGCCAACCCCGAGCTTATAAGGAAGAAGATCAGAATAAGTCATTCAGGTCATTCATTTTACAAAAGCATGAAGTTCTTTGCCACGAATGAGTCTTCAAGAATGGTAGCAGTAACTAACAAATATTATGACTGTTCATGATGTGCCGCTCATGCCAG........................................................................................................GAGACTGCAGCAGTCTGCAGAGGCTATCTGCTCGGAGCTTCCACATCAATATAATCAATCTTCCACCCAAAGTCGTGGTGATGGTGTATTCTATGATGAAAG...................................................................................................GCCAAGTGTGAAAATGAAACTAGTTAACATCTGGAACAACAAATTACAAGCTCAAGGAGAGTGTACAAGTACACACGATGGGGAGTCAATAGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTCTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E331158" ref_strand="+" ref_description="SGN-E331158 [cTOD-6-H12]">
      <seq>agaagatcagaataagtcattcaggtcattcatttaacaaaagcatgaagttctttgccacgaatgagtcttcaagaatggtagcagtaactaacaaatattatgactgttcatgatgtgccgctcatgccaggagactgcagcactctgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="103225" stop="103963"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103525" g_stop="103657" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="133" r_length="133" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103658" i_stop="103761" i_length="104">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103762" g_stop="103780" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="152" r_length="19" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E331158" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>152</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331158" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103525" e_stop="103657"/>
          <exon e_start="103762" e_stop="103780"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGATCAGAATAAGTCATTCAGGTCATTCATTTTACAAAAGCATGAAGTTCTTTGCCACGAATGAGTCTTCAAGAATGGTAGCAGTAACTAACAAATATTATGACTGTTCATGATGTGCCGCTCATGCCAGGTAATTTGTCCTTGAGTGCTTGTTTGTATTAATAATCAATGATGCAGAAAATGTGCCCAACTAATTAATGTTCTTCTCCGTCGTGCTGAAACTACATATGTAAGGAGACTGCAGCAGTCTGCA</genome_strand>
        <mrna_strand>AGAAGATCAGAATAAGTCATTCAGGTCATTCATTTAACAAAAGCATGAAGTTCTTTGCCACGAATGAGTCTTCAAGAATGGTAGCAGTAACTAACAAATATTATGACTGTTCATGATGTGCCGCTCATGCCAG........................................................................................................GAGACTGCAGCACTCTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E316516" ref_strand="+" ref_description="SGN-E316516 [cTOA-25-C18]">
      <seq>agaaccggaagctaccggagtatagaactcgccaccgtcgcagaagcggaacctaccggagtataaaactcgccaccgtcgcaggaccggaacatcatacgcaaccggatgaaaacccctaaaaccgaatcgattttcccgccgtcagcttcccatcatgttagaattcttgaaaaatctggtaactcgatggtacagaggtggatggaactcgggtaaatggattgatacgggaaatcaaggtagaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccagagcatggagaagtttttgccacaaatgagtcttcaagaaaagcagcagtaaataacaaatattgtgactgttcgtgatgtgccacttatgccagaaactacagcgacaaggagactgcagcattctgcagaagctatctgctcggagcttccacatctatgtaatcgatcttcaccccgagttgtggtgactgtgtattgtctgatgaaaggccgaggatgaaaatgagactagttaacatctggaataacaaattacaagctcataggagagtgtacaagtacactcgatggggattcaaaagaaggttctgtgtagctggggtgttatggcatctccaatccaaacacctaattttacatcagatttggtgttaaccaaatttactgtaatcaactccaatctact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="116373" stop="123251"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116673" g_stop="116871" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="199" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116872" i_stop="121074" i_length="4203">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.431" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121075" g_stop="121278" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="403" r_length="204" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121279" i_stop="121367" i_length="89">
            <donor d_prob="0.929" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121368" g_stop="121484" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="520" r_length="117" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="121485" i_stop="121587" i_length="103">
            <donor d_prob="0.292" d_score="0.96"/>
            <acceptor a_prob="0.972" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="121588" g_stop="121683" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="616" r_length="96" r_score="0.948"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="121684" i_stop="122850" i_length="1167">
            <donor d_prob="0.712" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="122851" g_stop="122951" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="617" r_stop="717" r_length="101" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E316516" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>717</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E316516" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116673" e_stop="116871"/>
          <exon e_start="121075" e_stop="121278"/>
          <exon e_start="121368" e_stop="121484"/>
          <exon e_start="121588" e_stop="121683"/>
          <exon e_start="122851" e_stop="122951"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAACCGGAAGCTACCGGAGTATAGAACTCGCCACCGTCGCAGAAGCGGAACCTACCGGAGTATAAAACTCGCCACCGTCGCAGGACCGGAACATCATACGCAACCGGATGAAAACCCCTAAAACCGAATCGATTTTCCCGCCGTCAGCTTCCCATCATGTTAGAATTCTTGAAAAATCTGGTAACTCGATGGTACAGAGTAAGATTTTCTTATCCATGTTTAAAGAAATCATTCTTTTTTTTAAGAAATTCAAGAAATCTTTTCTTTCTTAAAAAATCAAGAATTTGTGTTTACTTCTTTAAGGAGAGAGGGGATGAATGCCCGAGACTATTTCTGTCAATGGGGTTTTCTTGGATTATTGCACAAGTGTTGTTGACTAGTTCTTATAAAACAGAGTTGAATTTCTGTCAGGGGTTTTCTGAATGATTTCACCAGGGTTATTGATGAGTTGCTTTAAAACAGACTCAAATTTCTGTCCGAGTTTTCTTGAATGATTTTAAAAAAGCATCGATGCTGGTGCCACCAAGATGTACTAATTTACCCCTTCAAAGGTATTATATGGAAAGTTGTGGAGTTGTTCTTGAAGCCCCATTCGCACAATTCTAGTTTAATTATAAGAAGTTAAGTATTTTTGAATGAAGACACTCAATTAGGCAAACTTCCGTAAATGTCCTCAGTGACCAATTTCCTTTACATGGTCTATAGTATAGACCTTTTGACTTCGATTGTTTCTTCAAAATGGAAAATTGTGCCAGGTAAGAGAATGGTGAATTATATGGTTCGTGTTTTCTGATTTTGTTAATGTTTTGAGGATCTGTAGAGGTGGGCTGCTGCTAAGAACATCATAGTTATGTGAGTAACGATGAAAGTTGTGCTTTCATGCAGTTTTAATCTTTTACACTGTAGTTGCACCTGCAAATTTGTGTGTTGCTTGCAAAATAGGCAGTGACCAGAGAGGAGGCTCTTCATTGAATTCTTATGTTACTTTCTTTGCTACTTTGCACGATGAGAGCATATGTTTTATATGAAAATTGATATTCTCAGATGCTCCTTTTTGGTATATCATAATTTTCTTTATACACAACCCTTAGTTCTTTTTTCAATGAGATTTACTTCCTTAGAGGACTGTCCTTTCTATTTTCTTATGCTTAAAACTTGTGTACTCCTAGTTTGAACTTTAACCCAGTGTCAACTTTCCACCCGGTGTACCTGCTATATATAGATGGATGACAATGGTAAGTTTAGTTTCTTTGACATCGATTTAATGCATTTTGATGTGCAGAAAGTTCTACTCAATTTGTATTTTACTTTATCACTTCTTTTGAACGATCTGGTGTCTCATGCTGATGGGAGAAAGATATGGTAACATTTTTGCAAAATGTTAAAACTCACATCATCTCTTTTTTTTAATGATGCTGCTGTACATAATTTATTTTGCGTGACAACTATGATGTTCATAACTTGGAATGGTTGTTTAGTCTATAGGATTACATGCATTACTCAACTGATAGGCCGGTTGATGGTTTGTGTACATTAATATCTTTTTACAGATGTTCTTTATTTATTGTTTTGTGGTTTTACTTGTAATTGGGAGAACTGGTATGGCTGTACACAACACAAAATATTGGTGCTTACATTTTGTTTCTGCTTTTATTATAAGATCTCCATGTACGTCACTTTCTTGGTGCTTAATTTGACCTATTAAATATGCTAAAACTGTTGATGTTTGGTAGTACTGTAGGGACTCAAGAAATTTCGAGGATACTATTTTATGCATCCTTCGTTTCAAAAGTATCAACTTACCTCCTTCAGTTAAGAGCTACTGAGTTGATATCTTTTCTCTTCTTTGAAGTTATATAAGAGAGATATATATTAATGACATGGATCCTAGAGGAACTTGCTTCATTTGAACACTTCTTTTTGAGAATTAAAAATACTGCTTCATTTGAACACTTCTTTATACTGCTTCATTTGAATACTTTAAAGCTGCTTTAGCGTTATAACAGACAACAGTTCTAATAAATACAAGAAATTATTAAATAGAATGGGTCGATTAAGGAAAGGCGAGAATAGGCTCTGAGGAAGTGACAAAATTTTCATATTTTTCTTTAATGAGTTGAGGAAGTGGGAGCACATGTAATCAGAAGATGACGTTTAGTTCTTCTAAGTTTTCGACTGCAGACCATGACCAGATCAAACTTTAGAGCTGTTGCACTTTTTAGGATTACTGGATTTTGTTTCACTGATTACTTTGTCTGATAATGTAGACTCTTTGCTATGAACTGGATTAGGAAGATATTGACTTCAGTGCCATGTTATTTAATTGTTAGAAATGCTGGTAATCACCAGCTCATAATTTCTACTTTGTGTACCATACGTAGGTTAAGAGAGGAGTGATTTGAGTTATTATCTGAAAAAAGCAAAATAAAAAGAGGTGTGTGTGTGTGGGGTGGGACAAAATGCGGGGACTACTGTCCAGTGATTAAATATGCTAACACTGTTAATCTTTGGCATTATTCTAGAGACTCGAGAGCTTTTGAGGATACTTTTTTATGCATCCTATGTTTCAAATGGTATCAGCTTACCTCTTTCAGTTTTTAGAGTTACTGAGTTAGTATCTTTTCTCTTCTTTGAAGTTATAAAGAGAGAAATATATTAACGACATGGATCTTAGAGGAAGTTGCTTGGTTTGAACACTATAAAGCTACTTTAACGTTCTAACAGTTTTAATAAATACAAGAAATTGTTAATTAGAATGTGGGAGGATTAAGGAAAAGCGAGAATAGGCTCTGAAGAAGTGACAATTTTCATATTTTTCTTGACGAGCGGAGGAAGTGGGAGCACATGTAAACAGAAGACTGCGTTTAGTTCTTAGTTTTTGATTGCAGACCATGGAGTAGATCAAACCTGAGAACTGTTGCACTTTTTAGGATTACTGGATCTTGTTTCACTGATTACTTTGTCTGATAATGCAGACATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATGTATTTGTTAGAAATGCTGCTCATCCCAGCTCAGAATTTCTACTTTGTGTGTCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAAGGAAAATAAAAAGAAGTTTGAATGTTGATATATACCGTCCTTAAGCTGACTTTTCTAAACGATGCTTCACAATCAAGCTAGAAAATGACTAAGCAAGTGCTGTCCTAATGAAATGGTGGACTGAAGAGTGCACTGGTAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACCCCCATTCATCTAATGTTTTTCCTAAGGAGGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTGCCTGTTAATTTCCAGATGGGAGGAATTTTTAATAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTGATGCATGAGAGAAGGAAACCATTTATGCGGAGCGGTTCTTTGTGCAGAAGCCTGATACATGATGGATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAGAGTAAATACAGAACAAAACAAAATCACCTATAATATGATTTTAGTGTTGAATTTGAAGTAGCTGAGGATGTTAATCAGGTCTTAAATCATAGGTCTCTTTCAGGTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGTATGATTCCGTCCTGCCATATTTTAGTCCAGAACCGCGTCTCTTCTGTCACCAGATATCGGGACCTGGTTTCGAGATGTTAATCCTTACATTGCTGAAAATGGGATTGAAACTTCTGTTGAACATGAAGTTGGTCTCACGTATATTTTTAGAAACATGGAACATAATTTCGTTGTTCCTGCCATAAATAATTTGAGAAAAGACGACTGCTTGTTCCCAAATCCTGCAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGACAGAAAATGTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGTAACTCACATAACCTGATGTCTCTTTTTTCAGGCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACCATTCCCGCCATTTCCTGACCTGAACAAGAGCTGAATTTTTCTAGTGCATGTTTCAGTTAATTAGCTTCATTTCTTCTTTTTTTTGGGTAATAACTGTGAACTACTACCGTTACTCTAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTCTGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTACAGGAAAAAAAAACATAAGGTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTACTCTCTAGTTAATCTTCTCAGCAGATTCTGACACCATGCGGCTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATAGATCATTGCCCCTAATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTGAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATATGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTAGAGATACATTTATATGGGACATTGCAACATGAAATGGGTCTAAACTGACTAGCCGATTGTGACGCTCTGGTACTTTGGGAATTAAAGAGATCATTGTAGCATTATTTGCTTCAAAAGTTTTCCATTCCTAAAGAATTGCAAAACTGCCTCTGTAACATCATTGCCCACCACTTTCCAAGCCTTTTTGTAGTAATCACTTCCATATCCATCTAGACCGGGGCTCTTATTACTGCCAATGGTAAAAATGACTTTCTTGACATCATTTTTAGTATATTTCTTTATCAACTCAACCTGCTGAATGAATGTTAATGTATGACCATGTCTTTAGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTCCAATTAAATTGGAAACCTATTCACGACATCATCATGTTTTAGGAAATACTTCACTATCTAGTATTTTCTTGCACGTGTTTCGTAAGAAAATGATTGGTTCTTTTTTTTTTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACT</genome_strand>
        <mrna_strand>AGAACCGGAAGCTACCGGAGTATAGAACTCGCCACCGTCGCAGAAGCGGAACCTACCGGAGTATAAAACTCGCCACCGTCGCAGGACCGGAACATCATACGCAACCGGATGAAAACCCCTAAAACCGAATCGATTTTCCCGCCGTCAGCTTCCCATCATGTTAGAATTCTTGAAAAATCTGGTAACTCGATGGTACAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAGAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAGAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCGATCTTCACCCCGAGTTGTGGTGACTGTGTATTGTCTGATGAAAG.......................................................................................................GCCGAGGATGAAAATGAGACTAGTTAACATCTGGAATAACAAATTACAAGCTCATAGGAGAGTGTACAAGTACACTCGATGGGGATTCAAAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGTGTAGCTGGGGTGTTATGGCATCTCCAATCCAAACACCTAATTTTACATCAGATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E245170" ref_strand="+" ref_description="SGN-E245170 [cLEF-13-K12]">
      <seq>actttttaggattactggatcttgtttcactgattactttgtctgataatgcagacattttgctatgaactggattaggaagctatcaatggcatgttatgtatttgttagaaatgctgctcatcccagctcagaatttctactttgtgtgtcatatgtaggttaagagaggagtagtttgaattattatctcaaaaaggaaaataaaaagaagtttgaatgttgatatataccgtccttaagctgacttttctaaacgatgcttcacaatcaagctagaaaatgactaagcaagtgctgtcctaatgaaatggtggactgaagagtgcactggtaggagtgagattcgatcttcacagattattcggtggggatgtgcttctggaaagcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="119295" stop="120287"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="119595" g_stop="119987" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="393" r_length="393" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E245170" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>393</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E245170" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="119595" e_stop="119987"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTTTTAGGATTACTGGATCTTGTTTCACTGATTACTTTGTCTGATAATGCAGACATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATGTATTTGTTAGAAATGCTGCTCATCCCAGCTCAGAATTTCTACTTTGTGTGTCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAAGGAAAATAAAAAGAAGTTTGAATGTTGATATATACCGTCCTTAAGCTGACTTTTCTAAACGATGCTTCACAATCAAGCTAGAAAATGACTAAGCAAGTGCTGTCCTAATGAAATGGTGGACTGAAGAGTGCACTGGTAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATG</genome_strand>
        <mrna_strand>ACTTTTTAGGATTACTGGATCTTGTTTCACTGATTACTTTGTCTGATAATGCAGACATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATGTATTTGTTAGAAATGCTGCTCATCCCAGCTCAGAATTTCTACTTTGTGTGTCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAAGGAAAATAAAAAGAAGTTTGAATGTTGATATATACCGTCCTTAAGCTGACTTTTCTAAACGATGCTTCACAATCAAGCTAGAAAATGACTAAGCAAGTGCTGTCCTAATGAAATGGTGGACTGAAGAGTGCACTGGTAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGGAAAGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E392140" ref_strand="+" ref_description="SGN-E392140 [TUS-24-J16]">
      <seq>caaaatttgatcttgatttgtatgcttgttctaaagaggatatggggcagtataggggctcttgatgcgtgggttgtttatagttcaggtccttctgaattctattatgaaggagatgatttgtcacttttacattctcatggtgtagataaccttaataattatttgacaccacgagctatgctctcctctagggtggatggaactcgggtaaatggattgatacgggaaatcaaggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatggagaagtttttgccacaaatgagtcttcaagaaaagcagcagtaaataacaaatattgtgactgttcgtgatgtgccacttatgccagaaactacagcgacaaggagactgcagcattctgcagaagctatctgctcggagcttccacatctatgtaatcaatcttcaccccaagttgtggtgactgtgtattgtctgatgaaaggccaagtatgaaaatgaaactagttaacatctggaataacaaattacaagctcaaaggagagtgtacaagtacactcaatggggattcaaaagaaggttctgtgtagctggggtgttagggcatctccaatccaaacacctaattttacatcaaattttggtgtttaccaaatttactgtaatcaactccaatctactgcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="92979" stop="123255"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120881" g_stop="121278" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="398" r_length="398" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="121279" i_stop="121367" i_length="89">
            <donor d_prob="0.929" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121368" g_stop="121484" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="399" r_stop="515" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121485" i_stop="121587" i_length="103">
            <donor d_prob="0.292" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121588" g_stop="121683" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="516" r_stop="611" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="121684" i_stop="122850" i_length="1167">
            <donor d_prob="0.712" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="122851" g_stop="122955" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="612" r_stop="717" r_length="106" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E392140" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>716</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E392140" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120881" e_stop="121278"/>
          <exon e_start="121368" e_stop="121484"/>
          <exon e_start="121588" e_stop="121683"/>
          <exon e_start="122851" e_stop="122955"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGACAGAAAATGTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGTAACTCACATAACCTGATGTCTCTTTTTTCAGGCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACCATTCCCGCCATTTCCTGACCTGAACAAGAGCTGAATTTTTCTAGTGCATGTTTCAGTTAATTAGCTTCATTTCTTCTTTTTTTTGGGTAATAACTGTGAACTACTACCGTTACTCTAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTCTGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTACAGGAAAAAAAAACATAAGGTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTACTCTCTAGTTAATCTTCTCAGCAGATTCTGACACCATGCGGCTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATAGATCATTGCCCCTAATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTGAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATATGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTAGAGATACATTTATATGGGACATTGCAACATGAAATGGGTCTAAACTGACTAGCCGATTGTGACGCTCTGGTACTTTGGGAATTAAAGAGATCATTGTAGCATTATTTGCTTCAAAAGTTTTCCATTCCTAAAGAATTGCAAAACTGCCTCTGTAACATCATTGCCCACCACTTTCCAAGCCTTTTTGTAGTAATCACTTCCATATCCATCTAGACCGGGGCTCTTATTACTGCCAATGGTAAAAATGACTTTCTTGACATCATTTTTAGTATATTTCTTTATCAACTCAACCTGCTGAATGAATGTTAATGTATGACCATGTCTTTAGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTCCAATTAAATTGGAAACCTATTCACGACATCATCATGTTTTAGGAAATACTTCACTATCTAGTATTTTCTTGCACGTGTTTCGTAAGAAAATGATTGGTTCTTTTTTTTTTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAA-TTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCAT</genome_strand>
        <mrna_strand>CAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAG.......................................................................................................GCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTTGGTGTTTACCAAATTTACTGTAATCAACTCCAATCTACTGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E246635" ref_strand="+" ref_description="SGN-E246635 [cLEF-45-A11]">
      <seq>caaaatttgatcttgatttgtatgcttgttctaaagaggatatggggcagtataggggctcttgatgcgtgggttgtttatagttcaggtccttctgaattctattatgaaggagatgatttgtcacttttacattctcatggtgtagataaccttaataattatttgacaccacgagctatgctctcctctagggtggatggaactcgggtaaatggattgatacgggaaatcaaggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatggagaagtttttgccacaaatgagtcttcaagaaaagcagcagtaaataacaaatattgtgactgttcgtgatgtgccacttatgccagaaactacagcgacaaggagactgcagcattctgcagaagctatctgctcggagcttccacatctatgtaatcaatcttcaccccaagttgtggtgactgtgtattgtctgatgaaaagccaagtatgaaaatgaaactagttaacatctggaataacaaattacaagctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="92979" stop="121940"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120881" g_stop="121278" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="398" r_length="398" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="121279" i_stop="121367" i_length="89">
            <donor d_prob="0.929" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121368" g_stop="121484" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="399" r_stop="515" r_length="117" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121485" i_stop="121587" i_length="103">
            <donor d_prob="0.292" d_score="0.98"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121588" g_stop="121640" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="516" r_stop="568" r_length="53" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E246635" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E246635" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120881" e_stop="121278"/>
          <exon e_start="121368" e_stop="121484"/>
          <exon e_start="121588" e_stop="121640"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGACAGAAAATGTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGTAACTCACATAACCTGATGTCTCTTTTTTCAGGCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTC</genome_strand>
        <mrna_strand>CAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAA.......................................................................................................GCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E392139" ref_strand="+" ref_description="SGN-E392139 [TUS-24-J16](-)">
      <seq>gggcagtataggggttcttgatgcgtgggttgtttatagttcaggtctttttgaattctattatgaaggagatgatttgtcacttttacattctcatggtgtagataaccttaataattatttgacaccacgagctatgctctcctctagggtggatggaactcgggtaaatggattgatacgggaaatcaaggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatggagaagtttttgccacaaatgagtcttcaagaaaagcagcagtaaataacaaatattgtgactgttcgtgatgtgccacttatgccagaaactacagcgacaaggagactgcagcattctgcagaagctatctgctcggagcttccacatctatgtaatcaatcttcaccccaagttgtggtgactgtgtattgtctgatgaaaggccaagtatgaaaatgaaactagttaacatctggaataacaaattacaagctcaaaggagagtgtacaagtacactcaatggggattcaaaagaaggttctgtgtagctggggtgttagggcatctccaatccaaacacctaattttacatcaaatttggtgttaaccaaatttactgtaatcaactccaatctactgcatcgaaaaataatttattttctctctttattattatattattattttttattcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="93023" stop="123308"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120925" g_stop="121278" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="354" r_length="354" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="121279" i_stop="121367" i_length="89">
            <donor d_prob="0.929" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121368" g_stop="121484" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="355" r_stop="471" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121485" i_stop="121587" i_length="103">
            <donor d_prob="0.292" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121588" g_stop="121683" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="567" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="121684" i_stop="122850" i_length="1167">
            <donor d_prob="0.712" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="122851" g_stop="123016" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="568" r_stop="733" r_length="166" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E392139" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>733</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E392139" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120925" e_stop="121278"/>
          <exon e_start="121368" e_stop="121484"/>
          <exon e_start="121588" e_stop="121683"/>
          <exon e_start="122851" e_stop="123016"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGACAGAAAATGTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGTAACTCACATAACCTGATGTCTCTTTTTTCAGGCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACCATTCCCGCCATTTCCTGACCTGAACAAGAGCTGAATTTTTCTAGTGCATGTTTCAGTTAATTAGCTTCATTTCTTCTTTTTTTTGGGTAATAACTGTGAACTACTACCGTTACTCTAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTCTGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTACAGGAAAAAAAAACATAAGGTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTACTCTCTAGTTAATCTTCTCAGCAGATTCTGACACCATGCGGCTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATAGATCATTGCCCCTAATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTGAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATATGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTAGAGATACATTTATATGGGACATTGCAACATGAAATGGGTCTAAACTGACTAGCCGATTGTGACGCTCTGGTACTTTGGGAATTAAAGAGATCATTGTAGCATTATTTGCTTCAAAAGTTTTCCATTCCTAAAGAATTGCAAAACTGCCTCTGTAACATCATTGCCCACCACTTTCCAAGCCTTTTTGTAGTAATCACTTCCATATCCATCTAGACCGGGGCTCTTATTACTGCCAATGGTAAAAATGACTTTCTTGACATCATTTTTAGTATATTTCTTTATCAACTCAACCTGCTGAATGAATGTTAATGTATGACCATGTCTTTAGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTCCAATTAAATTGGAAACCTATTCACGACATCATCATGTTTTAGGAAATACTTCACTATCTAGTATTTTCTTGCACGTGTTTCGTAAGAAAATGATTGGTTCTTTTTTTTTTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTTATATT</genome_strand>
        <mrna_strand>GGGCAGTATAGGGGTTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCTTTTTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAG.......................................................................................................GCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E692867" ref_strand="+" ref_description="SGN-E692867 [LH_Ea09N09]">
      <seq>ttctcctctagggtggatggaactcgggtaaatggattgatacgggaaatcaaggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatggagaagttttttgccacaaatgagtcttcaagaaaagcagcagtaaataacaaatattgggattgttcgtgatgtgccacttatgccagaaactacagcgataaggagactgcagcattctgcagaagctatctgctcggagcttccacatcaatgtaatcaatcttcaccccaagttgtggtgactgtgtattgtctgatgaaaggccaagtatgaaaatgaaactagctatcatctggaataacaaattgcaagctcaaaggggagtgtacaagtacacacaatggggattcaaaagaagaatatgcacaagcaaaaactcaaagttacttagttctgggacaaaatttgagaattagcaccaaaaatgattttgagatattcttttttgttcctttgtctttattttcattttgtgttgggataataacccggatatggatagagtggaaaagattcaaaagaatgaggattaatatagcaggcctactaattttgggtgagtagcataattgatggactgattgctgctgatgttgccattctatttatttaaagtttttatttcgttggtgcaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="93163" stop="134981"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121064" g_stop="121278" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="121279" i_stop="121367" i_length="89">
            <donor d_prob="0.929" d_score="0.96"/>
            <acceptor a_prob="0.953" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121368" g_stop="121484" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="333" r_length="117" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121485" i_stop="121587" i_length="103">
            <donor d_prob="0.292" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121588" g_stop="121683" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="429" r_length="96" r_score="0.948"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="121684" i_stop="130874" i_length="9191">
            <donor d_prob="0.712" d_score="0.96"/>
            <acceptor a_prob="0.445" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="130875" g_stop="131157" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="716" r_length="287" r_score="0.809"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E692867" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>711</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E692867" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121064" e_stop="121278"/>
          <exon e_start="121368" e_stop="121484"/>
          <exon e_start="121588" e_stop="121683"/>
          <exon e_start="130875" e_stop="131157"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAG-TTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGACAGAAAATGTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGTAACTCACATAACCTGATGTCTCTTTTTTCAGGCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACCATTCCCGCCATTTCCTGACCTGAACAAGAGCTGAATTTTTCTAGTGCATGTTTCAGTTAATTAGCTTCATTTCTTCTTTTTTTTGGGTAATAACTGTGAACTACTACCGTTACTCTAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTCTGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTACAGGAAAAAAAAACATAAGGTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTACTCTCTAGTTAATCTTCTCAGCAGATTCTGACACCATGCGGCTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATAGATCATTGCCCCTAATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTGAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATATGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTAGAGATACATTTATATGGGACATTGCAACATGAAATGGGTCTAAACTGACTAGCCGATTGTGACGCTCTGGTACTTTGGGAATTAAAGAGATCATTGTAGCATTATTTGCTTCAAAAGTTTTCCATTCCTAAAGAATTGCAAAACTGCCTCTGTAACATCATTGCCCACCACTTTCCAAGCCTTTTTGTAGTAATCACTTCCATATCCATCTAGACCGGGGCTCTTATTACTGCCAATGGTAAAAATGACTTTCTTGACATCATTTTTAGTATATTTCTTTATCAACTCAACCTGCTGAATGAATGTTAATGTATGACCATGTCTTTAGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTCCAATTAAATTGGAAACCTATTCACGACATCATCATGTTTTAGGAAATACTTCACTATCTAGTATTTTCTTGCACGTGTTTCGTAAGAAAATGATTGGTTCTTTTTTTTTTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAACAAATTCTTTCTATGGTTCTCCTTTTATAATCGTTTAATATAAAATTATTTTGTATCATAATTTTTTAAATATATAAATTGCTAGCAAATATTATACAGTATACATAATAATGGATTATACAAATAAAAGTAAAATCATTAATGAAATACAATTAGATAAACGTTATATAATTGAAGATTTTATTTTAAATTATACATAAATATTAACTACGATGCTCCCATAAATGTTCTATTAATGCATTACGTAGTTTAAAATGAGCTTCTTGTCCTTCATTTTTTTTATATCGAGCTAAAAATTATTGAAATTGATAATTTTCGTCTATTGTCATTTCTACAGTCGGTGCTGGACCTTTCGATACATCTTGAATTGATGCATTAAGATCACGCACATTCTCAATTGTATTATTTTTAAAAAAATTTGTATGTTTGTATTTTTAATTTTATGAGGGTAAATTGTAGTTTATATAACTAATATATAGTATATTAACACAAATTTAATTTTTTAAAAAAGTCATATAAAGAAAAATTAATTTATAAAAAGCTAAATTTTATATCTAAATTAATATTATAAAAATATTCCATTGAAAATGATTAAATATACAAAAAAATATAATTAAAACATACAATTTATATAACGTTTAATTAAAAGTTTGTGTAGTGAAATAATATTATAATATTTAAAAAGTTATTTGGTGTGAAAATTAGTGCAGGTTAGAGCTTAAAACACCAAATTTCACACTAAATAAAATAATTAGTGTAGAATTTGGTGTTGGGTTGGAGATGGTCTTAGTCTAGCTAATGTGGAACTATCAAAATTTCTACAACAGTGTAGTCCATTGACACTTACAAGTACTCATATTTCACCTCATTGAATTAACTCTAATATTTCTCGTGTGAAATCTTGCTTATGTTCTTACTTAATTGTCATGTCATGTTCTCTGACTAAACTCCCCTTCTTTTTTTTTTTTGGTTACTTTATTGTTTTAATTAACTTCGATTTATTGCCCATATGTAGCTATTTTAGTAGTTTATTGTAGAGATTCTTTATATGTGTGCTTTATGGAGTTTACATTGCAATTATATCTCGTAATGTTAGCATACAACTTTCAAATTTCTATAATTTATTTTTCACTTTTTAATACTTATGGATGCTATTATGTTTGGTGTTAATTCAATATTATTACACAAAAATCTTATTTGTATAGATATTCTTGTGACTTGGACATTTTCTTTTATAGTGCAATCTCGTTGATAATTAAATGAGATGTTAATTGATAATTAGTAATTGTATGGAGCAACTAAAGTTATGGAAGTTTTGGTCTATTATTTATTTGAATTTAAGACTAATCTTTTCATTCTTATGTCTTTTCTCATCCTCCTTCAATGTTATTATGCAAAATTTCTAATGATTTTAGAATCTCGTACTTTGTGAATTATATTTTGTTTATTTATATATTAAGATATTTTTTTGTGCCGTTATATCTACTTTTCGGTGTATTTGAGATAATTAAGAATTTATTTTAACATTTAAAATAATTGTATTGTTACTTTGCTAAGTACGAGTCATGTTGACTTTGTGGCAGTTAAATGAAAATAACATGGATATTTTCTAGTTTAAGTGAAACAAAGTAATATGAATATGTTAAAAGTTTAAAATAAGATTTTATGGTCATAAGAGATGGATGTATTTAATTTTTGCTGTTTAGGATTAAAATTTTGAATTATAAATTTTGTAATCTAAATAGATATGTGAATATTGCATCTTTCTTCTTGCGATAGAAGTTAAACTCAGCTCTGACAGCTAATTATGTTCTTCCCATCCATAGTGACTGCAAGTTTACTTTTTATTGTATTTGAAAAATGAAGTATTCGCAAACTTTTTTTTTATTGTATTTTAAGGAGGAATAAGACCAAAAAAATGAGAATTAATGACGAGAAGAATATAGTTAGGGTCAATTTGGAAAGTCACTTGGTAATTGAAATTGGTGTAATTAATTACACTTACCTGTTTGGTTGCCACATTGTAATTACACTAAAATTACACATGTCGTGTTTGAATGTCAAAATGTAATAACACATGTTCTGTTTGTATGCATAAACGCAATCACAAAATTATGATAAATTTTAAAAATAAGAATTAATTATTTAAAATTTATACTAGACAAATAAGAAACTTTATAAATGACATTAAATTAAATAGTTAAGATATATATTCTTTTTTGAAAATATATTAATGAATAAACATATTTTCCGTAACTAATATTATGAAAAAATAATTGATTTATATTTTTAAAATTAATATCTTTCAATTGAATTGATCGTAACAACTAAAAATATGAAGTTTTCACGAACATCGTGAAATGCATGTTTGATAATAAGAATAATATATAAATAAAATGTCATAAATTATTAAATGTTTGACAAAAATGTTATCTATCAAGTCTAATTAAAAAAAATATTGTGCAATGTAAATTCAATATCTACTAAACAAATGAAACTGAAAATATGGCATAGCAAAATTTTGAACATAATACTCTTATAACAAATTTCAACATAGCAATAAATATGATTTATTCTTATTTTTCTTAGTTAAGAAAACGTAAGTCTATAAATTCTATTTTAATTAAAAATTAAAATACTAATAAAATCATGCTAATGAGAATATAAACATGGCAGATAGAAATAGATAATACGAAAAAAATTACATAAATACACGTAAAGTAAAGTTGAAAATAAGAAGAAAATAAAATATATAATAATGTAAAATAATAAATAAACTTTTACAAATTTTTAGAATAATAATAATAAAAAAAATTAAAATAATAGAAGCAAAGAAAATTAAAATAAAAATTGAAATAAAAAAATTAAAAAGTAATCAAGTGGTAATTACACCATGCAATATTAGAAATTCACCGCCTCTGCGGTTGAATTATAGAGTATAATCACCTCTGTCACTGACCAAGTAATTAAATATCCTTTCAAACAGGACAAAACAATTTAATTATATCAAATCTAATTACCAATATATCCTTCCAAACAGGTCCTAAGTTTTTGTTAAAATAGGCTTACTATCACTGAACAACTTGAAAATTAACTAATTTAAGTTAGTATATGATAACAATTTTCATATTATAAATGGAATAGTTATTTTTTAATTATTATTGTTATAATCAATGAAACAGAATTTTTTAATTAAAAAATTTGAAAAATAAATAAACAAGTACTAAAATAAAATAAAATAGAATAAATATATTATTATTAACGCGTTTATTTTTCTCCGCGTGTTCAAATGCTATAAATAAGAGCTCACTGCCCACTACAGAACTTCATACGCTATACTCACCACCGTCGCAGAACCGGAAGCTACCGGAGTATAGAACTCGCCACCGTCGCAGAAGCGGAAGCTAGCGGAGTATAGAACTCACCACCGTCGCAGGACCGGAACTTCATACGCAACCGGATGAAACCCCTAAAACCGAATCAATTTTCCCGCCGTCAGCTTCCCATCATGTTCGAATTCTTGAAAAATCTGGTAACTCGATGGTACTGTAAGATTTTCTTATCCATGTTTAAAATAATCAAAGAAATCATTCTTTATTTTAAGAAATTCAATAAATCTTTTCTTTCTTAAAAAATCAAGAATTTGTTTTCACTTCTTTAAGGAGAGAGGGGATGAATGCCCGAGACTATTTCTGTCAATGGGGTTTTCTTGGATTATTGCACAAGTGTTGTTGACTAGTTCTTATAAAACAGACTTGAATTTCTGTCAGGGGTTCCTGAATAATTTAACCTGGGTTATTGATGAGTTGCTTTAAAACAGACTCAAATTTCTGTATGGGTTTTCTTGAATGATTTTAAAAAAGATGTACTAATTTACCCCTTCAAAGGTATTGAATGGAAAGTTGTGGAGTTGTTCTTGAAGCCCCATTCGCACAATTCTAGTTTAATTATAAGAAGTTAAGTATTTTTGAATGAAGACACTCAATTAGGCAAACTTCCGTAAATGTCCTCAGTGACCAATTTCCTTTACATGGTCTATAGTATAGACCTTTTGACTTCGATTGTTTCTTCAAAATGGAAAATTGTGCCAGGTAAGAGAATGGTGAATTATATGGTTCGTGTTTTCTGATTTTGTTAATGTTTTGAGGATCTGTAGAGGTGGGCTGCTGCTAAGAACATCATAGTTATGTGAGTAACGATGAAAGTTGTGCTTTCATGCAGTTTTAATCTTTTACACTATAGTTGCACCTGCAAATTTGTGTGTTGCTTGCAAAATAGGCAGTGACCAGAGAGGAGGCTCTTCATTGAATTCTTATGTTACTTCCTTTGCTACTTTGCACGATGAGAGCATATGTTTTATATGAAAATTGATATTCTCAGATGCTCCTTTTCGGTGTATCATAATTTTCTTTATACACAACCCTTAGTTCTTTTTTCAATGAGATTTACTTCCTTAGAGGACTGTCCTTTCTATTTTCTTATGCTTATAACTTGTGTACTCTTAGTTTGAACTTTAACCCAGTGTCAACTTTCCACCCGGTGTACCTGCTATATATAGATGGATGACAATGGTAAGTTTAGTTTCTTTGACATCGATTTAATGCATTTTGATGTGCAGAAAGTTCTACTCAATTTGTATTTTACTTTATCACTTCTTTTGAACGATCTGGTGTCTCATGCTGATGGGAGAAAGATATGGTAACATTTTTGGAAAATGTTAGACTCACATCATCTCTTTTTTTTAATGATGCTGCTGTACATAATTTATTTTGCGTGACAACTATGATGTTCATAACTTGGAATGGTTGTTTAGTCTATAGGATTACATGCATTACCAACTGATAGGCCGGTTGATGGTTTGTGTACATTAATATCTTTTTACAGATGTTCTTTATTTATTGTTTTGTGGTTTTACTTGTAATTGGGAGAACTGGAATGGCTGTACACAACACAAAATATTGATGCTTACATTTTGTTTCTGCTTTTATTTTAAGATCTTCATGTCCATCACTTTCCTGGTGCTCAATTTGACCTATTAAATATGCTAAAACTGTTGATGTTTGGTAGTATTGTAGGGACTCAAGAAATTTCGAGGATACTATTTTATGCATCCTTCGTTTCAAAAGTATCAACTTACCTCCTTCAGTTAAGAGTTACTGAGTTGATATCTTTTCTCTTCTTTGAAGTAATAAAAGAGAGAGATATATTAATGACATGGATCCTAGAGGAACTTGCTTCATTTGAACACTTCTTTTTGAGAATTAAAAATACTGCTTCATTTGAATACTTTAAAGCTTCTTTAACGTTATAACAGACAACAGTTCTAATAAATACAAGAAATTATTAATTAGAATGGGACGATTAAGGAAAAGCGAGAATAGGCTTTGACGAAGTGACAAAATTTTCATATTTTTCTTTAATGAGTTGAGGAAGTGGGAGCACATGTAAACATAAGATGACGTTTAGTTCTTCTTAGTTTTCGACTGCAGACCATGACTAGATCAAACTTTAGAGCTGTTGCACTTTTTAGGATTACTGGATTTTGTTTCACTGATTACTTTGTCTGATAATGTAGACTCTTTGCTATGAACTGGATTAGGATGATAATGACTTCAATGCCATGTTATTTAATTGTTAGAAGTGCTGGTCATCACCAGCTCATAATTTCTACTTTGTGTACCATATGTAGGTTAAGAGAGGAGTGATTTGAGTTATTATCTGAAAGAAGCAAAATAAAAAGAGGTGTGTGTGTGTGTGTGGGGGGGGGGGGGTTCTTGTTTGTCTATTAGAACATGTCACTTGTTCATTTTTGTTCCATGTTAGATGTGCAATCCAATTGCCAGAATATGTGCAACATTTATATCCCTAGTTGGCACCATTGATACTGCTTCTGTTAATCTGATAAAGCTATTTTGATGTGCTTTATCGGTGAGAGCAATTCACTCGACATTTTTATTCAACTCTTAGGATTCATTGTATATGACGTTATTTGTACATGTGGCTTTGTTGAAGTATCCTTCTCATCTATTGCTATCCCATTCCCTGCACCATTTTTCAGATATATTATACCTGTGAATTATGATATCAGGAAAAAGAGGTGCAGGATCCAGAGTTACAAAGCGACACTTGAACTTCTTTCCTGCAGCCAAGAAATTGATTGGAGAATGCACTGTCAGGAGTGCAATTCGATCTTCACAGATTATTCTGTGGGGAAGTGCTTCTGCAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAGATCAAAAATTCAAGTCAGTCAATACTCAAATGATTGCTCTCTTGCTCCATTGCACAATCGGTGTGAATTGGAAATCCAGAAACTCTGCACACCCCTTTCATCTAATGTTTTACCTACGGAGGATGGTTTCCTGGATAACGAATTCAGTGTTTCAGCTAGCTCCAGTTACAAATCAGACTGCCTATTAGTTCTATGACTTCCTTTTCTCTTGAGCTACTTTTGGAAAGCCTAGATAAGAATATAGTTGTTGAAGTATCCTCCTCATCTGTTGCTATCCCATTCCCTGCTCCACTTTTCAGATATACCTGTGAATTATGAGATCAGGAAAAAGAGGTGCAGGACCCAGAGTTGCAAAGTGACACTTGAACTTCGTTCCTGCAGCCAAAGAAATTGACCGGAGAGTGCACTGTCAGGAGTTAGATTCGATCTTCACGGATTATTCTGTGGGGAAGTACTTCTGAAAAGCAAGATCCTGAGTCCAGATTCCTCTGTCAGATCAAAAGTACTTCACGGATTGTTTCCACATGCTGCAAAAAGAGATCTCGATTTTATGCTTGTTCTAAAGAGGATATGAGTATTATAGGGGAAGTTGATGCTTGGGATGTTTATAGTTCAGGTCCTTCTGCATTCTATTATGATGGAGATGATTTGTCACATATACATTCTCATGGTGAAGAAAACCTTAAAAATTATTTGACACTCGAGCTATGCTCTTCTCTAGGGTGGATGGGAACTCGGGTAAATGGATTGATGCTGGAAATCGAGGTAAAACAGATGAGCTTATAAGGAAGAAGATCGGAATAAGTCATTCAGGTCATTCATTTTACAAAAGCATGAAGTTCTTTGCCACAAATGAGTCTTCAAGAATGGCAGCAGTAAATAACAAATATTATGACTGTTCATGATGCGCCGCTCACGCCAGGTAATTTGTCCTCGAGTGCTTGTTTGTATTAATAATCAATGATGCAGAAAATGTGCCCAACTAATTAATGTTCTTTTCCATCGTGCTGAAACTACATAGGTAAGGAGACTGCAGCAGTCTGCAGAGGCTATCTGCTCGGAGCTTCCACATCAATATAATCAATCTTCCACCCCAAGTCGTGGTGATGGTGTATTCTATGATGAAAGTTAGGTCGTGTTATCAACTTTCTTGGAAGGGTTAGGTTTCTTTCTGATAAGGAATCAATTATGTTAGTTACTCACACGGCCTGATGTTTCTCTCAGCAGGCCAAGTGTGAAAATGAAACTAGTTAACATCTGGAACAACAAATTACAATCTCAAGGAGAGTGTACAAGTACACACGATGAGGAGTCAATAGAAGGTAAACCATTCGGCCATTCCTGCCATTTGTTCCTGTCCTGAATAAGAGCTGAAATTTTTCTAGTGCATGTTTCAGTTAATTAGCTTCATTTCTTTCACCCAATTTTTCAAGATTATCTTAAACTACATTCTTATTAATCATGAAAGCATTATAGATTACCATGTCTCGTTACATGCTTCCTGGGCCGCATAAACTCTTTCAAATCCCATCTGATCTTGTAATAGAATTGTCATGCCCCGACATTTTTTACTTACAATTTCAGAATTCGCACCAACAAAAACTCAAAAAGTTTCTTATTTCTCGGACAAAATTTCAGAAGTTGCACCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCA-TTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACGGCTACTAATTTTGGG-GAGCAGCATAATTGATGGATTGATTG--G-TGATGTTACCATTCTATTTATTTATTGTTTAT-TTTCGTAGGTGCAATTATGCTTGG</genome_strand>
        <mrna_strand>TTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGGGATTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGATAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCAATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAG.......................................................................................................GCCAAGTATGAAAATGAAACTAGCTATCATCTGGAATAACAAATTGCAAGCTCAAAGGGGAGTGTACAAGTACACACAATGGGGATTCAAAAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATGCACAAGCAAAAACTC--AAAGTTACTTAGTTCTGGGACAAAATTTGAGAATTAGCACCAAAAATGATTTTGAGATATTCTTTTTTGTTCCTTTGTCTTTATTTTCATTTTGTGTTGGGATAATAACCCGGATATGGATAGAGTGGAAAAGATTCAAAAGAATGAGGATTAATATAGCAGGCCTACTAATTTTGGGTGAGTAGCATAATTGATGGACTGATTGCTGCTGATGTTGCCATTCTATTTATTTAAAGTTTTTATTTCGTTGGTGCAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E696707" ref_strand="+" ref_description="SGN-E696707 [LH_Ea09N09](-)">
      <seq>ctctcctctagggtggatggaactcgggtaaatggattgatacgggaaatcaaggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatggagaagttttttgccacaaatgagtcttcaagaaaagcagcagtaaataccaaatattgggattgttcgtgatgtgccacttatgccagaaactacagcgataaggagagtgcagcattctgcagaagttatctgctcggagcttccacatcaatgtaatcaatcttcaccccaagttgtggtgactgtgtattgtccgatgaaaggccaagtatgaaaatgaaactagctatcatctggaataacaaattgcaagctcaaaggggagtgtacaagtacacacaatggggattcaaaagaagaatatgctcaagcaaaaactcaaagttacttagttctgggacaaaatttgagaattagcaccaaaaatgattttgagatattcttttttgttcctttgtctttattttcattttgtgttgggataataacccggatatggatagagtggaaaagattcaaaagaatgaggattaatatagcaggcctactaattttgggtgagtagcataattgatggaagtgattgctgctgatgttgccattataggtatttaaagtttttatttcgttggtgcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="93162" stop="131393"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121064" g_stop="121278" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="121279" i_stop="121367" i_length="89">
            <donor d_prob="0.929" d_score="0.94"/>
            <acceptor a_prob="0.953" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121368" g_stop="121484" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="333" r_length="117" r_score="0.957"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121485" i_stop="121587" i_length="103">
            <donor d_prob="0.292" d_score="0.98"/>
            <acceptor a_prob="0.972" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121588" g_stop="121683" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="429" r_length="96" r_score="0.948"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="121684" i_stop="130874" i_length="9191">
            <donor d_prob="0.712" d_score="0.96"/>
            <acceptor a_prob="0.445" a_score="0.80"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="130875" g_stop="131100" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="656" r_length="227" r_score="0.845"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="706" polyA_stop="722"/>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E696707" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>654</cumulative_length_of_scored_exons>
        <coverage percentage="0.906" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E696707" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121064" e_stop="121278"/>
          <exon e_start="121368" e_stop="121484"/>
          <exon e_start="121588" e_stop="121683"/>
          <exon e_start="130875" e_stop="131100"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAG-TTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGACAGAAAATGTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGTAACTCACATAACCTGATGTCTCTTTTTTCAGGCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACCATTCCCGCCATTTCCTGACCTGAACAAGAGCTGAATTTTTCTAGTGCATGTTTCAGTTAATTAGCTTCATTTCTTCTTTTTTTTGGGTAATAACTGTGAACTACTACCGTTACTCTAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTCTGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTACAGGAAAAAAAAACATAAGGTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTACTCTCTAGTTAATCTTCTCAGCAGATTCTGACACCATGCGGCTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATAGATCATTGCCCCTAATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTGAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATATGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTAGAGATACATTTATATGGGACATTGCAACATGAAATGGGTCTAAACTGACTAGCCGATTGTGACGCTCTGGTACTTTGGGAATTAAAGAGATCATTGTAGCATTATTTGCTTCAAAAGTTTTCCATTCCTAAAGAATTGCAAAACTGCCTCTGTAACATCATTGCCCACCACTTTCCAAGCCTTTTTGTAGTAATCACTTCCATATCCATCTAGACCGGGGCTCTTATTACTGCCAATGGTAAAAATGACTTTCTTGACATCATTTTTAGTATATTTCTTTATCAACTCAACCTGCTGAATGAATGTTAATGTATGACCATGTCTTTAGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTCCAATTAAATTGGAAACCTATTCACGACATCATCATGTTTTAGGAAATACTTCACTATCTAGTATTTTCTTGCACGTGTTTCGTAAGAAAATGATTGGTTCTTTTTTTTTTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAACAAATTCTTTCTATGGTTCTCCTTTTATAATCGTTTAATATAAAATTATTTTGTATCATAATTTTTTAAATATATAAATTGCTAGCAAATATTATACAGTATACATAATAATGGATTATACAAATAAAAGTAAAATCATTAATGAAATACAATTAGATAAACGTTATATAATTGAAGATTTTATTTTAAATTATACATAAATATTAACTACGATGCTCCCATAAATGTTCTATTAATGCATTACGTAGTTTAAAATGAGCTTCTTGTCCTTCATTTTTTTTATATCGAGCTAAAAATTATTGAAATTGATAATTTTCGTCTATTGTCATTTCTACAGTCGGTGCTGGACCTTTCGATACATCTTGAATTGATGCATTAAGATCACGCACATTCTCAATTGTATTATTTTTAAAAAAATTTGTATGTTTGTATTTTTAATTTTATGAGGGTAAATTGTAGTTTATATAACTAATATATAGTATATTAACACAAATTTAATTTTTTAAAAAAGTCATATAAAGAAAAATTAATTTATAAAAAGCTAAATTTTATATCTAAATTAATATTATAAAAATATTCCATTGAAAATGATTAAATATACAAAAAAATATAATTAAAACATACAATTTATATAACGTTTAATTAAAAGTTTGTGTAGTGAAATAATATTATAATATTTAAAAAGTTATTTGGTGTGAAAATTAGTGCAGGTTAGAGCTTAAAACACCAAATTTCACACTAAATAAAATAATTAGTGTAGAATTTGGTGTTGGGTTGGAGATGGTCTTAGTCTAGCTAATGTGGAACTATCAAAATTTCTACAACAGTGTAGTCCATTGACACTTACAAGTACTCATATTTCACCTCATTGAATTAACTCTAATATTTCTCGTGTGAAATCTTGCTTATGTTCTTACTTAATTGTCATGTCATGTTCTCTGACTAAACTCCCCTTCTTTTTTTTTTTTGGTTACTTTATTGTTTTAATTAACTTCGATTTATTGCCCATATGTAGCTATTTTAGTAGTTTATTGTAGAGATTCTTTATATGTGTGCTTTATGGAGTTTACATTGCAATTATATCTCGTAATGTTAGCATACAACTTTCAAATTTCTATAATTTATTTTTCACTTTTTAATACTTATGGATGCTATTATGTTTGGTGTTAATTCAATATTATTACACAAAAATCTTATTTGTATAGATATTCTTGTGACTTGGACATTTTCTTTTATAGTGCAATCTCGTTGATAATTAAATGAGATGTTAATTGATAATTAGTAATTGTATGGAGCAACTAAAGTTATGGAAGTTTTGGTCTATTATTTATTTGAATTTAAGACTAATCTTTTCATTCTTATGTCTTTTCTCATCCTCCTTCAATGTTATTATGCAAAATTTCTAATGATTTTAGAATCTCGTACTTTGTGAATTATATTTTGTTTATTTATATATTAAGATATTTTTTTGTGCCGTTATATCTACTTTTCGGTGTATTTGAGATAATTAAGAATTTATTTTAACATTTAAAATAATTGTATTGTTACTTTGCTAAGTACGAGTCATGTTGACTTTGTGGCAGTTAAATGAAAATAACATGGATATTTTCTAGTTTAAGTGAAACAAAGTAATATGAATATGTTAAAAGTTTAAAATAAGATTTTATGGTCATAAGAGATGGATGTATTTAATTTTTGCTGTTTAGGATTAAAATTTTGAATTATAAATTTTGTAATCTAAATAGATATGTGAATATTGCATCTTTCTTCTTGCGATAGAAGTTAAACTCAGCTCTGACAGCTAATTATGTTCTTCCCATCCATAGTGACTGCAAGTTTACTTTTTATTGTATTTGAAAAATGAAGTATTCGCAAACTTTTTTTTTATTGTATTTTAAGGAGGAATAAGACCAAAAAAATGAGAATTAATGACGAGAAGAATATAGTTAGGGTCAATTTGGAAAGTCACTTGGTAATTGAAATTGGTGTAATTAATTACACTTACCTGTTTGGTTGCCACATTGTAATTACACTAAAATTACACATGTCGTGTTTGAATGTCAAAATGTAATAACACATGTTCTGTTTGTATGCATAAACGCAATCACAAAATTATGATAAATTTTAAAAATAAGAATTAATTATTTAAAATTTATACTAGACAAATAAGAAACTTTATAAATGACATTAAATTAAATAGTTAAGATATATATTCTTTTTTGAAAATATATTAATGAATAAACATATTTTCCGTAACTAATATTATGAAAAAATAATTGATTTATATTTTTAAAATTAATATCTTTCAATTGAATTGATCGTAACAACTAAAAATATGAAGTTTTCACGAACATCGTGAAATGCATGTTTGATAATAAGAATAATATATAAATAAAATGTCATAAATTATTAAATGTTTGACAAAAATGTTATCTATCAAGTCTAATTAAAAAAAATATTGTGCAATGTAAATTCAATATCTACTAAACAAATGAAACTGAAAATATGGCATAGCAAAATTTTGAACATAATACTCTTATAACAAATTTCAACATAGCAATAAATATGATTTATTCTTATTTTTCTTAGTTAAGAAAACGTAAGTCTATAAATTCTATTTTAATTAAAAATTAAAATACTAATAAAATCATGCTAATGAGAATATAAACATGGCAGATAGAAATAGATAATACGAAAAAAATTACATAAATACACGTAAAGTAAAGTTGAAAATAAGAAGAAAATAAAATATATAATAATGTAAAATAATAAATAAACTTTTACAAATTTTTAGAATAATAATAATAAAAAAAATTAAAATAATAGAAGCAAAGAAAATTAAAATAAAAATTGAAATAAAAAAATTAAAAAGTAATCAAGTGGTAATTACACCATGCAATATTAGAAATTCACCGCCTCTGCGGTTGAATTATAGAGTATAATCACCTCTGTCACTGACCAAGTAATTAAATATCCTTTCAAACAGGACAAAACAATTTAATTATATCAAATCTAATTACCAATATATCCTTCCAAACAGGTCCTAAGTTTTTGTTAAAATAGGCTTACTATCACTGAACAACTTGAAAATTAACTAATTTAAGTTAGTATATGATAACAATTTTCATATTATAAATGGAATAGTTATTTTTTAATTATTATTGTTATAATCAATGAAACAGAATTTTTTAATTAAAAAATTTGAAAAATAAATAAACAAGTACTAAAATAAAATAAAATAGAATAAATATATTATTATTAACGCGTTTATTTTTCTCCGCGTGTTCAAATGCTATAAATAAGAGCTCACTGCCCACTACAGAACTTCATACGCTATACTCACCACCGTCGCAGAACCGGAAGCTACCGGAGTATAGAACTCGCCACCGTCGCAGAAGCGGAAGCTAGCGGAGTATAGAACTCACCACCGTCGCAGGACCGGAACTTCATACGCAACCGGATGAAACCCCTAAAACCGAATCAATTTTCCCGCCGTCAGCTTCCCATCATGTTCGAATTCTTGAAAAATCTGGTAACTCGATGGTACTGTAAGATTTTCTTATCCATGTTTAAAATAATCAAAGAAATCATTCTTTATTTTAAGAAATTCAATAAATCTTTTCTTTCTTAAAAAATCAAGAATTTGTTTTCACTTCTTTAAGGAGAGAGGGGATGAATGCCCGAGACTATTTCTGTCAATGGGGTTTTCTTGGATTATTGCACAAGTGTTGTTGACTAGTTCTTATAAAACAGACTTGAATTTCTGTCAGGGGTTCCTGAATAATTTAACCTGGGTTATTGATGAGTTGCTTTAAAACAGACTCAAATTTCTGTATGGGTTTTCTTGAATGATTTTAAAAAAGATGTACTAATTTACCCCTTCAAAGGTATTGAATGGAAAGTTGTGGAGTTGTTCTTGAAGCCCCATTCGCACAATTCTAGTTTAATTATAAGAAGTTAAGTATTTTTGAATGAAGACACTCAATTAGGCAAACTTCCGTAAATGTCCTCAGTGACCAATTTCCTTTACATGGTCTATAGTATAGACCTTTTGACTTCGATTGTTTCTTCAAAATGGAAAATTGTGCCAGGTAAGAGAATGGTGAATTATATGGTTCGTGTTTTCTGATTTTGTTAATGTTTTGAGGATCTGTAGAGGTGGGCTGCTGCTAAGAACATCATAGTTATGTGAGTAACGATGAAAGTTGTGCTTTCATGCAGTTTTAATCTTTTACACTATAGTTGCACCTGCAAATTTGTGTGTTGCTTGCAAAATAGGCAGTGACCAGAGAGGAGGCTCTTCATTGAATTCTTATGTTACTTCCTTTGCTACTTTGCACGATGAGAGCATATGTTTTATATGAAAATTGATATTCTCAGATGCTCCTTTTCGGTGTATCATAATTTTCTTTATACACAACCCTTAGTTCTTTTTTCAATGAGATTTACTTCCTTAGAGGACTGTCCTTTCTATTTTCTTATGCTTATAACTTGTGTACTCTTAGTTTGAACTTTAACCCAGTGTCAACTTTCCACCCGGTGTACCTGCTATATATAGATGGATGACAATGGTAAGTTTAGTTTCTTTGACATCGATTTAATGCATTTTGATGTGCAGAAAGTTCTACTCAATTTGTATTTTACTTTATCACTTCTTTTGAACGATCTGGTGTCTCATGCTGATGGGAGAAAGATATGGTAACATTTTTGGAAAATGTTAGACTCACATCATCTCTTTTTTTTAATGATGCTGCTGTACATAATTTATTTTGCGTGACAACTATGATGTTCATAACTTGGAATGGTTGTTTAGTCTATAGGATTACATGCATTACCAACTGATAGGCCGGTTGATGGTTTGTGTACATTAATATCTTTTTACAGATGTTCTTTATTTATTGTTTTGTGGTTTTACTTGTAATTGGGAGAACTGGAATGGCTGTACACAACACAAAATATTGATGCTTACATTTTGTTTCTGCTTTTATTTTAAGATCTTCATGTCCATCACTTTCCTGGTGCTCAATTTGACCTATTAAATATGCTAAAACTGTTGATGTTTGGTAGTATTGTAGGGACTCAAGAAATTTCGAGGATACTATTTTATGCATCCTTCGTTTCAAAAGTATCAACTTACCTCCTTCAGTTAAGAGTTACTGAGTTGATATCTTTTCTCTTCTTTGAAGTAATAAAAGAGAGAGATATATTAATGACATGGATCCTAGAGGAACTTGCTTCATTTGAACACTTCTTTTTGAGAATTAAAAATACTGCTTCATTTGAATACTTTAAAGCTTCTTTAACGTTATAACAGACAACAGTTCTAATAAATACAAGAAATTATTAATTAGAATGGGACGATTAAGGAAAAGCGAGAATAGGCTTTGACGAAGTGACAAAATTTTCATATTTTTCTTTAATGAGTTGAGGAAGTGGGAGCACATGTAAACATAAGATGACGTTTAGTTCTTCTTAGTTTTCGACTGCAGACCATGACTAGATCAAACTTTAGAGCTGTTGCACTTTTTAGGATTACTGGATTTTGTTTCACTGATTACTTTGTCTGATAATGTAGACTCTTTGCTATGAACTGGATTAGGATGATAATGACTTCAATGCCATGTTATTTAATTGTTAGAAGTGCTGGTCATCACCAGCTCATAATTTCTACTTTGTGTACCATATGTAGGTTAAGAGAGGAGTGATTTGAGTTATTATCTGAAAGAAGCAAAATAAAAAGAGGTGTGTGTGTGTGTGTGGGGGGGGGGGGGTTCTTGTTTGTCTATTAGAACATGTCACTTGTTCATTTTTGTTCCATGTTAGATGTGCAATCCAATTGCCAGAATATGTGCAACATTTATATCCCTAGTTGGCACCATTGATACTGCTTCTGTTAATCTGATAAAGCTATTTTGATGTGCTTTATCGGTGAGAGCAATTCACTCGACATTTTTATTCAACTCTTAGGATTCATTGTATATGACGTTATTTGTACATGTGGCTTTGTTGAAGTATCCTTCTCATCTATTGCTATCCCATTCCCTGCACCATTTTTCAGATATATTATACCTGTGAATTATGATATCAGGAAAAAGAGGTGCAGGATCCAGAGTTACAAAGCGACACTTGAACTTCTTTCCTGCAGCCAAGAAATTGATTGGAGAATGCACTGTCAGGAGTGCAATTCGATCTTCACAGATTATTCTGTGGGGAAGTGCTTCTGCAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAGATCAAAAATTCAAGTCAGTCAATACTCAAATGATTGCTCTCTTGCTCCATTGCACAATCGGTGTGAATTGGAAATCCAGAAACTCTGCACACCCCTTTCATCTAATGTTTTACCTACGGAGGATGGTTTCCTGGATAACGAATTCAGTGTTTCAGCTAGCTCCAGTTACAAATCAGACTGCCTATTAGTTCTATGACTTCCTTTTCTCTTGAGCTACTTTTGGAAAGCCTAGATAAGAATATAGTTGTTGAAGTATCCTCCTCATCTGTTGCTATCCCATTCCCTGCTCCACTTTTCAGATATACCTGTGAATTATGAGATCAGGAAAAAGAGGTGCAGGACCCAGAGTTGCAAAGTGACACTTGAACTTCGTTCCTGCAGCCAAAGAAATTGACCGGAGAGTGCACTGTCAGGAGTTAGATTCGATCTTCACGGATTATTCTGTGGGGAAGTACTTCTGAAAAGCAAGATCCTGAGTCCAGATTCCTCTGTCAGATCAAAAGTACTTCACGGATTGTTTCCACATGCTGCAAAAAGAGATCTCGATTTTATGCTTGTTCTAAAGAGGATATGAGTATTATAGGGGAAGTTGATGCTTGGGATGTTTATAGTTCAGGTCCTTCTGCATTCTATTATGATGGAGATGATTTGTCACATATACATTCTCATGGTGAAGAAAACCTTAAAAATTATTTGACACTCGAGCTATGCTCTTCTCTAGGGTGGATGGGAACTCGGGTAAATGGATTGATGCTGGAAATCGAGGTAAAACAGATGAGCTTATAAGGAAGAAGATCGGAATAAGTCATTCAGGTCATTCATTTTACAAAAGCATGAAGTTCTTTGCCACAAATGAGTCTTCAAGAATGGCAGCAGTAAATAACAAATATTATGACTGTTCATGATGCGCCGCTCACGCCAGGTAATTTGTCCTCGAGTGCTTGTTTGTATTAATAATCAATGATGCAGAAAATGTGCCCAACTAATTAATGTTCTTTTCCATCGTGCTGAAACTACATAGGTAAGGAGACTGCAGCAGTCTGCAGAGGCTATCTGCTCGGAGCTTCCACATCAATATAATCAATCTTCCACCCCAAGTCGTGGTGATGGTGTATTCTATGATGAAAGTTAGGTCGTGTTATCAACTTTCTTGGAAGGGTTAGGTTTCTTTCTGATAAGGAATCAATTATGTTAGTTACTCACACGGCCTGATGTTTCTCTCAGCAGGCCAAGTGTGAAAATGAAACTAGTTAACATCTGGAACAACAAATTACAATCTCAAGGAGAGTGTACAAGTACACACGATGAGGAGTCAATAGAAGGTAAACCATTCGGCCATTCCTGCCATTTGTTCCTGTCCTGAATAAGAGCTGAAATTTTTCTAGTGCATGTTTCAGTTAATTAGCTTCATTTCTTTCACCCAATTTTTCAAGATTATCTTAAACTACATTCTTATTAATCATGAAAGCATTATAGATTACCATGTCTCGTTACATGCTTCCTGGGCCGCATAAACTCTTTCAAATCCCATCTGATCTTGTAATAGAATTGTCATGCCCCGACATTTTTTACTTACAATTTCAGAATTCGCACCAACAAAAACTCAAAAAGTTTCTTATTTCTCGGACAAAATTTCAGAAGTTGCACCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCA-TTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACGGCTACTAATTTTGGG-GAGCAGCATAATTGATGG-ATTGATTG</genome_strand>
        <mrna_strand>CTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATACCAAATATTGGGATTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGTTATCTGCTCGGAGCTTCCACATCAATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCCGATGAAAG.......................................................................................................GCCAAGTATGAAAATGAAACTAGCTATCATCTGGAATAACAAATTGCAAGCTCAAAGGGGAGTGTACAAGTACACACAATGGGGATTCAAAAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATGCTCAAGCAAAAACTC--AAAGTTACTTAGTTCTGGGACAAAATTTGAGAATTAGCACCAAAAATGATTTTGAGATATTCTTTTTTGTTCCTTTGTCTTTATTTTCATTTTGTGTTGGGATAATAACCCGGATATGGATAGAGTGGAAAAGATTCAAAAGAATGAGGATTAATATAGCAGGCCTACTAATTTTGGGTGAGTAGCATAATTGATGGAAGTGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E394402" ref_strand="+" ref_description="SGN-E394402 [TUS-40-B20](-)">
      <seq>cagctacaagggagagtgcagcattctacagaagttatctgctcggagcttccacatctatgtaatcaatcttcaccccaagttgtggtgactgtgtattgtctgatgaaaggccaagtatgaaaatgaaactagttaacatctggaataacaaattacaagctcaaaggagagtgtacaagtacactcaatggggattcaaaagaaggttctgtgtagctggggtgttagggcatctccaatccaaacacctaattttacatcaaatttggtgttaaccaaatttactgtaatcaactccaatctactgcatcgaaaaataatttattttctctctttattattatattattattttttatttcatttatatttttttatttcataaaacaaattctttctatggttctccttttataatcgtttaatataaaattattttgtatcataattttttaaataaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="121074" stop="123410"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121374" g_stop="121484" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="0.946"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="121485" i_stop="121587" i_length="103">
            <donor d_prob="0.292" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121588" g_stop="121683" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="208" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121684" i_stop="122850" i_length="1167">
            <donor d_prob="0.712" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="122851" g_stop="123115" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="473" r_length="265" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E394402" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E394402" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121374" e_stop="121484"/>
          <exon e_start="121588" e_stop="121683"/>
          <exon e_start="122851" e_stop="123115"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGCGACAA-GGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGTAACTCACATAACCTGATGTCTCTTTTTTCAGGCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACCATTCCCGCCATTTCCTGACCTGAACAAGAGCTGAATTTTTCTAGTGCATGTTTCAGTTAATTAGCTTCATTTCTTCTTTTTTTTGGGTAATAACTGTGAACTACTACCGTTACTCTAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTCTGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTACAGGAAAAAAAAACATAAGGTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTACTCTCTAGTTAATCTTCTCAGCAGATTCTGACACCATGCGGCTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATAGATCATTGCCCCTAATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTGAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATATGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTAGAGATACATTTATATGGGACATTGCAACATGAAATGGGTCTAAACTGACTAGCCGATTGTGACGCTCTGGTACTTTGGGAATTAAAGAGATCATTGTAGCATTATTTGCTTCAAAAGTTTTCCATTCCTAAAGAATTGCAAAACTGCCTCTGTAACATCATTGCCCACCACTTTCCAAGCCTTTTTGTAGTAATCACTTCCATATCCATCTAGACCGGGGCTCTTATTACTGCCAATGGTAAAAATGACTTTCTTGACATCATTTTTAGTATATTTCTTTATCAACTCAACCTGCTGAATGAATGTTAATGTATGACCATGTCTTTAGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTCCAATTAAATTGGAAACCTATTCACGACATCATCATGTTTTAGGAAATACTTCACTATCTAGTATTTTCTTGCACGTGTTTCGTAAGAAAATGATTGGTTCTTTTTTTTTTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAACAAATTCTTTCTATGGTTCTCCTTTTATAATCGTTTAATATAAAATTATTTTGTATCATAATTTTTTAAATATATAAATTGCT</genome_strand>
        <mrna_strand>CAGCTACAAGGGAGAGTGCAGCATTCTACAGAAGTTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAG.......................................................................................................GCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAACAAATTCTTTCTATGGTTCTCCTTTTATAATCGTTTAATATAAAATTATTTTGTATCATAATTTTTTAAATAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E302982" ref_strand="+" ref_description="SGN-E302982 [cLEW-26-G13]">
      <seq>gataacgaattcagtgtttcagctagctccagttacaaatcagactgcctattagttctatgacttccttttctcttgagctacttttggaaagcctagataagaatatagttgttgaagtatcctcctcatctgttgctatcccattccctgctccacttttcagatatacctgtgaattatgagatcaggaaaaagaggtgcaggacccagagttgcaaagtgacacttgaacttcgttcctgcagccaaagaaattgaccggagagtgcactgtcaggagttagattcgatcttcacggattattctgtggggaagtacttctgaaaagcaagatcctgagtccagattcctctgtcagatcaaaagtacttcacggattgtttccacatgctgcaaaaagagatctcgattttatgcttgttctaaagaggatatgagtattataggggaagttgatgcttgggatgtttatagttcaggtccttctgcattctattatgatggagatgatttgtcacatatacattctcatggtgaagaaaaccttaaaaattatttgacactcgagctatgctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="129124" stop="130304"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129424" g_stop="130004" g_length="581"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="581" r_length="581" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E302982" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>581</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E302982" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129424" e_stop="130004"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATAACGAATTCAGTGTTTCAGCTAGCTCCAGTTACAAATCAGACTGCCTATTAGTTCTATGACTTCCTTTTCTCTTGAGCTACTTTTGGAAAGCCTAGATAAGAATATAGTTGTTGAAGTATCCTCCTCATCTGTTGCTATCCCATTCCCTGCTCCACTTTTCAGATATACCTGTGAATTATGAGATCAGGAAAAAGAGGTGCAGGACCCAGAGTTGCAAAGTGACACTTGAACTTCGTTCCTGCAGCCAAAGAAATTGACCGGAGAGTGCACTGTCAGGAGTTAGATTCGATCTTCACGGATTATTCTGTGGGGAAGTACTTCTGAAAAGCAAGATCCTGAGTCCAGATTCCTCTGTCAGATCAAAAGTACTTCACGGATTGTTTCCACATGCTGCAAAAAGAGATCTCGATTTTATGCTTGTTCTAAAGAGGATATGAGTATTATAGGGGAAGTTGATGCTTGGGATGTTTATAGTTCAGGTCCTTCTGCATTCTATTATGATGGAGATGATTTGTCACATATACATTCTCATGGTGAAGAAAACCTTAAAAATTATTTGACACTCGAGCTATGCTCT</genome_strand>
        <mrna_strand>GATAACGAATTCAGTGTTTCAGCTAGCTCCAGTTACAAATCAGACTGCCTATTAGTTCTATGACTTCCTTTTCTCTTGAGCTACTTTTGGAAAGCCTAGATAAGAATATAGTTGTTGAAGTATCCTCCTCATCTGTTGCTATCCCATTCCCTGCTCCACTTTTCAGATATACCTGTGAATTATGAGATCAGGAAAAAGAGGTGCAGGACCCAGAGTTGCAAAGTGACACTTGAACTTCGTTCCTGCAGCCAAAGAAATTGACCGGAGAGTGCACTGTCAGGAGTTAGATTCGATCTTCACGGATTATTCTGTGGGGAAGTACTTCTGAAAAGCAAGATCCTGAGTCCAGATTCCTCTGTCAGATCAAAAGTACTTCACGGATTGTTTCCACATGCTGCAAAAAGAGATCTCGATTTTATGCTTGTTCTAAAGAGGATATGAGTATTATAGGGGAAGTTGATGCTTGGGATGTTTATAGTTCAGGTCCTTCTGCATTCTATTATGATGGAGATGATTTGTCACATATACATTCTCATGGTGAAGAAAACCTTAAAAATTATTTGACACTCGAGCTATGCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E542896" ref_strand="+" ref_description="SGN-E542896 [TUS-64-G23](-)">
      <seq>atcatcatattgaaggagaatctgatctggagcacaatgcatctaaacagattcaacaaataaatgcatgcattaattcaattgatgtggacctgtaagaatttcttcaacagagtggaaaagattcaaaggaatgaggataaatataacacagctactaattttggggagcagcataattgatggattgattggagaccaactactgtttctcttgtcaacttgggtgctctgcttgagcagattgctaagttaggttcattgagtaggggttcctccaaggcatggcatgaatagcatcgtcatgaaatcaacctaaagcgttttgcagaacgactaagatcatccgtatcctagtgtctaaaaactctcgtgtggttccgtgtattttgggagttagtccaacttatgtggacctgtaagaatttcttcgacatcaacaagaaccggaggggatgaaaccgaaggctcccaatgagattcgcattctctaacatccaatggaaggagcggaaaccacactggatcatgaatcaggtgctggaatactttctgatttactgccatctgtagctattttagtagcttagtatagcgattccatacattggttttttttacggagtttacattgcaataacatttcttttcataaatgtactactgttaattgcaaaaagatgtaatctcacttattcctgaatagagatctgtatcatgtatcaattatagtactcaaaaaaaaaaaaaaaaaaggaaaaaaaaaactcgagggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="131300" stop="138927"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131600" g_stop="131668" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="131669" i_stop="132529" i_length="861">
            <donor d_prob="0.683" d_score="1.00"/>
            <acceptor a_prob="0.796" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132530" g_stop="132573" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="113" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="132574" i_stop="134553" i_length="1980">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.901" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="134554" g_stop="134634" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="194" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="134635" i_stop="134884" i_length="250">
            <donor d_prob="0.855" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="134885" g_stop="135064" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="374" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="135065" i_stop="136218" i_length="1154">
            <donor d_prob="0.876" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="136219" g_stop="136281" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="437" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="136282" i_stop="136465" i_length="184">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="136466" g_stop="136512" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="484" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="136513" i_stop="138369" i_length="1857">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="138370" g_stop="138624" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="739" r_length="255" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="740" polyA_stop="756"/>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E542896" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>739</cumulative_length_of_scored_exons>
        <coverage percentage="0.952" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E542896" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131600" e_stop="131668"/>
          <exon e_start="132530" e_stop="132573"/>
          <exon e_start="134554" e_stop="134634"/>
          <exon e_start="134885" e_stop="135064"/>
          <exon e_start="136219" e_stop="136281"/>
          <exon e_start="136466" e_stop="136512"/>
          <exon e_start="138370" e_stop="138624"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCTTCACACATAAATGAAAAATTGGATGCTGCAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATGCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATACTCCTCTTTTAGAAGGATATATTTCTGTATAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGCGGTATCAATACCAGAGTTTATATTAGTTCTGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGATTTAAGCCTTTCAAATGTCATTTGTGCGCATTGTCTCTTTATGTCCATTTTGTGTTTTAATTGGATTAATTATAAAAAGTGAATTACAAATTGTGAGTTCTATCGGAAGAGCTTTTTTGTTGTAGTACCATCAGGTACAAGATGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATCGTTCATGTTTTAGGAAATACTCCACTATCTAAAAACTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTGTTTTTTTTATAATACATGTGGTTCCGTGTATTTTAGGCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAGGTTAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTTATTTAATTAGTCTTTCTTGCTTAAACGTTGTGTCATGTTCTTTGAATTAACTCCAACATTACCTCCTTCCCCAATTAATGCCTTCCTTTAGTTTATTCTACACCTCTTTTTTTTTTTTGATGATCATACATCAACAAGAACCGAAGAAGCCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACTTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACAAATGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCGCCAAGTTAAGGTAAACAACTTAGGTGACATTTATTTACAACTTTGAAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTACATTACTTTTCTATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATTACTTAATTCATTCAAATTGAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTTATTGTCGATGATATTGACAGTTGATATGTATGTTTCTTTTGTTTAAATTCAATTTTTTTTAGAAATTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTCATTGGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACATCGATGGTCTTACCTTTCGTAGTTTTTTTAGATAAATATTAGTGTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTTTGTTGAAATGAATTTACCTTCCATCATGAATTCATGTATTATACTAATTGGCCAAATTTTTCATTAGTTTCACTTTTTTTTACAAAAAAAACCGCATCCACACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGAAGAAAAAAAGAAATTCATAGATCATTTAACTACAAGATATAGAATGGCAACACATATTAGCATTTTATAATTGATCATAATATCATTTTATAATTGATCATAATATTTCAAAGCTACTATATATTTAGAATAACTTATATTGCCAAAATATTCAAAACAAAAGTACTATTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACATTTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAATTAATCTTCCAGAGCCACTTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCTTCTTGTCCGCATTTGTAGCATCCCGCTCCTCCTCCACCGCCTCCTTGGCTACATTCCCTTGTGAAAGAAGGAAGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTATATCATTTGATTATTCGCATTCTATTACATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGATAATTAATATTTGGATCACTCTCTTGTTATTTTTTATATTTATTAAAATAAATAGTACTTTTGTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGCTGCATGCTTTGAAATATTATGATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTCTGTTCTAGATGCATCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGTTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTTTTTCATTGTTGAGGAGTTGAGGCAGACTTCATTATGTTTAAAATGAGTGGAAAATTGCATTTCAGGAAATATCTTGTTTGGAACTTCATTTGTTGGTATGCTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATATTTTCCTTTGTTTGTGTGCTTAACAGGAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGTGTGAGTATACATAAATTTATTTCTTCTTTCTACCTACCAAACAATAATTTGGCACTGCAGATATCTATTTTGCGATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCCACACACATAAATGAAAAATTGTATGCTGGAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATTCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTCGCGAAGCGTGGTAGGCCTGCGCCGGGGGAGCATACCATAGGGAGGAAAGGGAGCTCGGACGGTGGAAGAGCCAGGGGAGGCTGGGTCATTTGACGGAAATGGAAGGCTTTTCCCTATTAGAGAAGGCCCTATGGAGTAAGGGGAAGTGGATGAATTCTTGGAAAAAGAGGGAGCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATATTCCTCTTTCTGAAGGATATATGTCTGTCTAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGAGGTATCAATATCAGAGTTTATATTAGTTATGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGGTTTAAGCCTTTCCAGTGTCACTTGTGCGCATTGTCTCTTTATGTCCATTTTATGTTTTAATTGGGTTAATTATAAAAAGTGAATTACGAATTGTGACTTCTATCAGAAGAGCTTTTTTGTTGTAATACCATTAGTTACAAAACGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATTATTCATGTTTTAGGAAATACTCCACTATCTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTTTTTTTGATAATACAGGTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACATGTAAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTGGTTTAATTTGTCTTTCTTGCTTAAATGTTGTGTCATATTCTTTGAATTAACTCCCCCGGTTTAACATTATCTCCTTCCCTAATTAATGCCTTACTTTAGTTTATTCTACCCCTCTCATTTTTATTTTTTTTGATTATACATCAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACGTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACACACGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCACCAAGTTAAGGTAAACTACTTAGGTGACATTTGTTTACAACTTTGAAAACAGACTTTTCTAACTTAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTAATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATAACTTCATTCATTCAAATTAAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTGATTTTCGATGATATTGACAGTTGATATATGTATGTTTCTTTTGTTTATAAAATTAGAAGTTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTTATTTGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACAATCATGGTCTTACCTTTCTCAGTTTTTTAGATAAATATTAGTTTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTCTGTTGAAATGAATCTACCTTCCCTCATGAATTCATTTATTATACTAATTGGCCAAATTTTCCATTAGTTTCACTTTTTTACAAAAATACCGCATCCCCACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGGATAAAAAAGAAATTCATAGATCATTTAACTACAAGATATGGAATGGCAACACACATTAACATTTTATAATTGATCATAATATTTCAAAGCTACTATAGATTTAGAGTAACTCATATTGCCAAGATATTCAAAACAAAAGTACTACTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACAATTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAGTTAATCTTTCAGAGCCACCTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCCTCTTCGCCGCATTTGTAGCATCCCGCTATTCCTCCACCGCCTCCCTGGCTACATTCCCTTGCGAAAGAAGGAGGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTGGAGATTAATATTTCTTCTTTGACCAAAAAAAGAAAATTAATTTGATTTTTCGCATTGTATTAAATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGACAATTAATATTTGGATCACTCTCTTGTTATTTCTCTTATTTATTAAAATAAATAGTACTTTTCTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGTTGCATGCTTTGAAATGTTATAATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTATGTTCTAGATGCAAGGTATCTTGTAGTTAAATGATATATGAATTTCTTTTTTTTCTTCAACAAGAAAGAAGAGTATGTATTTGAGAGTGGTTTATGCGGGGATGTTTTTTTTTTTTTTTATAACTTAAAGTGAAATGGATGAAGTTGGTTGACATAGCATGCCCTCTATGGAATCCTCAGCATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCAC</genome_strand>
        <mrna_strand>ATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTG..........................................................................................................................................................................................................................................................GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT........................................................................................................................................................................................CAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E392899" ref_strand="+" ref_description="SGN-E392899 [TUS-37-A5](-)">
      <seq>aggagaatttgatttgggccacaatgcatctaaacaggttcaacaaataaatgcaggcattaattcaattgatgtggacctgttagaatttcttcaacaggagaccaactactgtttcttttgtcaacttgggtgctctgcttgagcagattgctaagttaggttcattgagtaggggttcctccaaggcatggcatgaatagcatcgtcatgaaatcaacctaaagcgttttgcagaacgactaagatcatccgtatcctagtgtctaaaaactctcgtgtggttccgtgtattttgggagttagtccaacttatgtggacctgtaagaatttcttcgacataaccggaggggatgaaaccgaaggctcccaatgagattcgcattctctaacatccaatggaaggagcggaaaccacactggatcatgaatcaggtgctggaatactttttgatttactgccatctgtagctattttagtagcttagtatagcgattccatacattggttttttttacggagtttacattgcaataacatttcttttcataaatgtactactgttaattgcaaaaagatgtaatctcacttattcctgaatagagatctgtatcatgtatcaattatagtactcacatactctgttcctctaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="104758" stop="138940"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131613" g_stop="131668" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="0.893"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="131669" i_stop="132529" i_length="861">
            <donor d_prob="0.683" d_score="0.88"/>
            <acceptor a_prob="0.796" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132530" g_stop="132573" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="100" r_length="44" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="132574" i_stop="134884" i_length="2311">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="134885" g_stop="135064" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="280" r_length="180" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="135065" i_stop="136218" i_length="1154">
            <donor d_prob="0.876" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="136219" g_stop="136281" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="343" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="136282" i_stop="136472" i_length="191">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="136473" g_stop="136512" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="383" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="136513" i_stop="138369" i_length="1857">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="138370" g_stop="138640" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="654" r_length="271" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E392899" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>654</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E392899" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131613" e_stop="131668"/>
          <exon e_start="132530" e_stop="132573"/>
          <exon e_start="134885" e_stop="135064"/>
          <exon e_start="136219" e_stop="136281"/>
          <exon e_start="136473" e_stop="136512"/>
          <exon e_start="138370" e_stop="138640"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCTTCACACATAAATGAAAAATTGGATGCTGCAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATGCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATACTCCTCTTTTAGAAGGATATATTTCTGTATAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGCGGTATCAATACCAGAGTTTATATTAGTTCTGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGATTTAAGCCTTTCAAATGTCATTTGTGCGCATTGTCTCTTTATGTCCATTTTGTGTTTTAATTGGATTAATTATAAAAAGTGAATTACAAATTGTGAGTTCTATCGGAAGAGCTTTTTTGTTGTAGTACCATCAGGTACAAGATGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATCGTTCATGTTTTAGGAAATACTCCACTATCTAAAAACTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTGTTTTTTTTATAATACATGTGGTTCCGTGTATTTTAGGCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAGGTTAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTTATTTAATTAGTCTTTCTTGCTTAAACGTTGTGTCATGTTCTTTGAATTAACTCCAACATTACCTCCTTCCCCAATTAATGCCTTCCTTTAGTTTATTCTACACCTCTTTTTTTTTTTTGATGATCATACATCAACAAGAACCGAAGAAGCCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACTTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACAAATGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCGCCAAGTTAAGGTAAACAACTTAGGTGACATTTATTTACAACTTTGAAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTACATTACTTTTCTATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATTACTTAATTCATTCAAATTGAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTTATTGTCGATGATATTGACAGTTGATATGTATGTTTCTTTTGTTTAAATTCAATTTTTTTTAGAAATTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTCATTGGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACATCGATGGTCTTACCTTTCGTAGTTTTTTTAGATAAATATTAGTGTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTTTGTTGAAATGAATTTACCTTCCATCATGAATTCATGTATTATACTAATTGGCCAAATTTTTCATTAGTTTCACTTTTTTTTACAAAAAAAACCGCATCCACACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGAAGAAAAAAAGAAATTCATAGATCATTTAACTACAAGATATAGAATGGCAACACATATTAGCATTTTATAATTGATCATAATATCATTTTATAATTGATCATAATATTTCAAAGCTACTATATATTTAGAATAACTTATATTGCCAAAATATTCAAAACAAAAGTACTATTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACATTTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAATTAATCTTCCAGAGCCACTTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCTTCTTGTCCGCATTTGTAGCATCCCGCTCCTCCTCCACCGCCTCCTTGGCTACATTCCCTTGTGAAAGAAGGAAGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTATATCATTTGATTATTCGCATTCTATTACATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGATAATTAATATTTGGATCACTCTCTTGTTATTTTTTATATTTATTAAAATAAATAGTACTTTTGTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGCTGCATGCTTTGAAATATTATGATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTCTGTTCTAGATGCATCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGTTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTTTTTCATTGTTGAGGAGTTGAGGCAGACTTCATTATGTTTAAAATGAGTGGAAAATTGCATTTCAGGAAATATCTTGTTTGGAACTTCATTTGTTGGTATGCTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATATTTTCCTTTGTTTGTGTGCTTAACAGGAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGTGTGAGTATACATAAATTTATTTCTTCTTTCTACCTACCAAACAATAATTTGGCACTGCAGATATCTATTTTGCGATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCCACACACATAAATGAAAAATTGTATGCTGGAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATTCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTCGCGAAGCGTGGTAGGCCTGCGCCGGGGGAGCATACCATAGGGAGGAAAGGGAGCTCGGACGGTGGAAGAGCCAGGGGAGGCTGGGTCATTTGACGGAAATGGAAGGCTTTTCCCTATTAGAGAAGGCCCTATGGAGTAAGGGGAAGTGGATGAATTCTTGGAAAAAGAGGGAGCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATATTCCTCTTTCTGAAGGATATATGTCTGTCTAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGAGGTATCAATATCAGAGTTTATATTAGTTATGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGGTTTAAGCCTTTCCAGTGTCACTTGTGCGCATTGTCTCTTTATGTCCATTTTATGTTTTAATTGGGTTAATTATAAAAAGTGAATTACGAATTGTGACTTCTATCAGAAGAGCTTTTTTGTTGTAATACCATTAGTTACAAAACGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATTATTCATGTTTTAGGAAATACTCCACTATCTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTTTTTTTGATAATACAGGTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACATGTAAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTGGTTTAATTTGTCTTTCTTGCTTAAATGTTGTGTCATATTCTTTGAATTAACTCCCCCGGTTTAACATTATCTCCTTCCCTAATTAATGCCTTACTTTAGTTTATTCTACCCCTCTCATTTTTATTTTTTTTGATTATACATCAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACGTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACACACGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCACCAAGTTAAGGTAAACTACTTAGGTGACATTTGTTTACAACTTTGAAAACAGACTTTTCTAACTTAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTAATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATAACTTCATTCATTCAAATTAAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTGATTTTCGATGATATTGACAGTTGATATATGTATGTTTCTTTTGTTTATAAAATTAGAAGTTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTTATTTGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACAATCATGGTCTTACCTTTCTCAGTTTTTTAGATAAATATTAGTTTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTCTGTTGAAATGAATCTACCTTCCCTCATGAATTCATTTATTATACTAATTGGCCAAATTTTCCATTAGTTTCACTTTTTTACAAAAATACCGCATCCCCACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGGATAAAAAAGAAATTCATAGATCATTTAACTACAAGATATGGAATGGCAACACACATTAACATTTTATAATTGATCATAATATTTCAAAGCTACTATAGATTTAGAGTAACTCATATTGCCAAGATATTCAAAACAAAAGTACTACTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACAATTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAGTTAATCTTTCAGAGCCACCTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCCTCTTCGCCGCATTTGTAGCATCCCGCTATTCCTCCACCGCCTCCCTGGCTACATTCCCTTGCGAAAGAAGGAGGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTGGAGATTAATATTTCTTCTTTGACCAAAAAAAGAAAATTAATTTGATTTTTCGCATTGTATTAAATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGACAATTAATATTTGGATCACTCTCTTGTTATTTCTCTTATTTATTAAAATAAATAGTACTTTTCTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGTTGCATGCTTTGAAATGTTATAATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTATGTTCTAGATGCAAGGTATCTTGTAGTTAAATGATATATGAATTTCTTTTTTTTCTTCAACAAGAAAGAAGAGTATGTATTTGAGAGTGGTTTATGCGGGGATGTTTTTTTTTTTTTTTATAACTTAAAGTGAAATGGATGAAGTTGGTTGACATAGCATGCCCTCTATGGAATCCTCAGCATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTCTGTTCCTCTA</genome_strand>
        <mrna_strand>AGGAGAATTTGATTTGGGCCACAATGCATCTAAACAGGTTCAACAAATAAATGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAATTCAATTGATGTGGACCTGTTAGAATTTCTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACCAACTACTGTTTCTTTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT...............................................................................................................................................................................................AACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTTTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTCTGTTCCTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E392900" ref_strand="+" ref_description="SGN-E392900 [TUS-37-A5]">
      <seq>aggagaatctgatctggagcacaatgcatctaaacagattcaacaaataaatgcatgcattaattcaattgatgtggacctgtaagaatttcttcaacaggagaccaactactgtttctcttgtcaacttgggtgctctgcttgagcagattgctaagttaggttcattgagtaggggttcctccaaggcatggcatgaatagcatcgtcatgaaatcaacctaaagcgttttgcagaacgactaagatcatccgtatcctagtgtctaaaaactctcgtgtggttccgtgtattttgggagttagtccaacttatgtggacctgtaagaatttcttcgacataaccggaggggatgaaaccgaaggctcccaatgagattcgcattctctaacatccaatggaaggagcggaaaccacactggatcatgaatcaggtgctggaatactttctgatttactgccatctgtagctattttagtagcttagtatagcgattccatacattggttttttttacggagtttacatttgcaataacatttcttttcctaaatgtactactgttaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="131313" stop="138856"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131613" g_stop="131668" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="131669" i_stop="132529" i_length="861">
            <donor d_prob="0.683" d_score="1.00"/>
            <acceptor a_prob="0.796" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132530" g_stop="132573" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="100" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="132574" i_stop="134884" i_length="2311">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="134885" g_stop="135064" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="280" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="135065" i_stop="136218" i_length="1154">
            <donor d_prob="0.876" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="136219" g_stop="136281" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="343" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="136282" i_stop="136472" i_length="191">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="136473" g_stop="136512" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="383" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="136513" i_stop="138369" i_length="1857">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="138370" g_stop="138556" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="571" r_length="188" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E392900" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E392900" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131613" e_stop="131668"/>
          <exon e_start="132530" e_stop="132573"/>
          <exon e_start="134885" e_stop="135064"/>
          <exon e_start="136219" e_stop="136281"/>
          <exon e_start="136473" e_stop="136512"/>
          <exon e_start="138370" e_stop="138556"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCTTCACACATAAATGAAAAATTGGATGCTGCAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATGCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATACTCCTCTTTTAGAAGGATATATTTCTGTATAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGCGGTATCAATACCAGAGTTTATATTAGTTCTGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGATTTAAGCCTTTCAAATGTCATTTGTGCGCATTGTCTCTTTATGTCCATTTTGTGTTTTAATTGGATTAATTATAAAAAGTGAATTACAAATTGTGAGTTCTATCGGAAGAGCTTTTTTGTTGTAGTACCATCAGGTACAAGATGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATCGTTCATGTTTTAGGAAATACTCCACTATCTAAAAACTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTGTTTTTTTTATAATACATGTGGTTCCGTGTATTTTAGGCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAGGTTAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTTATTTAATTAGTCTTTCTTGCTTAAACGTTGTGTCATGTTCTTTGAATTAACTCCAACATTACCTCCTTCCCCAATTAATGCCTTCCTTTAGTTTATTCTACACCTCTTTTTTTTTTTTGATGATCATACATCAACAAGAACCGAAGAAGCCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACTTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACAAATGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCGCCAAGTTAAGGTAAACAACTTAGGTGACATTTATTTACAACTTTGAAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTACATTACTTTTCTATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATTACTTAATTCATTCAAATTGAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTTATTGTCGATGATATTGACAGTTGATATGTATGTTTCTTTTGTTTAAATTCAATTTTTTTTAGAAATTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTCATTGGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACATCGATGGTCTTACCTTTCGTAGTTTTTTTAGATAAATATTAGTGTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTTTGTTGAAATGAATTTACCTTCCATCATGAATTCATGTATTATACTAATTGGCCAAATTTTTCATTAGTTTCACTTTTTTTTACAAAAAAAACCGCATCCACACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGAAGAAAAAAAGAAATTCATAGATCATTTAACTACAAGATATAGAATGGCAACACATATTAGCATTTTATAATTGATCATAATATCATTTTATAATTGATCATAATATTTCAAAGCTACTATATATTTAGAATAACTTATATTGCCAAAATATTCAAAACAAAAGTACTATTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACATTTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAATTAATCTTCCAGAGCCACTTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCTTCTTGTCCGCATTTGTAGCATCCCGCTCCTCCTCCACCGCCTCCTTGGCTACATTCCCTTGTGAAAGAAGGAAGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTATATCATTTGATTATTCGCATTCTATTACATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGATAATTAATATTTGGATCACTCTCTTGTTATTTTTTATATTTATTAAAATAAATAGTACTTTTGTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGCTGCATGCTTTGAAATATTATGATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTCTGTTCTAGATGCATCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGTTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTTTTTCATTGTTGAGGAGTTGAGGCAGACTTCATTATGTTTAAAATGAGTGGAAAATTGCATTTCAGGAAATATCTTGTTTGGAACTTCATTTGTTGGTATGCTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATATTTTCCTTTGTTTGTGTGCTTAACAGGAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGTGTGAGTATACATAAATTTATTTCTTCTTTCTACCTACCAAACAATAATTTGGCACTGCAGATATCTATTTTGCGATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCCACACACATAAATGAAAAATTGTATGCTGGAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATTCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTCGCGAAGCGTGGTAGGCCTGCGCCGGGGGAGCATACCATAGGGAGGAAAGGGAGCTCGGACGGTGGAAGAGCCAGGGGAGGCTGGGTCATTTGACGGAAATGGAAGGCTTTTCCCTATTAGAGAAGGCCCTATGGAGTAAGGGGAAGTGGATGAATTCTTGGAAAAAGAGGGAGCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATATTCCTCTTTCTGAAGGATATATGTCTGTCTAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGAGGTATCAATATCAGAGTTTATATTAGTTATGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGGTTTAAGCCTTTCCAGTGTCACTTGTGCGCATTGTCTCTTTATGTCCATTTTATGTTTTAATTGGGTTAATTATAAAAAGTGAATTACGAATTGTGACTTCTATCAGAAGAGCTTTTTTGTTGTAATACCATTAGTTACAAAACGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATTATTCATGTTTTAGGAAATACTCCACTATCTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTTTTTTTGATAATACAGGTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACATGTAAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTGGTTTAATTTGTCTTTCTTGCTTAAATGTTGTGTCATATTCTTTGAATTAACTCCCCCGGTTTAACATTATCTCCTTCCCTAATTAATGCCTTACTTTAGTTTATTCTACCCCTCTCATTTTTATTTTTTTTGATTATACATCAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACGTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACACACGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCACCAAGTTAAGGTAAACTACTTAGGTGACATTTGTTTACAACTTTGAAAACAGACTTTTCTAACTTAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTAATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATAACTTCATTCATTCAAATTAAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTGATTTTCGATGATATTGACAGTTGATATATGTATGTTTCTTTTGTTTATAAAATTAGAAGTTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTTATTTGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACAATCATGGTCTTACCTTTCTCAGTTTTTTAGATAAATATTAGTTTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTCTGTTGAAATGAATCTACCTTCCCTCATGAATTCATTTATTATACTAATTGGCCAAATTTTCCATTAGTTTCACTTTTTTACAAAAATACCGCATCCCCACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGGATAAAAAAGAAATTCATAGATCATTTAACTACAAGATATGGAATGGCAACACACATTAACATTTTATAATTGATCATAATATTTCAAAGCTACTATAGATTTAGAGTAACTCATATTGCCAAGATATTCAAAACAAAAGTACTACTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACAATTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAGTTAATCTTTCAGAGCCACCTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCCTCTTCGCCGCATTTGTAGCATCCCGCTATTCCTCCACCGCCTCCCTGGCTACATTCCCTTGCGAAAGAAGGAGGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTGGAGATTAATATTTCTTCTTTGACCAAAAAAAGAAAATTAATTTGATTTTTCGCATTGTATTAAATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGACAATTAATATTTGGATCACTCTCTTGTTATTTCTCTTATTTATTAAAATAAATAGTACTTTTCTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGTTGCATGCTTTGAAATGTTATAATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTATGTTCTAGATGCAAGGTATCTTGTAGTTAAATGATATATGAATTTCTTTTTTTTCTTCAACAAGAAAGAAGAGTATGTATTTGAGAGTGGTTTATGCGGGGATGTTTTTTTTTTTTTTTATAACTTAAAGTGAAATGGATGAAGTTGGTTGACATAGCATGCCCTCTATGGAATCCTCAGCATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACA-TTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAAT</genome_strand>
        <mrna_strand>AGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT...............................................................................................................................................................................................AACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTTGCAATAACATTTCTTTTCCTAAATGTACTACTGTTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E242538" ref_strand="+" ref_description="SGN-E242538 [cLED-30-B21]">
      <seq>ggagaatctgatctggagcacaatgcatctaaacagattcaacaaataaatgcatgcattaattcaattgatgtggacctgtaagaatttcttcaacaggagaccaactactgtttctcttgtcaacttgggtgctctgcttgagcagattgctaagttaggttcattgagtaggggttcctccaaggcatggcatgaatagcatcgtcatgaaatcaacctaaagcgttttgcagaacgactaagatcatccgtatcctagtgtctaaaaactctcgtgtggttccgtgtattttgggagttagtccaacttatgtggacctgtaagaatttcttcgacataaccggaggggatgaaaccgaaggctcccaatgagattcgcattctctaacatccaatggaaggagcggaaaccacactggatcatgaatcaggtgctggaatactttctgatttactgccatctgtagctattttagtagcttagtatagcgattccatacattggttttttttacggagtttacattgcaataacatttcttttcataaatgtactactgttaattgcaaaaagatgtaatctcacttattcctgaatagagatctgtatcatgtatcaattatagtactcacatactctgttcctctaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="131314" stop="138940"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131614" g_stop="131668" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="131669" i_stop="132529" i_length="861">
            <donor d_prob="0.683" d_score="1.00"/>
            <acceptor a_prob="0.796" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132530" g_stop="132573" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="99" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="132574" i_stop="134884" i_length="2311">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="134885" g_stop="135064" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="279" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="135065" i_stop="136218" i_length="1154">
            <donor d_prob="0.876" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="136219" g_stop="136281" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="342" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="136282" i_stop="136472" i_length="191">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="136473" g_stop="136512" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="382" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="136513" i_stop="138369" i_length="1857">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="138370" g_stop="138640" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="653" r_length="271" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E242538" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E242538" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131614" e_stop="131668"/>
          <exon e_start="132530" e_stop="132573"/>
          <exon e_start="134885" e_stop="135064"/>
          <exon e_start="136219" e_stop="136281"/>
          <exon e_start="136473" e_stop="136512"/>
          <exon e_start="138370" e_stop="138640"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCTTCACACATAAATGAAAAATTGGATGCTGCAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATGCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATACTCCTCTTTTAGAAGGATATATTTCTGTATAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGCGGTATCAATACCAGAGTTTATATTAGTTCTGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGATTTAAGCCTTTCAAATGTCATTTGTGCGCATTGTCTCTTTATGTCCATTTTGTGTTTTAATTGGATTAATTATAAAAAGTGAATTACAAATTGTGAGTTCTATCGGAAGAGCTTTTTTGTTGTAGTACCATCAGGTACAAGATGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATCGTTCATGTTTTAGGAAATACTCCACTATCTAAAAACTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTGTTTTTTTTATAATACATGTGGTTCCGTGTATTTTAGGCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAGGTTAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTTATTTAATTAGTCTTTCTTGCTTAAACGTTGTGTCATGTTCTTTGAATTAACTCCAACATTACCTCCTTCCCCAATTAATGCCTTCCTTTAGTTTATTCTACACCTCTTTTTTTTTTTTGATGATCATACATCAACAAGAACCGAAGAAGCCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACTTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACAAATGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCGCCAAGTTAAGGTAAACAACTTAGGTGACATTTATTTACAACTTTGAAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTACATTACTTTTCTATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATTACTTAATTCATTCAAATTGAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTTATTGTCGATGATATTGACAGTTGATATGTATGTTTCTTTTGTTTAAATTCAATTTTTTTTAGAAATTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTCATTGGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACATCGATGGTCTTACCTTTCGTAGTTTTTTTAGATAAATATTAGTGTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTTTGTTGAAATGAATTTACCTTCCATCATGAATTCATGTATTATACTAATTGGCCAAATTTTTCATTAGTTTCACTTTTTTTTACAAAAAAAACCGCATCCACACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGAAGAAAAAAAGAAATTCATAGATCATTTAACTACAAGATATAGAATGGCAACACATATTAGCATTTTATAATTGATCATAATATCATTTTATAATTGATCATAATATTTCAAAGCTACTATATATTTAGAATAACTTATATTGCCAAAATATTCAAAACAAAAGTACTATTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACATTTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAATTAATCTTCCAGAGCCACTTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCTTCTTGTCCGCATTTGTAGCATCCCGCTCCTCCTCCACCGCCTCCTTGGCTACATTCCCTTGTGAAAGAAGGAAGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTATATCATTTGATTATTCGCATTCTATTACATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGATAATTAATATTTGGATCACTCTCTTGTTATTTTTTATATTTATTAAAATAAATAGTACTTTTGTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGCTGCATGCTTTGAAATATTATGATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTCTGTTCTAGATGCATCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGTTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTTTTTCATTGTTGAGGAGTTGAGGCAGACTTCATTATGTTTAAAATGAGTGGAAAATTGCATTTCAGGAAATATCTTGTTTGGAACTTCATTTGTTGGTATGCTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATATTTTCCTTTGTTTGTGTGCTTAACAGGAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGTGTGAGTATACATAAATTTATTTCTTCTTTCTACCTACCAAACAATAATTTGGCACTGCAGATATCTATTTTGCGATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCCACACACATAAATGAAAAATTGTATGCTGGAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATTCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTCGCGAAGCGTGGTAGGCCTGCGCCGGGGGAGCATACCATAGGGAGGAAAGGGAGCTCGGACGGTGGAAGAGCCAGGGGAGGCTGGGTCATTTGACGGAAATGGAAGGCTTTTCCCTATTAGAGAAGGCCCTATGGAGTAAGGGGAAGTGGATGAATTCTTGGAAAAAGAGGGAGCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATATTCCTCTTTCTGAAGGATATATGTCTGTCTAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGAGGTATCAATATCAGAGTTTATATTAGTTATGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGGTTTAAGCCTTTCCAGTGTCACTTGTGCGCATTGTCTCTTTATGTCCATTTTATGTTTTAATTGGGTTAATTATAAAAAGTGAATTACGAATTGTGACTTCTATCAGAAGAGCTTTTTTGTTGTAATACCATTAGTTACAAAACGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATTATTCATGTTTTAGGAAATACTCCACTATCTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTTTTTTTGATAATACAGGTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACATGTAAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTGGTTTAATTTGTCTTTCTTGCTTAAATGTTGTGTCATATTCTTTGAATTAACTCCCCCGGTTTAACATTATCTCCTTCCCTAATTAATGCCTTACTTTAGTTTATTCTACCCCTCTCATTTTTATTTTTTTTGATTATACATCAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACGTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACACACGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCACCAAGTTAAGGTAAACTACTTAGGTGACATTTGTTTACAACTTTGAAAACAGACTTTTCTAACTTAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTAATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATAACTTCATTCATTCAAATTAAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTGATTTTCGATGATATTGACAGTTGATATATGTATGTTTCTTTTGTTTATAAAATTAGAAGTTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTTATTTGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACAATCATGGTCTTACCTTTCTCAGTTTTTTAGATAAATATTAGTTTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTCTGTTGAAATGAATCTACCTTCCCTCATGAATTCATTTATTATACTAATTGGCCAAATTTTCCATTAGTTTCACTTTTTTACAAAAATACCGCATCCCCACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGGATAAAAAAGAAATTCATAGATCATTTAACTACAAGATATGGAATGGCAACACACATTAACATTTTATAATTGATCATAATATTTCAAAGCTACTATAGATTTAGAGTAACTCATATTGCCAAGATATTCAAAACAAAAGTACTACTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACAATTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAGTTAATCTTTCAGAGCCACCTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCCTCTTCGCCGCATTTGTAGCATCCCGCTATTCCTCCACCGCCTCCCTGGCTACATTCCCTTGCGAAAGAAGGAGGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTGGAGATTAATATTTCTTCTTTGACCAAAAAAAGAAAATTAATTTGATTTTTCGCATTGTATTAAATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGACAATTAATATTTGGATCACTCTCTTGTTATTTCTCTTATTTATTAAAATAAATAGTACTTTTCTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGTTGCATGCTTTGAAATGTTATAATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTATGTTCTAGATGCAAGGTATCTTGTAGTTAAATGATATATGAATTTCTTTTTTTTCTTCAACAAGAAAGAAGAGTATGTATTTGAGAGTGGTTTATGCGGGGATGTTTTTTTTTTTTTTTATAACTTAAAGTGAAATGGATGAAGTTGGTTGACATAGCATGCCCTCTATGGAATCCTCAGCATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTCTGTTCCTCTA</genome_strand>
        <mrna_strand>GGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT...............................................................................................................................................................................................AACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTCTGTTCCTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E368180" ref_strand="+" ref_description="SGN-E368180 [TUS-22-M22]">
      <seq>ggagaatctgatctggagcacaatgcatctaaacagattcaacaaataaatgcatgcattaattcaattgatgtggacctgtaagaatttcttcaacaggagaccaactactgtttctcttgtcaacttgggtgctctgcttgagcagattgctaagttaggttcattgagtaggggttcctccaaggcatggcatgaatagcatcgtcatgaaatcaacctaaagcgttttgcagaacgactaagatcatccgtatcctagtgtctaaaaactctcgtgtggttccgtgtattttgggagttagtccaacttatgtggacctgtaagaatttcttcgacataaccggaggggatgaaaccgaaggctcccaatgagattcgcattctctaacatccaatggaaggagcggaaaccacactggatcatgaatcaggtgctggaatactttctgatttactgccatctgtagctattttagtagcttagtatagcgattccatacattggttttttttacggagtttacattgcaataacatttcttttcataaatgtactactgttaattgcaaaaagatgtaatctcacttattcctgaatagagatctgtatcatgtatcaattatagtactcacatactttgttccttttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="131314" stop="138939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131614" g_stop="131668" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="131669" i_stop="132529" i_length="861">
            <donor d_prob="0.683" d_score="1.00"/>
            <acceptor a_prob="0.796" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132530" g_stop="132573" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="99" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="132574" i_stop="134884" i_length="2311">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="134885" g_stop="135064" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="279" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="135065" i_stop="136218" i_length="1154">
            <donor d_prob="0.876" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="136219" g_stop="136281" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="342" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="136282" i_stop="136472" i_length="191">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="136473" g_stop="136512" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="382" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="136513" i_stop="138369" i_length="1857">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="138370" g_stop="138637" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="650" r_length="268" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E368180" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>650</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E368180" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131614" e_stop="131668"/>
          <exon e_start="132530" e_stop="132573"/>
          <exon e_start="134885" e_stop="135064"/>
          <exon e_start="136219" e_stop="136281"/>
          <exon e_start="136473" e_stop="136512"/>
          <exon e_start="138370" e_stop="138637"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCTTCACACATAAATGAAAAATTGGATGCTGCAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATGCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATACTCCTCTTTTAGAAGGATATATTTCTGTATAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGCGGTATCAATACCAGAGTTTATATTAGTTCTGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGATTTAAGCCTTTCAAATGTCATTTGTGCGCATTGTCTCTTTATGTCCATTTTGTGTTTTAATTGGATTAATTATAAAAAGTGAATTACAAATTGTGAGTTCTATCGGAAGAGCTTTTTTGTTGTAGTACCATCAGGTACAAGATGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATCGTTCATGTTTTAGGAAATACTCCACTATCTAAAAACTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTGTTTTTTTTATAATACATGTGGTTCCGTGTATTTTAGGCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAGGTTAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTTATTTAATTAGTCTTTCTTGCTTAAACGTTGTGTCATGTTCTTTGAATTAACTCCAACATTACCTCCTTCCCCAATTAATGCCTTCCTTTAGTTTATTCTACACCTCTTTTTTTTTTTTGATGATCATACATCAACAAGAACCGAAGAAGCCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACTTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACAAATGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCGCCAAGTTAAGGTAAACAACTTAGGTGACATTTATTTACAACTTTGAAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTACATTACTTTTCTATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATTACTTAATTCATTCAAATTGAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTTATTGTCGATGATATTGACAGTTGATATGTATGTTTCTTTTGTTTAAATTCAATTTTTTTTAGAAATTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTCATTGGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACATCGATGGTCTTACCTTTCGTAGTTTTTTTAGATAAATATTAGTGTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTTTGTTGAAATGAATTTACCTTCCATCATGAATTCATGTATTATACTAATTGGCCAAATTTTTCATTAGTTTCACTTTTTTTTACAAAAAAAACCGCATCCACACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGAAGAAAAAAAGAAATTCATAGATCATTTAACTACAAGATATAGAATGGCAACACATATTAGCATTTTATAATTGATCATAATATCATTTTATAATTGATCATAATATTTCAAAGCTACTATATATTTAGAATAACTTATATTGCCAAAATATTCAAAACAAAAGTACTATTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACATTTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAATTAATCTTCCAGAGCCACTTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCTTCTTGTCCGCATTTGTAGCATCCCGCTCCTCCTCCACCGCCTCCTTGGCTACATTCCCTTGTGAAAGAAGGAAGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTATATCATTTGATTATTCGCATTCTATTACATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGATAATTAATATTTGGATCACTCTCTTGTTATTTTTTATATTTATTAAAATAAATAGTACTTTTGTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGCTGCATGCTTTGAAATATTATGATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTCTGTTCTAGATGCATCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGTTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTTTTTCATTGTTGAGGAGTTGAGGCAGACTTCATTATGTTTAAAATGAGTGGAAAATTGCATTTCAGGAAATATCTTGTTTGGAACTTCATTTGTTGGTATGCTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATATTTTCCTTTGTTTGTGTGCTTAACAGGAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGTGTGAGTATACATAAATTTATTTCTTCTTTCTACCTACCAAACAATAATTTGGCACTGCAGATATCTATTTTGCGATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCCACACACATAAATGAAAAATTGTATGCTGGAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATTCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTCGCGAAGCGTGGTAGGCCTGCGCCGGGGGAGCATACCATAGGGAGGAAAGGGAGCTCGGACGGTGGAAGAGCCAGGGGAGGCTGGGTCATTTGACGGAAATGGAAGGCTTTTCCCTATTAGAGAAGGCCCTATGGAGTAAGGGGAAGTGGATGAATTCTTGGAAAAAGAGGGAGCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATATTCCTCTTTCTGAAGGATATATGTCTGTCTAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGAGGTATCAATATCAGAGTTTATATTAGTTATGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGGTTTAAGCCTTTCCAGTGTCACTTGTGCGCATTGTCTCTTTATGTCCATTTTATGTTTTAATTGGGTTAATTATAAAAAGTGAATTACGAATTGTGACTTCTATCAGAAGAGCTTTTTTGTTGTAATACCATTAGTTACAAAACGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATTATTCATGTTTTAGGAAATACTCCACTATCTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTTTTTTTGATAATACAGGTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACATGTAAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTGGTTTAATTTGTCTTTCTTGCTTAAATGTTGTGTCATATTCTTTGAATTAACTCCCCCGGTTTAACATTATCTCCTTCCCTAATTAATGCCTTACTTTAGTTTATTCTACCCCTCTCATTTTTATTTTTTTTGATTATACATCAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACGTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACACACGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCACCAAGTTAAGGTAAACTACTTAGGTGACATTTGTTTACAACTTTGAAAACAGACTTTTCTAACTTAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTAATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATAACTTCATTCATTCAAATTAAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTGATTTTCGATGATATTGACAGTTGATATATGTATGTTTCTTTTGTTTATAAAATTAGAAGTTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTTATTTGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACAATCATGGTCTTACCTTTCTCAGTTTTTTAGATAAATATTAGTTTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTCTGTTGAAATGAATCTACCTTCCCTCATGAATTCATTTATTATACTAATTGGCCAAATTTTCCATTAGTTTCACTTTTTTACAAAAATACCGCATCCCCACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGGATAAAAAAGAAATTCATAGATCATTTAACTACAAGATATGGAATGGCAACACACATTAACATTTTATAATTGATCATAATATTTCAAAGCTACTATAGATTTAGAGTAACTCATATTGCCAAGATATTCAAAACAAAAGTACTACTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACAATTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAGTTAATCTTTCAGAGCCACCTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCCTCTTCGCCGCATTTGTAGCATCCCGCTATTCCTCCACCGCCTCCCTGGCTACATTCCCTTGCGAAAGAAGGAGGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTGGAGATTAATATTTCTTCTTTGACCAAAAAAAGAAAATTAATTTGATTTTTCGCATTGTATTAAATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGACAATTAATATTTGGATCACTCTCTTGTTATTTCTCTTATTTATTAAAATAAATAGTACTTTTCTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGTTGCATGCTTTGAAATGTTATAATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTATGTTCTAGATGCAAGGTATCTTGTAGTTAAATGATATATGAATTTCTTTTTTTTCTTCAACAAGAAAGAAGAGTATGTATTTGAGAGTGGTTTATGCGGGGATGTTTTTTTTTTTTTTTATAACTTAAAGTGAAATGGATGAAGTTGGTTGACATAGCATGCCCTCTATGGAATCCTCAGCATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTCTGTTCCT</genome_strand>
        <mrna_strand>GGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT...............................................................................................................................................................................................AACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTTTGTTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E242932" ref_strand="+" ref_description="SGN-E242932 [cLED-31-F17]">
      <seq>ggagaatctgatctggagcacaatgcatctaaacagattcaacaaataaatgcatgcattaattcaattgatgtggacctgtaagaatttcttcaacaggagaccaactactgtttctcttgtcaacttgggtgctctgcttgagcagattgctaagttaggttcattgagtaggggttcctccaaggcatggcatgaatagcatcgtcatgaaatcaacctaaagcgttttgcagaacgactaagatcatccgtatcctagtgtctaaaaactctcgtgtggttccgtgtattttgggagttagtccaacttatgtggacctgtaagaatttcttcgacataaccggaggggatgaaaccgaaggctcccaatgagattcgcattctctaacatccaatggaaggagcggaaaccacactggatcatgaatcaggtgctggaatactttctgatttactgccatctgtagctattttagtagcttagtatagcgattccatacattggttttttttacggagtttacattgcaataacatttcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="131314" stop="138834"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131614" g_stop="131668" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="131669" i_stop="132529" i_length="861">
            <donor d_prob="0.683" d_score="1.00"/>
            <acceptor a_prob="0.796" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132530" g_stop="132573" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="99" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="132574" i_stop="134884" i_length="2311">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="134885" g_stop="135064" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="279" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="135065" i_stop="136218" i_length="1154">
            <donor d_prob="0.876" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="136219" g_stop="136281" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="342" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="136282" i_stop="136472" i_length="191">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="136473" g_stop="136512" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="382" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="136513" i_stop="138369" i_length="1857">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="138370" g_stop="138534" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="547" r_length="165" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E242932" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E242932" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131614" e_stop="131668"/>
          <exon e_start="132530" e_stop="132573"/>
          <exon e_start="134885" e_stop="135064"/>
          <exon e_start="136219" e_stop="136281"/>
          <exon e_start="136473" e_stop="136512"/>
          <exon e_start="138370" e_stop="138534"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCTTCACACATAAATGAAAAATTGGATGCTGCAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATGCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATACTCCTCTTTTAGAAGGATATATTTCTGTATAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGCGGTATCAATACCAGAGTTTATATTAGTTCTGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGATTTAAGCCTTTCAAATGTCATTTGTGCGCATTGTCTCTTTATGTCCATTTTGTGTTTTAATTGGATTAATTATAAAAAGTGAATTACAAATTGTGAGTTCTATCGGAAGAGCTTTTTTGTTGTAGTACCATCAGGTACAAGATGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATCGTTCATGTTTTAGGAAATACTCCACTATCTAAAAACTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTGTTTTTTTTATAATACATGTGGTTCCGTGTATTTTAGGCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAGGTTAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTTATTTAATTAGTCTTTCTTGCTTAAACGTTGTGTCATGTTCTTTGAATTAACTCCAACATTACCTCCTTCCCCAATTAATGCCTTCCTTTAGTTTATTCTACACCTCTTTTTTTTTTTTGATGATCATACATCAACAAGAACCGAAGAAGCCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACTTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACAAATGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCGCCAAGTTAAGGTAAACAACTTAGGTGACATTTATTTACAACTTTGAAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTACATTACTTTTCTATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATTACTTAATTCATTCAAATTGAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTTATTGTCGATGATATTGACAGTTGATATGTATGTTTCTTTTGTTTAAATTCAATTTTTTTTAGAAATTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTCATTGGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACATCGATGGTCTTACCTTTCGTAGTTTTTTTAGATAAATATTAGTGTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTTTGTTGAAATGAATTTACCTTCCATCATGAATTCATGTATTATACTAATTGGCCAAATTTTTCATTAGTTTCACTTTTTTTTACAAAAAAAACCGCATCCACACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGAAGAAAAAAAGAAATTCATAGATCATTTAACTACAAGATATAGAATGGCAACACATATTAGCATTTTATAATTGATCATAATATCATTTTATAATTGATCATAATATTTCAAAGCTACTATATATTTAGAATAACTTATATTGCCAAAATATTCAAAACAAAAGTACTATTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACATTTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAATTAATCTTCCAGAGCCACTTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCTTCTTGTCCGCATTTGTAGCATCCCGCTCCTCCTCCACCGCCTCCTTGGCTACATTCCCTTGTGAAAGAAGGAAGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTATATCATTTGATTATTCGCATTCTATTACATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGATAATTAATATTTGGATCACTCTCTTGTTATTTTTTATATTTATTAAAATAAATAGTACTTTTGTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGCTGCATGCTTTGAAATATTATGATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTCTGTTCTAGATGCATCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGTTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTTTTTCATTGTTGAGGAGTTGAGGCAGACTTCATTATGTTTAAAATGAGTGGAAAATTGCATTTCAGGAAATATCTTGTTTGGAACTTCATTTGTTGGTATGCTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATATTTTCCTTTGTTTGTGTGCTTAACAGGAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGTGTGAGTATACATAAATTTATTTCTTCTTTCTACCTACCAAACAATAATTTGGCACTGCAGATATCTATTTTGCGATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCCACACACATAAATGAAAAATTGTATGCTGGAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATTCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTCGCGAAGCGTGGTAGGCCTGCGCCGGGGGAGCATACCATAGGGAGGAAAGGGAGCTCGGACGGTGGAAGAGCCAGGGGAGGCTGGGTCATTTGACGGAAATGGAAGGCTTTTCCCTATTAGAGAAGGCCCTATGGAGTAAGGGGAAGTGGATGAATTCTTGGAAAAAGAGGGAGCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATATTCCTCTTTCTGAAGGATATATGTCTGTCTAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGAGGTATCAATATCAGAGTTTATATTAGTTATGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGGTTTAAGCCTTTCCAGTGTCACTTGTGCGCATTGTCTCTTTATGTCCATTTTATGTTTTAATTGGGTTAATTATAAAAAGTGAATTACGAATTGTGACTTCTATCAGAAGAGCTTTTTTGTTGTAATACCATTAGTTACAAAACGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATTATTCATGTTTTAGGAAATACTCCACTATCTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTTTTTTTGATAATACAGGTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACATGTAAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTGGTTTAATTTGTCTTTCTTGCTTAAATGTTGTGTCATATTCTTTGAATTAACTCCCCCGGTTTAACATTATCTCCTTCCCTAATTAATGCCTTACTTTAGTTTATTCTACCCCTCTCATTTTTATTTTTTTTGATTATACATCAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACGTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACACACGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCACCAAGTTAAGGTAAACTACTTAGGTGACATTTGTTTACAACTTTGAAAACAGACTTTTCTAACTTAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTAATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATAACTTCATTCATTCAAATTAAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTGATTTTCGATGATATTGACAGTTGATATATGTATGTTTCTTTTGTTTATAAAATTAGAAGTTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTTATTTGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACAATCATGGTCTTACCTTTCTCAGTTTTTTAGATAAATATTAGTTTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTCTGTTGAAATGAATCTACCTTCCCTCATGAATTCATTTATTATACTAATTGGCCAAATTTTCCATTAGTTTCACTTTTTTACAAAAATACCGCATCCCCACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGGATAAAAAAGAAATTCATAGATCATTTAACTACAAGATATGGAATGGCAACACACATTAACATTTTATAATTGATCATAATATTTCAAAGCTACTATAGATTTAGAGTAACTCATATTGCCAAGATATTCAAAACAAAAGTACTACTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACAATTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAGTTAATCTTTCAGAGCCACCTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCCTCTTCGCCGCATTTGTAGCATCCCGCTATTCCTCCACCGCCTCCCTGGCTACATTCCCTTGCGAAAGAAGGAGGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTGGAGATTAATATTTCTTCTTTGACCAAAAAAAGAAAATTAATTTGATTTTTCGCATTGTATTAAATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGACAATTAATATTTGGATCACTCTCTTGTTATTTCTCTTATTTATTAAAATAAATAGTACTTTTCTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGTTGCATGCTTTGAAATGTTATAATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTATGTTCTAGATGCAAGGTATCTTGTAGTTAAATGATATATGAATTTCTTTTTTTTCTTCAACAAGAAAGAAGAGTATGTATTTGAGAGTGGTTTATGCGGGGATGTTTTTTTTTTTTTTTATAACTTAAAGTGAAATGGATGAAGTTGGTTGACATAGCATGCCCTCTATGGAATCCTCAGCATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTT</genome_strand>
        <mrna_strand>GGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT...............................................................................................................................................................................................AACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E244714" ref_strand="+" ref_description="SGN-E244714 [cLED-38-O6]">
      <seq>ggagaatctgatctggagcacaatgcatctaaacagattcaacaaataaatgcatgcattaattcaattgatgtggacctgtaagaatttcttcaacaggagaccaactactgtttctcttgtcaacttgggtgctctgcttgagcagattgctaagttaggttcattgagtaggggttcctccaaggcatggcatgaatagcatcgtcatgaaatcaacctaaagcgttttgcagaacgactaagatcatccgtatcctagtgtctaaaaactctcgtgtggttccgtgtattttgggagttagtccaacttatgtggacctgtaagaatttcttcgacataaccggaggggatgaaaccgaaggctcccaatgagattcgcattctctaacatccaatggaaggagcggaaaccacactggatcatgaatcacgtgctggaatactctctgatttactgccatctgtagctattttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="131314" stop="138767"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131614" g_stop="131668" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="131669" i_stop="132529" i_length="861">
            <donor d_prob="0.683" d_score="1.00"/>
            <acceptor a_prob="0.796" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132530" g_stop="132573" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="99" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="132574" i_stop="134884" i_length="2311">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="134885" g_stop="135064" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="279" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="135065" i_stop="136218" i_length="1154">
            <donor d_prob="0.876" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="136219" g_stop="136281" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="342" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="136282" i_stop="136472" i_length="191">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="136473" g_stop="136512" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="382" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="136513" i_stop="138369" i_length="1857">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="138370" g_stop="138467" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="480" r_length="98" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E244714" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E244714" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131614" e_stop="131668"/>
          <exon e_start="132530" e_stop="132573"/>
          <exon e_start="134885" e_stop="135064"/>
          <exon e_start="136219" e_stop="136281"/>
          <exon e_start="136473" e_stop="136512"/>
          <exon e_start="138370" e_stop="138467"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCTTCACACATAAATGAAAAATTGGATGCTGCAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATGCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATACTCCTCTTTTAGAAGGATATATTTCTGTATAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGCGGTATCAATACCAGAGTTTATATTAGTTCTGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGATTTAAGCCTTTCAAATGTCATTTGTGCGCATTGTCTCTTTATGTCCATTTTGTGTTTTAATTGGATTAATTATAAAAAGTGAATTACAAATTGTGAGTTCTATCGGAAGAGCTTTTTTGTTGTAGTACCATCAGGTACAAGATGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATCGTTCATGTTTTAGGAAATACTCCACTATCTAAAAACTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTGTTTTTTTTATAATACATGTGGTTCCGTGTATTTTAGGCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAGGTTAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTTATTTAATTAGTCTTTCTTGCTTAAACGTTGTGTCATGTTCTTTGAATTAACTCCAACATTACCTCCTTCCCCAATTAATGCCTTCCTTTAGTTTATTCTACACCTCTTTTTTTTTTTTGATGATCATACATCAACAAGAACCGAAGAAGCCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACTTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACAAATGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCGCCAAGTTAAGGTAAACAACTTAGGTGACATTTATTTACAACTTTGAAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTACATTACTTTTCTATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATTACTTAATTCATTCAAATTGAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTTATTGTCGATGATATTGACAGTTGATATGTATGTTTCTTTTGTTTAAATTCAATTTTTTTTAGAAATTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTCATTGGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACATCGATGGTCTTACCTTTCGTAGTTTTTTTAGATAAATATTAGTGTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTTTGTTGAAATGAATTTACCTTCCATCATGAATTCATGTATTATACTAATTGGCCAAATTTTTCATTAGTTTCACTTTTTTTTACAAAAAAAACCGCATCCACACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGAAGAAAAAAAGAAATTCATAGATCATTTAACTACAAGATATAGAATGGCAACACATATTAGCATTTTATAATTGATCATAATATCATTTTATAATTGATCATAATATTTCAAAGCTACTATATATTTAGAATAACTTATATTGCCAAAATATTCAAAACAAAAGTACTATTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACATTTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAATTAATCTTCCAGAGCCACTTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCTTCTTGTCCGCATTTGTAGCATCCCGCTCCTCCTCCACCGCCTCCTTGGCTACATTCCCTTGTGAAAGAAGGAAGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTATATCATTTGATTATTCGCATTCTATTACATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGATAATTAATATTTGGATCACTCTCTTGTTATTTTTTATATTTATTAAAATAAATAGTACTTTTGTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGCTGCATGCTTTGAAATATTATGATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTCTGTTCTAGATGCATCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGTTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTTTTTCATTGTTGAGGAGTTGAGGCAGACTTCATTATGTTTAAAATGAGTGGAAAATTGCATTTCAGGAAATATCTTGTTTGGAACTTCATTTGTTGGTATGCTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATATTTTCCTTTGTTTGTGTGCTTAACAGGAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGTGTGAGTATACATAAATTTATTTCTTCTTTCTACCTACCAAACAATAATTTGGCACTGCAGATATCTATTTTGCGATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCCACACACATAAATGAAAAATTGTATGCTGGAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATTCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTCGCGAAGCGTGGTAGGCCTGCGCCGGGGGAGCATACCATAGGGAGGAAAGGGAGCTCGGACGGTGGAAGAGCCAGGGGAGGCTGGGTCATTTGACGGAAATGGAAGGCTTTTCCCTATTAGAGAAGGCCCTATGGAGTAAGGGGAAGTGGATGAATTCTTGGAAAAAGAGGGAGCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATATTCCTCTTTCTGAAGGATATATGTCTGTCTAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGAGGTATCAATATCAGAGTTTATATTAGTTATGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGGTTTAAGCCTTTCCAGTGTCACTTGTGCGCATTGTCTCTTTATGTCCATTTTATGTTTTAATTGGGTTAATTATAAAAAGTGAATTACGAATTGTGACTTCTATCAGAAGAGCTTTTTTGTTGTAATACCATTAGTTACAAAACGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATTATTCATGTTTTAGGAAATACTCCACTATCTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTTTTTTTGATAATACAGGTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACATGTAAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTGGTTTAATTTGTCTTTCTTGCTTAAATGTTGTGTCATATTCTTTGAATTAACTCCCCCGGTTTAACATTATCTCCTTCCCTAATTAATGCCTTACTTTAGTTTATTCTACCCCTCTCATTTTTATTTTTTTTGATTATACATCAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACGTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACACACGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCACCAAGTTAAGGTAAACTACTTAGGTGACATTTGTTTACAACTTTGAAAACAGACTTTTCTAACTTAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTAATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATAACTTCATTCATTCAAATTAAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTGATTTTCGATGATATTGACAGTTGATATATGTATGTTTCTTTTGTTTATAAAATTAGAAGTTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTTATTTGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACAATCATGGTCTTACCTTTCTCAGTTTTTTAGATAAATATTAGTTTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTCTGTTGAAATGAATCTACCTTCCCTCATGAATTCATTTATTATACTAATTGGCCAAATTTTCCATTAGTTTCACTTTTTTACAAAAATACCGCATCCCCACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGGATAAAAAAGAAATTCATAGATCATTTAACTACAAGATATGGAATGGCAACACACATTAACATTTTATAATTGATCATAATATTTCAAAGCTACTATAGATTTAGAGTAACTCATATTGCCAAGATATTCAAAACAAAAGTACTACTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACAATTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAGTTAATCTTTCAGAGCCACCTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCCTCTTCGCCGCATTTGTAGCATCCCGCTATTCCTCCACCGCCTCCCTGGCTACATTCCCTTGCGAAAGAAGGAGGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTGGAGATTAATATTTCTTCTTTGACCAAAAAAAGAAAATTAATTTGATTTTTCGCATTGTATTAAATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGACAATTAATATTTGGATCACTCTCTTGTTATTTCTCTTATTTATTAAAATAAATAGTACTTTTCTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGTTGCATGCTTTGAAATGTTATAATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTATGTTCTAGATGCAAGGTATCTTGTAGTTAAATGATATATGAATTTCTTTTTTTTCTTCAACAAGAAAGAAGAGTATGTATTTGAGAGTGGTTTATGCGGGGATGTTTTTTTTTTTTTTTATAACTTAAAGTGAAATGGATGAAGTTGGTTGACATAGCATGCCCTCTATGGAATCCTCAGCATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAG</genome_strand>
        <mrna_strand>GGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT...............................................................................................................................................................................................AACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCACGTGCTGGAATACTCTCTGATTTACTGCCATCTGTAGCTATTTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E240191" ref_strand="+" ref_description="SGN-E240191 [cLED-25-O21]">
      <seq>ggagaatctgatctggagcacaatgcatctaaacagattcaacaaataaatgcatgcattaattcaattgatgtggacctgtaagaatttcttcaacaggagaccaactactgtttctcttgtcaacttgggtgctctgcttgagcagattgctaagttaggttcattgagtaggggttcctccaaggcatggcatgaatagcatcgtcatgaaatcaacctaaagcgttttgcagaacgactaagatcatccgtatcctagtgtctaaaaactctcgtgtggttccgtgtattttgggagttagtccaacttatgtggacctgtaagaatttcttcgacataaccggaggggatgaaaccgaaggctcccaatgagattcgcattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="131314" stop="136812"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131614" g_stop="131668" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="131669" i_stop="132529" i_length="861">
            <donor d_prob="0.683" d_score="1.00"/>
            <acceptor a_prob="0.796" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132530" g_stop="132573" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="99" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="132574" i_stop="134884" i_length="2311">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="134885" g_stop="135064" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="279" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="135065" i_stop="136218" i_length="1154">
            <donor d_prob="0.876" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="136219" g_stop="136281" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="342" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="136282" i_stop="136472" i_length="191">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="136473" g_stop="136512" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="382" r_length="40" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E240191" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>382</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E240191" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131614" e_stop="131668"/>
          <exon e_start="132530" e_stop="132573"/>
          <exon e_start="134885" e_stop="135064"/>
          <exon e_start="136219" e_stop="136281"/>
          <exon e_start="136473" e_stop="136512"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCTTCACACATAAATGAAAAATTGGATGCTGCAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATGCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATACTCCTCTTTTAGAAGGATATATTTCTGTATAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGCGGTATCAATACCAGAGTTTATATTAGTTCTGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGATTTAAGCCTTTCAAATGTCATTTGTGCGCATTGTCTCTTTATGTCCATTTTGTGTTTTAATTGGATTAATTATAAAAAGTGAATTACAAATTGTGAGTTCTATCGGAAGAGCTTTTTTGTTGTAGTACCATCAGGTACAAGATGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATCGTTCATGTTTTAGGAAATACTCCACTATCTAAAAACTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTGTTTTTTTTATAATACATGTGGTTCCGTGTATTTTAGGCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAGGTTAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTTATTTAATTAGTCTTTCTTGCTTAAACGTTGTGTCATGTTCTTTGAATTAACTCCAACATTACCTCCTTCCCCAATTAATGCCTTCCTTTAGTTTATTCTACACCTCTTTTTTTTTTTTGATGATCATACATCAACAAGAACCGAAGAAGCCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACTTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACAAATGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCGCCAAGTTAAGGTAAACAACTTAGGTGACATTTATTTACAACTTTGAAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTACATTACTTTTCTATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATTACTTAATTCATTCAAATTGAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTTATTGTCGATGATATTGACAGTTGATATGTATGTTTCTTTTGTTTAAATTCAATTTTTTTTAGAAATTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTCATTGGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACATCGATGGTCTTACCTTTCGTAGTTTTTTTAGATAAATATTAGTGTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTTTGTTGAAATGAATTTACCTTCCATCATGAATTCATGTATTATACTAATTGGCCAAATTTTTCATTAGTTTCACTTTTTTTTACAAAAAAAACCGCATCCACACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGAAGAAAAAAAGAAATTCATAGATCATTTAACTACAAGATATAGAATGGCAACACATATTAGCATTTTATAATTGATCATAATATCATTTTATAATTGATCATAATATTTCAAAGCTACTATATATTTAGAATAACTTATATTGCCAAAATATTCAAAACAAAAGTACTATTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACATTTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAATTAATCTTCCAGAGCCACTTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCTTCTTGTCCGCATTTGTAGCATCCCGCTCCTCCTCCACCGCCTCCTTGGCTACATTCCCTTGTGAAAGAAGGAAGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTATATCATTTGATTATTCGCATTCTATTACATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGATAATTAATATTTGGATCACTCTCTTGTTATTTTTTATATTTATTAAAATAAATAGTACTTTTGTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGCTGCATGCTTTGAAATATTATGATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTCTGTTCTAGATGCATCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGTTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTTTTTCATTGTTGAGGAGTTGAGGCAGACTTCATTATGTTTAAAATGAGTGGAAAATTGCATTTCAGGAAATATCTTGTTTGGAACTTCATTTGTTGGTATGCTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATATTTTCCTTTGTTTGTGTGCTTAACAGGAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGTGTGAGTATACATAAATTTATTTCTTCTTTCTACCTACCAAACAATAATTTGGCACTGCAGATATCTATTTTGCGATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCCACACACATAAATGAAAAATTGTATGCTGGAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATTCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTCGCGAAGCGTGGTAGGCCTGCGCCGGGGGAGCATACCATAGGGAGGAAAGGGAGCTCGGACGGTGGAAGAGCCAGGGGAGGCTGGGTCATTTGACGGAAATGGAAGGCTTTTCCCTATTAGAGAAGGCCCTATGGAGTAAGGGGAAGTGGATGAATTCTTGGAAAAAGAGGGAGCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATATTCCTCTTTCTGAAGGATATATGTCTGTCTAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGAGGTATCAATATCAGAGTTTATATTAGTTATGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGGTTTAAGCCTTTCCAGTGTCACTTGTGCGCATTGTCTCTTTATGTCCATTTTATGTTTTAATTGGGTTAATTATAAAAAGTGAATTACGAATTGTGACTTCTATCAGAAGAGCTTTTTTGTTGTAATACCATTAGTTACAAAACGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATTATTCATGTTTTAGGAAATACTCCACTATCTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTTTTTTTGATAATACAGGTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACATGTAAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTGGTTTAATTTGTCTTTCTTGCTTAAATGTTGTGTCATATTCTTTGAATTAACTCCCCCGGTTTAACATTATCTCCTTCCCTAATTAATGCCTTACTTTAGTTTATTCTACCCCTCTCATTTTTATTTTTTTTGATTATACATCAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG</genome_strand>
        <mrna_strand>GGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT...............................................................................................................................................................................................AACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E368179" ref_strand="+" ref_description="SGN-E368179 [TUS-22-M22](-)">
      <seq>gatctggagcacaatgcatctaaacagattcaacaaataaatgcatgcattaattcaattgatgtggacctgtaagaatttcttcaacaggagaccaactactgtttctcttgtcaacttgggtgctctgcttgagcagattgctaagttaggttcattgagtaggggttcctccaaggcatggcatgaatagcatcgtcatgaaatcaacctaaagcgttttgcagaacgactaagatcatccgtatcctagtgtctaaaaactctcgtgtggttccgtgtattttgggagttagtccaacttatgtggacctgtaagaatttcttcgacataaccggaggggatgaaaccgaaggctcccaatgagattcgcattctctaacatccaatggaaggagcggaaaccacactggatcatgaatcaggtgctggaatactttctgatttactgccatctgtagctattttagtagcttagtatagcgattccatacattggttttttttacggagtttacattgcaataacatttcttttcataaatgtactactgttaattgcaaaaagatgtaatctcacttattcctgaatagagatctgtatcatgtatcaattatagtactcacatactctgttcctctaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="104768" stop="138940"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131623" g_stop="131668" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="131669" i_stop="132529" i_length="861">
            <donor d_prob="0.683" d_score="1.00"/>
            <acceptor a_prob="0.796" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132530" g_stop="132573" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="90" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="132574" i_stop="134884" i_length="2311">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="134885" g_stop="135064" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="270" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="135065" i_stop="136218" i_length="1154">
            <donor d_prob="0.876" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="136219" g_stop="136281" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="333" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="136282" i_stop="136472" i_length="191">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="136473" g_stop="136512" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="373" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="136513" i_stop="138369" i_length="1857">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="138370" g_stop="138640" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="644" r_length="271" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-E368179" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>644</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E368179" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131623" e_stop="131668"/>
          <exon e_start="132530" e_stop="132573"/>
          <exon e_start="134885" e_stop="135064"/>
          <exon e_start="136219" e_stop="136281"/>
          <exon e_start="136473" e_stop="136512"/>
          <exon e_start="138370" e_stop="138640"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCTTCACACATAAATGAAAAATTGGATGCTGCAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATGCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATACTCCTCTTTTAGAAGGATATATTTCTGTATAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGCGGTATCAATACCAGAGTTTATATTAGTTCTGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGATTTAAGCCTTTCAAATGTCATTTGTGCGCATTGTCTCTTTATGTCCATTTTGTGTTTTAATTGGATTAATTATAAAAAGTGAATTACAAATTGTGAGTTCTATCGGAAGAGCTTTTTTGTTGTAGTACCATCAGGTACAAGATGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATCGTTCATGTTTTAGGAAATACTCCACTATCTAAAAACTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTGTTTTTTTTATAATACATGTGGTTCCGTGTATTTTAGGCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAGGTTAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTTATTTAATTAGTCTTTCTTGCTTAAACGTTGTGTCATGTTCTTTGAATTAACTCCAACATTACCTCCTTCCCCAATTAATGCCTTCCTTTAGTTTATTCTACACCTCTTTTTTTTTTTTGATGATCATACATCAACAAGAACCGAAGAAGCCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACTTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACAAATGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCGCCAAGTTAAGGTAAACAACTTAGGTGACATTTATTTACAACTTTGAAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTACATTACTTTTCTATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATTACTTAATTCATTCAAATTGAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTTATTGTCGATGATATTGACAGTTGATATGTATGTTTCTTTTGTTTAAATTCAATTTTTTTTAGAAATTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTCATTGGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACATCGATGGTCTTACCTTTCGTAGTTTTTTTAGATAAATATTAGTGTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTTTGTTGAAATGAATTTACCTTCCATCATGAATTCATGTATTATACTAATTGGCCAAATTTTTCATTAGTTTCACTTTTTTTTACAAAAAAAACCGCATCCACACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGAAGAAAAAAAGAAATTCATAGATCATTTAACTACAAGATATAGAATGGCAACACATATTAGCATTTTATAATTGATCATAATATCATTTTATAATTGATCATAATATTTCAAAGCTACTATATATTTAGAATAACTTATATTGCCAAAATATTCAAAACAAAAGTACTATTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACATTTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAATTAATCTTCCAGAGCCACTTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCTTCTTGTCCGCATTTGTAGCATCCCGCTCCTCCTCCACCGCCTCCTTGGCTACATTCCCTTGTGAAAGAAGGAAGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTATATCATTTGATTATTCGCATTCTATTACATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGATAATTAATATTTGGATCACTCTCTTGTTATTTTTTATATTTATTAAAATAAATAGTACTTTTGTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGCTGCATGCTTTGAAATATTATGATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTCTGTTCTAGATGCATCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGTTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTTTTTCATTGTTGAGGAGTTGAGGCAGACTTCATTATGTTTAAAATGAGTGGAAAATTGCATTTCAGGAAATATCTTGTTTGGAACTTCATTTGTTGGTATGCTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATATTTTCCTTTGTTTGTGTGCTTAACAGGAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGTGTGAGTATACATAAATTTATTTCTTCTTTCTACCTACCAAACAATAATTTGGCACTGCAGATATCTATTTTGCGATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCCACACACATAAATGAAAAATTGTATGCTGGAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATTCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTCGCGAAGCGTGGTAGGCCTGCGCCGGGGGAGCATACCATAGGGAGGAAAGGGAGCTCGGACGGTGGAAGAGCCAGGGGAGGCTGGGTCATTTGACGGAAATGGAAGGCTTTTCCCTATTAGAGAAGGCCCTATGGAGTAAGGGGAAGTGGATGAATTCTTGGAAAAAGAGGGAGCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATATTCCTCTTTCTGAAGGATATATGTCTGTCTAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGAGGTATCAATATCAGAGTTTATATTAGTTATGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGGTTTAAGCCTTTCCAGTGTCACTTGTGCGCATTGTCTCTTTATGTCCATTTTATGTTTTAATTGGGTTAATTATAAAAAGTGAATTACGAATTGTGACTTCTATCAGAAGAGCTTTTTTGTTGTAATACCATTAGTTACAAAACGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATTATTCATGTTTTAGGAAATACTCCACTATCTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTTTTTTTGATAATACAGGTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACATGTAAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTGGTTTAATTTGTCTTTCTTGCTTAAATGTTGTGTCATATTCTTTGAATTAACTCCCCCGGTTTAACATTATCTCCTTCCCTAATTAATGCCTTACTTTAGTTTATTCTACCCCTCTCATTTTTATTTTTTTTGATTATACATCAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACGTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACACACGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCACCAAGTTAAGGTAAACTACTTAGGTGACATTTGTTTACAACTTTGAAAACAGACTTTTCTAACTTAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTAATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATAACTTCATTCATTCAAATTAAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTGATTTTCGATGATATTGACAGTTGATATATGTATGTTTCTTTTGTTTATAAAATTAGAAGTTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTTATTTGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACAATCATGGTCTTACCTTTCTCAGTTTTTTAGATAAATATTAGTTTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTCTGTTGAAATGAATCTACCTTCCCTCATGAATTCATTTATTATACTAATTGGCCAAATTTTCCATTAGTTTCACTTTTTTACAAAAATACCGCATCCCCACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGGATAAAAAAGAAATTCATAGATCATTTAACTACAAGATATGGAATGGCAACACACATTAACATTTTATAATTGATCATAATATTTCAAAGCTACTATAGATTTAGAGTAACTCATATTGCCAAGATATTCAAAACAAAAGTACTACTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACAATTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAGTTAATCTTTCAGAGCCACCTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCCTCTTCGCCGCATTTGTAGCATCCCGCTATTCCTCCACCGCCTCCCTGGCTACATTCCCTTGCGAAAGAAGGAGGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTGGAGATTAATATTTCTTCTTTGACCAAAAAAAGAAAATTAATTTGATTTTTCGCATTGTATTAAATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGACAATTAATATTTGGATCACTCTCTTGTTATTTCTCTTATTTATTAAAATAAATAGTACTTTTCTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGTTGCATGCTTTGAAATGTTATAATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTATGTTCTAGATGCAAGGTATCTTGTAGTTAAATGATATATGAATTTCTTTTTTTTCTTCAACAAGAAAGAAGAGTATGTATTTGAGAGTGGTTTATGCGGGGATGTTTTTTTTTTTTTTTATAACTTAAAGTGAAATGGATGAAGTTGGTTGACATAGCATGCCCTCTATGGAATCCTCAGCATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTCTGTTCCTCTA</genome_strand>
        <mrna_strand>GATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT...............................................................................................................................................................................................AACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTCTGTTCCTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>83</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="4521" PGL_stop="3304"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="4521" e_stop="4419"/>
            <exon e_start="4349" e_stop="4254"/>
            <exon e_start="4178" e_stop="4073"/>
            <exon e_start="3982" e_stop="3528"/>
            <exon e_start="3316" e_stop="3304"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.869" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.859" e_score="0.993"/>
          <exon-only e_score="0.538"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="4521" e_stop="4419" e_length="103"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="1.000">
            <gDNA_intron_boundary i_start="4418" i_stop="4350" i_length="69"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="4349" e_stop="4254" e_length="96"/>
          </exon>
          <intron i_serial="2" don_prob="0.869" acc_prob="0.997">
            <gDNA_intron_boundary i_start="4253" i_stop="4179" i_length="75"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="4178" e_stop="4073" e_length="106"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.995">
            <gDNA_intron_boundary i_start="4072" i_stop="3983" i_length="90"/>
          </intron>
          <exon e_serial="4" e_score="0.993">
            <gDNA_exon_boundary e_start="3982" e_stop="3528" e_length="455"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.859">
            <gDNA_intron_boundary i_start="3527" i_stop="3317" i_length="211"/>
          </intron>
          <exon e_serial="5" e_score="0.538">
            <gDNA_exon_boundary e_start="3316" e_stop="3304" e_length="13"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4521" stop="4419"/>
              <exon start="4349" stop="4254"/>
              <exon start="4178" stop="4073"/>
              <exon start="3982" stop="3528"/>
              <exon start="3316" stop="3304"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734085" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTGCACGGAGAAGTATGCAGAAATTTACTACAACAGGCCTGATGTGCAGAAAGCTATGCACGCGAATACAACAAGAATTCCTTATAAATGGACAGCCTGCAG : TGAGACATTGAATCGAAACTGGAATGATACAGATGACTCGATTCTCCCAATCTACCAGGAACTAATTGCTGCTGGATTGAGAATTTGGGTTTTCAG : TGGTGATGTAGACTCAGTTGTACCCGTTACCGCGACAAGGTATTCCCTAGCACAGCTCAAGTTATCTACCACAACTCCATGGTATCCTTGGTATGTCAAAAAACAG : GTTGGGGGCTGGACAGAGGTATACAAAGGTCTAACATTTGCAACAGTGAGAGGGGCAGGTCATGAAGTGCCATTATTCAAGCCAAGGGCAGCTTATCAACTATTTAGATCATTTTTAAAAGGAGAGCCACTTCCAAAGTCATGATTGTTGTGACATTATAAATTATACTATTATTAGTATTATGTATGCTTCAAAAATGTCAATTGTTTCTACTCTTAGGCTAAGAATTAAAGAGTTGCCAAGTTGAAAGAAAAGAATTGTTTCAACTTTTAAAAGAGAATTGATGGAAAAAGGGAGATTACAATAGGACTTTGGGTTGGGGAAAAAAAAAGGTATCAATTTGTTGTAACAATATTAGGTAGGTGTGGTTTGAAGTCTACCTCACGTGTTTTAGGAAAATGAATTTTCTTTATATTTCGTATTTCAATAAAAAGGGATTAGAATTCTTATTAGTA : GCCACTAACATAA</gDNA_template>
            <first_frame> L  A  R  R  S  M  Q  K  F  T  T  T  G  L  M  C  R  K  L  C  T  R  I  Q  Q  E  F  L  I  N  G  Q  P  A   : V  R  H  *  I  E  T  G  M  I  Q  M  T  R  F  S  Q  S  T  R  N  *  L  L  L  D  *  E  F  G  F  S   : V  V  M  *  T  Q  L  Y  P  L  P  R  Q  G  I  P  *  H  S  S  S  Y  L  P  Q  L  H  G  I  L  G  M  S  K  N  R :   L  G  A  G  Q  R  Y  T  K  V  *  H  L  Q  Q  *  E  G  Q  V  M  K  C  H  Y  S  S  Q  G  Q  L  I  N  Y  L  D  H  F  *  K  E  S  H  F  Q  S  H  D  C  C  D  I  I  N  Y  T  I  I  S  I  M  Y  A  S  K  M  S  I  V  S  T  L  R  L  R  I  K  E  L  P  S  *  K  K  R  I  V  S  T  F  K  R  E  L  M  E  K  G  R  L  Q  *  D  F  G  L  G  K  K  K  G  I  N  L  L  *  Q  Y  *  V  G  V  V  *  S  L  P  H  V  F  *  E  N  E  F  S  L  Y  F  V  F  Q  *  K  G  I  R  I  L  I  S   : S  H  *  H   </first_frame>
            <second_frame>  L  H  G  E  V  C  R  N  L  L  Q  Q  A  *  C  A  E  S  Y  A  R  E  Y  N  K  N  S  L  *  M  D  S  L  Q  :  *  D  I  E  S  K  L  E  *  Y  R  *  L  D  S  P  N  L  P  G  T  N  C  C  W  I  E  N  L  G  F  Q  :  W  *  C  R  L  S  C  T  R  Y  R  D  K  V  F  P  S  T  A  Q  V  I  Y  H  N  S  M  V  S  L  V  C  Q  K  T   : G  W  G  L  D  R  G  I  Q  R  S  N  I  C  N  S  E  R  G  R  S  *  S  A  I  I  Q  A  K  G  S  L  S  T  I  *  I  I  F  K  R  R  A  T  S  K  V  M  I  V  V  T  L  *  I  I  L  L  L  V  L  C  M  L  Q  K  C  Q  L  F  L  L  L  G  *  E  L  K  S  C  Q  V  E  R  K  E  L  F  Q  L  L  K  E  N  *  W  K  K  G  D  Y  N  R  T  L  G  W  G  K  K  K  V  S  I  C  C  N  N  I  R  *  V  W  F  E  V  Y  L  T  C  F  R  K  M  N  F  L  Y  I  S  Y  F  N  K  K  G  L  E  F  L  L  V  :  A  T  N  I  </second_frame>
            <third_frame>   C  T  E  K  Y  A  E  I  Y  Y  N  R  P  D  V  Q  K  A  M  H  A  N  T  T  R  I  P  Y  K  W  T  A  C  S :   E  T  L  N  R  N  W  N  D  T  D  D  S  I  L  P  I  Y  Q  E  L  I  A  A  G  L  R  I  W  V  F  S :   G  D  V  D  S  V  V  P  V  T  A  T  R  Y  S  L  A  Q  L  K  L  S  T  T  T  P  W  Y  P  W  Y  V  K  K  Q  :  V  G  G  W  T  E  V  Y  K  G  L  T  F  A  T  V  R  G  A  G  H  E  V  P  L  F  K  P  R  A  A  Y  Q  L  F  R  S  F  L  K  G  E  P  L  P  K  S  *  L  L  *  H  Y  K  L  Y  Y  Y  *  Y  Y  V  C  F  K  N  V  N  C  F  Y  S  *  A  K  N  *  R  V  A  K  L  K  E  K  N  C  F  N  F  *  K  R  I  D  G  K  R  E  I  T  I  G  L  W  V  G  E  K  K  R  Y  Q  F  V  V  T  I  L  G  R  C  G  L  K  S  T  S  R  V  L  G  K  *  I  F  F  I  F  R  I  S  I  K  R  D  *  N  S  Y  *  * :   P  L  T  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4519" stop="4419"/>
                    <exon start="4349" stop="4254"/>
                    <exon start="4178" stop="4073"/>
                    <exon start="3982" stop="3839"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>444</number_coding_nucleotides>
                  <number_encoded_amino_acids>148</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CTEKYAEIYYNRPDVQKAMHANTTRIPYKWTACSETLNRNWNDTDDSILPIYQELIAAGLRIWVFSGDVDSVVPVTATRYSLAQLKLSTTTPWYPWYVKKQVGGWTEVYKGLTFATVRGAGHEVPLFKPRAAYQLFRSFLKGEPLPKS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="8873" PGL_stop="5021"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8873" e_stop="8519"/>
            <exon e_start="6491" e_stop="6288"/>
            <exon e_start="5184" e_stop="5021"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="0.982"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="8873" e_stop="8519" e_length="355"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="0.995">
            <gDNA_intron_boundary i_start="8518" i_stop="6492" i_length="2027"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="6491" e_stop="6288" e_length="204"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.994">
            <gDNA_intron_boundary i_start="6287" i_stop="5185" i_length="1103"/>
          </intron>
          <exon e_serial="3" e_score="0.982">
            <gDNA_exon_boundary e_start="5184" e_stop="5021" e_length="164"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8873" stop="8519"/>
              <exon start="6491" stop="6288"/>
              <exon start="5184" stop="5069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8846" stop="8519"/>
              <exon start="6491" stop="6288"/>
              <exon start="5184" stop="5021"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326199" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8763" stop="8519"/>
              <exon start="6491" stop="6288"/>
              <exon start="5184" stop="5079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344789" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAACACTCCCGCCCTTGATGACCTATATCATCACCTCATTGCTATTCACACACAAATAGCAAATTTCTTTATTTCTTTCAGTTTCTCAACAACAATAATATGGCCAAACGAAGATTAGCTTTGCTTTTGATTTTAGCAACAATTGTATGTGTGAGTGCTGCAAAGTTAAACAAATATCAGGATGAAGAAGACGCTGATAGAATAATATCGCTGCCTGGACAACCCAAAGTTTCGTTCCATCAGTACTCAGGGTATGTCACTGTCAATCAGTTTGCTGGAAGAGCTCTATTTTACTGGCTTACTGAAGCTATTGATGAACCACTTACTAAGCCTTTGGTTATTTGGCTTAATGGAG : GTCCAGGATGCTCTTCAGTGGCCTATGGTGCATCTGAAGAAATAGGGCCATTCAGGATAAACAAGACGGCTTCGGGACTGTATTTGAATAAGTTTTCATGGAACAAATTGGCAAATTTACTATTCCTTGAAACTCCAGCAGGGGTTGGATTTTCCTACAGCAATAGGTCCTCTGATCTCCTTGACACCGGGGATATTCGCACTG : CTAAGGACTCACTTCAGTTCCTTATCCACTGGATGAATCGGTTCCCACGCTACAGAAATCGTGAAGTCTACATCACAGGGGAGAGCTATGCTGGTCATTATGTCCCTCAGCTAGCCAGAGAAATAGTTCATTACAATGCCAACTCTAAGAACCCAATCAACCTC</gDNA_template>
            <first_frame> *  H  S  R  P  *  *  P  I  S  S  P  H  C  Y  S  H  T  N  S  K  F  L  Y  F  F  Q  F  L  N  N  N  N  M  A  K  R  R  L  A  L  L  L  I  L  A  T  I  V  C  V  S  A  A  K  L  N  K  Y  Q  D  E  E  D  A  D  R  I  I  S  L  P  G  Q  P  K  V  S  F  H  Q  Y  S  G  Y  V  T  V  N  Q  F  A  G  R  A  L  F  Y  W  L  T  E  A  I  D  E  P  L  T  K  P  L  V  I  W  L  N  G   : G  P  G  C  S  S  V  A  Y  G  A  S  E  E  I  G  P  F  R  I  N  K  T  A  S  G  L  Y  L  N  K  F  S  W  N  K  L  A  N  L  L  F  L  E  T  P  A  G  V  G  F  S  Y  S  N  R  S  S  D  L  L  D  T  G  D  I  R  T   : A  K  D  S  L  Q  F  L  I  H  W  M  N  R  F  P  R  Y  R  N  R  E  V  Y  I  T  G  E  S  Y  A  G  H  Y  V  P  Q  L  A  R  E  I  V  H  Y  N  A  N  S  K  N  P  I  N  L </first_frame>
            <second_frame>  N  T  P  A  L  D  D  L  Y  H  H  L  I  A  I  H  T  Q  I  A  N  F  F  I  S  F  S  F  S  T  T  I  I  W  P  N  E  D  *  L  C  F  *  F  *  Q  Q  L  Y  V  *  V  L  Q  S  *  T  N  I  R  M  K  K  T  L  I  E  *  Y  R  C  L  D  N  P  K  F  R  S  I  S  T  Q  G  M  S  L  S  I  S  L  L  E  E  L  Y  F  T  G  L  L  K  L  L  M  N  H  L  L  S  L  W  L  F  G  L  M  E  :  V  Q  D  A  L  Q  W  P  M  V  H  L  K  K  *  G  H  S  G  *  T  R  R  L  R  D  C  I  *  I  S  F  H  G  T  N  W  Q  I  Y  Y  S  L  K  L  Q  Q  G  L  D  F  P  T  A  I  G  P  L  I  S  L  T  P  G  I  F  A  L  :  L  R  T  H  F  S  S  L  S  T  G  *  I  G  S  H  A  T  E  I  V  K  S  T  S  Q  G  R  A  M  L  V  I  M  S  L  S  *  P  E  K  *  F  I  T  M  P  T  L  R  T  Q  S  T   </second_frame>
            <third_frame>   T  L  P  P  L  M  T  Y  I  I  T  S  L  L  F  T  H  K  *  Q  I  S  L  F  L  S  V  S  Q  Q  Q  *  Y  G  Q  T  K  I  S  F  A  F  D  F  S  N  N  C  M  C  E  C  C  K  V  K  Q  I  S  G  *  R  R  R  *  *  N  N  I  A  A  W  T  T  Q  S  F  V  P  S  V  L  R  V  C  H  C  Q  S  V  C  W  K  S  S  I  L  L  A  Y  *  S  Y  *  *  T  T  Y  *  A  F  G  Y  L  A  *  W  R :   S  R  M  L  F  S  G  L  W  C  I  *  R  N  R  A  I  Q  D  K  Q  D  G  F  G  T  V  F  E  *  V  F  M  E  Q  I  G  K  F  T  I  P  *  N  S  S  R  G  W  I  F  L  Q  Q  *  V  L  *  S  P  *  H  R  G  Y  S  H  C :   *  G  L  T  S  V  P  Y  P  L  D  E  S  V  P  T  L  Q  K  S  *  S  L  H  H  R  G  E  L  C  W  S  L  C  P  S  A  S  Q  R  N  S  S  L  Q  C  Q  L  *  E  P  N  Q  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8852" stop="8519"/>
                    <exon start="6491" stop="6288"/>
                    <exon start="5184" stop="5021"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>702</number_coding_nucleotides>
                  <number_encoded_amino_acids>234</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PISSPHCYSHTNSKFLYFFQFLNNNNMAKRRLALLLILATIVCVSAAKLNKYQDEEDADRIISLPGQPKVSFHQYSGYVTVNQFAGRALFYWLTEAIDEPLTKPLVIWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKFSWNKLANLLFLETPAGVGFSYSNRSSDLLDTGDIRTAKDSLQFLIHWMNRFPRYRNREVYITGESYAGHYVPQLAREIVHYNANSKNPINL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="18072" PGL_stop="17653"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="18072" e_stop="17653"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.907"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.907">
            <gDNA_exon_boundary e_start="18072" e_stop="17653" e_length="420"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18072" stop="17653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243215" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATTGTAGATGACCAATTTTTTTCTTCAAATACGAAATTAAATTACAATACACACAAAAAAATAGTTTAAATTTTTTTTCTTTAAACTAAGGAATGAAAAAGAAAAAACAGAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAAAATTAAAATATACCTTAAACTTTGATAGAAGAATCATATATACCCCTAAATAATTTTTTTTAAAAAATAGAAGTAATAAATATAAATTTTAAACTATTTTTTTAACTTCCGTAAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAGTCGTTTGTATAACGGTAAGGGCATATATGAGCAACTTTTATAACGAGAGGTATATCAGCTCGAAATGACAAAGTTAAGGG</gDNA_template>
            <first_frame> L  L  *  M  T  N  F  F  L  Q  I  R  N  *  I  T  I  H  T  K  K  *  F  K  F  F  F  F  K  L  R  N  E  K  E  K  T  E  *  E  *  E  T  Q  I  I  I  I  K  E  V  K  K  *  F  M  Y  E  K  N  *  N  I  P  *  T  L  I  E  E  S  Y  I  P  L  N  N  F  F  *  K  I  E  V  I  N  I  N  F  K  L  F  F  *  L  P  *  N  E  G  Y  M  *  A  I  L  *  R  Q  G  Y  M  *  V  V  C  I  T  V  R  A  Y  M  S  N  F  Y  N  E  R  Y  I  S  S  K  *  Q  S  *  G </first_frame>
            <second_frame>  Y  C  R  *  P  I  F  F  F  K  Y  E  I  K  L  Q  Y  T  Q  K  N  S  L  N  F  F  S  L  N  *  G  M  K  K  K  K  Q  N  K  N  K  K  L  K  *  L  *  *  K  K  S  K  N  N  L  C  M  K  K  I  K  I  Y  L  K  L  *  *  K  N  H  I  Y  P  *  I  I  F  F  K  K  *  K  *  *  I  *  I  L  N  Y  F  F  N  F  R  K  M  K  G  I  C  E  P  F  C  N  G  R  G  I  C  E  S  F  V  *  R  *  G  H  I  *  A  T  F  I  T  R  G  I  S  A  R  N  D  K  V  K   </second_frame>
            <third_frame>   I  V  D  D  Q  F  F  S  S  N  T  K  L  N  Y  N  T  H  K  K  I  V  *  I  F  F  L  *  T  K  E  *  K  R  K  N  R  I  R  I  R  N  S  N  N  Y  N  K  R  S  Q  K  I  I  Y  V  *  K  K  L  K  Y  T  L  N  F  D  R  R  I  I  Y  T  P  K  *  F  F  L  K  N  R  S  N  K  Y  K  F  *  T  I  F  L  T  S  V  K  *  R  V  Y  V  S  H  F  V  T  A  G  V  Y  V  S  R  L  Y  N  G  K  G  I  Y  E  Q  L  L  *  R  E  V  Y  Q  L  E  M  T  K  L  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0236E08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="21113" PGL_stop="21560"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="21113" e_stop="21560"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.922"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.922">
            <gDNA_exon_boundary e_start="21113" e_stop="21560" e_length="448"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21113" stop="21434"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393076" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21113" stop="21418"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393075" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21113" stop="21263"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392727" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21114" stop="21560"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200845" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAGATATATGTTTTTCTCGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAGCTAGAGAAAATTGTATTTCACTGCAATTGTATAATTCACAATTGTATAATTCGTTGACCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTGTATAATTAAGTGTATAATACAAAGATATACATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAACAGTATTATACACTTCTGTGTATAAAGCGAGAGAGGCGAGCGAGAATGGAGAGTGGCGAGCGAGATTTTTGGGAGCGAGACGCTGACAAATTTTAGCTAATGTTTGCTATGGAGCACTTTTAAATCAAACCCTAGCTATTTCATTTATTTTAGGTTATTAG</gDNA_template>
            <first_frame> *  N  V  C  I  L  H  N  Y  K  C  I  A  R  R  Y  M  F  F  S  L  Y  T  K  T  E  T  Q  Y  I  H  F  C  C  I  K  L  E  K  I  V  F  H  C  N  C  I  I  H  N  C  I  I  R  *  P  F  S  L  Q  Y  L  K  *  N  V  C  K  L  Y  N  *  V  Y  N  T  K  I  Y  I  F  A  C  V  Y  T  I  F  S  R  F  I  Q  N  R  N  S  I  I  H  F  C  V  *  S  E  R  G  E  R  E  W  R  V  A  S  E  I  F  G  S  E  T  L  T  N  F  S  *  C  L  L  W  S  T  F  K  S  N  P  S  Y  F  I  Y  F  R  L  L  </first_frame>
            <second_frame>  K  M  Y  V  Y  C  I  I  I  S  V  *  Q  E  D  I  C  F  S  R  F  I  Q  K  Q  K  H  N  I  Y  T  S  V  V  *  S  *  R  K  L  Y  F  T  A  I  V  *  F  T  I  V  *  F  V  D  L  F  L  C  N  I  *  S  K  M  F  V  N  C  I  I  K  C  I  I  Q  R  Y  T  F  L  H  V  Y  I  Q  F  S  L  A  L  Y  K  T  E  T  V  L  Y  T  S  V  Y  K  A  R  E  A  S  E  N  G  E  W  R  A  R  F  L  G  A  R  R  *  Q  I  L  A  N  V  C  Y  G  A  L  L  N  Q  T  L  A  I  S  F  I  L  G  Y  * </second_frame>
            <third_frame>   K  C  M  Y  I  A  *  L  *  V  Y  S  K  K  I  Y  V  F  L  A  L  Y  K  N  R  N  T  I  Y  T  L  L  L  Y  K  A  R  E  N  C  I  S  L  Q  L  Y  N  S  Q  L  Y  N  S  L  T  F  F  S  A  I  F  E  V  K  C  L  *  I  V  *  L  S  V  *  Y  K  D  I  H  F  C  M  C  I  Y  N  F  L  S  L  Y  T  K  Q  K  Q  Y  Y  T  L  L  C  I  K  R  E  R  R  A  R  M  E  S  G  E  R  D  F  W  E  R  D  A  D  K  F  *  L  M  F  A  M  E  H  F  *  I  K  P  *  L  F  H  L  F  *  V  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0236E08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="23279" PGL_stop="24157"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23279" e_stop="23548"/>
            <exon e_start="23913" e_stop="24157"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="0.985"/>
          <exon-only e_score="0.931"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="23279" e_stop="23548" e_length="270"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="23549" i_stop="23912" i_length="364"/>
          </intron>
          <exon e_serial="2" e_score="0.931">
            <gDNA_exon_boundary e_start="23913" e_stop="24157" e_length="245"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23279" stop="23548"/>
              <exon start="23913" stop="24157"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E364958" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAAACTAAAATGGAGAGTCCTCGTATGCAAGAAAAGATCATTGAATCGGAGAATCATGAAAATAACATCAAAGTAAACAAGACATCTAATGTCGATGAAGTTCAACATTCTCCCTCAGCGCTCAACAAGTCAGATGAATTACTACATTCTGCCTCAACGCTCAACAAGTCAGATGGTAAAGCAGTTTCTCAGTTTGAGGCAAGTTATGCTTCCTCGCCCCGCCTCTCCAATGAGAGTGGAAACAGCAGCAGCTCCTTTGCTTTTCCATT : ACTACTAAACGATGCTGGGAAAACTGGCTCACTCAAAGCTCCCTCTGCGAAAATGGAGAGACCTCAACCTCAGCCTCAGCATCAGCATCAGCCACAGCCACATCCACATCCACAGCCACAACCACAACCACAACCCAAGTATGAACCAGATTCAGAACCACAAATGCAGCCACAATCACCGCAACAATCAGAGTCATACACGAAATCAGAGTCAAAACAAGCAGAGTCACTGCCAAAACTGGGAG</gDNA_template>
            <first_frame> *  N  *  N  G  E  S  S  Y  A  R  K  D  H  *  I  G  E  S  *  K  *  H  Q  S  K  Q  D  I  *  C  R  *  S  S  T  F  S  L  S  A  Q  Q  V  R  *  I  T  T  F  C  L  N  A  Q  Q  V  R  W  *  S  S  F  S  V  *  G  K  L  C  F  L  A  P  P  L  Q  *  E  W  K  Q  Q  Q  L  L  C  F  S  I  :  T  T  K  R  C  W  E  N  W  L  T  Q  S  S  L  C  E  N  G  E  T  S  T  S  A  S  A  S  A  S  A  T  A  T  S  T  S  T  A  T  T  T  T  T  T  Q  V  *  T  R  F  R  T  T  N  A  A  T  I  T  A  T  I  R  V  I  H  E  I  R  V  K  T  S  R  V  T  A  K  T  G   </first_frame>
            <second_frame>  E  T  K  M  E  S  P  R  M  Q  E  K  I  I  E  S  E  N  H  E  N  N  I  K  V  N  K  T  S  N  V  D  E  V  Q  H  S  P  S  A  L  N  K  S  D  E  L  L  H  S  A  S  T  L  N  K  S  D  G  K  A  V  S  Q  F  E  A  S  Y  A  S  S  P  R  L  S  N  E  S  G  N  S  S  S  S  F  A  F  P  L :   L  L  N  D  A  G  K  T  G  S  L  K  A  P  S  A  K  M  E  R  P  Q  P  Q  P  Q  H  Q  H  Q  P  Q  P  H  P  H  P  Q  P  Q  P  Q  P  Q  P  K  Y  E  P  D  S  E  P  Q  M  Q  P  Q  S  P  Q  Q  S  E  S  Y  T  K  S  E  S  K  Q  A  E  S  L  P  K  L  G  </second_frame>
            <third_frame>   K  L  K  W  R  V  L  V  C  K  K  R  S  L  N  R  R  I  M  K  I  T  S  K  *  T  R  H  L  M  S  M  K  F  N  I  L  P  Q  R  S  T  S  Q  M  N  Y  Y  I  L  P  Q  R  S  T  S  Q  M  V  K  Q  F  L  S  L  R  Q  V  M  L  P  R  P  A  S  P  M  R  V  E  T  A  A  A  P  L  L  F  H   : Y  Y  *  T  M  L  G  K  L  A  H  S  K  L  P  L  R  K  W  R  D  L  N  L  S  L  S  I  S  I  S  H  S  H  I  H  I  H  S  H  N  H  N  H  N  P  S  M  N  Q  I  Q  N  H  K  C  S  H  N  H  R  N  N  Q  S  H  T  R  N  Q  S  Q  N  K  Q  S  H  C  Q  N  W  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23280" stop="23548"/>
                    <exon start="23913" stop="24156"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>513</number_coding_nucleotides>
                  <number_encoded_amino_acids>171</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ETKMESPRMQEKIIESENHENNIKVNKTSNVDEVQHSPSALNKSDELLHSASTLNKSDGKAVSQFEASYASSPRLSNESGNSSSSFAFPLLLNDAGKTGSLKAPSAKMERPQPQPQHQHQPQPHPHPQPQPQPQPKYEPDSEPQMQPQSPQQSESYTKSESKQAESLPKLG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="27915" PGL_stop="24593"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="27915" e_stop="27574"/>
            <exon e_start="27086" e_stop="26223"/>
            <exon e_start="26031" e_stop="25557"/>
            <exon e_start="25485" e_stop="24593"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="0.997"/>
          <exon-intron don_prob="0.616" acc_prob="0.999" e_score="0.999"/>
          <exon-intron don_prob="0.997" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="27915" e_stop="27574" e_length="342"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="27573" i_stop="27087" i_length="487"/>
          </intron>
          <exon e_serial="2" e_score="0.999">
            <gDNA_exon_boundary e_start="27086" e_stop="26223" e_length="864"/>
          </exon>
          <intron i_serial="2" don_prob="0.616" acc_prob="0.999">
            <gDNA_intron_boundary i_start="26222" i_stop="26032" i_length="191"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="26031" e_stop="25557" e_length="475"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.999">
            <gDNA_intron_boundary i_start="25556" i_stop="25486" i_length="71"/>
          </intron>
          <exon e_serial="4" e_score="0.999">
            <gDNA_exon_boundary e_start="25485" e_stop="24593" e_length="893"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27915" stop="27574"/>
              <exon start="27086" stop="26223"/>
              <exon start="26031" stop="25557"/>
              <exon start="25485" stop="24593"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25843" stop="25557"/>
              <exon start="25485" stop="25394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319273" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGTTGTTACAAATCAGGTTAATGGCAGCAGAGTGAGAGAGAACCCTCGCGGCGTTATAGTCGATGGCCGGAGACAAATTGAAGGCGGGTCTTCCTGGCGGAAAAGCGGCGGAACCGCAGTACCAGGCGGCGAAAACATCGGTGTGGTGGGATATAGAGAATTGTCAGGTGCCCAGGGGATGCGACGCTCATGCAATTGCTCAGAATATAAACGCTGCATTGATGAAGATGAACTATAATGGACCAGTCGCTATTTCCGCCTATGGAGACACAAATCGTATTCCCTCGTACATTCAACGAGCCCTTTCTAGTACTGGAATCAGTCTCAATCACGTCCCGGCCG : GGGCTAAGGATGCTAGTGATAAGAAAATATTGGTGGATATGCTATTTTGGGCAGTGGACAATCCTGCACCTGCCAATTATTTGCTCATTTCAGGAGACAGGGATTTCTCCAATGCCATTCATCAGTTACGGATGAGGAGATATAATATTCTTCTAGCACAGCCTTTTAAGGCTTCTCCTGCTCTTGCTGCTGCTGCCACAAATGTGTGGCAATGGATAAGCCTTGCTGCTGGAGAATCTCCACGAGAACTTACTTTTGGTACTAACACATTACATCAAGAATCTATACCGACTCCAGTTTATGAACCTATATCAGCAAACCAACCTGCATATTCTAATGCCAATACCAATATCAATACCAACGCCAATAATGCCAATGCCAACTCCAACTCCAACGCCAAAGCCAAATCCAAAGCCAATGCCAATGCCAATGCCAACGCCAATATCAATACCAATATCAATACCAGTGCCAACGCCAATATCAATACCAATAGCAATGCCAATGCCAATGCCAATGCCAATACCAATACCACAACCAATGCTAATGCTAATACTAAAACTAAAGTTATTTACGTACCAAAGAACTCAAATCAACTGACTATGACCGGTAGGTCAAGTATGCCAGCTAGAATTGAAGAAACTAGTAGCAGCTATCGCCCACACGCACCAGCTGTTGCACCAGTGCAGTTTGCACCACATATATTTTTCGCAAAGTCTGATAGTTCAGAGAACCATAACAGTAAATTCATAGAAAACAAGCCTGCTCAGCGTACTCAATCTCAGCCTCCTCTTGTTCGAGATAACTTTGTGAAGAAATTCAACTTCCGCCAGAAGAATTTGCAACCTTCGCTTCAACGACCTGAAG : GTAGGGGTGATTTATGTGGTTCTATGAACAAGGGTGATGTATGTCCTGAGTTTTCCTTCCTTCCATCCTCATCGGGTGCTTCTAAATCTGTCTCTGGTAATTCAAATTTGGAACTCCAGCTGCCTGAACTCATTCAAGGTCTTATAGGGGTCATCCTTCTTTCGTTGGACAGTTTGAAGCTCGAGAAGATTGTGCCTACCAAAGAAAACATCGGTTATTGTCTACGTTATGGTAACCCTAAATATCGTCATATTGATGTCACAGTAGCATTAAATGCTGCACTAGAGCAACAGATGATAGTAAAGTTAAAACAAGCTGATATTGAACTATATGTTGGTAGAAATGAGAGGATTTGGAAATGTGAGAATCCACTTGGTGGCAATCCTAACCAATATCACAATGCAACTTGGAACGTGATTGAGAAATTTCTTTGTTCAACTGTTGGACGTTCAGCAATAGCAGCATCTGAATGCAG : GTATGAAGCTGCTTTGATTCTTAGAAATGCATGCCTTAAAGACCTTACATTGGGTGAAGTACTTCAAATCCTGAATATGATTATCACTCTGAAGCGTTGGATTAAAACTCGCTCTGATTGGCATCAGATTACTATTACTCTTCCAGAAACTAATAATGACAATGATACCAGAACATGCATCTAGCCGACAGATCTCTTTTGGTATTTTAGCATGTCATAGCCGTGACATGTTTTCAGAAATGGATTTGATATCTTGGGAGTTACAGATTTTAAAAGAAGCTCAATTTTGTATAAGATGGTATGTTCAGTGCTTACTTGATGACGGCATAGGAGCGAGATCTTTTTTACTTTTGTGGACCTCTTTCCAAGACACTTGCAGCTGATATAAGTGTGCAGCTAAAGGGATGTGATTGTTATCATGCTTCTATCAACCTTGCTATGCTGATGGATCTCGTAATCTTACATTTACAGCAGCATCGTTTCTGCTATCTTCACTTTCTTTATCTTAAAATTTCCTTTTCGCTGGAAATTTTGTTTGCATCAGCAAGTCTACTACTGCTTTCACATTACTTGGATTTGGGGCATCCAGGAATATGCAGATTGTATTTTGGTTACCTTGGTGAGTTGAGAACTGGCCAGAAGCACAAAGGTTTTGGGTTGCAGGTTGACAGGAATATTTTGTAGTCACTGTTCTTCTAGCCAGAATATAAATAATGAAAAGTGGTTTAGAACAGATCCAGTAACCTTGTTTTTTAAGCTTTATCAAATGGAATATGTAGATTTACTTCACCAGCGTTTTTGATAACGTTGTCCTTTTGCCTATTCTTTTTGTTTCTTGGAACTTATGACTGTAAATCACTTCTGCAGATAAGATTATATGTAGCTTTAATTGG</gDNA_template>
            <first_frame> C  C  Y  K  S  G  *  W  Q  Q  S  E  R  E  P  S  R  R  Y  S  R  W  P  E  T  N  *  R  R  V  F  L  A  E  K  R  R  N  R  S  T  R  R  R  K  H  R  C  G  G  I  *  R  I  V  R  C  P  G  D  A  T  L  M  Q  L  L  R  I  *  T  L  H  *  *  R  *  T  I  M  D  Q  S  L  F  P  P  M  E  T  Q  I  V  F  P  R  T  F  N  E  P  F  L  V  L  E  S  V  S  I  T  S  R  P  :  G  L  R  M  L  V  I  R  K  Y  W  W  I  C  Y  F  G  Q  W  T  I  L  H  L  P  I  I  C  S  F  Q  E  T  G  I  S  P  M  P  F  I  S  Y  G  *  G  D  I  I  F  F  *  H  S  L  L  R  L  L  L  L  L  L  L  L  P  Q  M  C  G  N  G  *  A  L  L  L  E  N  L  H  E  N  L  L  L  V  L  T  H  Y  I  K  N  L  Y  R  L  Q  F  M  N  L  Y  Q  Q  T  N  L  H  I  L  M  P  I  P  I  S  I  P  T  P  I  M  P  M  P  T  P  T  P  T  P  K  P  N  P  K  P  M  P  M  P  M  P  T  P  I  S  I  P  I  S  I  P  V  P  T  P  I  S  I  P  I  A  M  P  M  P  M  P  M  P  I  P  I  P  Q  P  M  L  M  L  I  L  K  L  K  L  F  T  Y  Q  R  T  Q  I  N  *  L  *  P  V  G  Q  V  C  Q  L  E  L  K  K  L  V  A  A  I  A  H  T  H  Q  L  L  H  Q  C  S  L  H  H  I  Y  F  S  Q  S  L  I  V  Q  R  T  I  T  V  N  S  *  K  T  S  L  L  S  V  L  N  L  S  L  L  L  F  E  I  T  L  *  R  N  S  T  S  A  R  R  I  C  N  L  R  F  N  D  L  K  :  V  G  V  I  Y  V  V  L  *  T  R  V  M  Y  V  L  S  F  P  S  F  H  P  H  R  V  L  L  N  L  S  L  V  I  Q  I  W  N  S  S  C  L  N  S  F  K  V  L  *  G  S  S  F  F  R  W  T  V  *  S  S  R  R  L  C  L  P  K  K  T  S  V  I  V  Y  V  M  V  T  L  N  I  V  I  L  M  S  Q  *  H  *  M  L  H  *  S  N  R  *  *  *  S  *  N  K  L  I  L  N  Y  M  L  V  E  M  R  G  F  G  N  V  R  I  H  L  V  A  I  L  T  N  I  T  M  Q  L  G  T  *  L  R  N  F  F  V  Q  L  L  D  V  Q  Q  *  Q  H  L  N  A   : G  M  K  L  L  *  F  L  E  M  H  A  L  K  T  L  H  W  V  K  Y  F  K  S  *  I  *  L  S  L  *  S  V  G  L  K  L  A  L  I  G  I  R  L  L  L  L  F  Q  K  L  I  M  T  M  I  P  E  H  A  S  S  R  Q  I  S  F  G  I  L  A  C  H  S  R  D  M  F  S  E  M  D  L  I  S  W  E  L  Q  I  L  K  E  A  Q  F  C  I  R  W  Y  V  Q  C  L  L  D  D  G  I  G  A  R  S  F  L  L  L  W  T  S  F  Q  D  T  C  S  *  Y  K  C  A  A  K  G  M  *  L  L  S  C  F  Y  Q  P  C  Y  A  D  G  S  R  N  L  T  F  T  A  A  S  F  L  L  S  S  L  S  L  S  *  N  F  L  F  A  G  N  F  V  C  I  S  K  S  T  T  A  F  T  L  L  G  F  G  A  S  R  N  M  Q  I  V  F  W  L  P  W  *  V  E  N  W  P  E  A  Q  R  F  W  V  A  G  *  Q  E  Y  F  V  V  T  V  L  L  A  R  I  *  I  M  K  S  G  L  E  Q  I  Q  *  P  C  F  L  S  F  I  K  W  N  M  *  I  Y  F  T  S  V  F  D  N  V  V  L  L  P  I  L  F  V  S  W  N  L  *  L  *  I  T  S  A  D  K  I  I  C  S  F  N  W </first_frame>
            <second_frame>  V  V  T  N  Q  V  N  G  S  R  V  R  E  N  P  R  G  V  I  V  D  G  R  R  Q  I  E  G  G  S  S  W  R  K  S  G  G  T  A  V  P  G  G  E  N  I  G  V  V  G  Y  R  E  L  S  G  A  Q  G  M  R  R  S  C  N  C  S  E  Y  K  R  C  I  D  E  D  E  L  *  W  T  S  R  Y  F  R  L  W  R  H  K  S  Y  S  L  V  H  S  T  S  P  F  *  Y  W  N  Q  S  Q  S  R  P  G  R :   G  *  G  C  *  *  *  E  N  I  G  G  Y  A  I  L  G  S  G  Q  S  C  T  C  Q  L  F  A  H  F  R  R  Q  G  F  L  Q  C  H  S  S  V  T  D  E  E  I  *  Y  S  S  S  T  A  F  *  G  F  S  C  S  C  C  C  C  H  K  C  V  A  M  D  K  P  C  C  W  R  I  S  T  R  T  Y  F  W  Y  *  H  I  T  S  R  I  Y  T  D  S  S  L  *  T  Y  I  S  K  P  T  C  I  F  *  C  Q  Y  Q  Y  Q  Y  Q  R  Q  *  C  Q  C  Q  L  Q  L  Q  R  Q  S  Q  I  Q  S  Q  C  Q  C  Q  C  Q  R  Q  Y  Q  Y  Q  Y  Q  Y  Q  C  Q  R  Q  Y  Q  Y  Q  *  Q  C  Q  C  Q  C  Q  C  Q  Y  Q  Y  H  N  Q  C  *  C  *  Y  *  N  *  S  Y  L  R  T  K  E  L  K  S  T  D  Y  D  R  *  V  K  Y  A  S  *  N  *  R  N  *  *  Q  L  S  P  T  R  T  S  C  C  T  S  A  V  C  T  T  Y  I  F  R  K  V  *  *  F  R  E  P  *  Q  *  I  H  R  K  Q  A  C  S  A  Y  S  I  S  A  S  S  C  S  R  *  L  C  E  E  I  Q  L  P  P  E  E  F  A  T  F  A  S  T  T  *  R :   *  G  *  F  M  W  F  Y  E  Q  G  *  C  M  S  *  V  F  L  P  S  I  L  I  G  C  F  *  I  C  L  W  *  F  K  F  G  T  P  A  A  *  T  H  S  R  S  Y  R  G  H  P  S  F  V  G  Q  F  E  A  R  E  D  C  A  Y  Q  R  K  H  R  L  L  S  T  L  W  *  P  *  I  S  S  Y  *  C  H  S  S  I  K  C  C  T  R  A  T  D  D  S  K  V  K  T  S  *  Y  *  T  I  C  W  *  K  *  E  D  L  E  M  *  E  S  T  W  W  Q  S  *  P  I  S  Q  C  N  L  E  R  D  *  E  I  S  L  F  N  C  W  T  F  S  N  S  S  I  *  M  Q  :  V  *  S  C  F  D  S  *  K  C  M  P  *  R  P  Y  I  G  *  S  T  S  N  P  E  Y  D  Y  H  S  E  A  L  D  *  N  S  L  *  L  A  S  D  Y  Y  Y  S  S  R  N  *  *  *  Q  *  Y  Q  N  M  H  L  A  D  R  S  L  L  V  F  *  H  V  I  A  V  T  C  F  Q  K  W  I  *  Y  L  G  S  Y  R  F  *  K  K  L  N  F  V  *  D  G  M  F  S  A  Y  L  M  T  A  *  E  R  D  L  F  Y  F  C  G  P  L  S  K  T  L  A  A  D  I  S  V  Q  L  K  G  C  D  C  Y  H  A  S  I  N  L  A  M  L  M  D  L  V  I  L  H  L  Q  Q  H  R  F  C  Y  L  H  F  L  Y  L  K  I  S  F  S  L  E  I  L  F  A  S  A  S  L  L  L  L  S  H  Y  L  D  L  G  H  P  G  I  C  R  L  Y  F  G  Y  L  G  E  L  R  T  G  Q  K  H  K  G  F  G  L  Q  V  D  R  N  I  L  *  S  L  F  F  *  P  E  Y  K  *  *  K  V  V  *  N  R  S  S  N  L  V  F  *  A  L  S  N  G  I  C  R  F  T  S  P  A  F  L  I  T  L  S  F  C  L  F  F  L  F  L  G  T  Y  D  C  K  S  L  L  Q  I  R  L  Y  V  A  L  I   </second_frame>
            <third_frame>   L  L  Q  I  R  L  M  A  A  E  *  E  R  T  L  A  A  L  *  S  M  A  G  D  K  L  K  A  G  L  P  G  G  K  A  A  E  P  Q  Y  Q  A  A  K  T  S  V  W  W  D  I  E  N  C  Q  V  P  R  G  C  D  A  H  A  I  A  Q  N  I  N  A  A  L  M  K  M  N  Y  N  G  P  V  A  I  S  A  Y  G  D  T  N  R  I  P  S  Y  I  Q  R  A  L  S  S  T  G  I  S  L  N  H  V  P  A   : G  A  K  D  A  S  D  K  K  I  L  V  D  M  L  F  W  A  V  D  N  P  A  P  A  N  Y  L  L  I  S  G  D  R  D  F  S  N  A  I  H  Q  L  R  M  R  R  Y  N  I  L  L  A  Q  P  F  K  A  S  P  A  L  A  A  A  A  T  N  V  W  Q  W  I  S  L  A  A  G  E  S  P  R  E  L  T  F  G  T  N  T  L  H  Q  E  S  I  P  T  P  V  Y  E  P  I  S  A  N  Q  P  A  Y  S  N  A  N  T  N  I  N  T  N  A  N  N  A  N  A  N  S  N  S  N  A  K  A  K  S  K  A  N  A  N  A  N  A  N  A  N  I  N  T  N  I  N  T  S  A  N  A  N  I  N  T  N  S  N  A  N  A  N  A  N  A  N  T  N  T  T  T  N  A  N  A  N  T  K  T  K  V  I  Y  V  P  K  N  S  N  Q  L  T  M  T  G  R  S  S  M  P  A  R  I  E  E  T  S  S  S  Y  R  P  H  A  P  A  V  A  P  V  Q  F  A  P  H  I  F  F  A  K  S  D  S  S  E  N  H  N  S  K  F  I  E  N  K  P  A  Q  R  T  Q  S  Q  P  P  L  V  R  D  N  F  V  K  K  F  N  F  R  Q  K  N  L  Q  P  S  L  Q  R  P  E   : G  R  G  D  L  C  G  S  M  N  K  G  D  V  C  P  E  F  S  F  L  P  S  S  S  G  A  S  K  S  V  S  G  N  S  N  L  E  L  Q  L  P  E  L  I  Q  G  L  I  G  V  I  L  L  S  L  D  S  L  K  L  E  K  I  V  P  T  K  E  N  I  G  Y  C  L  R  Y  G  N  P  K  Y  R  H  I  D  V  T  V  A  L  N  A  A  L  E  Q  Q  M  I  V  K  L  K  Q  A  D  I  E  L  Y  V  G  R  N  E  R  I  W  K  C  E  N  P  L  G  G  N  P  N  Q  Y  H  N  A  T  W  N  V  I  E  K  F  L  C  S  T  V  G  R  S  A  I  A  A  S  E  C  R :   Y  E  A  A  L  I  L  R  N  A  C  L  K  D  L  T  L  G  E  V  L  Q  I  L  N  M  I  I  T  L  K  R  W  I  K  T  R  S  D  W  H  Q  I  T  I  T  L  P  E  T  N  N  D  N  D  T  R  T  C  I  *  P  T  D  L  F  W  Y  F  S  M  S  *  P  *  H  V  F  R  N  G  F  D  I  L  G  V  T  D  F  K  R  S  S  I  L  Y  K  M  V  C  S  V  L  T  *  *  R  H  R  S  E  I  F  F  T  F  V  D  L  F  P  R  H  L  Q  L  I  *  V  C  S  *  R  D  V  I  V  I  M  L  L  S  T  L  L  C  *  W  I  S  *  S  Y  I  Y  S  S  I  V  S  A  I  F  T  F  F  I  L  K  F  P  F  R  W  K  F  C  L  H  Q  Q  V  Y  Y  C  F  H  I  T  W  I  W  G  I  Q  E  Y  A  D  C  I  L  V  T  L  V  S  *  E  L  A  R  S  T  K  V  L  G  C  R  L  T  G  I  F  C  S  H  C  S  S  S  Q  N  I  N  N  E  K  W  F  R  T  D  P  V  T  L  F  F  K  L  Y  Q  M  E  Y  V  D  L  L  H  Q  R  F  *  *  R  C  P  F  A  Y  S  F  C  F  L  E  L  M  T  V  N  H  F  C  R  *  D  Y  M  *  L  *  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="27856" stop="27574"/>
                    <exon start="27086" stop="26223"/>
                    <exon start="26031" stop="25557"/>
                    <exon start="25485" stop="25302"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1803</number_coding_nucleotides>
                  <number_encoded_amino_acids>601</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SMAGDKLKAGLPGGKAAEPQYQAAKTSVWWDIENCQVPRGCDAHAIAQNINAALMKMNYNGPVAISAYGDTNRIPSYIQRALSSTGISLNHVPAGAKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNAIHQLRMRRYNILLAQPFKASPALAAAATNVWQWISLAAGESPRELTFGTNTLHQESIPTPVYEPISANQPAYSNANTNINTNANNANANSNSNAKAKSKANANANANANINTNINTSANANINTNSNANANANANTNTTTNANANTKTKVIYVPKNSNQLTMTGRSSMPARIEETSSSYRPHAPAVAPVQFAPHIFFAKSDSSENHNSKFIENKPAQRTQSQPPLVRDNFVKKFNFRQKNLQPSLQRPEGRGDLCGSMNKGDVCPEFSFLPSSSGASKSVSGNSNLELQLPELIQGLIGVILLSLDSLKLEKIVPTKENIGYCLRYGNPKYRHIDVTVALNAALEQQMIVKLKQADIELYVGRNERIWKCENPLGGNPNQYHNATWNVIEKFLCSTVGRSAIAASECRYEAALILRNACLKDLTLGEVLQILNMIITLKRWIKTRSDWHQITITLPETNNDNDTRTCI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25155" stop="24802"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>351</number_coding_nucleotides>
                  <number_encoded_amino_acids>117</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ERDLFYFCGPLSKTLAADISVQLKGCDCYHASINLAMLMDLVILHLQQHRFCYLHFLYLKISFSLEILFASASLLLLSHYLDLGHPGICRLYFGYLGELRTGQKHKGFGLQVDRNIL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="64472" PGL_stop="61354"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64472" e_stop="63747"/>
            <exon e_start="62406" e_stop="61489"/>
            <exon e_start="61366" e_stop="61354"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.987" e_score="0.996"/>
          <exon-intron don_prob="0.000" acc_prob="0.761" e_score="0.999"/>
          <exon-only e_score="0.692"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="64472" e_stop="63747" e_length="726"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.987">
            <gDNA_intron_boundary i_start="63746" i_stop="62407" i_length="1340"/>
          </intron>
          <exon e_serial="2" e_score="0.999">
            <gDNA_exon_boundary e_start="62406" e_stop="61489" e_length="918"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.761">
            <gDNA_intron_boundary i_start="61488" i_stop="61367" i_length="122"/>
          </intron>
          <exon e_serial="3" e_score="0.692">
            <gDNA_exon_boundary e_start="61366" e_stop="61354" e_length="13"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64472" stop="63985"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332647" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64472" stop="64067"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333368" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64447" stop="63846"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E304445" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64437" stop="63903"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313409" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64432" stop="63747"/>
              <exon start="62406" stop="62279"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723991" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64428" stop="63993"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334792" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64428" stop="64228"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334894" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63842" stop="63747"/>
              <exon start="62406" stop="61698"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577604" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62142" stop="61820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233824" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62036" stop="61489"/>
              <exon start="61366" stop="61354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346438" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGTTCCTCTTTTTCTCTGTTTTTCTTTATATGGCTCAAGTTAACTCTTTTGCCGGCGAATTCAGGAACTCCGGCAACTACATTCTCTAACGTTTACAGAATTTTCTGTTTATTATAATTGAATTAAAAAGTTGTTTGGAGTTTTGGGGTTTGGTTTGTTTAAAATGGCTGAAGCTGAAGAAAATAGAGAAAAGAGGTGTTTTTCTAGTATGCAGATGGAAGTTTTTTCAAGAGATCTGTTGCATAAATTTATGAATGGAAACAACAATAAATTTCATGAAATTCCTAATGAGGAAGATGAATTGGAGCTGAGTTTGGGGCTTTCCTTGAATGGAAGATTTGGGGTAGACCCAGAAAGGGCTAAGAGACTAAAACGCTCTTCTTCAATTTCAAACTTTGTGTTTTCCGGCGGGGATGAGAGTAATGGGCGTTGTTCATTCTCTGTTGGTCCGATTGCGAGGACGTGTTCTTTACCTGTTGAGGGTGAGGAGGAGTGCAGAAAAAGGAAGGAGTTGCAATCTCTGAGGCGTTTGGAGGCTAAAAGAAAGAGAATGGAGAAATTACGAGTGGTTAAGGATAAGGTTGATTTAGATGAACGTCCTGAAGAAAATGGTGGGAGTAATAATGGTCCAGTTGGAAATTCATTGCCTCTGTCACAAGGGTCTATGGCTTCTCAGGGAAGTGGTTCTTCAGGAATTTCTGATTTTGGGAGTCAACCCATTCAAG : GGCCAGGTGACAACAGTACTGGGGCAAATACTCCGACTAGCATCAAGCCTTCAGAGCAAGAACATGAACAGAAACAGGTTGCCAAACCACCTAAAATCACAAGCGAAAAACCACCTACCACATGTAATGGAAGTGCCAGCAAGGAAGCGAAAGAAATGTTCAAAAACTACATGCTCAACATGCCCTGTGTTTCCACAATGGGCAAGGGGCCAAATGGTAAGAAGATTGAAGGATTTCTGTACAGATATCAGAAGGGAGAGGAAGTAAAAATAATGTGTGTTTGTCATGGTAACTTTCTCTCCCCAGCTGAGTTTGTGAAACATGCTGGTGGCGGTGATGTTGCAAATCCGTTGAAGCAAATTGTCGTCAATCCTTCACCTCTGTTGAGATGATGCCAGTGGAACTCTATAATGACACAGAAAAGGGGCAAAGCTTCAAGAATTCAGCTTTGCTATCATCGTTCATCTTCTTTTGTAACATGGACCAAGGTTCTTTTTTTATTTTCGAGTAGATAGTAGTTTCTTGCGGGATATTGCATAATCAATGGGCAAGTTTATCCCCTTTCTGTGGGGAAAAAAAATTTAAGAATTCCCATTGGCATTTATCTTTCAGTTATTCGTTATTTGGAAGTCCGCATTAATTTTTCGTACATGAAGGGACTGTAGAGTGCAGTTGGTTCCATATCGGTTTCAACACGAAATGTGACTTTTGAAGGGGTGGTATTATCAGCAAAGTCTAACAAGCTTGACCAGCCTTTGCTCTTAACTGTTGCAGTTTCATGGCGTTAAAGAGTCGTCGGATTACTTGAAAATTTTCTTAGTGCTCTTCTCTCTTCAATGCGGCCTTTGTTTCTAACGATAACGTTAGTAATTCCATGTAAAATATATTAGTTAACAATGATTTTTTGTTCGCTTCAAA : AAAACATACAAAT</gDNA_template>
            <first_frame> L  F  L  F  F  S  V  F  L  Y  M  A  Q  V  N  S  F  A  G  E  F  R  N  S  G  N  Y  I  L  *  R  L  Q  N  F  L  F  I  I  I  E  L  K  S  C  L  E  F  W  G  L  V  C  L  K  W  L  K  L  K  K  I  E  K  R  G  V  F  L  V  C  R  W  K  F  F  Q  E  I  C  C  I  N  L  *  M  E  T  T  I  N  F  M  K  F  L  M  R  K  M  N  W  S  *  V  W  G  F  P  *  M  E  D  L  G  *  T  Q  K  G  L  R  D  *  N  A  L  L  Q  F  Q  T  L  C  F  P  A  G  M  R  V  M  G  V  V  H  S  L  L  V  R  L  R  G  R  V  L  Y  L  L  R  V  R  R  S  A  E  K  G  R  S  C  N  L  *  G  V  W  R  L  K  E  R  E  W  R  N  Y  E  W  L  R  I  R  L  I  *  M  N  V  L  K  K  M  V  G  V  I  M  V  Q  L  E  I  H  C  L  C  H  K  G  L  W  L  L  R  E  V  V  L  Q  E  F  L  I  L  G  V  N  P  F  K  :  G  Q  V  T  T  V  L  G  Q  I  L  R  L  A  S  S  L  Q  S  K  N  M  N  R  N  R  L  P  N  H  L  K  S  Q  A  K  N  H  L  P  H  V  M  E  V  P  A  R  K  R  K  K  C  S  K  T  T  C  S  T  C  P  V  F  P  Q  W  A  R  G  Q  M  V  R  R  L  K  D  F  C  T  D  I  R  R  E  R  K  *  K  *  C  V  F  V  M  V  T  F  S  P  Q  L  S  L  *  N  M  L  V  A  V  M  L  Q  I  R  *  S  K  L  S  S  I  L  H  L  C  *  D  D  A  S  G  T  L  *  *  H  R  K  G  A  K  L  Q  E  F  S  F  A  I  I  V  H  L  L  L  *  H  G  P  R  F  F  F  Y  F  R  V  D  S  S  F  L  R  D  I  A  *  S  M  G  K  F  I  P  F  L  W  G  K  K  I  *  E  F  P  L  A  F  I  F  Q  L  F  V  I  W  K  S  A  L  I  F  R  T  *  R  D  C  R  V  Q  L  V  P  Y  R  F  Q  H  E  M  *  L  L  K  G  W  Y  Y  Q  Q  S  L  T  S  L  T  S  L  C  S  *  L  L  Q  F  H  G  V  K  E  S  S  D  Y  L  K  I  F  L  V  L  F  S  L  Q  C  G  L  C  F  *  R  *  R  *  *  F  H  V  K  Y  I  S  *  Q  *  F  F  V  R  F  K  :  K  T  Y  K  </first_frame>
            <second_frame>  C  S  S  F  S  L  F  F  F  I  W  L  K  L  T  L  L  P  A  N  S  G  T  P  A  T  T  F  S  N  V  Y  R  I  F  C  L  L  *  L  N  *  K  V  V  W  S  F  G  V  W  F  V  *  N  G  *  S  *  R  K  *  R  K  E  V  F  F  *  Y  A  D  G  S  F  F  K  R  S  V  A  *  I  Y  E  W  K  Q  Q  *  I  S  *  N  S  *  *  G  R  *  I  G  A  E  F  G  A  F  L  E  W  K  I  W  G  R  P  R  K  G  *  E  T  K  T  L  F  F  N  F  K  L  C  V  F  R  R  G  *  E  *  W  A  L  F  I  L  C  W  S  D  C  E  D  V  F  F  T  C  *  G  *  G  G  V  Q  K  K  E  G  V  A  I  S  E  A  F  G  G  *  K  K  E  N  G  E  I  T  S  G  *  G  *  G  *  F  R  *  T  S  *  R  K  W  W  E  *  *  W  S  S  W  K  F  I  A  S  V  T  R  V  Y  G  F  S  G  K  W  F  F  R  N  F  *  F  W  E  S  T  H  S  R :   A  R  *  Q  Q  Y  W  G  K  Y  S  D  *  H  Q  A  F  R  A  R  T  *  T  E  T  G  C  Q  T  T  *  N  H  K  R  K  T  T  Y  H  M  *  W  K  C  Q  Q  G  S  E  R  N  V  Q  K  L  H  A  Q  H  A  L  C  F  H  N  G  Q  G  A  K  W  *  E  D  *  R  I  S  V  Q  I  S  E  G  R  G  S  K  N  N  V  C  L  S  W  *  L  S  L  P  S  *  V  C  E  T  C  W  W  R  *  C  C  K  S  V  E  A  N  C  R  Q  S  F  T  S  V  E  M  M  P  V  E  L  Y  N  D  T  E  K  G  Q  S  F  K  N  S  A  L  L  S  S  F  I  F  F  C  N  M  D  Q  G  S  F  F  I  F  E  *  I  V  V  S  C  G  I  L  H  N  Q  W  A  S  L  S  P  F  C  G  E  K  K  F  K  N  S  H  W  H  L  S  F  S  Y  S  L  F  G  S  P  H  *  F  F  V  H  E  G  T  V  E  C  S  W  F  H  I  G  F  N  T  K  C  D  F  *  R  G  G  I  I  S  K  V  *  Q  A  *  P  A  F  A  L  N  C  C  S  F  M  A  L  K  S  R  R  I  T  *  K  F  S  *  C  S  S  L  F  N  A  A  F  V  S  N  D  N  V  S  N  S  M  *  N  I  L  V  N  N  D  F  L  F  A  S  K :   K  H  T  N </second_frame>
            <third_frame>   V  P  L  F  L  C  F  S  L  Y  G  S  S  *  L  F  C  R  R  I  Q  E  L  R  Q  L  H  S  L  T  F  T  E  F  S  V  Y  Y  N  *  I  K  K  L  F  G  V  L  G  F  G  L  F  K  M  A  E  A  E  E  N  R  E  K  R  C  F  S  S  M  Q  M  E  V  F  S  R  D  L  L  H  K  F  M  N  G  N  N  N  K  F  H  E  I  P  N  E  E  D  E  L  E  L  S  L  G  L  S  L  N  G  R  F  G  V  D  P  E  R  A  K  R  L  K  R  S  S  S  I  S  N  F  V  F  S  G  G  D  E  S  N  G  R  C  S  F  S  V  G  P  I  A  R  T  C  S  L  P  V  E  G  E  E  E  C  R  K  R  K  E  L  Q  S  L  R  R  L  E  A  K  R  K  R  M  E  K  L  R  V  V  K  D  K  V  D  L  D  E  R  P  E  E  N  G  G  S  N  N  G  P  V  G  N  S  L  P  L  S  Q  G  S  M  A  S  Q  G  S  G  S  S  G  I  S  D  F  G  S  Q  P  I  Q   : G  P  G  D  N  S  T  G  A  N  T  P  T  S  I  K  P  S  E  Q  E  H  E  Q  K  Q  V  A  K  P  P  K  I  T  S  E  K  P  P  T  T  C  N  G  S  A  S  K  E  A  K  E  M  F  K  N  Y  M  L  N  M  P  C  V  S  T  M  G  K  G  P  N  G  K  K  I  E  G  F  L  Y  R  Y  Q  K  G  E  E  V  K  I  M  C  V  C  H  G  N  F  L  S  P  A  E  F  V  K  H  A  G  G  G  D  V  A  N  P  L  K  Q  I  V  V  N  P  S  P  L  L  R  *  C  Q  W  N  S  I  M  T  Q  K  R  G  K  A  S  R  I  Q  L  C  Y  H  R  S  S  S  F  V  T  W  T  K  V  L  F  L  F  S  S  R  *  *  F  L  A  G  Y  C  I  I  N  G  Q  V  Y  P  L  S  V  G  K  K  N  L  R  I  P  I  G  I  Y  L  S  V  I  R  Y  L  E  V  R  I  N  F  S  Y  M  K  G  L  *  S  A  V  G  S  I  S  V  S  T  R  N  V  T  F  E  G  V  V  L  S  A  K  S  N  K  L  D  Q  P  L  L  L  T  V  A  V  S  W  R  *  R  V  V  G  L  L  E  N  F  L  S  A  L  L  S  S  M  R  P  L  F  L  T  I  T  L  V  I  P  C  K  I  Y  *  L  T  M  I  F  C  S  L  Q   : K  N  I  Q   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64350" stop="63747"/>
                    <exon start="62406" stop="62015"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>993</number_coding_nucleotides>
                  <number_encoded_amino_acids>331</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKKLFGVLGFGLFKMAEAEENREKRCFSSMQMEVFSRDLLHKFMNGNNNKFHEIPNEEDELELSLGLSLNGRFGVDPERAKRLKRSSSISNFVFSGGDESNGRCSFSVGPIARTCSLPVEGEEECRKRKELQSLRRLEAKRKRMEKLRVVKDKVDLDERPEENGGSNNGPVGNSLPLSQGSMASQGSGSSGISDFGSQPIQGPGDNSTGANTPTSIKPSEQEHEQKQVAKPPKITSEKPPTTCNGSASKEAKEMFKNYMLNMPCVSTMGKGPNGKKIEGFLYRYQKGEEVKIMCVCHGNFLSPAEFVKHAGGGDVANPLKQIVVNPSPLLR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="75669" PGL_stop="70600"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="75669" e_stop="75515"/>
            <exon e_start="74564" e_stop="74513"/>
            <exon e_start="73952" e_stop="73766"/>
            <exon e_start="72841" e_stop="72544"/>
            <exon e_start="72462" e_stop="72064"/>
            <exon e_start="71799" e_stop="71678"/>
            <exon e_start="71567" e_stop="71502"/>
            <exon e_start="71170" e_stop="71107"/>
            <exon e_start="70971" e_stop="70600"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.330" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.893" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.817" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="75669" e_stop="75515" e_length="155"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.999">
            <gDNA_intron_boundary i_start="75514" i_stop="74565" i_length="950"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="74564" e_stop="74513" e_length="52"/>
          </exon>
          <intron i_serial="2" don_prob="0.330" acc_prob="0.981">
            <gDNA_intron_boundary i_start="74512" i_stop="73953" i_length="560"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="73952" e_stop="73766" e_length="187"/>
          </exon>
          <intron i_serial="3" don_prob="0.893" acc_prob="0.984">
            <gDNA_intron_boundary i_start="73765" i_stop="72842" i_length="924"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="72841" e_stop="72544" e_length="298"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.992">
            <gDNA_intron_boundary i_start="72543" i_stop="72463" i_length="81"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="72462" e_stop="72064" e_length="399"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.817">
            <gDNA_intron_boundary i_start="72063" i_stop="71800" i_length="264"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="71799" e_stop="71678" e_length="122"/>
          </exon>
          <intron i_serial="6" don_prob="0.972" acc_prob="0.998">
            <gDNA_intron_boundary i_start="71677" i_stop="71568" i_length="110"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="71567" e_stop="71502" e_length="66"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="71501" i_stop="71171" i_length="331"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="71170" e_stop="71107" e_length="64"/>
          </exon>
          <intron i_serial="8" don_prob="0.986" acc_prob="0.995">
            <gDNA_intron_boundary i_start="71106" i_stop="70972" i_length="135"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="70971" e_stop="70600" e_length="372"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75669" stop="75515"/>
              <exon start="74564" stop="74513"/>
              <exon start="73952" stop="73766"/>
              <exon start="72841" stop="72624"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201888" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73944" stop="73766"/>
              <exon start="72841" stop="72544"/>
              <exon start="72462" stop="72300"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E373956" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73944" stop="73766"/>
              <exon start="72841" stop="72544"/>
              <exon start="72462" stop="72361"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305675" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73941" stop="73766"/>
              <exon start="72841" stop="72544"/>
              <exon start="72462" stop="72396"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306956" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72343" stop="72064"/>
              <exon start="71799" stop="71678"/>
              <exon start="71567" stop="71502"/>
              <exon start="71170" stop="71107"/>
              <exon start="70971" stop="70940"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210930" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72125" stop="72064"/>
              <exon start="71799" stop="71678"/>
              <exon start="71567" stop="71502"/>
              <exon start="71170" stop="71107"/>
              <exon start="70971" stop="70600"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E373955" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGCTTGCCGACTCCTACTCATATCGTTCACTATTGAAGTTTAGTTTTTGGCTTAATTGTCAGTCCCTTTCATCGGCTTAACTACATAATAATAGTTGCTTCCGTAAAACTCATCAAATCTACAAAAATCTGTCTTCCTTTCGCTTTCTTCTAAG : TGTCTGTCTCCCCATACTTGAGTCGAGGGATAAGGCTGCTTACACACTACAT : AATGGCTATGGAAACTACAGCTATACCTTCTGCCCCTGCTGCACAAGTGATCGGAAATGCTTTTGTTGAGCAGTATTACCAAATTCAACACCACTCCCCAGAGTTGGTATACAGATTTTGTCTGGATTCAAGTGTCTTAAGCCGCCCAAATTCTAATGGCGTGATGACATCCGTGACAACAATGAAA : AATATCAATGACATGATATGCTCATTAGGCTACAAGAATTATAAGGCAGAGATAAAGACTGCAGATGCACAACAGTCCTACAAGGATGGGGTCATTGTATTGGTTACTGGATGCTTAACTGGAAAAGATAACACGAGAAAGCAATTCACCCAGACTTTTTTCCTTGCTCCACAGGACAAAGGCTACTTTGTTTTGAATGATGTTCTTAGGTATGCAGAACAAGTGGAGACTGATAACAGTTCAGAAATGGTTAATGCGGTCAAGGATGTAGCACCCGTGCCTTTGACGCCTGATCCAG : AACCAGTTCATGTGCTTCAGCCTTCGAATCACAGACAGCCTAGCTCTCATGCAGAAGATATAAAAATTGTTGAGGAAGTAGTTCATGGTTCTTTGGAAAATGAGAAGGTAGTTGGTGATGAAAGAGAGATTATGGTGGGTGCTGAATCCCATATTAATGCAGAACCAGCTACTTCAGTTTCCCGAGAAGATGCTCCTAAGAAATCTTATGCTTCAATTGTAAGTTCTCAAACAAAGAAAGGGCCCGCCAAAATCTATGTACCCTCTAATTCAAGAATGGCTCCCGCAAAGACTGAAAAGCAGCCAGTTAAGTCAGTGGCACAAGCTCCTGTTCCTGAATCATCAATTCATACTGCCTCTGGGGGTAATGCATCTGAATCTAAAGATGCTCAGTACAGAG : CTGAGGGACACTCCATTTATATCCGCAATTTGCCTTTAAATGTTACTGTTGCTCAACTTGAGGTTGAATTTAAGAGATTTGGACCCATTATGCAAGGAGGCATACAAGTTAGAAGTAATAGG : CAACAAGGATTCTGCTTCGGGTTTGTTGAATTTGAAGATTTGAACTCCATGAACAGCGCGATACAG : GCCTCACCTGTTACAATTGGAGGTCTTCAAGCTGAGCTTGAAATAAAGCGAACTACAAGTAGAG : TTGGTAGCGGGAGAGGTCGTTTCCCTACCGGAAGAGGAGCAGGGTACCGAAATGAAAATTTCAGGGGCCGCGGAAACTTTAGTGGTGCAGGTAGAGGATATGGTAGAAGTGATTTTAATGGAGGTCGTGGAGGACGAGGTGGTGAAAGTTACCAACAAGGAAGAGGGAGAGGCGGACGGAGAGGTGGCCTAAGCCAAATTCCTTCTTCAGCATAGAAGTTTTATGTTGCAAATTTTGACGGTGTTTCCTTCTTCAGCATAGAAGTTTTGTGTTGCAAATTTTGACCAAGCTTTGTGTTGCCATTGGCACCAACAGGTTAATTGTGCAGTTTAGTTTGATATTTTTCTTATTATACTTTTTTCGTTTTCAATT</gDNA_template>
            <first_frame> K  L  A  D  S  Y  S  Y  R  S  L  L  K  F  S  F  W  L  N  C  Q  S  L  S  S  A  *  L  H  N  N  S  C  F  R  K  T  H  Q  I  Y  K  N  L  S  S  F  R  F  L  L  S :   V  C  L  P  I  L  E  S  R  D  K  A  A  Y  T  L  H  :  N  G  Y  G  N  Y  S  Y  T  F  C  P  C  C  T  S  D  R  K  C  F  C  *  A  V  L  P  N  S  T  P  L  P  R  V  G  I  Q  I  L  S  G  F  K  C  L  K  P  P  K  F  *  W  R  D  D  I  R  D  N  N  E   : K  Y  Q  *  H  D  M  L  I  R  L  Q  E  L  *  G  R  D  K  D  C  R  C  T  T  V  L  Q  G  W  G  H  C  I  G  Y  W  M  L  N  W  K  R  *  H  E  K  A  I  H  P  D  F  F  P  C  S  T  G  Q  R  L  L  C  F  E  *  C  S  *  V  C  R  T  S  G  D  *  *  Q  F  R  N  G  *  C  G  Q  G  C  S  T  R  A  F  D  A  *  S  R :   T  S  S  C  A  S  A  F  E  S  Q  T  A  *  L  S  C  R  R  Y  K  N  C  *  G  S  S  S  W  F  F  G  K  *  E  G  S  W  *  *  K  R  D  Y  G  G  C  *  I  P  Y  *  C  R  T  S  Y  F  S  F  P  R  R  C  S  *  E  I  L  C  F  N  C  K  F  S  N  K  E  R  A  R  Q  N  L  C  T  L  *  F  K  N  G  S  R  K  D  *  K  A  A  S  *  V  S  G  T  S  S  C  S  *  I  I  N  S  Y  C  L  W  G  *  C  I  *  I  *  R  C  S  V  Q  S :   *  G  T  L  H  L  Y  P  Q  F  A  F  K  C  Y  C  C  S  T  *  G  *  I  *  E  I  W  T  H  Y  A  R  R  H  T  S  *  K  *  *   : A  T  R  I  L  L  R  V  C  *  I  *  R  F  E  L  H  E  Q  R  D  T   : G  L  T  C  Y  N  W  R  S  S  S  *  A  *  N  K  A  N  Y  K  *  S :   W  *  R  E  R  S  F  P  Y  R  K  R  S  R  V  P  K  *  K  F  Q  G  P  R  K  L  *  W  C  R  *  R  I  W  *  K  *  F  *  W  R  S  W  R  T  R  W  *  K  L  P  T  R  K  R  E  R  R  T  E  R  W  P  K  P  N  S  F  F  S  I  E  V  L  C  C  K  F  *  R  C  F  L  L  Q  H  R  S  F  V  L  Q  I  L  T  K  L  C  V  A  I  G  T  N  R  L  I  V  Q  F  S  L  I  F  F  L  L  Y  F  F  R  F  Q   </first_frame>
            <second_frame>  S  L  P  T  P  T  H  I  V  H  Y  *  S  L  V  F  G  L  I  V  S  P  F  H  R  L  N  Y  I  I  I  V  A  S  V  K  L  I  K  S  T  K  I  C  L  P  F  A  F  F  *   : V  S  V  S  P  Y  L  S  R  G  I  R  L  L  T  H  Y  I :   M  A  M  E  T  T  A  I  P  S  A  P  A  A  Q  V  I  G  N  A  F  V  E  Q  Y  Y  Q  I  Q  H  H  S  P  E  L  V  Y  R  F  C  L  D  S  S  V  L  S  R  P  N  S  N  G  V  M  T  S  V  T  T  M  K  :  N  I  N  D  M  I  C  S  L  G  Y  K  N  Y  K  A  E  I  K  T  A  D  A  Q  Q  S  Y  K  D  G  V  I  V  L  V  T  G  C  L  T  G  K  D  N  T  R  K  Q  F  T  Q  T  F  F  L  A  P  Q  D  K  G  Y  F  V  L  N  D  V  L  R  Y  A  E  Q  V  E  T  D  N  S  S  E  M  V  N  A  V  K  D  V  A  P  V  P  L  T  P  D  P   : E  P  V  H  V  L  Q  P  S  N  H  R  Q  P  S  S  H  A  E  D  I  K  I  V  E  E  V  V  H  G  S  L  E  N  E  K  V  V  G  D  E  R  E  I  M  V  G  A  E  S  H  I  N  A  E  P  A  T  S  V  S  R  E  D  A  P  K  K  S  Y  A  S  I  V  S  S  Q  T  K  K  G  P  A  K  I  Y  V  P  S  N  S  R  M  A  P  A  K  T  E  K  Q  P  V  K  S  V  A  Q  A  P  V  P  E  S  S  I  H  T  A  S  G  G  N  A  S  E  S  K  D  A  Q  Y  R   : A  E  G  H  S  I  Y  I  R  N  L  P  L  N  V  T  V  A  Q  L  E  V  E  F  K  R  F  G  P  I  M  Q  G  G  I  Q  V  R  S  N  R  :  Q  Q  G  F  C  F  G  F  V  E  F  E  D  L  N  S  M  N  S  A  I  Q  :  A  S  P  V  T  I  G  G  L  Q  A  E  L  E  I  K  R  T  T  S  R   : V  G  S  G  R  G  R  F  P  T  G  R  G  A  G  Y  R  N  E  N  F  R  G  R  G  N  F  S  G  A  G  R  G  Y  G  R  S  D  F  N  G  G  R  G  G  R  G  G  E  S  Y  Q  Q  G  R  G  R  G  G  R  R  G  G  L  S  Q  I  P  S  S  A  *  K  F  Y  V  A  N  F  D  G  V  S  F  F  S  I  E  V  L  C  C  K  F  *  P  S  F  V  L  P  L  A  P  T  G  *  L  C  S  L  V  *  Y  F  S  Y  Y  T  F  F  V  F  N  </second_frame>
            <third_frame>   A  C  R  L  L  L  I  S  F  T  I  E  V  *  F  L  A  *  L  S  V  P  F  I  G  L  T  T  *  *  *  L  L  P  *  N  S  S  N  L  Q  K  S  V  F  L  S  L  S  S  K  :  C  L  S  P  H  T  *  V  E  G  *  G  C  L  H  T  T   : *  W  L  W  K  L  Q  L  Y  L  L  P  L  L  H  K  *  S  E  M  L  L  L  S  S  I  T  K  F  N  T  T  P  Q  S  W  Y  T  D  F  V  W  I  Q  V  S  *  A  A  Q  I  L  M  A  *  *  H  P  *  Q  Q  *  K :   I  S  M  T  *  Y  A  H  *  A  T  R  I  I  R  Q  R  *  R  L  Q  M  H  N  S  P  T  R  M  G  S  L  Y  W  L  L  D  A  *  L  E  K  I  T  R  E  S  N  S  P  R  L  F  S  L  L  H  R  T  K  A  T  L  F  *  M  M  F  L  G  M  Q  N  K  W  R  L  I  T  V  Q  K  W  L  M  R  S  R  M  *  H  P  C  L  *  R  L  I  Q  :  N  Q  F  M  C  F  S  L  R  I  T  D  S  L  A  L  M  Q  K  I  *  K  L  L  R  K  *  F  M  V  L  W  K  M  R  R  *  L  V  M  K  E  R  L  W  W  V  L  N  P  I  L  M  Q  N  Q  L  L  Q  F  P  E  K  M  L  L  R  N  L  M  L  Q  L  *  V  L  K  Q  R  K  G  P  P  K  S  M  Y  P  L  I  Q  E  W  L  P  Q  R  L  K  S  S  Q  L  S  Q  W  H  K  L  L  F  L  N  H  Q  F  I  L  P  L  G  V  M  H  L  N  L  K  M  L  S  T  E  :  L  R  D  T  P  F  I  S  A  I  C  L  *  M  L  L  L  L  N  L  R  L  N  L  R  D  L  D  P  L  C  K  E  A  Y  K  L  E  V  I  G :   N  K  D  S  A  S  G  L  L  N  L  K  I  *  T  P  *  T  A  R  Y  R :   P  H  L  L  Q  L  E  V  F  K  L  S  L  K  *  S  E  L  Q  V  E  :  L  V  A  G  E  V  V  S  L  P  E  E  E  Q  G  T  E  M  K  I  S  G  A  A  E  T  L  V  V  Q  V  E  D  M  V  E  V  I  L  M  E  V  V  E  D  E  V  V  K  V  T  N  K  E  E  G  E  A  D  G  E  V  A  *  A  K  F  L  L  Q  H  R  S  F  M  L  Q  I  L  T  V  F  P  S  S  A  *  K  F  C  V  A  N  F  D  Q  A  L  C  C  H  W  H  Q  Q  V  N  C  A  V  *  F  D  I  F  L  I  I  L  F  S  F  S  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75515" stop="74513"/>
                    <exon start="73952" stop="73766"/>
                    <exon start="72841" stop="72544"/>
                    <exon start="72462" stop="72064"/>
                    <exon start="71799" stop="71678"/>
                    <exon start="71567" stop="71502"/>
                    <exon start="71170" stop="71107"/>
                    <exon start="70971" stop="70757"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1401</number_coding_nucleotides>
                  <number_encoded_amino_acids>467</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VSVSPYLSRGIRLLTHYIMAMETTAIPSAPAAQVIGNAFVEQYYQIQHHSPELVYRFCLDSSVLSRPNSNGVMTSVTTMKNINDMICSLGYKNYKAEIKTADAQQSYKDGVIVLVTGCLTGKDNTRKQFTQTFFLAPQDKGYFVLNDVLRYAEQVETDNSSEMVNAVKDVAPVPLTPDPEPVHVLQPSNHRQPSSHAEDIKIVEEVVHGSLENEKVVGDEREIMVGAESHINAEPATSVSREDAPKKSYASIVSSQTKKGPAKIYVPSNSRMAPAKTEKQPVKSVAQAPVPESSIHTASGGNASESKDAQYRAEGHSIYIRNLPLNVTVAQLEVEFKRFGPIMQGGIQVRSNRQQGFCFGFVEFEDLNSMNSAIQASPVTIGGLQAELEIKRTTSRVGSGRGRFPTGRGAGYRNENFRGRGNFSGAGRGYGRSDFNGGRGGRGGESYQQGRGRGGRRGGLSQIPSSA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="79950" PGL_stop="84469"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="79950" e_stop="80432"/>
            <exon e_start="84227" e_stop="84469"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="79950" e_stop="80432" e_length="483"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.993">
            <gDNA_intron_boundary i_start="80433" i_stop="84226" i_length="3794"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="84227" e_stop="84469" e_length="243"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79950" stop="80432"/>
              <exon start="84227" stop="84405"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80028" stop="80432"/>
              <exon start="84227" stop="84405"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E362305" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80039" stop="80432"/>
              <exon start="84227" stop="84364"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242747" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80053" stop="80432"/>
              <exon start="84227" stop="84469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712325" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80054" stop="80432"/>
              <exon start="84227" stop="84356"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728993" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80054" stop="80432"/>
              <exon start="84227" stop="84356"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733347" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAATGAGCAAGGCGATTTAGGTCCAATTATCCCTACCCAATTTGAAGACATAACATTAAACCGCAAAATCAAACAGATCTCATTGAGCAAATTTCTTCAATGGCTTCGTCAGGGAAATCGATGATCCAAACCCTAAAACGGTTCATGAAGAAGCCATGGGAGTTCACCGGACCTCAAACAAGCCCCGAGTATTTAGACTCTATACCCAAGGCAGCGGAGTACAGAATCTTCTGTCCTGCCACTACCCAATCTCAGGCCATCATCCCCACATCCGATCCTGAAACCGTCTTCGATATCAAGTATTATTCTCGTGACCAGAGGCGTAACCGTCCTCCAATCAAGCGCACTTTCCTCACCAAAGCTGATGTTGAGAAGATGAGGATGGAGTACAAATTTGATGTCAACGATTTTCCTAAGCCTTATTTGACTGCTAAGGTTGAAGAGGATGAAAATGCTATTGGTGGTGGCTACCAGAAATGAAG : GCTTTGTTCTTGTGGCGAAGACTCCACTTGCTGTCAATAATGGTAGCTGATGATGTTTTGCAGTGTCAGCCAAGTGTATTGCATATGTACTCCGTTTTTTAAAAATGTTGAGATATATATTCTTGGAGCAATTTCCTTTGGTTTTAGAGTGATAAGTTTCACCAGTCGAATAATTTTTTTTTTCATTTAGCTTATGCGGATTGTTCCATGTCTTGTGCTTGAAAGAGTGAAAGTTAGTCGAAC</gDNA_template>
            <first_frame> K  M  S  K  A  I  *  V  Q  L  S  L  P  N  L  K  T  *  H  *  T  A  K  S  N  R  S  H  *  A  N  F  F  N  G  F  V  R  E  I  D  D  P  N  P  K  T  V  H  E  E  A  M  G  V  H  R  T  S  N  K  P  R  V  F  R  L  Y  T  Q  G  S  G  V  Q  N  L  L  S  C  H  Y  P  I  S  G  H  H  P  H  I  R  S  *  N  R  L  R  Y  Q  V  L  F  S  *  P  E  A  *  P  S  S  N  Q  A  H  F  P  H  Q  S  *  C  *  E  D  E  D  G  V  Q  I  *  C  Q  R  F  S  *  A  L  F  D  C  *  G  *  R  G  *  K  C  Y  W  W  W  L  P  E  M  K  :  A  L  F  L  W  R  R  L  H  L  L  S  I  M  V  A  D  D  V  L  Q  C  Q  P  S  V  L  H  M  Y  S  V  F  *  K  C  *  D  I  Y  S  W  S  N  F  L  W  F  *  S  D  K  F  H  Q  S  N  N  F  F  F  H  L  A  Y  A  D  C  S  M  S  C  A  *  K  S  E  S  *  S  N </first_frame>
            <second_frame>  K  *  A  R  R  F  R  S  N  Y  P  Y  P  I  *  R  H  N  I  K  P  Q  N  Q  T  D  L  I  E  Q  I  S  S  M  A  S  S  G  K  S  M  I  Q  T  L  K  R  F  M  K  K  P  W  E  F  T  G  P  Q  T  S  P  E  Y  L  D  S  I  P  K  A  A  E  Y  R  I  F  C  P  A  T  T  Q  S  Q  A  I  I  P  T  S  D  P  E  T  V  F  D  I  K  Y  Y  S  R  D  Q  R  R  N  R  P  P  I  K  R  T  F  L  T  K  A  D  V  E  K  M  R  M  E  Y  K  F  D  V  N  D  F  P  K  P  Y  L  T  A  K  V  E  E  D  E  N  A  I  G  G  G  Y  Q  K  *  R :   L  C  S  C  G  E  D  S  T  C  C  Q  *  W  *  L  M  M  F  C  S  V  S  Q  V  Y  C  I  C  T  P  F  F  K  N  V  E  I  Y  I  L  G  A  I  S  F  G  F  R  V  I  S  F  T  S  R  I  I  F  F  F  I  *  L  M  R  I  V  P  C  L  V  L  E  R  V  K  V  S  R   </second_frame>
            <third_frame>   N  E  Q  G  D  L  G  P  I  I  P  T  Q  F  E  D  I  T  L  N  R  K  I  K  Q  I  S  L  S  K  F  L  Q  W  L  R  Q  G  N  R  *  S  K  P  *  N  G  S  *  R  S  H  G  S  S  P  D  L  K  Q  A  P  S  I  *  T  L  Y  P  R  Q  R  S  T  E  S  S  V  L  P  L  P  N  L  R  P  S  S  P  H  P  I  L  K  P  S  S  I  S  S  I  I  L  V  T  R  G  V  T  V  L  Q  S  S  A  L  S  S  P  K  L  M  L  R  R  *  G  W  S  T  N  L  M  S  T  I  F  L  S  L  I  *  L  L  R  L  K  R  M  K  M  L  L  V  V  A  T  R  N  E   : G  F  V  L  V  A  K  T  P  L  A  V  N  N  G  S  *  *  C  F  A  V  S  A  K  C  I  A  Y  V  L  R  F  L  K  M  L  R  Y  I  F  L  E  Q  F  P  L  V  L  E  *  *  V  S  P  V  E  *  F  F  F  S  F  S  L  C  G  L  F  H  V  L  C  L  K  E  *  K  L  V  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79996" stop="80430"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>432</number_coding_nucleotides>
                  <number_encoded_amino_acids>144</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RHNIKPQNQTDLIEQISSMASSGKSMIQTLKRFMKKPWEFTGPQTSPEYLDSIPKAAEYRIFCPATTQSQAIIPTSDPETVFDIKYYSRDQRRNRPPIKRTFLTKADVEKMRMEYKFDVNDFPKPYLTAKVEEDENAIGGGYQK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="85594" PGL_stop="86299"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85594" e_stop="86299"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="85594" e_stop="86299" e_length="706"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85594" stop="86299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544229" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85606" stop="86162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307235" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTAGAGTACGCCATCGGAATGATCTCCGATCAAAACCCTAAACCCCCGTATCAGTTATGCCGCCGATCTAGCTGCTTCTTCCATACGTGAAAAAGAGTAACTCAGAGAACTTGATGCAGTCAGGTTTTCTTAAATTTCTCGCATGTATTCTTTTATAGAAAAATCAAGAACTCTTAAGTTACATTCATATAAAAATAGAAACTGTAGTTTTCTTGAATATATTGGCATTGCAAATATCAAGGAATTTCAAGAAATTAGGTTGTTATTCTCGCAGTGTATGTTAAGTATGTTAAGGATGTTCAAGAATTGAATGGAATGTTGTGGAGTTGTTCTTGAACTCAAAAACAAAAATTAAGTAGTTTAATTATAGGAGTTTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACTTTCAGAAAGGTTTGTGTAATGCAAGAGAATAGAGAATATATGGTTCATCTTTTCTGATTTTGTTAAAACAAAAATTAAGTAGTTTAATTATACGAGTTTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACTTTCATGAAGGTTTGTGTAATGTAAGAGAATAGAGAATATATGGTTCATCTTTTCTGATTTTGTTAAAACAAAAATTAAGTAGTTTAATTATACGAGTGTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACT</gDNA_template>
            <first_frame> L  E  Y  A  I  G  M  I  S  D  Q  N  P  K  P  P  Y  Q  L  C  R  R  S  S  C  F  F  H  T  *  K  R  V  T  Q  R  T  *  C  S  Q  V  F  L  N  F  S  H  V  F  F  Y  R  K  I  K  N  S  *  V  T  F  I  *  K  *  K  L  *  F  S  *  I  Y  W  H  C  K  Y  Q  G  I  S  R  N  *  V  V  I  L  A  V  Y  V  K  Y  V  K  D  V  Q  E  L  N  G  M  L  W  S  C  S  *  T  Q  K  Q  K  L  S  S  L  I  I  G  V  C  D  L  *  *  F  E  *  R  H  S  I  G  Q  T  F  R  K  V  C  V  M  Q  E  N  R  E  Y  M  V  H  L  F  *  F  C  *  N  K  N  *  V  V  *  L  Y  E  F  V  I  C  S  N  L  N  E  D  T  Q  L  D  R  L  S  *  R  F  V  *  C  K  R  I  E  N  I  W  F  I  F  S  D  F  V  K  T  K  I  K  *  F  N  Y  T  S  V  *  F  V  V  I  *  M  K  T  L  N  W  T  D  </first_frame>
            <second_frame>  *  S  T  P  S  E  *  S  P  I  K  T  L  N  P  R  I  S  Y  A  A  D  L  A  A  S  S  I  R  E  K  E  *  L  R  E  L  D  A  V  R  F  S  *  I  S  R  M  Y  S  F  I  E  K  S  R  T  L  K  L  H  S  Y  K  N  R  N  C  S  F  L  E  Y  I  G  I  A  N  I  K  E  F  Q  E  I  R  L  L  F  S  Q  C  M  L  S  M  L  R  M  F  K  N  *  M  E  C  C  G  V  V  L  E  L  K  N  K  N  *  V  V  *  L  *  E  F  V  I  C  S  N  L  N  E  D  T  Q  L  D  R  L  S  E  R  F  V  *  C  K  R  I  E  N  I  W  F  I  F  S  D  F  V  K  T  K  I  K  *  F  N  Y  T  S  L  *  F  V  V  I  *  M  K  T  L  N  W  T  D  F  H  E  G  L  C  N  V  R  E  *  R  I  Y  G  S  S  F  L  I  L  L  K  Q  K  L  S  S  L  I  I  R  V  C  D  L  *  *  F  E  *  R  H  S  I  G  Q  T </second_frame>
            <third_frame>   R  V  R  H  R  N  D  L  R  S  K  P  *  T  P  V  S  V  M  P  P  I  *  L  L  L  P  Y  V  K  K  S  N  S  E  N  L  M  Q  S  G  F  L  K  F  L  A  C  I  L  L  *  K  N  Q  E  L  L  S  Y  I  H  I  K  I  E  T  V  V  F  L  N  I  L  A  L  Q  I  S  R  N  F  K  K  L  G  C  Y  S  R  S  V  C  *  V  C  *  G  C  S  R  I  E  W  N  V  V  E  L  F  L  N  S  K  T  K  I  K  *  F  N  Y  R  S  L  *  F  V  V  I  *  M  K  T  L  N  W  T  D  F  Q  K  G  L  C  N  A  R  E  *  R  I  Y  G  S  S  F  L  I  L  L  K  Q  K  L  S  S  L  I  I  R  V  C  D  L  *  *  F  E  *  R  H  S  I  G  Q  T  F  M  K  V  C  V  M  *  E  N  R  E  Y  M  V  H  L  F  *  F  C  *  N  K  N  *  V  V  *  L  Y  E  C  V  I  C  S  N  L  N  E  D  T  Q  L  D  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0236E08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="88625" PGL_stop="95456"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88625" e_stop="88722"/>
            <exon e_start="88833" e_stop="88881"/>
            <exon e_start="89028" e_stop="89108"/>
            <exon e_start="89661" e_stop="89711"/>
            <exon e_start="90827" e_stop="91019"/>
            <exon e_start="91108" e_stop="91235"/>
            <exon e_start="91316" e_stop="91409"/>
            <exon e_start="92047" e_stop="92799"/>
            <exon e_start="92902" e_stop="93057"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.898" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.446" e_score="1.000"/>
          <exon-intron don_prob="0.949" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.885" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.966" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.514" acc_prob="0.637" e_score="0.999"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="88625" e_stop="88722" e_length="98"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.972">
            <gDNA_intron_boundary i_start="88723" i_stop="88832" i_length="110"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="88833" e_stop="88881" e_length="49"/>
          </exon>
          <intron i_serial="2" don_prob="0.992" acc_prob="0.980">
            <gDNA_intron_boundary i_start="88882" i_stop="89027" i_length="146"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="89028" e_stop="89108" e_length="81"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.898">
            <gDNA_intron_boundary i_start="89109" i_stop="89660" i_length="552"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="89661" e_stop="89711" e_length="51"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.446">
            <gDNA_intron_boundary i_start="89712" i_stop="90826" i_length="1115"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="90827" e_stop="91019" e_length="193"/>
          </exon>
          <intron i_serial="5" don_prob="0.949" acc_prob="0.983">
            <gDNA_intron_boundary i_start="91020" i_stop="91107" i_length="88"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="91108" e_stop="91235" e_length="128"/>
          </exon>
          <intron i_serial="6" don_prob="0.885" acc_prob="0.964">
            <gDNA_intron_boundary i_start="91236" i_stop="91315" i_length="80"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="91316" e_stop="91409" e_length="94"/>
          </exon>
          <intron i_serial="7" don_prob="0.966" acc_prob="0.983">
            <gDNA_intron_boundary i_start="91410" i_stop="92046" i_length="637"/>
          </intron>
          <exon e_serial="8" e_score="0.999">
            <gDNA_exon_boundary e_start="92047" e_stop="92799" e_length="753"/>
          </exon>
          <intron i_serial="8" don_prob="0.514" acc_prob="0.637">
            <gDNA_intron_boundary i_start="92800" i_stop="92901" i_length="102"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="92902" e_stop="93057" e_length="156"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88625" stop="88722"/>
              <exon start="88833" stop="88881"/>
              <exon start="89028" stop="89108"/>
              <exon start="89661" stop="89711"/>
              <exon start="90827" stop="91019"/>
              <exon start="91108" stop="91235"/>
              <exon start="91316" stop="91401"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538636" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88631" stop="88722"/>
              <exon start="88833" stop="88881"/>
              <exon start="89028" stop="89108"/>
              <exon start="89661" stop="89711"/>
              <exon start="90827" stop="91019"/>
              <exon start="91108" stop="91231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272165" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88642" stop="88722"/>
              <exon start="88833" stop="88881"/>
              <exon start="89028" stop="89108"/>
              <exon start="89661" stop="89711"/>
              <exon start="90827" stop="91019"/>
              <exon start="91108" stop="91180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243034" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88844" stop="88881"/>
              <exon start="89028" stop="89108"/>
              <exon start="89661" stop="89711"/>
              <exon start="90827" stop="91019"/>
              <exon start="91108" stop="91235"/>
              <exon start="91316" stop="91409"/>
              <exon start="92047" stop="92269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264191" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91379" stop="91409"/>
              <exon start="92047" stop="92769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332667" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91379" stop="91409"/>
              <exon start="92047" stop="92763"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332553" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91379" stop="91409"/>
              <exon start="92047" stop="92684"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334044" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92054" stop="92700"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257256" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92282" stop="92799"/>
              <exon start="92902" stop="92968"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392437" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92283" stop="92799"/>
              <exon start="92902" stop="93044"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369255" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92283" stop="92799"/>
              <exon start="92902" stop="92941"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249077" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92344" stop="92799"/>
              <exon start="92902" stop="93054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392419" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92345" stop="92799"/>
              <exon start="92902" stop="93057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247894" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGTTCACAGGGTTCAAAATCGCATATGGGTGTACCATGCGTCTTGGATCAAGAAGAACGTATTTTAGAGTCAAAGATTCTAAATCTGTAAAACTATCA : ATGTCGCAACCGGAGCTTTGTTGATGAAAGGCACCGTCATAGATATGAG : GTGAATCTTGATATGGTGCAGAAATTTGAAGATGCTTGTCTTTCTTTCCCTGGCAAAGATGAAAGTGATCGGTACATGGAG : GTAATGTTGCAATAGGAATTGGGACCTGCTATGTTAAGGTGGATGACAATG : GGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAG : AAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAG : GCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAG : ATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAA : GTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGTATG</gDNA_template>
            <first_frame> S  S  Q  G  S  K  S  H  M  G  V  P  C  V  L  D  Q  E  E  R  I  L  E  S  K  I  L  N  L  *  N  Y  Q :   C  R  N  R  S  F  V  D  E  R  H  R  H  R  Y  E  :  V  N  L  D  M  V  Q  K  F  E  D  A  C  L  S  F  P  G  K  D  E  S  D  R  Y  M  E  :  V  M  L  Q  *  E  L  G  P  A  M  L  R  W  M  T  M  :  G  G  W  G  L  T  *  M  D  *  C  L  K  S  R  *  N  R  *  V  L  Q  G  R  R  S  H  T  T  L  P  F  Y  H  G  K  K  F  F  A  T  S  E  S  S  R  K  A  E  G  N  N  N  I  K  T  V  H  D  V  L  L  M  P   : E  T  R  T  V  R  R  L  H  H  S  T  E  A  I  W  L  E  L  P  R  Q  S  *  V  I  P  S  M  *  L  I  F  N  P  *  Q  C  I  F  *  W  K  :  A  K  C  E  N  G  T  C  Q  H  L  K  *  Q  L  Q  A  Q  G  E  C  S  S  T  H  N  G  E  S  K  E   : D  I  L  L  *  T  G  L  G  S  Y  Q  W  H  V  I  Y  L  L  E  M  L  L  I  P  V  Q  H  F  Y  F  V  F  H  M  *  V  K  R  G  V  V  *  I  I  I  S  K  M  K  I  K  R  S  L  N  V  G  I  Y  R  P  *  A  D  F  S  K  *  C  F  T  I  K  L  E  K  D  *  A  S  D  V  L  M  K  W  C  T  E  E  C  T  G  R  S  E  I  R  S  S  Q  I  I  R  W  G  C  A  S  E  K  H  D  P  E  S  R  F  L  C  Q  I  I  R  S  S  L  S  I  D  F  S  L  A  H  *  Q  L  V  *  T  G  N  P  E  T  L  R  T  P  I  H  L  M  F  F  L  R  M  V  I  S  W  I  I  N  S  V  L  Q  V  A  S  S  S  C  R  S  D  F  L  L  I  S  R  R  E  E  S  L  T  I  V  A  G  R  S  T  E  N  V  S  F  K  E  S  L  V  L  D  N  S  S  N  V  K  H  E  R  R  K  P  F  M  Q  S  G  S  L  R  R  S  L  T  H  D  E  S  S  F  D  S  Y  E  D  I  K  F  E  K   : S  K  E  I  *  F  E  K  F  C  W  G  K  T  K  S  K  A  L  Q  S  Q  N  R  F  R  K  V  C  I  N  Q  D  I  L  E  E  Y  D  H  R  M  D  F  F  E  Q  T  A  E  M  Y  </first_frame>
            <second_frame>  V  H  R  V  Q  N  R  I  W  V  Y  H  A  S  W  I  K  K  N  V  F  *  S  Q  R  F  *  I  C  K  T  I   : N  V  A  T  G  A  L  L  M  K  G  T  V  I  D  M  R :   *  I  L  I  W  C  R  N  L  K  M  L  V  F  L  S  L  A  K  M  K  V  I  G  T  W  R :   *  C  C  N  R  N  W  D  L  L  C  *  G  G  *  Q  W :   V  D  G  D  S  H  K  W  I  D  A  *  N  R  G  K  T  D  K  S  Y  K  E  E  E  V  I  Q  L  F  H  F  T  M  A  R  S  S  L  P  R  V  S  L  Q  E  R  Q  K  E  I  I  I  L  R  Q  F  M  M  C  Y  S  C  Q  :  K  L  E  L  *  G  D  C  I  I  L  Q  K  L  S  G  W  S  F  H  D  S  H  E  S  S  H  Q  C  D  *  S  S  T  H  D  S  V  F  S  D  G  R :   P  S  V  K  M  E  P  V  N  I  *  N  N  N  Y  K  L  K  G  S  A  Q  V  R  T  M  G  S  Q  K  K  :  I  F  C  Y  E  L  D  *  E  A  I  N  G  M  L  F  I  C  *  K  C  C  S  S  Q  F  N  I  S  T  L  C  S  I  C  R  L  R  E  E  *  F  E  L  L  S  Q  K  *  K  *  K  E  V  *  M  L  V  Y  T  V  L  K  L  T  F  L  N  D  A  S  Q  S  S  *  K  K  T  K  Q  V  M  S  *  *  N  G  A  L  K  S  A  L  A  G  V  R  F  D  L  H  R  L  F  G  G  D  V  L  L  K  S  M  I  L  S  P  D  S  S  V  K  S  Y  V  Q  V  C  Q  L  I  S  L  L  L  I  D  S  W  C  E  L  E  I  Q  K  R  C  A  H  P  F  I  *  C  F  S  *  G  W  *  F  P  G  *  *  I  Q  C  F  R  *  L  A  P  V  V  D  Q  T  S  C  *  F  P  D  G  R  N  L  *  Q  L  *  L  A  D  Q  Q  R  M  S  H  L  R  N  L  L  Y  L  I  T  V  Q  M  *  S  M  R  E  G  N  H  L  C  R  A  V  L  C  A  E  A  S  H  M  M  N  H  L  L  I  V  M  K  I  L  S  L  K  K  :  V  R  K  Y  D  L  R  S  F  A  G  A  K  L  R  A  R  H  C  R  V  K  I  D  S  E  K  S  A  L  T  R  T  F  *  K  N  T  I  I  G  W  T  S  L  N  R  L  L  K  C  M </second_frame>
            <third_frame>   F  T  G  F  K  I  A  Y  G  C  T  M  R  L  G  S  R  R  T  Y  F  R  V  K  D  S  K  S  V  K  L  S  :  M  S  Q  P  E  L  C  *  *  K  A  P  S  *  I  *   : G  E  S  *  Y  G  A  E  I  *  R  C  L  S  F  F  P  W  Q  R  *  K  *  S  V  H  G   : G  N  V  A  I  G  I  G  T  C  Y  V  K  V  D  D  N   : G  W  M  G  T  H  I  N  G  L  M  L  E  I  E  V  K  Q  I  S  L  T  R  K  K  K  S  Y  N  S  S  I  L  P  W  Q  E  V  L  C  H  E  *  V  F  K  K  G  R  R  K  *  *  Y  *  D  S  S  *  C  V  T  H  A  R :   N  *  N  C  K  E  T  A  S  F  Y  R  S  Y  L  A  G  A  S  T  T  V  M  S  H  P  I  N  V  I  N  L  Q  P  M  T  V  Y  F  L  M  E   : G  Q  V  *  K  W  N  L  S  T  S  E  I  T  I  T  S  S  R  G  V  L  K  Y  A  Q  W  G  V  K  R  R :   Y  F  A  M  N  W  I  R  K  L  S  M  A  C  Y  L  F  V  R  N  A  A  H  P  S  S  T  F  L  L  C  V  P  Y  V  G  *  E  R  S  S  L  N  Y  Y  L  K  N  E  N  K  K  K  F  E  C  W  Y  I  P  S  L  S  *  L  F  *  M  M  L  H  N  Q  A  R  K  R  L  S  K  *  C  P  N  E  M  V  H  *  R  V  H  W  Q  E  *  D  S  I  F  T  D  Y  S  V  G  M  C  F  *  K  A  *  S  *  V  Q  I  P  L  S  N  H  T  F  K  S  V  N  *  F  L  S  C  S  L  T  V  G  V  N  W  K  S  R  N  A  A  H  T  H  S  S  N  V  F  P  K  D  G  D  F  L  D  N  K  F  S  A  S  G  S  *  L  Q  L  *  I  R  L  P  V  N  F  Q  T  G  G  I  F  N  N  C  S  W  Q  I  N  R  E  C  L  I  *  G  I  S  C  T  *  *  Q  F  K  C  K  A  *  E  K  E  T  I  Y  A  E  R  F  F  A  Q  K  P  H  T  *  *  I  I  F  *  *  L  *  R  Y  *  V  *  K  K :   *  G  N  M  I  *  E  V  L  L  G  Q  N  *  E  Q  G  I  A  E  S  K  *  I  Q  K  S  L  H  *  P  G  H  S  R  R  I  R  S  S  D  G  L  L  *  T  D  C  *  N  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92469" stop="92799"/>
                    <exon start="92902" stop="92915"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>342</number_coding_nucleotides>
                  <number_encoded_amino_acids>114</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TGNPETLRTPIHLMFFLRMVISWIINSVLQVASSSCRSDFLLISRREESLTIVAGRSTENVSFKESLVLDNSSNVKHERRKPFMQSGSLRRSLTHDESSFDSYEDIKFEKSKEI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90884" stop="91019"/>
                    <exon start="91108" stop="91178"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLQGRRSHTTLPFYHGKKFFATSESSRKAEGNNNIKTVHDVLLMPETRTVRRLHHSTEAIWLELPRQS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91327" stop="91409"/>
                    <exon start="92047" stop="92158"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KWNLSTSEITITSSRGVLKYAQWGVKRRYFAMNWIRKLSMACYLFVRNAAHPSSTFLLCVPYVG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="88625" e_stop="88722"/>
            <exon e_start="88833" e_stop="88881"/>
            <exon e_start="89028" e_stop="89108"/>
            <exon e_start="89661" e_stop="89711"/>
            <exon e_start="90827" e_stop="91019"/>
            <exon e_start="91108" e_stop="91235"/>
            <exon e_start="91316" e_stop="91409"/>
            <exon e_start="93473" e_stop="93677"/>
            <exon e_start="93767" e_stop="93882"/>
            <exon e_start="93986" e_stop="94081"/>
            <exon e_start="95209" e_stop="95456"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.898" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.446" e_score="1.000"/>
          <exon-intron don_prob="0.949" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.885" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.966" acc_prob="0.431" e_score="1.000"/>
          <exon-intron don_prob="0.886" acc_prob="0.900" e_score="1.000"/>
          <exon-intron don_prob="0.863" acc_prob="0.945" e_score="1.000"/>
          <exon-intron don_prob="0.954" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.948"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="88625" e_stop="88722" e_length="98"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.972">
            <gDNA_intron_boundary i_start="88723" i_stop="88832" i_length="110"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="88833" e_stop="88881" e_length="49"/>
          </exon>
          <intron i_serial="2" don_prob="0.992" acc_prob="0.980">
            <gDNA_intron_boundary i_start="88882" i_stop="89027" i_length="146"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="89028" e_stop="89108" e_length="81"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.898">
            <gDNA_intron_boundary i_start="89109" i_stop="89660" i_length="552"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="89661" e_stop="89711" e_length="51"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.446">
            <gDNA_intron_boundary i_start="89712" i_stop="90826" i_length="1115"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="90827" e_stop="91019" e_length="193"/>
          </exon>
          <intron i_serial="5" don_prob="0.949" acc_prob="0.983">
            <gDNA_intron_boundary i_start="91020" i_stop="91107" i_length="88"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="91108" e_stop="91235" e_length="128"/>
          </exon>
          <intron i_serial="6" don_prob="0.885" acc_prob="0.964">
            <gDNA_intron_boundary i_start="91236" i_stop="91315" i_length="80"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="91316" e_stop="91409" e_length="94"/>
          </exon>
          <intron i_serial="7" don_prob="0.966" acc_prob="0.431">
            <gDNA_intron_boundary i_start="91410" i_stop="93472" i_length="2063"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="93473" e_stop="93677" e_length="205"/>
          </exon>
          <intron i_serial="8" don_prob="0.886" acc_prob="0.900">
            <gDNA_intron_boundary i_start="93678" i_stop="93766" i_length="89"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="93767" e_stop="93882" e_length="116"/>
          </exon>
          <intron i_serial="9" don_prob="0.863" acc_prob="0.945">
            <gDNA_intron_boundary i_start="93883" i_stop="93985" i_length="103"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="93986" e_stop="94081" e_length="96"/>
          </exon>
          <intron i_serial="10" don_prob="0.954" acc_prob="1.000">
            <gDNA_intron_boundary i_start="94082" i_stop="95208" i_length="1127"/>
          </intron>
          <exon e_serial="11" e_score="0.948">
            <gDNA_exon_boundary e_start="95209" e_stop="95456" e_length="248"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88625" stop="88722"/>
              <exon start="88833" stop="88881"/>
              <exon start="89028" stop="89108"/>
              <exon start="89661" stop="89711"/>
              <exon start="90827" stop="91019"/>
              <exon start="91108" stop="91235"/>
              <exon start="91316" stop="91409"/>
              <exon start="93473" stop="93531"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538629" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88625" stop="88722"/>
              <exon start="88833" stop="88881"/>
              <exon start="89028" stop="89108"/>
              <exon start="89661" stop="89711"/>
              <exon start="90827" stop="91019"/>
              <exon start="91108" stop="91235"/>
              <exon start="91316" stop="91401"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538636" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88631" stop="88722"/>
              <exon start="88833" stop="88881"/>
              <exon start="89028" stop="89108"/>
              <exon start="89661" stop="89711"/>
              <exon start="90827" stop="91019"/>
              <exon start="91108" stop="91231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272165" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88642" stop="88722"/>
              <exon start="88833" stop="88881"/>
              <exon start="89028" stop="89108"/>
              <exon start="89661" stop="89711"/>
              <exon start="90827" stop="91019"/>
              <exon start="91108" stop="91180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243034" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90958" stop="91019"/>
              <exon start="91108" stop="91235"/>
              <exon start="91316" stop="91409"/>
              <exon start="93473" stop="93652"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242325" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91011" stop="91019"/>
              <exon start="91108" stop="91235"/>
              <exon start="91316" stop="91409"/>
              <exon start="93473" stop="93677"/>
              <exon start="93767" stop="93878"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266998" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91170" stop="91235"/>
              <exon start="91316" stop="91409"/>
              <exon start="93473" stop="93677"/>
              <exon start="93767" stop="93882"/>
              <exon start="93986" stop="94081"/>
              <exon start="95209" stop="95456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549008" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91191" stop="91235"/>
              <exon start="91316" stop="91409"/>
              <exon start="93473" stop="93677"/>
              <exon start="93767" stop="93882"/>
              <exon start="93986" stop="94081"/>
              <exon start="95209" stop="95407"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538633" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91225" stop="91235"/>
              <exon start="91316" stop="91409"/>
              <exon start="93473" stop="93677"/>
              <exon start="93767" stop="93882"/>
              <exon start="93986" stop="94081"/>
              <exon start="95209" stop="95289"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254591" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91225" stop="91235"/>
              <exon start="91316" stop="91409"/>
              <exon start="93473" stop="93677"/>
              <exon start="93767" stop="93882"/>
              <exon start="93986" stop="94031"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262579" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93514" stop="93677"/>
              <exon start="93767" stop="93882"/>
              <exon start="93986" stop="94081"/>
              <exon start="95209" stop="95400"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548087" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93616" stop="93677"/>
              <exon start="93767" stop="93882"/>
              <exon start="93986" stop="94081"/>
              <exon start="95209" stop="95367"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392436" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGTTCACAGGGTTCAAAATCGCATATGGGTGTACCATGCGTCTTGGATCAAGAAGAACGTATTTTAGAGTCAAAGATTCTAAATCTGTAAAACTATCA : ATGTCGCAACCGGAGCTTTGTTGATGAAAGGCACCGTCATAGATATGAG : GTGAATCTTGATATGGTGCAGAAATTTGAAGATGCTTGTCTTTCTTTCCCTGGCAAAGATGAAAGTGATCGGTACATGGAG : GTAATGTTGCAATAGGAATTGGGACCTGCTATGTTAAGGTGGATGACAATG : GGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAG : AAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAG : GCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAG : GGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG : AAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCAAGTTGTGGTGACTGTGTATTCTCTGATGAAAG : GCCAAGTATGAAAATGAAACTAGCTAACATCTGGAATAACAAATTACAAGCTCAAAGGGGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG : GTTCTGTGTAGCTGGGGTGTTGGGGCATCTCCAATCCAAACACCTAATTTTACACCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAACCTACTGCATCGAAAAATAATTTATTTTCTCTCATTATTATTATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAACATTTTCTTTCTATGGTTCTCCTTTTATAATCGTTTAATATAAAATTATTTTGTATCATAATTTTTTA</gDNA_template>
            <first_frame> S  S  Q  G  S  K  S  H  M  G  V  P  C  V  L  D  Q  E  E  R  I  L  E  S  K  I  L  N  L  *  N  Y  Q :   C  R  N  R  S  F  V  D  E  R  H  R  H  R  Y  E  :  V  N  L  D  M  V  Q  K  F  E  D  A  C  L  S  F  P  G  K  D  E  S  D  R  Y  M  E  :  V  M  L  Q  *  E  L  G  P  A  M  L  R  W  M  T  M  :  G  G  W  G  L  T  *  M  D  *  C  L  K  S  R  *  N  R  *  V  L  Q  G  R  R  S  H  T  T  L  P  F  Y  H  G  K  K  F  F  A  T  S  E  S  S  R  K  A  E  G  N  N  N  I  K  T  V  H  D  V  L  L  M  P   : E  T  R  T  V  R  R  L  H  H  S  T  E  A  I  W  L  E  L  P  R  Q  S  *  V  I  P  S  M  *  L  I  F  N  P  *  Q  C  I  F  *  W  K  :  A  K  C  E  N  G  T  C  Q  H  L  K  *  Q  L  Q  A  Q  G  E  C  S  S  T  H  N  G  E  S  K  E   : G  W  M  E  L  G  *  M  D  *  Y  G  K  S  R  *  N  R  *  A  Y  R  M  K  R  I  R  R  S  H  S  A  H  P  F  Y  Q  S  M  E  K  F  F  A  T  N  E  S  S  R  K  A  A  V  N  N  I  Y  C  D  C  S  *  C  A  T  Y  A  R :   N  Y  S  D  K  E  S  A  A  F  C  R  S  Y  L  L  G  A  S  T  S  M  *  S  I  F  T  Q  V  V  V  T  V  Y  S  L  M  K   : G  Q  V  *  K  *  N  *  L  T  S  G  I  T  N  Y  K  L  K  G  E  C  T  S  T  L  N  G  D  S  K  E   : G  S  V  *  L  G  C  W  G  I  S  N  P  N  T  *  F  Y  T  K  F  G  V  N  Q  I  Y  C  N  Q  L  Q  P  T  A  S  K  N  N  L  F  S  L  I  I  I  I  I  I  F  Y  F  I  Y  I  F  L  F  H  K  T  F  S  F  Y  G  S  P  F  I  I  V  *  Y  K  I  I  L  Y  H  N  F  L </first_frame>
            <second_frame>  V  H  R  V  Q  N  R  I  W  V  Y  H  A  S  W  I  K  K  N  V  F  *  S  Q  R  F  *  I  C  K  T  I   : N  V  A  T  G  A  L  L  M  K  G  T  V  I  D  M  R :   *  I  L  I  W  C  R  N  L  K  M  L  V  F  L  S  L  A  K  M  K  V  I  G  T  W  R :   *  C  C  N  R  N  W  D  L  L  C  *  G  G  *  Q  W :   V  D  G  D  S  H  K  W  I  D  A  *  N  R  G  K  T  D  K  S  Y  K  E  E  E  V  I  Q  L  F  H  F  T  M  A  R  S  S  L  P  R  V  S  L  Q  E  R  Q  K  E  I  I  I  L  R  Q  F  M  M  C  Y  S  C  Q  :  K  L  E  L  *  G  D  C  I  I  L  Q  K  L  S  G  W  S  F  H  D  S  H  E  S  S  H  Q  C  D  *  S  S  T  H  D  S  V  F  S  D  G  R :   P  S  V  K  M  E  P  V  N  I  *  N  N  N  Y  K  L  K  G  S  A  Q  V  R  T  M  G  S  Q  K  K  :  G  G  W  N  S  G  K  W  I  D  T  G  N  Q  G  K  T  D  E  L  I  G  *  R  G  S  E  E  V  I  Q  L  I  H  F  T  K  A  W  R  S  F  L  P  Q  M  S  L  Q  E  K  Q  Q  *  I  T  Y  I  V  T  V  R  D  V  P  L  M  P   : E  T  T  A  I  R  R  V  Q  H  S  A  E  A  I  C  S  E  L  P  H  L  C  N  Q  S  S  P  K  L  W  *  L  C  I  L  *  *  K  :  A  K  Y  E  N  E  T  S  *  H  L  E  *  Q  I  T  S  S  K  G  S  V  Q  V  H  S  M  G  I  Q  K  K  :  V  L  C  S  W  G  V  G  A  S  P  I  Q  T  P  N  F  T  P  N  L  V  L  T  K  F  T  V  I  N  S  N  L  L  H  R  K  I  I  Y  F  L  S  L  L  L  L  L  F  F  I  S  F  I  F  F  Y  F  I  K  H  F  L  S  M  V  L  L  L  *  S  F  N  I  K  L  F  C  I  I  I  F   </second_frame>
            <third_frame>   F  T  G  F  K  I  A  Y  G  C  T  M  R  L  G  S  R  R  T  Y  F  R  V  K  D  S  K  S  V  K  L  S  :  M  S  Q  P  E  L  C  *  *  K  A  P  S  *  I  *   : G  E  S  *  Y  G  A  E  I  *  R  C  L  S  F  F  P  W  Q  R  *  K  *  S  V  H  G   : G  N  V  A  I  G  I  G  T  C  Y  V  K  V  D  D  N   : G  W  M  G  T  H  I  N  G  L  M  L  E  I  E  V  K  Q  I  S  L  T  R  K  K  K  S  Y  N  S  S  I  L  P  W  Q  E  V  L  C  H  E  *  V  F  K  K  G  R  R  K  *  *  Y  *  D  S  S  *  C  V  T  H  A  R :   N  *  N  C  K  E  T  A  S  F  Y  R  S  Y  L  A  G  A  S  T  T  V  M  S  H  P  I  N  V  I  N  L  Q  P  M  T  V  Y  F  L  M  E   : G  Q  V  *  K  W  N  L  S  T  S  E  I  T  I  T  S  S  R  G  V  L  K  Y  A  Q  W  G  V  K  R  R :   V  D  G  T  R  V  N  G  L  I  R  E  I  K  V  K  Q  M  S  L  *  D  E  E  D  Q  K  K  S  F  S  S  S  I  L  P  K  H  G  E  V  F  C  H  K  *  V  F  K  K  S  S  S  K  *  H  I  L  *  L  F  V  M  C  H  L  C  Q  :  K  L  Q  R  *  G  E  C  S  I  L  Q  K  L  S  A  R  S  F  H  I  Y  V  I  N  L  H  P  S  C  G  D  C  V  F  S  D  E  R :   P  S  M  K  M  K  L  A  N  I  W  N  N  K  L  Q  A  Q  R  G  V  Y  K  Y  T  Q  W  G  F  K  R  R :   F  C  V  A  G  V  L  G  H  L  Q  S  K  H  L  I  L  H  Q  I  W  C  *  P  N  L  L  *  S  T  P  T  Y  C  I  E  K  *  F  I  F  S  H  Y  Y  Y  Y  Y  F  L  F  H  L  Y  F  F  I  S  *  N  I  F  F  L  W  F  S  F  Y  N  R  L  I  *  N  Y  F  V  S  *  F  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94025" stop="94081"/>
                    <exon start="95209" stop="95418"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>264</number_coding_nucleotides>
                  <number_encoded_amino_acids>88</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QITSSKGSVQVHSMGIQKKVLCSWGVGASPIQTPNFTPNLVLTKFTVINSNLLHRKIIYFLSLLLLLFFISFIFFYFIKHFLSMVLLL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93782" stop="93882"/>
                    <exon start="93986" stop="94081"/>
                    <exon start="95209" stop="95278"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>264</number_coding_nucleotides>
                  <number_encoded_amino_acids>88</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GECSILQKLSARSFHIYVINLHPSCGDCVFSDERPSMKMKLANIWNNKLQAQRGVYKYTQWGFKRRFCVAGVLGHLQSKHLILHQIWC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90884" stop="91019"/>
                    <exon start="91108" stop="91178"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLQGRRSHTTLPFYHGKKFFATSESSRKAEGNNNIKTVHDVLLMPETRTVRRLHHSTEAIWLELPRQS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="90814" e_stop="91019"/>
            <exon e_start="91108" e_stop="91235"/>
            <exon e_start="91316" e_stop="91409"/>
            <exon e_start="93473" e_stop="93677"/>
            <exon e_start="93767" e_stop="93882"/>
            <exon e_start="93986" e_stop="94081"/>
            <exon e_start="95209" e_stop="95456"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.949" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.885" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.966" acc_prob="0.431" e_score="1.000"/>
          <exon-intron don_prob="0.886" acc_prob="0.900" e_score="1.000"/>
          <exon-intron don_prob="0.863" acc_prob="0.945" e_score="1.000"/>
          <exon-intron don_prob="0.954" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.948"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="90814" e_stop="91019" e_length="206"/>
          </exon>
          <intron i_serial="1" don_prob="0.949" acc_prob="0.983">
            <gDNA_intron_boundary i_start="91020" i_stop="91107" i_length="88"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="91108" e_stop="91235" e_length="128"/>
          </exon>
          <intron i_serial="2" don_prob="0.885" acc_prob="0.964">
            <gDNA_intron_boundary i_start="91236" i_stop="91315" i_length="80"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="91316" e_stop="91409" e_length="94"/>
          </exon>
          <intron i_serial="3" don_prob="0.966" acc_prob="0.431">
            <gDNA_intron_boundary i_start="91410" i_stop="93472" i_length="2063"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="93473" e_stop="93677" e_length="205"/>
          </exon>
          <intron i_serial="4" don_prob="0.886" acc_prob="0.900">
            <gDNA_intron_boundary i_start="93678" i_stop="93766" i_length="89"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="93767" e_stop="93882" e_length="116"/>
          </exon>
          <intron i_serial="5" don_prob="0.863" acc_prob="0.945">
            <gDNA_intron_boundary i_start="93883" i_stop="93985" i_length="103"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="93986" e_stop="94081" e_length="96"/>
          </exon>
          <intron i_serial="6" don_prob="0.954" acc_prob="1.000">
            <gDNA_intron_boundary i_start="94082" i_stop="95208" i_length="1127"/>
          </intron>
          <exon e_serial="7" e_score="0.948">
            <gDNA_exon_boundary e_start="95209" e_stop="95456" e_length="248"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90814" stop="91019"/>
              <exon start="91108" stop="91235"/>
              <exon start="91316" stop="91409"/>
              <exon start="93473" stop="93590"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256214" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90814" stop="91019"/>
              <exon start="91108" stop="91235"/>
              <exon start="91316" stop="91409"/>
              <exon start="93473" stop="93513"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257691" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90814" stop="91019"/>
              <exon start="91108" stop="91235"/>
              <exon start="91316" stop="91409"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258009" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90958" stop="91019"/>
              <exon start="91108" stop="91235"/>
              <exon start="91316" stop="91409"/>
              <exon start="93473" stop="93652"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242325" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91011" stop="91019"/>
              <exon start="91108" stop="91235"/>
              <exon start="91316" stop="91409"/>
              <exon start="93473" stop="93677"/>
              <exon start="93767" stop="93878"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266998" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91170" stop="91235"/>
              <exon start="91316" stop="91409"/>
              <exon start="93473" stop="93677"/>
              <exon start="93767" stop="93882"/>
              <exon start="93986" stop="94081"/>
              <exon start="95209" stop="95456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549008" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91191" stop="91235"/>
              <exon start="91316" stop="91409"/>
              <exon start="93473" stop="93677"/>
              <exon start="93767" stop="93882"/>
              <exon start="93986" stop="94081"/>
              <exon start="95209" stop="95407"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538633" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91225" stop="91235"/>
              <exon start="91316" stop="91409"/>
              <exon start="93473" stop="93677"/>
              <exon start="93767" stop="93882"/>
              <exon start="93986" stop="94081"/>
              <exon start="95209" stop="95289"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254591" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91225" stop="91235"/>
              <exon start="91316" stop="91409"/>
              <exon start="93473" stop="93677"/>
              <exon start="93767" stop="93882"/>
              <exon start="93986" stop="94031"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262579" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93514" stop="93677"/>
              <exon start="93767" stop="93882"/>
              <exon start="93986" stop="94081"/>
              <exon start="95209" stop="95400"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548087" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93616" stop="93677"/>
              <exon start="93767" stop="93882"/>
              <exon start="93986" stop="94081"/>
              <exon start="95209" stop="95367"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392436" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGCACTCCTCTAGGGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAG : AAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAG : GCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAG : GGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG : AAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCAAGTTGTGGTGACTGTGTATTCTCTGATGAAAG : GCCAAGTATGAAAATGAAACTAGCTAACATCTGGAATAACAAATTACAAGCTCAAAGGGGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG : GTTCTGTGTAGCTGGGGTGTTGGGGCATCTCCAATCCAAACACCTAATTTTACACCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAACCTACTGCATCGAAAAATAATTTATTTTCTCTCATTATTATTATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAACATTTTCTTTCTATGGTTCTCCTTTTATAATCGTTTAATATAAAATTATTTTGTATCATAATTTTTTA</gDNA_template>
            <first_frame> C  T  P  L  G  W  M  G  T  H  I  N  G  L  M  L  E  I  E  V  K  Q  I  S  L  T  R  K  K  K  S  Y  N  S  S  I  L  P  W  Q  E  V  L  C  H  E  *  V  F  K  K  G  R  R  K  *  *  Y  *  D  S  S  *  C  V  T  H  A  R :   N  *  N  C  K  E  T  A  S  F  Y  R  S  Y  L  A  G  A  S  T  T  V  M  S  H  P  I  N  V  I  N  L  Q  P  M  T  V  Y  F  L  M  E   : G  Q  V  *  K  W  N  L  S  T  S  E  I  T  I  T  S  S  R  G  V  L  K  Y  A  Q  W  G  V  K  R  R :   V  D  G  T  R  V  N  G  L  I  R  E  I  K  V  K  Q  M  S  L  *  D  E  E  D  Q  K  K  S  F  S  S  S  I  L  P  K  H  G  E  V  F  C  H  K  *  V  F  K  K  S  S  S  K  *  H  I  L  *  L  F  V  M  C  H  L  C  Q  :  K  L  Q  R  *  G  E  C  S  I  L  Q  K  L  S  A  R  S  F  H  I  Y  V  I  N  L  H  P  S  C  G  D  C  V  F  S  D  E  R :   P  S  M  K  M  K  L  A  N  I  W  N  N  K  L  Q  A  Q  R  G  V  Y  K  Y  T  Q  W  G  F  K  R  R :   F  C  V  A  G  V  L  G  H  L  Q  S  K  H  L  I  L  H  Q  I  W  C  *  P  N  L  L  *  S  T  P  T  Y  C  I  E  K  *  F  I  F  S  H  Y  Y  Y  Y  Y  F  L  F  H  L  Y  F  F  I  S  *  N  I  F  F  L  W  F  S  F  Y  N  R  L  I  *  N  Y  F  V  S  *  F  F  </first_frame>
            <second_frame>  A  L  L  *  G  G  W  G  L  T  *  M  D  *  C  L  K  S  R  *  N  R  *  V  L  Q  G  R  R  S  H  T  T  L  P  F  Y  H  G  K  K  F  F  A  T  S  E  S  S  R  K  A  E  G  N  N  N  I  K  T  V  H  D  V  L  L  M  P   : E  T  R  T  V  R  R  L  H  H  S  T  E  A  I  W  L  E  L  P  R  Q  S  *  V  I  P  S  M  *  L  I  F  N  P  *  Q  C  I  F  *  W  K  :  A  K  C  E  N  G  T  C  Q  H  L  K  *  Q  L  Q  A  Q  G  E  C  S  S  T  H  N  G  E  S  K  E   : G  W  M  E  L  G  *  M  D  *  Y  G  K  S  R  *  N  R  *  A  Y  R  M  K  R  I  R  R  S  H  S  A  H  P  F  Y  Q  S  M  E  K  F  F  A  T  N  E  S  S  R  K  A  A  V  N  N  I  Y  C  D  C  S  *  C  A  T  Y  A  R :   N  Y  S  D  K  E  S  A  A  F  C  R  S  Y  L  L  G  A  S  T  S  M  *  S  I  F  T  Q  V  V  V  T  V  Y  S  L  M  K   : G  Q  V  *  K  *  N  *  L  T  S  G  I  T  N  Y  K  L  K  G  E  C  T  S  T  L  N  G  D  S  K  E   : G  S  V  *  L  G  C  W  G  I  S  N  P  N  T  *  F  Y  T  K  F  G  V  N  Q  I  Y  C  N  Q  L  Q  P  T  A  S  K  N  N  L  F  S  L  I  I  I  I  I  I  F  Y  F  I  Y  I  F  L  F  H  K  T  F  S  F  Y  G  S  P  F  I  I  V  *  Y  K  I  I  L  Y  H  N  F  L </second_frame>
            <third_frame>   H  S  S  R  V  D  G  D  S  H  K  W  I  D  A  *  N  R  G  K  T  D  K  S  Y  K  E  E  E  V  I  Q  L  F  H  F  T  M  A  R  S  S  L  P  R  V  S  L  Q  E  R  Q  K  E  I  I  I  L  R  Q  F  M  M  C  Y  S  C  Q  :  K  L  E  L  *  G  D  C  I  I  L  Q  K  L  S  G  W  S  F  H  D  S  H  E  S  S  H  Q  C  D  *  S  S  T  H  D  S  V  F  S  D  G  R :   P  S  V  K  M  E  P  V  N  I  *  N  N  N  Y  K  L  K  G  S  A  Q  V  R  T  M  G  S  Q  K  K  :  G  G  W  N  S  G  K  W  I  D  T  G  N  Q  G  K  T  D  E  L  I  G  *  R  G  S  E  E  V  I  Q  L  I  H  F  T  K  A  W  R  S  F  L  P  Q  M  S  L  Q  E  K  Q  Q  *  I  T  Y  I  V  T  V  R  D  V  P  L  M  P   : E  T  T  A  I  R  R  V  Q  H  S  A  E  A  I  C  S  E  L  P  H  L  C  N  Q  S  S  P  K  L  W  *  L  C  I  L  *  *  K  :  A  K  Y  E  N  E  T  S  *  H  L  E  *  Q  I  T  S  S  K  G  S  V  Q  V  H  S  M  G  I  Q  K  K  :  V  L  C  S  W  G  V  G  A  S  P  I  Q  T  P  N  F  T  P  N  L  V  L  T  K  F  T  V  I  N  S  N  L  L  H  R  K  I  I  Y  F  L  S  L  L  L  L  L  F  F  I  S  F  I  F  F  Y  F  I  K  H  F  L  S  M  V  L  L  L  *  S  F  N  I  K  L  F  C  I  I  I  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93782" stop="93882"/>
                    <exon start="93986" stop="94081"/>
                    <exon start="95209" stop="95278"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>264</number_coding_nucleotides>
                  <number_encoded_amino_acids>88</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GECSILQKLSARSFHIYVINLHPSCGDCVFSDERPSMKMKLANIWNNKLQAQRGVYKYTQWGFKRRFCVAGVLGHLQSKHLILHQIWC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94025" stop="94081"/>
                    <exon start="95209" stop="95418"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>264</number_coding_nucleotides>
                  <number_encoded_amino_acids>88</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QITSSKGSVQVHSMGIQKKVLCSWGVGASPIQTPNFTPNLVLTKFTVINSNLLHRKIIYFLSLLLLLFFISFIFFYFIKHFLSMVLLL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="3" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90884" stop="91019"/>
                    <exon start="91108" stop="91178"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLQGRRSHTTLPFYHGKKFFATSESSRKAEGNNNIKTVHDVLLMPETRTVRRLHHSTEAIWLELPRQS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="93343" e_stop="93677"/>
            <exon e_start="93767" e_stop="93882"/>
            <exon e_start="93986" e_stop="94081"/>
            <exon e_start="95209" e_stop="95400"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.886" acc_prob="0.900" e_score="1.000"/>
          <exon-intron don_prob="0.863" acc_prob="0.945" e_score="1.000"/>
          <exon-intron don_prob="0.954" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="93343" e_stop="93677" e_length="335"/>
          </exon>
          <intron i_serial="1" don_prob="0.886" acc_prob="0.900">
            <gDNA_intron_boundary i_start="93678" i_stop="93766" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="93767" e_stop="93882" e_length="116"/>
          </exon>
          <intron i_serial="2" don_prob="0.863" acc_prob="0.945">
            <gDNA_intron_boundary i_start="93883" i_stop="93985" i_length="103"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="93986" e_stop="94081" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.954" acc_prob="1.000">
            <gDNA_intron_boundary i_start="94082" i_stop="95208" i_length="1127"/>
          </intron>
          <exon e_serial="4" e_score="0.990">
            <gDNA_exon_boundary e_start="95209" e_stop="95400" e_length="192"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93343" stop="93677"/>
              <exon start="93767" stop="93882"/>
              <exon start="93986" stop="94081"/>
              <exon start="95209" stop="95367"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369254" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93514" stop="93677"/>
              <exon start="93767" stop="93882"/>
              <exon start="93986" stop="94081"/>
              <exon start="95209" stop="95400"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548087" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93616" stop="93677"/>
              <exon start="93767" stop="93882"/>
              <exon start="93986" stop="94081"/>
              <exon start="95209" stop="95367"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392436" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG : AAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCAAGTTGTGGTGACTGTGTATTCTCTGATGAAAG : GCCAAGTATGAAAATGAAACTAGCTAACATCTGGAATAACAAATTACAAGCTCAAAGGGGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG : GTTCTGTGTAGCTGGGGTGTTGGGGCATCTCCAATCCAAACACCTAATTTTACACCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAACCTACTGCATCGAAAAATAATTTATTTTCTCTCATTATTATTATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAACATTTTCTTTCT</gDNA_template>
            <first_frame> M  R  G  L  F  I  V  Q  V  L  L  N  S  I  M  K  E  M  I  C  H  F  Y  I  L  M  V  *  I  T  L  I  I  I  *  H  H  E  L  C  S  P  L  G  W  M  E  L  G  *  M  D  *  Y  G  K  S  R  *  N  R  *  A  Y  R  M  K  R  I  R  R  S  H  S  A  H  P  F  Y  Q  S  M  E  K  F  F  A  T  N  E  S  S  R  K  A  A  V  N  N  I  Y  C  D  C  S  *  C  A  T  Y  A  R :   N  Y  S  D  K  E  S  A  A  F  C  R  S  Y  L  L  G  A  S  T  S  M  *  S  I  F  T  Q  V  V  V  T  V  Y  S  L  M  K   : G  Q  V  *  K  *  N  *  L  T  S  G  I  T  N  Y  K  L  K  G  E  C  T  S  T  L  N  G  D  S  K  E   : G  S  V  *  L  G  C  W  G  I  S  N  P  N  T  *  F  Y  T  K  F  G  V  N  Q  I  Y  C  N  Q  L  Q  P  T  A  S  K  N  N  L  F  S  L  I  I  I  I  I  I  F  Y  F  I  Y  I  F  L  F  H  K  T  F  S  F  </first_frame>
            <second_frame>  C  V  G  C  L  *  F  R  S  F  *  I  L  L  *  R  R  *  F  V  T  F  T  F  S  W  C  R  *  P  *  *  L  F  D  T  T  S  Y  A  L  L  *  G  G  W  N  S  G  K  W  I  D  T  G  N  Q  G  K  T  D  E  L  I  G  *  R  G  S  E  E  V  I  Q  L  I  H  F  T  K  A  W  R  S  F  L  P  Q  M  S  L  Q  E  K  Q  Q  *  I  T  Y  I  V  T  V  R  D  V  P  L  M  P   : E  T  T  A  I  R  R  V  Q  H  S  A  E  A  I  C  S  E  L  P  H  L  C  N  Q  S  S  P  K  L  W  *  L  C  I  L  *  *  K  :  A  K  Y  E  N  E  T  S  *  H  L  E  *  Q  I  T  S  S  K  G  S  V  Q  V  H  S  M  G  I  Q  K  K  :  V  L  C  S  W  G  V  G  A  S  P  I  Q  T  P  N  F  T  P  N  L  V  L  T  K  F  T  V  I  N  S  N  L  L  H  R  K  I  I  Y  F  L  S  L  L  L  L  L  F  F  I  S  F  I  F  F  Y  F  I  K  H  F  L  S </second_frame>
            <third_frame>   A  W  V  V  Y  S  S  G  P  S  E  F  Y  Y  E  G  D  D  L  S  L  L  H  S  H  G  V  D  N  L  N  N  Y  L  T  P  R  A  M  L  S  S  R  V  D  G  T  R  V  N  G  L  I  R  E  I  K  V  K  Q  M  S  L  *  D  E  E  D  Q  K  K  S  F  S  S  S  I  L  P  K  H  G  E  V  F  C  H  K  *  V  F  K  K  S  S  S  K  *  H  I  L  *  L  F  V  M  C  H  L  C  Q  :  K  L  Q  R  *  G  E  C  S  I  L  Q  K  L  S  A  R  S  F  H  I  Y  V  I  N  L  H  P  S  C  G  D  C  V  F  S  D  E  R :   P  S  M  K  M  K  L  A  N  I  W  N  N  K  L  Q  A  Q  R  G  V  Y  K  Y  T  Q  W  G  F  K  R  R :   F  C  V  A  G  V  L  G  H  L  Q  S  K  H  L  I  L  H  Q  I  W  C  *  P  N  L  L  *  S  T  P  T  Y  C  I  E  K  *  F  I  F  S  H  Y  Y  Y  Y  Y  F  L  F  H  L  Y  F  F  I  S  *  N  I  F  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93782" stop="93882"/>
                    <exon start="93986" stop="94081"/>
                    <exon start="95209" stop="95278"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>264</number_coding_nucleotides>
                  <number_encoded_amino_acids>88</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GECSILQKLSARSFHIYVINLHPSCGDCVFSDERPSMKMKLANIWNNKLQAQRGVYKYTQWGFKRRFCVAGVLGHLQSKHLILHQIWC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94025" stop="94081"/>
                    <exon start="95209" stop="95400"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QITSSKGSVQVHSMGIQKKVLCSWGVGASPIQTPNFTPNLVLTKFTVINSNLLHRKIIYFLSLLLLLFFISFIFFYFIKHFLS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="103437" PGL_stop="104629"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="103437" e_stop="103657"/>
            <exon e_start="103762" e_stop="103863"/>
            <exon e_start="103963" e_stop="104057"/>
            <exon e_start="104582" e_stop="104629"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.979" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.815" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="103437" e_stop="103657" e_length="221"/>
          </exon>
          <intron i_serial="1" don_prob="0.979" acc_prob="0.000">
            <gDNA_intron_boundary i_start="103658" i_stop="103761" i_length="104"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="103762" e_stop="103863" e_length="102"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.985">
            <gDNA_intron_boundary i_start="103864" i_stop="103962" i_length="99"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="103963" e_stop="104057" e_length="95"/>
          </exon>
          <intron i_serial="3" don_prob="0.815" acc_prob="0.993">
            <gDNA_intron_boundary i_start="104058" i_stop="104581" i_length="524"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="104582" e_stop="104629" e_length="48"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103437" stop="103657"/>
              <exon start="103762" stop="103863"/>
              <exon start="103963" stop="104025"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394403" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103438" stop="103657"/>
              <exon start="103762" stop="103863"/>
              <exon start="103963" stop="104057"/>
              <exon start="104582" stop="104629"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331157" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103525" stop="103657"/>
              <exon start="103762" stop="103780"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331158" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCGGAGCCGGAGTTCCAATTAGCAATAAGAGAAAAAGAAAAAAAGAAGTGAAATAAGCCTTAAAAGGCCAACCCCGAGCTTATAAGGAAGAAGATCAGAATAAGTCATTCAGGTCATTCATTTTACAAAAGCATGAAGTTCTTTGCCACGAATGAGTCTTCAAGAATGGTAGCAGTAACTAACAAATATTATGACTGTTCATGATGTGCCGCTCATGCCAG : GAGACTGCAGCAGTCTGCAGAGGCTATCTGCTCGGAGCTTCCACATCAATATAATCAATCTTCCACCCAAAGTCGTGGTGATGGTGTATTCTATGATGAAAG : GCCAAGTGTGAAAATGAAACTAGTTAACATCTGGAACAACAAATTACAAGCTCAAGGAGAGTGTACAAGTACACACGATGGGGAGTCAATAGAAG : GTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTCTTTCA</gDNA_template>
            <first_frame> P  E  P  E  F  Q  L  A  I  R  E  K  E  K  K  K  *  N  K  P  *  K  A  N  P  E  L  I  R  K  K  I  R  I  S  H  S  G  H  S  F  Y  K  S  M  K  F  F  A  T  N  E  S  S  R  M  V  A  V  T  N  K  Y  Y  D  C  S  *  C  A  A  H  A  R :   R  L  Q  Q  S  A  E  A  I  C  S  E  L  P  H  Q  Y  N  Q  S  S  T  Q  S  R  G  D  G  V  F  Y  D  E  R :   P  S  V  K  M  K  L  V  N  I  W  N  N  K  L  Q  A  Q  G  E  C  T  S  T  H  D  G  E  S  I  E   : G  A  I  M  L  G  D  A  L  L  P  S  A  C  S  F  </first_frame>
            <second_frame>  R  S  R  S  S  N  *  Q  *  E  K  K  K  K  R  S  E  I  S  L  K  R  P  T  P  S  L  *  G  R  R  S  E  *  V  I  Q  V  I  H  F  T  K  A  *  S  S  L  P  R  M  S  L  Q  E  W  *  Q  *  L  T  N  I  M  T  V  H  D  V  P  L  M  P   : G  D  C  S  S  L  Q  R  L  S  A  R  S  F  H  I  N  I  I  N  L  P  P  K  V  V  V  M  V  Y  S  M  M  K   : G  Q  V  *  K  *  N  *  L  T  S  G  T  T  N  Y  K  L  K  E  S  V  Q  V  H  T  M  G  S  Q  *  K  :  V  Q  L  C  L  E  M  R  C  Y  L  Q  H  V  L  S </second_frame>
            <third_frame>   G  A  G  V  P  I  S  N  K  R  K  R  K  K  E  V  K  *  A  L  K  G  Q  P  R  A  Y  K  E  E  D  Q  N  K  S  F  R  S  F  I  L  Q  K  H  E  V  L  C  H  E  *  V  F  K  N  G  S  S  N  *  Q  I  L  *  L  F  M  M  C  R  S  C  Q  :  E  T  A  A  V  C  R  G  Y  L  L  G  A  S  T  S  I  *  S  I  F  H  P  K  S  W  *  W  C  I  L  *  *  K  :  A  K  C  E  N  E  T  S  *  H  L  E  Q  Q  I  T  S  S  R  R  V  Y  K  Y  T  R  W  G  V  N  R  R :   C  N  Y  A  W  R  C  V  V  T  F  S  M  F  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="103641" stop="103657"/>
                    <exon start="103762" stop="103863"/>
                    <exon start="103963" stop="104057"/>
                    <exon start="104582" stop="104628"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>261</number_coding_nucleotides>
                  <number_encoded_amino_acids>87</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CAAHARRLQQSAEAICSELPHQYNQSSTQSRGDGVFYDERPSVKMKLVNIWNNKLQAQGECTSTHDGESIEGAIMLGDALLPSACSF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="116673" PGL_stop="131157"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="120881" e_stop="121278"/>
            <exon e_start="121368" e_stop="121484"/>
            <exon e_start="121588" e_stop="121683"/>
            <exon e_start="122851" e_stop="123115"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.929" acc_prob="0.953" e_score="1.000"/>
          <exon-intron don_prob="0.292" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.712" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="120881" e_stop="121278" e_length="398"/>
          </exon>
          <intron i_serial="1" don_prob="0.929" acc_prob="0.953">
            <gDNA_intron_boundary i_start="121279" i_stop="121367" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="121368" e_stop="121484" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="0.292" acc_prob="0.972">
            <gDNA_intron_boundary i_start="121485" i_stop="121587" i_length="103"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="121588" e_stop="121683" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.712" acc_prob="1.000">
            <gDNA_intron_boundary i_start="121684" i_stop="122850" i_length="1167"/>
          </intron>
          <exon e_serial="4" e_score="0.974">
            <gDNA_exon_boundary e_start="122851" e_stop="123115" e_length="265"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120881" stop="121278"/>
              <exon start="121368" stop="121484"/>
              <exon start="121588" stop="121683"/>
              <exon start="122851" stop="122955"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392140" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120881" stop="121278"/>
              <exon start="121368" stop="121484"/>
              <exon start="121588" stop="121640"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246635" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120925" stop="121278"/>
              <exon start="121368" stop="121484"/>
              <exon start="121588" stop="121683"/>
              <exon start="122851" stop="123016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392139" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121374" stop="121484"/>
              <exon start="121588" stop="121683"/>
              <exon start="122851" stop="123115"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394402" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG : AAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAG : GCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG : GTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAACAAATTCTTTCTATGGTTCTCCTTTTATAATCGTTTAATATAAAATTATTTTGTATCATAATTTTTTAAATATATAAATTGCT</gDNA_template>
            <first_frame> Q  N  L  I  L  I  C  M  L  V  L  K  R  I  W  G  S  I  G  A  L  D  A  W  V  V  Y  S  S  G  P  S  E  F  Y  Y  E  G  D  D  L  S  L  L  H  S  H  G  V  D  N  L  N  N  Y  L  T  P  R  A  M  L  S  S  R  V  D  G  T  R  V  N  G  L  I  R  E  I  K  V  K  Q  M  S  L  *  D  E  E  D  Q  K  K  S  F  S  S  S  I  L  P  K  H  G  E  V  F  A  T  N  E  S  S  R  K  A  A  V  N  N  K  Y  C  D  C  S  *  C  A  T  Y  A  R :   N  Y  S  D  K  E  T  A  A  F  C  R  S  Y  L  L  G  A  S  T  S  M  *  S  I  F  T  P  S  C  G  D  C  V  L  S  D  E  R :   P  S  M  K  M  K  L  V  N  I  W  N  N  K  L  Q  A  Q  R  R  V  Y  K  Y  T  Q  W  G  F  K  R  R :   F  C  V  A  G  V  L  G  H  L  Q  S  K  H  L  I  L  H  Q  I  W  C  *  P  N  L  L  *  S  T  P  I  Y  C  I  E  K  *  F  I  F  S  L  Y  Y  Y  I  I  I  F  Y  F  I  Y  I  F  L  F  H  K  T  N  S  F  Y  G  S  P  F  I  I  V  *  Y  K  I  I  L  Y  H  N  F  L  N  I  *  I  A </first_frame>
            <second_frame>  K  I  *  S  *  F  V  C  L  F  *  R  G  Y  G  A  V  *  G  L  L  M  R  G  L  F  I  V  Q  V  L  L  N  S  I  M  K  E  M  I  C  H  F  Y  I  L  M  V  *  I  T  L  I  I  I  *  H  H  E  L  C  S  P  L  G  W  M  E  L  G  *  M  D  *  Y  G  K  S  R  *  N  R  *  A  Y  R  M  K  R  I  R  R  S  H  S  A  H  P  F  Y  Q  S  M  E  K  F  L  P  Q  M  S  L  Q  E  K  Q  Q  *  I  T  N  I  V  T  V  R  D  V  P  L  M  P   : E  T  T  A  T  R  R  L  Q  H  S  A  E  A  I  C  S  E  L  P  H  L  C  N  Q  S  S  P  Q  V  V  V  T  V  Y  C  L  M  K   : G  Q  V  *  K  *  N  *  L  T  S  G  I  T  N  Y  K  L  K  G  E  C  T  S  T  L  N  G  D  S  K  E   : G  S  V  *  L  G  C  *  G  I  S  N  P  N  T  *  F  Y  I  K  F  G  V  N  Q  I  Y  C  N  Q  L  Q  S  T  A  S  K  N  N  L  F  S  L  F  I  I  I  L  L  F  F  I  S  F  I  F  F  Y  F  I  K  Q  I  L  S  M  V  L  L  L  *  S  F  N  I  K  L  F  C  I  I  I  F  *  I  Y  K  L   </second_frame>
            <third_frame>   K  F  D  L  D  L  Y  A  C  S  K  E  D  M  G  Q  Y  R  G  S  *  C  V  G  C  L  *  F  R  S  F  *  I  L  L  *  R  R  *  F  V  T  F  T  F  S  W  C  R  *  P  *  *  L  F  D  T  T  S  Y  A  L  L  *  G  G  W  N  S  G  K  W  I  D  T  G  N  Q  G  K  T  D  E  L  I  G  *  R  G  S  E  E  V  I  Q  L  I  H  F  T  K  A  W  R  S  F  C  H  K  *  V  F  K  K  S  S  S  K  *  Q  I  L  *  L  F  V  M  C  H  L  C  Q  :  K  L  Q  R  Q  G  D  C  S  I  L  Q  K  L  S  A  R  S  F  H  I  Y  V  I  N  L  H  P  K  L  W  *  L  C  I  V  *  *  K  :  A  K  Y  E  N  E  T  S  *  H  L  E  *  Q  I  T  S  S  K  E  S  V  Q  V  H  S  M  G  I  Q  K  K  :  V  L  C  S  W  G  V  R  A  S  P  I  Q  T  P  N  F  T  S  N  L  V  L  T  K  F  T  V  I  N  S  N  L  L  H  R  K  I  I  Y  F  L  S  L  L  L  Y  Y  Y  F  L  F  H  L  Y  F  F  I  S  *  N  K  F  F  L  W  F  S  F  Y  N  R  L  I  *  N  Y  F  V  S  *  F  F  K  Y  I  N  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="120881" stop="121138"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QNLILICMLVLKRIWGSIGALDAWVVYSSGPSEFYYEGDDLSLLHSHGVDNLNNYLTPRAMLSSRVDGTRVNGLIREIKVKQMSL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="121627" stop="121683"/>
                    <exon start="122851" stop="123030"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QITSSKESVQVHSMGIQKKVLCSWGVRASPIQTPNFTSNLVLTKFTVINSNLLHRKIIYFLSLLLYYYFLFHLYFFIS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="121438" stop="121484"/>
                    <exon start="121588" stop="121683"/>
                    <exon start="122851" stop="122920"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SIFTPSCGDCVLSDERPSMKMKLVNIWNNKLQAQRRVYKYTQWGFKRRFCVAGVLGHLQSKHLILHQIWC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="120881" e_stop="121278"/>
            <exon e_start="121368" e_stop="121484"/>
            <exon e_start="121588" e_stop="121683"/>
            <exon e_start="130875" e_stop="131157"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.929" acc_prob="0.953" e_score="1.000"/>
          <exon-intron don_prob="0.292" acc_prob="0.972" e_score="0.991"/>
          <exon-intron don_prob="0.712" acc_prob="0.445" e_score="0.948"/>
          <exon-only e_score="0.809"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="120881" e_stop="121278" e_length="398"/>
          </exon>
          <intron i_serial="1" don_prob="0.929" acc_prob="0.953">
            <gDNA_intron_boundary i_start="121279" i_stop="121367" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="0.991">
            <gDNA_exon_boundary e_start="121368" e_stop="121484" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="0.292" acc_prob="0.972">
            <gDNA_intron_boundary i_start="121485" i_stop="121587" i_length="103"/>
          </intron>
          <exon e_serial="3" e_score="0.948">
            <gDNA_exon_boundary e_start="121588" e_stop="121683" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.712" acc_prob="0.445">
            <gDNA_intron_boundary i_start="121684" i_stop="130874" i_length="9191"/>
          </intron>
          <exon e_serial="4" e_score="0.809">
            <gDNA_exon_boundary e_start="130875" e_stop="131157" e_length="283"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120881" stop="121278"/>
              <exon start="121368" stop="121484"/>
              <exon start="121588" stop="121640"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246635" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121064" stop="121278"/>
              <exon start="121368" stop="121484"/>
              <exon start="121588" stop="121683"/>
              <exon start="130875" stop="131157"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E692867" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121064" stop="121278"/>
              <exon start="121368" stop="121484"/>
              <exon start="121588" stop="121683"/>
              <exon start="130875" stop="131100"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E696707" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG : AAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAG : GCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG : AATTCGCACCAACAAAAACTCAAAAAGTTTCTTATTTCTCGGACAAAATTTCAGAAGTTGCACCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACGGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGGTGCAATTATGCTTGG</gDNA_template>
            <first_frame> Q  N  L  I  L  I  C  M  L  V  L  K  R  I  W  G  S  I  G  A  L  D  A  W  V  V  Y  S  S  G  P  S  E  F  Y  Y  E  G  D  D  L  S  L  L  H  S  H  G  V  D  N  L  N  N  Y  L  T  P  R  A  M  L  S  S  R  V  D  G  T  R  V  N  G  L  I  R  E  I  K  V  K  Q  M  S  L  *  D  E  E  D  Q  K  K  S  F  S  S  S  I  L  P  K  H  G  E  V  F  A  T  N  E  S  S  R  K  A  A  V  N  N  K  Y  C  D  C  S  *  C  A  T  Y  A  R :   N  Y  S  D  K  E  T  A  A  F  C  R  S  Y  L  L  G  A  S  T  S  M  *  S  I  F  T  P  S  C  G  D  C  V  L  S  D  E  R :   P  S  M  K  M  K  L  V  N  I  W  N  N  K  L  Q  A  Q  R  R  V  Y  K  Y  T  Q  W  G  F  K  R  R :   I  R  T  N  K  N  S  K  S  F  L  F  L  G  Q  N  F  R  S  C  T  K  N  D  F  E  I  F  F  L  I  P  L  S  L  F  S  F  V  L  E  Q  *  P  *  Y  G  *  S  G  K  D  S  K  E  *  G  *  I  *  H  G  Y  *  F  W  G  A  A  *  L  M  D  *  L  V  M  L  P  F  Y  L  F  I  V  Y  F  R  R  C  N  Y  A  W </first_frame>
            <second_frame>  K  I  *  S  *  F  V  C  L  F  *  R  G  Y  G  A  V  *  G  L  L  M  R  G  L  F  I  V  Q  V  L  L  N  S  I  M  K  E  M  I  C  H  F  Y  I  L  M  V  *  I  T  L  I  I  I  *  H  H  E  L  C  S  P  L  G  W  M  E  L  G  *  M  D  *  Y  G  K  S  R  *  N  R  *  A  Y  R  M  K  R  I  R  R  S  H  S  A  H  P  F  Y  Q  S  M  E  K  F  L  P  Q  M  S  L  Q  E  K  Q  Q  *  I  T  N  I  V  T  V  R  D  V  P  L  M  P   : E  T  T  A  T  R  R  L  Q  H  S  A  E  A  I  C  S  E  L  P  H  L  C  N  Q  S  S  P  Q  V  V  V  T  V  Y  C  L  M  K   : G  Q  V  *  K  *  N  *  L  T  S  G  I  T  N  Y  K  L  K  G  E  C  T  S  T  L  N  G  D  S  K  E   : E  F  A  P  T  K  T  Q  K  V  S  Y  F  S  D  K  I  S  E  V  A  P  K  M  I  L  R  Y  F  S  *  F  L  C  L  C  F  H  L  C  W  N  N  D  P  D  M  D  R  V  E  K  I  Q  R  N  E  D  K  Y  N  T  A  T  N  F  G  E  Q  H  N  *  W  I  D  W  *  C  Y  H  S  I  Y  L  L  F  I  F  V  G  A  I  M  L   </second_frame>
            <third_frame>   K  F  D  L  D  L  Y  A  C  S  K  E  D  M  G  Q  Y  R  G  S  *  C  V  G  C  L  *  F  R  S  F  *  I  L  L  *  R  R  *  F  V  T  F  T  F  S  W  C  R  *  P  *  *  L  F  D  T  T  S  Y  A  L  L  *  G  G  W  N  S  G  K  W  I  D  T  G  N  Q  G  K  T  D  E  L  I  G  *  R  G  S  E  E  V  I  Q  L  I  H  F  T  K  A  W  R  S  F  C  H  K  *  V  F  K  K  S  S  S  K  *  Q  I  L  *  L  F  V  M  C  H  L  C  Q  :  K  L  Q  R  Q  G  D  C  S  I  L  Q  K  L  S  A  R  S  F  H  I  Y  V  I  N  L  H  P  K  L  W  *  L  C  I  V  *  *  K  :  A  K  Y  E  N  E  T  S  *  H  L  E  *  Q  I  T  S  S  K  E  S  V  Q  V  H  S  M  G  I  Q  K  K  :  N  S  H  Q  Q  K  L  K  K  F  L  I  S  R  T  K  F  Q  K  L  H  Q  K  *  F  *  D  I  F  L  N  S  F  V  F  V  F  I  C  V  G  T  M  T  L  I  W  I  E  W  K  R  F  K  G  M  R  I  N  I  T  R  L  L  I  L  G  S  S  I  I  D  G  L  I  G  D  V  T  I  L  F  I  Y  C  L  F  S  *  V  Q  L  C  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="121438" stop="121484"/>
                    <exon start="121588" stop="121683"/>
                    <exon start="130875" stop="131004"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SIFTPSCGDCVLSDERPSMKMKLVNIWNNKLQAQRRVYKYTQWGFKRRIRTNKNSKSFLFLGQNFRSCTKNDFEIFFLIPLSLFSFVLEQ*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="120881" stop="121138"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QNLILICMLVLKRIWGSIGALDAWVVYSSGPSEFYYEGDDLSLLHSHGVDNLNNYLTPRAMLSSRVDGTRVNGLIREIKVKQMSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="116673" e_stop="116871"/>
            <exon e_start="121075" e_stop="121278"/>
            <exon e_start="121368" e_stop="121484"/>
            <exon e_start="121588" e_stop="121683"/>
            <exon e_start="122851" e_stop="123115"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.971" acc_prob="0.431" e_score="1.000"/>
          <exon-intron don_prob="0.929" acc_prob="0.953" e_score="0.990"/>
          <exon-intron don_prob="0.292" acc_prob="0.972" e_score="0.983"/>
          <exon-intron don_prob="0.712" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="116673" e_stop="116871" e_length="199"/>
          </exon>
          <intron i_serial="1" don_prob="0.971" acc_prob="0.431">
            <gDNA_intron_boundary i_start="116872" i_stop="121074" i_length="4203"/>
          </intron>
          <exon e_serial="2" e_score="0.990">
            <gDNA_exon_boundary e_start="121075" e_stop="121278" e_length="204"/>
          </exon>
          <intron i_serial="2" don_prob="0.929" acc_prob="0.953">
            <gDNA_intron_boundary i_start="121279" i_stop="121367" i_length="89"/>
          </intron>
          <exon e_serial="3" e_score="0.983">
            <gDNA_exon_boundary e_start="121368" e_stop="121484" e_length="117"/>
          </exon>
          <intron i_serial="3" don_prob="0.292" acc_prob="0.972">
            <gDNA_intron_boundary i_start="121485" i_stop="121587" i_length="103"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="121588" e_stop="121683" e_length="96"/>
          </exon>
          <intron i_serial="4" don_prob="0.712" acc_prob="1.000">
            <gDNA_intron_boundary i_start="121684" i_stop="122850" i_length="1167"/>
          </intron>
          <exon e_serial="5" e_score="0.974">
            <gDNA_exon_boundary e_start="122851" e_stop="123115" e_length="265"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116673" stop="116871"/>
              <exon start="121075" stop="121278"/>
              <exon start="121368" stop="121484"/>
              <exon start="121588" stop="121683"/>
              <exon start="122851" stop="122951"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316516" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121374" stop="121484"/>
              <exon start="121588" stop="121683"/>
              <exon start="122851" stop="123115"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394402" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAACCGGAAGCTACCGGAGTATAGAACTCGCCACCGTCGCAGAAGCGGAACCTACCGGAGTATAAAACTCGCCACCGTCGCAGGACCGGAACATCATACGCAACCGGATGAAAACCCCTAAAACCGAATCGATTTTCCCGCCGTCAGCTTCCCATCATGTTAGAATTCTTGAAAAATCTGGTAACTCGATGGTACAGA : GGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG : AAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAG : GCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG : GTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAACAAATTCTTTCTATGGTTCTCCTTTTATAATCGTTTAATATAAAATTATTTTGTATCATAATTTTTTAAATATATAAATTGCT</gDNA_template>
            <first_frame> R  T  G  S  Y  R  S  I  E  L  A  T  V  A  E  A  E  P  T  G  V  *  N  S  P  P  S  Q  D  R  N  I  I  R  N  R  M  K  T  P  K  T  E  S  I  F  P  P  S  A  S  H  H  V  R  I  L  E  K  S  G  N  S  M  V  Q   : R  W  M  E  L  G  *  M  D  *  Y  G  K  S  R  *  N  R  *  A  Y  R  M  K  R  I  R  R  S  H  S  A  H  P  F  Y  Q  S  M  E  K  F  L  P  Q  M  S  L  Q  E  K  Q  Q  *  I  T  N  I  V  T  V  R  D  V  P  L  M  P   : E  T  T  A  T  R  R  L  Q  H  S  A  E  A  I  C  S  E  L  P  H  L  C  N  Q  S  S  P  Q  V  V  V  T  V  Y  C  L  M  K   : G  Q  V  *  K  *  N  *  L  T  S  G  I  T  N  Y  K  L  K  G  E  C  T  S  T  L  N  G  D  S  K  E   : G  S  V  *  L  G  C  *  G  I  S  N  P  N  T  *  F  Y  I  K  F  G  V  N  Q  I  Y  C  N  Q  L  Q  S  T  A  S  K  N  N  L  F  S  L  F  I  I  I  L  L  F  F  I  S  F  I  F  F  Y  F  I  K  Q  I  L  S  M  V  L  L  L  *  S  F  N  I  K  L  F  C  I  I  I  F  *  I  Y  K  L   </first_frame>
            <second_frame>  E  P  E  A  T  G  V  *  N  S  P  P  S  Q  K  R  N  L  P  E  Y  K  T  R  H  R  R  R  T  G  T  S  Y  A  T  G  *  K  P  L  K  P  N  R  F  S  R  R  Q  L  P  I  M  L  E  F  L  K  N  L  V  T  R  W  Y  R  :  G  G  W  N  S  G  K  W  I  D  T  G  N  Q  G  K  T  D  E  L  I  G  *  R  G  S  E  E  V  I  Q  L  I  H  F  T  K  A  W  R  S  F  C  H  K  *  V  F  K  K  S  S  S  K  *  Q  I  L  *  L  F  V  M  C  H  L  C  Q  :  K  L  Q  R  Q  G  D  C  S  I  L  Q  K  L  S  A  R  S  F  H  I  Y  V  I  N  L  H  P  K  L  W  *  L  C  I  V  *  *  K  :  A  K  Y  E  N  E  T  S  *  H  L  E  *  Q  I  T  S  S  K  E  S  V  Q  V  H  S  M  G  I  Q  K  K  :  V  L  C  S  W  G  V  R  A  S  P  I  Q  T  P  N  F  T  S  N  L  V  L  T  K  F  T  V  I  N  S  N  L  L  H  R  K  I  I  Y  F  L  S  L  L  L  Y  Y  Y  F  L  F  H  L  Y  F  F  I  S  *  N  K  F  F  L  W  F  S  F  Y  N  R  L  I  *  N  Y  F  V  S  *  F  F  K  Y  I  N  C  </second_frame>
            <third_frame>   N  R  K  L  P  E  Y  R  T  R  H  R  R  R  S  G  T  Y  R  S  I  K  L  A  T  V  A  G  P  E  H  H  T  Q  P  D  E  N  P  *  N  R  I  D  F  P  A  V  S  F  P  S  C  *  N  S  *  K  I  W  *  L  D  G  T  E :   V  D  G  T  R  V  N  G  L  I  R  E  I  K  V  K  Q  M  S  L  *  D  E  E  D  Q  K  K  S  F  S  S  S  I  L  P  K  H  G  E  V  F  A  T  N  E  S  S  R  K  A  A  V  N  N  K  Y  C  D  C  S  *  C  A  T  Y  A  R :   N  Y  S  D  K  E  T  A  A  F  C  R  S  Y  L  L  G  A  S  T  S  M  *  S  I  F  T  P  S  C  G  D  C  V  L  S  D  E  R :   P  S  M  K  M  K  L  V  N  I  W  N  N  K  L  Q  A  Q  R  R  V  Y  K  Y  T  Q  W  G  F  K  R  R :   F  C  V  A  G  V  L  G  H  L  Q  S  K  H  L  I  L  H  Q  I  W  C  *  P  N  L  L  *  S  T  P  I  Y  C  I  E  K  *  F  I  F  S  L  Y  Y  Y  I  I  I  F  Y  F  I  Y  I  F  L  F  H  K  T  N  S  F  Y  G  S  P  F  I  I  V  *  Y  K  I  I  L  Y  H  N  F  L  N  I  *  I  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="121627" stop="121683"/>
                    <exon start="122851" stop="123030"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QITSSKESVQVHSMGIQKKVLCSWGVRASPIQTPNFTSNLVLTKFTVINSNLLHRKIIYFLSLLLYYYFLFHLYFFIS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="121438" stop="121484"/>
                    <exon start="121588" stop="121683"/>
                    <exon start="122851" stop="122920"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SIFTPSCGDCVLSDERPSMKMKLVNIWNNKLQAQRRVYKYTQWGFKRRFCVAGVLGHLQSKHLILHQIWC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="129424" e_stop="130004"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="129424" e_stop="130004" e_length="581"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129424" stop="130004"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302982" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GATAACGAATTCAGTGTTTCAGCTAGCTCCAGTTACAAATCAGACTGCCTATTAGTTCTATGACTTCCTTTTCTCTTGAGCTACTTTTGGAAAGCCTAGATAAGAATATAGTTGTTGAAGTATCCTCCTCATCTGTTGCTATCCCATTCCCTGCTCCACTTTTCAGATATACCTGTGAATTATGAGATCAGGAAAAAGAGGTGCAGGACCCAGAGTTGCAAAGTGACACTTGAACTTCGTTCCTGCAGCCAAAGAAATTGACCGGAGAGTGCACTGTCAGGAGTTAGATTCGATCTTCACGGATTATTCTGTGGGGAAGTACTTCTGAAAAGCAAGATCCTGAGTCCAGATTCCTCTGTCAGATCAAAAGTACTTCACGGATTGTTTCCACATGCTGCAAAAAGAGATCTCGATTTTATGCTTGTTCTAAAGAGGATATGAGTATTATAGGGGAAGTTGATGCTTGGGATGTTTATAGTTCAGGTCCTTCTGCATTCTATTATGATGGAGATGATTTGTCACATATACATTCTCATGGTGAAGAAAACCTTAAAAATTATTTGACACTCGAGCTATGCTCT</gDNA_template>
            <first_frame> D  N  E  F  S  V  S  A  S  S  S  Y  K  S  D  C  L  L  V  L  *  L  P  F  L  L  S  Y  F  W  K  A  *  I  R  I  *  L  L  K  Y  P  P  H  L  L  L  S  H  S  L  L  H  F  S  D  I  P  V  N  Y  E  I  R  K  K  R  C  R  T  Q  S  C  K  V  T  L  E  L  R  S  C  S  Q  R  N  *  P  E  S  A  L  S  G  V  R  F  D  L  H  G  L  F  C  G  E  V  L  L  K  S  K  I  L  S  P  D  S  S  V  R  S  K  V  L  H  G  L  F  P  H  A  A  K  R  D  L  D  F  M  L  V  L  K  R  I  *  V  L  *  G  K  L  M  L  G  M  F  I  V  Q  V  L  L  H  S  I  M  M  E  M  I  C  H  I  Y  I  L  M  V  K  K  T  L  K  I  I  *  H  S  S  Y  A   </first_frame>
            <second_frame>  I  T  N  S  V  F  Q  L  A  P  V  T  N  Q  T  A  Y  *  F  Y  D  F  L  F  S  *  A  T  F  G  K  P  R  *  E  Y  S  C  *  S  I  L  L  I  C  C  Y  P  I  P  C  S  T  F  Q  I  Y  L  *  I  M  R  S  G  K  R  G  A  G  P  R  V  A  K  *  H  L  N  F  V  P  A  A  K  E  I  D  R  R  V  H  C  Q  E  L  D  S  I  F  T  D  Y  S  V  G  K  Y  F  *  K  A  R  S  *  V  Q  I  P  L  S  D  Q  K  Y  F  T  D  C  F  H  M  L  Q  K  E  I  S  I  L  C  L  F  *  R  G  Y  E  Y  Y  R  G  S  *  C  L  G  C  L  *  F  R  S  F  C  I  L  L  *  W  R  *  F  V  T  Y  T  F  S  W  *  R  K  P  *  K  L  F  D  T  R  A  M  L  </second_frame>
            <third_frame>   *  R  I  Q  C  F  S  *  L  Q  L  Q  I  R  L  P  I  S  S  M  T  S  F  S  L  E  L  L  L  E  S  L  D  K  N  I  V  V  E  V  S  S  S  S  V  A  I  P  F  P  A  P  L  F  R  Y  T  C  E  L  *  D  Q  E  K  E  V  Q  D  P  E  L  Q  S  D  T  *  T  S  F  L  Q  P  K  K  L  T  G  E  C  T  V  R  S  *  I  R  S  S  R  I  I  L  W  G  S  T  S  E  K  Q  D  P  E  S  R  F  L  C  Q  I  K  S  T  S  R  I  V  S  T  C  C  K  K  R  S  R  F  Y  A  C  S  K  E  D  M  S  I  I  G  E  V  D  A  W  D  V  Y  S  S  G  P  S  A  F  Y  Y  D  G  D  D  L  S  H  I  H  S  H  G  E  E  N  L  K  N  Y  L  T  L  E  L  C  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="129711" stop="130004"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>294</number_coding_nucleotides>
                  <number_encoded_amino_acids>98</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IRSSRIILWGSTSEKQDPESRFLCQIKSTSRIVSTCCKKRSRFYACSKEDMSIIGEVDAWDVYSSGPSAFYYDGDDLSHIHSHGEENLKNYLTLELCS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="119595" e_stop="119987"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="119595" e_stop="119987" e_length="393"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="119595" stop="119987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245170" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="5" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACTTTTTAGGATTACTGGATCTTGTTTCACTGATTACTTTGTCTGATAATGCAGACATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATGTATTTGTTAGAAATGCTGCTCATCCCAGCTCAGAATTTCTACTTTGTGTGTCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAAGGAAAATAAAAAGAAGTTTGAATGTTGATATATACCGTCCTTAAGCTGACTTTTCTAAACGATGCTTCACAATCAAGCTAGAAAATGACTAAGCAAGTGCTGTCCTAATGAAATGGTGGACTGAAGAGTGCACTGGTAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATG</gDNA_template>
            <first_frame> T  F  *  D  Y  W  I  L  F  H  *  L  L  C  L  I  M  Q  T  F  C  Y  E  L  D  *  E  A  I  N  G  M  L  C  I  C  *  K  C  C  S  S  Q  L  R  I  S  T  L  C  V  I  C  R  L  R  E  E  *  F  E  L  L  S  Q  K  G  K  *  K  E  V  *  M  L  I  Y  T  V  L  K  L  T  F  L  N  D  A  S  Q  S  S  *  K  M  T  K  Q  V  L  S  *  *  N  G  G  L  K  S  A  L  V  G  V  R  F  D  L  H  R  L  F  G  G  D  V  L  L  K  S  M </first_frame>
            <second_frame>  L  F  R  I  T  G  S  C  F  T  D  Y  F  V  *  *  C  R  H  F  A  M  N  W  I  R  K  L  S  M  A  C  Y  V  F  V  R  N  A  A  H  P  S  S  E  F  L  L  C  V  S  Y  V  G  *  E  R  S  S  L  N  Y  Y  L  K  K  E  N  K  K  K  F  E  C  *  Y  I  P  S  L  S  *  L  F  *  T  M  L  H  N  Q  A  R  K  *  L  S  K  C  C  P  N  E  M  V  D  *  R  V  H  W  *  E  *  D  S  I  F  T  D  Y  S  V  G  M  C  F  *  K  A   </second_frame>
            <third_frame>   F  L  G  L  L  D  L  V  S  L  I  T  L  S  D  N  A  D  I  L  L  *  T  G  L  G  S  Y  Q  W  H  V  M  Y  L  L  E  M  L  L  I  P  A  Q  N  F  Y  F  V  C  H  M  *  V  K  R  G  V  V  *  I  I  I  S  K  R  K  I  K  R  S  L  N  V  D  I  Y  R  P  *  A  D  F  S  K  R  C  F  T  I  K  L  E  N  D  *  A  S  A  V  L  M  K  W  W  T  E  E  C  T  G  R  S  E  I  R  S  S  Q  I  I  R  W  G  C  A  S  E  K  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0236E08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="131600" PGL_stop="138640"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="131613" e_stop="131668"/>
            <exon e_start="132530" e_stop="132573"/>
            <exon e_start="134885" e_stop="135064"/>
            <exon e_start="136219" e_stop="136281"/>
            <exon e_start="136473" e_stop="136512"/>
            <exon e_start="138370" e_stop="138640"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.683" acc_prob="0.796" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.876" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.892" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="131613" e_stop="131668" e_length="56"/>
          </exon>
          <intron i_serial="1" don_prob="0.683" acc_prob="0.796">
            <gDNA_intron_boundary i_start="131669" i_stop="132529" i_length="861"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="132530" e_stop="132573" e_length="44"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="132574" i_stop="134884" i_length="2311"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="134885" e_stop="135064" e_length="180"/>
          </exon>
          <intron i_serial="3" don_prob="0.876" acc_prob="0.997">
            <gDNA_intron_boundary i_start="135065" i_stop="136218" i_length="1154"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="136219" e_stop="136281" e_length="63"/>
          </exon>
          <intron i_serial="4" don_prob="0.980" acc_prob="0.892">
            <gDNA_intron_boundary i_start="136282" i_stop="136472" i_length="191"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="136473" e_stop="136512" e_length="40"/>
          </exon>
          <intron i_serial="5" don_prob="0.952" acc_prob="0.000">
            <gDNA_intron_boundary i_start="136513" i_stop="138369" i_length="1857"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="138370" e_stop="138640" e_length="271"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131613" stop="131668"/>
              <exon start="132530" stop="132573"/>
              <exon start="134885" stop="135064"/>
              <exon start="136219" stop="136281"/>
              <exon start="136473" stop="136512"/>
              <exon start="138370" stop="138640"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131613" stop="131668"/>
              <exon start="132530" stop="132573"/>
              <exon start="134885" stop="135064"/>
              <exon start="136219" stop="136281"/>
              <exon start="136473" stop="136512"/>
              <exon start="138370" stop="138556"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392900" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131614" stop="131668"/>
              <exon start="132530" stop="132573"/>
              <exon start="134885" stop="135064"/>
              <exon start="136219" stop="136281"/>
              <exon start="136473" stop="136512"/>
              <exon start="138370" stop="138640"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242538" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131614" stop="131668"/>
              <exon start="132530" stop="132573"/>
              <exon start="134885" stop="135064"/>
              <exon start="136219" stop="136281"/>
              <exon start="136473" stop="136512"/>
              <exon start="138370" stop="138637"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368180" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131614" stop="131668"/>
              <exon start="132530" stop="132573"/>
              <exon start="134885" stop="135064"/>
              <exon start="136219" stop="136281"/>
              <exon start="136473" stop="136512"/>
              <exon start="138370" stop="138534"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242932" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131614" stop="131668"/>
              <exon start="132530" stop="132573"/>
              <exon start="134885" stop="135064"/>
              <exon start="136219" stop="136281"/>
              <exon start="136473" stop="136512"/>
              <exon start="138370" stop="138467"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244714" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131614" stop="131668"/>
              <exon start="132530" stop="132573"/>
              <exon start="134885" stop="135064"/>
              <exon start="136219" stop="136281"/>
              <exon start="136473" stop="136512"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240191" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131623" stop="131668"/>
              <exon start="132530" stop="132573"/>
              <exon start="134885" stop="135064"/>
              <exon start="136219" stop="136281"/>
              <exon start="136473" stop="136512"/>
              <exon start="138370" stop="138640"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368179" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT : GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG : GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT : GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT : AACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG : CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTCTGTTCCTCTA</gDNA_template>
            <first_frame> R  R  I  *  S  G  A  Q  C  I  *  T  D  S  T  N  K  C  M :   H  *  F  N  *  C  G  P  V  R  I  S  S  T   : G  D  Q  L  L  F  L  L  S  T  W  V  L  C  L  S  R  L  L  S  *  V  H  *  V  G  V  P  P  R  H  G  M  N  S  I  V  M  K  S  T  *  S  V  L  Q  N  D  *  D  H  P  Y  P  S  V  *  K  L  S   : C  G  S  V  Y  F  G  S  *  S  N  L  C  G  P  V  R  I  S  S  T   : *  P  E  G  M  K  P  K  A  P  N  E  I  R :   I  L  *  H  P  M  E  G  A  E  T  T  L  D  H  E  S  G  A  G  I  L  S  D  L  L  P  S  V  A  I  L  V  A  *  Y  S  D  S  I  H  W  F  F  L  R  S  L  H  C  N  N  I  S  F  H  K  C  T  T  V  N  C  K  K  M  *  S  H  L  F  L  N  R  D  L  Y  H  V  S  I  I  V  L  T  Y  S  V  P  L </first_frame>
            <second_frame>  G  E  S  D  L  E  H  N  A  S  K  Q  I  Q  Q  I  N  A   : C  I  N  S  I  D  V  D  L  *  E  F  L  Q  Q  :  E  T  N  Y  C  F  S  C  Q  L  G  C  S  A  *  A  D  C  *  V  R  F  I  E  *  G  F  L  Q  G  M  A  *  I  A  S  S  *  N  Q  P  K  A  F  C  R  T  T  K  I  I  R  I  L  V  S  K  N  S  R  :  V  V  P  C  I  L  G  V  S  P  T  Y  V  D  L  *  E  F  L  R  H  :  N  R  R  G  *  N  R  R  L  P  M  R  F   : A  F  S  N  I  Q  W  K  E  R  K  P  H  W  I  M  N  Q  V  L  E  Y  F  L  I  Y  C  H  L  *  L  F  *  *  L  S  I  A  I  P  Y  I  G  F  F  Y  G  V  Y  I  A  I  T  F  L  F  I  N  V  L  L  L  I  A  K  R  C  N  L  T  Y  S  *  I  E  I  C  I  M  Y  Q  L  *  Y  S  H  T  L  F  L   </second_frame>
            <third_frame>   E  N  L  I  W  S  T  M  H  L  N  R  F  N  K  *  M  H  :  A  L  I  Q  L  M  W  T  C  K  N  F  F  N  R :   R  P  T  T  V  S  L  V  N  L  G  A  L  L  E  Q  I  A  K  L  G  S  L  S  R  G  S  S  K  A  W  H  E  *  H  R  H  E  I  N  L  K  R  F  A  E  R  L  R  S  S  V  S  *  C  L  K  T  L  V :   W  F  R  V  F  W  E  L  V  Q  L  M  W  T  C  K  N  F  F  D  I :   T  G  G  D  E  T  E  G  S  Q  *  D  S  :  H  S  L  T  S  N  G  R  S  G  N  H  T  G  S  *  I  R  C  W  N  T  F  *  F  T  A  I  C  S  Y  F  S  S  L  V  *  R  F  H  T  L  V  F  F  T  E  F  T  L  Q  *  H  F  F  S  *  M  Y  Y  C  *  L  Q  K  D  V  I  S  L  I  P  E  *  R  S  V  S  C  I  N  Y  S  T  H  I  L  C  S  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0236E08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="131600" e_stop="131668"/>
            <exon e_start="132530" e_stop="132573"/>
            <exon e_start="134554" e_stop="134634"/>
            <exon e_start="134885" e_stop="135064"/>
            <exon e_start="136219" e_stop="136281"/>
            <exon e_start="136466" e_stop="136512"/>
            <exon e_start="138370" e_stop="138624"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.683" acc_prob="0.796" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.901" e_score="1.000"/>
          <exon-intron don_prob="0.855" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.876" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="131600" e_stop="131668" e_length="69"/>
          </exon>
          <intron i_serial="1" don_prob="0.683" acc_prob="0.796">
            <gDNA_intron_boundary i_start="131669" i_stop="132529" i_length="861"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="132530" e_stop="132573" e_length="44"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.901">
            <gDNA_intron_boundary i_start="132574" i_stop="134553" i_length="1980"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="134554" e_stop="134634" e_length="81"/>
          </exon>
          <intron i_serial="3" don_prob="0.855" acc_prob="0.998">
            <gDNA_intron_boundary i_start="134635" i_stop="134884" i_length="250"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="134885" e_stop="135064" e_length="180"/>
          </exon>
          <intron i_serial="4" don_prob="0.876" acc_prob="0.997">
            <gDNA_intron_boundary i_start="135065" i_stop="136218" i_length="1154"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="136219" e_stop="136281" e_length="63"/>
          </exon>
          <intron i_serial="5" don_prob="0.980" acc_prob="0.000">
            <gDNA_intron_boundary i_start="136282" i_stop="136465" i_length="184"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="136466" e_stop="136512" e_length="47"/>
          </exon>
          <intron i_serial="6" don_prob="0.952" acc_prob="0.000">
            <gDNA_intron_boundary i_start="136513" i_stop="138369" i_length="1857"/>
          </intron>
          <exon e_serial="7" e_score="0.996">
            <gDNA_exon_boundary e_start="138370" e_stop="138624" e_length="255"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131600" stop="131668"/>
              <exon start="132530" stop="132573"/>
              <exon start="134554" stop="134634"/>
              <exon start="134885" stop="135064"/>
              <exon start="136219" stop="136281"/>
              <exon start="136466" stop="136512"/>
              <exon start="138370" stop="138624"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542896" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT : GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG : AGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTG : GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT : GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT : CAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG : CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCAC</gDNA_template>
            <first_frame> I  I  I  L  K  E  N  L  I  W  S  T  M  H  L  N  R  F  N  K  *  M  H  :  A  L  I  Q  L  M  W  T  C  K  N  F  F  N  R :   V  E  K  I  Q  R  N  E  D  K  Y  N  T  A  T  N  F  G  E  Q  H  N  *  W  I  D  W :   R  P  T  T  V  S  L  V  N  L  G  A  L  L  E  Q  I  A  K  L  G  S  L  S  R  G  S  S  K  A  W  H  E  *  H  R  H  E  I  N  L  K  R  F  A  E  R  L  R  S  S  V  S  *  C  L  K  T  L  V :   W  F  R  V  F  W  E  L  V  Q  L  M  W  T  C  K  N  F  F  D  I :   N  K  N  R  R  G  *  N  R  R  L  P  M  R  F   : A  F  S  N  I  Q  W  K  E  R  K  P  H  W  I  M  N  Q  V  L  E  Y  F  L  I  Y  C  H  L  *  L  F  *  *  L  S  I  A  I  P  Y  I  G  F  F  Y  G  V  Y  I  A  I  T  F  L  F  I  N  V  L  L  L  I  A  K  R  C  N  L  T  Y  S  *  I  E  I  C  I  M  Y  Q  L  *  Y  S  </first_frame>
            <second_frame>  S  S  Y  *  R  R  I  *  S  G  A  Q  C  I  *  T  D  S  T  N  K  C  M :   H  *  F  N  *  C  G  P  V  R  I  S  S  T   : E  W  K  R  F  K  G  M  R  I  N  I  T  Q  L  L  I  L  G  S  S  I  I  D  G  L  I   : G  D  Q  L  L  F  L  L  S  T  W  V  L  C  L  S  R  L  L  S  *  V  H  *  V  G  V  P  P  R  H  G  M  N  S  I  V  M  K  S  T  *  S  V  L  Q  N  D  *  D  H  P  Y  P  S  V  *  K  L  S   : C  G  S  V  Y  F  G  S  *  S  N  L  C  G  P  V  R  I  S  S  T   : S  T  R  T  G  G  D  E  T  E  G  S  Q  *  D  S  :  H  S  L  T  S  N  G  R  S  G  N  H  T  G  S  *  I  R  C  W  N  T  F  *  F  T  A  I  C  S  Y  F  S  S  L  V  *  R  F  H  T  L  V  F  F  T  E  F  T  L  Q  *  H  F  F  S  *  M  Y  Y  C  *  L  Q  K  D  V  I  S  L  I  P  E  *  R  S  V  S  C  I  N  Y  S  T  H </second_frame>
            <third_frame>   H  H  I  E  G  E  S  D  L  E  H  N  A  S  K  Q  I  Q  Q  I  N  A   : C  I  N  S  I  D  V  D  L  *  E  F  L  Q  Q  :  S  G  K  D  S  K  E  *  G  *  I  *  H  S  Y  *  F  W  G  A  A  *  L  M  D  *  L  :  E  T  N  Y  C  F  S  C  Q  L  G  C  S  A  *  A  D  C  *  V  R  F  I  E  *  G  F  L  Q  G  M  A  *  I  A  S  S  *  N  Q  P  K  A  F  C  R  T  T  K  I  I  R  I  L  V  S  K  N  S  R  :  V  V  P  C  I  L  G  V  S  P  T  Y  V  D  L  *  E  F  L  R  H  :  Q  Q  E  P  E  G  M  K  P  K  A  P  N  E  I  R :   I  L  *  H  P  M  E  G  A  E  T  T  L  D  H  E  S  G  A  G  I  L  S  D  L  L  P  S  V  A  I  L  V  A  *  Y  S  D  S  I  H  W  F  F  L  R  S  L  H  C  N  N  I  S  F  H  K  C  T  T  V  N  C  K  K  M  *  S  H  L  F  L  N  R  D  L  Y  H  V  S  I  I  V  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0236E08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 140 chains have been computed
$ 
$ memory statistics:
$ 564808 bytes spliced alignments in total
$ 83 spliced alignments have been stored
$ 6804 bytes was the average size of a spliced alignment
$ 24080 bytes predicted gene locations in total
$ 14 predicted gene locations have been stored
$ 1720 bytes was the average size of a predicted gene location
$ 2 megabytes was the average size of the backtrace matrix
$ 175 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 10:18:03
-->
